Query 007088
Match_columns 618
No_of_seqs 728 out of 5122
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 16:51:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007088.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007088hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 6.1E-55 2.1E-59 442.7 13.8 262 306-590 13-291 (299)
2 4aoj_A High affinity nerve gro 100.0 3.3E-54 1.1E-58 443.3 18.5 261 306-589 41-320 (329)
3 4gt4_A Tyrosine-protein kinase 100.0 2.5E-54 8.6E-59 440.0 15.4 257 307-586 27-304 (308)
4 3omv_A RAF proto-oncogene seri 100.0 1.6E-53 5.4E-58 432.4 19.1 261 306-590 36-302 (307)
5 3hmm_A TGF-beta receptor type- 100.0 6.4E-53 2.2E-57 430.4 19.6 274 306-590 3-299 (303)
6 4b9d_A Serine/threonine-protei 100.0 1.8E-53 6.2E-58 438.1 12.0 249 306-581 24-276 (350)
7 4g3f_A NF-kappa-beta-inducing 100.0 1.4E-52 4.9E-57 429.5 18.2 260 305-591 57-319 (336)
8 4fih_A Serine/threonine-protei 100.0 2.1E-52 7.3E-57 429.4 17.6 248 306-581 74-323 (346)
9 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.2E-52 4E-57 425.1 11.4 248 306-581 32-284 (311)
10 3fpq_A Serine/threonine-protei 100.0 1.2E-51 4E-56 415.7 15.8 243 309-581 29-282 (290)
11 3hyh_A Carbon catabolite-derep 100.0 1.2E-51 4E-56 412.1 15.5 244 306-581 13-262 (275)
12 4ase_A Vascular endothelial gr 100.0 7E-52 2.4E-56 429.4 12.6 270 298-589 56-348 (353)
13 4fie_A Serine/threonine-protei 100.0 1.3E-50 4.5E-55 426.3 21.0 248 306-581 151-400 (423)
14 3ubd_A Ribosomal protein S6 ki 100.0 7.8E-52 2.7E-56 419.0 7.6 241 306-576 24-271 (304)
15 4g31_A Eukaryotic translation 100.0 4.9E-49 1.7E-53 399.9 18.2 252 306-581 5-279 (299)
16 3uim_A Brassinosteroid insensi 100.0 6.9E-48 2.3E-52 398.5 18.3 291 293-586 17-309 (326)
17 4b99_A Mitogen-activated prote 100.0 2.2E-47 7.7E-52 402.4 19.6 263 306-581 54-344 (398)
18 4f9c_A Cell division cycle 7-r 100.0 9E-47 3.1E-51 393.6 21.9 204 302-516 17-251 (361)
19 2qkw_B Protein kinase; three-h 100.0 1.7E-46 5.9E-51 387.2 22.2 288 295-589 28-316 (321)
20 3uto_A Twitchin; kinase, muscl 100.0 8.5E-46 2.9E-50 409.1 15.4 251 305-581 156-410 (573)
21 3v5w_A G-protein coupled recep 100.0 2.3E-45 7.8E-50 403.3 18.2 248 305-581 188-449 (689)
22 2nru_A Interleukin-1 receptor- 100.0 3.3E-43 1.1E-47 360.0 26.3 283 293-588 12-306 (307)
23 4hcu_A Tyrosine-protein kinase 100.0 1.7E-44 5.8E-49 362.5 15.7 257 306-589 10-267 (269)
24 3s95_A LIMK-1, LIM domain kina 100.0 2.4E-43 8.2E-48 361.8 23.4 262 306-590 10-284 (310)
25 3p86_A Serine/threonine-protei 100.0 1.4E-43 4.6E-48 363.5 19.6 262 303-590 34-300 (309)
26 3q4u_A Activin receptor type-1 100.0 1.4E-43 4.8E-48 361.5 19.6 264 305-586 7-300 (301)
27 3sxs_A Cytoplasmic tyrosine-pr 100.0 4E-44 1.4E-48 359.5 14.8 258 305-589 7-265 (268)
28 3fxz_A Serine/threonine-protei 100.0 1.1E-43 3.7E-48 362.2 18.1 249 305-581 19-269 (297)
29 3soc_A Activin receptor type-2 100.0 1E-43 3.5E-48 366.7 18.0 274 305-590 23-320 (322)
30 3kul_A Ephrin type-A receptor 100.0 5.7E-44 1.9E-48 369.0 15.7 261 305-590 48-315 (325)
31 2psq_A Fibroblast growth facto 100.0 1.3E-43 4.3E-48 373.0 18.0 263 305-590 80-366 (370)
32 2izr_A Casein kinase I isoform 100.0 1.9E-43 6.5E-48 365.9 18.3 283 305-607 8-300 (330)
33 3gen_A Tyrosine-protein kinase 100.0 8E-44 2.8E-48 360.2 15.1 259 304-589 22-281 (283)
34 3op5_A Serine/threonine-protei 100.0 2.3E-43 7.7E-48 370.5 17.6 286 304-604 33-345 (364)
35 2c30_A Serine/threonine-protei 100.0 4.6E-42 1.6E-46 354.1 26.2 260 294-581 23-294 (321)
36 2qol_A Ephrin receptor; recept 100.0 1.3E-43 4.4E-48 373.2 14.6 261 305-590 44-311 (373)
37 1qcf_A Haematopoetic cell kina 100.0 1.1E-43 3.8E-48 383.8 13.4 260 304-590 186-446 (454)
38 3cbl_A C-FES, proto-oncogene t 100.0 5.4E-44 1.8E-48 377.0 10.3 260 305-590 113-376 (377)
39 3fe3_A MAP/microtubule affinit 100.0 1.9E-43 6.6E-48 365.2 14.1 246 305-581 14-264 (328)
40 3zgw_A Maternal embryonic leuc 100.0 8.8E-43 3E-47 362.5 18.6 250 304-582 8-261 (347)
41 1csn_A Casein kinase-1; phosph 100.0 1.3E-42 4.3E-47 354.0 19.3 278 305-601 9-296 (298)
42 1o6l_A RAC-beta serine/threoni 100.0 7.8E-43 2.7E-47 361.8 17.8 247 305-581 4-260 (337)
43 3mdy_A Bone morphogenetic prot 100.0 2.7E-42 9.2E-47 357.9 21.8 280 297-591 28-334 (337)
44 1tki_A Titin; serine kinase, m 100.0 2.1E-43 7.1E-48 364.1 13.4 251 305-581 4-257 (321)
45 3ugc_A Tyrosine-protein kinase 100.0 4.2E-43 1.4E-47 357.3 15.4 270 305-590 9-293 (295)
46 3t9t_A Tyrosine-protein kinase 100.0 3.7E-43 1.3E-47 352.0 14.6 257 306-589 8-265 (267)
47 4eqm_A Protein kinase; transfe 100.0 3.7E-43 1.3E-47 357.7 14.4 263 305-591 10-278 (294)
48 3qup_A Tyrosine-protein kinase 100.0 2.2E-43 7.4E-48 364.2 12.4 280 303-605 20-315 (323)
49 3tt0_A Basic fibroblast growth 100.0 9E-43 3.1E-47 368.3 17.2 267 305-594 68-358 (382)
50 4euu_A Serine/threonine-protei 100.0 5.3E-42 1.8E-46 353.3 22.2 274 306-589 9-310 (319)
51 3niz_A Rhodanese family protei 100.0 5.5E-43 1.9E-47 359.4 14.8 262 305-581 20-300 (311)
52 2ivs_A Proto-oncogene tyrosine 100.0 7E-43 2.4E-47 358.6 15.5 262 305-589 22-312 (314)
53 3vhe_A Vascular endothelial gr 100.0 2.3E-43 7.7E-48 369.5 12.0 272 296-589 12-356 (359)
54 2yab_A Death-associated protei 100.0 1.2E-42 4E-47 363.8 16.9 250 305-581 11-272 (361)
55 3poz_A Epidermal growth factor 100.0 8.8E-43 3E-47 360.5 15.8 257 306-589 15-279 (327)
56 3tki_A Serine/threonine-protei 100.0 1.2E-42 4.1E-47 358.7 16.8 252 305-581 6-261 (323)
57 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 4.9E-43 1.7E-47 378.4 14.3 259 305-590 183-442 (452)
58 1opk_A P150, C-ABL, proto-onco 100.0 3.4E-43 1.2E-47 383.7 13.2 259 305-589 219-479 (495)
59 2zv2_A Calcium/calmodulin-depe 100.0 3.1E-42 1E-46 351.5 18.9 248 305-581 12-292 (298)
60 1luf_A Muscle-specific tyrosin 100.0 6.4E-43 2.2E-47 363.6 14.0 268 301-591 42-338 (343)
61 3dtc_A Mitogen-activated prote 100.0 9.8E-43 3.4E-47 349.8 14.8 253 305-586 6-271 (271)
62 1qpc_A LCK kinase; alpha beta 100.0 1.2E-42 4.2E-47 350.8 15.4 259 305-590 12-271 (279)
63 3kfa_A Tyrosine-protein kinase 100.0 5.7E-43 2E-47 354.8 13.1 263 304-592 11-275 (288)
64 1k9a_A Carboxyl-terminal SRC k 100.0 2.5E-42 8.6E-47 372.6 18.5 254 304-589 191-446 (450)
65 4dc2_A Protein kinase C IOTA t 100.0 3.2E-42 1.1E-46 364.0 18.6 250 305-576 51-307 (396)
66 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.9E-42 1.3E-46 356.2 18.7 245 305-581 8-258 (336)
67 1mp8_A Focal adhesion kinase 1 100.0 1.6E-42 5.4E-47 350.6 15.0 257 305-589 14-277 (281)
68 3soa_A Calcium/calmodulin-depe 100.0 2.4E-42 8.3E-47 370.8 17.4 252 304-581 9-267 (444)
69 3l9p_A Anaplastic lymphoma kin 100.0 2.4E-43 8.1E-48 370.6 9.1 264 305-591 70-348 (367)
70 2y0a_A Death-associated protei 100.0 1.8E-42 6.2E-47 357.9 15.3 249 305-581 10-271 (326)
71 3gxj_A TGF-beta receptor type- 100.0 7.5E-44 2.6E-48 363.8 4.8 268 305-590 2-299 (303)
72 3kmu_A ILK, integrin-linked ki 100.0 1.5E-42 5.1E-47 348.1 14.1 251 306-588 10-270 (271)
73 3pls_A Macrophage-stimulating 100.0 7.7E-42 2.6E-46 348.1 19.6 264 307-593 22-292 (298)
74 1ob3_A PFPK5, cell division co 100.0 1.7E-42 5.7E-47 351.7 14.5 261 306-581 2-280 (288)
75 3c0i_A Peripheral plasma membr 100.0 3.8E-42 1.3E-46 359.3 17.5 254 305-581 23-286 (351)
76 2bdw_A Hypothetical protein K1 100.0 2.8E-42 9.6E-47 361.5 15.9 251 304-581 27-284 (362)
77 2eva_A TAK1 kinase - TAB1 chim 100.0 4.8E-42 1.7E-46 351.7 17.3 259 306-592 8-267 (307)
78 1t46_A HOMO sapiens V-KIT hard 100.0 2.1E-42 7.2E-47 354.9 14.6 264 305-590 22-309 (313)
79 3f66_A Hepatocyte growth facto 100.0 6.4E-42 2.2E-46 349.0 17.8 264 305-592 24-295 (298)
80 4hgt_A Casein kinase I isoform 100.0 8.5E-42 2.9E-46 347.3 18.6 280 304-602 7-294 (296)
81 3c1x_A Hepatocyte growth facto 100.0 3.5E-42 1.2E-46 362.1 16.2 263 307-593 90-360 (373)
82 1b6c_B TGF-B superfamily recep 100.0 1.5E-41 5.1E-46 353.2 20.6 278 296-591 32-339 (342)
83 3uzp_A CKI-delta, CKID, casein 100.0 1.5E-41 5.3E-46 345.6 20.3 279 305-602 8-294 (296)
84 3o0g_A Cell division protein k 100.0 4.3E-42 1.5E-46 349.3 16.1 262 306-581 2-282 (292)
85 3g2f_A Bone morphogenetic prot 100.0 1.3E-42 4.5E-47 360.3 12.6 278 305-592 12-322 (336)
86 3lb7_A RAF proto-oncogene seri 100.0 1.2E-41 4E-46 348.8 19.4 263 305-591 35-303 (307)
87 3txo_A PKC-L, NPKC-ETA, protei 100.0 8.2E-43 2.8E-47 364.0 10.9 247 305-581 22-280 (353)
88 3uc3_A Serine/threonine-protei 100.0 3.3E-42 1.1E-46 361.0 15.5 253 305-582 19-275 (361)
89 3kex_A Receptor tyrosine-prote 100.0 1.3E-42 4.4E-47 358.9 12.2 257 306-589 13-277 (325)
90 1rjb_A FL cytokine receptor; k 100.0 2.5E-42 8.6E-47 359.5 13.8 265 304-590 43-336 (344)
91 3a8x_A Protein kinase C IOTA t 100.0 9.1E-42 3.1E-46 355.2 17.9 249 306-576 9-264 (345)
92 2jii_A Serine/threonine-protei 100.0 3.4E-42 1.2E-46 359.8 14.8 281 305-603 41-351 (352)
93 4f0f_A Serine/threonine-protei 100.0 6.8E-42 2.3E-46 346.8 16.5 252 305-586 18-287 (287)
94 3gni_B Strad alpha; kinase fol 100.0 1.1E-41 3.6E-46 361.0 18.3 273 305-582 24-334 (389)
95 4fr4_A YANK1, serine/threonine 100.0 2.9E-41 1E-45 355.4 21.5 247 306-580 15-270 (384)
96 2pvf_A Fibroblast growth facto 100.0 5.4E-42 1.8E-46 355.6 15.3 264 305-591 34-321 (334)
97 2w4o_A Calcium/calmodulin-depe 100.0 7E-42 2.4E-46 356.9 15.9 251 304-581 51-305 (349)
98 1u59_A Tyrosine-protein kinase 100.0 8.7E-42 3E-46 346.2 16.2 261 306-592 9-276 (287)
99 2wqm_A Serine/threonine-protei 100.0 6.4E-42 2.2E-46 351.1 15.3 269 305-595 31-304 (310)
100 1kob_A Twitchin; kinase, intra 100.0 1.1E-41 3.6E-46 359.7 17.4 251 305-581 50-304 (387)
101 3lxp_A Non-receptor tyrosine-p 100.0 1.8E-42 6.3E-47 356.6 11.1 268 308-591 33-313 (318)
102 1fot_A TPK1 delta, CAMP-depend 100.0 3.8E-41 1.3E-45 346.4 20.9 244 305-581 5-258 (318)
103 3qd2_B Eukaryotic translation 100.0 5.8E-42 2E-46 354.3 14.7 253 305-581 5-325 (332)
104 3og7_A AKAP9-BRAF fusion prote 100.0 1.8E-41 6E-46 344.4 17.8 260 305-588 23-288 (289)
105 2h8h_A Proto-oncogene tyrosine 100.0 1.9E-42 6.6E-47 381.2 11.6 259 304-589 265-524 (535)
106 4eut_A Serine/threonine-protei 100.0 1.4E-41 4.7E-46 361.0 17.7 275 305-589 8-310 (396)
107 1fvr_A Tyrosine-protein kinase 100.0 1.3E-41 4.4E-46 351.7 16.8 261 306-592 25-304 (327)
108 3llt_A Serine/threonine kinase 100.0 5E-42 1.7E-46 359.6 13.9 211 293-516 22-263 (360)
109 1xjd_A Protein kinase C, theta 100.0 1.1E-41 3.9E-46 354.0 16.4 248 303-580 14-268 (345)
110 3lzb_A Epidermal growth factor 100.0 7.5E-42 2.6E-46 353.5 14.7 257 306-589 15-279 (327)
111 1p4o_A Insulin-like growth fac 100.0 1.6E-42 5.3E-47 357.5 9.5 268 299-589 18-300 (322)
112 3hko_A Calcium/calmodulin-depe 100.0 3.8E-42 1.3E-46 358.2 12.4 263 301-581 21-330 (345)
113 3v8s_A RHO-associated protein 100.0 1.4E-42 5E-47 368.5 9.3 258 298-581 61-329 (410)
114 3a62_A Ribosomal protein S6 ki 100.0 9.5E-42 3.3E-46 352.7 15.1 247 305-581 16-276 (327)
115 4e5w_A Tyrosine-protein kinase 100.0 1.4E-41 4.7E-46 347.1 16.1 265 306-587 21-301 (302)
116 2ozo_A Tyrosine-protein kinase 100.0 2.2E-41 7.6E-46 378.2 19.2 262 308-595 337-605 (613)
117 3lxl_A Tyrosine-protein kinase 100.0 1.3E-42 4.4E-47 359.2 8.1 270 306-592 23-307 (327)
118 2i0e_A Protein kinase C-beta I 100.0 9.9E-42 3.4E-46 355.6 14.6 247 305-581 19-276 (353)
119 3kn6_A Ribosomal protein S6 ki 100.0 1.3E-41 4.3E-46 351.4 15.1 250 311-581 16-270 (325)
120 1rdq_E PKA C-alpha, CAMP-depen 100.0 1E-41 3.5E-46 355.3 14.6 244 305-581 40-293 (350)
121 1nxk_A MAP kinase-activated pr 100.0 6.2E-41 2.1E-45 356.0 20.8 252 306-582 61-322 (400)
122 3cok_A Serine/threonine-protei 100.0 3.4E-41 1.2E-45 340.0 17.9 248 305-581 10-262 (278)
123 4aw2_A Serine/threonine-protei 100.0 3E-42 1E-46 368.9 10.6 262 297-581 65-338 (437)
124 2xir_A Vascular endothelial gr 100.0 6.9E-42 2.3E-46 351.5 12.6 273 297-591 18-313 (316)
125 2pmi_A Negative RE, cyclin-dep 100.0 3.3E-41 1.1E-45 347.1 17.8 265 305-581 4-293 (317)
126 1mqb_A Ephrin type-A receptor 100.0 2E-41 6.7E-46 351.3 16.1 261 306-591 44-312 (333)
127 1xbb_A Tyrosine-protein kinase 100.0 8.3E-42 2.9E-46 347.0 12.9 259 305-590 15-281 (291)
128 3brb_A Proto-oncogene tyrosine 100.0 3.8E-41 1.3E-45 345.8 17.9 269 299-590 27-310 (313)
129 4fvq_A Tyrosine-protein kinase 100.0 1.8E-41 6.2E-46 343.9 15.3 252 306-590 8-277 (289)
130 1byg_A CSK, protein (C-termina 100.0 1E-41 3.5E-46 344.0 13.0 253 305-589 20-274 (278)
131 2buj_A Serine/threonine-protei 100.0 1.4E-41 4.6E-46 349.7 14.2 265 305-588 28-306 (317)
132 2x4f_A Myosin light chain kina 100.0 9.5E-42 3.3E-46 358.9 13.1 247 309-581 92-342 (373)
133 3cc6_A Protein tyrosine kinase 100.0 1.5E-41 5.2E-46 343.2 14.0 257 305-589 11-274 (281)
134 3fdn_A Serine/threonine-protei 100.0 9.2E-41 3.2E-45 337.1 19.5 246 305-582 8-258 (279)
135 2eue_A Carbon catabolite derep 100.0 8.8E-41 3E-45 336.5 19.2 244 306-581 13-262 (275)
136 2r5t_A Serine/threonine-protei 100.0 5.2E-42 1.8E-46 360.3 10.6 248 305-582 37-290 (373)
137 3g33_A Cell division protein k 100.0 1.9E-41 6.4E-46 347.4 14.4 263 304-581 7-296 (308)
138 3is5_A Calcium-dependent prote 100.0 9E-41 3.1E-45 338.5 19.2 251 306-581 22-278 (285)
139 4agu_A Cyclin-dependent kinase 100.0 6.2E-41 2.1E-45 343.8 18.0 265 306-581 3-284 (311)
140 3ork_A Serine/threonine protei 100.0 2.2E-41 7.4E-46 347.5 14.5 261 305-588 11-281 (311)
141 2y94_A 5'-AMP-activated protei 100.0 2E-40 6.7E-45 358.4 22.5 245 306-581 16-266 (476)
142 2yex_A Serine/threonine-protei 100.0 1.1E-40 3.7E-45 335.8 19.1 252 305-581 6-261 (276)
143 3p1a_A MYT1 kinase, membrane-a 100.0 2.2E-41 7.7E-46 347.4 14.4 243 306-581 57-304 (311)
144 3dbq_A Dual specificity protei 100.0 1.5E-41 5E-46 353.7 13.1 251 305-582 8-274 (343)
145 3kk8_A Calcium/calmodulin depe 100.0 3.5E-41 1.2E-45 341.0 15.3 250 305-581 5-261 (284)
146 2h34_A Serine/threonine-protei 100.0 2.3E-40 8E-45 339.5 21.7 260 305-590 33-298 (309)
147 4ejn_A RAC-alpha serine/threon 100.0 5.2E-41 1.8E-45 362.2 17.4 247 305-581 147-404 (446)
148 2i1m_A Macrophage colony-stimu 100.0 5.7E-42 1.9E-46 355.2 9.3 264 304-589 44-327 (333)
149 2a2a_A Death-associated protei 100.0 3.1E-40 1.1E-44 340.4 22.3 250 305-581 11-272 (321)
150 3dls_A PAS domain-containing s 100.0 2.1E-41 7.3E-46 351.2 13.6 242 304-582 22-275 (335)
151 3c4z_A Rhodopsin kinase; Ser/T 100.0 6.7E-41 2.3E-45 366.3 17.7 250 305-576 184-438 (543)
152 3lm5_A Serine/threonine-protei 100.0 6.1E-41 2.1E-45 346.7 16.3 262 295-581 17-287 (327)
153 2v62_A Serine/threonine-protei 100.0 4.9E-41 1.7E-45 350.0 15.6 268 305-588 36-328 (345)
154 2a19_B Interferon-induced, dou 100.0 2.5E-41 8.6E-46 341.7 12.8 252 304-591 9-277 (284)
155 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.1E-40 3.9E-45 350.0 18.1 257 304-590 63-341 (365)
156 2vd5_A DMPK protein; serine/th 100.0 1.3E-41 4.3E-46 361.5 10.9 262 296-581 51-327 (412)
157 2w1i_A JAK2; chromosomal rearr 100.0 5.1E-41 1.7E-45 347.1 15.1 270 305-590 40-324 (326)
158 2zmd_A Dual specificity protei 100.0 3.8E-41 1.3E-45 356.6 14.3 250 306-582 56-321 (390)
159 1u5q_A Serine/threonine protei 100.0 3.5E-41 1.2E-45 351.3 13.7 246 305-582 53-306 (348)
160 3f3z_A Calcium/calmodulin-depe 100.0 4.6E-40 1.6E-44 331.6 21.3 248 305-581 8-261 (277)
161 2acx_A G protein-coupled recep 100.0 7.4E-41 2.5E-45 366.8 16.5 252 305-581 183-444 (576)
162 2qr7_A Ribosomal protein S6 ki 100.0 4.4E-41 1.5E-45 349.6 14.0 252 304-581 20-277 (342)
163 3i6u_A CDS1, serine/threonine- 100.0 1.2E-40 4E-45 356.3 17.5 251 304-581 133-399 (419)
164 3bhy_A Death-associated protei 100.0 7.9E-40 2.7E-44 330.8 22.4 257 306-589 5-275 (283)
165 3ttj_A Mitogen-activated prote 100.0 4.1E-40 1.4E-44 356.2 21.4 258 305-581 61-355 (464)
166 2ac3_A MAP kinase-interacting 100.0 3.7E-41 1.3E-45 346.3 12.6 262 306-581 12-295 (316)
167 2w5a_A Serine/threonine-protei 100.0 1.3E-41 4.5E-46 343.2 8.9 255 305-584 5-270 (279)
168 3ll6_A Cyclin G-associated kin 100.0 7.1E-41 2.4E-45 346.9 14.6 264 305-594 27-314 (337)
169 1x8b_A WEE1HU, WEE1-like prote 100.0 6.5E-41 2.2E-45 339.1 14.0 246 304-581 9-279 (289)
170 3a7i_A MST3 kinase, serine/thr 100.0 1.5E-40 5E-45 339.8 16.7 247 306-582 22-271 (303)
171 4fl3_A Tyrosine-protein kinase 100.0 7.4E-41 2.5E-45 374.9 15.2 251 312-589 375-632 (635)
172 2vgo_A Serine/threonine-protei 100.0 5.1E-40 1.7E-44 332.6 19.9 244 306-581 14-262 (284)
173 2yfx_A Tyrosine-protein kinase 100.0 2.8E-41 9.5E-46 349.2 10.7 263 305-590 29-306 (327)
174 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.9E-41 6.4E-46 350.8 9.4 263 303-581 31-318 (329)
175 1ua2_A CAK, cell division prot 100.0 7E-41 2.4E-45 349.0 13.7 264 303-581 7-291 (346)
176 3oz6_A Mitogen-activated prote 100.0 2E-40 6.9E-45 351.1 17.5 204 304-516 7-235 (388)
177 2jam_A Calcium/calmodulin-depe 100.0 1.3E-40 4.4E-45 340.5 15.4 249 305-581 8-261 (304)
178 3sv0_A Casein kinase I-like; t 100.0 3.3E-40 1.1E-44 357.3 19.3 278 305-601 6-291 (483)
179 4aaa_A Cyclin-dependent kinase 100.0 8.5E-41 2.9E-45 346.2 14.0 266 305-581 24-306 (331)
180 2rku_A Serine/threonine-protei 100.0 3.5E-40 1.2E-44 335.5 18.1 248 305-582 14-266 (294)
181 2x7f_A TRAF2 and NCK-interacti 100.0 6.3E-41 2.1E-45 346.2 12.4 261 295-581 13-286 (326)
182 1vzo_A Ribosomal protein S6 ki 100.0 7.6E-41 2.6E-45 349.9 13.1 253 305-582 53-322 (355)
183 2pml_X PFPK7, Ser/Thr protein 100.0 7.3E-41 2.5E-45 348.9 12.6 258 305-581 30-322 (348)
184 2owb_A Serine/threonine-protei 100.0 3.3E-40 1.1E-44 342.4 17.4 247 305-581 40-291 (335)
185 1t4h_A Serine/threonine-protei 100.0 1.1E-39 3.7E-44 331.2 20.8 245 307-581 27-282 (290)
186 3mtl_A Cell division protein k 100.0 2.1E-40 7.1E-45 342.2 15.5 261 306-581 2-281 (324)
187 1wak_A Serine/threonine-protei 100.0 3.2E-40 1.1E-44 350.2 16.8 264 305-581 36-391 (397)
188 3rp9_A Mitogen-activated prote 100.0 3.9E-40 1.3E-44 356.7 17.7 196 305-508 52-280 (458)
189 3pg1_A Mitogen-activated prote 100.0 1E-40 3.6E-45 349.8 12.8 269 296-581 12-316 (362)
190 2r3i_A Cell division protein k 100.0 7.8E-40 2.7E-44 333.6 18.8 262 306-581 3-283 (299)
191 3mi9_A Cell division protein k 100.0 6.3E-40 2.2E-44 342.4 18.3 265 305-581 16-311 (351)
192 2y7j_A Phosphorylase B kinase 100.0 8.1E-40 2.8E-44 343.4 19.1 256 299-581 87-359 (365)
193 3mwu_A Calmodulin-domain prote 100.0 2.8E-40 9.4E-45 360.5 16.1 251 304-582 20-277 (486)
194 2h6d_A 5'-AMP-activated protei 100.0 1.7E-39 5.8E-44 327.1 20.4 246 305-581 10-261 (276)
195 3nsz_A CK II alpha, casein kin 100.0 6.9E-40 2.4E-44 338.9 17.7 257 305-581 35-319 (330)
196 3eb0_A Putative uncharacterize 100.0 2E-40 6.7E-45 350.6 13.5 274 302-591 3-333 (383)
197 3nyv_A Calmodulin-domain prote 100.0 6.7E-40 2.3E-44 357.4 18.1 249 305-581 25-281 (484)
198 3q5i_A Protein kinase; CDPK, m 100.0 1.2E-39 4E-44 357.1 20.1 250 304-581 34-301 (504)
199 2ycf_A Serine/threonine-protei 100.0 7.8E-40 2.7E-44 337.5 17.4 250 305-581 9-274 (322)
200 3kvw_A DYRK2, dual specificity 100.0 1.2E-40 4.3E-45 357.0 11.4 199 305-516 96-303 (429)
201 2clq_A Mitogen-activated prote 100.0 5.1E-40 1.8E-44 334.1 15.4 251 307-581 23-278 (295)
202 3byv_A Rhoptry kinase; malaria 100.0 3.7E-41 1.3E-45 355.4 7.2 249 304-587 71-367 (377)
203 3eqc_A Dual specificity mitoge 100.0 6.8E-40 2.3E-44 343.4 16.7 199 305-515 32-233 (360)
204 3fme_A Dual specificity mitoge 100.0 2E-40 6.8E-45 336.3 12.2 253 305-581 6-266 (290)
205 3e3p_A Protein kinase, putativ 100.0 4.1E-40 1.4E-44 344.9 14.5 270 299-581 16-314 (360)
206 1u46_A ACK-1, activated CDC42 100.0 1.1E-40 3.6E-45 338.5 9.6 259 305-588 17-284 (291)
207 2wtk_C Serine/threonine-protei 100.0 6.2E-39 2.1E-43 327.9 22.6 251 305-582 4-264 (305)
208 3lij_A Calcium/calmodulin depe 100.0 3.6E-40 1.2E-44 360.2 14.1 249 305-581 36-291 (494)
209 3com_A Serine/threonine-protei 100.0 6E-40 2E-44 337.0 14.8 251 304-581 27-278 (314)
210 3pfq_A PKC-B, PKC-beta, protei 100.0 2.3E-40 7.9E-45 373.4 12.5 243 304-576 339-587 (674)
211 3q60_A ROP5B; pseudokinase, tr 100.0 2E-40 6.8E-45 349.0 10.8 252 305-581 61-352 (371)
212 1cm8_A Phosphorylated MAP kina 100.0 9.9E-40 3.4E-44 342.9 15.9 256 305-581 24-307 (367)
213 1z57_A Dual specificity protei 100.0 2.8E-39 9.5E-44 335.1 19.0 259 305-581 13-328 (339)
214 2y4i_B KSR2, HKSR2, kinase sup 100.0 7.1E-40 2.4E-44 337.1 14.3 266 303-594 30-308 (319)
215 1phk_A Phosphorylase kinase; g 100.0 6.3E-40 2.1E-44 334.1 13.5 251 304-581 15-283 (298)
216 3an0_A Dual specificity mitoge 100.0 3.3E-40 1.1E-44 342.9 11.6 254 304-581 49-310 (340)
217 2xrw_A Mitogen-activated prote 100.0 2.1E-39 7.1E-44 341.2 17.7 255 305-581 24-318 (371)
218 2j7t_A Serine/threonine-protei 100.0 1.2E-39 4.1E-44 332.7 15.1 251 305-581 18-275 (302)
219 4e7w_A Glycogen synthase kinas 100.0 3.1E-40 1.1E-44 350.2 11.1 261 305-581 39-321 (394)
220 2vwi_A Serine/threonine-protei 100.0 9.7E-40 3.3E-44 333.3 14.1 264 304-581 13-287 (303)
221 1j1b_A Glycogen synthase kinas 100.0 7.5E-40 2.6E-44 350.1 13.9 260 306-581 54-336 (420)
222 1zy4_A Serine/threonine-protei 100.0 1.6E-39 5.4E-44 331.4 15.6 255 304-581 4-283 (303)
223 1q8y_A SR protein kinase; tran 100.0 1.8E-39 6.1E-44 341.7 16.3 264 306-581 19-333 (373)
224 3n9x_A Phosphotransferase; mal 100.0 2.7E-39 9.3E-44 347.2 17.9 201 305-513 25-253 (432)
225 2j0j_A Focal adhesion kinase 1 100.0 9.6E-40 3.3E-44 367.2 14.8 259 303-589 387-652 (656)
226 3qyz_A Mitogen-activated prote 100.0 3.8E-39 1.3E-43 338.3 18.4 263 304-581 25-313 (364)
227 3cek_A Dual specificity protei 100.0 3.3E-40 1.1E-44 338.9 9.5 257 299-582 21-293 (313)
228 2vx3_A Dual specificity tyrosi 100.0 4.8E-39 1.6E-43 339.8 18.5 203 303-516 51-262 (382)
229 1blx_A Cyclin-dependent kinase 100.0 5.8E-40 2E-44 338.8 11.2 263 304-581 9-296 (326)
230 2fst_X Mitogen-activated prote 100.0 2.4E-39 8.3E-44 339.8 16.0 257 305-581 28-311 (367)
231 3fhr_A MAP kinase-activated pr 100.0 2.2E-39 7.7E-44 336.2 14.8 252 305-581 27-287 (336)
232 2wei_A Calmodulin-domain prote 100.0 1.4E-38 4.9E-43 322.5 19.6 251 303-581 19-276 (287)
233 3rgf_A Cyclin-dependent kinase 100.0 6.9E-39 2.4E-43 341.3 17.5 205 306-516 20-240 (405)
234 2b9h_A MAP kinase FUS3, mitoge 100.0 8.9E-39 3.1E-43 333.8 17.9 264 305-581 10-305 (353)
235 4exu_A Mitogen-activated prote 100.0 1E-38 3.5E-43 335.9 18.2 256 305-581 41-323 (371)
236 2rio_A Serine/threonine-protei 100.0 7.2E-39 2.5E-43 343.9 16.3 255 307-581 16-295 (434)
237 2eu9_A Dual specificity protei 100.0 1.7E-38 5.7E-43 331.5 18.6 259 305-581 18-333 (355)
238 2i6l_A Mitogen-activated prote 100.0 1.1E-38 3.7E-43 328.0 15.6 263 305-581 10-305 (320)
239 3aln_A Dual specificity mitoge 100.0 1.3E-38 4.6E-43 329.0 16.1 255 306-581 22-285 (327)
240 3coi_A Mitogen-activated prote 100.0 9.7E-38 3.3E-42 326.1 20.1 256 305-581 23-305 (353)
241 2iwi_A Serine/threonine-protei 100.0 5.6E-39 1.9E-43 329.5 10.0 244 300-581 25-283 (312)
242 3a99_A Proto-oncogene serine/t 100.0 6.9E-39 2.3E-43 330.2 9.6 242 302-581 39-293 (320)
243 3p23_A Serine/threonine-protei 100.0 9.8E-38 3.3E-42 334.4 17.1 251 305-581 23-283 (432)
244 2dyl_A Dual specificity mitoge 100.0 5.1E-38 1.7E-42 322.9 12.6 250 305-581 24-283 (318)
245 3qa8_A MGC80376 protein; kinas 100.0 4.6E-38 1.6E-42 348.1 12.3 268 305-588 13-309 (676)
246 3uqc_A Probable conserved tran 100.0 9.5E-37 3.3E-41 308.9 19.3 231 306-589 31-266 (286)
247 2pzi_A Probable serine/threoni 100.0 4.7E-37 1.6E-41 348.3 18.2 239 305-587 79-327 (681)
248 3dzo_A Rhoptry kinase domain; 100.0 3.4E-37 1.2E-41 328.7 11.4 242 304-580 76-362 (413)
249 3m2w_A MAP kinase-activated pr 100.0 1.6E-36 5.5E-41 309.3 15.5 227 305-581 16-256 (299)
250 2vuw_A Serine/threonine-protei 100.0 6.2E-37 2.1E-41 317.8 5.6 237 305-580 19-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 8.7E-31 3E-35 289.2 3.6 183 314-511 242-437 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 3E-27 1E-31 259.4 5.4 187 309-513 339-539 (540)
253 1ogq_A PGIP-2, polygalacturona 99.9 6.6E-26 2.3E-30 232.3 13.1 175 31-212 2-185 (313)
254 1zar_A RIO2 kinase; serine kin 99.9 5E-24 1.7E-28 214.6 11.5 142 297-457 81-241 (282)
255 4ecn_A Leucine-rich repeat pro 99.9 4E-24 1.4E-28 245.3 9.6 174 32-214 266-561 (876)
256 4eco_A Uncharacterized protein 99.9 1.5E-23 5.2E-28 235.6 9.9 174 33-214 28-318 (636)
257 3rgz_A Protein brassinosteroid 99.9 4.1E-23 1.4E-27 237.2 13.1 174 30-213 7-212 (768)
258 4fcg_A Uncharacterized protein 99.8 6.4E-22 2.2E-26 204.0 6.0 178 30-213 22-218 (328)
259 3rgz_A Protein brassinosteroid 99.8 2.7E-21 9.3E-26 222.1 10.1 138 87-225 613-751 (768)
260 3e6j_A Variable lymphocyte rec 99.8 8.1E-20 2.8E-24 178.1 13.3 151 65-217 15-175 (229)
261 1zth_A RIO1 serine protein kin 99.8 5.1E-20 1.7E-24 182.9 9.2 145 299-459 40-220 (258)
262 2o6s_A Variable lymphocyte rec 99.8 9.4E-19 3.2E-23 167.8 13.7 152 65-217 3-164 (208)
263 2v9t_B SLIT homolog 2 protein 99.8 8.1E-19 2.8E-23 169.9 12.7 151 65-217 7-168 (220)
264 2v70_A SLIT-2, SLIT homolog 2 99.8 6.8E-19 2.3E-23 170.4 11.0 152 65-217 7-169 (220)
265 1ogq_A PGIP-2, polygalacturona 99.8 4.5E-19 1.5E-23 181.4 8.0 137 84-223 176-313 (313)
266 1w8a_A SLIT protein; signaling 99.7 1.2E-18 4.2E-23 164.9 8.1 152 66-218 5-166 (192)
267 2o6r_A Variable lymphocyte rec 99.7 1.7E-17 5.8E-22 154.8 10.6 131 66-197 4-142 (177)
268 3m19_A Variable lymphocyte rec 99.7 4E-17 1.4E-21 161.3 12.5 130 82-212 35-166 (251)
269 4gyi_A RIO2 kinase; protein ki 99.7 1.2E-16 4.1E-21 165.2 13.4 146 299-459 88-266 (397)
270 1w8a_A SLIT protein; signaling 99.7 1.1E-16 3.7E-21 151.5 11.4 130 85-217 11-142 (192)
271 2o6q_A Variable lymphocyte rec 99.7 4.5E-16 1.5E-20 155.5 13.4 130 82-212 37-168 (270)
272 2wfh_A SLIT homolog 2 protein 99.6 4.5E-16 1.5E-20 147.3 10.8 126 87-217 15-142 (193)
273 2wfh_A SLIT homolog 2 protein 99.6 4.4E-16 1.5E-20 147.3 10.7 129 65-195 6-142 (193)
274 3rfs_A Internalin B, repeat mo 99.6 7.7E-16 2.6E-20 154.0 13.0 137 81-218 84-222 (272)
275 4g8a_A TOLL-like receptor 4; l 99.6 6.2E-16 2.1E-20 173.2 11.5 140 73-213 35-185 (635)
276 3v47_A TOLL-like receptor 5B a 99.6 6.5E-16 2.2E-20 166.2 10.5 147 67-213 6-166 (455)
277 2xot_A Amphoterin-induced prot 99.6 1.7E-15 5.9E-20 157.9 12.1 148 64-212 13-174 (361)
278 2v70_A SLIT-2, SLIT homolog 2 99.6 1.7E-15 5.9E-20 146.4 10.5 115 81-196 56-170 (220)
279 1p9a_G Platelet glycoprotein I 99.6 3.1E-15 1.1E-19 151.0 12.2 135 81-217 76-211 (290)
280 4fcg_A Uncharacterized protein 99.6 1.6E-15 5.6E-20 155.9 9.8 131 82-215 150-291 (328)
281 3m19_A Variable lymphocyte rec 99.6 4.2E-15 1.4E-19 146.7 12.3 135 81-216 58-194 (251)
282 2o6q_A Variable lymphocyte rec 99.6 5.7E-15 2E-19 147.4 12.9 135 82-217 85-221 (270)
283 3v47_A TOLL-like receptor 5B a 99.6 2.5E-15 8.6E-20 161.6 11.0 136 82-218 275-412 (455)
284 2v9t_B SLIT homolog 2 protein 99.6 4E-15 1.4E-19 143.8 10.4 113 81-194 55-167 (220)
285 2z66_A Variable lymphocyte rec 99.6 3.6E-15 1.2E-19 151.7 10.2 134 82-216 126-263 (306)
286 1ozn_A Reticulon 4 receptor; N 99.6 2.1E-15 7.2E-20 151.8 8.4 133 83-216 106-240 (285)
287 3oja_A Leucine-rich immune mol 99.6 1.9E-15 6.4E-20 164.1 8.2 143 69-216 109-252 (487)
288 3g39_A Variable lymphocyte rec 99.6 6.4E-15 2.2E-19 136.3 10.4 108 86-197 13-120 (170)
289 4eco_A Uncharacterized protein 99.6 6.7E-16 2.3E-20 173.3 4.0 142 69-212 193-364 (636)
290 2o6r_A Variable lymphocyte rec 99.6 1.2E-14 4.2E-19 135.2 11.7 128 85-216 10-139 (177)
291 1ozn_A Reticulon 4 receptor; N 99.6 1.5E-14 5E-19 145.6 13.0 131 81-212 31-164 (285)
292 2je0_A Acidic leucine-rich nuc 99.6 1.6E-15 5.5E-20 137.0 5.2 112 82-196 17-130 (149)
293 2ell_A Acidic leucine-rich nuc 99.6 2.1E-15 7.2E-20 139.1 6.0 130 81-213 23-159 (168)
294 2z81_A CD282 antigen, TOLL-lik 99.6 2.9E-15 1E-19 165.1 7.9 144 68-213 3-160 (549)
295 3vq2_A TLR4, TOLL-like recepto 99.6 5.3E-15 1.8E-19 165.2 9.7 135 82-218 424-562 (606)
296 2z66_A Variable lymphocyte rec 99.5 4.5E-15 1.5E-19 151.0 8.1 144 66-212 4-161 (306)
297 3vq2_A TLR4, TOLL-like recepto 99.5 1.4E-14 4.8E-19 161.7 12.8 131 81-212 31-164 (606)
298 4g8a_A TOLL-like receptor 4; l 99.5 7.7E-15 2.6E-19 164.3 10.6 135 82-217 445-583 (635)
299 2xot_A Amphoterin-induced prot 99.5 4.6E-15 1.6E-19 154.7 7.9 135 81-217 63-205 (361)
300 2z62_A TOLL-like receptor 4, v 99.5 1.8E-14 6.2E-19 144.2 11.9 130 82-212 28-160 (276)
301 4b8c_D Glucose-repressible alc 99.5 4.5E-15 1.5E-19 168.6 7.9 109 84-197 226-334 (727)
302 3rfs_A Internalin B, repeat mo 99.5 1.4E-14 4.7E-19 144.8 10.5 118 81-199 108-225 (272)
303 2o6s_A Variable lymphocyte rec 99.5 1.1E-14 3.8E-19 139.3 9.3 117 81-198 51-167 (208)
304 1dce_A Protein (RAB geranylger 99.5 7.9E-15 2.7E-19 161.6 9.3 110 83-198 442-552 (567)
305 3t6q_A CD180 antigen; protein- 99.5 2.2E-14 7.6E-19 160.1 12.1 141 71-212 14-164 (606)
306 1p9a_G Platelet glycoprotein I 99.5 2.9E-14 9.9E-19 143.9 11.6 127 82-212 31-159 (290)
307 3e6j_A Variable lymphocyte rec 99.5 2.2E-14 7.5E-19 139.5 10.2 115 81-197 63-177 (229)
308 2id5_A Lingo-1, leucine rich r 99.5 2.2E-14 7.6E-19 155.3 11.4 142 70-212 12-163 (477)
309 4ecn_A Leucine-rich repeat pro 99.5 3.4E-15 1.2E-19 171.4 5.1 143 69-214 435-608 (876)
310 3j0a_A TOLL-like receptor 5; m 99.5 1.8E-14 6.1E-19 167.1 11.1 140 69-211 14-158 (844)
311 2r9u_A Variable lymphocyte rec 99.5 4.5E-14 1.5E-18 131.1 10.9 107 85-196 15-122 (174)
312 2z62_A TOLL-like receptor 4, v 99.5 3.2E-14 1.1E-18 142.4 10.5 112 82-194 52-164 (276)
313 2ft3_A Biglycan; proteoglycan, 99.5 8.5E-14 2.9E-18 143.3 13.3 143 66-212 30-183 (332)
314 3zyj_A Leucine-rich repeat-con 99.5 6.1E-14 2.1E-18 150.3 12.7 142 71-213 45-197 (440)
315 4b8c_D Glucose-repressible alc 99.5 1.3E-14 4.3E-19 164.9 7.2 174 32-213 129-328 (727)
316 1ziw_A TOLL-like receptor 3; i 99.5 6E-14 2.1E-18 158.8 12.4 143 68-212 3-156 (680)
317 2z63_A TOLL-like receptor 4, v 99.5 4E-14 1.4E-18 156.7 10.3 135 83-218 397-535 (570)
318 2z80_A TOLL-like receptor 2, v 99.5 2.6E-14 8.7E-19 148.5 8.1 144 66-213 27-186 (353)
319 3zyj_A Leucine-rich repeat-con 99.5 5.5E-14 1.9E-18 150.6 10.7 133 82-217 136-295 (440)
320 2xwt_C Thyrotropin receptor; s 99.5 5.1E-14 1.7E-18 137.8 9.4 145 66-213 7-168 (239)
321 3t6q_A CD180 antigen; protein- 99.5 3.2E-14 1.1E-18 158.8 9.0 134 82-217 425-563 (606)
322 3j0a_A TOLL-like receptor 5; m 99.5 1.7E-14 5.7E-19 167.4 6.5 133 82-218 426-564 (844)
323 3oja_B Anopheles plasmodium-re 99.5 5.4E-14 1.8E-18 156.7 10.1 129 83-212 52-182 (597)
324 3zyi_A Leucine-rich repeat-con 99.5 1.1E-13 3.7E-18 148.9 11.9 142 71-213 56-208 (452)
325 4ezg_A Putative uncharacterize 99.5 5.9E-14 2E-18 133.0 8.6 125 83-212 45-170 (197)
326 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 4E-14 1.4E-18 156.6 8.5 133 82-216 353-512 (562)
327 2ifg_A High affinity nerve gro 99.5 8E-14 2.7E-18 144.4 10.1 111 68-195 7-119 (347)
328 1wwl_A Monocyte differentiatio 99.5 2.4E-14 8.1E-19 146.1 5.6 131 82-214 95-241 (312)
329 3cvr_A Invasion plasmid antige 99.5 5.1E-14 1.7E-18 154.5 8.3 122 70-212 49-171 (571)
330 4glp_A Monocyte differentiatio 99.5 5.8E-14 2E-18 143.1 8.2 129 82-212 145-283 (310)
331 3zyi_A Leucine-rich repeat-con 99.5 9.6E-14 3.3E-18 149.3 10.0 136 82-217 147-306 (452)
332 2z7x_B TOLL-like receptor 1, v 99.5 4.1E-14 1.4E-18 154.9 7.3 109 81-192 323-434 (520)
333 4ezg_A Putative uncharacterize 99.5 5.9E-14 2E-18 133.1 7.3 126 82-212 66-192 (197)
334 1xku_A Decorin; proteoglycan, 99.5 1.9E-13 6.4E-18 140.5 11.6 144 65-212 27-182 (330)
335 3oja_B Anopheles plasmodium-re 99.4 2.2E-13 7.6E-18 151.7 11.5 128 82-212 75-203 (597)
336 4glp_A Monocyte differentiatio 99.4 4.6E-14 1.6E-18 143.8 5.4 130 82-213 117-263 (310)
337 3o53_A Protein LRIM1, AGAP0063 99.4 1.3E-13 4.5E-18 140.9 8.8 131 82-216 120-252 (317)
338 1wwl_A Monocyte differentiatio 99.4 6.1E-14 2.1E-18 143.1 6.0 128 83-211 150-284 (312)
339 2id5_A Lingo-1, leucine rich r 99.4 1.7E-13 5.8E-18 148.3 9.6 133 84-217 202-336 (477)
340 3g39_A Variable lymphocyte rec 99.4 3E-13 1E-17 125.0 9.7 106 108-217 11-118 (170)
341 2je0_A Acidic leucine-rich nuc 99.4 1.6E-13 5.4E-18 123.7 7.3 105 81-188 41-149 (149)
342 2ell_A Acidic leucine-rich nuc 99.4 2.6E-13 8.8E-18 125.0 8.8 109 82-194 49-162 (168)
343 2z80_A TOLL-like receptor 2, v 99.4 3E-13 1E-17 140.4 9.1 130 81-212 75-209 (353)
344 1ziw_A TOLL-like receptor 3; i 99.4 3.3E-13 1.1E-17 152.8 10.1 136 82-218 480-626 (680)
345 2r9u_A Variable lymphocyte rec 99.4 5.2E-13 1.8E-17 123.8 9.6 106 108-217 14-121 (174)
346 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 3.8E-13 1.3E-17 148.7 10.2 128 82-213 52-181 (562)
347 3oja_A Leucine-rich immune mol 99.4 1.7E-13 5.8E-18 148.6 6.5 31 344-374 322-352 (487)
348 2z7x_B TOLL-like receptor 1, v 99.4 1.6E-13 5.6E-18 150.1 6.1 127 82-213 21-150 (520)
349 2z81_A CD282 antigen, TOLL-lik 99.4 3.1E-13 1.1E-17 148.8 8.2 118 81-199 49-168 (549)
350 3o6n_A APL1; leucine-rich repe 99.4 4.7E-13 1.6E-17 140.9 8.9 129 82-212 45-176 (390)
351 3o6n_A APL1; leucine-rich repe 99.4 1.1E-12 3.6E-17 138.2 11.5 128 82-212 69-197 (390)
352 2z63_A TOLL-like receptor 4, v 99.4 5.4E-13 1.8E-17 147.6 9.6 117 81-198 420-537 (570)
353 1a9n_A U2A', U2A'; complex (nu 99.4 4E-13 1.4E-17 124.8 6.5 104 83-193 20-127 (176)
354 2xwt_C Thyrotropin receptor; s 99.4 4.8E-13 1.6E-17 130.8 7.2 128 81-212 54-190 (239)
355 1xku_A Decorin; proteoglycan, 99.4 1.6E-12 5.4E-17 133.6 11.4 127 82-213 145-275 (330)
356 1a9n_A U2A', U2A'; complex (nu 99.4 4.9E-13 1.7E-17 124.2 6.0 107 82-193 42-154 (176)
357 2ft3_A Biglycan; proteoglycan, 99.3 2.8E-12 9.7E-17 131.8 11.3 127 81-213 77-205 (332)
358 3tm0_A Aminoglycoside 3'-phosp 99.3 3E-12 1E-16 127.0 10.1 146 301-456 9-212 (263)
359 1ds9_A Outer arm dynein; leuci 99.3 1.1E-14 3.6E-19 138.4 -8.3 124 83-212 19-151 (198)
360 1xeu_A Internalin C; cellular 99.3 2.4E-12 8.2E-17 127.8 8.2 123 82-215 63-186 (263)
361 3cvr_A Invasion plasmid antige 99.3 4E-12 1.4E-16 139.5 10.7 94 83-193 81-174 (571)
362 1h6t_A Internalin B; cell adhe 99.3 3.7E-12 1.3E-16 128.4 9.5 121 82-212 68-189 (291)
363 2ifg_A High affinity nerve gro 99.3 3.8E-12 1.3E-16 131.7 8.2 106 109-217 11-119 (347)
364 1xeu_A Internalin C; cellular 99.3 7.7E-12 2.6E-16 124.1 10.0 122 82-214 41-163 (263)
365 1h6t_A Internalin B; cell adhe 99.3 4.5E-12 1.5E-16 127.8 8.1 124 81-214 89-213 (291)
366 3o53_A Protein LRIM1, AGAP0063 99.3 4.8E-13 1.6E-17 136.8 0.9 126 82-212 144-273 (317)
367 1h6u_A Internalin H; cell adhe 99.3 9.5E-12 3.3E-16 126.5 10.6 121 82-212 63-184 (308)
368 4ay9_X Follicle-stimulating ho 99.3 6.6E-12 2.3E-16 130.1 9.0 146 67-212 7-165 (350)
369 1h6u_A Internalin H; cell adhe 99.3 8.3E-12 2.8E-16 126.9 9.3 123 81-213 84-207 (308)
370 1m9s_A Internalin B; cell inva 99.3 8E-12 2.7E-16 138.5 9.8 106 82-196 65-170 (605)
371 1dce_A Protein (RAB geranylger 99.2 5.7E-12 1.9E-16 138.8 7.8 101 82-186 463-567 (567)
372 1m9s_A Internalin B; cell inva 99.2 8.3E-12 2.8E-16 138.3 9.1 123 81-213 86-209 (605)
373 1jl5_A Outer protein YOPM; leu 99.2 2E-11 6.9E-16 131.0 11.3 117 82-212 131-248 (454)
374 3bz5_A Internalin-J, INLJ; leu 99.2 2.8E-11 9.6E-16 130.0 12.3 99 83-193 43-141 (457)
375 1nd4_A Aminoglycoside 3'-phosp 99.2 8.2E-12 2.8E-16 123.3 7.4 131 313-457 26-214 (264)
376 4fmz_A Internalin; leucine ric 99.2 1.1E-11 3.8E-16 128.0 7.8 124 82-212 221-344 (347)
377 1ds9_A Outer arm dynein; leuci 99.2 6.3E-14 2.2E-18 132.9 -8.4 110 82-197 48-158 (198)
378 3bz5_A Internalin-J, INLJ; leu 99.2 3.3E-11 1.1E-15 129.4 10.9 105 81-197 147-251 (457)
379 3g06_A SSPH2 (leucine-rich rep 99.2 6.9E-12 2.3E-16 139.3 5.1 134 57-212 14-152 (622)
380 1jl5_A Outer protein YOPM; leu 99.2 2E-11 7E-16 130.9 8.3 59 131-197 317-377 (454)
381 1o6v_A Internalin A; bacterial 99.2 2.7E-11 9.4E-16 130.6 8.5 104 82-194 243-346 (466)
382 1o6v_A Internalin A; bacterial 99.2 5E-11 1.7E-15 128.5 9.4 125 81-214 220-344 (466)
383 3dxp_A Putative acyl-COA dehyd 99.1 2.9E-10 9.9E-15 118.1 12.3 141 310-457 42-248 (359)
384 4fmz_A Internalin; leucine ric 99.1 8.1E-11 2.8E-15 121.5 7.4 105 81-192 242-346 (347)
385 2ca6_A RAN GTPase-activating p 99.1 8.5E-12 2.9E-16 131.1 -0.2 131 82-213 159-315 (386)
386 2ast_B S-phase kinase-associat 99.1 6.5E-12 2.2E-16 129.1 -1.4 107 82-189 93-205 (336)
387 2ca6_A RAN GTPase-activating p 99.1 4.7E-12 1.6E-16 133.0 -3.3 131 82-213 122-286 (386)
388 3g06_A SSPH2 (leucine-rich rep 99.1 1.4E-10 4.7E-15 128.8 7.5 62 130-196 240-301 (622)
389 2ast_B S-phase kinase-associat 99.0 2.5E-11 8.6E-16 124.7 0.4 128 82-211 70-205 (336)
390 4ay9_X Follicle-stimulating ho 99.0 3.7E-10 1.3E-14 116.9 8.5 108 86-197 13-122 (350)
391 3goz_A Leucine-rich repeat-con 99.0 3.8E-11 1.3E-15 125.0 0.6 130 82-212 22-178 (362)
392 3goz_A Leucine-rich repeat-con 99.0 6.2E-11 2.1E-15 123.4 1.5 130 83-212 52-207 (362)
393 3sg8_A APH(2'')-ID; antibiotic 98.9 3.9E-10 1.3E-14 114.2 2.4 188 311-512 25-287 (304)
394 3rw6_A Nuclear RNA export fact 98.9 1.2E-10 4.1E-15 114.6 -1.4 126 68-197 77-238 (267)
395 1z7x_W Ribonuclease inhibitor; 98.8 9.4E-11 3.2E-15 125.9 -6.3 112 82-194 227-356 (461)
396 1z7x_W Ribonuclease inhibitor; 98.7 4E-10 1.4E-14 121.0 -3.2 133 81-213 255-410 (461)
397 3rw6_A Nuclear RNA export fact 98.7 2.9E-09 1E-13 104.7 1.5 80 103-185 167-257 (267)
398 3r70_A Aminoglycoside phosphot 98.7 8.5E-08 2.9E-12 97.7 12.3 137 307-458 38-238 (320)
399 3un9_A NLR family member X1; l 98.6 3.9E-09 1.3E-13 109.9 -0.5 131 82-212 101-250 (372)
400 3tdw_A Gentamicin resistance p 98.5 8.1E-07 2.8E-11 89.8 12.1 136 311-457 24-224 (306)
401 3d1u_A Putative fructosamine-3 98.5 6.7E-07 2.3E-11 89.4 11.3 75 311-389 20-98 (288)
402 3ogk_B Coronatine-insensitive 98.4 1.5E-08 5E-13 112.4 -1.9 130 82-212 378-524 (592)
403 4gkh_A Aminoglycoside 3'-phosp 98.4 7E-07 2.4E-11 88.4 10.0 135 313-457 31-223 (272)
404 3ovc_A Hygromycin-B 4-O-kinase 98.4 1.4E-06 4.8E-11 90.2 12.5 77 308-389 43-122 (362)
405 3un9_A NLR family member X1; l 98.4 5.9E-09 2E-13 108.5 -6.2 131 82-212 72-222 (372)
406 1io0_A Tropomodulin; LRR prote 98.3 5.8E-08 2E-12 90.5 -0.3 110 82-192 36-164 (185)
407 3ats_A Putative uncharacterize 98.3 1.3E-06 4.6E-11 90.1 8.2 80 312-391 26-123 (357)
408 3sb4_A Hypothetical leucine ri 98.3 1.3E-06 4.4E-11 89.2 7.9 99 83-185 227-327 (329)
409 3sb4_A Hypothetical leucine ri 98.1 7.4E-06 2.5E-10 83.5 9.6 80 130-212 225-308 (329)
410 3ogk_B Coronatine-insensitive 98.1 1.6E-06 5.4E-11 96.0 4.9 105 82-188 164-279 (592)
411 2p1m_B Transport inhibitor res 98.1 2.7E-07 9.4E-12 102.1 -2.4 129 82-212 372-517 (594)
412 2q83_A YTAA protein; 2635576, 98.0 1.9E-05 6.5E-10 80.6 11.0 141 312-456 38-251 (346)
413 3jr1_A Putative fructosamine-3 97.9 6.1E-05 2.1E-09 75.9 12.8 139 311-453 41-232 (312)
414 2olc_A MTR kinase, methylthior 97.9 2.1E-05 7.3E-10 82.3 9.1 74 311-386 35-120 (397)
415 2ra8_A Uncharacterized protein 97.9 1E-06 3.5E-11 91.0 -2.0 127 82-212 172-318 (362)
416 2p1m_B Transport inhibitor res 97.8 2.1E-06 7.3E-11 94.9 0.0 105 82-189 105-221 (594)
417 1io0_A Tropomodulin; LRR prote 97.8 4.1E-06 1.4E-10 77.8 0.5 98 96-194 26-138 (185)
418 1zyl_A Hypothetical protein YI 97.7 0.00047 1.6E-08 69.8 15.0 160 295-457 10-223 (328)
419 2ppq_A HSK, HK, homoserine kin 97.7 0.00017 5.7E-09 73.0 11.1 160 295-456 6-216 (322)
420 3f7w_A Putative fructosamine-3 97.7 0.00021 7.3E-09 71.1 11.7 75 310-388 19-97 (288)
421 3dxq_A Choline/ethanolamine ki 97.7 0.0001 3.4E-09 74.0 9.1 71 311-388 23-95 (301)
422 2pyw_A Uncharacterized protein 97.5 0.00019 6.6E-09 75.6 8.7 79 427-509 232-313 (420)
423 3feg_A Choline/ethanolamine ki 97.5 0.00024 8.3E-09 73.5 8.8 143 311-457 55-254 (379)
424 2ra8_A Uncharacterized protein 97.4 7.7E-05 2.6E-09 76.8 3.9 127 82-212 139-290 (362)
425 1nw1_A Choline kinase (49.2 KD 97.4 0.0004 1.4E-08 73.4 9.2 74 311-389 78-160 (429)
426 3c5i_A Choline kinase; choline 97.2 0.00033 1.1E-08 72.4 6.2 73 312-388 39-121 (369)
427 2qg7_A Ethanolamine kinase PV0 97.2 0.0012 4.1E-08 70.1 10.6 75 311-389 113-189 (458)
428 3rfe_A Platelet glycoprotein I 97.2 0.00058 2E-08 59.1 6.3 55 87-144 13-68 (130)
429 3csv_A Aminoglycoside phosphot 97.1 0.0013 4.5E-08 66.7 9.6 143 312-458 24-218 (333)
430 4fdw_A Leucine rich hypothetic 97.1 0.00092 3.1E-08 69.9 8.5 123 83-212 227-356 (401)
431 3rfe_A Platelet glycoprotein I 97.1 0.00074 2.5E-08 58.4 6.0 56 109-168 11-68 (130)
432 4fdw_A Leucine rich hypothetic 97.0 0.0013 4.6E-08 68.6 8.7 108 82-194 248-360 (401)
433 3i1a_A Spectinomycin phosphotr 97.0 0.0021 7E-08 65.6 9.9 31 427-457 206-236 (339)
434 3e4g_A ATP synthase subunit S, 96.7 0.00064 2.2E-08 61.8 2.5 84 82-166 61-150 (176)
435 3e4g_A ATP synthase subunit S, 96.5 0.0005 1.7E-08 62.6 0.8 93 97-190 52-150 (176)
436 3f2s_A CK, chetk-alpha, cholin 96.4 0.0073 2.5E-07 62.6 8.9 141 312-456 58-279 (401)
437 2yle_A Protein spire homolog 1 96.4 0.015 5.1E-07 54.3 9.6 102 387-511 34-135 (229)
438 3mes_A Choline kinase; malaria 96.3 0.0059 2E-07 64.0 7.3 142 311-457 75-291 (424)
439 4gt6_A Cell surface protein; l 95.6 0.015 5.2E-07 60.3 6.7 102 83-191 266-369 (394)
440 4h09_A Hypothetical leucine ri 95.5 0.035 1.2E-06 57.1 9.1 80 102-186 259-340 (379)
441 4gt6_A Cell surface protein; l 95.4 0.04 1.4E-06 57.0 9.1 107 99-212 258-368 (394)
442 1pgv_A TMD-1, tropomodulin TMD 95.4 0.003 1E-07 58.5 0.3 83 82-165 41-136 (197)
443 4fs7_A Uncharacterized protein 94.9 0.034 1.2E-06 57.6 6.7 85 100-189 291-376 (394)
444 2ks1_B Epidermal growth factor 94.3 0.016 5.5E-07 38.9 1.5 31 229-259 8-38 (44)
445 4fs7_A Uncharacterized protein 94.0 0.063 2.2E-06 55.5 6.3 97 84-189 255-353 (394)
446 2jwa_A Receptor tyrosine-prote 93.6 0.049 1.7E-06 36.4 2.8 37 222-259 2-38 (44)
447 1pgv_A TMD-1, tropomodulin TMD 93.5 0.019 6.4E-07 53.1 1.0 88 101-189 36-136 (197)
448 3g15_A CK, chetk-alpha, cholin 92.9 0.26 8.8E-06 51.1 8.8 29 429-457 246-280 (401)
449 2l2t_A Receptor tyrosine-prote 92.7 0.054 1.8E-06 36.2 2.0 32 228-259 6-37 (44)
450 4h09_A Hypothetical leucine ri 92.3 0.31 1.1E-05 49.8 8.4 86 100-189 234-320 (379)
451 4ann_A ESSB; membrane protein, 86.7 1.4 4.8E-05 40.9 7.0 116 359-513 43-158 (215)
452 2k1k_A Ephrin type-A receptor 84.8 0.77 2.6E-05 29.7 3.0 28 228-255 7-34 (38)
453 4ano_A ESSB; membrane protein, 84.6 1.8 6.2E-05 40.3 6.7 115 359-513 48-163 (219)
454 3cxl_A N-chimerin; SH2, RHO-GA 72.9 0.42 1.4E-05 50.5 -1.8 59 311-372 147-215 (463)
455 2k9y_A Ephrin type-A receptor 67.5 4 0.00014 26.7 2.8 17 230-246 11-27 (41)
456 1cja_A Protein (actin-fragmin 49.9 56 0.0019 32.3 8.7 135 312-457 75-237 (342)
457 3ls8_A Phosphatidylinositol 3- 37.1 1.6E+02 0.0054 31.7 10.4 85 364-456 402-501 (614)
458 2l8s_A Integrin alpha-1; trans 34.8 37 0.0013 23.6 3.3 21 230-250 8-28 (54)
459 2klu_A T-cell surface glycopro 33.0 18 0.0006 26.1 1.5 17 238-254 13-29 (70)
460 2knc_A Integrin alpha-IIB; tra 26.7 60 0.0021 22.6 3.3 21 230-250 11-31 (54)
461 2lz0_A Uncharacterized protein 22.9 97 0.0033 24.4 4.5 40 122-163 11-51 (100)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=6.1e-55 Score=442.65 Aligned_cols=262 Identities=22% Similarity=0.365 Sum_probs=211.4
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC------CCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP------GGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
++|.+.+.||+|+||.||+|++. +++.||||+++... ...++|.+|+++|++++|||||+++|+|.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 46778899999999999999853 47899999997643 345779999999999999999999999999999999
Q ss_pred EEeecCCCccccccCCCC---------CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEE
Q 007088 379 VYSYLENGTLYDKLHPAE---------HEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKL 449 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 449 (618)
|||||++|+|.++|+... .....++|.+++.|+.||++||+|||++ +|+||||||+|||+++++++||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEE
Confidence 999999999999996542 2235699999999999999999999999 9999999999999999999999
Q ss_pred cccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHH
Q 007088 450 SDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEW 528 (618)
Q Consensus 450 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~ 528 (618)
+|||+|+.......... .....||+.|||||++.+..|+.++|||||||++|||+| |+.||..... .+.
T Consensus 170 ~DFGla~~~~~~~~~~~--~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~--------~~~ 239 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRV--GGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--------NEV 239 (299)
T ss_dssp CCCSCHHHHTGGGCEEE--TTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--------HHH
T ss_pred CCcccceecCCCCceee--cCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--------HHH
Confidence 99999987654332211 122348999999999999999999999999999999999 9999976432 111
Q ss_pred HHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 529 ITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 529 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
......... ...+...+.++.+|+.+||+.||++|||++||++.|+++.+.-
T Consensus 240 ~~~i~~~~~----------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~ 291 (299)
T 4asz_A 240 IECITQGRV----------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS 291 (299)
T ss_dssp HHHHHHTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred HHHHHcCCC----------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 111111111 0111223456778888999999999999999999999987653
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.3e-54 Score=443.28 Aligned_cols=261 Identities=23% Similarity=0.376 Sum_probs=205.8
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC------CCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP------GGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
++|...++||+|+||.||+|++. +++.||||+++... ...++|.+|+++|++++|||||+++++|.+.+..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45677889999999999999864 47899999997643 445779999999999999999999999999999999
Q ss_pred EEeecCCCccccccCCCCC-----------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCce
Q 007088 379 VYSYLENGTLYDKLHPAEH-----------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEP 447 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 447 (618)
||||+++|+|.++++.... ...+++|.+++.|+.||++||+|||++ +|+||||||+|||+++++++
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcE
Confidence 9999999999999876432 124699999999999999999999999 99999999999999999999
Q ss_pred EEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHH
Q 007088 448 KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLV 526 (618)
Q Consensus 448 kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~ 526 (618)
||+|||+|+......... ......||+.|||||++.+..++.++|||||||++|||+| |+.||..... .
T Consensus 198 Ki~DFGla~~~~~~~~~~--~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~--------~ 267 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYR--VGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN--------T 267 (329)
T ss_dssp EECCCC------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH--------H
T ss_pred EEcccccceeccCCCcce--ecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH--------H
Confidence 999999998765432221 1123458999999999999999999999999999999999 9999975432 1
Q ss_pred HHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 527 EWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 527 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
+........... ..+.....++.+|+.+||+.||++|||++||++.|+.+.+.
T Consensus 268 ~~~~~i~~g~~~----------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 268 EAIDCITQGREL----------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HHHHHHHHTCCC----------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHcCCCC----------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 111111111110 11122345677888899999999999999999999999774
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.5e-54 Score=440.05 Aligned_cols=257 Identities=21% Similarity=0.300 Sum_probs=208.3
Q ss_pred cCCCCcEEeecCCeeEEEEEeC------CCcEEEEEEeccC--ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 307 SFSKNNIIGTGRTGATYIAMLP------GGCFIMIKRLEDS--QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
+++..++||+|+||.||+|.+. +++.||||+++.. ....++|.+|+.++++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3556789999999999999862 4689999999753 3456789999999999999999999999999999999
Q ss_pred EEeecCCCccccccCCCCC------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCc
Q 007088 379 VYSYLENGTLYDKLHPAEH------------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 446 (618)
|||||++|+|.++|..... ....++|.++++|+.|||+||+|||++ +|+||||||+|||++++++
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence 9999999999999965321 124699999999999999999999999 9999999999999999999
Q ss_pred eEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCH
Q 007088 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSL 525 (618)
Q Consensus 447 ~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l 525 (618)
+||+|||+|+........ .......||+.|||||++.++.|+.++|||||||++|||+| |+.||.....
T Consensus 184 ~Ki~DFGlar~~~~~~~~--~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~-------- 253 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYY--KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-------- 253 (308)
T ss_dssp EEECCSCCBCGGGGGGCB--CSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH--------
T ss_pred EEECCcccceeccCCCce--eEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH--------
Confidence 999999999876433221 11233458999999999999999999999999999999998 8999975432
Q ss_pred HHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 526 VEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 526 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
.+.......... ...+...+..+.+|+.+||+.||++|||++||++.|+.+
T Consensus 254 ~~~~~~i~~~~~----------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 254 QDVVEMIRNRQV----------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHHHHHHTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHHHcCCC----------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 112222211111 111233445678888899999999999999999999865
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-53 Score=432.41 Aligned_cols=261 Identities=26% Similarity=0.415 Sum_probs=202.8
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
++|...++||+|+||+||+|++.+ .||||+++... ...++|.+|++++++++|||||++++++.+ +..++||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 567788999999999999998754 58999987533 334679999999999999999999998854 568999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
|++|+|.++++... ..++|.++..|+.||++||+|||++ +|+||||||+|||+++++++||+|||+|+......
T Consensus 113 ~~gGsL~~~l~~~~---~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 186 (307)
T 3omv_A 113 CEGSSLYKHLHVQE---TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp CSSCBHHHHHHTSC---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-----
T ss_pred CCCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCC
Confidence 99999999997554 3599999999999999999999999 99999999999999999999999999998765422
Q ss_pred CcccccccCCCCcccccCCCCCC---CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPR---TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
.. .......||+.|||||++. ...|+.++|||||||++|||+||+.||...... ...........
T Consensus 187 ~~--~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~--------~~~~~~~~~~~-- 254 (307)
T 3omv_A 187 GS--QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR--------DQIIFMVGRGY-- 254 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH--------HHHHHHHHTTC--
T ss_pred cc--eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH--------HHHHHHHhcCC--
Confidence 21 1122345999999999875 346899999999999999999999999754321 11111111110
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
..+.+ .......+..+.+++.+||+.||++|||+.||++.|+.+...+
T Consensus 255 --~~p~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 255 --ASPDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp --CCCCS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred --CCCCc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 01111 1112233456778888999999999999999999999887654
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.4e-53 Score=430.36 Aligned_cols=274 Identities=21% Similarity=0.287 Sum_probs=207.8
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCC----eeEEEEe
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK----ERLLVYS 381 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lV~e 381 (618)
++|...++||+|+||.||+|++ +|+.||||+++........+..|+..+.+++|||||++++++.+++ ..|+|||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 4677789999999999999998 6899999999765433333455666677899999999999998764 5799999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC-----CCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC-----NPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
|+++|+|.++++.. .++|..+.+++.|+++||+|||+++ .++|+||||||+|||++.++++||+|||+|+
T Consensus 82 y~~~gsL~~~l~~~-----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~ 156 (303)
T 3hmm_A 82 YHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp CCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred CCCCCcHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCc
Confidence 99999999999653 4899999999999999999999762 4589999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCCC------CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccc-------c
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL------VATPKGDVYSFGVVLLELITGERPTHLTNAPESFK-------G 523 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~-------~ 523 (618)
.................||+.|||||++.+. .++.++|||||||++|||+||++||......+... .
T Consensus 157 ~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3hmm_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp EEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred cccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccc
Confidence 7755433322223345699999999998654 46789999999999999999998876443221111 1
Q ss_pred CHHHHHHHHhcCCccchhccccccCC-CCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 524 SLVEWITLLNTNSSLETAIDKSLLGN-GFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 524 ~l~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
............ . .++.+... ...+....+.+|+.+||+.||++||||.||++.|+++.++-
T Consensus 237 ~~~~~~~~~~~~-~----~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 237 SVEEMRKVVCEQ-K----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CHHHHHHHHTTS-C----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred hHHHHHHHHhcc-c----CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 122222211111 1 11111111 12346678889999999999999999999999999998753
No 6
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.8e-53 Score=438.11 Aligned_cols=249 Identities=21% Similarity=0.306 Sum_probs=199.3
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
++|++.+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 6899999999999999999995 579999999997543 234678999999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
||+||+|.+++...+. ..+++.+++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~~~--~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKG--VLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp CCTTCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred CCCCCcHHHHHHHcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 9999999999965443 4589999999999999999999999 9999999999999999999999999999876532
Q ss_pred CCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchh
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETA 541 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 541 (618)
... ....+||+.|||||++.+..|+.++|||||||++|||+||+.||...+. .+..........
T Consensus 179 ~~~----~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--------~~~~~~i~~~~~---- 242 (350)
T 4b9d_A 179 VEL----ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM--------KNLVLKIISGSF---- 242 (350)
T ss_dssp HHH----HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHTCC----
T ss_pred ccc----ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--------HHHHHHHHcCCC----
Confidence 211 1223499999999999999999999999999999999999999975432 122222211110
Q ss_pred ccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 542 IDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 542 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+.+ ......++.+|+.+||+.||++|||++|+++
T Consensus 243 --~~~----~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 243 --PPV----SLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp --CCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --CCC----CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 001 1112345667777999999999999999976
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.4e-52 Score=429.50 Aligned_cols=260 Identities=17% Similarity=0.176 Sum_probs=207.5
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
.+.|+..++||+|+||.||+|+. .+|+.||||+++..... .+|+.++++++|||||++++++.+++..|+||||+
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~----~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC----THHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH----HHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 35688889999999999999995 56899999999764322 46999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC-ceEEcccCcccccCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF-EPKLSDFGLARLMNPVD 462 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfG~a~~~~~~~ 462 (618)
+||+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++ ++||+|||+|+.+....
T Consensus 133 ~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 133 EGGSLGQLIKQMG----CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp TTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred CCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence 9999999997543 499999999999999999999999 999999999999999987 69999999999875433
Q ss_pred Cccc-ccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchh
Q 007088 463 THLS-TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETA 541 (618)
Q Consensus 463 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 541 (618)
.... ......+||+.|||||++.+..|+.++|||||||++|||+||+.||......+ .+..... ......
T Consensus 206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~----~~~~i~~---~~~~~~-- 276 (336)
T 4g3f_A 206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP----LCLKIAS---EPPPIR-- 276 (336)
T ss_dssp --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC----CHHHHHH---SCCGGG--
T ss_pred cccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH----HHHHHHc---CCCCch--
Confidence 2211 11223469999999999999999999999999999999999999997654332 1111111 111100
Q ss_pred ccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcC
Q 007088 542 IDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYH 591 (618)
Q Consensus 542 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (618)
.+ +......+.+++.+||+.||++|||+.|+++.|....++..
T Consensus 277 ---~~----~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 277 ---EI----PPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp ---GS----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred ---hc----CccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence 01 11223456667779999999999999999999998877654
No 8
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.1e-52 Score=429.44 Aligned_cols=248 Identities=23% Similarity=0.374 Sum_probs=204.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
+.|+..++||+|+||.||+|+. .+|+.||||++.... ...+.+.+|+++|++++|||||++++++.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 4688899999999999999995 579999999996533 34456889999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
++|+|.+++... .+++.++..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+|+.+.....
T Consensus 154 ~gg~L~~~l~~~-----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 225 (346)
T 4fih_A 154 EGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 225 (346)
T ss_dssp TTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred CCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCC
Confidence 999999998643 489999999999999999999999 999999999999999999999999999998754433
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
.. ...+||+.|||||++.+..|+.++||||+||++|||++|+.||..... .+......... .
T Consensus 226 ~~----~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--------~~~~~~i~~~~------~ 287 (346)
T 4fih_A 226 RR----KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--------LKAMKMIRDNL------P 287 (346)
T ss_dssp CB----CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHHSS------C
T ss_pred cc----cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--------HHHHHHHHcCC------C
Confidence 22 234599999999999999999999999999999999999999975332 11111111111 0
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+.+ ........++.+++.+||+.||++|||++|+++
T Consensus 288 ~~~--~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 288 PRL--KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp CCC--SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCC--CccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 001 111122345667777999999999999999865
No 9
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.2e-52 Score=425.05 Aligned_cols=248 Identities=21% Similarity=0.271 Sum_probs=205.3
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC----ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS----QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|++.+.||+|+||+||+|+. .+|+.||||++.+. ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5799999999999999999995 57899999999653 345677999999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||++||+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 112 Ey~~gG~L~~~i~~~~----~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp CCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 9999999999997543 499999999999999999999999 999999999999999999999999999998754
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
.... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||...+. .+.........
T Consensus 185 ~~~~--~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--------~~~~~~i~~~~---- 250 (311)
T 4aw0_A 185 ESKQ--ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE--------GLIFAKIIKLE---- 250 (311)
T ss_dssp TTTC--CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTC----
T ss_pred CCCc--ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCC----
Confidence 3221 122345699999999999999999999999999999999999999975432 11111111111
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..+. +..+ .++.+++.+||+.||++|||++|++.
T Consensus 251 ---~~~p-~~~s---~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 251 ---YDFP-EKFF---PKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp ---CCCC-TTCC---HHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred ---CCCC-cccC---HHHHHHHHHHccCCHhHCcChHHHcC
Confidence 0011 1122 34566777999999999999999754
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.2e-51 Score=415.68 Aligned_cols=243 Identities=23% Similarity=0.311 Sum_probs=192.8
Q ss_pred CCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEe----CCeeEEEE
Q 007088 309 SKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVA----KKERLLVY 380 (618)
Q Consensus 309 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lV~ 380 (618)
...++||+|+||.||+|.. .++..||+|++.... ...+.|.+|++++++++|||||++++++.+ ++..|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 4556899999999999995 568999999996543 334678999999999999999999999875 34579999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCC--ceecCCCCCCeeeCC-CCceEEcccCcccc
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR--IIHRNISSKCILLDG-DFEPKLSDFGLARL 457 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~-~~~~kl~DfG~a~~ 457 (618)
|||++|+|.+++.... .+++..+..|+.||+.||+|||++ + |+||||||+|||++. ++.+||+|||+|+.
T Consensus 109 Ey~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~ 181 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp ECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred eCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCCEe
Confidence 9999999999997543 599999999999999999999998 6 999999999999984 78999999999986
Q ss_pred cCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 458 MNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 458 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
..... ....+||+.|||||++.+ +|+.++|||||||++|||+||+.||..... .............
T Consensus 182 ~~~~~------~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~-------~~~~~~~i~~~~~ 247 (290)
T 3fpq_A 182 KRASF------AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-------AAQIYRRVTSGVK 247 (290)
T ss_dssp CCTTS------BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-------HHHHHHHHTTTCC
T ss_pred CCCCc------cCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-------HHHHHHHHHcCCC
Confidence 44321 123459999999998865 699999999999999999999999975332 1122222211111
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
...++ ...+ .++.+++.+||+.||++|||++|+++
T Consensus 248 -~~~~~-----~~~~---~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 248 -PASFD-----KVAI---PEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -CGGGG-----GCCC---HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -CCCCC-----ccCC---HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11111 1112 34667777999999999999999875
No 11
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.2e-51 Score=412.06 Aligned_cols=244 Identities=21% Similarity=0.337 Sum_probs=189.4
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|++.+.||+|+||.||+|+. .+|+.||+|++++.. ...+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 6899999999999999999994 579999999996532 34567999999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+ +|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+|+....
T Consensus 93 Ey~-~g~L~~~l~~~~----~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHHSC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred eCC-CCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 999 679999987543 499999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVA-TPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
... ....+||+.|+|||++.+..+ +.++||||+||++|||+||+.||...+. ............
T Consensus 165 ~~~-----~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~--------~~~~~~i~~~~~-- 229 (275)
T 3hyh_A 165 GNF-----LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI--------PVLFKNISNGVY-- 229 (275)
T ss_dssp ---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCC--
T ss_pred CCc-----cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHcCCC--
Confidence 322 123459999999999998876 5799999999999999999999975321 222222211110
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+ ....+ .++.+++.+||+.||++|||++|+++
T Consensus 230 -----~~-p~~~s---~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 230 -----TL-PKFLS---PGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -----CC-CTTSC---HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -----CC-CCCCC---HHHHHHHHHHccCChhHCcCHHHHHc
Confidence 01 01122 34566777999999999999999976
No 12
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=7e-52 Score=429.41 Aligned_cols=270 Identities=23% Similarity=0.315 Sum_probs=214.1
Q ss_pred HHHHHHhhccCCCCcEEeecCCeeEEEEEeCC------CcEEEEEEeccCc--cCHHHHHHHHHHHhcCCC-CCccceeE
Q 007088 298 LSDLMKATNSFSKNNIIGTGRTGATYIAMLPG------GCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRH-RNLVPLLG 368 (618)
Q Consensus 298 ~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h-~niv~l~~ 368 (618)
.++.+...++|++.+.||+|+||.||+|.+.+ ++.||||+++... ...++|.+|+++|.+++| ||||+++|
T Consensus 56 ~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g 135 (353)
T 4ase_A 56 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 135 (353)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred CcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence 34444556789999999999999999998532 4689999997643 335679999999999965 89999999
Q ss_pred EEEeC-CeeEEEEeecCCCccccccCCCCC------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCC
Q 007088 369 FCVAK-KERLLVYSYLENGTLYDKLHPAEH------------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNIS 435 (618)
Q Consensus 369 ~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 435 (618)
+|.+. +..++|||||++|+|.++|+.... ....+++.+++.++.|||+||+|||++ +|||||||
T Consensus 136 ~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK 212 (353)
T 4ase_A 136 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLA 212 (353)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred EEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccC
Confidence 99765 568999999999999999965322 124589999999999999999999999 99999999
Q ss_pred CCCeeeCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCC
Q 007088 436 SKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHL 514 (618)
Q Consensus 436 p~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~ 514 (618)
|+|||+++++.+||+|||+|+.......... .....||+.|||||++.+..|+.++|||||||++|||+| |+.||..
T Consensus 213 ~~NILl~~~~~vKi~DFGlar~~~~~~~~~~--~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~ 290 (353)
T 4ase_A 213 ARNILLSEKNVVKICDFGLARDIYKDPDYVR--KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290 (353)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEE--ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred ccceeeCCCCCEEECcchhhhhcccCCCcee--eccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999987654332211 123348999999999999999999999999999999998 9999976
Q ss_pred CCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 515 TNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 515 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
....+ .+...+ ..... ...+.....++.+++.+||+.||++|||++||++.|+++.+.
T Consensus 291 ~~~~~----~~~~~i---~~g~~----------~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 291 VKIDE----EFCRRL---KEGTR----------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp CCCSH----HHHHHH---HHTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCHHH----HHHHHH---HcCCC----------CCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 43221 111111 11111 111122334677788899999999999999999999998765
No 13
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.3e-50 Score=426.30 Aligned_cols=248 Identities=23% Similarity=0.371 Sum_probs=204.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
+.|+..++||+|+||.||+|+. .+|+.||||++.... ...+.+.+|+.+|++++|||||+++++|.+.+..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 5699999999999999999995 569999999996533 34556889999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
+||+|.+++... .+++.++..|+.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+.+.....
T Consensus 231 ~gG~L~~~i~~~-----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~ 302 (423)
T 4fie_A 231 EGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 302 (423)
T ss_dssp TTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC
T ss_pred CCCcHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCc
Confidence 999999998643 389999999999999999999999 999999999999999999999999999988755433
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
.. ...+||+.|||||++.+..|+.++|||||||++|||++|+.||..... .+......... .
T Consensus 303 ~~----~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--------~~~~~~i~~~~------~ 364 (423)
T 4fie_A 303 RR----KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--------LKAMKMIRDNL------P 364 (423)
T ss_dssp CB----CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHHSC------C
T ss_pred cc----cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--------HHHHHHHHcCC------C
Confidence 22 234599999999999999999999999999999999999999975332 11111111111 0
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+.+. ........+.+|+.+||+.||++|||++|+++
T Consensus 365 ~~~~--~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 365 PRLK--NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp CCCS--CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCc--ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111 11112245666777999999999999999865
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=7.8e-52 Score=418.99 Aligned_cols=241 Identities=22% Similarity=0.266 Sum_probs=190.5
Q ss_pred ccCCCCcEEeecCCeeEEEEEe----CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML----PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
++|++.+.||+|+||.||+|+. .+++.||||+++... .....+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 5799999999999999999985 247899999996532 233468899999999999999999999999999999
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
||||++||+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+|+..
T Consensus 104 vmEy~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV----MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EECCCTTCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEcCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 999999999999997543 499999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCcc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSL 538 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~ 538 (618)
...... ....+||+.|||||++.+..|+.++||||+||++|||+||+.||...+. .+..........
T Consensus 177 ~~~~~~----~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--------~~~~~~i~~~~~- 243 (304)
T 3ubd_A 177 IDHEKK----AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR--------KETMTMILKAKL- 243 (304)
T ss_dssp ----CC----CCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCC-
T ss_pred cCCCcc----ccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH--------HHHHHHHHcCCC-
Confidence 433222 2234599999999999999999999999999999999999999975432 111211111110
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCH
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTM 576 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 576 (618)
.. .... ..++.+++.+||+.||++|||+
T Consensus 244 ------~~-p~~~---s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 244 ------GM-PQFL---SPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp ------CC-CTTS---CHHHHHHHHHHTCSSGGGSTTC
T ss_pred ------CC-CCcC---CHHHHHHHHHHcccCHHHCCCC
Confidence 00 1112 2356667779999999999985
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=4.9e-49 Score=399.87 Aligned_cols=252 Identities=21% Similarity=0.319 Sum_probs=188.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCC--------
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK-------- 374 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-------- 374 (618)
++|++.+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 4689999999999999999995 578999999986533 33467899999999999999999999987654
Q ss_pred ----eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEc
Q 007088 375 ----ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLS 450 (618)
Q Consensus 375 ----~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 450 (618)
..|+||||+++|+|.+++..... ....++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCT-IEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCS-GGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCC-CChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 36899999999999999976543 23466778899999999999999999 99999999999999999999999
Q ss_pred ccCcccccCCCCCccc--------ccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccc
Q 007088 451 DFGLARLMNPVDTHLS--------TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522 (618)
Q Consensus 451 DfG~a~~~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~ 522 (618)
|||+|+.......... ....+.+||+.|||||++.+..|+.++|||||||++|||++ ||....
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~------ 231 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM------ 231 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH------
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc------
Confidence 9999988754322111 11223469999999999999999999999999999999996 775311
Q ss_pred cCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 523 GSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 523 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.......... ...... ........+.+++.+||+.||++|||+.|+++
T Consensus 232 -~~~~~~~~~~-~~~~p~---------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 232 -ERVRTLTDVR-NLKFPP---------LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp -HHHHHHHHHH-TTCCCH---------HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HHHHHHHHHh-cCCCCC---------CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0011111111 111000 01223345567888999999999999999875
No 16
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=6.9e-48 Score=398.45 Aligned_cols=291 Identities=41% Similarity=0.709 Sum_probs=251.8
Q ss_pred ccccCHHHHHHhhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEE
Q 007088 293 VEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFC 370 (618)
Q Consensus 293 ~~~~~~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~ 370 (618)
...+++.++..+.++|+..+.||+|+||.||+|...+++.||+|++.... .....+.+|++++++++||||+++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 45789999999999999999999999999999998889999999997643 2234689999999999999999999999
Q ss_pred EeCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEc
Q 007088 371 VAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLS 450 (618)
Q Consensus 371 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 450 (618)
.+.+..++||||+++|+|.+++.........+++..+..++.|++.||+|||+.+.++|+||||||+||+++.++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 99999999999999999999998776555679999999999999999999999877789999999999999999999999
Q ss_pred ccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHH
Q 007088 451 DFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWIT 530 (618)
Q Consensus 451 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~ 530 (618)
|||+++.......... ....||+.|+|||++.+..++.++||||||+++|||++|+.||...............|..
T Consensus 177 Dfg~~~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (326)
T 3uim_A 177 DFGLAKLMDYKDTHVT---TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253 (326)
T ss_dssp CCSSCEECCSSSSCEE---CCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred cCccccccCccccccc---ccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence 9999987654333221 2334899999999998888999999999999999999999999643222233446677777
Q ss_pred HHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 531 LLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 531 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
............+..+......+....+.+++.+||+.||.+|||++||++.|++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp TTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 77777777777777777777888999999999999999999999999999999874
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-47 Score=402.37 Aligned_cols=263 Identities=22% Similarity=0.302 Sum_probs=198.1
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCcc---CHHHHHHHHHHHhcCCCCCccceeEEEEeC------Ce
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQH---SEKEFLSEINTLGSVRHRNLVPLLGFCVAK------KE 375 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 375 (618)
++|++.+.||+|+||.||+|+. .+|+.||||+++.... ..+.+.+|+++|++++|||||++++++... +.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 5799999999999999999995 5799999999976432 345688999999999999999999997643 56
Q ss_pred eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcc
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLA 455 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 455 (618)
.|+||||++ |+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~----~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ----PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeCCC-CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeeccee
Confidence 899999996 68999997654 599999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhc
Q 007088 456 RLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT 534 (618)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~ 534 (618)
+.+..............+||+.|+|||++.+. .++.++||||+||++|||++|++||...+..+ .+.........
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~----~l~~I~~~~g~ 281 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH----QLQLIMMVLGT 281 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH----HHHHHHHHHCC
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH----HHHHHHHhcCC
Confidence 87654332222333456799999999998765 56999999999999999999999997643211 11111110000
Q ss_pred CC-c---------cchhccccccCC--C-----CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 535 NS-S---------LETAIDKSLLGN--G-----FDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 535 ~~-~---------~~~~~d~~l~~~--~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.. . ....+. .+... . ......++.+|+.+||..||++|||++|+++
T Consensus 282 p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 282 PSPAVIQAVGAERVRAYIQ-SLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp CCGGGTC-----CHHHHHH-SSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CChHHhhhhhhhhhhhhhh-cCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00 0 000000 00000 0 0011245667788999999999999999865
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=9e-47 Score=393.55 Aligned_cols=204 Identities=23% Similarity=0.318 Sum_probs=173.4
Q ss_pred HHhhccCCCCcEEeecCCeeEEEEEe----CCCcEEEEEEeccCccCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCee
Q 007088 302 MKATNSFSKNNIIGTGRTGATYIAML----PGGCFIMIKRLEDSQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKER 376 (618)
Q Consensus 302 ~~~~~~y~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 376 (618)
....++|++.++||+|+||+||+|+. ..++.||+|++.... ...++.+|+++++++ +||||+++++++.+.++.
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 34567899999999999999999984 247899999986643 456788999999998 699999999999999999
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC-CceEEcccCcc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD-FEPKLSDFGLA 455 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfG~a 455 (618)
|+||||+++|+|.+++. .+++.++..++.||+.||+|||++ ||+||||||+|||++.+ +.+||+|||+|
T Consensus 96 ~lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla 165 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLA 165 (361)
T ss_dssp EEEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCC
Confidence 99999999999999983 389999999999999999999999 99999999999999876 79999999999
Q ss_pred cccCCCCCcc------------------------cccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCC
Q 007088 456 RLMNPVDTHL------------------------STFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGER 510 (618)
Q Consensus 456 ~~~~~~~~~~------------------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~ 510 (618)
+......... .......+||+.|+|||++.+. .|+.++||||+||++|||++|+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~ 245 (361)
T 4f9c_A 166 QGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY 245 (361)
T ss_dssp EECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred cccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC
Confidence 8654432111 0112234699999999998775 58999999999999999999999
Q ss_pred CCCCCC
Q 007088 511 PTHLTN 516 (618)
Q Consensus 511 Pf~~~~ 516 (618)
||....
T Consensus 246 Pf~~~~ 251 (361)
T 4f9c_A 246 PFYKAS 251 (361)
T ss_dssp SSSCCS
T ss_pred CCCCCC
Confidence 997543
No 19
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.7e-46 Score=387.23 Aligned_cols=288 Identities=36% Similarity=0.580 Sum_probs=243.6
Q ss_pred ccCHHHHHHhhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 007088 295 KMRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373 (618)
Q Consensus 295 ~~~~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 373 (618)
.+++.++..++++|+..+.||+|+||.||+|...+++.||+|++.... ...+.+.+|++++++++||||+++++++.+.
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 455566677889999999999999999999998889999999987643 3456789999999999999999999999999
Q ss_pred CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccC
Q 007088 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFG 453 (618)
Q Consensus 374 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 453 (618)
+..++||||+++|+|.+++.........+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCT
T ss_pred CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecc
Confidence 999999999999999999987655445699999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHh
Q 007088 454 LARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLN 533 (618)
Q Consensus 454 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~ 533 (618)
+++......... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+ ......|.....
T Consensus 185 ~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~--~~~~~~~~~~~~ 260 (321)
T 2qkw_B 185 ISKKGTELDQTH--LSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE--MVNLAEWAVESH 260 (321)
T ss_dssp TCEECSSSSCCC--CBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSS--CCCHHHHTHHHH
T ss_pred cccccccccccc--cccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHH--HHHHHHHhhhcc
Confidence 998654322111 1122347999999999988899999999999999999999999998655432 234556665555
Q ss_pred cCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 534 TNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 534 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
........+++.+......+....+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp TTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred ccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 56666667777766666778889999999999999999999999999999998653
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=8.5e-46 Score=409.06 Aligned_cols=251 Identities=22% Similarity=0.319 Sum_probs=204.4
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
.++|++.+.||+|+||.||+|.. .+|+.||+|++.... ...+.+.+|+++|++++|||||++++++.+.+..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 46899999999999999999995 579999999986643 3456788999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC--CceEEcccCcccccCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD--FEPKLSDFGLARLMNP 460 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~DfG~a~~~~~ 460 (618)
|+||+|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+..
T Consensus 236 ~~gg~L~~~i~~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 236 MSGGELFEKVADEH---NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp CCCCBHHHHHTCTT---SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred cCCCcHHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 99999999986543 3589999999999999999999999 99999999999999854 8999999999998765
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
.... ...+||+.|+|||++.+..|+.++||||+||++|||++|+.||..... .+...........
T Consensus 310 ~~~~-----~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~--------~~~~~~i~~~~~~-- 374 (573)
T 3uto_A 310 KQSV-----KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND--------DETLRNVKSCDWN-- 374 (573)
T ss_dssp TSEE-----EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHHHHTTCCC--
T ss_pred CCce-----eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--------HHHHHHHHhCCCC--
Confidence 3322 223599999999999999999999999999999999999999975432 1111111111100
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+.... .......+.+|+.+||+.||.+|||++|+++
T Consensus 375 -~~~~~----~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 375 -MDDSA----FSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp -CCSGG----GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -CCccc----ccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00000 1112234566777999999999999999976
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.3e-45 Score=403.28 Aligned_cols=248 Identities=21% Similarity=0.250 Sum_probs=196.9
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHH---HHHHHHhcCCCCCccceeEEEEeCCee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFL---SEINTLGSVRHRNLVPLLGFCVAKKER 376 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~---~E~~~l~~l~h~niv~l~~~~~~~~~~ 376 (618)
.++|++.+.||+|+||.||+|+. .+|+.||||++.+.. .....+. .++.+++.++|||||+++++|.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 46799999999999999999995 569999999996432 2233333 446777888999999999999999999
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
|+||||++||+|.+++.... .+++..+..++.||+.||+|||++ +||||||||+|||++.+|++||+|||+|+
T Consensus 268 ylVmEy~~GGdL~~~l~~~~----~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceee
Confidence 99999999999999997543 499999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCC-CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcC
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPR-TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN 535 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~ 535 (618)
....... ...+||+.|||||++. +..|+.++||||+||++|||++|+.||...... ...+........
T Consensus 341 ~~~~~~~------~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~-----~~~~i~~~i~~~ 409 (689)
T 3v5w_A 341 DFSKKKP------HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK-----DKHEIDRMTLTM 409 (689)
T ss_dssp ECSSCCC------CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC-----CHHHHHHHHHHC
T ss_pred ecCCCCC------CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHhhcCC
Confidence 7654322 2346999999999986 457999999999999999999999999754322 111111111111
Q ss_pred CccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 007088 536 SSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHT-----MFEVYQ 581 (618)
Q Consensus 536 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 581 (618)
. ..+ ....+ .++.+|+.+||+.||.+|++ ++||++
T Consensus 410 ~-------~~~-p~~~S---~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 410 A-------VEL-PDSFS---PELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp C-------CCC-CTTSC---HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred C-------CCC-CccCC---HHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 0 001 11123 34566677999999999998 677643
No 22
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=3.3e-43 Score=360.05 Aligned_cols=283 Identities=34% Similarity=0.573 Sum_probs=229.8
Q ss_pred ccccCHHHHHHhhccCCCC------cEEeecCCeeEEEEEeCCCcEEEEEEeccC-----ccCHHHHHHHHHHHhcCCCC
Q 007088 293 VEKMRLSDLMKATNSFSKN------NIIGTGRTGATYIAMLPGGCFIMIKRLEDS-----QHSEKEFLSEINTLGSVRHR 361 (618)
Q Consensus 293 ~~~~~~~~l~~~~~~y~~~------~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~h~ 361 (618)
...|++.++..++++|... +.||+|+||.||+|.. +++.||+|++... ....+.+.+|+.++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 4578999999999999887 9999999999999987 6789999998643 23356789999999999999
Q ss_pred CccceeEEEEeCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee
Q 007088 362 NLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL 441 (618)
Q Consensus 362 niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 441 (618)
||+++++++.+.+..++||||+++|+|.+++..... ..++++..++.++.|++.||+|||+. +|+||||||+||++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili 166 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG-TPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILL 166 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG-CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEE
Confidence 999999999999999999999999999999865432 24699999999999999999999999 99999999999999
Q ss_pred CCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcc
Q 007088 442 DGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESF 521 (618)
Q Consensus 442 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~ 521 (618)
+.++.+||+|||+++......... ......||+.|+|||.+.+ .++.++||||||+++|+|++|+.||........
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~- 242 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTV--MTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL- 242 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCE--ECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB-
T ss_pred cCCCcEEEeecccccccccccccc--cccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH-
Confidence 999999999999998765432211 1123458999999998865 579999999999999999999999986544321
Q ss_pred ccCHHHHHHHHhc-CCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhh
Q 007088 522 KGSLVEWITLLNT-NSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAE 588 (618)
Q Consensus 522 ~~~l~~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 588 (618)
+..+...... ...+...+++.+ ..........+.+++.+||+.||.+|||+.|+++.|+++..
T Consensus 243 ---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 243 ---LLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp ---TTHHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred ---HHHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 2222222222 222333444433 23456677889999999999999999999999999999854
No 23
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.7e-44 Score=362.47 Aligned_cols=257 Identities=23% Similarity=0.361 Sum_probs=214.1
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
++|+..+.||+|+||.||+|...++..||+|++.......+++.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 89 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH 89 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCC
Confidence 56888999999999999999988899999999988777788899999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 90 ~~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 161 (269)
T 4hcu_A 90 GCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-- 161 (269)
T ss_dssp CBHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH--
T ss_pred CcHHHHHHhcC---cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccccc--
Confidence 99999996544 3589999999999999999999999 999999999999999999999999999987654221
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDK 544 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 544 (618)
.......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||..... .+..........
T Consensus 162 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~--------~~~~~~~~~~~~------- 225 (269)
T 4hcu_A 162 -TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--------SEVVEDISTGFR------- 225 (269)
T ss_dssp -HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTTCC-------
T ss_pred -ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH--------HHHHHHHhcCcc-------
Confidence 11223346788999999988899999999999999999999 9999975322 111111111100
Q ss_pred cccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 545 SLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 545 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
..........+.+++.+||+.||++|||++|+++.|+++.++
T Consensus 226 ---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 226 ---LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ---CCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 001111234577778899999999999999999999999764
No 24
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.4e-43 Score=361.79 Aligned_cols=262 Identities=23% Similarity=0.365 Sum_probs=211.6
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC-ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS-QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
++|...+.||+|+||.||+|.. .+++.||+|++... ....+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 5688899999999999999996 46899999988653 345677999999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 90 ~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 163 (310)
T 3s95_A 90 KGGTLRGIIKSMD---SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163 (310)
T ss_dssp TTCBHHHHHHHCC---TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC----
T ss_pred CCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccccc
Confidence 9999999997643 3589999999999999999999999 999999999999999999999999999987654322
Q ss_pred ccc----------ccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcccc-CHHHHHHHH
Q 007088 464 HLS----------TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKG-SLVEWITLL 532 (618)
Q Consensus 464 ~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~-~l~~~~~~~ 532 (618)
... .......||+.|+|||++.+..++.++||||||+++|||++|..|+........... .........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T 3s95_A 164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY 243 (310)
T ss_dssp ----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHT
T ss_pred cccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccccc
Confidence 111 001134589999999999999999999999999999999999999876443222111 122211111
Q ss_pred hcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 533 NTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 533 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
. .......+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 244 -------------~----~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 244 -------------C----PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp -------------C----CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -------------C----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 0 0112235677888999999999999999999999998764
No 25
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.4e-43 Score=363.53 Aligned_cols=262 Identities=28% Similarity=0.397 Sum_probs=203.5
Q ss_pred HhhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCcc---CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 303 KATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQH---SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 303 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
...++|++.+.||+|+||.||+|.. +++.||+|++..... ..+++.+|++++++++||||+++++++.+.+..++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 3456899999999999999999987 688899999976442 335688999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCC--ceecCCCCCCeeeCCCCceEEcccCcccc
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR--IIHRNISSKCILLDGDFEPKLSDFGLARL 457 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 457 (618)
|||+++|+|.+++..... ...+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++.
T Consensus 113 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 188 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188 (309)
T ss_dssp EECCTTCBHHHHHHSTTH-HHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred EecCCCCcHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence 999999999999976432 13489999999999999999999999 8 99999999999999999999999999986
Q ss_pred cCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 458 MNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 458 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
....... .....||+.|+|||++.+..++.++||||||+++|||++|+.||..... .+..........
T Consensus 189 ~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~--------~~~~~~~~~~~~ 256 (309)
T 3p86_A 189 KASTFLS----SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP--------AQVVAAVGFKCK 256 (309)
T ss_dssp -----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH--------HHHHHHHHHSCC
T ss_pred ccccccc----cccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhcCC
Confidence 5432211 1223489999999999999999999999999999999999999975332 111111110100
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
. ..........+.+++.+||+.||++|||++|+++.|+.+.+..
T Consensus 257 ~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 257 R---------LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp C---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred C---------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 0 0111122345777888999999999999999999999998764
No 26
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.4e-43 Score=361.51 Aligned_cols=264 Identities=25% Similarity=0.362 Sum_probs=204.0
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhc--CCCCCccceeEEEEeC----CeeEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGS--VRHRNLVPLLGFCVAK----KERLL 378 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~----~~~~l 378 (618)
.++|++.+.||+|+||.||+|+. +++.||||++... ..+.+..|.+++.. ++||||+++++++... ...++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR--DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc--cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 46899999999999999999988 6899999999764 34455666666655 7999999999997653 45789
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCceecCCCCCCeeeCCCCceEEc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH--------HNCNPRIIHRNISSKCILLDGDFEPKLS 450 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 450 (618)
||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||+|||++.++.+||+
T Consensus 84 v~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~ 155 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIA 155 (301)
T ss_dssp EECCCTTCBHHHHHTTC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEEC
T ss_pred ehhhccCCCHHHHHhhc-----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEe
Confidence 99999999999999543 4899999999999999999999 77 99999999999999999999999
Q ss_pred ccCcccccCCCCCcccccccCCCCcccccCCCCCCCC------CCCCccchHHHHHHHHHHHhC----------CCCCCC
Q 007088 451 DFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL------VATPKGDVYSFGVVLLELITG----------ERPTHL 514 (618)
Q Consensus 451 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDVwS~Gvil~elltG----------~~Pf~~ 514 (618)
|||+++.................||+.|+|||++.+. .++.++|||||||++|||++| +.||..
T Consensus 156 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~ 235 (301)
T 3q4u_A 156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD 235 (301)
T ss_dssp CCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccc
Confidence 9999987654433322222334689999999998776 455799999999999999999 788765
Q ss_pred CCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 515 TNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 515 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
...... ................. +... .........+.+++.+||+.||++|||+.|+++.|+++
T Consensus 236 ~~~~~~---~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 236 VVPNDP---SFEDMRKVVCVDQQRPN-IPNR---WFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TSCSSC---CHHHHHHHHTTSCCCCC-CCGG---GGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCCCc---chhhhhHHHhccCCCCC-CChh---hccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 433221 12222221111111110 0000 01234667888999999999999999999999999986
No 27
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4e-44 Score=359.45 Aligned_cols=258 Identities=22% Similarity=0.387 Sum_probs=213.7
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecC
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLE 384 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 384 (618)
.++|++.+.||+|+||.||+|...++..||+|+++......+++.+|++++.+++||||+++++++.+.+..++||||++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS 86 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence 46788899999999999999999889899999998877778889999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCc
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 464 (618)
+++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.........
T Consensus 87 ~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 160 (268)
T 3sxs_A 87 NGCLLNYLRSHG---KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV 160 (268)
T ss_dssp TCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEE
T ss_pred CCcHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhh
Confidence 999999986543 3589999999999999999999999 9999999999999999999999999999876543321
Q ss_pred ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 465 LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
. .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..... .............
T Consensus 161 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~~~~----- 224 (268)
T 3sxs_A 161 S---SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN--------SEVVLKVSQGHRL----- 224 (268)
T ss_dssp E---CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH--------HHHHHHHHTTCCC-----
T ss_pred c---ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh--------HHHHHHHHcCCCC-----
Confidence 1 123346778999999988889999999999999999999 9999975332 1111111111100
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
.. .......+.+++.+||+.||++|||+.|+++.|+.+.++
T Consensus 225 --~~---~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 225 --YR---PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp --CC---CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred --CC---CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 00 111224577788899999999999999999999998654
No 28
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.1e-43 Score=362.16 Aligned_cols=249 Identities=27% Similarity=0.378 Sum_probs=204.3
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC-ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS-QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
.++|+..+.||+|+||.||+|.. .+++.||+|++... ....+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 46799999999999999999994 67899999998653 34567789999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++|+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (297)
T 3fxz_A 99 LAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (297)
T ss_dssp CTTCBHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred CCCCCHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence 9999999998653 389999999999999999999999 99999999999999999999999999998765433
Q ss_pred CcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ............
T Consensus 171 ~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~~~~~~~~~~~---- 234 (297)
T 3fxz_A 171 SKR----STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL--------RALYLIATNGTP---- 234 (297)
T ss_dssp CCB----CCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHHCSC----
T ss_pred ccc----CCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCC----
Confidence 322 2335899999999999999999999999999999999999999753321 111111110000
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. ..........+.+++.+||+.||++|||++|+++
T Consensus 235 --~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 235 --E--LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp --C--CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --C--CCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0 0011223345677888999999999999999975
No 29
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1e-43 Score=366.66 Aligned_cols=274 Identities=22% Similarity=0.286 Sum_probs=212.6
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCC----eeEEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK----ERLLVY 380 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lV~ 380 (618)
.++|++.++||+|+||.||+|+.. ++.||||++............|+.++++++||||+++++++.... ..++||
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 467889999999999999999875 789999999876655666778999999999999999999998754 369999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC-------CCCceecCCCCCCeeeCCCCceEEcccC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC-------NPRIIHRNISSKCILLDGDFEPKLSDFG 453 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------~~~ivH~Dlkp~NIll~~~~~~kl~DfG 453 (618)
||+++|+|.+++... .+++..++.++.|++.||+|||+.+ .++|+||||||+|||++.++.+||+|||
T Consensus 102 e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg 176 (322)
T 3soc_A 102 AFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG 176 (322)
T ss_dssp ECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCT
T ss_pred ecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCC
Confidence 999999999999653 3899999999999999999999862 3379999999999999999999999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCCCCCCC-----CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccc------
Q 007088 454 LARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-----LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK------ 522 (618)
Q Consensus 454 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~------ 522 (618)
+++......... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..........
T Consensus 177 ~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 254 (322)
T 3soc_A 177 LALKFEAGKSAG--DTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254 (322)
T ss_dssp TCEEECTTSCCC--CCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred cccccccccCcc--ccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence 998765433221 1223458999999999876 356678999999999999999999998654322111
Q ss_pred --cCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 523 --GSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 523 --~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
.....+........ ....+.... ........+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 255 ~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 255 QHPSLEDMQEVVVHKK-KRPVLRDYW---QKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp SSCCHHHHHHHHTTSC-CCCCCCGGG---GSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred cCCchhhhhhhhhccc-CCCCccccc---cccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 01112221111111 000001000 01245667889999999999999999999999999997754
No 30
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=5.7e-44 Score=369.05 Aligned_cols=261 Identities=24% Similarity=0.382 Sum_probs=209.2
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC----CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP----GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
.++|.+.+.||+|+||.||+|... .+..||||+++... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 357888999999999999999963 45679999997642 345679999999999999999999999999999999
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 128 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHD---GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp EEECCTTCBHHHHHHTTT---TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EeeCCCCCcHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 999999999999996543 3589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
......... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... .+.........
T Consensus 202 ~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--------~~~~~~~~~~~- 271 (325)
T 3kul_A 202 EDDPDAAYT-TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN--------RDVISSVEEGY- 271 (325)
T ss_dssp C----CCEE-CC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH--------HHHHHHHHTTC-
T ss_pred ccCccceee-ccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH--------HHHHHHHHcCC-
Confidence 543222111 122336788999999988899999999999999999999 9999975332 11111111110
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
...........+.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 272 ---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 272 ---------RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp ---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred ---------CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 01111223356777888999999999999999999999997754
No 31
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.3e-43 Score=373.03 Aligned_cols=263 Identities=22% Similarity=0.359 Sum_probs=211.4
Q ss_pred hccCCCCcEEeecCCeeEEEEEe--------CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcC-CCCCccceeEEEEeC
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML--------PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAK 373 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 373 (618)
.++|.+.+.||+|+||.||+|.. .++..||+|+++... ...+.+.+|+++++++ +||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 36788899999999999999984 245689999997643 3346789999999999 899999999999999
Q ss_pred CeeEEEEeecCCCccccccCCCCC------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee
Q 007088 374 KERLLVYSYLENGTLYDKLHPAEH------------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL 441 (618)
Q Consensus 374 ~~~~lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 441 (618)
+..++||||+++|+|.+++..... ....+++..++.++.||+.||+|||++ +|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 999999999999999999875432 123589999999999999999999999 99999999999999
Q ss_pred CCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCc
Q 007088 442 DGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPES 520 (618)
Q Consensus 442 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~ 520 (618)
+.++.+||+|||+++.......... .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~-- 312 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKK--TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-- 312 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCT--TTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--
T ss_pred CCCCCEEEccccCCcccCcccceec--ccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH--
Confidence 9999999999999987654322111 122346889999999988999999999999999999999 99999754321
Q ss_pred cccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 521 FKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 521 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
.+.... .... ....+......+.+++.+||+.||.+||++.|+++.|+++....
T Consensus 313 ---~~~~~~---~~~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 313 ---ELFKLL---KEGH----------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp ---GHHHHH---HTTC----------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ---HHHHHH---hcCC----------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 111111 1110 01111223346777888999999999999999999999987643
No 32
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.9e-43 Score=365.94 Aligned_cols=283 Identities=15% Similarity=0.125 Sum_probs=223.9
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEEEee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+++++++ +||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 35788999999999999999995 678999999986543 234588999999999 999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCc-----eEEcccCcccc
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE-----PKLSDFGLARL 457 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~DfG~a~~ 457 (618)
+ +++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++.
T Consensus 87 ~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~ 159 (330)
T 2izr_A 87 L-GPSLEDLFDLCD---RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159 (330)
T ss_dssp C-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred C-CCCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence 9 899999987542 3599999999999999999999999 9999999999999998887 99999999987
Q ss_pred cCCCCCcccc---cccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhc
Q 007088 458 MNPVDTHLST---FVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT 534 (618)
Q Consensus 458 ~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~ 534 (618)
.......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+.......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~-----~~~~~~~~i~~ 234 (330)
T 2izr_A 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD-----TLKERYQKIGD 234 (330)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS-----SHHHHHHHHHH
T ss_pred eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc-----cHHHHHHHHHh
Confidence 6443221111 112345899999999999999999999999999999999999999865432 11111111100
Q ss_pred CCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCCCCCCcccCCCCCCCC
Q 007088 535 NSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTTDDEIMLPSNTGDP 607 (618)
Q Consensus 535 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~~~~~~~~~ 607 (618)
.. ........... .+ .+.+++.+|++.||.+||++++|.+.|+++.++.+...+..++|......+
T Consensus 235 ~~---~~~~~~~~~~~---~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~~~~~~~ 300 (330)
T 2izr_A 235 TK---RATPIEVLCEN---FP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWIGKQLPT 300 (330)
T ss_dssp HH---HHSCHHHHTTT---CH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCCSCCCTTTTSCCCC
T ss_pred hh---ccCCHHHHhcc---Ch-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCccCCCCCcCC
Confidence 00 00000000011 12 677888899999999999999999999999999988888888887554443
No 33
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=8e-44 Score=360.23 Aligned_cols=259 Identities=20% Similarity=0.319 Sum_probs=211.8
Q ss_pred hhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
..++|++.+.||+|+||.||++...++..||+|+++......+++.+|++++.+++||||+++++++.+.+..++||||+
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 34678889999999999999999989999999999887777888999999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 102 ~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 175 (283)
T 3gen_A 102 ANGCLLNYLREMR---HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 175 (283)
T ss_dssp TTCBHHHHHHCGG---GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH
T ss_pred CCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccccc
Confidence 9999999997643 3599999999999999999999999 999999999999999999999999999987654221
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
.......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..... ............
T Consensus 176 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~--------~~~~~~~~~~~~----- 239 (283)
T 3gen_A 176 ---TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN--------SETAEHIAQGLR----- 239 (283)
T ss_dssp ---HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH--------HHHHHHHHTTCC-----
T ss_pred ---ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh--------hHHHHHHhcccC-----
Confidence 11223346788999999988889999999999999999998 9999975332 111111111100
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
..........+.+++.+||+.||.+|||++|+++.|+++.++
T Consensus 240 -----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 240 -----LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp -----CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -----CCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 001111234577788899999999999999999999998764
No 34
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.3e-43 Score=370.51 Aligned_cols=286 Identities=14% Similarity=0.181 Sum_probs=217.7
Q ss_pred hhccCCCCcEEeecCCeeEEEEEeCC------CcEEEEEEeccCccC------------HHHHHHHHHHHhcCCCCCccc
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAMLPG------GCFIMIKRLEDSQHS------------EKEFLSEINTLGSVRHRNLVP 365 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~------------~~~~~~E~~~l~~l~h~niv~ 365 (618)
..++|.+.+.||+|+||.||+|...+ ++.||||++...... ...+..|+..+..++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 35689999999999999999999654 478999998654311 122445666778889999999
Q ss_pred eeEEEEeC----CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee
Q 007088 366 LLGFCVAK----KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL 441 (618)
Q Consensus 366 l~~~~~~~----~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 441 (618)
+++++... ...++||||+ +++|.+++.... ..+++..++.++.||+.||+|||++ +|+||||||+|||+
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill 185 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA---KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLL 185 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEE
Confidence 99998775 4579999999 999999997643 4599999999999999999999999 99999999999999
Q ss_pred C--CCCceEEcccCcccccCCCCCccc---ccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 007088 442 D--GDFEPKLSDFGLARLMNPVDTHLS---TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516 (618)
Q Consensus 442 ~--~~~~~kl~DfG~a~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~ 516 (618)
+ .++.+||+|||+++.......... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~ 265 (364)
T 3op5_A 186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL 265 (364)
T ss_dssp ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence 9 889999999999987654322111 11123448999999999999999999999999999999999999997532
Q ss_pred CCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCCCCCC
Q 007088 517 APESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTTDD 596 (618)
Q Consensus 517 ~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~ 596 (618)
... ....+..... ...+...+++.+..... +..+.+++..||+.||.+||+++++++.|+++.++.+...+.
T Consensus 266 ~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~ 337 (364)
T 3op5_A 266 KDP----KYVRDSKIRY-RENIASLMDKCFPAANA---PGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDG 337 (364)
T ss_dssp TCH----HHHHHHHHHH-HHCHHHHHHHHSCTTCC---CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCCC
T ss_pred cCH----HHHHHHHHHh-hhhHHHHHHHhcccccC---HHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcCC
Confidence 211 1111111111 11223333333322222 345667777999999999999999999999999999999988
Q ss_pred cccCCCCC
Q 007088 597 EIMLPSNT 604 (618)
Q Consensus 597 ~~~~~~~~ 604 (618)
.++|....
T Consensus 338 ~~dw~~~~ 345 (364)
T 3op5_A 338 KLDLSVVE 345 (364)
T ss_dssp CCCC----
T ss_pred ccceEecc
Confidence 88886443
No 35
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4.6e-42 Score=354.13 Aligned_cols=260 Identities=22% Similarity=0.310 Sum_probs=211.3
Q ss_pred cccCHHHHHHhhcc----------CCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccC-ccCHHHHHHHHHHHhcCCCC
Q 007088 294 EKMRLSDLMKATNS----------FSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDS-QHSEKEFLSEINTLGSVRHR 361 (618)
Q Consensus 294 ~~~~~~~l~~~~~~----------y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~ 361 (618)
..++.+++..+++. |+..+.||+|+||.||+|+.. +|+.||||++... ....+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45788888888864 677789999999999999965 7999999999654 34567789999999999999
Q ss_pred CccceeEEEEeCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee
Q 007088 362 NLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL 441 (618)
Q Consensus 362 niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 441 (618)
||+++++++...+..++||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll 174 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILL 174 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEE
Confidence 9999999999999999999999999999998643 489999999999999999999999 99999999999999
Q ss_pred CCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcc
Q 007088 442 DGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESF 521 (618)
Q Consensus 442 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~ 521 (618)
+.++.+||+|||++.......... ....||+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 175 ~~~~~~kl~Dfg~~~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~---- 246 (321)
T 2c30_A 175 TLDGRVKLSDFGFCAQISKDVPKR----KSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP---- 246 (321)
T ss_dssp CTTCCEEECCCTTCEECCSSSCCB----CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH----
T ss_pred CCCCcEEEeeeeeeeecccCcccc----ccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----
Confidence 999999999999998765432221 233589999999999999999999999999999999999999975321
Q ss_pred ccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 522 KGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 522 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
........... .+.+. ........+.+++.+||+.||++|||++|+++
T Consensus 247 ----~~~~~~~~~~~------~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 247 ----VQAMKRLRDSP------PPKLK--NSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp ----HHHHHHHHHSS------CCCCT--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ----HHHHHHHhcCC------CCCcC--ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111111111 00000 01112345677777999999999999999976
No 36
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.3e-43 Score=373.25 Aligned_cols=261 Identities=23% Similarity=0.363 Sum_probs=200.2
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC----CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP----GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
.++|++.+.||+|+||.||+|+.. ++..||||+++... ...+++.+|+.++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357999999999999999999854 57889999997542 345679999999999999999999999999999999
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
||||+++|+|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 124 v~e~~~~~sL~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp EEECCTTCBHHHHHHTTT---TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEeCCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence 999999999999997543 3589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
......... .....++..|+|||++.+..++.++||||||+++|||++ |+.||..... .+........
T Consensus 198 ~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~--------~~~~~~i~~~-- 266 (373)
T 2qol_A 198 EDDPEAAYT-TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN--------QDVIKAVDEG-- 266 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH--------HHHHHHHHTT--
T ss_pred ccCCcccee-ccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcC--
Confidence 543221111 112235778999999998899999999999999999998 9999975332 1111111111
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
............+.+++.+||+.||++||++.|+++.|+++.+..
T Consensus 267 --------~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 267 --------YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp --------EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred --------CCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 111112233456778888999999999999999999999997654
No 37
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.1e-43 Score=383.80 Aligned_cols=260 Identities=24% Similarity=0.371 Sum_probs=213.5
Q ss_pred hhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
..++|...+.||+|+||.||+|...++..||||+++......+.+.+|+.++++++||||+++++++. .+..++||||+
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~ 264 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM 264 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence 45678889999999999999999988999999999887777889999999999999999999999986 56789999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
++|+|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 265 ~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~ 339 (454)
T 1qcf_A 265 AKGSLLDFLKSDEG--SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339 (454)
T ss_dssp TTCBHHHHHHSHHH--HTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH
T ss_pred CCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce
Confidence 99999999975432 3588999999999999999999999 999999999999999999999999999987653211
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
.......++..|+|||.+.+..++.++|||||||++|||++ |+.||..... .+..........
T Consensus 340 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~--------~~~~~~i~~~~~----- 403 (454)
T 1qcf_A 340 ---TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--------PEVIRALERGYR----- 403 (454)
T ss_dssp ---HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHHHHHHHHTCC-----
T ss_pred ---eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCC-----
Confidence 11122336788999999988899999999999999999999 9999975332 111111111111
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
...+......+.+++.+||+.||++|||+++|++.|+++....
T Consensus 404 -----~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 404 -----MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred -----CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 1111223456778888999999999999999999999886543
No 38
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=5.4e-44 Score=376.97 Aligned_cols=260 Identities=21% Similarity=0.309 Sum_probs=209.4
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
.++|...+.||+|+||.||+|... +++.||||+++... ...+++.+|++++++++||||+++++++.+.+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 457888999999999999999975 78999999997542 223468899999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 193 ~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~ 266 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266 (377)
T ss_dssp CCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred cCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence 999999999997543 3589999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
... .......++..|+|||.+.+..++.++|||||||++|||++ |+.||..... .+..........
T Consensus 267 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~--------~~~~~~~~~~~~--- 333 (377)
T 3cbl_A 267 VYA--ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN--------QQTREFVEKGGR--- 333 (377)
T ss_dssp EEE--CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH--------HHHHHHHHTTCC---
T ss_pred cee--ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCC---
Confidence 111 11111225678999999988889999999999999999998 9999975332 111111111111
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
...+......+.+++.+||+.||++|||++++++.|+++.+++
T Consensus 334 -------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 334 -------LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 0111223346777888999999999999999999999998764
No 39
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.9e-43 Score=365.19 Aligned_cols=246 Identities=22% Similarity=0.301 Sum_probs=202.4
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
.++|++.+.||+|+||.||+|.. .+|+.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46799999999999999999996 689999999997543 33456889999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG----RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp CCCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred ECCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 9999999999986543 489999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCC-CccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVAT-PKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
... .....||+.|+|||++.+..+. .++||||+||++|||++|+.||..... .+..........
T Consensus 167 ~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------~~~~~~i~~~~~-- 231 (328)
T 3fe3_A 167 GGK-----LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL--------KELRERVLRGKY-- 231 (328)
T ss_dssp SCG-----GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCC--
T ss_pred CCc-----cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCC--
Confidence 322 2234589999999999887765 799999999999999999999975321 222222211110
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. .+......+.+++.+||+.||.+|||++|+++
T Consensus 232 -----~----~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 232 -----R----IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp -----C----CCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred -----C----CCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 01112345667777999999999999999975
No 40
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.8e-43 Score=362.52 Aligned_cols=250 Identities=20% Similarity=0.278 Sum_probs=196.1
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
..++|++.+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 357899999999999999999995 678999999996543 23356889999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 88 E~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD----RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp ECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred eCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 9999999999986543 499999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVA-TPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
.... ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||..... ............
T Consensus 161 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~~-- 227 (347)
T 3zgw_A 161 NKDY---HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV--------MALYKKIMRGKY-- 227 (347)
T ss_dssp --------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCC--
T ss_pred CCCc---cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHcCCC--
Confidence 2221 1223458999999999988775 8999999999999999999999975321 122221111110
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.+ +......+.+++.+||+.||++|||++|+++.
T Consensus 228 -----~~----p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 228 -----DV----PKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp -----CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -----CC----CCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 00 11122345667779999999999999999864
No 41
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.3e-42 Score=353.97 Aligned_cols=278 Identities=15% Similarity=0.117 Sum_probs=221.0
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEEEee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
.++|++.+.||+|+||.||+|.. .+++.||+|++.... ..+.+.+|+.++.++ +|+|++++++++.+....++||||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 35789999999999999999994 679999999986543 334578899999999 799999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCc-----eEEcccCcccc
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE-----PKLSDFGLARL 457 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~DfG~a~~ 457 (618)
+ +++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+++.
T Consensus 88 ~-~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~ 160 (298)
T 1csn_A 88 L-GPSLEDLLDLCG---RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160 (298)
T ss_dssp C-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred c-CCCHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence 9 899999997543 3589999999999999999999999 9999999999999987776 99999999987
Q ss_pred cCCCCCccc---ccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhc
Q 007088 458 MNPVDTHLS---TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT 534 (618)
Q Consensus 458 ~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~ 534 (618)
......... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||......... ..+........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~- 238 (298)
T 1csn_A 161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNK-QKYERIGEKKQ- 238 (298)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHH-HHHHHHHHHHH-
T ss_pred cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccH-HHHHHHHhhcc-
Confidence 654322111 1123345899999999999999999999999999999999999999865432110 01111110000
Q ss_pred CCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCCCCCCcccCC
Q 007088 535 NSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTTDDEIMLP 601 (618)
Q Consensus 535 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~~~ 601 (618)
...... +. ......+.+++.+||+.||++||++++|++.|+++.++.....++.++|.
T Consensus 239 ~~~~~~-----~~----~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~ 296 (298)
T 1csn_A 239 STPLRE-----LC----AGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWN 296 (298)
T ss_dssp HSCHHH-----HT----TTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCSCSCCGGG
T ss_pred CccHHH-----HH----hhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCCCCCccccC
Confidence 000000 00 11234677788899999999999999999999999999998888888885
No 42
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=7.8e-43 Score=361.78 Aligned_cols=247 Identities=20% Similarity=0.246 Sum_probs=202.2
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC----ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS----QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
.++|+..+.||+|+||.||+|+. .+|+.||+|++++. ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 36789999999999999999995 46899999999753 34566788999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++...
T Consensus 84 ~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER----VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 99999999999986543 489999999999999999999999 99999999999999999999999999998643
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
..... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ............
T Consensus 157 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~~-- 222 (337)
T 1o6l_A 157 SDGAT----MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------ERLFELILMEEI-- 222 (337)
T ss_dssp CTTCC----BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCC--
T ss_pred cCCCc----ccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCC--
Confidence 32221 1233489999999999999999999999999999999999999975321 111111111100
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERH-----TMFEVYQ 581 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 581 (618)
.+ +......+.+++.+||+.||++|| +++|+++
T Consensus 223 -----~~----p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 223 -----RF----PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp -----CC----CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -----CC----CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 01 111223566777799999999999 8999865
No 43
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.7e-42 Score=357.89 Aligned_cols=280 Identities=25% Similarity=0.366 Sum_probs=208.3
Q ss_pred CHHHHHHhhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcC--CCCCccceeEEEEeC-
Q 007088 297 RLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSV--RHRNLVPLLGFCVAK- 373 (618)
Q Consensus 297 ~~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~- 373 (618)
....-....++|++.+.||+|+||.||+|+.. ++.||||++.... ...+..|.+++... +||||+++++++...
T Consensus 28 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~ 104 (337)
T 3mdy_A 28 PLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--EASWFRETEIYQTVLMRHENILGFIAADIKGT 104 (337)
T ss_dssp CHHHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred CcccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc--cchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence 33344445678999999999999999999975 8999999986543 33445566665554 899999999999887
Q ss_pred ---CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC-----CCCceecCCCCCCeeeCCCC
Q 007088 374 ---KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC-----NPRIIHRNISSKCILLDGDF 445 (618)
Q Consensus 374 ---~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~Dlkp~NIll~~~~ 445 (618)
...++||||+++|+|.+++... .+++..++.++.|++.||+|||+.+ .++|+||||||+||+++.++
T Consensus 105 ~~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~ 179 (337)
T 3mdy_A 105 GSWTQLYLITDYHENGSLYDYLKST-----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNG 179 (337)
T ss_dssp GGGCEEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTS
T ss_pred CCCCceEEEEeccCCCcHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCC
Confidence 6789999999999999999543 4899999999999999999999762 34899999999999999999
Q ss_pred ceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCc------cchHHHHHHHHHHHhC----------C
Q 007088 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPK------GDVYSFGVVLLELITG----------E 509 (618)
Q Consensus 446 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~------sDVwS~Gvil~elltG----------~ 509 (618)
.+||+|||+++.................||+.|+|||++.+...+.+ +|||||||++|||++| +
T Consensus 180 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~ 259 (337)
T 3mdy_A 180 TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQ 259 (337)
T ss_dssp CEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred CEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccc
Confidence 99999999998765443332222234468999999999887766665 9999999999999999 5
Q ss_pred CCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 510 RPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 510 ~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
.||........ .......... ............ ........+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 260 ~p~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 260 LPYHDLVPSDP---SYEDMREIVC-IKKLRPSFPNRW---SSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332 (337)
T ss_dssp CTTTTTSCSSC---CHHHHHHHHT-TSCCCCCCCGGG---GGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ccHhhhcCCCC---chhhhHHHHh-hhccCccccccc---hhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence 55544322211 1112111111 111111111000 0125677888999999999999999999999999999876
Q ss_pred cC
Q 007088 590 YH 591 (618)
Q Consensus 590 ~~ 591 (618)
..
T Consensus 333 ~~ 334 (337)
T 3mdy_A 333 QD 334 (337)
T ss_dssp TT
T ss_pred cc
Confidence 43
No 44
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-43 Score=364.07 Aligned_cols=251 Identities=19% Similarity=0.266 Sum_probs=205.6
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
.++|++.+.||+|+||.||+|.. .+++.||+|.+.........+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 83 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI 83 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence 46799999999999999999995 46899999999876666677899999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC--CCceEEcccCcccccCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG--DFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~DfG~a~~~~~~ 461 (618)
++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.....
T Consensus 84 ~g~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~ 157 (321)
T 1tki_A 84 SGLDIFERINTSA---FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157 (321)
T ss_dssp CCCBHHHHHTSSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred CCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC
Confidence 9999999997643 3589999999999999999999999 9999999999999987 789999999999877543
Q ss_pred CCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchh
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETA 541 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 541 (618)
... ....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+...........
T Consensus 158 ~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~i~~~~~~--- 221 (321)
T 1tki_A 158 DNF-----RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN--------QQIIENIMNAEYT--- 221 (321)
T ss_dssp CEE-----EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHHTCCC---
T ss_pred Ccc-----ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH--------HHHHHHHHcCCCC---
Confidence 321 122389999999999988899999999999999999999999975332 1111111111100
Q ss_pred ccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 542 IDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 542 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+... .......+.+++.+||..||++|||+.|+++
T Consensus 222 ~~~~~----~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 222 FDEEA----FKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp CCHHH----HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CChhh----hccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00000 0112345677888999999999999999987
No 45
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=4.2e-43 Score=357.27 Aligned_cols=270 Identities=23% Similarity=0.338 Sum_probs=205.3
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-----CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeC--Cee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-----PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK--KER 376 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 376 (618)
.++|++.+.||+|+||.||+|++ .+++.||+|++.... ...+.+.+|++++++++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 35788899999999999999984 368999999997643 3346789999999999999999999998654 458
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCG---GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred EEEEEeCCCCCHHHHHHhcc---cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 99999999999999997653 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCC-------CccccCHHHHH
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAP-------ESFKGSLVEWI 529 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~-------~~~~~~l~~~~ 529 (618)
......... .......++..|+|||.+.+..++.++||||||+++|||++|..|+...... ...........
T Consensus 163 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (295)
T 3ugc_A 163 VLPQDKEFF-KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241 (295)
T ss_dssp --------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred cccCCccee-eeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHH
Confidence 765432211 1112234678899999998889999999999999999999999998642110 00000000000
Q ss_pred HHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 530 TLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 530 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
... +...............+.+++.+||+.||++|||++|+++.|+++.++.
T Consensus 242 ~~~---------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 242 IEL---------LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHH---------HHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHH---------HhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 000 0111111112233456778888999999999999999999999998764
No 46
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.7e-43 Score=352.03 Aligned_cols=257 Identities=23% Similarity=0.352 Sum_probs=213.2
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
++|+..+.||+|+||.||++...++..||+|++.......+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEH 87 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCC
Confidence 57888999999999999999988899999999988777778899999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
++|.+++.... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 88 ~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~--- 158 (267)
T 3t9t_A 88 GCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ--- 158 (267)
T ss_dssp CBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH---
T ss_pred CcHHHHHhhCc---ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccc---
Confidence 99999997543 3589999999999999999999999 99999999999999999999999999998764321
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDK 544 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 544 (618)
........++..|+|||.+.+..++.++||||||+++|||++ |+.||..... .+..........
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~i~~~~~------- 223 (267)
T 3t9t_A 159 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--------SEVVEDISTGFR------- 223 (267)
T ss_dssp HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTTCC-------
T ss_pred ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH--------HHHHHHHhcCCc-------
Confidence 111223346789999999988889999999999999999999 8999875321 111211111100
Q ss_pred cccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 545 SLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 545 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
..........+.+++.+||+.||++||++.|+++.|+++.++
T Consensus 224 ---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 224 ---LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ---CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 000111234567778899999999999999999999999764
No 47
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.7e-43 Score=357.67 Aligned_cols=263 Identities=21% Similarity=0.305 Sum_probs=205.8
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
.++|++.+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 35788999999999999999995 568999999985432 2346788999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++|+|.+++.... ++++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG----PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EeCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 99999999999986543 489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
...... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ........... ..
T Consensus 163 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~--------~~~~~~~~~~~-~~ 230 (294)
T 4eqm_A 163 ETSLTQ---TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA--------VSIAIKHIQDS-VP 230 (294)
T ss_dssp ---------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH--------HHHHHHHHSSC-CC
T ss_pred cccccc---cCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHhhcc-CC
Confidence 432211 1223489999999999999999999999999999999999999975332 11111111110 00
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHhhhhcC
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERH-TMFEVYQLLRAIAERYH 591 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~i~~~~~ 591 (618)
.. .... .......+.+++.+|++.||.+|| +++++.+.|+.+..+..
T Consensus 231 ~~-~~~~----~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~ 278 (294)
T 4eqm_A 231 NV-TTDV----RKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENR 278 (294)
T ss_dssp CH-HHHS----CTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred Cc-chhc----ccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence 00 0001 112234677788899999999998 99999999998765443
No 48
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.2e-43 Score=364.21 Aligned_cols=280 Identities=19% Similarity=0.306 Sum_probs=197.0
Q ss_pred HhhccCCCCcEEeecCCeeEEEEEeCC-C---cEEEEEEeccC---ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 007088 303 KATNSFSKNNIIGTGRTGATYIAMLPG-G---CFIMIKRLEDS---QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKE 375 (618)
Q Consensus 303 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~-~---~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 375 (618)
...++|++.+.||+|+||.||+|.... + ..||+|+++.. ....+.+.+|++++++++||||+++++++...+.
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 345689999999999999999999543 3 28999999753 2345678999999999999999999999988765
Q ss_pred e------EEEEeecCCCccccccCCCCC--CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCce
Q 007088 376 R------LLVYSYLENGTLYDKLHPAEH--EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEP 447 (618)
Q Consensus 376 ~------~lV~e~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 447 (618)
. ++||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 5 999999999999999864321 223589999999999999999999999 99999999999999999999
Q ss_pred EEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHH
Q 007088 448 KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLV 526 (618)
Q Consensus 448 kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~ 526 (618)
||+|||+++.......... .....+++.|+|||.+.+..++.++|||||||++|||++ |+.||...... ...
T Consensus 177 kl~Dfg~a~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~~ 249 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQ--GCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA-----EIY 249 (323)
T ss_dssp EECCCCC-------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHH
T ss_pred EEeeccccccccccccccc--cccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH-----HHH
Confidence 9999999987654322111 112336788999999988899999999999999999999 99999764322 111
Q ss_pred HHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCCCCCCcccCCCCCC
Q 007088 527 EWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTTDDEIMLPSNTG 605 (618)
Q Consensus 527 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~~~~~~~ 605 (618)
.. ...... ..........+.+++.+||+.||++|||+.|+++.|+++...........-++...++
T Consensus 250 ~~---~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~~pl~~~~~ 315 (323)
T 3qup_A 250 NY---LIGGNR----------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDPLYINIE 315 (323)
T ss_dssp HH---HHTTCC----------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC----------------
T ss_pred HH---HhcCCC----------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCCCCCCCCCC
Confidence 11 111110 0111223346778888999999999999999999999998876665555555554443
No 49
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=9e-43 Score=368.34 Aligned_cols=267 Identities=22% Similarity=0.342 Sum_probs=214.1
Q ss_pred hccCCCCcEEeecCCeeEEEEEe--------CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcC-CCCCccceeEEEEeC
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML--------PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAK 373 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 373 (618)
.++|.+.+.||+|+||.||+|.. ..+..||+|+++... ...+++.+|+++++++ +||||+++++++.+.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 46788899999999999999984 234689999997643 3346789999999999 999999999999999
Q ss_pred CeeEEEEeecCCCccccccCCCCC------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee
Q 007088 374 KERLLVYSYLENGTLYDKLHPAEH------------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL 441 (618)
Q Consensus 374 ~~~~lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 441 (618)
+..++||||+++|+|.+++..... ....+++..++.++.||+.||+|||+. +|+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEE
Confidence 999999999999999999875432 124599999999999999999999999 99999999999999
Q ss_pred CCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCc
Q 007088 442 DGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPES 520 (618)
Q Consensus 442 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~ 520 (618)
+.++.+||+|||+++.......... .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~--- 299 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKK--TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--- 299 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCC--CTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH---
T ss_pred cCCCcEEEcccCccccccccccccc--ccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH---
Confidence 9999999999999987654322111 122347889999999999999999999999999999999 9999875321
Q ss_pred cccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCCCC
Q 007088 521 FKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTT 594 (618)
Q Consensus 521 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 594 (618)
.+.......... ..........+.+++.+||+.||++|||++|+++.|+++........
T Consensus 300 -----~~~~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~ 358 (382)
T 3tt0_A 300 -----EELFKLLKEGHR----------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQE 358 (382)
T ss_dssp -----HHHHHHHHTTCC----------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC
T ss_pred -----HHHHHHHHcCCC----------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCC
Confidence 122222211111 01111223467778889999999999999999999999987665444
No 50
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.3e-42 Score=353.29 Aligned_cols=274 Identities=20% Similarity=0.277 Sum_probs=214.1
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCC--eeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK--ERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lV~ 380 (618)
++|.+.++||+|+||.||+|... +++.||||+++... ...+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 57888999999999999999964 58999999997533 44677889999999999999999999998765 679999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee----CCCCceEEcccCccc
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL----DGDFEPKLSDFGLAR 456 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DfG~a~ 456 (618)
||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 89 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp ECCTTCBHHHHHHSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred eCCCCCCHHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 99999999999976542 23489999999999999999999999 99999999999999 788889999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCC--------CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHH
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPR--------TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEW 528 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~ 528 (618)
........ ....||+.|+|||++. +..++.++|||||||++|||++|+.||............+...
T Consensus 165 ~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 239 (319)
T 4euu_A 165 ELEDDEQF-----VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI 239 (319)
T ss_dssp ECCTTCCB-----CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHH
T ss_pred ecCCCCce-----eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHH
Confidence 76543322 2234899999999875 5788999999999999999999999997654432222222222
Q ss_pred HHHHhcCCccchh---------ccccc--cCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 529 ITLLNTNSSLETA---------IDKSL--LGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 529 ~~~~~~~~~~~~~---------~d~~l--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
..... ....... ....+ ...........+.+++.+||+.||++|||++|+++...+.+..
T Consensus 240 ~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~ 310 (319)
T 4euu_A 240 ITGKP-SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (319)
T ss_dssp HHHCC-TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC-
T ss_pred hcCCC-cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhc
Confidence 21111 1000000 00011 1123456777888999999999999999999999998876543
No 51
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=5.5e-43 Score=359.40 Aligned_cols=262 Identities=22% Similarity=0.319 Sum_probs=201.1
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
.++|++.++||+|+||.||+|...+++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 46799999999999999999999889999999997543 224678899999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+++ +|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 100 ~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 100 FMEK-DLKKVLDENK---TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp CCSE-EHHHHHHTCT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred CCCC-CHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 9985 8888776543 3589999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCc--c
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSS--L 538 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~--~ 538 (618)
.... ....||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ .+............ .
T Consensus 173 ~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----~~~~i~~~~~~~~~~~~ 244 (311)
T 3niz_A 173 VRSY----THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD----QLPKIFSILGTPNPREW 244 (311)
T ss_dssp CC-------CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT----HHHHHHHHHCCCCTTTS
T ss_pred cccc----cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHHHHCCCChHHh
Confidence 2221 22348999999998876 568999999999999999999999997654322 11221111111000 0
Q ss_pred chh------ccccc--cCCC-----CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 539 ETA------IDKSL--LGNG-----FDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 539 ~~~------~d~~l--~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
... .+... .... ......++.+++.+||+.||++|||++|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 245 PQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp GGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000 00000 0000 0112346678888999999999999999975
No 52
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=7e-43 Score=358.61 Aligned_cols=262 Identities=23% Similarity=0.351 Sum_probs=211.2
Q ss_pred hccCCCCcEEeecCCeeEEEEEe------CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML------PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 376 (618)
.++|.+.+.||+|+||.||+|.. .+++.||+|+++... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 56788999999999999999985 345899999997543 3346788999999999999999999999999999
Q ss_pred EEEEeecCCCccccccCCCCC--------------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCC
Q 007088 377 LLVYSYLENGTLYDKLHPAEH--------------------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISS 436 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 436 (618)
++||||+++|+|.+++..... ....+++..++.++.||+.||+|||++ +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 999999999999999875432 123489999999999999999999999 999999999
Q ss_pred CCeeeCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 007088 437 KCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLT 515 (618)
Q Consensus 437 ~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~ 515 (618)
+||+++.++.+||+|||+++.......... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVK--RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEEC--SSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred heEEEcCCCCEEEcccccccccccccccee--ccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999987654332211 122346789999999988889999999999999999999 99999754
Q ss_pred CCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 516 NAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 516 ~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
... .+...... .. ...........+.+++.+||+.||++||++.|+++.|+++.++
T Consensus 257 ~~~-----~~~~~~~~---~~----------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 257 PPE-----RLFNLLKT---GH----------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp CGG-----GHHHHHHT---TC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CHH-----HHHHHhhc---CC----------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 321 11111111 10 0011122334677788899999999999999999999998765
No 53
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.3e-43 Score=369.54 Aligned_cols=272 Identities=22% Similarity=0.313 Sum_probs=213.9
Q ss_pred cCHHHHHHhhccCCCCcEEeecCCeeEEEEEe------CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcC-CCCCccce
Q 007088 296 MRLSDLMKATNSFSKNNIIGTGRTGATYIAML------PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSV-RHRNLVPL 366 (618)
Q Consensus 296 ~~~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l 366 (618)
+...+.....++|.+.+.||+|+||.||+|.. .+++.||||+++... ...+.+.+|++++.++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 34455566778999999999999999999973 346899999997643 2345689999999999 79999999
Q ss_pred eEEEEeCCe-eEEEEeecCCCccccccCCCCCC-----------------------------------------------
Q 007088 367 LGFCVAKKE-RLLVYSYLENGTLYDKLHPAEHE----------------------------------------------- 398 (618)
Q Consensus 367 ~~~~~~~~~-~~lV~e~~~~gsL~~~l~~~~~~----------------------------------------------- 398 (618)
++++.+.+. .++||||+++|+|.+++......
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 999987654 89999999999999998765421
Q ss_pred ---------------CcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 399 ---------------VMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 399 ---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 12289999999999999999999999 999999999999999999999999999987643322
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
.. ......||+.|+|||++.+..++.++|||||||++|||++ |+.||......+ .+..... ....
T Consensus 249 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----~~~~~~~---~~~~----- 314 (359)
T 3vhe_A 249 YV--RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRRLK---EGTR----- 314 (359)
T ss_dssp CE--EC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH----HHHHHHH---HTCC-----
T ss_pred ch--hccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH----HHHHHHH---cCCC-----
Confidence 11 1122347889999999988899999999999999999998 999997643321 1111111 1100
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
..........+.+++.+||+.||.+|||+.|+++.|+++.+.
T Consensus 315 -----~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 315 -----MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp -----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -----CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 001111234577788899999999999999999999998764
No 54
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.2e-42 Score=363.77 Aligned_cols=250 Identities=20% Similarity=0.273 Sum_probs=202.9
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc-------cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ-------HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 376 (618)
.++|++.+.||+|+||.||+|.. .+|+.||+|+++... ...+.+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 46789999999999999999995 468999999996532 1357899999999999999999999999999999
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC----ceEEccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF----EPKLSDF 452 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Df 452 (618)
++||||+++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+||+++.++ .+||+||
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 99999999999999997643 499999999999999999999999 999999999999998877 7999999
Q ss_pred CcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHH
Q 007088 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLL 532 (618)
Q Consensus 453 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~ 532 (618)
|+++....... .....||+.|+|||++.+..++.++|||||||++|+|++|..||..... .+.....
T Consensus 164 G~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~--------~~~~~~i 230 (361)
T 2yab_A 164 GLAHEIEDGVE-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--------QETLANI 230 (361)
T ss_dssp SSCEECCTTCC-----CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHHH
T ss_pred CCceEcCCCCc-----cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHH
Confidence 99987654322 1234589999999999999999999999999999999999999975332 1111111
Q ss_pred hcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 533 NTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 533 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..... ..++... ......+.+++.+||..||++|||+.|+++
T Consensus 231 ~~~~~---~~~~~~~----~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 231 TAVSY---DFDEEFF----SQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HTTCC---CCCHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HhcCC---CCCchhc----cCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11100 0000000 111245667777999999999999999974
No 55
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=8.8e-43 Score=360.50 Aligned_cols=257 Identities=23% Similarity=0.388 Sum_probs=202.2
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCc----EEEEEEeccC--ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGC----FIMIKRLEDS--QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
++|+..++||+|+||.||+|+. .+++ +||+|.+... ....+++.+|+.++++++||||+++++++.+.+ .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 5688899999999999999995 3444 4688888543 345678999999999999999999999998755 789
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
|+||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 94 v~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEECCTTCBHHHHHHHST---TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred EEEecCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence 999999999999987644 3589999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
........ .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+...... ..
T Consensus 168 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~~~~~---~~- 236 (327)
T 3poz_A 168 GAEEKEYH--AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-----EISSILEK---GE- 236 (327)
T ss_dssp TTTCC---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHHHHT---TC-
T ss_pred cCCccccc--ccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH-----HHHHHHHc---CC-
Confidence 54332221 122346889999999999999999999999999999999 99999754321 12221111 10
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
...........+.+++.+||+.||++||++.|+++.|+.+...
T Consensus 237 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 237 ---------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ---------CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred ---------CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 0111122344677888899999999999999999999998753
No 56
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.2e-42 Score=358.73 Aligned_cols=252 Identities=24% Similarity=0.357 Sum_probs=200.4
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
.++|++.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 367899999999999999999954 78999999986433 234568899999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 86 YCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp CCTTEEGGGGSBTTT----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred cCCCCcHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence 999999999997653 499999999999999999999999 9999999999999999999999999999865422
Q ss_pred CCcccccccCCCCcccccCCCCCCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVA-TPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
.. ........||+.|+|||++.+..+ +.++|||||||++|||++|+.||....... .....+.. .....
T Consensus 159 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~~~~~---~~~~~-- 228 (323)
T 3tki_A 159 NR--ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC---QEYSDWKE---KKTYL-- 228 (323)
T ss_dssp TE--ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS---HHHHHHHT---TCTTS--
T ss_pred Cc--ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH---HHHHHHhc---ccccC--
Confidence 21 111223458999999999877665 779999999999999999999997644321 11111111 10000
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.........+.+++.+||+.||++|||+.|+++
T Consensus 229 --------~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 229 --------NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp --------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --------CccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 001122345667888999999999999999975
No 57
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=4.9e-43 Score=378.40 Aligned_cols=259 Identities=25% Similarity=0.345 Sum_probs=207.5
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecC
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLE 384 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 384 (618)
.++|+..+.||+|+||.||+|...++..||||+++......++|.+|++++++++||||+++++++.+ +..++||||++
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~ 261 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 261 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhc
Confidence 45688899999999999999999888899999998766677889999999999999999999999876 67899999999
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCc
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 464 (618)
+|+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 262 ~gsL~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 336 (452)
T 1fmk_A 262 KGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336 (452)
T ss_dssp TCBHHHHHSHHHH--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCcee
Confidence 9999999975322 3589999999999999999999999 9999999999999999999999999999876532211
Q ss_pred ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 465 LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
......++..|+|||.+.+..++.++|||||||++|||++ |+.||..... .+..........
T Consensus 337 ---~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--------~~~~~~i~~~~~------ 399 (452)
T 1fmk_A 337 ---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--------REVLDQVERGYR------ 399 (452)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHHHTTCC------
T ss_pred ---cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCC------
Confidence 1122336789999999988899999999999999999999 9999975322 111111111110
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
...+......+.+++.+||+.||++|||++++++.|+++....
T Consensus 400 ----~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 400 ----MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred ----CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 1111223456778888999999999999999999999886543
No 58
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.4e-43 Score=383.70 Aligned_cols=259 Identities=23% Similarity=0.377 Sum_probs=214.2
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCC-CcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPG-GCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
.++|+..+.||+|+||.||+|.... +..||||+++......++|.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~ 298 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence 4568889999999999999999754 889999999887777889999999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
++|+|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 299 ~~g~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 373 (495)
T 1opk_A 299 TYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY 373 (495)
T ss_dssp TTCBHHHHHHHSCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE
T ss_pred CCCCHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCce
Confidence 99999999975432 4589999999999999999999999 999999999999999999999999999987653221
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
. ......++..|+|||.+.+..++.++|||||||++|||++ |+.||...... .+.+.+. .
T Consensus 374 ~---~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~-----~~~~~~~---~-------- 434 (495)
T 1opk_A 374 T---AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYELLE---K-------- 434 (495)
T ss_dssp E---CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHHHHHH---T--------
T ss_pred e---ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHH---c--------
Confidence 1 1123336789999999988889999999999999999999 99999764321 1112111 1
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
......+......+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 435 --~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 435 --DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp --TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred --CCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 111111222345677888899999999999999999999987544
No 59
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.1e-42 Score=351.50 Aligned_cols=248 Identities=19% Similarity=0.269 Sum_probs=194.3
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCcc---------------------------CHHHHHHHHHHHh
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQH---------------------------SEKEFLSEINTLG 356 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---------------------------~~~~~~~E~~~l~ 356 (618)
.++|++.+.||+|+||.||+|.. .+++.||+|++..... ..+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 35789999999999999999995 5689999999865321 1246889999999
Q ss_pred cCCCCCccceeEEEEe--CCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCC
Q 007088 357 SVRHRNLVPLLGFCVA--KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNI 434 (618)
Q Consensus 357 ~l~h~niv~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl 434 (618)
+++||||+++++++.+ .+..++||||+++++|.+++.. ..+++..++.++.|++.||+|||++ +|+||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dl 163 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-----KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDI 163 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence 9999999999999987 5678999999999999987643 3589999999999999999999999 9999999
Q ss_pred CCCCeeeCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCC---CCCccchHHHHHHHHHHHhCCCC
Q 007088 435 SSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLV---ATPKGDVYSFGVVLLELITGERP 511 (618)
Q Consensus 435 kp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDVwS~Gvil~elltG~~P 511 (618)
||+||+++.++.+||+|||+++........ .....||+.|+|||.+.+.. ++.++|||||||++|||++|+.|
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p 239 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGSDAL----LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSSSCE----ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCS
T ss_pred CHHHEEECCCCCEEEecCCCcccccccccc----ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCC
Confidence 999999999999999999999876543322 12345899999999987665 37789999999999999999999
Q ss_pred CCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 512 THLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 512 f~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
|.... ............. ...........+.+++.+||+.||++|||+.|+++
T Consensus 240 f~~~~--------~~~~~~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 240 FMDER--------IMCLHSKIKSQAL---------EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp SCCSS--------HHHHHHHHHHCCC---------CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCcc--------HHHHHHHHhcccC---------CCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 97532 1122111111100 00000112345677777999999999999999864
No 60
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=6.4e-43 Score=363.62 Aligned_cols=268 Identities=23% Similarity=0.353 Sum_probs=212.2
Q ss_pred HHHhhccCCCCcEEeecCCeeEEEEEeC------CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 007088 301 LMKATNSFSKNNIIGTGRTGATYIAMLP------GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372 (618)
Q Consensus 301 l~~~~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 372 (618)
+....++|++.+.||+|+||.||+|... +++.||+|+++... ...+.+.+|+.++++++||||+++++++.+
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 3345678999999999999999999963 35899999997643 335678999999999999999999999999
Q ss_pred CCeeEEEEeecCCCccccccCCCCCC--------------------CcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceec
Q 007088 373 KKERLLVYSYLENGTLYDKLHPAEHE--------------------VMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHR 432 (618)
Q Consensus 373 ~~~~~lV~e~~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~ 432 (618)
.+..++||||+++|+|.+++...... ...+++.+++.++.||+.||+|||++ +|+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecC
Confidence 99999999999999999998654211 14699999999999999999999999 99999
Q ss_pred CCCCCCeeeCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCC
Q 007088 433 NISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERP 511 (618)
Q Consensus 433 Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~P 511 (618)
||||+||+++.++.+||+|||+++........ .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.|
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 276 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYY--KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGCB--C----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCccc--cccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999999876432211 11122347889999999988889999999999999999999 9999
Q ss_pred CCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcC
Q 007088 512 THLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYH 591 (618)
Q Consensus 512 f~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (618)
|..... .+........ ... .........+.+++.+||+.||++||++.|+++.|+++.+++.
T Consensus 277 ~~~~~~--------~~~~~~~~~~-~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 277 YYGMAH--------EEVIYYVRDG-NIL---------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp TTTSCH--------HHHHHHHHTT-CCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred CCCCCh--------HHHHHHHhCC-CcC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 975321 1111111111 110 0111223467778889999999999999999999999987664
No 61
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=9.8e-43 Score=349.83 Aligned_cols=253 Identities=26% Similarity=0.384 Sum_probs=193.5
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCc-----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ-----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
.++|+..+.||+|+||.||+|... ++.||+|+++... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 357888999999999999999974 8899999986532 2346789999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC--------CCceEEcc
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG--------DFEPKLSD 451 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--------~~~~kl~D 451 (618)
|||+++++|.+++... .+++..++.++.|++.||+|||++...+|+||||||+||+++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~~~-----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGK-----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHTSS-----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 9999999999998643 4899999999999999999999991112999999999999986 67899999
Q ss_pred cCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHH
Q 007088 452 FGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITL 531 (618)
Q Consensus 452 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~ 531 (618)
||+++........ ...||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .....
T Consensus 160 fg~~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~ 225 (271)
T 3dtc_A 160 FGLAREWHRTTKM------SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL--------AVAYG 225 (271)
T ss_dssp CCC-------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH--------HHHHH
T ss_pred CCccccccccccc------CCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHh
Confidence 9999865543221 234899999999998888999999999999999999999999753311 11111
Q ss_pred HhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 532 LNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 532 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
..... ............+.+++.+||+.||++|||+.|+++.|+++
T Consensus 226 ~~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 226 VAMNK---------LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HHTSC---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred hhcCC---------CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 11110 00111122334677788899999999999999999999864
No 62
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.2e-42 Score=350.81 Aligned_cols=259 Identities=25% Similarity=0.374 Sum_probs=212.2
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecC
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLE 384 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 384 (618)
.++|++.+.||+|+||.||+|...++..||+|+++......+.+.+|++++++++||||+++++++. .+..++||||++
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 90 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYME 90 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCC
Confidence 4678889999999999999999988889999999877777888999999999999999999999986 456899999999
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCc
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 464 (618)
+++|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.........
T Consensus 91 ~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 165 (279)
T 1qpc_A 91 NGSLVDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 165 (279)
T ss_dssp TCBHHHHTTSHHH--HTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE
T ss_pred CCCHHHHHhcCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccc
Confidence 9999999975432 3589999999999999999999999 9999999999999999999999999999876543221
Q ss_pred ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcc
Q 007088 465 LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAID 543 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 543 (618)
......++..|+|||.+.+..++.++||||||+++|||++ |+.||..... .+..........
T Consensus 166 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--------~~~~~~~~~~~~------ 228 (279)
T 1qpc_A 166 ---AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--------PEVIQNLERGYR------ 228 (279)
T ss_dssp ---CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHHHTTCC------
T ss_pred ---cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH--------HHHHHHHhcccC------
Confidence 1122336788999999988889999999999999999999 9999875322 111111111100
Q ss_pred ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 544 KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 544 ~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
..........+.+++.+|++.||++|||++++++.|+++....
T Consensus 229 ----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 229 ----MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ----CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 0011122346777888999999999999999999999987654
No 63
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=5.7e-43 Score=354.79 Aligned_cols=263 Identities=22% Similarity=0.365 Sum_probs=216.6
Q ss_pred hhccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
..++|++.+.||+|+||.||+|... ++..||+|++.......+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 90 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 90 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence 4567888999999999999999965 488999999988776778899999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++++|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 91 ~~~~~L~~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 165 (288)
T 3kfa_A 91 MTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165 (288)
T ss_dssp CTTEEHHHHHHHCCT--TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred CCCCcHHHHHHhccc--CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence 999999999975433 4589999999999999999999999 99999999999999999999999999998765433
Q ss_pred CcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchh
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETA 541 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 541 (618)
... .....+|+.|+|||.+.+..++.++||||||+++|+|++ |..||...... ........ .
T Consensus 166 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~-----~~~~~~~~---~------ 228 (288)
T 3kfa_A 166 YTA---HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYELLEK---D------ 228 (288)
T ss_dssp SEE---ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHHHHHHT---T------
T ss_pred ccc---ccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHhc---c------
Confidence 221 122336788999999988899999999999999999999 99998754321 11111111 1
Q ss_pred ccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCC
Q 007088 542 IDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHF 592 (618)
Q Consensus 542 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 592 (618)
............+.+++.+||+.||.+|||+.|+++.|+.+.++...
T Consensus 229 ----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~~ 275 (288)
T 3kfa_A 229 ----YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 275 (288)
T ss_dssp ----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred ----CCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhccc
Confidence 01111122335677788899999999999999999999998776443
No 64
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.5e-42 Score=372.60 Aligned_cols=254 Identities=24% Similarity=0.387 Sum_probs=207.8
Q ss_pred hhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCC-eeEEEEee
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK-ERLLVYSY 382 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lV~e~ 382 (618)
..++|+..+.||+|+||.||+|... ++.||||+++... ..+.|.+|+.++++++||||+++++++...+ ..++||||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 3467888999999999999999985 7799999998654 4567999999999999999999999987765 78999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++|+|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 269 ~~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 343 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 343 (450)
T ss_dssp CTTCBHHHHHHHHCT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred cCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc
Confidence 999999999976432 3479999999999999999999999 99999999999999999999999999998643221
Q ss_pred CcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchh
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETA 541 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 541 (618)
. ...++..|+|||.+.+..++.++|||||||++|||++ |+.||...... .....+. ...
T Consensus 344 ~-------~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~i~---~~~----- 403 (450)
T 1k9a_A 344 D-------TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPRVE---KGY----- 403 (450)
T ss_dssp ----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT-----THHHHHH---TTC-----
T ss_pred c-------CCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHH---cCC-----
Confidence 1 1236789999999999999999999999999999998 99999764432 1111111 110
Q ss_pred ccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 542 IDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 542 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
....+......+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 404 -----~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 404 -----KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp -----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred -----CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 1111222345677888899999999999999999999998653
No 65
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3.2e-42 Score=363.97 Aligned_cols=250 Identities=18% Similarity=0.234 Sum_probs=196.6
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCcc----CHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQH----SEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 378 (618)
.++|++.++||+|+||.||+|+. .+++.||+|++++... ..+.+.+|..++.++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 46799999999999999999995 4688999999976432 224578899999887 89999999999999999999
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++..
T Consensus 131 V~E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEcCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 999999999999987543 499999999999999999999999 9999999999999999999999999999863
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHH-HHHhcCCc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWI-TLLNTNSS 537 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~-~~~~~~~~ 537 (618)
...... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||......+.......... .......
T Consensus 204 ~~~~~~----~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~- 278 (396)
T 4dc2_A 204 LRPGDT----TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ- 278 (396)
T ss_dssp CCTTCC----BCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC-
T ss_pred ccCCCc----cccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc-
Confidence 322221 2234599999999999999999999999999999999999999975433221111111111 1111110
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCH
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTM 576 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 576 (618)
+ ..+......+.+++.+||+.||++||++
T Consensus 279 --------~--~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 279 --------I--RIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp --------C--CCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred --------c--CCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 0 0111123456677779999999999996
No 66
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.9e-42 Score=356.20 Aligned_cols=245 Identities=22% Similarity=0.329 Sum_probs=200.4
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC----ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS----QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
.++|.+.+.||+|+||.||+|.. .+++.||+|++... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35789999999999999999995 67899999998643 23345789999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+ +|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 88 ~E~~-~g~l~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK----RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp ECCC-CEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred EECC-CCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 9999 679998886543 499999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCcc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVA-TPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSL 538 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~ 538 (618)
.... ....+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||......+.....
T Consensus 160 ~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i-------------- 220 (336)
T 3h4j_B 160 DGNF-----LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV-------------- 220 (336)
T ss_dssp TSBT-----TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCC--------------
T ss_pred CCcc-----cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHH--------------
Confidence 4322 223458999999999988776 68999999999999999999999764432211110
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.... ...+......+.+++.+||+.||.+|||++|+++
T Consensus 221 ----~~~~-~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 221 ----NSCV-YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp ----CSSC-CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred ----HcCC-CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 0000 0011112345667777999999999999999975
No 67
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.6e-42 Score=350.55 Aligned_cols=257 Identities=21% Similarity=0.299 Sum_probs=196.7
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCC----CcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPG----GCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
.++|++.+.||+|+||.||+|.... +..||+|+++... ...+.+.+|+.++++++||||+++++++. .+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 4678889999999999999998632 5679999987533 33567899999999999999999999984 567899
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 93 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp EEECCTTEEHHHHHHHTT---TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred EEecCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccccc
Confidence 999999999999997543 3589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
....... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... ....... ....
T Consensus 167 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~-----~~~~~i~---~~~~ 235 (281)
T 1mp8_A 167 EDSTYYK---ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIE---NGER 235 (281)
T ss_dssp ---------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHHHH---TTCC
T ss_pred Ccccccc---cccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH-----HHHHHHH---cCCC
Confidence 5432211 112236789999999988889999999999999999997 99999764321 1111111 1110
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
..........+.+++.+||+.||++|||+.|+++.|+++.++
T Consensus 236 ----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 236 ----------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp ----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 001122334677788899999999999999999999998764
No 68
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.4e-42 Score=370.82 Aligned_cols=252 Identities=18% Similarity=0.221 Sum_probs=202.2
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
..++|++.+.||+|+||.||+|.. .+|+.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 456899999999999999999984 578999999997543 2345688999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeC---CCCceEEcccCccc
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLD---GDFEPKLSDFGLAR 456 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DfG~a~ 456 (618)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++ .++.+||+|||+++
T Consensus 89 ~E~~~gg~L~~~i~~~~----~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE----YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp ECCCBCCBHHHHHHHCS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEeCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 99999999999887653 499999999999999999999999 999999999999998 56789999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~ 536 (618)
........ .....||+.|+|||++.+..++.++||||+||++|+|++|+.||..... .+.........
T Consensus 162 ~~~~~~~~----~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~--------~~~~~~i~~~~ 229 (444)
T 3soa_A 162 EVEGEQQA----WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ--------HRLYQQIKAGA 229 (444)
T ss_dssp CCCTTCCB----CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHTC
T ss_pred EecCCCce----eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH--------HHHHHHHHhCC
Confidence 76543322 1234589999999999999999999999999999999999999975332 11111111110
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 537 SLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 537 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. . ............+.+++.+||+.||++|||+.|+++
T Consensus 230 ~--~-----~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 230 Y--D-----FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp C--C-----CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred C--C-----CCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0 0 001111122345667777999999999999999976
No 69
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-43 Score=370.60 Aligned_cols=264 Identities=20% Similarity=0.298 Sum_probs=208.7
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC------CCcEEEEEEeccC--ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP------GGCFIMIKRLEDS--QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 376 (618)
.++|.+.+.||+|+||.||+|... ++..||||+++.. .....++.+|+.++++++||||+++++++.+.+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 357888999999999999999943 4678999999753 23445688999999999999999999999999999
Q ss_pred EEEEeecCCCccccccCCCCC---CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC---ceEEc
Q 007088 377 LLVYSYLENGTLYDKLHPAEH---EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF---EPKLS 450 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~ 450 (618)
++||||+++|+|.+++..... ....+++..++.++.||+.||+|||++ +|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEEC
Confidence 999999999999999875432 224589999999999999999999999 999999999999999555 59999
Q ss_pred ccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHH
Q 007088 451 DFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWI 529 (618)
Q Consensus 451 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~ 529 (618)
|||+++.......... .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... .+..
T Consensus 227 DFG~a~~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--------~~~~ 296 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRK--GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--------QEVL 296 (367)
T ss_dssp CCHHHHHHHHHSSCTT--CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHHH
T ss_pred CCcccccccccccccc--CCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHH
Confidence 9999975432211111 111237889999999988899999999999999999998 9999975432 1112
Q ss_pred HHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcC
Q 007088 530 TLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYH 591 (618)
Q Consensus 530 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (618)
........ ..........+.+++.+||+.||++|||+.||++.|+.+.+...
T Consensus 297 ~~i~~~~~----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 297 EFVTSGGR----------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp HHHHTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred HHHHcCCC----------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 22111111 01111223457788889999999999999999999999877543
No 70
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.8e-42 Score=357.93 Aligned_cols=249 Identities=20% Similarity=0.287 Sum_probs=202.6
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc-------cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ-------HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 376 (618)
.++|.+.+.||+|+||.||+|.. .+|+.||+|+++... ...+.+.+|+.++++++||||+++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 35688999999999999999996 468999999986532 2467899999999999999999999999999999
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC----ceEEccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF----EPKLSDF 452 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Df 452 (618)
++||||+++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+||+++.++ .+||+||
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSS----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEEcCCCCCHHHHHHhcC----CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 99999999999999997543 489999999999999999999999 999999999999999887 7999999
Q ss_pred CcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHH
Q 007088 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLL 532 (618)
Q Consensus 453 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~ 532 (618)
|+++........ ....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.....
T Consensus 163 g~a~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~~ 229 (326)
T 2y0a_A 163 GLAHKIDFGNEF-----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--------QETLANV 229 (326)
T ss_dssp TTCEECCTTSCC-----CCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHHH
T ss_pred CCCeECCCCCcc-----ccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH--------HHHHHHH
Confidence 999876543221 233489999999999999999999999999999999999999975321 1111111
Q ss_pred hcC-CccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 533 NTN-SSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 533 ~~~-~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
... ..... .. .......+.+++.+||+.||++|||+.|+++
T Consensus 230 ~~~~~~~~~----~~----~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 230 SAVNYEFED----EY----FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHTCCCCCH----HH----HTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HhcCCCcCc----cc----cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111 00000 00 0112245667788999999999999999986
No 71
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=7.5e-44 Score=363.79 Aligned_cols=268 Identities=21% Similarity=0.329 Sum_probs=191.8
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhc--CCCCCccceeEEEEeCC----eeEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGS--VRHRNLVPLLGFCVAKK----ERLL 378 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~l 378 (618)
.++|.+.+.||+|+||.||+|+. +++.||||++... ....+.+|.+++.. ++||||+++++++...+ ..++
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T--THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc--chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 36899999999999999999987 4889999998753 34567788888887 79999999999998876 7899
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCceecCCCCCCeeeCCCCceEEc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH--------HNCNPRIIHRNISSKCILLDGDFEPKLS 450 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 450 (618)
||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||+||+++.++.+||+
T Consensus 79 v~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~ 150 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIA 150 (303)
T ss_dssp EEECCTTCCHHHHHHHC-----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BC
T ss_pred EEeccCCCCHHHHHhcc-----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEe
Confidence 99999999999999543 3788889999999999999999 77 99999999999999999999999
Q ss_pred ccCcccccCCCCCcccccccCCCCcccccCCCCCCCC------CCCCccchHHHHHHHHHHHhC----------CCCCCC
Q 007088 451 DFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL------VATPKGDVYSFGVVLLELITG----------ERPTHL 514 (618)
Q Consensus 451 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDVwS~Gvil~elltG----------~~Pf~~ 514 (618)
|||+++.................||+.|+|||++.+. .++.++|||||||++|||++| +.||..
T Consensus 151 DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~ 230 (303)
T 3gxj_A 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230 (303)
T ss_dssp CCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTT
T ss_pred ecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccc
Confidence 9999987654433222222334589999999998765 444689999999999999999 666654
Q ss_pred CCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 515 TNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 515 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
..........+...+ .. ........... ...+....+.+++.+||+.||++|||++|+++.|+++.++.
T Consensus 231 ~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 231 LVPSDPSVEEMRKVV---CE-QKLRPNIPNRW---QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp TCC-CCCCC-CHHHH---TT-SCCCCCCCGGG---GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred cCCCCccHHHHHHHH---HH-hhcCCCccccc---cchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 322211111111111 00 00000000000 01256678999999999999999999999999999987654
No 72
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.5e-42 Score=348.09 Aligned_cols=251 Identities=22% Similarity=0.343 Sum_probs=203.1
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK--KERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV~ 380 (618)
++|.+.+.||+|+||.||+|+.. ++.||+|+++... ...+.+.+|+.++++++||||+++++++.+. +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 57888999999999999999984 8899999997643 3345689999999999999999999999887 7789999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCC--ceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR--IIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
||+++|+|.+++..... ..+++..++.++.|++.||+|||+. + |+||||||+||+++.++.++|+|||++...
T Consensus 89 e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTN--FVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp ECCTTCBHHHHHHSCSS--CCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred cccCCCcHHHHHhhccc--CCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 99999999999976543 4689999999999999999999998 7 999999999999999999999999887643
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCC---ccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcC
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATP---KGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN 535 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~ 535 (618)
... ...||+.|+|||.+.+..++. ++||||||+++|||++|+.||..... ..........
T Consensus 164 ~~~---------~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--------~~~~~~~~~~ 226 (271)
T 3kmu_A 164 QSP---------GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN--------MEIGMKVALE 226 (271)
T ss_dssp SCT---------TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH--------HHHHHHHHHS
T ss_pred ccc---------CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh--------HHHHHHHHhc
Confidence 221 223789999999987765554 79999999999999999999975322 1111111111
Q ss_pred CccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhh
Q 007088 536 SSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAE 588 (618)
Q Consensus 536 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 588 (618)
.. .+ .........+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 227 ~~-----~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 227 GL-----RP----TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CC-----CC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CC-----CC----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 10 01 1112223457777889999999999999999999999865
No 73
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.7e-42 Score=348.14 Aligned_cols=264 Identities=22% Similarity=0.281 Sum_probs=207.2
Q ss_pred cCCCCcEEeecCCeeEEEEEeC-C---CcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCee-EEE
Q 007088 307 SFSKNNIIGTGRTGATYIAMLP-G---GCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER-LLV 379 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lV 379 (618)
.|...++||+|+||.||+|... + +..||+|++.... ...+.+.+|+.++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 4556689999999999999842 2 3479999997543 3346789999999999999999999999876655 999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+.+|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQ---RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp ECCCTTCBHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EecccCCCHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 99999999999997643 4589999999999999999999999 99999999999999999999999999998665
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
..............+|+.|+|||.+.+..++.++||||||+++|||++|..|+...... ..+........ .
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~----~~~~~~~~~~~---~-- 246 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP----FDLTHFLAQGR---R-- 246 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG----GGHHHHHHTTC---C--
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH----HHHHHHhhcCC---C--
Confidence 43322222223345789999999999999999999999999999999966665433221 11222111110 0
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCCC
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFT 593 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 593 (618)
..........+.+++.+||+.||.+|||++|+++.|+++.++....
T Consensus 247 --------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~ 292 (298)
T 3pls_A 247 --------LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292 (298)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred --------CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence 0011112345777888999999999999999999999998876533
No 74
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.7e-42 Score=351.73 Aligned_cols=261 Identities=21% Similarity=0.299 Sum_probs=198.6
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
++|++.+.||+|+||.||+|...+++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 5788999999999999999999889999999996533 2346788999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++ +|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE---GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CSE-EHHHHHHTST---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred cCC-CHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 985 9988886543 3589999999999999999999999 99999999999999999999999999998765322
Q ss_pred CcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC--ccc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS--SLE 539 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~--~~~ 539 (618)
... ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..+........... ...
T Consensus 155 ~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~ 226 (288)
T 1ob3_A 155 RKY----THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA----DQLMRIFRILGTPNSKNWP 226 (288)
T ss_dssp -----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCCCCTTTST
T ss_pred ccc----ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHHCCCChhhch
Confidence 211 22347999999998865 45899999999999999999999999754321 11111111110000 000
Q ss_pred -----hhcccccc-------CCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 540 -----TAIDKSLL-------GNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 540 -----~~~d~~l~-------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
...++... ..........+.+++.+||+.||++|||++|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 227 NVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00010000 0001112345677888999999999999999875
No 75
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3.8e-42 Score=359.25 Aligned_cols=254 Identities=19% Similarity=0.266 Sum_probs=202.6
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC------ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS------QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERL 377 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 377 (618)
.++|++.+.||+|+||.||+|.. .+++.||+|++... ....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 35799999999999999999995 56899999998532 224678999999999999999999999999999999
Q ss_pred EEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCc---eEEcccCc
Q 007088 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE---PKLSDFGL 454 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DfG~ 454 (618)
+||||+++|+|.+++.........+++..+..++.||+.||+|||++ +|+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 99999999999888765433334589999999999999999999999 9999999999999986654 99999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhc
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT 534 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~ 534 (618)
++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ........
T Consensus 180 a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---------~~~~~i~~ 246 (351)
T 3c0i_A 180 AIQLGESGLV----AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---------RLFEGIIK 246 (351)
T ss_dssp CEECCTTSCB----CCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH---------HHHHHHHH
T ss_pred eeEecCCCee----ecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH---------HHHHHHHc
Confidence 9876543221 1234589999999999999999999999999999999999999975211 11111111
Q ss_pred CCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 535 NSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 535 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.... ..+... ......+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~---~~~~~~----~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 247 GKYK---MNPRQW----SHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp TCCC---CCHHHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCC---CCcccc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1000 000000 012345677788999999999999999975
No 76
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.8e-42 Score=361.54 Aligned_cols=251 Identities=20% Similarity=0.263 Sum_probs=202.5
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCcc---CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQH---SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
..++|++.+.||+|+||.||+|.. .+++.||+|++..... ..+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 456899999999999999999995 4689999999975432 345688999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC---ceEEcccCccc
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF---EPKLSDFGLAR 456 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~DfG~a~ 456 (618)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++ .+||+|||++.
T Consensus 107 ~e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 107 FDLVTGGELFEDIVARE----FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp ECCCCSCBHHHHHTTCS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 99999999999987653 489999999999999999999999 999999999999998654 59999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~ 536 (618)
....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...........
T Consensus 180 ~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--------~~~~~~i~~~~ 246 (362)
T 2bdw_A 180 EVNDSEA-----WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--------HRLYAQIKAGA 246 (362)
T ss_dssp CCTTCCS-----CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTC
T ss_pred EecCCcc-----cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhCC
Confidence 7654322 1234589999999999999999999999999999999999999975321 11111111110
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 537 SLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 537 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.. ............+.+++.+||+.||++||++.|+++
T Consensus 247 ~~-------~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 247 YD-------YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp CC-------CCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CC-------CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00 000011122345677888999999999999999875
No 77
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.8e-42 Score=351.70 Aligned_cols=259 Identities=25% Similarity=0.395 Sum_probs=200.7
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
++|++.+.||+|+||.||+|... ++.||+|++... ...+.+.+|++++++++||||+++++++. +..++||||+++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~ 83 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEG 83 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCC
Confidence 56888999999999999999974 788999999654 34567899999999999999999999876 347999999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCc-eEEcccCcccccCCCCCc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE-PKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-~kl~DfG~a~~~~~~~~~ 464 (618)
|+|.+++..... ...+++..++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++.......
T Consensus 84 ~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~-- 160 (307)
T 2eva_A 84 GSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM-- 160 (307)
T ss_dssp CBHHHHHHCSSS-EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCHHHHHhccCC-CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc--
Confidence 999999976542 235789999999999999999999932128999999999999998886 7999999997654321
Q ss_pred ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccc
Q 007088 465 LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDK 544 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 544 (618)
....||+.|+|||++.+..++.++||||||+++|||++|+.||...... ............. +
T Consensus 161 -----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~~~------~ 223 (307)
T 2eva_A 161 -----TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP------AFRIMWAVHNGTR------P 223 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS------HHHHHHHHHTTCC------C
T ss_pred -----ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc------HHHHHHHHhcCCC------C
Confidence 1223899999999999999999999999999999999999999754321 1111111111100 0
Q ss_pred cccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCC
Q 007088 545 SLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHF 592 (618)
Q Consensus 545 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 592 (618)
.. .......+.+++.+||+.||++|||++|+++.|+.+.+.+..
T Consensus 224 ~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 267 (307)
T 2eva_A 224 PL----IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 267 (307)
T ss_dssp CC----BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred Cc----ccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccC
Confidence 01 111234567788899999999999999999999999877654
No 78
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.1e-42 Score=354.86 Aligned_cols=264 Identities=24% Similarity=0.341 Sum_probs=211.8
Q ss_pred hccCCCCcEEeecCCeeEEEEEe------CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCe
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML------PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKE 375 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 375 (618)
.++|+..+.||+|+||.||+|+. .+++.||+|+++... ...+.+.+|+.+++++ +||||+++++++.+.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 46788899999999999999984 357899999997643 2346789999999999 99999999999999999
Q ss_pred eEEEEeecCCCccccccCCCCC--------------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee
Q 007088 376 RLLVYSYLENGTLYDKLHPAEH--------------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL 441 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~--------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 441 (618)
.++||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEE
Confidence 9999999999999999875432 123589999999999999999999999 99999999999999
Q ss_pred CCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCc
Q 007088 442 DGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPES 520 (618)
Q Consensus 442 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~ 520 (618)
+.++.+||+|||+++......... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.......
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~- 255 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYV--VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS- 255 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSE--ECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-
T ss_pred cCCCCEEEccccccccccccccce--eccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-
Confidence 999999999999998765433211 1122336789999999988899999999999999999999 999997643211
Q ss_pred cccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 521 FKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 521 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
........ . ............+.+++.+||+.||.+|||+.|+++.|+++.++.
T Consensus 256 ---~~~~~~~~---~----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 256 ---KFYKMIKE---G----------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp ---HHHHHHHH---T----------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred ---HHHHHhcc---C----------CCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 11111111 0 000111122346777888999999999999999999999987754
No 79
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=6.4e-42 Score=348.95 Aligned_cols=264 Identities=25% Similarity=0.364 Sum_probs=205.1
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCC----CcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEe-CCeeE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPG----GCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVA-KKERL 377 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~ 377 (618)
..+|...+.||+|+||.||+|...+ ...||+|.+.... ...+.+.+|+.++++++||||+++++++.. ++..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3467888999999999999998532 2468999987533 334678999999999999999999999654 55789
Q ss_pred EEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccc
Q 007088 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARL 457 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 457 (618)
+||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARD 177 (298)
T ss_dssp EEEECCTTCBHHHHHHCTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred EEEeCCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccc
Confidence 9999999999999996543 4589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCC
Q 007088 458 MNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNS 536 (618)
Q Consensus 458 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~ 536 (618)
................+|+.|+|||.+.+..++.++||||||+++|||++ |.+||...... ....... ...
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~-----~~~~~~~---~~~ 249 (298)
T 3f66_A 178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-----DITVYLL---QGR 249 (298)
T ss_dssp CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT-----THHHHHH---TTC
T ss_pred ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH-----HHHHHHh---cCC
Confidence 65433222222334457889999999988899999999999999999999 55555443221 1111111 110
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCC
Q 007088 537 SLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHF 592 (618)
Q Consensus 537 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 592 (618)
. ... .......+.+++.+||+.||++|||++|+++.|+++...+..
T Consensus 250 ~-------~~~---~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 295 (298)
T 3f66_A 250 R-------LLQ---PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295 (298)
T ss_dssp C-------CCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred C-------CCC---CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 0 000 111234577788899999999999999999999999887653
No 80
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=8.5e-42 Score=347.33 Aligned_cols=280 Identities=18% Similarity=0.202 Sum_probs=215.6
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEE-EeCCeeEEEEe
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFC-VAKKERLLVYS 381 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lV~e 381 (618)
..++|++.+.||+|+||.||+|+. .+++.||+|++..... .+.+.+|++++++++|++++..+.++ ...+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 457899999999999999999995 6789999998755332 23578899999999988877777665 56677899999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee---CCCCceEEcccCccccc
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL---DGDFEPKLSDFGLARLM 458 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfG~a~~~ 458 (618)
|+ +++|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+++..
T Consensus 86 ~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~ 158 (296)
T 4hgt_A 86 LL-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp CC-CCBHHHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred cc-CCCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence 99 889999987433 3599999999999999999999999 99999999999999 78899999999999876
Q ss_pred CCCCCccc---ccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcC
Q 007088 459 NPVDTHLS---TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN 535 (618)
Q Consensus 459 ~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~ 535 (618)
........ .......||+.|+|||.+.+..++.++|||||||++|||++|+.||......... ..+..........
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~ 237 (296)
T 4hgt_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-QKYERISEKKMST 237 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS-SHHHHHHHHHHHS
T ss_pred cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh-hhhhhhhcccccc
Confidence 54332111 1122345899999999999999999999999999999999999999865443221 1111111111100
Q ss_pred CccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCCCCCCcccCCC
Q 007088 536 SSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTTDDEIMLPS 602 (618)
Q Consensus 536 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~~~~ 602 (618)
... . + .. .....+.+++.+||+.||++|||++|+++.|+++.++.+.+.+..++|..
T Consensus 238 -~~~-~----~-~~---~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~~~~~dw~~ 294 (296)
T 4hgt_A 238 -PIE-V----L-CK---GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 294 (296)
T ss_dssp -CHH-H----H-TT---TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCTTCCCGGGG
T ss_pred -hhh-h----h-hc---cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCccCccchhh
Confidence 000 0 0 00 11346777888999999999999999999999999999998888888754
No 81
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-42 Score=362.08 Aligned_cols=263 Identities=25% Similarity=0.369 Sum_probs=197.4
Q ss_pred cCCCCcEEeecCCeeEEEEEeC--C--CcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEe-CCeeEEE
Q 007088 307 SFSKNNIIGTGRTGATYIAMLP--G--GCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVA-KKERLLV 379 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~--~--~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lV 379 (618)
.|...+.||+|+||.||+|... + +..||+|.++... ...+++.+|+.++++++||||+++++++.. .+..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4667789999999999999853 3 2468999987533 345679999999999999999999999755 4578999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++|+|.+++.... ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 170 ~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EECCTTCBHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EECCCCCCHHHHHhhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccc
Confidence 99999999999997543 3588999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCcc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSL 538 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~ 538 (618)
..............+|+.|+|||.+.+..++.++|||||||++|||++ |.+||...... ....... .....
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~-----~~~~~~~---~~~~~ 315 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-----DITVYLL---QGRRL 315 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS-----CHHHHHH---TTCCC
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH-----HHHHHHH---cCCCC
Confidence 432222112223347789999999988899999999999999999999 67777654322 1222111 11000
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCCC
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFT 593 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 593 (618)
..+......+.+++.+||+.||++|||++|+++.|+++...+...
T Consensus 316 ----------~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 316 ----------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp ----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred ----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 001122346777888999999999999999999999998877643
No 82
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.5e-41 Score=353.18 Aligned_cols=278 Identities=22% Similarity=0.320 Sum_probs=216.5
Q ss_pred cCHHHHHHhhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhc--CCCCCccceeEEEEeC
Q 007088 296 MRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGS--VRHRNLVPLLGFCVAK 373 (618)
Q Consensus 296 ~~~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~ 373 (618)
.++.--....++|.+.+.||+|+||.||+|+. +++.||+|++... ..+.+.+|.+++.. ++||||+++++++...
T Consensus 32 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 32 LPLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp SCHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred CceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 34444455678899999999999999999998 5899999999653 35667888888877 7899999999999887
Q ss_pred C----eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCceecCCCCCCeee
Q 007088 374 K----ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH--------HNCNPRIIHRNISSKCILL 441 (618)
Q Consensus 374 ~----~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlkp~NIll 441 (618)
+ ..++||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||+||++
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll 180 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILV 180 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEE
T ss_pred CCccceeEEEEeecCCCcHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEE
Confidence 6 789999999999999999643 4899999999999999999999 77 99999999999999
Q ss_pred CCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCC------CCCCccchHHHHHHHHHHHhC-------
Q 007088 442 DGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL------VATPKGDVYSFGVVLLELITG------- 508 (618)
Q Consensus 442 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDVwS~Gvil~elltG------- 508 (618)
+.++.+||+|||++..................||+.|+|||++.+. .++.++||||||+++|||++|
T Consensus 181 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~ 260 (342)
T 1b6c_B 181 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 260 (342)
T ss_dssp CTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred CCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcc
Confidence 9999999999999987654433222222344589999999998765 234689999999999999999
Q ss_pred ---CCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 007088 509 ---ERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRA 585 (618)
Q Consensus 509 ---~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 585 (618)
+.||....... .....+........ ....+.... ...+....+.+++.+||+.||++|||+.|+++.|++
T Consensus 261 ~~~~~p~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 333 (342)
T 1b6c_B 261 EDYQLPYYDLVPSD---PSVEEMRKVVCEQK-LRPNIPNRW---QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 333 (342)
T ss_dssp CCCCCTTTTTSCSS---CCHHHHHHHHTTSC-CCCCCCGGG---GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred cccccCccccCcCc---ccHHHHHHHHHHHH-hCCCCcccc---cchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 67776543221 12233332222111 110011110 123566788899999999999999999999999999
Q ss_pred hhhhcC
Q 007088 586 IAERYH 591 (618)
Q Consensus 586 i~~~~~ 591 (618)
+.++..
T Consensus 334 i~~~~~ 339 (342)
T 1b6c_B 334 LSQQEG 339 (342)
T ss_dssp HHHTTC
T ss_pred HHHHhc
Confidence 988654
No 83
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.5e-41 Score=345.55 Aligned_cols=279 Identities=18% Similarity=0.197 Sum_probs=218.8
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEE-EeCCeeEEEEee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFC-VAKKERLLVYSY 382 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lV~e~ 382 (618)
.++|++.+.||+|+||.||+|+. .+++.||+|++.... ..+++.+|+.++++++|++++..+.++ ...+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence 46799999999999999999995 679999999986543 234688999999999988877766665 556678999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee---CCCCceEEcccCcccccC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL---DGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfG~a~~~~ 459 (618)
+ +++|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+++...
T Consensus 87 ~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 159 (296)
T 3uzp_A 87 L-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp C-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred c-CCCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence 9 889999986433 3599999999999999999999999 99999999999999 488899999999998765
Q ss_pred CCCCccc---ccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC
Q 007088 460 PVDTHLS---TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536 (618)
Q Consensus 460 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~ 536 (618)
....... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||......... ..+...........
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~ 238 (296)
T 3uzp_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-QKYERISEKKMSTP 238 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS-SHHHHHHHHHHHSC
T ss_pred ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhh-hhhhhhcccccCCc
Confidence 4332111 1112345899999999999999999999999999999999999999865432211 11111111111000
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCCCCCCcccCCC
Q 007088 537 SLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTTDDEIMLPS 602 (618)
Q Consensus 537 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~~~~ 602 (618)
. . .+. ......+.+++.+||+.||++|||++|+++.|+++.++.....++.++|..
T Consensus 239 -~-~----~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~~~~dw~~ 294 (296)
T 3uzp_A 239 -I-E----VLC----KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNM 294 (296)
T ss_dssp -H-H----HHT----TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCSSCCCGGGG
T ss_pred -h-H----HHH----hhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCcccccccccc
Confidence 0 0 000 112245777888999999999999999999999999999998888888865
No 84
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=4.3e-42 Score=349.30 Aligned_cols=262 Identities=23% Similarity=0.273 Sum_probs=198.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
++|++.+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 5788999999999999999996 468999999996533 234678899999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+++ ++.+.+.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~~-~l~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCN---GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp CCSE-EHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred cCCC-CHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9986 5655554332 3599999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCcccccccCCCCcccccCCCCCCCCC-CCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcC--Ccc
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLV-ATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN--SSL 538 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~--~~~ 538 (618)
.... ....||+.|+|||++.+.. ++.++|||||||++|||++|..||...... ...+.......... ...
T Consensus 155 ~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~---~~~~~~i~~~~~~~~~~~~ 227 (292)
T 3o0g_A 155 VRCY----SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV---DDQLKRIFRLLGTPTEEQW 227 (292)
T ss_dssp CSCC----CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH---HHHHHHHHHHHCCCCTTTC
T ss_pred cccc----cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCH---HHHHHHHHHHhCCCChhhh
Confidence 2221 2334899999999987765 799999999999999999998887543321 11111111111100 000
Q ss_pred ---chhcc---------ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 539 ---ETAID---------KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 539 ---~~~~d---------~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
....+ ..............+.+++.+||+.||++|||++|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 228 PSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00000 00000011123345667778999999999999999975
No 85
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.3e-42 Score=360.27 Aligned_cols=278 Identities=22% Similarity=0.308 Sum_probs=204.4
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHH--HhcCCCCCccceeEEEEe-----CCeeE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINT--LGSVRHRNLVPLLGFCVA-----KKERL 377 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~-----~~~~~ 377 (618)
.++|++.+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++.+.. ....+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 88 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL 88 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence 46788999999999999999987 68999999997543 3344444444 556899999999986643 22568
Q ss_pred EEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC------CCCceecCCCCCCeeeCCCCceEEcc
Q 007088 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC------NPRIIHRNISSKCILLDGDFEPKLSD 451 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~~~ivH~Dlkp~NIll~~~~~~kl~D 451 (618)
+||||+++|+|.+++.... .++..+..++.||+.||+|||+.+ .++|+||||||+|||++.++.+||+|
T Consensus 89 lv~e~~~~g~L~~~l~~~~-----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~D 163 (336)
T 3g2f_A 89 LVMEYYPNGSLXKYLSLHT-----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISD 163 (336)
T ss_dssp EEECCCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECC
T ss_pred EEEecCCCCcHHHHHhhcc-----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEee
Confidence 9999999999999996543 588999999999999999999873 33899999999999999999999999
Q ss_pred cCcccccCCCCCcc----cccccCCCCcccccCCCCCCC-------CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCc
Q 007088 452 FGLARLMNPVDTHL----STFVNGEFGDLGYVAPEYPRT-------LVATPKGDVYSFGVVLLELITGERPTHLTNAPES 520 (618)
Q Consensus 452 fG~a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~ 520 (618)
||+++......... ........||+.|+|||++.+ ..++.++|||||||++|||++|..||........
T Consensus 164 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~ 243 (336)
T 3g2f_A 164 FGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE 243 (336)
T ss_dssp CTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCC
T ss_pred ccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhH
Confidence 99998765432111 111223458999999999876 4567899999999999999999888765443322
Q ss_pred cccCHHH---------HHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcC
Q 007088 521 FKGSLVE---------WITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYH 591 (618)
Q Consensus 521 ~~~~l~~---------~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (618)
....... ..............+.... .........+.+++.+||+.||++|||++|+++.|+++.+.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~ 321 (336)
T 3g2f_A 244 YQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAW--KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321 (336)
T ss_dssp CCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTC--CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred HHHhhhcccCCCchHHHHHhhhcccccCCCCCccc--ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence 2221111 0111111111111111111 1123466678999999999999999999999999999998775
Q ss_pred C
Q 007088 592 F 592 (618)
Q Consensus 592 ~ 592 (618)
.
T Consensus 322 ~ 322 (336)
T 3g2f_A 322 R 322 (336)
T ss_dssp C
T ss_pred h
Confidence 3
No 86
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.2e-41 Score=348.81 Aligned_cols=263 Identities=26% Similarity=0.410 Sum_probs=202.2
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
.++|.+.++||+|+||.||+|...+ .+++|+++... ...+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 4678999999999999999998643 58888886533 33467899999999999999999999875 456899999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 112 ~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQE---TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp CCSSCBHHHHHHTSC---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred cCCCCcHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 999999999986543 4599999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCcccccccCCCCcccccCCCCCC---CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCcc
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPR---TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSL 538 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~ 538 (618)
... .......||+.|+|||++. +..++.++|||||||++|||++|+.||......+ .+..........
T Consensus 186 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~----~~~~~~~~~~~~--- 256 (307)
T 3lb7_A 186 SGS--QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD----QIIFMVGRGYAS--- 256 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH----HHHHHHHHTCCC---
T ss_pred ccc--ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH----HHHHHHhcCCCC---
Confidence 111 1122335899999999875 6678899999999999999999999997543211 111111110000
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcC
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYH 591 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (618)
+.+ ..........+.+++.+||+.||++||++.|+++.|+.+.+...
T Consensus 257 -----~~~-~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 257 -----PDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp -----CCS-TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred -----cch-hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 000 01111233567778889999999999999999999999987653
No 87
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=8.2e-43 Score=363.97 Aligned_cols=247 Identities=19% Similarity=0.262 Sum_probs=197.8
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC----ccCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS----QHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 378 (618)
.++|++.+.||+|+||.||+|+. .+++.||+|+++.. ....+.+.+|..++..+ +||||+++++++.+.+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 46899999999999999999995 46899999999753 23456688999999988 79999999999999999999
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++..
T Consensus 102 v~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSR----RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 999999999999987543 499999999999999999999999 9999999999999999999999999999864
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCcc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSL 538 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~ 538 (618)
...... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||...+. .+..........
T Consensus 175 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--------~~~~~~i~~~~~- 241 (353)
T 3txo_A 175 ICNGVT----TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE--------DDLFEAILNDEV- 241 (353)
T ss_dssp CC-------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCC-
T ss_pred ccCCcc----ccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCCC-
Confidence 332221 1234589999999999888899999999999999999999999975432 111111111110
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCH------HHHHH
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTM------FEVYQ 581 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~ 581 (618)
..+......+.+++.+||+.||.+||++ +|+++
T Consensus 242 ----------~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 242 ----------VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp ----------CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ----------CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 0011122356677779999999999998 66653
No 88
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3.3e-42 Score=360.99 Aligned_cols=253 Identities=20% Similarity=0.253 Sum_probs=195.3
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
.++|++.+.||+|+||.||+++.. +++.||+|++.......+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 98 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA 98 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence 467999999999999999999964 7899999999876666678999999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCc--eEEcccCcccccCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE--PKLSDFGLARLMNPV 461 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~DfG~a~~~~~~ 461 (618)
++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+++.....
T Consensus 99 ~~~~L~~~l~~~~----~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~ 171 (361)
T 3uc3_A 99 SGGELYERICNAG----RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 171 (361)
T ss_dssp CSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC------
T ss_pred CCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccccc
Confidence 9999999986543 499999999999999999999999 9999999999999987765 999999999754322
Q ss_pred CCcccccccCCCCcccccCCCCCCCCCCCCc-cchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPK-GDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
.. .....||+.|+|||++.+..++.+ +|||||||++|||++|+.||....... ..............
T Consensus 172 ~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~----~~~~~~~~~~~~~~--- 239 (361)
T 3uc3_A 172 SQ-----PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR----DYRKTIQRILSVKY--- 239 (361)
T ss_dssp --------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC----CHHHHHHHHHTTCC---
T ss_pred CC-----CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH----HHHHHHHHHhcCCC---
Confidence 11 122348999999999887777655 899999999999999999998654322 22222222211110
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
...........+.+++.+||+.||++|||+.|+++.
T Consensus 240 ------~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 240 ------SIPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ------CCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ------CCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 000000122456677779999999999999999763
No 89
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.3e-42 Score=358.92 Aligned_cols=257 Identities=25% Similarity=0.375 Sum_probs=201.8
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCc----EEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGC----FIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
++|++.+.||+|+||.||+|.. .+++ +||+|.+.... ...+.+.+|+.++++++||||+++++++. .+..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 4688899999999999999995 3444 48888875432 23346778999999999999999999986 456889
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 92 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHR---GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEECCTTCBSHHHHHSSG---GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred EEEeCCCCCHHHHHHHcc---ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccccc
Confidence 999999999999987653 3588999999999999999999999 9999999999999999999999999999887
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
........ .....+|..|+|||++.+..++.++||||||+++|||++ |+.||...... .+..... ....
T Consensus 166 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~---~~~~ 235 (325)
T 3kex_A 166 PPDDKQLL--YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA-----EVPDLLE---KGER 235 (325)
T ss_dssp CCCTTCCC-------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT-----HHHHHHH---TTCB
T ss_pred Cccccccc--ccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH-----HHHHHHH---cCCC
Confidence 54332211 122347889999999998899999999999999999999 99999764321 1111111 1100
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
. .........+.+++.+||+.||.+||+++|+++.|+.+...
T Consensus 236 ~----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 236 L----------AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp C----------CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred C----------CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0 00111223466788899999999999999999999998653
No 90
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-42 Score=359.46 Aligned_cols=265 Identities=20% Similarity=0.307 Sum_probs=207.9
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe------CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCC
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML------PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKK 374 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 374 (618)
..++|.+.+.||+|+||.||+|.. .++..||+|+++... ...+.+.+|+.++.++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 457899999999999999999995 246789999997532 3446789999999999 8999999999999999
Q ss_pred eeEEEEeecCCCccccccCCCCCC-------------------CcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCC
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEHE-------------------VMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNIS 435 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 435 (618)
..++||||+++|+|.+++...... ...+++..++.++.||+.||+|||+. +|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence 999999999999999999765321 13489999999999999999999999 99999999
Q ss_pred CCCeeeCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCC
Q 007088 436 SKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHL 514 (618)
Q Consensus 436 p~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~ 514 (618)
|+||+++.++.+||+|||++.......... ......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||..
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 277 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYV--VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSE--EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccce--eccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCccc
Confidence 999999999999999999998664332211 1122336789999999988889999999999999999998 9999976
Q ss_pred CCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 515 TNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 515 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
..... ....... .. ............+.+++.+||+.||.+|||+.|+++.|+.+.+..
T Consensus 278 ~~~~~----~~~~~~~---~~----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 278 IPVDA----NFYKLIQ---NG----------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp CCCSH----HHHHHHH---TT----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred CCcHH----HHHHHHh---cC----------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 44321 1111111 11 001111122346777888999999999999999999999986654
No 91
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=9.1e-42 Score=355.18 Aligned_cols=249 Identities=18% Similarity=0.231 Sum_probs=196.3
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 379 (618)
++|+..+.||+|+||.||+|+. .+++.||+|+++... ...+.+.+|..++.++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 5688899999999999999996 468999999997543 2345578899999988 899999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++...
T Consensus 89 ~e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp ECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 99999999999986543 489999999999999999999999 99999999999999999999999999998643
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcccc-CHHHHHHHHhcCCcc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKG-SLVEWITLLNTNSSL 538 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~-~l~~~~~~~~~~~~~ 538 (618)
..... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||........... ............. .
T Consensus 162 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~-~ 236 (345)
T 3a8x_A 162 RPGDT----TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-I 236 (345)
T ss_dssp CTTCC----BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC-C
T ss_pred CCCCc----ccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC-C
Confidence 32221 2234589999999999999999999999999999999999999975432211111 1111111111110 0
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCH
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTM 576 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 576 (618)
.+ +......+.+++.+||+.||++||++
T Consensus 237 ------~~----p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 237 ------RI----PRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ------CC----CTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred ------CC----CCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 01 11123456677779999999999996
No 92
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-42 Score=359.84 Aligned_cols=281 Identities=17% Similarity=0.184 Sum_probs=217.9
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC---------CCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccc----------
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP---------GGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVP---------- 365 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~---------~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------- 365 (618)
.++|.+.+.||+|+||.||+|... +++.||+|++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 367999999999999999999965 3789999998754 36789999999999999887
Q ss_pred -----eeEEEEe-CCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCe
Q 007088 366 -----LLGFCVA-KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCI 439 (618)
Q Consensus 366 -----l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 439 (618)
+++++.. .+..++||||+ +++|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+||
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NI 190 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPK--HVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENI 190 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGG--GCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHE
Confidence 6778776 67889999999 9999999976522 4599999999999999999999999 999999999999
Q ss_pred eeCCCC--ceEEcccCcccccCCCCCccc---ccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 007088 440 LLDGDF--EPKLSDFGLARLMNPVDTHLS---TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHL 514 (618)
Q Consensus 440 ll~~~~--~~kl~DfG~a~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~ 514 (618)
+++.++ .+||+|||+++.......... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 191 l~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 270 (352)
T 2jii_A 191 FVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTN 270 (352)
T ss_dssp EEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred EEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 999998 899999999987654322111 111233589999999999999999999999999999999999999976
Q ss_pred CCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCCCC
Q 007088 515 TNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTT 594 (618)
Q Consensus 515 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 594 (618)
..... ..+........... ....+...... .....+.+++.+||+.||++|||++|+++.|+++.++.....
T Consensus 271 ~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~ 342 (352)
T 2jii_A 271 CLPNT---EDIMKQKQKFVDKP--GPFVGPCGHWI---RPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVSP 342 (352)
T ss_dssp GTTCH---HHHHHHHHHHHHSC--CCEECTTSCEE---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCT
T ss_pred CCcCH---HHHHHHHHhccCCh--hhhhhhccccC---CCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCCc
Confidence 43211 11222221111111 11111110001 123456777779999999999999999999999999999999
Q ss_pred CCcccCCCC
Q 007088 595 DDEIMLPSN 603 (618)
Q Consensus 595 ~~~~~~~~~ 603 (618)
++.++|+..
T Consensus 343 ~~~~dw~~~ 351 (352)
T 2jii_A 343 YDPIGLPMV 351 (352)
T ss_dssp TSCCCCCC-
T ss_pred CccccCcCC
Confidence 999988754
No 93
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=6.8e-42 Score=346.79 Aligned_cols=252 Identities=25% Similarity=0.408 Sum_probs=200.1
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCcc--C------HHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQH--S------EKEFLSEINTLGSVRHRNLVPLLGFCVAKKE 375 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 375 (618)
.++|+..+.||+|+||.||+|.. .+++.||+|++..... . .+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 36788899999999999999996 5789999999864321 1 167899999999999999999999986654
Q ss_pred eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCC--ceecCCCCCCeeeCCCCc-----eE
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR--IIHRNISSKCILLDGDFE-----PK 448 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~-----~k 448 (618)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ + |+||||||+||+++.++. +|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~k 169 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKA---HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAK 169 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred -eEEEEecCCCCHHHHHhccc---CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEE
Confidence 79999999999998886544 4599999999999999999999999 8 999999999999988776 99
Q ss_pred EcccCcccccCCCCCcccccccCCCCcccccCCCCC--CCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHH
Q 007088 449 LSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYP--RTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLV 526 (618)
Q Consensus 449 l~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~ 526 (618)
|+|||+++..... .....||+.|+|||.+ ....++.++||||||+++|||++|+.||....... .
T Consensus 170 l~Dfg~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~------~ 236 (287)
T 4f0f_A 170 VADFGLSQQSVHS-------VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK------I 236 (287)
T ss_dssp ECCCTTCBCCSSC-------EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH------H
T ss_pred eCCCCcccccccc-------ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH------H
Confidence 9999999754331 1223489999999998 45567899999999999999999999997543221 1
Q ss_pred HHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 007088 527 EWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAI 586 (618)
Q Consensus 527 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 586 (618)
........... ...........+.+++.+||+.||++|||++|+++.|+++
T Consensus 237 ~~~~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 237 KFINMIREEGL---------RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHHHHHHHSCC---------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred HHHHHHhccCC---------CCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 11111111111 1111122335677788899999999999999999999864
No 94
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.1e-41 Score=361.05 Aligned_cols=273 Identities=19% Similarity=0.231 Sum_probs=203.4
Q ss_pred hccCCCCcEEeec--CCeeEEEEEeC-CCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 305 TNSFSKNNIIGTG--RTGATYIAMLP-GGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 305 ~~~y~~~~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
.++|++.++||+| +||.||+|+.. +++.||||+++... ...+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4679999999999 99999999964 78999999997543 234567889999999999999999999999999999
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
||||+++|+|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||.+...
T Consensus 104 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFM--DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEECCTTCBHHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEccCCCCHHHHHhhhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 9999999999999876532 3489999999999999999999999 9999999999999999999999999988654
Q ss_pred CCCCCc---ccccccCCCCcccccCCCCCCC--CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHh
Q 007088 459 NPVDTH---LSTFVNGEFGDLGYVAPEYPRT--LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLN 533 (618)
Q Consensus 459 ~~~~~~---~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~ 533 (618)
...... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+.....+........
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL 258 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccc
Confidence 321111 1111122358999999999887 67899999999999999999999999765443222111111000000
Q ss_pred cCC------------------ccchhcc---cc------ccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 534 TNS------------------SLETAID---KS------LLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 534 ~~~------------------~~~~~~d---~~------l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
... .....+. +. ............+.+++.+||+.||++|||++|+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000 0000000 00 0000111223567788889999999999999999853
No 95
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.9e-41 Score=355.37 Aligned_cols=247 Identities=22% Similarity=0.303 Sum_probs=200.6
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC----ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS----QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|++.+.||+|+||.||++.. .+++.||+|++... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 5789999999999999999995 46899999999653 244577899999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 95 e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV----HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp CCCTTEEHHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 9999999999997643 499999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCCcccccCCCCCCC---CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRT---LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .............
T Consensus 168 ~~~-----~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~-----~~~~~~~~~~~~~- 236 (384)
T 4fr4_A 168 ETQ-----ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST-----SSKEIVHTFETTV- 236 (384)
T ss_dssp TCC-----BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS-----CHHHHHHHHHHCC-
T ss_pred CCc-----eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc-----cHHHHHHHHhhcc-
Confidence 322 223459999999999864 45899999999999999999999999754332 1122221111110
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCC-HHHHH
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHT-MFEVY 580 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl 580 (618)
...+......+.+++.+||+.||.+||+ ++++.
T Consensus 237 ----------~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~ 270 (384)
T 4fr4_A 237 ----------VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQ 270 (384)
T ss_dssp ----------CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred ----------cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence 0011122345677777999999999998 66664
No 96
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=5.4e-42 Score=355.64 Aligned_cols=264 Identities=23% Similarity=0.365 Sum_probs=210.5
Q ss_pred hccCCCCcEEeecCCeeEEEEEe--------CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcC-CCCCccceeEEEEeC
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML--------PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAK 373 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 373 (618)
.++|.+.+.||+|+||.||+|.. .++..||+|+++... ...+.+.+|+++++++ +||||+++++++.+.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 46899999999999999999985 346789999997643 3346788999999999 899999999999999
Q ss_pred CeeEEEEeecCCCccccccCCCCCC------------CcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee
Q 007088 374 KERLLVYSYLENGTLYDKLHPAEHE------------VMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL 441 (618)
Q Consensus 374 ~~~~lV~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 441 (618)
+..++||||+++|+|.+++...... ...+++..++.++.||+.||+|||+. +|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 9999999999999999999765421 23489999999999999999999999 99999999999999
Q ss_pred CCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCc
Q 007088 442 DGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPES 520 (618)
Q Consensus 442 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~ 520 (618)
+.++.+||+|||+++.......... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--- 265 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKK--TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--- 265 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEEC--CSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH---
T ss_pred cCCCCEEEccccccccccccccccc--cCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH---
Confidence 9999999999999987654332111 122346789999999988889999999999999999999 9999975321
Q ss_pred cccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcC
Q 007088 521 FKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYH 591 (618)
Q Consensus 521 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (618)
.+.......... ..........+.+++.+||+.||.+|||+.|+++.|+++.....
T Consensus 266 -----~~~~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 266 -----EELFKLLKEGHR----------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp -----HHHHHHHHHTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred -----HHHHHHHhcCCC----------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 111111111110 01111223467778889999999999999999999999987654
No 97
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=7e-42 Score=356.88 Aligned_cols=251 Identities=22% Similarity=0.291 Sum_probs=188.7
Q ss_pred hhccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
..++|++.+.||+|+||.||+|+.. +++.||+|+++... ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 3567999999999999999999965 57899999997643 345688999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC---CCceEEcccCcccccC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG---DFEPKLSDFGLARLMN 459 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfG~a~~~~ 459 (618)
+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++...
T Consensus 130 ~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~ 202 (349)
T 2w4o_A 130 VTGGELFDRIVEKG----YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE 202 (349)
T ss_dssp CCSCBHHHHHTTCS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC------
T ss_pred CCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccC
Confidence 99999999997653 489999999999999999999999 9999999999999975 8899999999998764
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ............
T Consensus 203 ~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~~i~~~~~-- 268 (349)
T 2w4o_A 203 HQVL-----MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD-------QFMFRRILNCEY-- 268 (349)
T ss_dssp ---------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH-------HHHHHHHHTTCC--
T ss_pred cccc-----cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc-------HHHHHHHHhCCC--
Confidence 3221 12234899999999999999999999999999999999999999754321 111111111110
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. ............+.+++.+||+.||++|||+.|+++
T Consensus 269 ~-----~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 269 Y-----FISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp C-----CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred c-----cCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 000111223346677888999999999999999976
No 98
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.7e-42 Score=346.20 Aligned_cols=261 Identities=19% Similarity=0.305 Sum_probs=208.8
Q ss_pred ccCCCCc-EEeecCCeeEEEEEeC---CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 306 NSFSKNN-IIGTGRTGATYIAMLP---GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 306 ~~y~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
++|.+.+ .||+|+||.||+|... ++..||+|+++... ...+.+.+|++++++++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 4555565 8999999999999853 67889999997643 3456789999999999999999999999 55678999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++++|.+++.... ..+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EECCTTEEHHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EEeCCCCCHHHHHHhCC---ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 99999999999997543 4589999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCcc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSL 538 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~ 538 (618)
....... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... +..........
T Consensus 162 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~~~~~i~~~~~- 231 (287)
T 1u59_A 162 ADDSYYT-ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--------EVMAFIEQGKR- 231 (287)
T ss_dssp TCSCEEC-CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--------HHHHHHHTTCC-
T ss_pred cCcceee-ccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--------HHHHHHhcCCc-
Confidence 4332211 1122346889999999988889999999999999999998 99999754321 11111111110
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCC
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHF 592 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 592 (618)
...+......+.+++.+||+.||++||++.|+++.|+++..+...
T Consensus 232 ---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 276 (287)
T 1u59_A 232 ---------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 276 (287)
T ss_dssp ---------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred ---------CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 011122335677788899999999999999999999999876543
No 99
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=6.4e-42 Score=351.06 Aligned_cols=269 Identities=18% Similarity=0.282 Sum_probs=202.0
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC----ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS----QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
.++|.+.+.||+|+||.||+|.. .+|+.||+|+++.. ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 45799999999999999999995 57899999999752 23346688999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++|+|.+++.........+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999865332235689999999999999999999999 99999999999999999999999999998664
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
...... ....|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ............. .
T Consensus 188 ~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~-~- 255 (310)
T 2wqm_A 188 SKTTAA----HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLYSLCKKIEQCD-Y- 255 (310)
T ss_dssp ---------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C------CHHHHHHHHHTTC-S-
T ss_pred CCCccc----cccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch------hHHHHHHHhhccc-C-
Confidence 432211 123488999999999999999999999999999999999999975321 1122222221111 0
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCCCCC
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTTD 595 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 595 (618)
+..... .....+.+++.+||+.||++|||++|+++.|+++.+....+.+
T Consensus 256 ----~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~~ 304 (310)
T 2wqm_A 256 ----PPLPSD---HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLE 304 (310)
T ss_dssp ----CCCCTT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC----
T ss_pred ----CCCccc---ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhhh
Confidence 001111 1234567777799999999999999999999999887665543
No 100
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-41 Score=359.70 Aligned_cols=251 Identities=19% Similarity=0.280 Sum_probs=203.4
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
.++|++.+.||+|+||.||+|.. .+++.||+|++.... .....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 46799999999999999999995 468999999997543 3445789999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC--CCceEEcccCcccccCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG--DFEPKLSDFGLARLMNP 460 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~DfG~a~~~~~ 460 (618)
+++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+++....
T Consensus 130 ~~gg~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 130 LSGGELFDRIAAED---YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp CCCCBHHHHTTCTT---CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred CCCCcHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 99999999987643 3589999999999999999999999 9999999999999974 57799999999987654
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
..... ...||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+..........
T Consensus 204 ~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--------~~~~~~i~~~~~--- 267 (387)
T 1kob_A 204 DEIVK-----VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD--------LETLQNVKRCDW--- 267 (387)
T ss_dssp TSCEE-----EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHHHHHCCC---
T ss_pred Cccee-----eeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCC---
Confidence 33211 22489999999999999999999999999999999999999975321 111111111110
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.............+.+++.+||+.||++|||+.|+++
T Consensus 268 ----~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 268 ----EFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp ----CCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ----CCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 0001111222345677788999999999999999976
No 101
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.8e-42 Score=356.63 Aligned_cols=268 Identities=23% Similarity=0.320 Sum_probs=208.3
Q ss_pred CCCCcEEeecCCeeEEEEEe-----CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeC--CeeEE
Q 007088 308 FSKNNIIGTGRTGATYIAML-----PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK--KERLL 378 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 378 (618)
|++.+.||+|+||.||++.+ .+++.||+|+++... ...+.+.+|++++++++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 48899999999999999864 368899999997643 3356689999999999999999999999884 57899
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
||||+++|+|.+++... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 113 v~e~~~~~~L~~~l~~~-----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH-----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EECCCTTCBHHHHGGGS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEecccCCcHHHHHhhC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccc
Confidence 99999999999999654 389999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCc----cccCHHHHHHHHhc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPES----FKGSLVEWITLLNT 534 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~----~~~~l~~~~~~~~~ 534 (618)
....... .......+|..|+|||.+.+..++.++||||||+++|||++|+.||........ .........
T Consensus 185 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~----- 258 (318)
T 3lxp_A 185 PEGHEYY-RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVL----- 258 (318)
T ss_dssp CTTCSEE-EC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHH-----
T ss_pred ccccccc-ccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHH-----
Confidence 5533221 112233478889999999888899999999999999999999999864211000 000000000
Q ss_pred CCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcC
Q 007088 535 NSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYH 591 (618)
Q Consensus 535 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (618)
...+.+...............+.+++.+||+.||++|||++|+++.|+++.+++.
T Consensus 259 --~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 259 --RLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp --HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 0011111111111222334567788889999999999999999999999988765
No 102
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-41 Score=346.44 Aligned_cols=244 Identities=21% Similarity=0.287 Sum_probs=201.1
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
.++|++.+.||+|+||.||+++. .+|+.||+|+++... ...+.+.+|..+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 35788999999999999999995 478999999997532 3456788999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 85 ~e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ----RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp ECCCCSCBHHHHHHHTS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred EeCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 99999999999997543 489999999999999999999999 99999999999999999999999999998754
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ............
T Consensus 158 ~~~-------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------~~~~~~i~~~~~-- 220 (318)
T 1fot_A 158 DVT-------YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT--------MKTYEKILNAEL-- 220 (318)
T ss_dssp SCB-------CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHHCCC--
T ss_pred Ccc-------ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCC--
Confidence 321 123589999999999999999999999999999999999999975321 111111111100
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERH-----TMFEVYQ 581 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 581 (618)
.+ +......+.+++.+||+.||++|| +++|+++
T Consensus 221 -----~~----p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 221 -----RF----PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp -----CC----CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred -----CC----CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 00 111223566777799999999999 8888864
No 103
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=5.8e-42 Score=354.33 Aligned_cols=253 Identities=21% Similarity=0.304 Sum_probs=197.8
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccC--ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCC-------
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDS--QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK------- 374 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 374 (618)
.++|++.+.||+|+||.||+|+.. +|+.||||+++.. ....+.+.+|++++++++||||+++++++.+.+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 467899999999999999999965 7899999999643 334577999999999999999999999986543
Q ss_pred --------------------------------------------------eeEEEEeecCCCccccccCCCCCCCcCCCH
Q 007088 375 --------------------------------------------------ERLLVYSYLENGTLYDKLHPAEHEVMHMDW 404 (618)
Q Consensus 375 --------------------------------------------------~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~ 404 (618)
..++||||+++|+|.+++..... ....++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~ 163 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS-LEDREH 163 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS-GGGSCH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC-ccchhh
Confidence 27899999999999999976543 244677
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCccc--------ccccCCCCcc
Q 007088 405 PLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS--------TFVNGEFGDL 476 (618)
Q Consensus 405 ~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~--------~~~~~~~gt~ 476 (618)
..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.......... .......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 88999999999999999999 999999999999999999999999999987765322111 1122345899
Q ss_pred cccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHH
Q 007088 477 GYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELH 556 (618)
Q Consensus 477 ~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 556 (618)
.|+|||++.+..++.++|||||||++|||++|..|+.. ......... ..... ........
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~----------~~~~~~~~~-~~~~~---------~~~~~~~~ 300 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME----------RVRIITDVR-NLKFP---------LLFTQKYP 300 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----------HHHHHHHHH-TTCCC---------HHHHHHCH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH----------HHHHHHHhh-ccCCC---------cccccCCh
Confidence 99999999999999999999999999999998766421 011111111 10000 00123345
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 557 QFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 557 ~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+.+++.+||+.||++|||++|+++
T Consensus 301 ~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 301 QEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred hHHHHHHHHccCCCCcCCCHHHHhh
Confidence 6678888999999999999999975
No 104
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.8e-41 Score=344.36 Aligned_cols=260 Identities=27% Similarity=0.438 Sum_probs=195.1
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
.++|++.++||+|+||.||+|+..+ .||+|+++... ...+.+.+|++++++++||||+++++++ ..+..++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 4678999999999999999998644 59999997543 2346689999999999999999999965 5566899999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 100 ~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 100 WCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp CCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred ecCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccc
Confidence 999999999997554 4589999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCcccccccCCCCcccccCCCCCC---CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCcc
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPR---TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSL 538 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~ 538 (618)
... .......||+.|+|||.+. +..++.++||||||+++|||++|+.||......+ .+...... .. .
T Consensus 174 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~---~~-~ 243 (289)
T 3og7_A 174 SGS--HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD----QIIEMVGR---GS-L 243 (289)
T ss_dssp ------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH----HHHHHHHH---TS-C
T ss_pred ccc--ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH----HHHHHhcc---cc-c
Confidence 211 1112334899999999886 5678889999999999999999999997543211 11111111 10 0
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhh
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAE 588 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 588 (618)
. +.+ ..........+.+++.+||+.||.+|||+.|+++.|+++.+
T Consensus 244 ~----~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 244 S----PDL-SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp C----CCT-TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred C----cch-hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 0 000 01112234567788889999999999999999999999865
No 105
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.9e-42 Score=381.22 Aligned_cols=259 Identities=25% Similarity=0.351 Sum_probs=211.9
Q ss_pred hhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeec
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
..++|++.++||+|+||.||+|...++..||||+++......++|.+|++++++++||||+++++++.+ +..++||||+
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 456788899999999999999999888899999998776677889999999999999999999999876 6789999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
++|+|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 344 ~~gsL~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 417 (535)
T 2h8h_A 344 SKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE- 417 (535)
T ss_dssp TTEEHHHHHSHHHH--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-
T ss_pred cCCcHHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-
Confidence 99999999975322 3589999999999999999999999 99999999999999999999999999998765321
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
........++..|+|||.+.+..++.++|||||||++|||++ |+.||..... .+..........
T Consensus 418 --~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~--------~~~~~~i~~~~~----- 482 (535)
T 2h8h_A 418 --YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--------REVLDQVERGYR----- 482 (535)
T ss_dssp --HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH--------HHHHHHHHTTCC-----
T ss_pred --eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCCC-----
Confidence 111122346789999999988899999999999999999999 9999975322 111111111110
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
..........+.+++.+||+.||++|||+++|++.|+++...
T Consensus 483 -----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 483 -----MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp -----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred -----CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 011122334677888899999999999999999999987544
No 106
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=360.95 Aligned_cols=275 Identities=20% Similarity=0.276 Sum_probs=214.4
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCC--eeEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK--ERLLV 379 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lV 379 (618)
.++|.+.++||+|+||.||+|... +++.||||+++... ...+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 357888999999999999999964 58999999997533 44677889999999999999999999998765 67999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee----CCCCceEEcccCcc
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL----DGDFEPKLSDFGLA 455 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DfG~a 455 (618)
|||+++|+|.+++..... ...+++..++.++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||++
T Consensus 88 ~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp ECCCTTEEHHHHTTSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred EecCCCCCHHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 999999999999976543 23489999999999999999999999 99999999999999 78888999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCCCCCCC--------CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHH
Q 007088 456 RLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT--------LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVE 527 (618)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~ 527 (618)
+....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||............+..
T Consensus 164 ~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~ 238 (396)
T 4eut_A 164 RELEDDEQ-----FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYK 238 (396)
T ss_dssp EECCCGGG-----SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHH
T ss_pred eEccCCCc-----cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHH
Confidence 87654322 123458999999998754 56788999999999999999999999764433222222222
Q ss_pred HHHHHhcCCccchh---c------cccc--cCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 528 WITLLNTNSSLETA---I------DKSL--LGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 528 ~~~~~~~~~~~~~~---~------d~~l--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
...... ....... . ...+ ...........+.+++.+||+.||++||+++|+++.++++.++
T Consensus 239 ~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 239 IITGKP-SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp HHHSCC-TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred HhcCCC-cccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 111100 0000000 0 0011 1122356777888999999999999999999999999998764
No 107
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.3e-41 Score=351.70 Aligned_cols=261 Identities=24% Similarity=0.361 Sum_probs=206.9
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcE--EEEEEeccC--ccCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCF--IMIKRLEDS--QHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 379 (618)
++|+..+.||+|+||.||+|+. .++.. |++|+++.. ....+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 5788899999999999999995 45654 499988653 23455689999999999 899999999999999999999
Q ss_pred EeecCCCccccccCCCC------------CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCce
Q 007088 380 YSYLENGTLYDKLHPAE------------HEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEP 447 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 447 (618)
|||+++|+|.+++.... .....+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeE
Confidence 99999999999997654 2234699999999999999999999999 99999999999999999999
Q ss_pred EEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHH
Q 007088 448 KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLV 526 (618)
Q Consensus 448 kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~ 526 (618)
||+|||+++........ ....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... .
T Consensus 182 kL~Dfg~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--------~ 248 (327)
T 1fvr_A 182 KIADFGLSRGQEVYVKK-----TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--------A 248 (327)
T ss_dssp EECCTTCEESSCEECCC---------CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------H
T ss_pred EEcccCcCccccccccc-----cCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH--------H
Confidence 99999999753321111 11236789999999988889999999999999999998 9999975331 1
Q ss_pred HHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCC
Q 007088 527 EWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHF 592 (618)
Q Consensus 527 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 592 (618)
+......... ...........+.+++.+||+.||.+|||++|+++.|+++.++...
T Consensus 249 ~~~~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 304 (327)
T 1fvr_A 249 ELYEKLPQGY----------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304 (327)
T ss_dssp HHHHHGGGTC----------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSC
T ss_pred HHHHHhhcCC----------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcC
Confidence 1222211110 0011112234677788899999999999999999999999886543
No 108
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=5e-42 Score=359.59 Aligned_cols=211 Identities=21% Similarity=0.266 Sum_probs=184.7
Q ss_pred ccccCHHHHHHhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCC-----CCCccce
Q 007088 293 VEKMRLSDLMKATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR-----HRNLVPL 366 (618)
Q Consensus 293 ~~~~~~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l 366 (618)
...+++.+.....++|.+.++||+|+||.||+|.. .+++.||||+++......+.+..|++++++++ ||||+++
T Consensus 22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 34556666666788999999999999999999996 57899999999876666677888999999986 9999999
Q ss_pred eEEEEeCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC---
Q 007088 367 LGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG--- 443 (618)
Q Consensus 367 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--- 443 (618)
++++...+..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.
T Consensus 102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~ 175 (360)
T 3llt_A 102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNY--NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYF 175 (360)
T ss_dssp EEEEEETTEEEEEECCC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTC
T ss_pred cceeeECCeeEEEEcCC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccc
Confidence 99999999999999999 8899999976543 3589999999999999999999999 9999999999999975
Q ss_pred ----------------------CCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHH
Q 007088 444 ----------------------DFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVV 501 (618)
Q Consensus 444 ----------------------~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvi 501 (618)
++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 248 (360)
T 3llt_A 176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-------GSIINTRQYRAPEVILNLGWDVSSDMWSFGCV 248 (360)
T ss_dssp CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-------CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHH
T ss_pred cccccchhcccccccccccccCCCCEEEEeccCceecCCCC-------cCccCcccccCcHHHcCCCCCCccchHHHHHH
Confidence 7889999999998654322 12348999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCC
Q 007088 502 LLELITGERPTHLTN 516 (618)
Q Consensus 502 l~elltG~~Pf~~~~ 516 (618)
+|||++|+.||....
T Consensus 249 l~ell~g~~pf~~~~ 263 (360)
T 3llt_A 249 LAELYTGSLLFRTHE 263 (360)
T ss_dssp HHHHHHSSCSCCCSS
T ss_pred HHHHHHCCCCCCCCc
Confidence 999999999997643
No 109
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.1e-41 Score=354.00 Aligned_cols=248 Identities=23% Similarity=0.313 Sum_probs=200.5
Q ss_pred HhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC----ccCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCee
Q 007088 303 KATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS----QHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKER 376 (618)
Q Consensus 303 ~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 376 (618)
...++|.+.+.||+|+||.||+|+. .+++.||+|+++.. ....+.+..|..++.++ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 3457899999999999999999996 46899999999753 24456788899999876 899999999999999999
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
|+||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 166 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCH----KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK 166 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhh
Confidence 99999999999999987543 489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~ 536 (618)
........ ....+||+.|+|||++.+..++.++|||||||++|||++|+.||...+. .+.........
T Consensus 167 ~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~ 234 (345)
T 1xjd_A 167 ENMLGDAK----TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--------EELFHSIRMDN 234 (345)
T ss_dssp CCCCTTCC----BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCC
T ss_pred hcccCCCc----ccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHhCC
Confidence 64332221 1234589999999999999999999999999999999999999975332 11111111111
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 007088 537 SLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMF-EVY 580 (618)
Q Consensus 537 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 580 (618)
... +......+.+++.+||+.||++||++. |++
T Consensus 235 -------~~~----p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 235 -------PFY----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp -------CCC----CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred -------CCC----CcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 001 111224566777799999999999997 553
No 110
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.5e-42 Score=353.46 Aligned_cols=257 Identities=23% Similarity=0.385 Sum_probs=199.8
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCc----EEEEEEeccC--ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGC----FIMIKRLEDS--QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
++|++.+.||+|+||.||+|.. .+++ +|++|.+... ....+.+.+|+.++++++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 5788899999999999999995 3444 4678877543 356778999999999999999999999998765 789
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
|+||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 94 v~~~~~~g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~ 167 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EECCCSSCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred EEEecCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence 999999999999987644 3589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
........ .....+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... .+...... ..
T Consensus 168 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~~~~~~~---~~- 236 (327)
T 3lzb_A 168 GAEEKEYH--AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-----EISSILEK---GE- 236 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHHHHT---TC-
T ss_pred cCcccccc--ccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH-----HHHHHHHc---CC-
Confidence 54322211 122346789999999999999999999999999999999 99999764321 12221111 10
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
...........+.+++.+||+.||.+||++.|+++.|+++.+.
T Consensus 237 ---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 237 ---------RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ---------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred ---------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 0111122334577788899999999999999999999998753
No 111
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.6e-42 Score=357.54 Aligned_cols=268 Identities=22% Similarity=0.340 Sum_probs=212.5
Q ss_pred HHHHHhhccCCCCcEEeecCCeeEEEEEeC------CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEE
Q 007088 299 SDLMKATNSFSKNNIIGTGRTGATYIAMLP------GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFC 370 (618)
Q Consensus 299 ~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~ 370 (618)
++.....++|++.+.||+|+||.||+|+.. +++.||+|++.... .....+.+|++++++++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 344556788999999999999999999853 37889999997543 3345688999999999999999999999
Q ss_pred EeCCeeEEEEeecCCCccccccCCCCC------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC
Q 007088 371 VAKKERLLVYSYLENGTLYDKLHPAEH------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD 444 (618)
Q Consensus 371 ~~~~~~~lV~e~~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 444 (618)
.+.+..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~ 174 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 174 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTT
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCC
Confidence 999999999999999999999865321 113578999999999999999999999 99999999999999999
Q ss_pred CceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCcccc
Q 007088 445 FEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKG 523 (618)
Q Consensus 445 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~ 523 (618)
+.+||+|||+++......... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------ 246 (322)
T 1p4o_A 175 FTVKIGDFGMTRDIYETDYYR--KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN------ 246 (322)
T ss_dssp CCEEECCTTCCCGGGGGGCEE--GGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH------
T ss_pred CeEEECcCccccccccccccc--cccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH------
Confidence 999999999998654322111 1122346889999999988889999999999999999999 8899865321
Q ss_pred CHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 524 SLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 524 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
.+......... .. .........+.+++.+||+.||.+|||+.|+++.|+++.+.
T Consensus 247 --~~~~~~~~~~~-~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 247 --EQVLRFVMEGG-LL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp --HHHHHHHHTTC-CC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred --HHHHHHHHcCC-cC---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 11111111111 00 01122334577788899999999999999999999987654
No 112
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.8e-42 Score=358.18 Aligned_cols=263 Identities=22% Similarity=0.239 Sum_probs=200.7
Q ss_pred HHHhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC------ccCHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 007088 301 LMKATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS------QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373 (618)
Q Consensus 301 l~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 373 (618)
+....++|.+.+.||+|+||.||+|.. .++..||+|++... ....+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 455677899999999999999999995 56889999998643 23456789999999999999999999999999
Q ss_pred CeeEEEEeecCCCccccccCCCCC------------------------------------CCcCCCHHHHHHHHHHHHHH
Q 007088 374 KERLLVYSYLENGTLYDKLHPAEH------------------------------------EVMHMDWPLRLRIAIGSARG 417 (618)
Q Consensus 374 ~~~~lV~e~~~~gsL~~~l~~~~~------------------------------------~~~~l~~~~~~~i~~~i~~~ 417 (618)
+..++||||+++|+|.+++..... ....+++..++.++.||+.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 999999999999999998852110 01224677888999999999
Q ss_pred HHHHHhCCCCCceecCCCCCCeeeCCCC--ceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCC--CCCCCcc
Q 007088 418 LAWLHHNCNPRIIHRNISSKCILLDGDF--EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT--LVATPKG 493 (618)
Q Consensus 418 L~~LH~~~~~~ivH~Dlkp~NIll~~~~--~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~s 493 (618)
|+|||+. +|+||||||+||+++.++ .+||+|||+++.................||+.|+|||++.+ ..++.++
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999999 999999999999998776 89999999998654322222222234458999999998865 6789999
Q ss_pred chHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCC
Q 007088 494 DVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKER 573 (618)
Q Consensus 494 DVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~R 573 (618)
||||||+++|||++|+.||...... +............ ...........+.+++.+||+.||.+|
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~--------~~~~~~~~~~~~~-------~~~~~~~~~~~~~~li~~~l~~~p~~R 322 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDA--------DTISQVLNKKLCF-------ENPNYNVLSPLARDLLSNLLNRNVDER 322 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCT-------TSGGGGGSCHHHHHHHHHHSCSCTTTS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChH--------HHHHHHHhccccc-------CCcccccCCHHHHHHHHHHcCCChhHC
Confidence 9999999999999999999754321 1111111111000 000011123456778889999999999
Q ss_pred CCHHHHHH
Q 007088 574 HTMFEVYQ 581 (618)
Q Consensus 574 Ps~~evl~ 581 (618)
|++.|+++
T Consensus 323 ps~~~~l~ 330 (345)
T 3hko_A 323 FDAMRALQ 330 (345)
T ss_dssp CCHHHHHH
T ss_pred CCHHHHhc
Confidence 99999986
No 113
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.4e-42 Score=368.51 Aligned_cols=258 Identities=19% Similarity=0.219 Sum_probs=204.0
Q ss_pred HHHHHHhhccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 007088 298 LSDLMKATNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372 (618)
Q Consensus 298 ~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 372 (618)
+.++....++|++.++||+|+||.||+|+.. +++.||+|++++.. ...+.+.+|+.+++.++||||+++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3455567789999999999999999999964 68999999996522 233457899999999999999999999999
Q ss_pred CCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEccc
Q 007088 373 KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDF 452 (618)
Q Consensus 373 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 452 (618)
.+..|+||||+++|+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+||
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~-----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DF 212 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 212 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEecc
Confidence 99999999999999999998643 389999999999999999999999 9999999999999999999999999
Q ss_pred CcccccCCCCCcccccccCCCCcccccCCCCCCCCC----CCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHH
Q 007088 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLV----ATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEW 528 (618)
Q Consensus 453 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~ 528 (618)
|+++........ .....+||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+.. ..
T Consensus 213 G~a~~~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--------~~ 281 (410)
T 3v8s_A 213 GTCMKMNKEGMV---RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--------GT 281 (410)
T ss_dssp TTCEECCTTSEE---ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HH
T ss_pred ceeEeeccCCcc---cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh--------hH
Confidence 999876543321 122345999999999987655 789999999999999999999999754321 11
Q ss_pred HHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCC--CCCHHHHHH
Q 007088 529 ITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKE--RHTMFEVYQ 581 (618)
Q Consensus 529 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 581 (618)
......... .+...........+.+++.+||..+|.+ ||+++||++
T Consensus 282 ~~~i~~~~~-------~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 282 YSKIMNHKN-------SLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp HHHHHTHHH-------HCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred HHHHHhccc-------cccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 111110000 0000000112235566677999999988 999999975
No 114
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=9.5e-42 Score=352.70 Aligned_cols=247 Identities=21% Similarity=0.225 Sum_probs=191.7
Q ss_pred hccCCCCcEEeecCCeeEEEEEe----CCCcEEEEEEeccCc-----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML----PGGCFIMIKRLEDSQ-----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKE 375 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 375 (618)
.++|++.+.||+|+||.||+++. .+++.||+|+++... .....+.+|+.++++++||||+++++++.+.+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 36799999999999999999996 578999999997642 234557889999999999999999999999999
Q ss_pred eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcc
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLA 455 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 455 (618)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~ 168 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG----IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLC 168 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred EEEEEeCCCCCcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcc
Confidence 999999999999999986543 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcC
Q 007088 456 RLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN 535 (618)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~ 535 (618)
+........ .....||+.|+|||++.+..++.++||||||+++|||++|+.||..... ..........
T Consensus 169 ~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~~~~~i~~~ 236 (327)
T 3a62_A 169 KESIHDGTV----THTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR--------KKTIDKILKC 236 (327)
T ss_dssp --------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHT
T ss_pred cccccCCcc----ccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhC
Confidence 764332211 1234589999999999999999999999999999999999999975332 1111111111
Q ss_pred CccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 007088 536 SSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERH-----TMFEVYQ 581 (618)
Q Consensus 536 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 581 (618)
. ..+ +......+.+++.+||+.||++|| ++.|+++
T Consensus 237 ~-------~~~----p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 237 K-------LNL----PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp C-------CCC----CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred C-------CCC----CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 0 000 111234566777799999999999 6777754
No 115
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.4e-41 Score=347.08 Aligned_cols=265 Identities=20% Similarity=0.309 Sum_probs=206.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-----CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeC--Cee
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-----PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK--KER 376 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 376 (618)
++|++.+.||+|+||.||+|++ .+++.||+|+++... ...+.+.+|++++++++||||+++++++.+. +..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4588899999999999999983 468999999997532 4557899999999999999999999999876 568
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNK---NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHT---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEEeCCCCcHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccc
Confidence 99999999999999995443 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCC-------CCccccCHHHHH
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNA-------PESFKGSLVEWI 529 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~-------~~~~~~~l~~~~ 529 (618)
......... .......+|..|+|||.+.+..++.++||||||+++|||++|+.|+..... ............
T Consensus 175 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (302)
T 4e5w_A 175 AIETDKEYY-TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV 253 (302)
T ss_dssp ECCTTCCEE-ECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH
T ss_pred cccCCCcce-eccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH
Confidence 775543221 122234578889999999888899999999999999999999998643110 000000111111
Q ss_pred HHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhh
Q 007088 530 TLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIA 587 (618)
Q Consensus 530 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 587 (618)
...... ............+.+++.+||+.||.+|||+.|+++.|+++.
T Consensus 254 ~~~~~~----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 254 NTLKEG----------KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHTT----------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHhcc----------CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 111111 111112223456778888999999999999999999999875
No 116
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=378.16 Aligned_cols=262 Identities=19% Similarity=0.312 Sum_probs=205.5
Q ss_pred CCCCc-EEeecCCeeEEEEEeC---CCcEEEEEEeccC--ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 308 FSKNN-IIGTGRTGATYIAMLP---GGCFIMIKRLEDS--QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 308 y~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
+.+.+ .||+|+||.||+|... ++..||||+++.. ....+++.+|++++++++||||+++++++.. +..++|||
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E 415 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVME 415 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEE
Confidence 33334 7999999999999853 5678999999764 3456789999999999999999999999976 56899999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 416 ~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~ 489 (613)
T 2ozo_A 416 MAGGGPLHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGAD 489 (613)
T ss_dssp CCTTCBHHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--
T ss_pred eCCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCC
Confidence 999999999997543 4599999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
...... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .+.. .......
T Consensus 490 ~~~~~~-~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-----~~~~---~i~~~~~--- 557 (613)
T 2ozo_A 490 DSYYTA-RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-----EVMA---FIEQGKR--- 557 (613)
T ss_dssp -------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH-----HHHH---HHHTTCC---
T ss_pred Cceeee-ccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH-----HHHH---HHHcCCC---
Confidence 221111 112235688999999988899999999999999999998 99999764331 1111 1111110
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCCCCC
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTTD 595 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 595 (618)
...+......+.+++.+||+.||++||++.++++.|+.+........+
T Consensus 558 -------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~~~ 605 (613)
T 2ozo_A 558 -------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVE 605 (613)
T ss_dssp -------CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCSCC
T ss_pred -------CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhccccC
Confidence 111222345677888899999999999999999999998877654443
No 117
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.3e-42 Score=359.18 Aligned_cols=270 Identities=21% Similarity=0.302 Sum_probs=208.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-----CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEe--CCeeE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-----PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVA--KKERL 377 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 377 (618)
++|++.+.||+|+||.||++.. .+++.||+|++.... ...+.+.+|++++++++||||+++++++.. .+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 5788899999999999999983 468999999997653 344668999999999999999999999874 45688
Q ss_pred EEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccc
Q 007088 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARL 457 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 457 (618)
+||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 103 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp EEEECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred EEEeecCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccccee
Confidence 9999999999999997543 3589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCC-------ccccCHHHHHH
Q 007088 458 MNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPE-------SFKGSLVEWIT 530 (618)
Q Consensus 458 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~-------~~~~~l~~~~~ 530 (618)
........ .......+|..|+|||++.+..++.++||||||+++|||++|+.||....... ...........
T Consensus 177 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (327)
T 3lxl_A 177 LPLDKDYY-VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLE 255 (327)
T ss_dssp CCTTCSEE-ECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHH
T ss_pred cccCCccc-eeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHH
Confidence 65433221 11223447888999999988889999999999999999999999986422100 00000011111
Q ss_pred HHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCC
Q 007088 531 LLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHF 592 (618)
Q Consensus 531 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 592 (618)
.+...............+.+++.+||+.||++|||++|+++.|+.+......
T Consensus 256 ----------~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 307 (327)
T 3lxl_A 256 ----------LLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRG 307 (327)
T ss_dssp ----------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC------
T ss_pred ----------HhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcC
Confidence 1111111112223345677888899999999999999999999998765543
No 118
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=9.9e-42 Score=355.63 Aligned_cols=247 Identities=18% Similarity=0.229 Sum_probs=200.2
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccC----ccCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDS----QHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 378 (618)
.++|+..+.||+|+||.||+|+.. +++.||+|+++.. ....+.+..|..++..+ +||||+++++++.+.+..|+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 467999999999999999999965 4889999999753 24456788999999988 89999999999999999999
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++..
T Consensus 99 v~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171 (353)
T ss_dssp EEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence 999999999999987543 489999999999999999999999 9999999999999999999999999999864
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCcc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSL 538 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~ 538 (618)
...... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||...+. .+..........
T Consensus 172 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--------~~~~~~i~~~~~- 238 (353)
T 2i0e_A 172 IWDGVT----TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--------DELFQSIMEHNV- 238 (353)
T ss_dssp CCTTCC----BCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCC-
T ss_pred ccCCcc----cccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH--------HHHHHHHHhCCC-
Confidence 332221 2234589999999999999999999999999999999999999975332 111111111110
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHT-----MFEVYQ 581 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 581 (618)
. .+......+.+++.+||+.||.+||+ ++|+++
T Consensus 239 ------~----~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 239 ------A----YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp ------C----CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred ------C----CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 0 01112345667777999999999996 456543
No 119
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.3e-41 Score=351.40 Aligned_cols=250 Identities=20% Similarity=0.296 Sum_probs=179.6
Q ss_pred CcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeeEEEEeecCCCcc
Q 007088 311 NNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKKERLLVYSYLENGTL 388 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~~gsL 388 (618)
.+.||+|+||.||+|.. .+++.||+|++... ....+.+|+.++++++ ||||+++++++.+.+..++||||+++|+|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 47899999999999996 46899999999653 4567889999999997 99999999999999999999999999999
Q ss_pred ccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC---ceEEcccCcccccCCCCCcc
Q 007088 389 YDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF---EPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 389 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~DfG~a~~~~~~~~~~ 465 (618)
.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+++.........
T Consensus 94 ~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 166 (325)
T 3kn6_A 94 FERIKKKK----HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL 166 (325)
T ss_dssp HHHHHHCS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred HHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcc
Confidence 99997643 499999999999999999999999 999999999999997665 89999999998765433221
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhcccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKS 545 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 545 (618)
....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .....+...........
T Consensus 167 ----~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~~~~i~~~~~~------- 234 (325)
T 3kn6_A 167 ----KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT-CTSAVEIMKKIKKGDFS------- 234 (325)
T ss_dssp ---------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCCHHHHHHHHTTTCCC-------
T ss_pred ----cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc-cccHHHHHHHHHcCCCC-------
Confidence 223479999999999999999999999999999999999999976443211 11222222222111100
Q ss_pred ccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 546 LLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 546 l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
............+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 235 FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp CCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 000000112356777888999999999999999863
No 120
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1e-41 Score=355.33 Aligned_cols=244 Identities=18% Similarity=0.224 Sum_probs=201.5
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
.++|+..+.||+|+||.||+++. .+|+.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 35789999999999999999996 468999999996532 3456788999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 120 ~e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~ 192 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192 (350)
T ss_dssp EECCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EcCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceecc
Confidence 99999999999997543 489999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
... ....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+..........
T Consensus 193 ~~~-------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~~-- 255 (350)
T 1rdq_E 193 GRT-------WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--------IQIYEKIVSGKV-- 255 (350)
T ss_dssp SCB-------CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCC--
T ss_pred CCc-------ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--------HHHHHHHHcCCC--
Confidence 321 123489999999999999999999999999999999999999975321 111111111100
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHT-----MFEVYQ 581 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 581 (618)
.+ +......+.+++.+||+.||.+||+ ++|+++
T Consensus 256 -----~~----p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 256 -----RF----PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp -----CC----CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred -----CC----CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 01 1112345667777999999999998 777754
No 121
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=6.2e-41 Score=356.03 Aligned_cols=252 Identities=18% Similarity=0.244 Sum_probs=191.5
Q ss_pred ccCCCC-cEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHh-cCCCCCccceeEEEEe----CCeeEE
Q 007088 306 NSFSKN-NIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLG-SVRHRNLVPLLGFCVA----KKERLL 378 (618)
Q Consensus 306 ~~y~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~----~~~~~l 378 (618)
++|.+. +.||+|+||.||++.. .+++.||||+++.. ..+.+|++++. ..+||||+++++++.. .+..|+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l 136 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 136 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence 456655 6899999999999995 46899999999643 35678888874 4589999999999876 567899
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC---CCceEEcccCcc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG---DFEPKLSDFGLA 455 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfG~a 455 (618)
||||+++|+|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||++
T Consensus 137 v~E~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 137 VMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEeCCCCcHHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccc
Confidence 9999999999999976542 4599999999999999999999999 9999999999999997 789999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcC
Q 007088 456 RLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN 535 (618)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~ 535 (618)
+....... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ......... .
T Consensus 212 ~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-~~~~~i~~~--~ 283 (400)
T 1nxk_A 212 KETTSHNS-----LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-GMKTRIRMG--Q 283 (400)
T ss_dssp EECC----------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCC-SHHHHHHHT--C
T ss_pred cccCCCCc-----cccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccH-HHHHHHHcC--c
Confidence 87543221 123348999999999999999999999999999999999999998654332211 121211110 0
Q ss_pred CccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 536 SSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 536 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.. ............+.+++.+||+.||++|||+.|+++.
T Consensus 284 ~~--------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 284 YE--------FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp CC--------CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred cc--------CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00 0000111223456777789999999999999999874
No 122
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.4e-41 Score=339.99 Aligned_cols=248 Identities=19% Similarity=0.285 Sum_probs=182.9
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
.++|.+.+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 46789999999999999999995 578999999996532 3346789999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRV---KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EECCTTEEHHHHHHTCS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 99999999999987543 4589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
...... ....||+.|+|||.+.+..++.++||||||+++|||++|+.||......+.... ... .
T Consensus 164 ~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~--------~~~----~ 227 (278)
T 3cok_A 164 MPHEKH----YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNK--------VVL----A 227 (278)
T ss_dssp --------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------CCS----S
T ss_pred CCCCcc----eeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHH--------Hhh----c
Confidence 322211 123489999999999998999999999999999999999999976443211100 000 0
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+... +......+.+++.+||+.||++|||++|+++
T Consensus 228 ---~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 228 ---DYEM----PSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp ---CCCC----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---ccCC----ccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 0001 1112345667788999999999999999875
No 123
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3e-42 Score=368.92 Aligned_cols=262 Identities=18% Similarity=0.187 Sum_probs=205.7
Q ss_pred CHHHHHHhhccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEE
Q 007088 297 RLSDLMKATNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCV 371 (618)
Q Consensus 297 ~~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 371 (618)
.+.++....++|++.++||+|+||.||+|+.. +++.||+|++++.. ...+.+.+|..++.+++||||+++++++.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34566667889999999999999999999965 57899999996522 22334889999999999999999999999
Q ss_pred eCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcc
Q 007088 372 AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSD 451 (618)
Q Consensus 372 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 451 (618)
+.+..++||||+++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~---~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~D 218 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFE---DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLAD 218 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEecCCCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcc
Confidence 9999999999999999999997643 3599999999999999999999999 999999999999999999999999
Q ss_pred cCcccccCCCCCcccccccCCCCcccccCCCCCC-----CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHH
Q 007088 452 FGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR-----TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLV 526 (618)
Q Consensus 452 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~ 526 (618)
||+++......... ....+||+.|+|||++. ...++.++|||||||++|||++|+.||...+..+
T Consensus 219 FGla~~~~~~~~~~---~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~------- 288 (437)
T 4aw2_A 219 FGSCLKLMEDGTVQ---SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE------- 288 (437)
T ss_dssp CTTCEECCTTSCEE---CCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-------
T ss_pred hhhhhhcccCCCcc---cccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhH-------
Confidence 99998765433221 12345999999999886 5678999999999999999999999997643211
Q ss_pred HHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCC--CCCHHHHHH
Q 007088 527 EWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKE--RHTMFEVYQ 581 (618)
Q Consensus 527 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 581 (618)
......... .....+. ........+.+++.+||..+|++ ||+++|+++
T Consensus 289 -~~~~i~~~~--~~~~~p~----~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 289 -TYGKIMNHK--ERFQFPT----QVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp -HHHHHHTHH--HHCCCCS----SCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred -HHHhhhhcc--ccccCCc----ccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 111111000 0000000 00112234566667999888888 999999865
No 124
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=6.9e-42 Score=351.54 Aligned_cols=273 Identities=23% Similarity=0.315 Sum_probs=213.9
Q ss_pred CHHHHHHhhccCCCCcEEeecCCeeEEEEEe------CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcC-CCCCcccee
Q 007088 297 RLSDLMKATNSFSKNNIIGTGRTGATYIAML------PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSV-RHRNLVPLL 367 (618)
Q Consensus 297 ~~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~ 367 (618)
...+.....++|.+.+.||+|+||.||+|.. .+++.||+|+++... ...+.+.+|+.++.++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3444445568899999999999999999983 356899999997643 2345788999999999 799999999
Q ss_pred EEEEeCC-eeEEEEeecCCCccccccCCCCCC------------CcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCC
Q 007088 368 GFCVAKK-ERLLVYSYLENGTLYDKLHPAEHE------------VMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNI 434 (618)
Q Consensus 368 ~~~~~~~-~~~lV~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl 434 (618)
+++...+ ..++||||+++|+|.+++...... ...+++..++.++.|++.||.|||+. +|+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccC
Confidence 9988765 489999999999999999765431 12388999999999999999999999 9999999
Q ss_pred CCCCeeeCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCC
Q 007088 435 SSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTH 513 (618)
Q Consensus 435 kp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~ 513 (618)
||+||+++.++.+||+|||+++.......... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 252 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVR--KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEE--ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred ccceEEECCCCCEEECCCccccccccCcccee--ccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence 99999999999999999999987654322111 122336889999999988899999999999999999998 999997
Q ss_pred CCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcC
Q 007088 514 LTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYH 591 (618)
Q Consensus 514 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (618)
.....+ .+.. ....... ..........+.+++.+||+.||.+|||+.|+++.|+++.+...
T Consensus 253 ~~~~~~----~~~~---~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 253 GVKIDE----EFCR---RLKEGTR----------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp TCCCSH----HHHH---HHHHTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred ccchhH----HHHH---HhccCcc----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 543211 1111 1111100 00111123457778889999999999999999999999987543
No 125
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.3e-41 Score=347.07 Aligned_cols=265 Identities=21% Similarity=0.309 Sum_probs=187.4
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
.++|++.+.||+|+||.||+|.. .+++.||+|+++... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 46799999999999999999995 568999999986532 344678899999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCC--CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 382 YLENGTLYDKLHPAEH--EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|++ |+|.+++..... ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 599888764321 124589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcC-Cc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN-SS 537 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~-~~ 537 (618)
..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ .+.......... ..
T Consensus 160 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~i~~~~~~~~~~ 231 (317)
T 2pmi_A 160 IPVNT----FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE----QLKLIFDIMGTPNES 231 (317)
T ss_dssp SCCCC----CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCSCCTT
T ss_pred CCccc----CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHHHhCCCChh
Confidence 32221 123348999999999876 468999999999999999999999997643211 111111110000 00
Q ss_pred cchh------ccccc------------cCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 538 LETA------IDKSL------------LGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 538 ~~~~------~d~~l------------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.... ..+.+ ...........+.+++.+||+.||++|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 232 LWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp TCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0000 00000 00000012245777888999999999999999875
No 126
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-41 Score=351.29 Aligned_cols=261 Identities=24% Similarity=0.372 Sum_probs=202.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCC-----CcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPG-----GCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
++|+..+.||+|+||.||+|.... +..||+|+++... .....+.+|+.++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 456778999999999999998532 3469999997543 334568899999999999999999999999999999
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 124 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKD---GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEECCTTEEHHHHHHHTT---TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred EEeCCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 999999999999987543 3589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
........ ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..... .+..........
T Consensus 198 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--------~~~~~~~~~~~~ 268 (333)
T 1mqb_A 198 EDDPEATY-TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--------HEVMKAINDGFR 268 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTTCC
T ss_pred cccccccc-ccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH--------HHHHHHHHCCCc
Confidence 54322111 1112336788999999988899999999999999999999 9999965321 111111111110
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcC
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYH 591 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (618)
..........+.+++.+||+.||++||++.|+++.|+++.+...
T Consensus 269 ----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 269 ----------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp ----------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred ----------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 01111233467778889999999999999999999999876543
No 127
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=8.3e-42 Score=347.04 Aligned_cols=259 Identities=20% Similarity=0.302 Sum_probs=204.8
Q ss_pred hccCCCCc-EEeecCCeeEEEEEe---CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeE
Q 007088 305 TNSFSKNN-IIGTGRTGATYIAML---PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERL 377 (618)
Q Consensus 305 ~~~y~~~~-~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 377 (618)
.++|.+.+ .||+|+||.||+|.. .+++.||+|+++... ...+++.+|++++++++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 45677777 999999999999963 347899999997543 2356789999999999999999999999 566789
Q ss_pred EEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccc
Q 007088 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARL 457 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 457 (618)
+||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 94 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNR----HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp EEEECCTTEEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEeCCCCCHHHHHHhCc----CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 9999999999999997643 489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCC
Q 007088 458 MNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNS 536 (618)
Q Consensus 458 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~ 536 (618)
.......... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... .+.........
T Consensus 167 ~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~~ 237 (291)
T 1xbb_A 167 LRADENYYKA-QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--------SEVTAMLEKGE 237 (291)
T ss_dssp CCTTCSEEEC-----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHHHTTC
T ss_pred eccCCCcccc-cccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCC
Confidence 6543322111 122336788999999988888999999999999999999 9999975332 11111111111
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 537 SLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 537 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
. ..........+.+++.+||+.||++||++.|+++.|+++....
T Consensus 238 ~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 238 R----------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp C----------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred C----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 0 0111223346777888999999999999999999999987653
No 128
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=3.8e-41 Score=345.84 Aligned_cols=269 Identities=21% Similarity=0.342 Sum_probs=201.0
Q ss_pred HHHHHhhccCCCCcEEeecCCeeEEEEEeC----CCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEE
Q 007088 299 SDLMKATNSFSKNNIIGTGRTGATYIAMLP----GGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCV 371 (618)
Q Consensus 299 ~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 371 (618)
.++....++|.+.+.||+|+||.||+|... ++..||+|+++... ...+.+.+|+.++++++||||+++++++.
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence 333445678999999999999999999843 35689999997543 23456889999999999999999999998
Q ss_pred eCCe-----eEEEEeecCCCccccccCCCC--CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC
Q 007088 372 AKKE-----RLLVYSYLENGTLYDKLHPAE--HEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD 444 (618)
Q Consensus 372 ~~~~-----~~lV~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 444 (618)
+.+. .++||||+++|+|.+++.... .....+++..++.++.|++.||.|||+. +|+||||||+||+++.+
T Consensus 107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDD 183 (313)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTT
T ss_pred eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCC
Confidence 7653 499999999999999884321 2235699999999999999999999999 99999999999999999
Q ss_pred CceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCcccc
Q 007088 445 FEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKG 523 (618)
Q Consensus 445 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~ 523 (618)
+.+||+|||+++.......... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----- 256 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDYYRQ--GRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH----- 256 (313)
T ss_dssp SCEEECSCSCC------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----
T ss_pred CcEEEeecCcceecccccccCc--ccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH-----
Confidence 9999999999987644321111 112336789999999998899999999999999999999 88898754321
Q ss_pred CHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 524 SLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 524 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
...... ..... ..........+.+++.+||+.||.+|||+.++++.|+++.++.
T Consensus 257 ~~~~~~---~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 257 EMYDYL---LHGHR----------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp GHHHHH---HTTCC----------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHHHHH---HcCCC----------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 111111 11100 0111122346778888999999999999999999999998765
No 129
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.8e-41 Score=343.95 Aligned_cols=252 Identities=21% Similarity=0.325 Sum_probs=200.4
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CC-------cEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCee
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GG-------CFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 376 (618)
++|.+.+.||+|+||.||+|... ++ ..||+|++.... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 57888999999999999999843 23 579999996543 4567799999999999999999999999999999
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCc--------eE
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE--------PK 448 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--------~k 448 (618)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++. +|
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~k 161 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNK---NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIK 161 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTG---GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred EEEEECCCCCCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceee
Confidence 99999999999999997643 3489999999999999999999999 9999999999999998887 99
Q ss_pred EcccCcccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHH
Q 007088 449 LSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVE 527 (618)
Q Consensus 449 l~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~ 527 (618)
|+|||++....... . ..+|+.|+|||++.+ ..++.++||||||+++|||++|..|+..... ...
T Consensus 162 l~Dfg~~~~~~~~~----~----~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~-------~~~ 226 (289)
T 4fvq_A 162 LSDPGISITVLPKD----I----LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD-------SQR 226 (289)
T ss_dssp ECCCCSCTTTSCHH----H----HHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-------HHH
T ss_pred eccCcccccccCcc----c----cCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc-------hHH
Confidence 99999997653321 1 126889999999877 6789999999999999999996655543221 111
Q ss_pred HHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 528 WITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 528 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
............. .....+.+++.+||+.||++|||++|+++.|+++....
T Consensus 227 ~~~~~~~~~~~~~------------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 227 KLQFYEDRHQLPA------------PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp HHHHHHTTCCCCC------------CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred HHHHhhccCCCCC------------CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 1111111111110 11234667888999999999999999999999986543
No 130
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1e-41 Score=343.96 Aligned_cols=253 Identities=24% Similarity=0.382 Sum_probs=199.4
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeC-CeeEEEEeec
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK-KERLLVYSYL 383 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lV~e~~ 383 (618)
.++|++.+.||+|+||.||++.. +|+.||+|+++... ..+.+.+|++++++++||||+++++++.+. +..++||||+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 46788999999999999999987 48899999997653 456789999999999999999999997654 4789999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCC
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~ 463 (618)
++|+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++........
T Consensus 98 ~~~~L~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 172 (278)
T 1byg_A 98 AKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 172 (278)
T ss_dssp TTEEHHHHHHHHHH--HHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred CCCCHHHHHHhccc--ccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccccccc
Confidence 99999999865432 3488999999999999999999999 999999999999999999999999999976543211
Q ss_pred cccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
...+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .... .....
T Consensus 173 -------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-----~~~~---~~~~~------- 230 (278)
T 1byg_A 173 -------TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVP---RVEKG------- 230 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-----GHHH---HHTTT-------
T ss_pred -------CCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHH---HHhcC-------
Confidence 1236789999999988889999999999999999998 99999754321 1111 11111
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
............+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 231 ---~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 231 ---YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp ---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 00111122334677788899999999999999999999998754
No 131
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=349.71 Aligned_cols=265 Identities=20% Similarity=0.268 Sum_probs=203.1
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC-ccCHHHHHHHHHHHhcCCCCCccceeEEEEe----CCeeEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS-QHSEKEFLSEINTLGSVRHRNLVPLLGFCVA----KKERLL 378 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 378 (618)
.++|++.+.||+|+||.||++.. .+++.||+|++... ....+.+.+|++++++++||||+++++++.. ....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 46799999999999999999995 67899999988653 3445678999999999999999999999873 347789
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
||||+++|+|.+++.........+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999999876433335699999999999999999999999 9999999999999999999999999998765
Q ss_pred CCCCCccc-----ccccCCCCcccccCCCCCCCCC---CCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHH
Q 007088 459 NPVDTHLS-----TFVNGEFGDLGYVAPEYPRTLV---ATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWIT 530 (618)
Q Consensus 459 ~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~---~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~ 530 (618)
........ .......||+.|+|||++.+.. ++.++||||||+++|||++|+.||...... .........
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~ 261 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK---GDSVALAVQ 261 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT---TSCHHHHHH
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc---cchhhHHhh
Confidence 42111100 0011123689999999987554 689999999999999999999998531110 001111110
Q ss_pred HHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhh
Q 007088 531 LLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAE 588 (618)
Q Consensus 531 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 588 (618)
. .............+.+++.+||+.||.+|||+.|+++.|+.+..
T Consensus 262 ~-------------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 262 N-------------QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp C-------------C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred c-------------cCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 0 00001111223467778889999999999999999999998854
No 132
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=9.5e-42 Score=358.88 Aligned_cols=247 Identities=22% Similarity=0.310 Sum_probs=194.2
Q ss_pred CCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCCC
Q 007088 309 SKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLENG 386 (618)
Q Consensus 309 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 386 (618)
...+.||+|+||.||+|.. .+|+.||+|+++... ...+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 3357899999999999995 568999999997643 44567899999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee--CCCCceEEcccCcccccCCCCCc
Q 007088 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL--DGDFEPKLSDFGLARLMNPVDTH 464 (618)
Q Consensus 387 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll--~~~~~~kl~DfG~a~~~~~~~~~ 464 (618)
+|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++........
T Consensus 172 ~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~ 245 (373)
T 2x4f_A 172 ELFDRIIDES---YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL 245 (373)
T ss_dssp EEHHHHHHTG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBC
T ss_pred cHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccc
Confidence 9999886543 3589999999999999999999999 99999999999999 67789999999999876543221
Q ss_pred ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccc
Q 007088 465 LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDK 544 (618)
Q Consensus 465 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 544 (618)
....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+........... . ..
T Consensus 246 -----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--------~~~~~~i~~~~~~--~-~~ 309 (373)
T 2x4f_A 246 -----KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND--------AETLNNILACRWD--L-ED 309 (373)
T ss_dssp -----CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHHTCCC--S-CS
T ss_pred -----ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhccCC--C-Ch
Confidence 223489999999999988999999999999999999999999975432 1111111111100 0 00
Q ss_pred cccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 545 SLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 545 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. ........+.+++.+||+.||.+|||+.|+++
T Consensus 310 ~----~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 310 E----EFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp G----GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred h----hhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 01112345677777999999999999999986
No 133
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.5e-41 Score=343.20 Aligned_cols=257 Identities=19% Similarity=0.279 Sum_probs=202.9
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCC----CcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPG----GCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
.++|...+.||+|+||.||+|...+ +..||+|.++... ...+.+.+|+.++++++||||+++++++.+ +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4678889999999999999998532 3469999997642 345678999999999999999999999865 45789
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 90 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 163 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNK---NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYI 163 (281)
T ss_dssp EEECCTTCBHHHHHHHHT---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred EEecCCCCCHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccc
Confidence 999999999999996543 3589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
....... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ........ ...
T Consensus 164 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~-----~~~~~~~~---~~~ 232 (281)
T 3cc6_A 164 EDEDYYK---ASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK-----DVIGVLEK---GDR 232 (281)
T ss_dssp ------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG-----GHHHHHHH---TCC
T ss_pred ccccccc---cccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH-----HHHHHHhc---CCC
Confidence 5432211 112336789999999988889999999999999999998 99999754321 12221111 100
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
. .........+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 233 ~----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 233 L----------PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp C----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C----------CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 0 00111234577788899999999999999999999998653
No 134
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=9.2e-41 Score=337.11 Aligned_cols=246 Identities=23% Similarity=0.332 Sum_probs=199.2
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
.++|++.+.||+|+||.||+|.. .++..||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 46799999999999999999985 457899999986432 3456789999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 88 ~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS----KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp ECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred EecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 99999999999986543 489999999999999999999999 99999999999999999999999999986544
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
.... ....||+.|+|||.+.+..++.++||||||+++|+|++|+.||..... ...........
T Consensus 161 ~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~--- 223 (279)
T 3fdn_A 161 SSRR------TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRISRVE--- 223 (279)
T ss_dssp -------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHHTC---
T ss_pred cccc------cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH--------HHHHHHHHhCC---
Confidence 3221 123489999999999999999999999999999999999999975321 11111111110
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
. ..+......+.+++.+||+.||++|||++|+++.
T Consensus 224 ----~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 224 ----F----TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp ----C----CCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred ----C----CCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 0111123456677779999999999999999874
No 135
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.8e-41 Score=336.53 Aligned_cols=244 Identities=20% Similarity=0.298 Sum_probs=179.2
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|++.+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5799999999999999999994 578999999997532 34567899999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+ +++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 93 e~~-~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHTSS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred hhc-CCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 999 668888776543 489999999999999999999999 999999999999999999999999999986544
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVA-TPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
.... ....||+.|+|||.+.+..+ +.++||||||+++|||++|+.||..... ............
T Consensus 165 ~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~~~~~~~-- 229 (275)
T 2eue_A 165 GNFL-----KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI--------PVLFKNISNGVY-- 229 (275)
T ss_dssp ---------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCC--
T ss_pred cccc-----cCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCC--
Confidence 3221 22348999999999887765 7899999999999999999999975321 111111111100
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.........+.+++.+||+.||++|||++|+++
T Consensus 230 ---------~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 230 ---------TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ---------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---------CCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 001112345667778999999999999999975
No 136
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.2e-42 Score=360.26 Aligned_cols=248 Identities=23% Similarity=0.273 Sum_probs=190.9
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc----cCHHHHHHHHHH-HhcCCCCCccceeEEEEeCCeeEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ----HSEKEFLSEINT-LGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
.++|++.+.||+|+||.||+|+.. +++.||+|++++.. .....+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357999999999999999999964 58899999997643 233456677776 567899999999999999999999
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++..
T Consensus 117 v~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER----CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 999999999999987543 489999999999999999999999 9999999999999999999999999999864
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCcc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSL 538 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~ 538 (618)
...... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||...+. .+..........
T Consensus 190 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--------~~~~~~i~~~~~- 256 (373)
T 2r5t_A 190 IEHNST----TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--------AEMYDNILNKPL- 256 (373)
T ss_dssp BCCCCC----CCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH--------HHHHHHHHHSCC-
T ss_pred ccCCCc----cccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--------HHHHHHHHhccc-
Confidence 322211 1234589999999999999999999999999999999999999975322 111111111100
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.+. ... ...+.+++.+||+.||.+||++.+.++.
T Consensus 257 ------~~~-~~~---~~~~~~li~~lL~~dp~~R~~~~~~~~~ 290 (373)
T 2r5t_A 257 ------QLK-PNI---TNSARHLLEGLLQKDRTKRLGAKDDFME 290 (373)
T ss_dssp ------CCC-SSS---CHHHHHHHHHHTCSSGGGSTTTTTTHHH
T ss_pred ------CCC-CCC---CHHHHHHHHHHcccCHHhCCCCCCCHHH
Confidence 001 112 2356667779999999999998644433
No 137
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=347.37 Aligned_cols=263 Identities=22% Similarity=0.261 Sum_probs=197.3
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc------cCHHHHHHHHHHHhcCC---CCCccceeEEEEeC
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ------HSEKEFLSEINTLGSVR---HRNLVPLLGFCVAK 373 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 373 (618)
..++|++.+.||+|+||.||+|.. .+++.||+|++.... .....+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467899999999999999999994 678999999986322 22356778888777764 99999999999876
Q ss_pred C-----eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceE
Q 007088 374 K-----ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPK 448 (618)
Q Consensus 374 ~-----~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 448 (618)
. ..++||||+. |+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~k 160 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP--PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVK 160 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEE
Confidence 5 4789999997 599999876543 3489999999999999999999999 999999999999999999999
Q ss_pred EcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHH
Q 007088 449 LSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEW 528 (618)
Q Consensus 449 l~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~ 528 (618)
|+|||+++........ ....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .+...
T Consensus 161 l~Dfg~a~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~----~~~~i 231 (308)
T 3g33_A 161 LADFGLARIYSYQMAL-----TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD----QLGKI 231 (308)
T ss_dssp ECSCSCTTTSTTCCCS-----GGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH----HHHHH
T ss_pred EeeCccccccCCCccc-----CCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHH
Confidence 9999999876543222 12348999999999988999999999999999999999999997643211 11111
Q ss_pred HHHHhcC---Cccchh--ccccccCC--C-----CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 529 ITLLNTN---SSLETA--IDKSLLGN--G-----FDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 529 ~~~~~~~---~~~~~~--~d~~l~~~--~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
....... .+.... ........ . ..+....+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 232 FDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 1111100 000000 00000000 0 0112346677888999999999999999875
No 138
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=9e-41 Score=338.47 Aligned_cols=251 Identities=21% Similarity=0.268 Sum_probs=196.6
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
++|.+.+.||+|+||.||++.. .++..||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 5788899999999999999995 568999999986543 4567899999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee---CCCCceEEcccCcccccC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL---DGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfG~a~~~~ 459 (618)
+++|+|.+++.........+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 999999998865432235699999999999999999999999 99999999999999 456789999999998665
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
..... ....||+.|+|||.+. ..++.++||||||+++|||++|+.||..... ..............
T Consensus 179 ~~~~~-----~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~--------~~~~~~~~~~~~~~ 244 (285)
T 3is5_A 179 SDEHS-----TNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL--------EEVQQKATYKEPNY 244 (285)
T ss_dssp -------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCC
T ss_pred CcccC-----cCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH--------HHHHhhhccCCccc
Confidence 43221 2234899999999875 4688999999999999999999999975321 11111111111000
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. ..... ....+.+++.+||+.||++|||+.|+++
T Consensus 245 ~-----~~~~~---~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 245 A-----VECRP---LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp C-----C--CC---CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred c-----cccCc---CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 00001 2245667788999999999999999975
No 139
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.2e-41 Score=343.82 Aligned_cols=265 Identities=23% Similarity=0.288 Sum_probs=196.9
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCccC---HHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHS---EKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
++|++.+.||+|+||.||+|... +|+.||+|++...... .+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57899999999999999999964 5899999998654432 4567899999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~~~~l~~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 83 YCDHTVLHELDRYQR----GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp CCSEEHHHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred eCCCchHHHHHhhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 999999998876543 489999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcccc-------CHHHHHHHHh
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKG-------SLVEWITLLN 533 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~-------~l~~~~~~~~ 533 (618)
.... ....||+.|+|||.+.+ ..++.++||||||+++|||++|+.||......+.... ....+.....
T Consensus 156 ~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (311)
T 4agu_A 156 SDYY----DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFS 231 (311)
T ss_dssp --------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred cccc----CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccc
Confidence 2221 22348999999998865 6789999999999999999999999976432111000 0000000111
Q ss_pred cCCccchhccccccCCC-----CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 534 TNSSLETAIDKSLLGNG-----FDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 534 ~~~~~~~~~d~~l~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..........+...... .......+.+++.+||+.||++|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 232 TNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp TCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00000000000000000 0122345778888999999999999999975
No 140
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.2e-41 Score=347.47 Aligned_cols=261 Identities=22% Similarity=0.298 Sum_probs=195.2
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCe----
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKE---- 375 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 375 (618)
.++|++.+.||+|+||.||+|.. .+++.||+|+++... .....+.+|+.++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 45789999999999999999995 678999999997643 223568899999999999999999999877653
Q ss_pred eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcc
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLA 455 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 455 (618)
.++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred cEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 399999999999999987543 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcC
Q 007088 456 RLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN 535 (618)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~ 535 (618)
+......... .......||+.|+|||++.+..++.++||||||+++|||++|+.||..... ..........
T Consensus 164 ~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~--------~~~~~~~~~~ 234 (311)
T 3ork_A 164 RAIADSGNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP--------VSVAYQHVRE 234 (311)
T ss_dssp -------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHC
T ss_pred cccccccccc-ccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHhcC
Confidence 8765432211 112234489999999999998999999999999999999999999975332 1111111111
Q ss_pred CccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHH-HHHHHhhh
Q 007088 536 SSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVY-QLLRAIAE 588 (618)
Q Consensus 536 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl-~~L~~i~~ 588 (618)
.... +..... .....+.+++.+||+.||++||++.+++ ..+..+..
T Consensus 235 ~~~~----~~~~~~---~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 281 (311)
T 3ork_A 235 DPIP----PSARHE---GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281 (311)
T ss_dssp CCCC----HHHHST---TCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred CCCC----cccccC---CCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence 1100 000001 1234567778899999999999665554 55555533
No 141
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2e-40 Score=358.40 Aligned_cols=245 Identities=20% Similarity=0.342 Sum_probs=201.9
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|.+.+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56888999999999999999964 79999999996532 34567899999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 96 E~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 96 EYVSGGELFDYICKNG----RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp ECCSSEEHHHHTTSSS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred eCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 9999999999997643 499999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVA-TPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
... ....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||..... ...........
T Consensus 169 ~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~--------~~~~~~i~~~~--- 232 (476)
T 2y94_A 169 GEF-----LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV--------PTLFKKICDGI--- 232 (476)
T ss_dssp TCC-----BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS--------HHHHHHHHTTC---
T ss_pred ccc-----ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH--------HHHHHHHhcCC---
Confidence 321 223458999999999988765 6899999999999999999999975432 11111111110
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. ..+......+.+++.+||+.||.+|||++|+++
T Consensus 233 ------~--~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 233 ------F--YTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ------C--CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ------c--CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 0 001111235667777999999999999999986
No 142
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.1e-40 Score=335.78 Aligned_cols=252 Identities=24% Similarity=0.357 Sum_probs=202.3
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
.++|++.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467999999999999999999964 78999999986432 345678999999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+......
T Consensus 86 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 86 YCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp CCTTEEGGGGSBTTT----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred ecCCCcHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 999999999997543 489999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCcccccccCCCCcccccCCCCCCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVA-TPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
... .......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||....... .....|.. .....
T Consensus 159 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~---~~~~~-- 228 (276)
T 2yex_A 159 NRE--RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC---QEYSDWKE---KKTYL-- 228 (276)
T ss_dssp TEE--CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS---HHHHHHHT---TCTTS--
T ss_pred cch--hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH---HHHHHhhh---ccccc--
Confidence 211 11223458999999999887665 779999999999999999999997644321 11112211 00000
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.........+.+++.+||+.||++|||++|+++
T Consensus 229 --------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 229 --------NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp --------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --------CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 001122345667888999999999999999865
No 143
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=347.40 Aligned_cols=243 Identities=21% Similarity=0.245 Sum_probs=190.4
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCccC---HHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHS---EKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|+..++||+|+||+||+|... +++.||||++...... ...+..|+..+.++ +||||+++++++.+.+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57999999999999999999965 7999999998654322 33445566555555 8999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+ +++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 137 e~~-~~~L~~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWG---ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp ECC-CCBHHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred ecc-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 999 669988886543 3599999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
.... ....||+.|+|||++.+ .++.++|||||||++|||++|..|+.... .|... . .....
T Consensus 210 ~~~~-----~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----------~~~~~-~-~~~~~- 270 (311)
T 3p1a_A 210 AGAG-----EVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----------GWQQL-R-QGYLP- 270 (311)
T ss_dssp ----------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----------HHHHH-T-TTCCC-
T ss_pred CCCC-----cccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----------HHHHH-h-ccCCC-
Confidence 3221 12348999999998876 78999999999999999999987765311 11111 1 11100
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+.+. ......+.+++.+||+.||++|||++|+++
T Consensus 271 ---~~~~----~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 271 ---PEFT----AGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp ---HHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---cccc----cCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 0111 112346777888999999999999999975
No 144
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=353.75 Aligned_cols=251 Identities=20% Similarity=0.266 Sum_probs=194.0
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCcc---CHHHHHHHHHHHhcCCC--CCccceeEEEEeCCeeEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQH---SEKEFLSEINTLGSVRH--RNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lV 379 (618)
.++|++.+.||+|+||.||++...+++.||+|++..... ..+.+.+|+.++.+++| +||+++++++.+.+..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 356889999999999999999988899999999975432 34668899999999976 9999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|| +.+|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++...
T Consensus 88 ~e-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EC-CCSEEHHHHHHHSC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred Ee-CCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 99 45789999997643 489999999999999999999999 999999999999997 5789999999998765
Q ss_pred CCCCcccccccCCCCcccccCCCCCCC-----------CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHH
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRT-----------LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEW 528 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~ 528 (618)
...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .....
T Consensus 159 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~ 230 (343)
T 3dbq_A 159 PDTTSV--VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------QISKL 230 (343)
T ss_dssp -------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS------HHHHH
T ss_pred cccccc--cCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh------HHHHH
Confidence 432211 1123458999999998754 6788999999999999999999999975321 11111
Q ss_pred HHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 529 ITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 529 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
. ... ++.............+.+++.+||+.||.+|||+.|+++.
T Consensus 231 ~-~~~---------~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 231 H-AII---------DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp H-HHH---------CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred H-HHh---------cCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1 111 1111111111122456778889999999999999999864
No 145
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.5e-41 Score=340.96 Aligned_cols=250 Identities=20% Similarity=0.271 Sum_probs=201.6
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCcc---CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQH---SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
.++|++.+.||+|+||.||+|.. .+++.||+|++..... ..+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 46899999999999999999995 4689999999965432 3456889999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCc---eEEcccCcccc
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE---PKLSDFGLARL 457 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DfG~a~~ 457 (618)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||.+..
T Consensus 85 e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE----FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp CCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred ecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 9999999988886543 489999999999999999999999 9999999999999986655 99999999987
Q ss_pred cCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 458 MNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 458 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
....... ....||+.|+|||.+.+..++.++||||||+++|+|++|+.||..... ............
T Consensus 158 ~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--------~~~~~~~~~~~~ 224 (284)
T 3kk8_A 158 VNDSEAW-----HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--------HRLYAQIKAGAY 224 (284)
T ss_dssp CCSSCBC-----CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCC
T ss_pred cccCccc-----cCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch--------hHHHHHHHhccc
Confidence 6543221 223489999999999999999999999999999999999999975322 111111111100
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. ............+.+++.+||+.||++|||+.|+++
T Consensus 225 ~-------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 225 D-------YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp C-------CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred c-------CCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0 000011122345677778999999999999999986
No 146
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.3e-40 Score=339.48 Aligned_cols=260 Identities=20% Similarity=0.234 Sum_probs=198.3
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCcc----CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQH----SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
.++|.+.+.||+|+||.||+|.. .+++.||+|++..... ..+.+.+|+.++++++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 47899999999999999999996 4789999999975432 236788999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 113 ~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG----PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EECCCCEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEecCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 99999999999987543 489999999999999999999999 99999999999999999999999999998665
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
..... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ..............
T Consensus 186 ~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~~~~~~~~~ 254 (309)
T 2h34_A 186 DEKLT---QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL--------SVMGAHINQAIPRP 254 (309)
T ss_dssp --------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH--------HHHHHHHHSCCCCG
T ss_pred ccccc---cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH--------HHHHHHhccCCCCc
Confidence 43211 11233489999999999999999999999999999999999999975321 11111111111100
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHhhhhc
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERH-TMFEVYQLLRAIAERY 590 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~i~~~~ 590 (618)
... .......+.+++.+||+.||++|| +++++++.|+++.+..
T Consensus 255 ~~~--------~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 255 STV--------RPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp GGT--------STTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred ccc--------CCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 000 111223566777799999999999 9999999999876544
No 147
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=5.2e-41 Score=362.18 Aligned_cols=247 Identities=20% Similarity=0.234 Sum_probs=192.9
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC----ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS----QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
.++|++.+.||+|+||.||+|.. .+|+.||+|+++.. ......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 46799999999999999999995 56899999999753 23345678899999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHH-NCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
|||+++|+|.+++.... .+++..+..++.||+.||+|||+ . +|+||||||+|||++.++.+||+|||+++..
T Consensus 227 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 99999999999986543 48999999999999999999998 8 9999999999999999999999999999864
Q ss_pred CCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCcc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSL 538 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~ 538 (618)
...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ............
T Consensus 300 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~~i~~~~~- 366 (446)
T 4ejn_A 300 IKDGAT----MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------EKLFELILMEEI- 366 (446)
T ss_dssp CC---------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCC-
T ss_pred cCCCcc----cccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--------HHHHHHHHhCCC-
Confidence 332221 2234589999999999999999999999999999999999999975332 111111111110
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERH-----TMFEVYQ 581 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 581 (618)
. .+......+.+++.+||+.||.+|| +++|+++
T Consensus 367 ------~----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 367 ------R----FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp ------C----CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ------C----CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 0 0111224566777799999999999 9999875
No 148
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=5.7e-42 Score=355.16 Aligned_cols=264 Identities=22% Similarity=0.309 Sum_probs=209.0
Q ss_pred hhccCCCCcEEeecCCeeEEEEEeCC------CcEEEEEEeccCc--cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCC
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAMLPG------GCFIMIKRLEDSQ--HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKK 374 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 374 (618)
..++|...+.||+|+||.||+|.... ...||+|.+.... ...+.+.+|+.+++++ +||||+++++++.+.+
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 45789999999999999999999532 2489999997643 3356789999999999 8999999999999999
Q ss_pred eeEEEEeecCCCccccccCCCCC----------CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEH----------EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD 444 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 444 (618)
..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCC
Confidence 99999999999999999864321 123589999999999999999999999 99999999999999999
Q ss_pred CceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCcccc
Q 007088 445 FEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKG 523 (618)
Q Consensus 445 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~ 523 (618)
+.+||+|||+++......... ......+|+.|+|||.+.+..++.++||||||+++|||++ |..||.......
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---- 274 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYI--VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS---- 274 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSE--ECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH----
T ss_pred CeEEECcccccccccccccee--ecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH----
Confidence 999999999998654322211 1122336789999999988889999999999999999999 999997543211
Q ss_pred CHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 524 SLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 524 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
.......... ...........+.+++.+||+.||.+|||+.|+++.|+++.++
T Consensus 275 ~~~~~~~~~~-------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 275 KFYKLVKDGY-------------QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp HHHHHHHHTC-------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC-------------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 1111111100 0001111234677788899999999999999999999998765
No 149
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3.1e-40 Score=340.43 Aligned_cols=250 Identities=21% Similarity=0.275 Sum_probs=202.8
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc-------cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ-------HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 376 (618)
.++|++.+.||+|+||.||+|... +|+.||+|+++... ...+.+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 457899999999999999999964 68999999996532 2467899999999999999999999999999999
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC----ceEEccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF----EPKLSDF 452 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Df 452 (618)
++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS----CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 99999999999999997543 489999999999999999999999 999999999999999888 7999999
Q ss_pred CcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHH
Q 007088 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLL 532 (618)
Q Consensus 453 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~ 532 (618)
|++......... ....||+.|+|||.+.+..++.++||||||+++|||++|+.||..... .+.....
T Consensus 164 g~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~i 230 (321)
T 2a2a_A 164 GLAHEIEDGVEF-----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--------QETLANI 230 (321)
T ss_dssp TTCEECCTTCCC-----CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHHH
T ss_pred ccceecCccccc-----cccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHH
Confidence 999876543221 233489999999999999999999999999999999999999975321 1111111
Q ss_pred hcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 533 NTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 533 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..... ..++... ......+.+++.+||+.||++|||+.|+++
T Consensus 231 ~~~~~---~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 231 TSVSY---DFDEEFF----SHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HTTCC---CCCHHHH----TTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred Hhccc---ccChhhh----cccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11100 0000000 012245677788999999999999999976
No 150
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.1e-41 Score=351.19 Aligned_cols=242 Identities=22% Similarity=0.298 Sum_probs=199.4
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCcc---------CHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQH---------SEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 373 (618)
..++|++.+.||+|+||.||+|.. .+++.||+|+++.... ..+.+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 456899999999999999999994 6789999999975431 233577899999999999999999999999
Q ss_pred CeeEEEEeecCCC-ccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEccc
Q 007088 374 KERLLVYSYLENG-TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDF 452 (618)
Q Consensus 374 ~~~~lV~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 452 (618)
+..++||||+.+| +|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP----RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeec
Confidence 9999999999777 9999987654 499999999999999999999999 9999999999999999999999999
Q ss_pred CcccccCCCCCcccccccCCCCcccccCCCCCCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHH
Q 007088 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVA-TPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITL 531 (618)
Q Consensus 453 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~ 531 (618)
|+++......... ...||+.|+|||++.+..+ +.++|||||||++|||++|+.||......
T Consensus 175 g~a~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------- 236 (335)
T 3dls_A 175 GSAAYLERGKLFY-----TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------- 236 (335)
T ss_dssp TTCEECCTTCCBC-----EECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------------
T ss_pred ccceECCCCCcee-----ccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------------
Confidence 9998765433221 2348999999999888776 78999999999999999999999642110
Q ss_pred HhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 532 LNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 532 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
....... .......+.+++.+||+.||++|||++|+++.
T Consensus 237 ----------~~~~~~~--~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 ----------VEAAIHP--PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ----------TTTCCCC--SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ----------HhhccCC--CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000 01122356777779999999999999999763
No 151
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=6.7e-41 Score=366.27 Aligned_cols=250 Identities=21% Similarity=0.258 Sum_probs=203.0
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
.++|...+.||+|+||.||+|+. .+|+.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 46788999999999999999996 469999999996532 3456788999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++|+|.+++.........+++..++.++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999999876544345699999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
...... ...+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..............
T Consensus 341 ~~~~~~----~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~----~~~~~~~~i~~~~~-- 410 (543)
T 3c4z_A 341 AGQTKT----KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV----ENKELKQRVLEQAV-- 410 (543)
T ss_dssp TTCCCB----CCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC----CHHHHHHHHHHCCC--
T ss_pred CCCccc----ccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch----hHHHHHHHHhhccc--
Confidence 433221 22359999999999999999999999999999999999999998653221 11222221111100
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTM 576 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 576 (618)
..+......+.+++.+||+.||++||++
T Consensus 411 ---------~~p~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 411 ---------TYPDKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp ---------CCCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred ---------CCCcccCHHHHHHHHHhccCCHhHCCCC
Confidence 0111223456667779999999999975
No 152
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=6.1e-41 Score=346.69 Aligned_cols=262 Identities=19% Similarity=0.236 Sum_probs=205.5
Q ss_pred ccCHHHHHHhhccCCCC-cEEeecCCeeEEEEEeC-CCcEEEEEEeccC---ccCHHHHHHHHHHHhcC-CCCCccceeE
Q 007088 295 KMRLSDLMKATNSFSKN-NIIGTGRTGATYIAMLP-GGCFIMIKRLEDS---QHSEKEFLSEINTLGSV-RHRNLVPLLG 368 (618)
Q Consensus 295 ~~~~~~l~~~~~~y~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~ 368 (618)
...+.......++|.+. +.||+|+||.||+|... +++.||+|+++.. ......+.+|+.++.++ +||||+++++
T Consensus 17 n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~ 96 (327)
T 3lm5_A 17 NLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96 (327)
T ss_dssp CCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred hhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEE
Confidence 34445555666778877 88999999999999954 6899999999753 24467899999999999 4699999999
Q ss_pred EEEeCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC---CC
Q 007088 369 FCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG---DF 445 (618)
Q Consensus 369 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~ 445 (618)
++.+.+..++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++. ++
T Consensus 97 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~ 171 (327)
T 3lm5_A 97 VYENTSEIILILEYAAGGEIFSLCLPELA--EMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLG 171 (327)
T ss_dssp EEECSSEEEEEEECCTTEEGGGGGSSCC---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBC
T ss_pred EEEeCCeEEEEEEecCCCcHHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCC
Confidence 99999999999999999999999865433 4599999999999999999999999 9999999999999987 78
Q ss_pred ceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCH
Q 007088 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSL 525 (618)
Q Consensus 446 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l 525 (618)
.+||+|||+++........ ....||+.|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 172 ~~kL~Dfg~a~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------- 239 (327)
T 3lm5_A 172 DIKIVDFGMSRKIGHACEL-----REIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ------- 239 (327)
T ss_dssp CEEECCGGGCEEC--------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------
T ss_pred cEEEeeCccccccCCcccc-----ccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch-------
Confidence 9999999999876543221 2234899999999999999999999999999999999999999753321
Q ss_pred HHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 526 VEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 526 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+......... ..............+.+++.+||+.||++|||++|+++
T Consensus 240 -~~~~~i~~~~-------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 240 -ETYLNISQVN-------VDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp -HHHHHHHHTC-------CCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -HHHHHHHhcc-------cccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 1111111100 00011111223345777888999999999999999865
No 153
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=4.9e-41 Score=350.05 Aligned_cols=268 Identities=16% Similarity=0.185 Sum_probs=198.8
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC----CCcEEEEEEeccCcc------------CHHHHHHHHHHHhcCCCCCccceeE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP----GGCFIMIKRLEDSQH------------SEKEFLSEINTLGSVRHRNLVPLLG 368 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~------------~~~~~~~E~~~l~~l~h~niv~l~~ 368 (618)
.++|.+.+.||+|+||.||+|... ++..||+|++..... ....+.+|+..+..++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 367999999999999999999965 578999999865431 1234667888999999999999999
Q ss_pred EEEe----CCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC
Q 007088 369 FCVA----KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD 444 (618)
Q Consensus 369 ~~~~----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 444 (618)
++.. ....++||||+ +++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+|||++.+
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG----TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYK 187 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccC
Confidence 9988 67889999999 999999997654 599999999999999999999999 99999999999999887
Q ss_pred C--ceEEcccCcccccCCCCCc---ccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCC
Q 007088 445 F--EPKLSDFGLARLMNPVDTH---LSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPE 519 (618)
Q Consensus 445 ~--~~kl~DfG~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~ 519 (618)
+ .+||+|||+++........ .........||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~ 267 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP 267 (345)
T ss_dssp STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH
T ss_pred CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc
Confidence 7 9999999999876432211 1111233458999999999999899999999999999999999999996422111
Q ss_pred ccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhh
Q 007088 520 SFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAE 588 (618)
Q Consensus 520 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 588 (618)
. ............ ....+....... .....+.+++.+||+.||++||++++|++.|+++..
T Consensus 268 ~---~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 268 V---AVQTAKTNLLDE--LPQSVLKWAPSG---SSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp H---HHHHHHHHHHHT--TTHHHHHHSCTT---SCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred H---HHHHHHHhhccc--ccHHHHhhcccc---ccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 0 111111111100 011111111100 123467777779999999999999999999988643
No 154
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.5e-41 Score=341.71 Aligned_cols=252 Identities=21% Similarity=0.315 Sum_probs=203.5
Q ss_pred hhccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEe----------
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA---------- 372 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------- 372 (618)
..++|+..+.||+|+||.||+|... +++.||+|+++... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 3457899999999999999999965 78999999997643 356789999999999999999999864
Q ss_pred ------CCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCc
Q 007088 373 ------KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446 (618)
Q Consensus 373 ------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 446 (618)
....++||||+++|+|.+++..... ..+++..++.++.|++.||.|||+. +|+||||||+||+++.++.
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 160 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG--EKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQ 160 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGG--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCC
Confidence 3457899999999999999965432 4589999999999999999999999 9999999999999999999
Q ss_pred eEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHH
Q 007088 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLV 526 (618)
Q Consensus 447 ~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~ 526 (618)
+||+|||++......... ....||+.|+|||.+.+..++.++||||||+++|||++|..|+... .
T Consensus 161 ~kl~Dfg~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----------~ 225 (284)
T 2a19_B 161 VKIGDFGLVTSLKNDGKR-----TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----------S 225 (284)
T ss_dssp EEECCCTTCEESSCCSCC-----CCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----------H
T ss_pred EEECcchhheeccccccc-----cccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----------H
Confidence 999999999876543221 1234899999999998889999999999999999999999886421 1
Q ss_pred HHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcC
Q 007088 527 EWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYH 591 (618)
Q Consensus 527 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (618)
....... ... + .... ...+.+++.+||+.||.+|||+.|+++.|+.+.+...
T Consensus 226 ~~~~~~~-~~~--------~-~~~~---~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 226 KFFTDLR-DGI--------I-SDIF---DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp HHHHHHH-TTC--------C-CTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred HHHHHhh-ccc--------c-cccC---CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 1111111 111 1 1112 2346677779999999999999999999999876543
No 155
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=350.04 Aligned_cols=257 Identities=13% Similarity=0.107 Sum_probs=205.5
Q ss_pred hhccCCCCcEEeecCCeeEEEEE------eCCCcEEEEEEeccCccCHHHHHHHHHHHhcCC---CCCccceeEEEEeCC
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAM------LPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR---HRNLVPLLGFCVAKK 374 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~ 374 (618)
..++|.+.++||+|+||.||+|. ..+++.||+|+++.. ...++..|++++.+++ |+||+++++++...+
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 35679999999999999999994 456899999999764 4567888888888886 999999999999999
Q ss_pred eeEEEEeecCCCccccccCCCCC-CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC----------
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEH-EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG---------- 443 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---------- 443 (618)
..++||||+++|+|.+++..... ....+++..++.|+.||+.||+|||++ +|+||||||+|||++.
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~ 217 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDD 217 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC-----
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccccc
Confidence 99999999999999999964221 124599999999999999999999999 9999999999999998
Q ss_pred -CCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccc
Q 007088 444 -DFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522 (618)
Q Consensus 444 -~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~ 522 (618)
++.+||+|||+++.+..... ........||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 218 ~~~~~kl~DFG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~--- 292 (365)
T 3e7e_A 218 LSAGLALIDLGQSIDMKLFPK--GTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE--- 292 (365)
T ss_dssp -CTTEEECCCTTCEEGGGSCT--TEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE---
T ss_pred ccCCEEEeeCchhhhhhccCC--CceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc---
Confidence 89999999999976542211 112234569999999999999999999999999999999999999986432210
Q ss_pred cCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCC-CCHHHHHHHHHHhhhhc
Q 007088 523 GSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKER-HTMFEVYQLLRAIAERY 590 (618)
Q Consensus 523 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~R-Ps~~evl~~L~~i~~~~ 590 (618)
..+...+......+ .+.+++..|++.+|.+| |+++++.+.|+++.++.
T Consensus 293 -----------------~~~~~~~~~~~~~~---~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 293 -----------------CKPEGLFRRLPHLD---MWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp -----------------EEECSCCTTCSSHH---HHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred -----------------eeechhccccCcHH---HHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 00111111111233 44556669999999999 68999999999887764
No 156
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=361.53 Aligned_cols=262 Identities=19% Similarity=0.182 Sum_probs=204.2
Q ss_pred cCHHHHHHhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEE
Q 007088 296 MRLSDLMKATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFC 370 (618)
Q Consensus 296 ~~~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~ 370 (618)
+++.+.....++|++.+.||+|+||.||+++. .+|+.||+|++++.. ...+.+.+|..++.+++||||+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 34556666788999999999999999999996 478999999996532 2233478999999999999999999999
Q ss_pred EeCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEc
Q 007088 371 VAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLS 450 (618)
Q Consensus 371 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 450 (618)
.+.+..|+||||+++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++++||+
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~ 204 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKFG---ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLA 204 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHHS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEe
Confidence 99999999999999999999997543 3589999999999999999999999 99999999999999999999999
Q ss_pred ccCcccccCCCCCcccccccCCCCcccccCCCCCC-------CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcccc
Q 007088 451 DFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR-------TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKG 523 (618)
Q Consensus 451 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~ 523 (618)
|||+++......... ....+||+.|+|||++. +..++.++|||||||++|||++|+.||...+..
T Consensus 205 DFGla~~~~~~~~~~---~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~----- 276 (412)
T 2vd5_A 205 DFGSCLKLRADGTVR---SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA----- 276 (412)
T ss_dssp CCTTCEECCTTSCEE---CSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----
T ss_pred echhheeccCCCccc---cceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH-----
Confidence 999998765433211 12345999999999886 457899999999999999999999999764321
Q ss_pred CHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCC---CCHHHHHH
Q 007088 524 SLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKER---HTMFEVYQ 581 (618)
Q Consensus 524 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~ 581 (618)
+......... .....+.. .... ...+.+++.+||. +|.+| |+++|+++
T Consensus 277 ---~~~~~i~~~~--~~~~~p~~-~~~~---s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 277 ---ETYGKIVHYK--EHLSLPLV-DEGV---PEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp ---HHHHHHHTHH--HHCCCC-----CC---CHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred ---HHHHHHHhcc--cCcCCCcc-ccCC---CHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 1111111000 00000000 0112 2356667779999 99998 58888854
No 157
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.1e-41 Score=347.07 Aligned_cols=270 Identities=22% Similarity=0.323 Sum_probs=208.4
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-----CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCC--ee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-----PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK--ER 376 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~ 376 (618)
.++|++.+.||+|+||.||++.. .+++.||+|++.... ...+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 35688899999999999999983 468999999997643 34567899999999999999999999987654 67
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTK 193 (326)
T ss_dssp EEEECCCTTCBHHHHHHHST---TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEECCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchh
Confidence 99999999999999997653 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCC-------CccccCHHHHH
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAP-------ESFKGSLVEWI 529 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~-------~~~~~~l~~~~ 529 (618)
......... .......++..|+|||.+.+..++.++||||||+++|||++|+.|+...... ...........
T Consensus 194 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (326)
T 2w1i_A 194 VLPQDKEYY-KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 272 (326)
T ss_dssp ECCSSCSEE-ECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred hcccccccc-ccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHH
Confidence 765433211 1112234678899999998888999999999999999999999987632100 00000000000
Q ss_pred HHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 530 TLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 530 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
.. .+...............+.+++.+||+.||++|||+.|+++.|+++.++.
T Consensus 273 ~~---------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l 324 (326)
T 2w1i_A 273 IE---------LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324 (326)
T ss_dssp HH---------HHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HH---------HhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 00 11110011112223456777888999999999999999999999998753
No 158
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.8e-41 Score=356.59 Aligned_cols=250 Identities=20% Similarity=0.263 Sum_probs=194.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCC--CCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVR--HRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|++.+.||+|+||.||++...+++.||||++.... ...+.+.+|+.++.+++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4699999999999999999998889999999996543 33467899999999996 599999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
| +.+++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++....
T Consensus 136 E-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp E-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred e-cCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 9 56789999987643 489999999999999999999999 999999999999996 57899999999987654
Q ss_pred CCCcccccccCCCCcccccCCCCCCC-----------CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHH
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRT-----------LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWI 529 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~ 529 (618)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .....
T Consensus 207 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-------~~~~~ 277 (390)
T 2zmd_A 207 DTTSV--VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-------QISKL 277 (390)
T ss_dssp ---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-------HHHHH
T ss_pred CCccc--cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-------HHHHH
Confidence 32211 1223458999999998754 4688999999999999999999999975321 11111
Q ss_pred HHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 530 TLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 530 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
..... ..............+.+++.+||+.||++|||+.|+++.
T Consensus 278 ~~~~~---------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 278 HAIID---------PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHHHC---------TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhC---------ccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 11111 111111111113456778889999999999999999864
No 159
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=3.5e-41 Score=351.28 Aligned_cols=246 Identities=26% Similarity=0.361 Sum_probs=197.5
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
.+.|+..+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 35688899999999999999995 678999999996543 2235688999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||++ |+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 133 ~e~~~-g~l~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205 (348)
T ss_dssp EECCS-EEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred EecCC-CCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence 99997 58888775432 3589999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCcccccccCCCCcccccCCCCC---CCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYP---RTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~ 536 (618)
... ...||+.|+|||++ .+..++.++|||||||++|||++|+.||..... ...........
T Consensus 206 ~~~--------~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~--------~~~~~~~~~~~ 269 (348)
T 1u5q_A 206 PAN--------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--------MSALYHIAQNE 269 (348)
T ss_dssp SBC--------CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHHSC
T ss_pred CCC--------cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHHhcC
Confidence 321 23489999999987 356789999999999999999999999975321 11111111111
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 537 SLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 537 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.+....... ...+.+++.+||+.||++|||++|+++.
T Consensus 270 ------~~~~~~~~~---~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 270 ------SPALQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp ------CCCCCCTTS---CHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred ------CCCCCCCCC---CHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 111111122 2346677779999999999999999763
No 160
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=4.6e-40 Score=331.56 Aligned_cols=248 Identities=22% Similarity=0.295 Sum_probs=200.9
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccC-ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDS-QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
.++|++.+.||+|+||.||+|... ++..||+|++... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 467999999999999999999964 5789999998654 34567899999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee---CCCCceEEcccCcccccC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL---DGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfG~a~~~~ 459 (618)
+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++....
T Consensus 88 ~~~~~L~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~ 160 (277)
T 3f3z_A 88 CTGGELFERVVHKR----VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160 (277)
T ss_dssp CCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred cCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence 99999999886543 489999999999999999999999 99999999999999 788999999999998765
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC-cc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS-SL 538 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~-~~ 538 (618)
..... ....||+.|+|||.+.+. ++.++||||||+++|||++|+.||..... .+......... ..
T Consensus 161 ~~~~~-----~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~ 226 (277)
T 3f3z_A 161 PGKMM-----RTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTD--------SEVMLKIREGTFTF 226 (277)
T ss_dssp TTSCB-----CCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCC
T ss_pred Cccch-----hccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhCCCCC
Confidence 43321 223489999999988664 89999999999999999999999975332 11111111110 00
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.... .......+.+++.+||+.||++|||+.|+++
T Consensus 227 ~~~~--------~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 227 PEKD--------WLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp CHHH--------HTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred Cchh--------hhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 0012346777888999999999999999975
No 161
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=7.4e-41 Score=366.80 Aligned_cols=252 Identities=25% Similarity=0.304 Sum_probs=204.5
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC----ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS----QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
.++|+..+.||+|+||.||+|.. .+|+.||+|++... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 46789999999999999999996 47899999999653 24456788999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++|+|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++...
T Consensus 263 mEy~~gg~L~~~l~~~~~--~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQ--AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp ECCCCSCBHHHHHHSSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEcCCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 999999999999876543 4589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .............
T Consensus 338 ~~~~-----~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~----~~~~i~~~i~~~~--- 405 (576)
T 2acx_A 338 EGQT-----IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI----KREEVERLVKEVP--- 405 (576)
T ss_dssp TTCC-----EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC----CHHHHHHHHHHCC---
T ss_pred cCcc-----ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch----hHHHHHHHhhccc---
Confidence 4322 123459999999999999999999999999999999999999998643221 1111111111110
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERH-----TMFEVYQ 581 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 581 (618)
.. ........+.+++.+||+.||.+|| +++|+++
T Consensus 406 ----~~----~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 406 ----EE----YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp ----CC----CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ----cc----CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 00 1111224566777799999999999 7788764
No 162
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=4.4e-41 Score=349.55 Aligned_cols=252 Identities=19% Similarity=0.258 Sum_probs=198.2
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEEEe
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e 381 (618)
..++|++.+.||+|+||.||++.. .+++.||+|++...... ..+|++++.++ +||||+++++++.+.+..|+|||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD---PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC---CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC---hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 356799999999999999999996 46899999999765432 34688888887 79999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC----CceEEcccCcccc
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD----FEPKLSDFGLARL 457 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----~~~kl~DfG~a~~ 457 (618)
|+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||+.++ +.+||+|||+++.
T Consensus 97 ~~~gg~L~~~i~~~~----~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~ 169 (342)
T 2qr7_A 97 LMKGGELLDKILRQK----FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ 169 (342)
T ss_dssp CCCSCBHHHHHHTCT----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred CCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence 999999999987553 489999999999999999999999 99999999999998433 3599999999987
Q ss_pred cCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 458 MNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 458 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....+..........
T Consensus 170 ~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~~~~i~~~~~ 240 (342)
T 2qr7_A 170 LRAENGL----LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD-----DTPEEILARIGSGKF 240 (342)
T ss_dssp CBCTTCC----BCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT-----SCHHHHHHHHHHCCC
T ss_pred CcCCCCc----eeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc-----CCHHHHHHHHccCCc
Confidence 6543221 1234589999999999888889999999999999999999999975322 122222222211110
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+....+......+.+++.+||+.||++||++.|+++
T Consensus 241 -------~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 241 -------SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp -------CCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -------ccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0111111223345667777999999999999999975
No 163
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.2e-40 Score=356.25 Aligned_cols=251 Identities=20% Similarity=0.298 Sum_probs=191.0
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---------cCHHHHHHHHHHHhcCCCCCccceeEEEEeC
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---------HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK 373 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 373 (618)
..++|.+.+.||+|+||.||+|.. .+++.||+|++.... .....+.+|++++++++||||+++++++. .
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~ 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-A 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-S
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-c
Confidence 467899999999999999999995 568999999986532 11224789999999999999999999975 4
Q ss_pred CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC---ceEEc
Q 007088 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF---EPKLS 450 (618)
Q Consensus 374 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~ 450 (618)
+..++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred CceEEEEEcCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEe
Confidence 56799999999999999987654 499999999999999999999999 999999999999997544 59999
Q ss_pred ccCcccccCCCCCcccccccCCCCcccccCCCCCCC---CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHH
Q 007088 451 DFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT---LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVE 527 (618)
Q Consensus 451 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~ 527 (618)
|||+++....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .+..
T Consensus 285 DFG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~----~~~~ 355 (419)
T 3i6u_A 285 DFGHSKILGETSL-----MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV----SLKD 355 (419)
T ss_dssp CSSTTTSCC----------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC----CHHH
T ss_pred ecccceecCCCcc-----ccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH----HHHH
Confidence 9999987654221 123348999999999853 567889999999999999999999997543321 2222
Q ss_pred HHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 528 WITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 528 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
...... ... .+.. .......+.+++.+||+.||++|||++|+++
T Consensus 356 ~i~~~~--~~~----~~~~----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 356 QITSGK--YNF----IPEV----WAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHHTTC--CCC----CHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHhcCC--CCC----Cchh----hcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 111100 000 0000 0112346777888999999999999999976
No 164
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=7.9e-40 Score=330.81 Aligned_cols=257 Identities=22% Similarity=0.308 Sum_probs=204.2
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc-------cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ-------HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERL 377 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 377 (618)
++|++.+.||+|+||.||++... +++.||+|+++... ...+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 56889999999999999999965 68999999986532 24678999999999999999999999999999999
Q ss_pred EEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC----ceEEcccC
Q 007088 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF----EPKLSDFG 453 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~DfG 453 (618)
+||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 85 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK----ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEeecCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 999999999999998653 3489999999999999999999999 999999999999998877 89999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHh
Q 007088 454 LARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLN 533 (618)
Q Consensus 454 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~ 533 (618)
.+......... ....|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... .+......
T Consensus 158 ~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~ 224 (283)
T 3bhy_A 158 IAHKIEAGNEF-----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK--------QETLTNIS 224 (283)
T ss_dssp TCEECC-------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHH
T ss_pred cceeccCCCcc-----cccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch--------HHHHHHhH
Confidence 99876543221 223489999999999989999999999999999999999999975321 11111111
Q ss_pred cCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHHhhhh
Q 007088 534 TNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ--LLRAIAER 589 (618)
Q Consensus 534 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i~~~ 589 (618)
..... .+.... ......+.+++.+||+.||++|||+.|+++ .++++..+
T Consensus 225 ~~~~~---~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 275 (283)
T 3bhy_A 225 AVNYD---FDEEYF----SNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR 275 (283)
T ss_dssp TTCCC---CCHHHH----TTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred hcccC---Ccchhc----ccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHH
Confidence 11000 000000 112345677888999999999999999997 56666544
No 165
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=4.1e-40 Score=356.16 Aligned_cols=258 Identities=21% Similarity=0.245 Sum_probs=193.6
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC---ccCHHHHHHHHHHHhcCCCCCccceeEEEEeC------C
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS---QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK------K 374 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 374 (618)
.++|++.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|+.++++++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 56899999999999999999984 56899999999753 23456788999999999999999999999655 3
Q ss_pred eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCc
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGL 454 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 454 (618)
+.|+||||+++ +|.+.+.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEEeCCCC-CHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 56999999976 56666642 388999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHH--
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLL-- 532 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~-- 532 (618)
++....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...+..+ .+.......
T Consensus 211 a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~----~~~~i~~~lg~ 281 (464)
T 3ttj_A 211 ARTAGTSFM-----MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID----QWNKVIEQLGT 281 (464)
T ss_dssp C-----CCC-----C----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHHCS
T ss_pred eeecCCCcc-----cCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHhcCC
Confidence 987654221 123458999999999999999999999999999999999999997643211 111111000
Q ss_pred ----------------hcC-Cc-----cchhccccccCCCC---HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 533 ----------------NTN-SS-----LETAIDKSLLGNGF---DGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 533 ----------------~~~-~~-----~~~~~d~~l~~~~~---~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
... .. ....+...+..... ......+.+++.+||+.||++|||++|+++
T Consensus 282 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 282 PCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp CCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 00 00000111100000 112456888999999999999999999976
No 166
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=3.7e-41 Score=346.33 Aligned_cols=262 Identities=19% Similarity=0.275 Sum_probs=195.1
Q ss_pred ccCCCC-cEEeecCCeeEEEEE-eCCCcEEEEEEeccCc-cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEEEe
Q 007088 306 NSFSKN-NIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 306 ~~y~~~-~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e 381 (618)
+.|.+. +.||+|+||.||+|. ..+++.||||++.... ...+.+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 467764 789999999999999 4578999999996543 4567899999999885 79999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCc---eEEcccCccccc
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE---PKLSDFGLARLM 458 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DfG~a~~~ 458 (618)
|+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||++...
T Consensus 92 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~ 164 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR----HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI 164 (316)
T ss_dssp CCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred cCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence 999999999997543 489999999999999999999999 9999999999999998776 999999999765
Q ss_pred CCCCCc---ccccccCCCCcccccCCCCCCC-----CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccC------
Q 007088 459 NPVDTH---LSTFVNGEFGDLGYVAPEYPRT-----LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGS------ 524 (618)
Q Consensus 459 ~~~~~~---~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~------ 524 (618)
...... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+.....
T Consensus 165 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 244 (316)
T 2ac3_A 165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA 244 (316)
T ss_dssp -----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHH
T ss_pred ccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchh
Confidence 432111 0111123458999999998764 56889999999999999999999999865432211100
Q ss_pred -HHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 525 -LVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 525 -l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
............. ...... .......+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~i~~~~~--~~~~~~-----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 245 CQNMLFESIQEGKY--EFPDKD-----WAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHHHCCC--CCCHHH-----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHHhccCc--ccCchh-----cccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 0011111111100 000000 0012345777888999999999999999976
No 167
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.3e-41 Score=343.16 Aligned_cols=255 Identities=22% Similarity=0.296 Sum_probs=200.8
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEe--CCeeEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVA--KKERLL 378 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 378 (618)
.++|++.+.||+|+||.||++.. .+++.||+|++.... ...+.+.+|++++++++||||+++++++.+ .+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 46789999999999999999996 478999999997543 334568899999999999999999998854 567899
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCC-----ceecCCCCCCeeeCCCCceEEcccC
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR-----IIHRNISSKCILLDGDFEPKLSDFG 453 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-----ivH~Dlkp~NIll~~~~~~kl~DfG 453 (618)
||||+++|+|.+++.........+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 9999999999999976443335599999999999999999999998 7 9999999999999999999999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHh
Q 007088 454 LARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLN 533 (618)
Q Consensus 454 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~ 533 (618)
.++.......... ...|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ........
T Consensus 162 ~~~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~i~ 229 (279)
T 2w5a_A 162 LARILNHDTSFAK----TFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--------KELAGKIR 229 (279)
T ss_dssp HHHHC---CHHHH----HHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHH
T ss_pred hheeecccccccc----ccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--------HHHHHHHh
Confidence 9987654322111 12378999999999888899999999999999999999999975421 11111111
Q ss_pred cCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 007088 534 TNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLR 584 (618)
Q Consensus 534 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 584 (618)
.. ... .+ .......+.+++.+||+.||++||++.|+++.+.
T Consensus 230 ~~-~~~-----~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 230 EG-KFR-----RI----PYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp HT-CCC-----CC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred hc-ccc-----cC----CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 11 000 01 1122345677778999999999999999987543
No 168
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=7.1e-41 Score=346.93 Aligned_cols=264 Identities=20% Similarity=0.234 Sum_probs=190.0
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCC-CCCccceeEEEEe--------C
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVR-HRNLVPLLGFCVA--------K 373 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--------~ 373 (618)
..+|++.+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|+.++.++. ||||+++++++.. .
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 35788999999999999999995 578999999885543 34567889999999996 9999999999943 3
Q ss_pred CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCC--ceecCCCCCCeeeCCCCceEEcc
Q 007088 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR--IIHRNISSKCILLDGDFEPKLSD 451 (618)
Q Consensus 374 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~D 451 (618)
...++||||+. |+|.+++..... ...+++..++.++.||+.||+|||+. + |+||||||+|||++.++.+||+|
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMES-RGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHT-TCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEec
Confidence 35789999996 699888864221 13599999999999999999999998 8 99999999999999999999999
Q ss_pred cCcccccCCCCCccc--------ccccCCCCcccccCCCCC---CCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCc
Q 007088 452 FGLARLMNPVDTHLS--------TFVNGEFGDLGYVAPEYP---RTLVATPKGDVYSFGVVLLELITGERPTHLTNAPES 520 (618)
Q Consensus 452 fG~a~~~~~~~~~~~--------~~~~~~~gt~~y~aPE~~---~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~ 520 (618)
||+++.......... .......||+.|+|||++ .+..++.++||||||+++|||++|+.||........
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~ 261 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI 261 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh
Confidence 999987654322110 011123489999999988 567789999999999999999999999975332110
Q ss_pred cccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCCCC
Q 007088 521 FKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTT 594 (618)
Q Consensus 521 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 594 (618)
... .............+.+++.+||+.||.+|||+.|+++.|+.+.+......
T Consensus 262 --------~~~-------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~~ 314 (337)
T 3ll6_A 262 --------VNG-------------KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNP 314 (337)
T ss_dssp -------------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCCT
T ss_pred --------hcC-------------cccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCCCC
Confidence 000 00000001112246677889999999999999999999999988765444
No 169
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=6.5e-41 Score=339.09 Aligned_cols=246 Identities=19% Similarity=0.328 Sum_probs=196.6
Q ss_pred hhccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccC---ccCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEE
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDS---QHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 378 (618)
..++|++.+.||+|+||.||+|... +++.||+|+++.. .....++.+|+..+.++ +||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 3567999999999999999999964 7899999999753 23456788999999999 99999999999999999999
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC--------------
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD-------------- 444 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-------------- 444 (618)
||||+++|+|.+++.........+++..++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 9999999999999976433234589999999999999999999999 99999999999999844
Q ss_pred -----CceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCC
Q 007088 445 -----FEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAP 518 (618)
Q Consensus 445 -----~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~ 518 (618)
..+||+|||.+........ ..||+.|+|||.+.+. .++.++||||||+++|||++|.+|+....
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~~--------~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-- 235 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQV--------EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD-- 235 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSCC--------CCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH--
T ss_pred ccCCceEEEEcccccccccCCccc--------cCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh--
Confidence 4799999999987654321 2389999999998765 56689999999999999999988764321
Q ss_pred CccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 519 ESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 519 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+..... ... +.+. ......+.+++.+||+.||++|||+.|+++
T Consensus 236 --------~~~~~~~--~~~-----~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 236 --------QWHEIRQ--GRL-----PRIP----QVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp --------HHHHHHT--TCC-----CCCS----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --------HHHHHHc--CCC-----CCCC----cccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 1111111 110 1111 112345677777999999999999999975
No 170
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.5e-40 Score=339.83 Aligned_cols=247 Identities=24% Similarity=0.352 Sum_probs=202.8
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC--ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS--QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
+.|+..+.||+|+||.||+|.. .+++.||+|++... ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 4688899999999999999985 56899999999654 34567899999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++++|.+++... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 102 ~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 173 (303)
T 3a7i_A 102 LGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 173 (303)
T ss_dssp CTTEEHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB
T ss_pred CCCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccc
Confidence 9999999998643 489999999999999999999999 99999999999999999999999999998765432
Q ss_pred CcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
... ....||+.|+|||++.+..++.++||||||+++|||++|+.||..... ...........
T Consensus 174 ~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~------ 235 (303)
T 3a7i_A 174 IKR----NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP--------MKVLFLIPKNN------ 235 (303)
T ss_dssp CCB----CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHHSC------
T ss_pred ccc----CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH--------HHHHHHhhcCC------
Confidence 211 223489999999999999999999999999999999999999975321 11111111110
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.+.+. ......+.+++.+||+.||++|||+.|+++.
T Consensus 236 ~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 236 PPTLE----GNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp CCCCC----SSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred CCCCc----cccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 01111 1123456777789999999999999999874
No 171
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=7.4e-41 Score=374.91 Aligned_cols=251 Identities=21% Similarity=0.305 Sum_probs=198.9
Q ss_pred cEEeecCCeeEEEEEe---CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 312 NIIGTGRTGATYIAML---PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
+.||+|+||.||+|.+ ..++.||||+++... ...+++.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 4799999999999964 356899999997643 345789999999999999999999999964 568899999999
Q ss_pred CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcc
Q 007088 386 GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHL 465 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~ 465 (618)
|+|.+++.... .+++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.........
T Consensus 454 g~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQQNR----HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHhhCC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 99999996543 489999999999999999999999 99999999999999999999999999998765433221
Q ss_pred cccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccc
Q 007088 466 STFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDK 544 (618)
Q Consensus 466 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 544 (618)
. ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... .+.........
T Consensus 527 ~-~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--------~~~~~~i~~~~-------- 589 (635)
T 4fl3_A 527 K-AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--------SEVTAMLEKGE-------- 589 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHHHTTC--------
T ss_pred c-cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCC--------
Confidence 1 1122336788999999998899999999999999999998 9999975432 11111111111
Q ss_pred cccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 545 SLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 545 ~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
....+......+.+++.+||+.||++||++++|++.|+++..+
T Consensus 590 --~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 590 --RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp --CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred --CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 1111222345677888899999999999999999999988654
No 172
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=5.1e-40 Score=332.56 Aligned_cols=244 Identities=21% Similarity=0.300 Sum_probs=201.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccC----ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDS----QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|++.+.||+|+||.||+|... +++.||+|++... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 57889999999999999999964 6789999998643 234567899999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG----RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp CCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 9999999999987543 489999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
... ....|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ...........
T Consensus 167 ~~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~~~~~~---- 228 (284)
T 2vgo_A 167 LRR------RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH--------TETHRRIVNVD---- 228 (284)
T ss_dssp SCB------CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHTTC----
T ss_pred ccc------ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH--------hHHHHHHhccc----
Confidence 221 123489999999999999999999999999999999999999975321 11111111110
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..+ .......+.+++.+||+.||.+||+++|+++
T Consensus 229 ---~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 229 ---LKF----PPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp ---CCC----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---cCC----CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 001 1112345667777999999999999999986
No 173
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.8e-41 Score=349.18 Aligned_cols=263 Identities=21% Similarity=0.319 Sum_probs=204.2
Q ss_pred hccCCCCcEEeecCCeeEEEEEe------CCCcEEEEEEeccC--ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML------PGGCFIMIKRLEDS--QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 376 (618)
.++|.+.+.||+|+||.||+|+. .++..||+|++... .....++.+|+.++++++||||+++++++.+.+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46799999999999999999983 34678999999653 23456788999999999999999999999999999
Q ss_pred EEEEeecCCCccccccCCCCC---CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC---CCceEEc
Q 007088 377 LLVYSYLENGTLYDKLHPAEH---EVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG---DFEPKLS 450 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 450 (618)
++||||+++|+|.+++..... ....+++..++.++.|++.||.|||+. +|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 999999999999999976532 124589999999999999999999999 9999999999999984 4469999
Q ss_pred ccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHH
Q 007088 451 DFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWI 529 (618)
Q Consensus 451 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~ 529 (618)
|||++........... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..... .+..
T Consensus 186 Dfg~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--------~~~~ 255 (327)
T 2yfx_A 186 DFGMARDIYRASYYRK--GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--------QEVL 255 (327)
T ss_dssp CCHHHHHHHC--------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHHH
T ss_pred cccccccccccccccc--CCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH--------HHHH
Confidence 9999976533221111 112237889999999988889999999999999999998 9999875321 1111
Q ss_pred HHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhc
Q 007088 530 TLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERY 590 (618)
Q Consensus 530 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (618)
......... .........+.+++.+||+.||.+||++.|+++.|+.+....
T Consensus 256 ~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 256 EFVTSGGRM----------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp HHHHTTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred HHHhcCCCC----------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 111111110 011122346777888999999999999999999999987654
No 174
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.9e-41 Score=350.85 Aligned_cols=263 Identities=18% Similarity=0.227 Sum_probs=192.7
Q ss_pred HhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 303 KATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 303 ~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
...++|++.++||+|+||.||+|.. .+++.||+|+++... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 3457899999999999999999994 578999999997543 223567899999999999999999999999999999
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee-----CCCCceEEcccC
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL-----DGDFEPKLSDFG 453 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll-----~~~~~~kl~DfG 453 (618)
||||+++ +|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||
T Consensus 111 v~e~~~~-~L~~~~~~~~----~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg 182 (329)
T 3gbz_A 111 IFEYAEN-DLKKYMDKNP----DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFG 182 (329)
T ss_dssp EEECCSE-EHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred EEecCCC-CHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCC
Confidence 9999985 9999987554 489999999999999999999999 99999999999999 455569999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHH
Q 007088 454 LARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLL 532 (618)
Q Consensus 454 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~ 532 (618)
+++......... ....||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+.......
T Consensus 183 ~a~~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~~~~~~~ 254 (329)
T 3gbz_A 183 LARAFGIPIRQF----THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI----DQLFKIFEVL 254 (329)
T ss_dssp HHHHHC---------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHH
T ss_pred CccccCCccccc----CCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH----HHHHHHHHHh
Confidence 998765332221 223479999999998764 4899999999999999999999999754321 1111111111
Q ss_pred hcCC--ccchh--------ccccccCCCCH-----HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 533 NTNS--SLETA--------IDKSLLGNGFD-----GELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 533 ~~~~--~~~~~--------~d~~l~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.... ..... ..+........ .....+.+++.+||+.||++|||++|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 255 GLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp CCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000 00000 00000000000 02246678888999999999999999975
No 175
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7e-41 Score=349.04 Aligned_cols=264 Identities=20% Similarity=0.246 Sum_probs=195.3
Q ss_pred HhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCcc------CHHHHHHHHHHHhcCCCCCccceeEEEEeCCe
Q 007088 303 KATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQH------SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKE 375 (618)
Q Consensus 303 ~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 375 (618)
...++|++.+.||+|+||.||+|.. .+|+.||+|++..... ..+.+.+|++++++++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 3457899999999999999999995 4689999999975321 12467899999999999999999999999999
Q ss_pred eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcc
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLA 455 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 455 (618)
.++||||+++ +|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNS---LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLA 159 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCC---SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGG
T ss_pred eEEEEEcCCC-CHHHHHHhcC---cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccc
Confidence 9999999986 8888887643 3588899999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhc
Q 007088 456 RLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT 534 (618)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~ 534 (618)
+........ .....||+.|+|||++.+. .++.++|||||||++|||++|.+||...... ..+.........
T Consensus 160 ~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~----~~~~~i~~~~~~ 231 (346)
T 1ua2_A 160 KSFGSPNRA----YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL----DQLTRIFETLGT 231 (346)
T ss_dssp STTTSCCCC----CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCC
T ss_pred eeccCCccc----CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH----HHHHHHHHHcCC
Confidence 876543222 1233489999999988654 5889999999999999999999998754321 111111111110
Q ss_pred C--Cccc------hhccccccCCCC-----HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 535 N--SSLE------TAIDKSLLGNGF-----DGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 535 ~--~~~~------~~~d~~l~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. .... +.+...-..... ......+.+++.+||+.||++|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 232 PTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp CCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 0000 000000000000 122356778888999999999999999976
No 176
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2e-40 Score=351.10 Aligned_cols=204 Identities=22% Similarity=0.331 Sum_probs=163.1
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCC-CCCccceeEEEEeCC--ee
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKK--ER 376 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~~ 376 (618)
..++|++.+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++.++. ||||+++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 457899999999999999999995 578999999986532 33456789999999997 999999999997654 68
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
|+||||++ |+|.+++... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 87 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN-----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSR 157 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEecccC-cCHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence 99999997 5899888643 489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCc-----------------ccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 007088 457 LMNPVDTH-----------------LSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTN 516 (618)
Q Consensus 457 ~~~~~~~~-----------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~ 516 (618)
........ .........||+.|+|||++.+ ..++.++||||+||++|||++|++||...+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 235 (388)
T 3oz6_A 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235 (388)
T ss_dssp ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 65431110 0111233469999999998876 678999999999999999999999997643
No 177
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.3e-40 Score=340.48 Aligned_cols=249 Identities=20% Similarity=0.301 Sum_probs=199.5
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
.++|.+.+.||+|+||.||+++. .+|+.||+|+++... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 45789999999999999999996 478999999997643 3445688999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee---CCCCceEEcccCcccccC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL---DGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfG~a~~~~ 459 (618)
+++++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||++....
T Consensus 88 ~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 160 (304)
T 2jam_A 88 VSGGELFDRILERG----VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ 160 (304)
T ss_dssp CCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred CCCccHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence 99999999886543 489999999999999999999999 99999999999999 788999999999997654
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
..... ...||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ............
T Consensus 161 ~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~i~~~~~-- 224 (304)
T 2jam_A 161 NGIMS------TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE--------SKLFEKIKEGYY-- 224 (304)
T ss_dssp CBTTH------HHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHHCCC--
T ss_pred CCccc------cccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHcCCC--
Confidence 32111 12378999999999999999999999999999999999999975321 111111111100
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.............+.+++.+||+.||++|||+.|+++
T Consensus 225 -----~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 225 -----EFESPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp -----CCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred -----CCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0000111122346777888999999999999999986
No 178
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=3.3e-40 Score=357.28 Aligned_cols=278 Identities=19% Similarity=0.201 Sum_probs=214.2
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCCC-CCccceeEEEEeCCeeEEEEee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRH-RNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lV~e~ 382 (618)
.++|.+.++||+|+||.||+|.. .+++.||||++..... ..++.+|+++++.++| +++..+..++...+..++||||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 46799999999999999999995 6789999998865432 2357899999999987 5566666667778888999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee---CCCCceEEcccCcccccC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL---DGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfG~a~~~~ 459 (618)
+ +++|.+++.... ..+++..++.|+.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++...
T Consensus 85 ~-g~sL~~ll~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 85 L-GPSLEDLFNFCS---RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp C-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred C-CCCHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 9 889999997433 3599999999999999999999999 99999999999999 688999999999998765
Q ss_pred CCCCccc---ccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC
Q 007088 460 PVDTHLS---TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536 (618)
Q Consensus 460 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~ 536 (618)
....... .......||..|+|||++.+..++.++|||||||++|||++|+.||......... ..+......... .
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~-~~~~~i~~~~~~-~ 235 (483)
T 3sv0_A 158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK-QKYEKISEKKVA-T 235 (483)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHH-HHHHHHHHHHHH-S
T ss_pred CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHH-HHHHHHhhcccc-c
Confidence 4332211 1112345899999999999999999999999999999999999999865432111 111111111000 0
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCCCCCCcccCC
Q 007088 537 SLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTTDDEIMLP 601 (618)
Q Consensus 537 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~~~~~~ 601 (618)
.... +.. ....++.+++.+||+.||++||++.+|++.|+++.++.....+..++|.
T Consensus 236 ~~~~-----l~~----~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~~~~~~~dW~ 291 (483)
T 3sv0_A 236 SIEA-----LCR----GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQFDYVFDWT 291 (483)
T ss_dssp CHHH-----HHT----TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCSSCCHHH
T ss_pred cHHH-----Hhc----CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCCCccCCcCch
Confidence 0000 000 1134677888899999999999999999999999888777666555543
No 179
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=8.5e-41 Score=346.18 Aligned_cols=266 Identities=23% Similarity=0.313 Sum_probs=197.7
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCcc---CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQH---SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
.++|+..+.||+|+||.||+|... +++.||+|++..... ..+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 357889999999999999999964 589999999865432 2455789999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 104 e~~~~~~l~~~~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 104 EFVDHTILDDLELFPN----GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp ECCSEEHHHHHHHSTT----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred ecCCcchHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 9999999988765443 489999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCH-------HHHHHHH
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSL-------VEWITLL 532 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l-------~~~~~~~ 532 (618)
.... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+...... ..+....
T Consensus 177 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
T 4aaa_A 177 PGEV----YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELF 252 (331)
T ss_dssp -----------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred Cccc----cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHh
Confidence 3221 1223489999999988765 78999999999999999999999997643211100000 0000001
Q ss_pred hcCCccchhccccccCCCC-----HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 533 NTNSSLETAIDKSLLGNGF-----DGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 533 ~~~~~~~~~~d~~l~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
...........+.+..... ......+.+++.+||+.||++|||++|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 253 NKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp HHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred hhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 1111111111111111111 122456778888999999999999999875
No 180
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=3.5e-40 Score=335.52 Aligned_cols=248 Identities=21% Similarity=0.255 Sum_probs=202.2
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
.++|.+.+.||+|+||.||++... +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467888999999999999999964 57899999986542 3346688999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 94 ~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EECCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 99999999999886543 489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
...... ....||+.|+|||.+.+..++.++||||||+++|||++|+.||..... .+..........
T Consensus 167 ~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~~~~-- 232 (294)
T 2rku_A 167 YDGERK----KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL--------KETYLRIKKNEY-- 232 (294)
T ss_dssp STTCCB----CCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHTTCC--
T ss_pred cCcccc----ccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHhhccC--
Confidence 332221 223489999999999998899999999999999999999999975321 111111111100
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.+ .......+.+++.+||+.||++|||++|+++.
T Consensus 233 -----~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 233 -----SI----PKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp -----CC----CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -----CC----ccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00 11122356677779999999999999999863
No 181
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.3e-41 Score=346.16 Aligned_cols=261 Identities=23% Similarity=0.363 Sum_probs=200.9
Q ss_pred ccCHHHHHHhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcC-CCCCccceeEEEEe
Q 007088 295 KMRLSDLMKATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVA 372 (618)
Q Consensus 295 ~~~~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 372 (618)
.+++.++....++|++.+.||+|+||.||+|.. .+++.||+|++.......+.+.+|+.+++++ +||||+++++++..
T Consensus 13 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp ---CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred hccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence 344455556788999999999999999999996 5789999999987666677899999999998 79999999999987
Q ss_pred ------CCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCc
Q 007088 373 ------KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE 446 (618)
Q Consensus 373 ------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 446 (618)
.+..++||||+++|+|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~ 167 (326)
T 2x7f_A 93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG--NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAE 167 (326)
T ss_dssp CC--CCCCEEEEEEECCTTEEHHHHHHHSGG--GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCC
T ss_pred ccCccccceEEEEEEcCCCCcHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCC
Confidence 4578999999999999999875432 4689999999999999999999999 9999999999999999999
Q ss_pred eEEcccCcccccCCCCCcccccccCCCCcccccCCCCCC-----CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcc
Q 007088 447 PKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR-----TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESF 521 (618)
Q Consensus 447 ~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~ 521 (618)
+||+|||++.......... ....||+.|+|||++. +..++.++|||||||++|||++|+.||......
T Consensus 168 ~kl~Dfg~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--- 240 (326)
T 2x7f_A 168 VKLVDFGVSAQLDRTVGRR----NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM--- 240 (326)
T ss_dssp EEECCCTTTC-----------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH---
T ss_pred EEEeeCcCceecCcCcccc----ccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH---
Confidence 9999999998764322111 1234899999999886 567899999999999999999999999653211
Q ss_pred ccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 522 KGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 522 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.......... .+....... ...+.+++.+||+.||.+||++.|+++
T Consensus 241 -----~~~~~~~~~~------~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 241 -----RALFLIPRNP------APRLKSKKW---SKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp -----HHHHHHHHSC------CCCCSCSCS---CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -----HHHHHhhcCc------cccCCcccc---CHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1111111110 011111112 245667777999999999999999976
No 182
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.6e-41 Score=349.95 Aligned_cols=253 Identities=22% Similarity=0.264 Sum_probs=200.1
Q ss_pred hccCCCCcEEeecCCeeEEEEEe----CCCcEEEEEEeccCc-----cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCC
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML----PGGCFIMIKRLEDSQ-----HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKK 374 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 374 (618)
.++|++.+.||+|+||.||+++. .+++.||||+++... ...+.+.+|++++.++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36799999999999999999996 478999999986532 3345677899999999 6999999999999999
Q ss_pred eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCc
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGL 454 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 454 (618)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE----RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred eEEEEeecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCC
Confidence 9999999999999999997543 489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCCCC--CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHH
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT--LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLL 532 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~ 532 (618)
++......... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .........
T Consensus 206 a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~----~~~~~~~~~ 278 (355)
T 1vzo_A 206 SKEFVADETER---AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN----SQAEISRRI 278 (355)
T ss_dssp EEECCGGGGGG---GCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC----CHHHHHHHH
T ss_pred CeecccCCCCc---ccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc----hHHHHHHHH
Confidence 98764322211 122348999999999875 357899999999999999999999997544321 222222222
Q ss_pred hcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 007088 533 NTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERH-----TMFEVYQL 582 (618)
Q Consensus 533 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 582 (618)
.... + .........+.+++.+||+.||.+|| +++|+++.
T Consensus 279 ~~~~-------~----~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 279 LKSE-------P----PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp HHCC-------C----CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred hccC-------C----CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 1111 0 01112234566777899999999999 89988764
No 183
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=7.3e-41 Score=348.90 Aligned_cols=258 Identities=19% Similarity=0.257 Sum_probs=201.8
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccC------------------HHHHHHHHHHHhcCCCCCccce
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHS------------------EKEFLSEINTLGSVRHRNLVPL 366 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------------~~~~~~E~~~l~~l~h~niv~l 366 (618)
.++|.+.+.||+|+||.||+|.. +++.||+|++...... .+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46799999999999999999999 9999999999643211 1789999999999999999999
Q ss_pred eEEEEeCCeeEEEEeecCCCccccc------cCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceecCCCCCCe
Q 007088 367 LGFCVAKKERLLVYSYLENGTLYDK------LHPAEHEVMHMDWPLRLRIAIGSARGLAWLHH-NCNPRIIHRNISSKCI 439 (618)
Q Consensus 367 ~~~~~~~~~~~lV~e~~~~gsL~~~------l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NI 439 (618)
++++.+.+..++||||+++|+|.++ +.... ...+++..++.++.|++.||+|||+ . +|+||||||+||
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Ni 183 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY--TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNI 183 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS--CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc--ccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhE
Confidence 9999999999999999999999999 54422 2569999999999999999999999 8 999999999999
Q ss_pred eeCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCC-CCCC-ccchHHHHHHHHHHHhCCCCCCCCCC
Q 007088 440 LLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL-VATP-KGDVYSFGVVLLELITGERPTHLTNA 517 (618)
Q Consensus 440 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDVwS~Gvil~elltG~~Pf~~~~~ 517 (618)
+++.++.+||+|||.+...... ......||..|+|||.+.+. .++. ++||||||+++|||++|+.||.....
T Consensus 184 l~~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 257 (348)
T 2pml_X 184 LMDKNGRVKLSDFGESEYMVDK------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS 257 (348)
T ss_dssp EECTTSCEEECCCTTCEECBTT------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSC
T ss_pred EEcCCCcEEEeccccccccccc------cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence 9999999999999999875432 11234489999999998877 5666 99999999999999999999976433
Q ss_pred CCccccCHHHHHHHHhcCCc-cch----hcccccc---CCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 518 PESFKGSLVEWITLLNTNSS-LET----AIDKSLL---GNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 518 ~~~~~~~l~~~~~~~~~~~~-~~~----~~d~~l~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. .+.......... ... ...+... ..........+.+++.+||+.||.+|||+.|+++
T Consensus 258 ~-------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 258 L-------VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp S-------HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred H-------HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1 111111111100 000 0000000 0000123356777888999999999999999976
No 184
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.3e-40 Score=342.40 Aligned_cols=247 Identities=21% Similarity=0.261 Sum_probs=201.8
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
.++|.+.+.||+|+||.||++... +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467889999999999999999964 57899999986542 3356788999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~e~~~~~~L~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp ECCCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 99999999999886543 489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLE 539 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~ 539 (618)
...... ....||+.|+|||++.+..++.++||||||+++|||++|+.||..... .+..........
T Consensus 193 ~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~~~~~~~-- 258 (335)
T 2owb_A 193 YDGERK----KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL--------KETYLRIKKNEY-- 258 (335)
T ss_dssp STTCCB----CCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHHTCC--
T ss_pred cCcccc----cccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH--------HHHHHHHhcCCC--
Confidence 332221 223489999999999888899999999999999999999999975321 111111111110
Q ss_pred hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 540 TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 540 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+ .......+.+++.+||+.||++|||++|+++
T Consensus 259 -----~~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 259 -----SI----PKHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp -----CC----CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -----CC----CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00 0112235667777999999999999999986
No 185
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.1e-39 Score=331.20 Aligned_cols=245 Identities=22% Similarity=0.309 Sum_probs=194.5
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEe----CCeeEE
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVA----KKERLL 378 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 378 (618)
.|.+.+.||+|+||.||+|.. .++..||+|.+.... ...+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 467778999999999999995 568899999987543 334568899999999999999999999876 345799
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCC--ceecCCCCCCeeeC-CCCceEEcccCcc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR--IIHRNISSKCILLD-GDFEPKLSDFGLA 455 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~DfG~a 455 (618)
||||+++|+|.+++.... .+++..++.++.|++.||+|||+. + |+||||||+||+++ .++.+||+|||++
T Consensus 107 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEEecCCCCHHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence 999999999999996543 489999999999999999999999 7 99999999999998 7899999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcC
Q 007088 456 RLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN 535 (618)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~ 535 (618)
........ ....||+.|+|||.+.+ .++.++||||||+++|+|++|+.||..... ...........
T Consensus 180 ~~~~~~~~------~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-------~~~~~~~~~~~ 245 (290)
T 1t4h_A 180 TLKRASFA------KAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-------AAQIYRRVTSG 245 (290)
T ss_dssp GGCCTTSB------EESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-------HHHHHHHHTTT
T ss_pred cccccccc------ccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCc-------HHHHHHHHhcc
Confidence 76543221 12348999999998764 589999999999999999999999975332 12222222111
Q ss_pred CccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 536 SSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 536 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.. ....+ ......+.+++.+||+.||.+|||++|+++
T Consensus 246 ~~-~~~~~--------~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 246 VK-PASFD--------KVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CC-CGGGG--------GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CC-ccccC--------CCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 11 10011 111235777888999999999999999975
No 186
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=342.22 Aligned_cols=261 Identities=19% Similarity=0.249 Sum_probs=192.6
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCccCH--HHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSE--KEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
++|.+.+.||+|+||.||+|... +++.||+|++....... ..+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57889999999999999999964 78999999996543221 2355799999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
++ |+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 82 LD-KDLKQYLDDCG---NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp CS-EEHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC----
T ss_pred cc-cCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc
Confidence 97 58988886543 3589999999999999999999999 99999999999999999999999999998654322
Q ss_pred CcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcC--Cccc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN--SSLE 539 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~--~~~~ 539 (618)
.. .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ .+.......... ....
T Consensus 155 ~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~----~~~~i~~~~~~~~~~~~~ 226 (324)
T 3mtl_A 155 KT----YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE----QLHFIFRILGTPTEETWP 226 (324)
T ss_dssp ------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCCCCTTTST
T ss_pred cc----cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCChHhch
Confidence 21 122347999999998876 568999999999999999999999997643211 111111111000 0000
Q ss_pred hhcc---------ccccCCC----CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 540 TAID---------KSLLGNG----FDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 540 ~~~d---------~~l~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.... +...... .......+.+++.+||+.||++|||++|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 227 GILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp TGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000 0000000 0112345677888999999999999999976
No 187
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=3.2e-40 Score=350.15 Aligned_cols=264 Identities=21% Similarity=0.242 Sum_probs=202.6
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCC--------CCCccceeEEEE----
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR--------HRNLVPLLGFCV---- 371 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~---- 371 (618)
.++|++.++||+|+||.||+|+. .+++.||+|+++......+.+.+|+.++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 46799999999999999999984 56899999999876666678899999999985 788999999987
Q ss_pred eCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC------
Q 007088 372 AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF------ 445 (618)
Q Consensus 372 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~------ 445 (618)
.....++||||+ +++|.+.+..... ..+++..++.++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSNY--QGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhh
Confidence 456789999999 4566666544322 45899999999999999999999864 799999999999999775
Q ss_pred -------------------------------------------ceEEcccCcccccCCCCCcccccccCCCCcccccCCC
Q 007088 446 -------------------------------------------EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPE 482 (618)
Q Consensus 446 -------------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE 482 (618)
.+||+|||+++...... ....||+.|+|||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~-------~~~~gt~~y~aPE 263 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF-------TEDIQTRQYRSLE 263 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS-------CSCCSCGGGCCHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC-------ccCCCCCcccCCh
Confidence 79999999998764321 2234899999999
Q ss_pred CCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcccc--CHHHHHHHHhcCC---------ccchhcccc-----c
Q 007088 483 YPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKG--SLVEWITLLNTNS---------SLETAIDKS-----L 546 (618)
Q Consensus 483 ~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~--~l~~~~~~~~~~~---------~~~~~~d~~-----l 546 (618)
++.+..++.++|||||||++|||++|+.||......+.... .+..... ..... ......... +
T Consensus 264 ~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 342 (397)
T 1wak_A 264 VLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIE-LLGKVPRKLIVAGKYSKEFFTKKGDLKHI 342 (397)
T ss_dssp HHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHH-HHCSCCHHHHHHCTTGGGTBCTTSSBSSC
T ss_pred hhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHH-hcCCCChHHhhcccccccccCCccccccc
Confidence 99998999999999999999999999999986554322110 0111111 00000 000000000 0
Q ss_pred --------------cCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 547 --------------LGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 547 --------------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
...........+.+++.+||+.||++|||++|+++
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 343 TKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 01224566778999999999999999999999975
No 188
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.9e-40 Score=356.70 Aligned_cols=196 Identities=23% Similarity=0.302 Sum_probs=154.4
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeC-----Ce
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK-----KE 375 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 375 (618)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|++++++++||||+++++++... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 46899999999999999999995 478999999996532 3346788999999999999999999999543 46
Q ss_pred eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcc
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLA 455 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 455 (618)
.|+||||+. |+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTPV----YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSSC----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeccc-cchhhhcccCC----CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 899999985 69999886543 499999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcc-----------------------cccccCCCCcccccCCCCC-CCCCCCCccchHHHHHHHHHHHhC
Q 007088 456 RLMNPVDTHL-----------------------STFVNGEFGDLGYVAPEYP-RTLVATPKGDVYSFGVVLLELITG 508 (618)
Q Consensus 456 ~~~~~~~~~~-----------------------~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDVwS~Gvil~elltG 508 (618)
+......... .....+.+||+.|+|||++ .+..++.++|||||||++|||++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 8765322110 0122345689999999975 566799999999999999999993
No 189
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1e-40 Score=349.84 Aligned_cols=269 Identities=19% Similarity=0.211 Sum_probs=199.5
Q ss_pred cCHHHHHHhhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCcc------------CHHHHHHHHHHHhcCCCCCc
Q 007088 296 MRLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQH------------SEKEFLSEINTLGSVRHRNL 363 (618)
Q Consensus 296 ~~~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------~~~~~~~E~~~l~~l~h~ni 363 (618)
..+.++....++|.+.+.||+|+||.||+|...+|+.||||++..... ..+.+.+|++++++++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 346788889999999999999999999999988899999999864221 12678999999999999999
Q ss_pred cceeEEEEeC-----CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCC
Q 007088 364 VPLLGFCVAK-----KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKC 438 (618)
Q Consensus 364 v~l~~~~~~~-----~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 438 (618)
+++++++... ...++||||++ |+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+|
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~N 164 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR---IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGN 164 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGG
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHH
Confidence 9999998543 35799999998 58888876543 4589999999999999999999999 99999999999
Q ss_pred eeeCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCC
Q 007088 439 ILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNA 517 (618)
Q Consensus 439 Ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~ 517 (618)
|+++.++.+||+|||+++........ ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 165 Il~~~~~~~kl~Dfg~~~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~ 239 (362)
T 3pg1_A 165 ILLADNNDITICDFNLAREDTADANK-----THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF 239 (362)
T ss_dssp EEECTTCCEEECCTTC--------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred EEEcCCCCEEEEecCccccccccccc-----ceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 99999999999999999754432221 12348899999998876 6789999999999999999999999976432
Q ss_pred CCccccCHHHHHHHHhcCCcc-----------chhcccccc---CCC----CHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 007088 518 PESFKGSLVEWITLLNTNSSL-----------ETAIDKSLL---GNG----FDGELHQFLRVACNCVLPTPKERHTMFEV 579 (618)
Q Consensus 518 ~~~~~~~l~~~~~~~~~~~~~-----------~~~~d~~l~---~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~ev 579 (618)
.+ .+....... ..... .+.+..... ... .......+.+++.+||+.||++|||+.|+
T Consensus 240 ~~----~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 314 (362)
T 3pg1_A 240 YN----QLNKIVEVV-GTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQA 314 (362)
T ss_dssp HH----HHHHHHHHH-CCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HH----HHHHHHHHc-CCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHH
Confidence 11 111111100 00000 000000000 000 11123457788889999999999999999
Q ss_pred HH
Q 007088 580 YQ 581 (618)
Q Consensus 580 l~ 581 (618)
++
T Consensus 315 l~ 316 (362)
T 3pg1_A 315 LR 316 (362)
T ss_dssp HT
T ss_pred Hc
Confidence 75
No 190
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=7.8e-40 Score=333.59 Aligned_cols=262 Identities=22% Similarity=0.287 Sum_probs=198.6
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
++|++.+.||+|+||.||+|... +++.||+|+++... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57889999999999999999964 78999999986543 233678899999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|++ |+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+......
T Consensus 83 ~~~-~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 83 FLH-QDLKKFMDASAL--TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp CCS-EEHHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred ccc-CCHHHHHHhhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 997 599998875543 3589999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCcccccccCCCCcccccCCCCCCCCC-CCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCc-c-
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLV-ATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSS-L- 538 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~-~- 538 (618)
.... ....+|+.|+|||.+.+.. ++.++||||||+++|||++|+.||...... ..+............ .
T Consensus 157 ~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~ 228 (299)
T 2r3i_A 157 VRTY----THEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI----DQLFRIFRTLGTPDEVVW 228 (299)
T ss_dssp SBCT----TSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCCCCTTTS
T ss_pred cccc----CcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH----HHHHHHHHHhCCCchhhh
Confidence 2211 1234789999999987765 799999999999999999999999764321 111111111110000 0
Q ss_pred ---ch--hcccccc---CCC----CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 539 ---ET--AIDKSLL---GNG----FDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 539 ---~~--~~d~~l~---~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.. ...+... ... .......+.+++.+||+.||++|||+.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00 0000000 000 0112345677888999999999999999976
No 191
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=6.3e-40 Score=342.45 Aligned_cols=265 Identities=21% Similarity=0.258 Sum_probs=200.4
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeC-------
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK------- 373 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------- 373 (618)
.++|++.+.||+|+||.||+|.. .+|+.||+|++.... .....+.+|++++++++||||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 46799999999999999999996 578999999986432 3345788999999999999999999999873
Q ss_pred -CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEccc
Q 007088 374 -KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDF 452 (618)
Q Consensus 374 -~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 452 (618)
+..++||||+++ +|.+.+.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVL---VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CceEEEEEeccCC-CHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccc
Confidence 468999999985 7777765543 3489999999999999999999999 9999999999999999999999999
Q ss_pred CcccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHH
Q 007088 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITL 531 (618)
Q Consensus 453 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~ 531 (618)
|+++.................||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ........
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~i~~ 243 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ-----HQLALISQ 243 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHHH
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHH
Confidence 9998765433332333344568999999998876 45799999999999999999999999764321 11111111
Q ss_pred HhcCCc---cchhcccc----c---c--CCCCHHH------HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 532 LNTNSS---LETAIDKS----L---L--GNGFDGE------LHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 532 ~~~~~~---~~~~~d~~----l---~--~~~~~~~------~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
...... ....-... + . .....+. ...+.+++.+||+.||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 244 LCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp HHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 111000 00000000 0 0 0001111 234778888999999999999999976
No 192
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=8.1e-40 Score=343.43 Aligned_cols=256 Identities=20% Similarity=0.327 Sum_probs=202.9
Q ss_pred HHHHHhhccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCcc---------CHHHHHHHHHHHhcC-CCCCcccee
Q 007088 299 SDLMKATNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQH---------SEKEFLSEINTLGSV-RHRNLVPLL 367 (618)
Q Consensus 299 ~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l-~h~niv~l~ 367 (618)
.......++|++.+.||+|+||.||+|... +|+.||||++..... ..+.+.+|+.++.++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 344556678999999999999999999974 799999999865321 134678999999999 799999999
Q ss_pred EEEEeCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCce
Q 007088 368 GFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEP 447 (618)
Q Consensus 368 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 447 (618)
+++...+..++||||+++++|.+++... ..+++..+..++.||+.||.|||+. ||+||||||+||+++.++.+
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~i 239 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTEK----VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQI 239 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCE
Confidence 9999999999999999999999998654 3489999999999999999999999 99999999999999999999
Q ss_pred EEcccCcccccCCCCCcccccccCCCCcccccCCCCCC------CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCcc
Q 007088 448 KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR------TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESF 521 (618)
Q Consensus 448 kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~ 521 (618)
||+|||++........ .....||+.|+|||++. ...++.++|||||||++|||++|+.||.....
T Consensus 240 kl~DfG~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~---- 310 (365)
T 2y7j_A 240 RLSDFGFSCHLEPGEK-----LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ---- 310 (365)
T ss_dssp EECCCTTCEECCTTCC-----BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH----
T ss_pred EEEecCcccccCCCcc-----cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH----
Confidence 9999999987654322 12345899999999875 33588999999999999999999999975321
Q ss_pred ccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 522 KGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 522 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.............. ..+.. ......+.+++.+||+.||++|||+.|+++
T Consensus 311 ----~~~~~~i~~~~~~~--~~~~~-----~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 311 ----ILMLRMIMEGQYQF--SSPEW-----DDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp ----HHHHHHHHHTCCCC--CHHHH-----SSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ----HHHHHHHHhCCCCC--CCccc-----ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111111110000 00000 012245777888999999999999999976
No 193
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=2.8e-40 Score=360.49 Aligned_cols=251 Identities=20% Similarity=0.284 Sum_probs=200.6
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC---ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS---QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
..++|++.+.||+|+||.||+|.. .+++.||+|++... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 346799999999999999999996 47899999998642 34567899999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeC---CCCceEEcccCccc
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLD---GDFEPKLSDFGLAR 456 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DfG~a~ 456 (618)
|||+++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++ .++.+||+|||+++
T Consensus 100 ~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp ECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 99999999999886543 489999999999999999999999 999999999999995 55679999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~ 536 (618)
....... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... .+.........
T Consensus 173 ~~~~~~~-----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~i~~~~ 238 (486)
T 3mwu_A 173 CFQQNTK-----MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--------YDILKRVETGK 238 (486)
T ss_dssp TBCCC---------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTC
T ss_pred ECCCCCc-----cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCC
Confidence 7654322 223458999999999875 589999999999999999999999975432 11111111111
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 537 SLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 537 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.... ...+......+.+++.+||+.||.+|||+.|+++.
T Consensus 239 ~~~~-------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 239 YAFD-------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp CCSC-------SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CCCC-------CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000 00011223456677779999999999999999873
No 194
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.7e-39 Score=327.09 Aligned_cols=246 Identities=20% Similarity=0.320 Sum_probs=194.2
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccC----ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDS----QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
.++|.+.+.||+|+||.||+|... +++.||+|++... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 357888999999999999999965 7899999998643 23456789999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 162 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG----RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162 (276)
T ss_dssp EECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred EeccCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccC
Confidence 99999999999986543 489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccCCCCcccccCCCCCCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCcc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRTLVA-TPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSL 538 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~ 538 (618)
..... ....+++.|+|||.+.+..+ +.++||||||+++|+|++|+.||..... ............
T Consensus 163 ~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~~~~- 228 (276)
T 2h6d_A 163 DGEFL-----RTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV--------PTLFKKIRGGVF- 228 (276)
T ss_dssp C------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCC-
T ss_pred CCcce-----ecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH--------HHHHHHhhcCcc-
Confidence 43211 12348899999999987765 6899999999999999999999975321 111111111100
Q ss_pred chhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 539 ETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 539 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+ .......+.+++.+||+.||++|||+.|+++
T Consensus 229 ------~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 229 ------YI----PEYLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp ------CC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ------cC----chhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 00 1112245677778999999999999999987
No 195
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=6.9e-40 Score=338.94 Aligned_cols=257 Identities=17% Similarity=0.223 Sum_probs=197.9
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCC-CCCccceeEEEEe--CCeeEEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR-HRNLVPLLGFCVA--KKERLLVY 380 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~lV~ 380 (618)
.++|++.+.||+|+||.||+|.. .+++.||+|+++.. ..+.+.+|++++++++ ||||+++++++.+ ....++||
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 36799999999999999999984 67899999999753 4577899999999997 9999999999988 56789999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC-ceEEcccCcccccC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF-EPKLSDFGLARLMN 459 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfG~a~~~~ 459 (618)
||+++++|.+++. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++...
T Consensus 113 e~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp ECCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 9999999999874 388999999999999999999999 999999999999999776 89999999998765
Q ss_pred CCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHH------
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLL------ 532 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~------ 532 (618)
..... ....||..|+|||.+.+ ..++.++|||||||++|||++|+.||....... ..+.......
T Consensus 183 ~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~---~~l~~~~~~~~~~~~~ 254 (330)
T 3nsz_A 183 PGQEY-----NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY---DQLVRIAKVLGTEDLY 254 (330)
T ss_dssp TTCCC-----CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH---HHHHHHHHHHCHHHHH
T ss_pred CCCcc-----ccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchH---HHHHHHHHhcCCchhh
Confidence 43321 22348899999999876 678999999999999999999999996533211 0111110000
Q ss_pred ---hcCC-c----cchh--------ccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 533 ---NTNS-S----LETA--------IDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 533 ---~~~~-~----~~~~--------~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.... . ..+. ................+.+++.+||+.||++|||++|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 255 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000 0 0000 0000011111113456778888999999999999999976
No 196
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2e-40 Score=350.57 Aligned_cols=274 Identities=21% Similarity=0.258 Sum_probs=198.1
Q ss_pred HHhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeC-------
Q 007088 302 MKATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAK------- 373 (618)
Q Consensus 302 ~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------- 373 (618)
....++|++.+.||+|+||.||+|.. .+|+.||+|++...... ..+|++++++++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~---~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY---KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS---CCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch---HHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 44567899999999999999999995 67899999998654322 23799999999999999999998543
Q ss_pred -------------------------------CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHH
Q 007088 374 -------------------------------KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH 422 (618)
Q Consensus 374 -------------------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH 422 (618)
...++||||+++ +|.+.+.........+++..+..++.||++||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 347899999984 877776542222346999999999999999999999
Q ss_pred hCCCCCceecCCCCCCeeeC-CCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCC-CCCCccchHHHHH
Q 007088 423 HNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGV 500 (618)
Q Consensus 423 ~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gv 500 (618)
+. +|+||||||+||+++ .++.+||+|||+++........ ....+|+.|+|||.+.+. .++.++||||+||
T Consensus 159 ~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 230 (383)
T 3eb0_A 159 SL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPS-----VAYICSRFYRAPELMLGATEYTPSIDLWSIGC 230 (383)
T ss_dssp TT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCC-----CCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHH
T ss_pred HC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCC-----cCcccCCCccCHHHhcCCCCCCcchhhhhHHH
Confidence 99 999999999999998 6889999999999876543322 123478999999988764 4899999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhc---------CCccchhccccccCC-----CCHHHHHHHHHHHhhcc
Q 007088 501 VLLELITGERPTHLTNAPESFKGSLVEWITLLNT---------NSSLETAIDKSLLGN-----GFDGELHQFLRVACNCV 566 (618)
Q Consensus 501 il~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~---------~~~~~~~~d~~l~~~-----~~~~~~~~l~~li~~cl 566 (618)
++|||++|+.||......+ .+......... .....+..-+.+... ........+.+++.+||
T Consensus 231 il~ell~g~~pf~~~~~~~----~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 306 (383)
T 3eb0_A 231 VFGELILGKPLFSGETSID----QLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQIL 306 (383)
T ss_dssp HHHHHHHSSCSSCCSSHHH----HHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHC
T ss_pred HHHHHHhCCCCCCCCChHH----HHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHc
Confidence 9999999999997643211 11111111100 000000000011101 01112345778888999
Q ss_pred CCCCCCCCCHHHHHH--HHHHhhhhcC
Q 007088 567 LPTPKERHTMFEVYQ--LLRAIAERYH 591 (618)
Q Consensus 567 ~~dP~~RPs~~evl~--~L~~i~~~~~ 591 (618)
+.||++|||+.|+++ .++++...+.
T Consensus 307 ~~dP~~R~t~~e~l~hp~f~~~~~~~~ 333 (383)
T 3eb0_A 307 RYEPDLRINPYEAMAHPFFDHLRNSYE 333 (383)
T ss_dssp CSSGGGSCCHHHHHTSGGGHHHHHC--
T ss_pred cCChhhCCCHHHHhcCHHHHHHHhhcc
Confidence 999999999999984 4555554433
No 197
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=6.7e-40 Score=357.36 Aligned_cols=249 Identities=20% Similarity=0.316 Sum_probs=201.7
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccC----ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDS----QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
.++|++.+.||+|+||.||+|... +++.||||++... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 457999999999999999999964 7899999998643 34567899999999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee---CCCCceEEcccCccc
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL---DGDFEPKLSDFGLAR 456 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfG~a~ 456 (618)
|||+.+|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++
T Consensus 105 ~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp ECCCCSCBHHHHHHTCS----CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 99999999999887553 489999999999999999999999 99999999999999 567899999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~ 536 (618)
......... ...||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... .+.........
T Consensus 178 ~~~~~~~~~-----~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~i~~~~ 243 (484)
T 3nyv_A 178 HFEASKKMK-----DKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE--------YDILKKVEKGK 243 (484)
T ss_dssp HBCCCCSHH-----HHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCC
T ss_pred Ecccccccc-----cCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHcCC
Confidence 765433221 2248999999998866 689999999999999999999999975432 11111111111
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 537 SLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 537 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.... ...+......+.+++.+||+.||.+|||+.|+++
T Consensus 244 ~~~~-------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 244 YTFE-------LPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp CCCC-------SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCC-------CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 0000 0001122345667777999999999999999986
No 198
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.2e-39 Score=357.10 Aligned_cols=250 Identities=25% Similarity=0.322 Sum_probs=198.6
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--------------cCHHHHHHHHHHHhcCCCCCccceeE
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--------------HSEKEFLSEINTLGSVRHRNLVPLLG 368 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~l~~ 368 (618)
..++|.+.++||+|+||.||+|.. .+++.||+|++.... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 457899999999999999999995 468899999996532 23567899999999999999999999
Q ss_pred EEEeCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCC---
Q 007088 369 FCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDF--- 445 (618)
Q Consensus 369 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--- 445 (618)
++.+.+..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~ 186 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH----KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLL 186 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCc
Confidence 9999999999999999999999886543 499999999999999999999999 999999999999998776
Q ss_pred ceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCH
Q 007088 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSL 525 (618)
Q Consensus 446 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l 525 (618)
.+||+|||+++....... .....||+.|+|||++. ..++.++||||+||++|+|++|+.||.....
T Consensus 187 ~~kl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------- 252 (504)
T 3q5i_A 187 NIKIVDFGLSSFFSKDYK-----LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND-------- 252 (504)
T ss_dssp SEEECCCTTCEECCTTSC-----BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------
T ss_pred cEEEEECCCCEEcCCCCc-----cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH--------
Confidence 699999999987654322 12345899999999987 4689999999999999999999999975432
Q ss_pred HHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 526 VEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 526 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.+............ +... +......+.+++.+||+.||.+|||++|+++
T Consensus 253 ~~~~~~i~~~~~~~---~~~~----~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 253 QDIIKKVEKGKYYF---DFND----WKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHHHHHHHHCCCCC---CHHH----HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHcCCCCC---Cccc----cCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 11222211111000 0000 0112245677778999999999999999985
No 199
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=7.8e-40 Score=337.54 Aligned_cols=250 Identities=22% Similarity=0.304 Sum_probs=194.6
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---------cCHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---------HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK 374 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 374 (618)
.++|.+.+.||+|+||.||+|.. .+++.||||++.... .....+.+|++++++++||||+++++++...+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 46799999999999999999995 468999999986532 12235789999999999999999999987655
Q ss_pred eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCc---eEEcc
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE---PKLSD 451 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~D 451 (618)
.++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++. +||+|
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred -eEEEEecCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 899999999999999987543 489999999999999999999999 9999999999999987654 99999
Q ss_pred cCcccccCCCCCcccccccCCCCcccccCCCCC---CCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHH
Q 007088 452 FGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYP---RTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEW 528 (618)
Q Consensus 452 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~ 528 (618)
||+++........ ....||+.|+|||++ ....++.++|||||||++|||++|+.||....... .+...
T Consensus 161 fg~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~ 231 (322)
T 2ycf_A 161 FGHSKILGETSLM-----RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV----SLKDQ 231 (322)
T ss_dssp CTTCEECCCCHHH-----HHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS----CHHHH
T ss_pred Cccceeccccccc-----ccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH----HHHHH
Confidence 9999876542211 112379999999986 35678999999999999999999999997644321 22222
Q ss_pred HHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 529 ITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 529 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.... .... .+... ......+.+++.+||+.||++||++.|+++
T Consensus 232 ~~~~--~~~~----~~~~~----~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 232 ITSG--KYNF----IPEVW----AEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHHT--CCCC----CHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHhC--cccc----Cchhh----hhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 1110 0000 00000 112346778888999999999999999974
No 200
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.2e-40 Score=357.00 Aligned_cols=199 Identities=22% Similarity=0.253 Sum_probs=173.9
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcC------CCCCccceeEEEEeCCeeE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSV------RHRNLVPLLGFCVAKKERL 377 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~~ 377 (618)
..+|++.+.||+|+||.||+|.. .+++.||||+++......+++.+|+.++..+ +|+||+++++++...+..+
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 45799999999999999999985 4689999999987665566788888888776 5779999999999999999
Q ss_pred EEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCc--eEEcccCcc
Q 007088 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE--PKLSDFGLA 455 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~DfG~a 455 (618)
+||||+. ++|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +||+|||++
T Consensus 176 lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKNKF--QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp EEECCCC-CBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred EEEeccC-CCHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccc
Confidence 9999996 599998876543 3589999999999999999999999 9999999999999999887 999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 007088 456 RLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516 (618)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~ 516 (618)
+...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 250 ~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 250 CYEHQRV-------YTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp EETTCCC-------CSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eecCCcc-------cccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 7654321 12348999999999999999999999999999999999999997643
No 201
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=5.1e-40 Score=334.13 Aligned_cols=251 Identities=20% Similarity=0.282 Sum_probs=195.1
Q ss_pred cCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEeecC
Q 007088 307 SFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSYLE 384 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 384 (618)
+|.....||+|+||.||+|.. .+++.||+|.+.... ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 355567999999999999995 568899999987643 345678999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC-CCceEEcccCcccccCCCCC
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG-DFEPKLSDFGLARLMNPVDT 463 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfG~a~~~~~~~~ 463 (618)
+++|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||.+........
T Consensus 103 ~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 103 GGSLSALLRSKWG-PLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp EEEHHHHHHHTTC-CCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCHHHHHHhhcc-CCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 9999999875432 23577899999999999999999999 9999999999999987 89999999999987654222
Q ss_pred cccccccCCCCcccccCCCCCCCCC--CCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchh
Q 007088 464 HLSTFVNGEFGDLGYVAPEYPRTLV--ATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETA 541 (618)
Q Consensus 464 ~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 541 (618)
.. ....||+.|+|||.+.+.. ++.++||||||+++|||++|+.||...... ...........
T Consensus 179 ~~----~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~~~------ 242 (295)
T 2clq_A 179 CT----ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP------QAAMFKVGMFK------ 242 (295)
T ss_dssp ------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH------HHHHHHHHHHC------
T ss_pred cc----cccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch------hHHHHhhcccc------
Confidence 11 2234899999999986543 789999999999999999999999643211 00111100000
Q ss_pred ccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 542 IDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 542 ~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..+.+ .......+.+++.+||+.||++||++.|+++
T Consensus 243 ~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 243 VHPEI----PESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp CCCCC----CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ccccc----cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00111 1122345677778999999999999999975
No 202
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3.7e-41 Score=355.36 Aligned_cols=249 Identities=14% Similarity=0.144 Sum_probs=191.3
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC----ccCHHHHHHHH---HHHhcCCCCCcccee-------E
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS----QHSEKEFLSEI---NTLGSVRHRNLVPLL-------G 368 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~---~~l~~l~h~niv~l~-------~ 368 (618)
..++|.+.+.||+|+||.||+|+. .+|+.||||++... ....+.+.+|+ +.+++++||||++++ +
T Consensus 71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 356788999999999999999994 67999999999642 23457789999 556666899999998 7
Q ss_pred EEEeCCe-----------------eEEEEeecCCCccccccCCCCC---CCcCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 007088 369 FCVAKKE-----------------RLLVYSYLENGTLYDKLHPAEH---EVMHMDWPLRLRIAIGSARGLAWLHHNCNPR 428 (618)
Q Consensus 369 ~~~~~~~-----------------~~lV~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ 428 (618)
++.+.+. .++||||+ +|+|.+++..... ....+++..++.|+.||+.||+|||++ +
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 226 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 226 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 7766532 78999999 6799999875321 112345688899999999999999999 9
Q ss_pred ceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCC-----------CCCCccchHH
Q 007088 429 IIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL-----------VATPKGDVYS 497 (618)
Q Consensus 429 ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDVwS 497 (618)
|+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++.+. .++.++||||
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwS 298 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAR-------VVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWA 298 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTCE-------EECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHH
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecCCc-------ccCCCC-cCccChhhhcccccccccccccccCChhhhHHH
Confidence 999999999999999999999999999864321 123347 999999998877 8999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHH
Q 007088 498 FGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMF 577 (618)
Q Consensus 498 ~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 577 (618)
|||++|||++|+.||........... .. ... ... ...+.+++.+||+.||++|||+.
T Consensus 299 lG~il~elltg~~Pf~~~~~~~~~~~-----------------~~-~~~--~~~---~~~~~~li~~~L~~dp~~Rpt~~ 355 (377)
T 3byv_A 299 LGLVIYWIWCADLPITKDAALGGSEW-----------------IF-RSC--KNI---PQPVRALLEGFLRYPKEDRLLPL 355 (377)
T ss_dssp HHHHHHHHHHSSCCC------CCSGG-----------------GG-SSC--CCC---CHHHHHHHHHHTCSSGGGCCCHH
T ss_pred HHHHHHHHHHCCCCCcccccccchhh-----------------hh-hhc--cCC---CHHHHHHHHHHcCCCchhCCCHH
Confidence 99999999999999975443221110 00 000 111 24566777799999999999999
Q ss_pred HHHH--HHHHhh
Q 007088 578 EVYQ--LLRAIA 587 (618)
Q Consensus 578 evl~--~L~~i~ 587 (618)
|+++ .++++.
T Consensus 356 e~l~hp~f~~~~ 367 (377)
T 3byv_A 356 QAMETPEYEQLR 367 (377)
T ss_dssp HHHTSHHHHHHH
T ss_pred HHhhChHHHHHH
Confidence 9985 444443
No 203
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=6.8e-40 Score=343.44 Aligned_cols=199 Identities=22% Similarity=0.364 Sum_probs=174.1
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
.++|++.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 457999999999999999999964 68999999997642 334678999999999999999999999999999999999
Q ss_pred ecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCC
Q 007088 382 YLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPV 461 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 461 (618)
|+++|+|.+++.... .+++..+..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp CCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred CCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence 999999999997543 4899999999999999999999831 7999999999999999999999999999754321
Q ss_pred CCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 007088 462 DTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLT 515 (618)
Q Consensus 462 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~ 515 (618)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 186 ~------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 186 M------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp C----------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred c------ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 1 12234899999999999999999999999999999999999999754
No 204
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2e-40 Score=336.34 Aligned_cols=253 Identities=19% Similarity=0.273 Sum_probs=184.7
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCcc--CH-HHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQH--SE-KEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~-~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
.++|++.+.||+|+||.||+|.. .+++.||+|+++.... .. +.+.++...++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 46789999999999999999995 5789999999976432 22 23445555688889999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++ +|.+++.........+++..++.++.|++.||+|||+++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 99974 887777543222356999999999999999999999843 899999999999999999999999999987654
Q ss_pred CCCcccccccCCCCcccccCCCCC----CCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYP----RTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~ 536 (618)
.... ....||+.|+|||++ .+..++.++||||||+++|||++|+.||..... .......... ..
T Consensus 163 ~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~-~~ 230 (290)
T 3fme_A 163 DVAK-----DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT------PFQQLKQVVE-EP 230 (290)
T ss_dssp ------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC------HHHHHHHHHH-SC
T ss_pred cccc-----cccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc------hHHHHHHHhc-cC
Confidence 3221 122489999999985 566789999999999999999999999975322 1111111111 11
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 537 SLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 537 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. +.... ......+.+++.+||+.||++|||+.|+++
T Consensus 231 ~------~~~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 231 S------PQLPA---DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp C------CCCCT---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred C------CCccc---ccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 0 01111 112345677788999999999999999986
No 205
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=4.1e-40 Score=344.89 Aligned_cols=270 Identities=20% Similarity=0.239 Sum_probs=191.3
Q ss_pred HHHHHhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCe--
Q 007088 299 SDLMKATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKE-- 375 (618)
Q Consensus 299 ~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-- 375 (618)
.+.....++|++.+.||+|+||.||+|.. .+++.||||++.........+.+|++.+..++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 45667788999999999999999999996 468999999987665555567788888999999999999999976443
Q ss_pred -----eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHH--hCCCCCceecCCCCCCeeeCC-CCce
Q 007088 376 -----RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH--HNCNPRIIHRNISSKCILLDG-DFEP 447 (618)
Q Consensus 376 -----~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--~~~~~~ivH~Dlkp~NIll~~-~~~~ 447 (618)
.++||||+++ +|.+.+.........+++..+..++.|++.||.||| +. +|+||||||+|||++. ++.+
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~ 171 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTL 171 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEE
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcE
Confidence 7899999987 554433321112245899999999999999999999 88 9999999999999996 8999
Q ss_pred EEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHH
Q 007088 448 KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLV 526 (618)
Q Consensus 448 kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~ 526 (618)
||+|||+++........ ....||+.|+|||++.+. .++.++|||||||++|||++|+.||....... .+.
T Consensus 172 kl~Dfg~a~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~----~~~ 242 (360)
T 3e3p_A 172 KLCDFGSAKKLSPSEPN-----VAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG----QLH 242 (360)
T ss_dssp EECCCTTCBCCCTTSCC-----CSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHH
T ss_pred EEeeCCCceecCCCCCc-----ccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH----HHH
Confidence 99999999876543322 123489999999988654 48999999999999999999999997643211 111
Q ss_pred HHHHHHhc-----------CCccchhcc------ccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 527 EWITLLNT-----------NSSLETAID------KSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 527 ~~~~~~~~-----------~~~~~~~~d------~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
........ ........+ ..............+.+++.+||+.||.+|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 243 EIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 11111100 000000000 00001111123567888888999999999999999975
No 206
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.1e-40 Score=338.52 Aligned_cols=259 Identities=24% Similarity=0.362 Sum_probs=196.9
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC--CC--cEEEEEEeccCc----cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP--GG--CFIMIKRLEDSQ----HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~--~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 376 (618)
.++|++.+.||+|+||.||+|... ++ ..||+|+++... ...+.+.+|++++++++||||+++++++.+.+ .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 357888999999999999999842 33 368999987532 34567899999999999999999999998765 8
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
++||||+++|+|.+++.... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ---GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG---GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eeeEecccCCCHHHHHHhcc---CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccc
Confidence 89999999999999987543 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcC
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTN 535 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~ 535 (618)
.......... ......+|..|+|||.+.+..++.++||||||+++|||++ |+.||..... .+........
T Consensus 170 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~ 240 (291)
T 1u46_A 170 ALPQNDDHYV-MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG--------SQILHKIDKE 240 (291)
T ss_dssp ECCC-CCEEE-C-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTS
T ss_pred cccccccchh-hhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH--------HHHHHHHHcc
Confidence 7654332211 1122347788999999988888999999999999999999 9999975432 1222222111
Q ss_pred CccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhh
Q 007088 536 SSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAE 588 (618)
Q Consensus 536 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 588 (618)
... ..........+.+++.+||+.||++|||+.++++.|+++..
T Consensus 241 ~~~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 241 GER---------LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp CCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred CCC---------CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 110 00111233567778889999999999999999999998754
No 207
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=6.2e-39 Score=327.87 Aligned_cols=251 Identities=20% Similarity=0.280 Sum_probs=195.7
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc-----cCHHHHHHHHHHHhcCCCCCccceeEEEE--eCCee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ-----HSEKEFLSEINTLGSVRHRNLVPLLGFCV--AKKER 376 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~ 376 (618)
.++|.+.+.||+|+||.||++.. .+++.||+|+++... ...+.+.+|++++++++||||+++++++. +.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 46899999999999999999995 568999999997532 34567999999999999999999999985 34578
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
++||||++++ |.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||.+.
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPE--KRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTT--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEehhccCC-HHHHHHhCcc--cccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccc
Confidence 9999999876 6666654332 4589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCCCC--CCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhc
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLV--ATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT 534 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~ 534 (618)
......... ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||.... ..+.......
T Consensus 158 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~i~~ 227 (305)
T 2wtk_C 158 ALHPFAADD--TCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN--------IYKLFENIGK 227 (305)
T ss_dssp ECCTTCSSC--EECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHH
T ss_pred ccCcccccc--ccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch--------HHHHHHHHhc
Confidence 765322211 122344899999999987644 3779999999999999999999997532 1122222111
Q ss_pred CCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 535 NSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 535 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
... .+ .......+.+++.+||+.||.+|||++|+++.
T Consensus 228 ~~~-------~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 228 GSY-------AI----PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp CCC-------CC----CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CCC-------CC----CCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 110 01 11123456677889999999999999999864
No 208
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3.6e-40 Score=360.20 Aligned_cols=249 Identities=20% Similarity=0.308 Sum_probs=195.8
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
.++|++.+.||+|+||.||+|+.. ++..||+|++.... .....+.+|+.++++++||||+++++++.+.+..++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457999999999999999999964 78999999997532 34567899999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC---CceEEcccCcccc
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD---FEPKLSDFGLARL 457 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DfG~a~~ 457 (618)
||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.. +.+||+|||+++.
T Consensus 116 e~~~~g~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM----KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp ECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred ecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 9999999999886543 489999999999999999999999 99999999999999764 4599999999987
Q ss_pred cCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 458 MNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 458 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
...... .....||+.|+|||++. ..++.++||||+||++|+|++|+.||..... .+..........
T Consensus 189 ~~~~~~-----~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~i~~~~~ 254 (494)
T 3lij_A 189 FENQKK-----MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD--------QEILRKVEKGKY 254 (494)
T ss_dssp CBTTBC-----BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCC
T ss_pred CCCCcc-----ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCC
Confidence 654322 22345899999999886 4689999999999999999999999975432 111111111110
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. ...+. .......+.+++.+||+.||.+|||+.|+++
T Consensus 255 ~--~~~~~-----~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 255 T--FDSPE-----WKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp C--CCSGG-----GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred C--CCchh-----cccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 0 00000 0112345667777999999999999999985
No 209
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=6e-40 Score=336.97 Aligned_cols=251 Identities=23% Similarity=0.354 Sum_probs=197.8
Q ss_pred hhccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
..++|++.+.||+|+||.||+|... +|+.||+|++.... ..+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 3567999999999999999999964 58999999997643 346788999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++|+|.+++.... ..+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||.+.......
T Consensus 106 ~~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (314)
T 3com_A 106 CGAGSVSDIIRLRN---KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM 179 (314)
T ss_dssp CTTEEHHHHHHHHT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred CCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence 99999999986322 3589999999999999999999999 99999999999999999999999999998764432
Q ss_pred CcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAI 542 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 542 (618)
.. .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ............ .
T Consensus 180 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~-~--- 243 (314)
T 3com_A 180 AK----RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP--------MRAIFMIPTNPP-P--- 243 (314)
T ss_dssp SC----BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHHSCC-C---
T ss_pred cc----cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHhcCCC-c---
Confidence 21 1223489999999999998999999999999999999999999975321 111111111110 0
Q ss_pred cccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 543 DKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 543 d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.. .........+.+++.+||+.||.+|||+.|+++
T Consensus 244 --~~--~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 244 --TF--RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp --CC--SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --cc--CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 00 001112346777888999999999999999976
No 210
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.3e-40 Score=373.38 Aligned_cols=243 Identities=19% Similarity=0.231 Sum_probs=198.7
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC----ccCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeE
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS----QHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERL 377 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 377 (618)
..++|++.+.||+|+||.||+|.. .+++.||||+++.. ....+.+..|..++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 456899999999999999999995 46889999999753 23456678899999988 7999999999999999999
Q ss_pred EEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccc
Q 007088 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARL 457 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 457 (618)
+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++.
T Consensus 419 lV~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEEeCcCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 9999999999999997643 499999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 458 MNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 458 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+. .+.........
T Consensus 492 ~~~~~~~----~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~--------~~~~~~i~~~~- 558 (674)
T 3pfq_A 492 NIWDGVT----TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--------DELFQSIMEHN- 558 (674)
T ss_dssp CCCTTCC----BCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHSSC-
T ss_pred cccCCcc----cccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH--------HHHHHHHHhCC-
Confidence 4332222 2234599999999999999999999999999999999999999976432 12222221111
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCH
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTM 576 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 576 (618)
+ ..+.....++.+|+.+||+.||++||++
T Consensus 559 --------~--~~p~~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 559 --------V--AYPKSMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp --------C--CCCTTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred --------C--CCCccCCHHHHHHHHHHccCCHHHCCCC
Confidence 0 0111223456677779999999999997
No 211
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2e-40 Score=349.01 Aligned_cols=252 Identities=10% Similarity=-0.005 Sum_probs=179.9
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----cCHHHHHHHH---HHHhcCCCCCcccee-------EE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----HSEKEFLSEI---NTLGSVRHRNLVPLL-------GF 369 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~E~---~~l~~l~h~niv~l~-------~~ 369 (618)
..+|...+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|+ ..++. +||||++++ ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence 44688899999999999999995 478999999997743 2345577784 55556 799987754 55
Q ss_pred EEeC-----------------CeeEEEEeecCCCccccccCCCCCCCcCCCHHHH------HHHHHHHHHHHHHHHhCCC
Q 007088 370 CVAK-----------------KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLR------LRIAIGSARGLAWLHHNCN 426 (618)
Q Consensus 370 ~~~~-----------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~i~~~L~~LH~~~~ 426 (618)
+... ...++||||++ |+|.+++.... ..+.+..+ ..++.||+.||+|||++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~-- 213 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD---FVYVFRGDEGILALHILTAQLIRLAANLQSK-- 213 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH---HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc---cccchhhhhhhhhHHHHHHHHHHHHHHHHHC--
Confidence 5443 23799999998 89999997642 23455555 78889999999999999
Q ss_pred CCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCC--CCCCCccchHHHHHHHHH
Q 007088 427 PRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT--LVATPKGDVYSFGVVLLE 504 (618)
Q Consensus 427 ~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwS~Gvil~e 504 (618)
+|+||||||+|||++.++.+||+|||+++....... ...+|+.|+|||++.+ ..++.++|||||||++||
T Consensus 214 -~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~-------~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~e 285 (371)
T 3q60_A 214 -GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP-------ASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYR 285 (371)
T ss_dssp -TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEE-------GGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHH
T ss_pred -CCccCcCCHHHEEECCCCCEEEEecceeeecCCCcc-------CccCCcCCcChhhccCCCCCcCccccHHHHHHHHHH
Confidence 999999999999999999999999999987643211 1226799999999987 779999999999999999
Q ss_pred HHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 505 LITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 505 lltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
|++|+.||........... ........................+.+++.+||+.||++|||+.|+++
T Consensus 286 lltg~~Pf~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 286 VWCLFLPFGLVTPGIKGSW----------KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp HHHSSCSTTBCCTTCTTCC----------CBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred HHhCCCCCCCcCcccccch----------hhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 9999999986533211000 000000000111111111123456777778999999999999999974
No 212
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.9e-40 Score=342.94 Aligned_cols=256 Identities=22% Similarity=0.278 Sum_probs=191.3
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCC------
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK------ 374 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 374 (618)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46789999999999999999995 578999999996532 23456889999999999999999999997753
Q ss_pred eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCc
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGL 454 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 454 (618)
..++||||+ +++|.+++... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE-----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 459999999 78999988642 489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHh
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLN 533 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~ 533 (618)
++...... ....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...+..+ .+........
T Consensus 175 a~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~----~l~~i~~~~g 243 (367)
T 1cm8_A 175 ARQADSEM-------TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD----QLKEIMKVTG 243 (367)
T ss_dssp CEECCSSC-------CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHHC
T ss_pred cccccccc-------CcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHhcC
Confidence 98754321 23348999999998776 679999999999999999999999997643211 1111111000
Q ss_pred cCC----------ccchh-------ccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 534 TNS----------SLETA-------IDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 534 ~~~----------~~~~~-------~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
... ..... ....+ ..........+.+++.+||+.||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 244 TPPAEFVQRLQSDEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp CCCHHHHHTCSCHHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCHHHHHHhhhHHHHHHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 000 00000 00000 0011122345777788999999999999999876
No 213
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.8e-39 Score=335.06 Aligned_cols=259 Identities=19% Similarity=0.232 Sum_probs=202.8
Q ss_pred hccCCCCcEEeecCCeeEEEEEe--CCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCC------CccceeEEEEeCCee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML--PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHR------NLVPLLGFCVAKKER 376 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~~~~~~~ 376 (618)
.++|++.+.||+|+||.||+|.. .+++.||+|+++......+.+.+|++++++++|+ +++++++++...+..
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 35789999999999999999985 4689999999987665667788999999888655 499999999999999
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC-------------
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG------------- 443 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~------------- 443 (618)
++||||+ +++|.+++..... .++++..+..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~ 166 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGF--LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKR 166 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred EEEEcCC-CCCHHHHHHhcCC--CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcccc
Confidence 9999999 7899999876543 4589999999999999999999999 9999999999999987
Q ss_pred ------CCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCC
Q 007088 444 ------DFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNA 517 (618)
Q Consensus 444 ------~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~ 517 (618)
++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.
T Consensus 167 ~~~~~~~~~~kl~Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 239 (339)
T 1z57_A 167 DERTLINPDIKVVDFGSATYDDEHH-------STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS 239 (339)
T ss_dssp EEEEESCCCEEECCCSSCEETTSCC-------CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH
T ss_pred ccccccCCCceEeeCcccccCcccc-------ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh
Confidence 6689999999998654321 123489999999999999999999999999999999999999976432
Q ss_pred CCccccCHHHHHHHHhcCCc--------cchh---------------------cccc-ccCCCCHHHHHHHHHHHhhccC
Q 007088 518 PESFKGSLVEWITLLNTNSS--------LETA---------------------IDKS-LLGNGFDGELHQFLRVACNCVL 567 (618)
Q Consensus 518 ~~~~~~~l~~~~~~~~~~~~--------~~~~---------------------~d~~-l~~~~~~~~~~~l~~li~~cl~ 567 (618)
.+ .. ........... .... ..+. -...........+.+++.+||+
T Consensus 240 ~~----~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 314 (339)
T 1z57_A 240 KE----HL-AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLE 314 (339)
T ss_dssp HH----HH-HHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTC
T ss_pred HH----HH-HHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhC
Confidence 11 01 11110000000 0000 0000 0011123456788899999999
Q ss_pred CCCCCCCCHHHHHH
Q 007088 568 PTPKERHTMFEVYQ 581 (618)
Q Consensus 568 ~dP~~RPs~~evl~ 581 (618)
.||.+|||+.|+++
T Consensus 315 ~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 315 YDPAKRITLREALK 328 (339)
T ss_dssp SSTTTSCCHHHHTT
T ss_pred cCcccccCHHHHhc
Confidence 99999999999975
No 214
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=7.1e-40 Score=337.09 Aligned_cols=266 Identities=23% Similarity=0.344 Sum_probs=198.4
Q ss_pred HhhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 303 KATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 303 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
...++|++.+.||+|+||.||+|...+ .||+|+++... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 345789999999999999999999754 48999986432 2335577899999999999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++++|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++ ++.+||+|||+++...
T Consensus 108 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~ 180 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDAK---IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISG 180 (319)
T ss_dssp CBCCCSEEHHHHTTSSC---CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC---
T ss_pred eecccCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccc
Confidence 99999999999997654 3589999999999999999999999 999999999999998 6799999999987653
Q ss_pred CCCCc-ccccccCCCCcccccCCCCCCC---------CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHH
Q 007088 460 PVDTH-LSTFVNGEFGDLGYVAPEYPRT---------LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWI 529 (618)
Q Consensus 460 ~~~~~-~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~ 529 (618)
..... .........|++.|+|||.+.+ ..++.++||||||+++|||++|+.||..... ....
T Consensus 181 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--------~~~~ 252 (319)
T 2y4i_B 181 VLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA--------EAII 252 (319)
T ss_dssp -------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH--------HHHH
T ss_pred cccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHH
Confidence 22111 1111223348999999998764 4578899999999999999999999975321 1111
Q ss_pred HHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhhcCCCC
Q 007088 530 TLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAERYHFTT 594 (618)
Q Consensus 530 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 594 (618)
...... . .+...... ....+.+++.+||+.||++|||+.|+++.|+++.++.....
T Consensus 253 ~~~~~~-~-----~~~~~~~~---~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~~~ 308 (319)
T 2y4i_B 253 WQMGTG-M-----KPNLSQIG---MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLS 308 (319)
T ss_dssp HHHHTT-C-----CCCCCCSS---CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC--------
T ss_pred HHhccC-C-----CCCCCcCC---CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhccCC
Confidence 111111 0 11111111 12346777889999999999999999999999987755433
No 215
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=6.3e-40 Score=334.12 Aligned_cols=251 Identities=21% Similarity=0.322 Sum_probs=200.8
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc----------cCHHHHHHHHHHHhcCC-CCCccceeEEEE
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ----------HSEKEFLSEINTLGSVR-HRNLVPLLGFCV 371 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----------~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 371 (618)
..++|++.+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|++++++++ ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 356899999999999999999996 468999999996532 12356789999999995 999999999999
Q ss_pred eCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcc
Q 007088 372 AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSD 451 (618)
Q Consensus 372 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 451 (618)
..+..++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~d 167 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTD 167 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEec
Confidence 999999999999999999998754 3489999999999999999999999 999999999999999999999999
Q ss_pred cCcccccCCCCCcccccccCCCCcccccCCCCCC------CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCH
Q 007088 452 FGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPR------TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSL 525 (618)
Q Consensus 452 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l 525 (618)
||++......... ....|++.|+|||++. ...++.++||||||+++|||++|+.||.....
T Consensus 168 fg~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------- 234 (298)
T 1phk_A 168 FGFSCQLDPGEKL-----REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-------- 234 (298)
T ss_dssp CTTCEECCTTCCB-----CCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------
T ss_pred ccchhhcCCCccc-----ccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH--------
Confidence 9999876543221 2234899999999874 45688999999999999999999999975321
Q ss_pred HHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 526 VEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 526 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
............ .............+.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 235 MLMLRMIMSGNY-------QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHHHHHHTCC-------CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHHhcCCc-------ccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 111111111110 0000111223456778888999999999999999975
No 216
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=3.3e-40 Score=342.93 Aligned_cols=254 Identities=20% Similarity=0.296 Sum_probs=196.5
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCcc--CHHHHHHHHHH-HhcCCCCCccceeEEEEeCCeeEEE
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQH--SEKEFLSEINT-LGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
..++|++.+.||+|+||.||+|.. .+|+.||||+++.... ...++..|..+ ++.++||||+++++++.+.+..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 456788899999999999999995 6799999999976432 33455666665 7778999999999999999999999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++ +|.+++.........+++..++.++.||+.||+|||++. +|+||||||+||+++.++.+||+|||+++...
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 999975 998887643222256999999999999999999999732 89999999999999999999999999998764
Q ss_pred CCCCcccccccCCCCcccccCCCCCC----CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcC
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPR----TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN 535 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~ 535 (618)
.... .....||+.|+|||++. ...++.++|||||||++|||++|+.||...... . .........
T Consensus 206 ~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~------~-~~~~~~~~~ 273 (340)
T 3an0_A 206 DSVA-----KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP------F-QQLKQVVEE 273 (340)
T ss_dssp CHHH-----HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH------H-HHHHHHHHS
T ss_pred cccc-----cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch------H-HHHHHHhcC
Confidence 3211 11234899999999854 447899999999999999999999999753211 1 111111111
Q ss_pred CccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 536 SSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 536 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.. +... .......+.+++.+||+.||++||++.|+++
T Consensus 274 ~~------~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 274 PS------PQLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp CC------CCCC---GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CC------CCCC---cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 10 0000 1112346778888999999999999999986
No 217
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.1e-39 Score=341.16 Aligned_cols=255 Identities=22% Similarity=0.271 Sum_probs=190.8
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeCC------
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK------ 374 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 374 (618)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.++++++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 46799999999999999999995 468999999997532 33456889999999999999999999997665
Q ss_pred eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCc
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGL 454 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 454 (618)
..++||||+++ +|.+.+. ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp EEEEEEECCSE-EHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred ceEEEEEcCCC-CHHHHHh------hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 67999999975 7888774 2388999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhc
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT 534 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~ 534 (618)
++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. ..+......
T Consensus 174 a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------~~~~~i~~~ 241 (371)
T 2xrw_A 174 ARTAGTSFM-----MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI-------DQWNKVIEQ 241 (371)
T ss_dssp ---------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHC-
T ss_pred ccccccccc-----cCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHHH
Confidence 986643221 12234899999999999999999999999999999999999999764321 111111000
Q ss_pred ---------------------C-Cc-----cchhccccccCCC---CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 535 ---------------------N-SS-----LETAIDKSLLGNG---FDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 535 ---------------------~-~~-----~~~~~d~~l~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. .. ............. .......+.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 242 LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0 00 0000000000000 1123567888999999999999999999986
No 218
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.2e-39 Score=332.65 Aligned_cols=251 Identities=19% Similarity=0.268 Sum_probs=196.5
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccC-ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEEee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDS-QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 382 (618)
.++|++.+.||+|+||.||+|... +++.||+|++... ....+.+.+|++++++++||||+++++++...+..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 467899999999999999999965 5899999998654 34567899999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCC
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVD 462 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 462 (618)
+++++|.+++.... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~~l~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 171 (302)
T 2j7t_A 98 CPGGAVDAIMLELD---RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL 171 (302)
T ss_dssp CTTEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH
T ss_pred CCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccccc
Confidence 99999999886533 3489999999999999999999999 99999999999999999999999999875432111
Q ss_pred CcccccccCCCCcccccCCCCC-----CCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCc
Q 007088 463 THLSTFVNGEFGDLGYVAPEYP-----RTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSS 537 (618)
Q Consensus 463 ~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~ 537 (618)
. ......||+.|+|||++ .+..++.++||||||+++|||++|+.||..... ............
T Consensus 172 ~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~ 239 (302)
T 2j7t_A 172 Q----KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP--------MRVLLKIAKSDP 239 (302)
T ss_dssp H----C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHHSCC
T ss_pred c----ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH--------HHHHHHHhccCC
Confidence 0 11123489999999987 467789999999999999999999999975332 111111111111
Q ss_pred cchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 538 LETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 538 ~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.. . .........+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~-~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 240 PT-L-------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp CC-C-------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred cc-c-------CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00 0 001122345777888999999999999999865
No 219
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.1e-40 Score=350.18 Aligned_cols=261 Identities=23% Similarity=0.247 Sum_probs=190.6
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCe------eEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKE------RLL 378 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------~~l 378 (618)
..+|+..+.||+|+||.||+|+...+..||+|++...... ..+|++++++++||||+++++++...+. .++
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~---~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF---KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS---CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch---HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 3568999999999999999999877777898888553321 2369999999999999999999966443 789
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeC-CCCceEEcccCcccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLD-GDFEPKLSDFGLARL 457 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DfG~a~~ 457 (618)
||||++++ +.+.+.........+++..+..++.||++||+|||+. +|+||||||+|||++ .++.+||+|||+++.
T Consensus 116 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 116 VLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 99999874 4333321111124589999999999999999999999 999999999999999 799999999999987
Q ss_pred cCCCCCcccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcC-
Q 007088 458 MNPVDTHLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN- 535 (618)
Q Consensus 458 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~- 535 (618)
....... ....+|+.|+|||++.+. .++.++||||+||++|||++|+.||......+ .+..........
T Consensus 192 ~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~----~l~~i~~~~g~p~ 262 (394)
T 4e7w_A 192 LIAGEPN-----VSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID----QLVEIIKVLGTPS 262 (394)
T ss_dssp CCTTCCC-----CSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHHCCCC
T ss_pred ccCCCCC-----cccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCC
Confidence 6443322 123489999999988664 58999999999999999999999997643211 111111111000
Q ss_pred --------CccchhccccccCCC-----CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 536 --------SSLETAIDKSLLGNG-----FDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 536 --------~~~~~~~d~~l~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.......-+...... .......+.+++.+||+.||.+|||+.|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 263 REQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 000000000000000 0112346778888999999999999999975
No 220
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=9.7e-40 Score=333.30 Aligned_cols=264 Identities=28% Similarity=0.395 Sum_probs=184.9
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccC--ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDS--QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
..++|.+.+.||+|+||.||+|.. .+++.||+|++... ....+++.+|+.++++++||||+++++++...+..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 357899999999999999999994 57899999998653 234567889999999999999999999999999999999
Q ss_pred eecCCCccccccCCC----CCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 381 SYLENGTLYDKLHPA----EHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 381 e~~~~gsL~~~l~~~----~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
||+++|+|.+++... ......+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 999999999988631 11124589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCc-ccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhc
Q 007088 457 LMNPVDTH-LSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT 534 (618)
Q Consensus 457 ~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~ 534 (618)
........ .........||+.|+|||.+.+ ..++.++||||||+++|||++|+.||....... .. ......
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~---~~~~~~ 242 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK----VL---MLTLQN 242 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG----HH---HHHHTS
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh----HH---HHHhcc
Confidence 66432211 1111123348999999998865 568999999999999999999999997643211 11 111111
Q ss_pred CC-ccc-hhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 535 NS-SLE-TAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 535 ~~-~~~-~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.. ... ...+.... ......+.+++.+||+.||.+|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 243 DPPSLETGVQDKEML----KKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp SCCCTTC-----CCC----CCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCCccccccccchhh----hhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 10 000 00111111 112345677788999999999999999975
No 221
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=7.5e-40 Score=350.08 Aligned_cols=260 Identities=25% Similarity=0.268 Sum_probs=191.5
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEeCC------eeEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKK------ERLL 378 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~~l 378 (618)
.+|+..+.||+|+||.||+|+. .+|+.||||++..... ...+|++++++++||||+++++++.... ..++
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 4688899999999999999996 4689999999865432 2347999999999999999999986432 3579
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC-CceEEcccCcccc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD-FEPKLSDFGLARL 457 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfG~a~~ 457 (618)
||||+++ +|.+.+.........+++..++.++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+++.
T Consensus 131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~ 206 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206 (420)
T ss_dssp EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence 9999986 66665543222224699999999999999999999999 99999999999999965 5689999999987
Q ss_pred cCCCCCcccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhc--
Q 007088 458 MNPVDTHLSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT-- 534 (618)
Q Consensus 458 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~-- 534 (618)
....... ....||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+.+.......
T Consensus 207 ~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~----~~l~~i~~~lg~p~ 277 (420)
T 1j1b_A 207 LVRGEPN-----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV----DQLVEIIKVLGTPT 277 (420)
T ss_dssp CCTTCCC-----CSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCSCC
T ss_pred cccCCCc-----eeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCCC
Confidence 6543221 123489999999988764 7899999999999999999999999764321 112222211100
Q ss_pred -------CCccchhccccccCCC-----CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 535 -------NSSLETAIDKSLLGNG-----FDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 535 -------~~~~~~~~d~~l~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.....+...+.+.... .......+.+|+.+||+.||.+|||+.|+++
T Consensus 278 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 278 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 0000111111111110 0112356778888999999999999999975
No 222
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.6e-39 Score=331.41 Aligned_cols=255 Identities=23% Similarity=0.317 Sum_probs=193.7
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEe----------
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA---------- 372 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------- 372 (618)
..++|++.+.||+|+||.||+|+. .+++.||+|++.......+.+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 356799999999999999999995 578999999997665566788999999999999999999999865
Q ss_pred ---CCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEE
Q 007088 373 ---KKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKL 449 (618)
Q Consensus 373 ---~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 449 (618)
.+..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl 157 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSEN---LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKI 157 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSC---GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEE
T ss_pred cccCCceEEEEecCCCCCHHHhhhccc---cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEE
Confidence 356789999999999999997543 3578899999999999999999999 9999999999999999999999
Q ss_pred cccCcccccCCCCCc----------ccccccCCCCcccccCCCCCCCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCC
Q 007088 450 SDFGLARLMNPVDTH----------LSTFVNGEFGDLGYVAPEYPRTL-VATPKGDVYSFGVVLLELITGERPTHLTNAP 518 (618)
Q Consensus 450 ~DfG~a~~~~~~~~~----------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~ 518 (618)
+|||++......... .........||+.|+|||.+.+. .++.++||||||+++|||++ ||....
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~-- 232 (303)
T 1zy4_A 158 GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM-- 232 (303)
T ss_dssp CCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH--
T ss_pred eeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch--
Confidence 999999876432110 01112234589999999998764 68999999999999999998 543210
Q ss_pred CccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 519 ESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 519 ~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
............ ...+...........+.+++.+||+.||.+|||+.|+++
T Consensus 233 -----~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 233 -----ERVNILKKLRSV-------SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp -----HHHHHHHHHHST-------TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -----hHHHHHHhcccc-------ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 111111111111 011111122233455677888999999999999999976
No 223
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.8e-39 Score=341.66 Aligned_cols=264 Identities=19% Similarity=0.225 Sum_probs=200.1
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCC-----------CCCccceeEEEEeC
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR-----------HRNLVPLLGFCVAK 373 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~~~ 373 (618)
++|.+.+.||+|+||.||+|.. .+++.||+|++.......+.+.+|++++++++ |+||+++++++...
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~ 98 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 98 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence 5789999999999999999995 67899999999876666677889999998886 89999999999865
Q ss_pred C----eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeC------C
Q 007088 374 K----ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLD------G 443 (618)
Q Consensus 374 ~----~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~------~ 443 (618)
+ ..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||+++ +|+||||||+|||++ .
T Consensus 99 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 99 GPNGVHVVMVFEVL-GENLLALIKKYEH--RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp ETTEEEEEEEECCC-CEEHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTT
T ss_pred CCCCceEEEEEecC-CCCHHHHHHHhhc--cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcC
Confidence 4 789999999 8899999876443 35899999999999999999999953 899999999999994 4
Q ss_pred CCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccc-
Q 007088 444 DFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK- 522 (618)
Q Consensus 444 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~- 522 (618)
.+.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 174 ~~~~kl~Dfg~a~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 246 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDEHY-------TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246 (373)
T ss_dssp EEEEEECCCTTCEETTBCC-------CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred cceEEEcccccccccCCCC-------CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence 4589999999998764321 12348999999999999899999999999999999999999998644221110
Q ss_pred -cCHHHHHHHHhcC-----------------Cccchhccc----------cccCCCCHHHHHHHHHHHhhccCCCCCCCC
Q 007088 523 -GSLVEWITLLNTN-----------------SSLETAIDK----------SLLGNGFDGELHQFLRVACNCVLPTPKERH 574 (618)
Q Consensus 523 -~~l~~~~~~~~~~-----------------~~~~~~~d~----------~l~~~~~~~~~~~l~~li~~cl~~dP~~RP 574 (618)
..+.......... ......+.. .-...........+.+++.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence 0111111110000 000000000 001123456778899999999999999999
Q ss_pred CHHHHHH
Q 007088 575 TMFEVYQ 581 (618)
Q Consensus 575 s~~evl~ 581 (618)
|++|+++
T Consensus 327 t~~ell~ 333 (373)
T 1q8y_A 327 DAGGLVN 333 (373)
T ss_dssp CHHHHHT
T ss_pred CHHHHhh
Confidence 9999976
No 224
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.7e-39 Score=347.15 Aligned_cols=201 Identities=22% Similarity=0.293 Sum_probs=166.8
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeC-----Ce
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK-----KE 375 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 375 (618)
.++|.+.+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|++++++++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 46899999999999999999995 568999999997532 3346789999999999999999999999776 56
Q ss_pred eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcc
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLA 455 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 455 (618)
.|+||||++ |+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~----~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI----FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecCC-cCHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 899999986 59999987543 499999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcc------------------cccccCCCCcccccCCCCC-CCCCCCCccchHHHHHHHHHHHhCCCCCC
Q 007088 456 RLMNPVDTHL------------------STFVNGEFGDLGYVAPEYP-RTLVATPKGDVYSFGVVLLELITGERPTH 513 (618)
Q Consensus 456 ~~~~~~~~~~------------------~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDVwS~Gvil~elltG~~Pf~ 513 (618)
+......... ........||+.|+|||++ .+..++.++||||+||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 8765432110 0112345689999999975 56679999999999999999998655553
No 225
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=9.6e-40 Score=367.23 Aligned_cols=259 Identities=22% Similarity=0.302 Sum_probs=205.0
Q ss_pred HhhccCCCCcEEeecCCeeEEEEEeC----CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCee
Q 007088 303 KATNSFSKNNIIGTGRTGATYIAMLP----GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER 376 (618)
Q Consensus 303 ~~~~~y~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 376 (618)
...++|++.+.||+|+||.||+|... .+..||+|+++... ...+.+.+|+.++++++||||+++++++. .+..
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~ 465 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 465 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence 34567889999999999999999863 25689999987533 33467899999999999999999999984 4668
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 466 ~lv~E~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp EEEEECCTTCBHHHHHHHTT---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred EEEEEcCCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCe
Confidence 99999999999999997543 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhcC
Q 007088 457 LMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNTN 535 (618)
Q Consensus 457 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~~ 535 (618)
.......... ....+|+.|+|||.+.+..++.++|||||||++|||++ |..||..... .+........
T Consensus 540 ~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~--------~~~~~~i~~~ 608 (656)
T 2j0j_A 540 YMEDSTYYKA---SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--------NDVIGRIENG 608 (656)
T ss_dssp SCCC-------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHHT
T ss_pred ecCCCcceec---cCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH--------HHHHHHHHcC
Confidence 7654322111 12236789999999988899999999999999999997 9999975432 1111111111
Q ss_pred CccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 536 SSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 536 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
... ..+......+.+++.+||+.||++|||+.|+++.|+++.++
T Consensus 609 ~~~----------~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 609 ERL----------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp CCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCC----------CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 100 01122334677788899999999999999999999998754
No 226
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.8e-39 Score=338.27 Aligned_cols=263 Identities=22% Similarity=0.286 Sum_probs=198.9
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeC-----Ce
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK-----KE 375 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 375 (618)
..++|++.+.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|++++.+++||||+++++++... ..
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 356899999999999999999995 478899999997533 3346788999999999999999999999765 36
Q ss_pred eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcc
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLA 455 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 455 (618)
.++||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~iv~e~~~-~~L~~~l~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKTQ-----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp EEEEEECCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEcccC-cCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcce
Confidence 799999997 4999988543 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCCCCCC-CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhc
Q 007088 456 RLMNPVDTHLSTFVNGEFGDLGYVAPEYPR-TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT 534 (618)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~ 534 (618)
+......... .......||+.|+|||++. +..++.++|||||||++|||++|+.||......+. +....... .
T Consensus 176 ~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~----~~~i~~~~-~ 249 (364)
T 3qyz_A 176 RVADPDHDHT-GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ----LNHILGIL-G 249 (364)
T ss_dssp EECCGGGCBC-CTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGH----HHHHHHHH-C
T ss_pred EecCCCCCcc-ccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHH----HHHHHHHh-C
Confidence 8765432211 1123345899999999754 45589999999999999999999999976543221 11111110 0
Q ss_pred CCccc-----------hhccccc-cCCC-----CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 535 NSSLE-----------TAIDKSL-LGNG-----FDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 535 ~~~~~-----------~~~d~~l-~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..... ....... .... .......+.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp SCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000 0000000 0000 0112345778888999999999999999976
No 227
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.3e-40 Score=338.88 Aligned_cols=257 Identities=19% Similarity=0.251 Sum_probs=196.2
Q ss_pred HHHHHhhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCC--CCCccceeEEEEeC
Q 007088 299 SDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVR--HRNLVPLLGFCVAK 373 (618)
Q Consensus 299 ~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~ 373 (618)
..+....++|++.+.||+|+||.||++...+++.||+|++.... ...+.+.+|++++.+++ |+||+++++++.+.
T Consensus 21 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~ 100 (313)
T 3cek_A 21 QSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD 100 (313)
T ss_dssp CEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECS
T ss_pred eeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecC
Confidence 33344567899999999999999999998889999999996543 33467899999999997 59999999999999
Q ss_pred CeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccC
Q 007088 374 KERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFG 453 (618)
Q Consensus 374 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 453 (618)
+..++||| +.+++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||++++ +.+||+|||
T Consensus 101 ~~~~lv~e-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg 171 (313)
T 3cek_A 101 QYIYMVME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFG 171 (313)
T ss_dssp SEEEEEEC-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCS
T ss_pred CEEEEEEe-cCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeecc
Confidence 99999999 56789999987543 489999999999999999999999 9999999999999965 799999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCCCCCCC-----------CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccc
Q 007088 454 LARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-----------LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFK 522 (618)
Q Consensus 454 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~ 522 (618)
+++......... ......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||.....
T Consensus 172 ~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~----- 244 (313)
T 3cek_A 172 IANQMQPDTTSV--VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN----- 244 (313)
T ss_dssp SSCC----------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----
T ss_pred ccccccCccccc--cccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-----
Confidence 998765432211 1123348999999998765 4688899999999999999999999975321
Q ss_pred cCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 007088 523 GSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQL 582 (618)
Q Consensus 523 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 582 (618)
.. ........ ..............+.+++.+||+.||++||++.|+++.
T Consensus 245 -~~-~~~~~~~~---------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 245 -QI-SKLHAIID---------PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp -HH-HHHHHHHC---------TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -HH-HHHHHHHh---------cccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 11 11111111 111111111113456777789999999999999999863
No 228
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=4.8e-39 Score=339.80 Aligned_cols=203 Identities=23% Similarity=0.255 Sum_probs=173.1
Q ss_pred HhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCC-CC-----CccceeEEEEeCCe
Q 007088 303 KATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR-HR-----NLVPLLGFCVAKKE 375 (618)
Q Consensus 303 ~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~~ 375 (618)
...++|++.+.||+|+||.||+|.. .+++.||||+++.......++..|+.++..++ |+ +|+++++++...+.
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 3467899999999999999999995 46889999999876555667888998888875 44 49999999999999
Q ss_pred eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeC--CCCceEEcccC
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLD--GDFEPKLSDFG 453 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~~~kl~DfG 453 (618)
.++||||++ |+|.+++..... ..+++..+..++.|++.||.|||++ ..+|+||||||+|||++ .++.+||+|||
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG 206 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNF--RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFG 206 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred eEEEEecCC-CCHHHHHhhcCc--CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence 999999996 499999876543 3589999999999999999999952 12899999999999994 57889999999
Q ss_pred cccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 007088 454 LARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTN 516 (618)
Q Consensus 454 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~ 516 (618)
+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 207 ~a~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 207 SSCQLGQRI-------YQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp TCEETTCCC-------CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred Cceeccccc-------ccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 998764321 12348999999999999999999999999999999999999998643
No 229
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=5.8e-40 Score=338.81 Aligned_cols=263 Identities=21% Similarity=0.281 Sum_probs=197.1
Q ss_pred hhccCCCCcEEeecCCeeEEEEEe--CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcC---CCCCccceeEEEE----
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAML--PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSV---RHRNLVPLLGFCV---- 371 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~l~~~~~---- 371 (618)
+.++|++.+.||+|+||.||+|.. .+++.||+|+++... .....+.+|+.+++++ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 557899999999999999999996 468999999986432 1223466777776665 8999999999987
Q ss_pred -eCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEc
Q 007088 372 -AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLS 450 (618)
Q Consensus 372 -~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 450 (618)
.....++||||++ |+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 4567899999998 599999875443 3489999999999999999999999 99999999999999999999999
Q ss_pred ccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHH
Q 007088 451 DFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWIT 530 (618)
Q Consensus 451 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~ 530 (618)
|||+++...... ......||..|+|||++.+..++.++||||||+++|||++|+.||......+ .+.....
T Consensus 163 Dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~i~~ 233 (326)
T 1blx_A 163 DFGLARIYSFQM-----ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD----QLGKILD 233 (326)
T ss_dssp SCCSCCCCCGGG-----GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHH
T ss_pred cCcccccccCCC-----CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH----HHHHHHH
Confidence 999998654321 1223458999999999999899999999999999999999999997643211 1111111
Q ss_pred HHhcC---Cccc------hhccc---cccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 531 LLNTN---SSLE------TAIDK---SLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 531 ~~~~~---~~~~------~~~d~---~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
..... .+.. ..... .............+.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 234 VIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp HHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 11000 0000 00000 0000011122345667777999999999999999974
No 230
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.4e-39 Score=339.78 Aligned_cols=257 Identities=22% Similarity=0.292 Sum_probs=180.7
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEeC------C
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK------K 374 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 374 (618)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 46899999999999999999994 578999999996532 3346788999999999999999999999754 4
Q ss_pred eeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCc
Q 007088 375 ERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGL 454 (618)
Q Consensus 375 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 454 (618)
..++|+||+ +++|.+++... .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ-----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCEEEEECC-CEECC-----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---
T ss_pred eEEEEeccc-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 579999999 67999988652 489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHh
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLN 533 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~ 533 (618)
++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+..+ .+........
T Consensus 179 a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~----~l~~i~~~~g 247 (367)
T 2fst_X 179 ARHTADE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID----QLKLILRLVG 247 (367)
T ss_dssp -------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHC
T ss_pred ccccccc-------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhC
Confidence 9865432 122348999999998876 678999999999999999999999997643211 1111111100
Q ss_pred cCC----------ccchhccc--cccCCC----CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 534 TNS----------SLETAIDK--SLLGNG----FDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 534 ~~~----------~~~~~~d~--~l~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
... .....+.. ...... .......+.+|+.+||+.||++|||+.|+++
T Consensus 248 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 248 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp SCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 000 00000000 000000 0111345677888999999999999999975
No 231
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.2e-39 Score=336.20 Aligned_cols=252 Identities=19% Similarity=0.254 Sum_probs=172.3
Q ss_pred hccCCCCc-EEeecCCeeEEEEEeC-CCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEe----CCeeEE
Q 007088 305 TNSFSKNN-IIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA----KKERLL 378 (618)
Q Consensus 305 ~~~y~~~~-~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 378 (618)
.++|.+.+ .||+|+||.||+|... +++.||+|++.......+ .....++.++||||+++++++.. ....++
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 103 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ---EVDHHWQASGGPHIVCILDVYENMHHGKRCLLI 103 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHH---HHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHH---HHHHHHHhcCCCChHHHHHHHhhccCCCceEEE
Confidence 56788854 6999999999999965 689999999976432222 22333566799999999999976 445799
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC---CCceEEcccCcc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG---DFEPKLSDFGLA 455 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfG~a 455 (618)
||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++
T Consensus 104 v~e~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 104 IMECMEGGELFSRIQERGD--QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEECCTTEEHHHHHHTC-C--CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEeccCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 9999999999999976543 4699999999999999999999999 9999999999999976 455999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcC
Q 007088 456 RLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN 535 (618)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~ 535 (618)
+....... ....+|+.|+|||++.+..++.++||||||+++|+|++|+.||........... ..... ...
T Consensus 179 ~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~---~~~ 248 (336)
T 3fhr_A 179 KETTQNAL------QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG-MKRRI---RLG 248 (336)
T ss_dssp EEC----------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------
T ss_pred eecccccc------ccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh-HHHhh---hcc
Confidence 86543221 123479999999999888899999999999999999999999976443211100 00000 000
Q ss_pred CccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 536 SSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 536 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
...............+.+++.+||+.||.+|||++|+++
T Consensus 249 -------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 249 -------QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp ---------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -------ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 000011111223345677788999999999999999987
No 232
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.4e-38 Score=322.47 Aligned_cols=251 Identities=20% Similarity=0.287 Sum_probs=200.0
Q ss_pred HhhccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccC---ccCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEE
Q 007088 303 KATNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDS---QHSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 303 ~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 378 (618)
...++|++.+.||+|+||.||+|... +++.||+|++... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 34578999999999999999999964 7899999998653 2456789999999999999999999999999999999
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC---CceEEcccCcc
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD---FEPKLSDFGLA 455 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DfG~a 455 (618)
||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.+ +.+||+|||++
T Consensus 99 v~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 99 VGELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEccCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 999999999998886543 489999999999999999999999 99999999999999754 46999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcC
Q 007088 456 RLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN 535 (618)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~ 535 (618)
.......... ...+|+.|+|||.+.+ .++.++||||||+++|+|++|+.||..... ..........
T Consensus 172 ~~~~~~~~~~-----~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~~~ 237 (287)
T 2wei_A 172 TCFQQNTKMK-----DRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--------YDILKRVETG 237 (287)
T ss_dssp GTBCCCSSCS-----CHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHC
T ss_pred eeecCCCccc-----cccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcC
Confidence 8765432211 1237889999998875 489999999999999999999999975321 1111111111
Q ss_pred CccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 536 SSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 536 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.... +. .........+.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~~---~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 238 KYAF---DL----PQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CCCC---CS----GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCC---Cc----hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 1000 00 000112345677788999999999999999987
No 233
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.9e-39 Score=341.28 Aligned_cols=205 Identities=22% Similarity=0.318 Sum_probs=156.1
Q ss_pred ccCCC-CcEEeecCCeeEEEEEeC---CCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEEEe--CCeeEEE
Q 007088 306 NSFSK-NNIIGTGRTGATYIAMLP---GGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFCVA--KKERLLV 379 (618)
Q Consensus 306 ~~y~~-~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lV 379 (618)
+.|++ .++||+|+||.||+|+.. +++.||+|++..... ...+.+|+.++++++||||+++++++.. ....++|
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 34555 558999999999999964 578999999976543 3468899999999999999999999965 5688999
Q ss_pred EeecCCCccccccCCCC-----CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee----CCCCceEEc
Q 007088 380 YSYLENGTLYDKLHPAE-----HEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL----DGDFEPKLS 450 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~ 450 (618)
|||+++ +|.+++.... .....+++..++.++.||+.||+|||+. +|+||||||+|||+ +.++.+||+
T Consensus 99 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~ 174 (405)
T 3rgf_A 99 FDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIA 174 (405)
T ss_dssp EECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred EeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence 999975 8877765321 1123599999999999999999999999 99999999999999 778899999
Q ss_pred ccCcccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 007088 451 DFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTN 516 (618)
Q Consensus 451 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~ 516 (618)
|||+++........ ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 175 Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 240 (405)
T 3rgf_A 175 DMGFARLFNSPLKP-LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240 (405)
T ss_dssp CTTCCC-----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred ECCCceecCCCCcc-cccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence 99999876542211 111223458999999998877 458999999999999999999999997644
No 234
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=8.9e-39 Score=333.79 Aligned_cols=264 Identities=20% Similarity=0.252 Sum_probs=195.3
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeC-----Cee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAK-----KER 376 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 376 (618)
.++|.+.+.||+|+||.||+|... +|+.||||++.... .....+.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 467899999999999999999964 68999999996533 3345688999999999999999999998764 578
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
++||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 90 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ-----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLAR 160 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEeccC-ccHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence 99999997 5999888642 489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCccc------ccccCCCCcccccCCCCCC-CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHH
Q 007088 457 LMNPVDTHLS------TFVNGEFGDLGYVAPEYPR-TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWI 529 (618)
Q Consensus 457 ~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~-~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~ 529 (618)
.......... .......||+.|+|||++. +..++.++|||||||++|||++|+.||......+ .+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~ 236 (353)
T 2b9h_A 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH----QLLLIF 236 (353)
T ss_dssp ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHH
T ss_pred ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH----HHHHHH
Confidence 7654221111 0112345899999999765 4678999999999999999999999997643210 011111
Q ss_pred HHHhcCC---ccc--------hhccc--cccCC----CCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 530 TLLNTNS---SLE--------TAIDK--SLLGN----GFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 530 ~~~~~~~---~~~--------~~~d~--~l~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
....... ... +.+.. ..... ........+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000 000 00000 00000 00112345677888999999999999999976
No 235
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1e-38 Score=335.89 Aligned_cols=256 Identities=20% Similarity=0.275 Sum_probs=193.0
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCcc---CHHHHHHHHHHHhcCCCCCccceeEEEEeCCee----
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQH---SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKER---- 376 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 376 (618)
.++|...+.||+|+||.||+|.. .+|+.||+|++..... ..+.+.+|+.++++++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 46788999999999999999995 5689999999976432 346788999999999999999999999877654
Q ss_pred --EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCc
Q 007088 377 --LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGL 454 (618)
Q Consensus 377 --~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 454 (618)
++||||+. ++|.+++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 121 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG------MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEEcccc-ccHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999997 58888774 2389999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHh
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLN 533 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~ 533 (618)
++...... ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ .+........
T Consensus 191 a~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~i~~~~~ 259 (371)
T 4exu_A 191 ARHADAEM-------TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD----QLTQILKVTG 259 (371)
T ss_dssp C---------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHC
T ss_pred ccccccCc-------CCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHHHhC
Confidence 98654321 22347999999998876 788999999999999999999999997643211 1111111000
Q ss_pred cCCc----------cchhccc--cccCCC----CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 534 TNSS----------LETAIDK--SLLGNG----FDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 534 ~~~~----------~~~~~d~--~l~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.... ....... ...... .......+.+++.+||+.||++|||++|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 260 VPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp CCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 0000 0000000 000000 0112356778888999999999999999975
No 236
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=7.2e-39 Score=343.93 Aligned_cols=255 Identities=20% Similarity=0.223 Sum_probs=187.2
Q ss_pred cCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEEEeecCC
Q 007088 307 SFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|++++.++ +||||+++++++.+.+..++||||+.
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~--~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~- 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN- 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG--GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH--HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence 34456889999999998877778999999998653 245678999999876 89999999999999999999999996
Q ss_pred CccccccCCCCCCCcC---CCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCC-------------CceEE
Q 007088 386 GTLYDKLHPAEHEVMH---MDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGD-------------FEPKL 449 (618)
Q Consensus 386 gsL~~~l~~~~~~~~~---l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-------------~~~kl 449 (618)
|+|.+++......... .++..++.++.||+.||+|||+. +|+||||||+|||++.+ +.+||
T Consensus 93 gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL 169 (434)
T 2rio_A 93 LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 169 (434)
T ss_dssp EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEE
T ss_pred CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEE
Confidence 6999999765432111 13345678999999999999999 99999999999999654 48999
Q ss_pred cccCcccccCCCCCcccccccCCCCcccccCCCCCCC-------CCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCcc
Q 007088 450 SDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-------LVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESF 521 (618)
Q Consensus 450 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~ 521 (618)
+|||+++.................||+.|+|||++.+ ..++.++|||||||++|||++ |+.||......
T Consensus 170 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--- 246 (434)
T 2rio_A 170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR--- 246 (434)
T ss_dssp CCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH---
T ss_pred cccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh---
Confidence 9999999876543222222233458999999998865 678999999999999999999 99999653221
Q ss_pred ccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 522 KGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 522 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
...... ..... +.............+.+++.+||+.||.+|||+.|+++
T Consensus 247 ---~~~i~~---~~~~~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 247 ---ESNIIR---GIFSL-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp ---HHHHHH---TCCCC-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---HHHHhc---CCCCc-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 011111 11000 01111123445677888999999999999999999975
No 237
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.7e-38 Score=331.53 Aligned_cols=259 Identities=17% Similarity=0.181 Sum_probs=199.3
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-C-CcEEEEEEeccCccCHHHHHHHHHHHhcCCCCC------ccceeEEEEeCCee
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-G-GCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRN------LVPLLGFCVAKKER 376 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~~ 376 (618)
.++|++.+.||+|+||.||+|... + ++.||+|+++......+.+.+|+.++++++|++ ++.+++++...+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 367999999999999999999953 3 479999999876666677889999999987655 89999999999999
Q ss_pred EEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeee---------------
Q 007088 377 LLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILL--------------- 441 (618)
Q Consensus 377 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll--------------- 441 (618)
++||||+ ++++.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+|||+
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNF--QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred EEEEecc-CCChHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccccc
Confidence 9999999 5577776654432 4589999999999999999999999 99999999999999
Q ss_pred ----CCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCC
Q 007088 442 ----DGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNA 517 (618)
Q Consensus 442 ----~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~ 517 (618)
+.++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDHEHH-------TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN 244 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETTSCC-------CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred cccccCCCcEEEeecCccccccccc-------cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence 567899999999998654322 123489999999999999999999999999999999999999976432
Q ss_pred CCccccCHHHHHHHHhcCC---------ccchhcccc---------------------ccCCCCHHHHHHHHHHHhhccC
Q 007088 518 PESFKGSLVEWITLLNTNS---------SLETAIDKS---------------------LLGNGFDGELHQFLRVACNCVL 567 (618)
Q Consensus 518 ~~~~~~~l~~~~~~~~~~~---------~~~~~~d~~---------------------l~~~~~~~~~~~l~~li~~cl~ 567 (618)
.+ .+ .......... ......... ........+...+.+++.+||+
T Consensus 245 ~~----~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 319 (355)
T 2eu9_A 245 RE----HL-VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLE 319 (355)
T ss_dssp HH----HH-HHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTC
T ss_pred HH----HH-HHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhc
Confidence 11 01 1111100000 000000000 0001123445678899999999
Q ss_pred CCCCCCCCHHHHHH
Q 007088 568 PTPKERHTMFEVYQ 581 (618)
Q Consensus 568 ~dP~~RPs~~evl~ 581 (618)
.||++|||+.|+++
T Consensus 320 ~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 320 FDPAQRITLAEALL 333 (355)
T ss_dssp SSTTTSCCHHHHTT
T ss_pred CChhhCcCHHHHhc
Confidence 99999999999964
No 238
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=328.05 Aligned_cols=263 Identities=20% Similarity=0.272 Sum_probs=188.6
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCCCccceeEEEE-----------
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHRNLVPLLGFCV----------- 371 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~----------- 371 (618)
.++|.+.+.||+|+||.||+|... +++.||+|++.... ...+++.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 357889999999999999999965 58999999986543 34567899999999999999999999874
Q ss_pred ---eCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeC-CCCce
Q 007088 372 ---AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLD-GDFEP 447 (618)
Q Consensus 372 ---~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~ 447 (618)
+.+..++||||++ |+|.+++... .+++..++.++.|++.||+|||++ +|+||||||+||+++ .++.+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG-----PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC-----CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeE
Confidence 3457899999998 5999998642 489999999999999999999999 999999999999997 56799
Q ss_pred EEcccCcccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHH
Q 007088 448 KLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLV 526 (618)
Q Consensus 448 kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~ 526 (618)
||+|||+++......... .......+|..|+|||.+.+ ..++.++||||||+++|||++|+.||......+ .+.
T Consensus 161 kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~----~~~ 235 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYSHK-GHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE----QMQ 235 (320)
T ss_dssp EECCCTTCBCC---------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHH
T ss_pred EEccCccccccCCCcccc-cccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH----HHH
Confidence 999999998764322111 11122336889999997754 678999999999999999999999997643211 011
Q ss_pred HHHHHHhcC---------CccchhccccccCC-C-----CHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 527 EWITLLNTN---------SSLETAIDKSLLGN-G-----FDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 527 ~~~~~~~~~---------~~~~~~~d~~l~~~-~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
......... ......+....... . .......+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 236 LILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 111000000 00000000000000 0 0112346777888999999999999999976
No 239
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.3e-38 Score=328.98 Aligned_cols=255 Identities=21% Similarity=0.275 Sum_probs=176.0
Q ss_pred ccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHH-HHhcCCCCCccceeEEEEeCCeeEEEEe
Q 007088 306 NSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEIN-TLGSVRHRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~e 381 (618)
++|...+.||+|+||.||+|.. .+|+.||+|+++... ....++..|+. +++.++||||+++++++.+.+..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 6788899999999999999996 478999999997643 23345566666 6777899999999999999999999999
Q ss_pred ecCCCccccccCCCC-CCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 382 YLENGTLYDKLHPAE-HEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 382 ~~~~gsL~~~l~~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
|+++ +|.+++.... .....+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||+++....
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 9985 7777765211 01245899999999999999999999852 799999999999999999999999999987643
Q ss_pred CCCcccccccCCCCcccccCCCCC----CCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCC
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYP----RTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNS 536 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~ 536 (618)
.... ....||+.|+|||++ .+..++.++||||||+++|||++|+.||....... +...
T Consensus 179 ~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-------~~~~------ 240 (327)
T 3aln_A 179 SIAK-----TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-------DQLT------ 240 (327)
T ss_dssp --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------C------
T ss_pred cccc-----ccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-------HHHH------
Confidence 3211 122489999999998 46678999999999999999999999997532210 0000
Q ss_pred ccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 537 SLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 537 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.......+.+...........+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 241 QVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 000000111111111123346777888999999999999999976
No 240
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=9.7e-38 Score=326.15 Aligned_cols=256 Identities=19% Similarity=0.269 Sum_probs=193.1
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCcc---CHHHHHHHHHHHhcCCCCCccceeEEEEeCCe-----
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQH---SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKE----- 375 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 375 (618)
.++|...+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|+.++++++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 35788899999999999999995 5689999999975432 24568899999999999999999999987654
Q ss_pred -eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCc
Q 007088 376 -RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGL 454 (618)
Q Consensus 376 -~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 454 (618)
.++||||++ |+|.+++.. .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEecccc-CCHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999997 589888742 389999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCCCC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHh
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRT-LVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLN 533 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~ 533 (618)
++...... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ .+........
T Consensus 173 ~~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~----~~~~i~~~~~ 241 (353)
T 3coi_A 173 ARHADAEM-------TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD----QLTQILKVTG 241 (353)
T ss_dssp TTC---------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH----HHHHHHHHHC
T ss_pred ccCCCCCc-------cccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhC
Confidence 98654321 12347999999998876 678999999999999999999999997643211 1111111000
Q ss_pred cCC-----cc-----chh---ccccc---cCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 534 TNS-----SL-----ETA---IDKSL---LGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 534 ~~~-----~~-----~~~---~d~~l---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
... .. ... +.... ...........+.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 242 VPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp BCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000 00 000 00000 00111223456777888999999999999999975
No 241
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.6e-39 Score=329.48 Aligned_cols=244 Identities=19% Similarity=0.264 Sum_probs=187.6
Q ss_pred HHHHhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCcc-------CHHHHHHHHHHHhcC----CCCCcccee
Q 007088 300 DLMKATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQH-------SEKEFLSEINTLGSV----RHRNLVPLL 367 (618)
Q Consensus 300 ~l~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-------~~~~~~~E~~~l~~l----~h~niv~l~ 367 (618)
+.....++|++.+.||+|+||.||+|.. .+++.||+|++..... ....+.+|+.++.++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 3444567899999999999999999985 5789999999965432 223356788888888 899999999
Q ss_pred EEEEeCCeeEEEEee-cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeC-CCC
Q 007088 368 GFCVAKKERLLVYSY-LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLD-GDF 445 (618)
Q Consensus 368 ~~~~~~~~~~lV~e~-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~ 445 (618)
+++...+..++|||| +++++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++ .++
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 177 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEKG----PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRG 177 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTT
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCC
Confidence 999999999999999 78999999997543 489999999999999999999999 999999999999999 889
Q ss_pred ceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCC-CccchHHHHHHHHHHHhCCCCCCCCCCCCccccC
Q 007088 446 EPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVAT-PKGDVYSFGVVLLELITGERPTHLTNAPESFKGS 524 (618)
Q Consensus 446 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~ 524 (618)
.+||+|||+++....... ....|+..|+|||++.+..+. .++||||||+++|||++|+.||....
T Consensus 178 ~~kl~dfg~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------- 243 (312)
T 2iwi_A 178 CAKLIDFGSGALLHDEPY------TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------- 243 (312)
T ss_dssp EEEECCCSSCEECCSSCB------CCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--------
T ss_pred eEEEEEcchhhhcccCcc------cccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH--------
Confidence 999999999987654321 223489999999988766654 58999999999999999999996421
Q ss_pred HHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 525 LVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 525 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
+... .... + .......+.+++.+||+.||++|||++|+++
T Consensus 244 --~~~~---~~~~--------~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 244 --EILE---AELH--------F----PAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp --HHHH---TCCC--------C----CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred --HHhh---hccC--------C----cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1000 0000 0 1112345677788999999999999999975
No 242
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=6.9e-39 Score=330.24 Aligned_cols=242 Identities=20% Similarity=0.287 Sum_probs=195.5
Q ss_pred HHhhccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCcc-------CHHHHHHHHHHHhcCC--CCCccceeEEEE
Q 007088 302 MKATNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQH-------SEKEFLSEINTLGSVR--HRNLVPLLGFCV 371 (618)
Q Consensus 302 ~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-------~~~~~~~E~~~l~~l~--h~niv~l~~~~~ 371 (618)
....++|++.+.||+|+||.||+|.. .+++.||+|++..... ..+.+.+|+.++++++ |+||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 33457899999999999999999984 5789999999965421 2245678999999996 599999999999
Q ss_pred eCCeeEEEEeecCC-CccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeC-CCCceEE
Q 007088 372 AKKERLLVYSYLEN-GTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLD-GDFEPKL 449 (618)
Q Consensus 372 ~~~~~~lV~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl 449 (618)
..+..++||||+.+ ++|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++ +++.+||
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL 191 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITER----GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKL 191 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEE
T ss_pred cCCcEEEEEEcCCCCccHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEE
Confidence 99999999999976 8999998754 3489999999999999999999999 999999999999999 7889999
Q ss_pred cccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHH
Q 007088 450 SDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVA-TPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEW 528 (618)
Q Consensus 450 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~ 528 (618)
+|||+++....... ....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.... ..
T Consensus 192 ~Dfg~~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----------~~ 255 (320)
T 3a99_A 192 IDFGSGALLKDTVY------TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----------EI 255 (320)
T ss_dssp CCCTTCEECCSSCB------CCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----------HH
T ss_pred eeCccccccccccc------cCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh----------hh
Confidence 99999987654221 12348999999998876665 678999999999999999999996421 10
Q ss_pred HHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 529 ITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 529 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
. ..... .... ....+.+++.+||+.||++|||++|+++
T Consensus 256 ~---~~~~~---------~~~~---~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 256 I---RGQVF---------FRQR---VSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp H---HCCCC---------CSSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred h---ccccc---------cccc---CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 00000 0111 2245667777999999999999999976
No 243
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.8e-38 Score=334.41 Aligned_cols=251 Identities=20% Similarity=0.238 Sum_probs=186.1
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEEEeec
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVYSYL 383 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~ 383 (618)
..+|...+.||+|+||+||.....+++.||||++..... ..+.+|+++++++ +||||+++++++.+.+..++||||+
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~--~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF--SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE--EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH--HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 346888899999999997766667899999999965432 2356899999999 7999999999999999999999999
Q ss_pred CCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC-----CCceEEcccCccccc
Q 007088 384 ENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG-----DFEPKLSDFGLARLM 458 (618)
Q Consensus 384 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-----~~~~kl~DfG~a~~~ 458 (618)
+ |+|.+++..... ...+..++.++.||+.||+|||+. +|+||||||+|||++. ...+||+|||+++..
T Consensus 101 ~-g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~ 173 (432)
T 3p23_A 101 A-ATLQEYVEQKDF---AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173 (432)
T ss_dssp S-EEHHHHHHSSSC---CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred C-CCHHHHHHhcCC---CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence 6 599999876542 244455678999999999999999 9999999999999943 346889999999876
Q ss_pred CCCCCcccccccCCCCcccccCCCCCC---CCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCCccccCHHHHHHHHhc
Q 007088 459 NPVDTHLSTFVNGEFGDLGYVAPEYPR---TLVATPKGDVYSFGVVLLELIT-GERPTHLTNAPESFKGSLVEWITLLNT 534 (618)
Q Consensus 459 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwS~Gvil~ellt-G~~Pf~~~~~~~~~~~~l~~~~~~~~~ 534 (618)
....... .......||+.|+|||++. ...++.++|||||||++|||++ |..||..... ........
T Consensus 174 ~~~~~~~-~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~---------~~~~~~~~ 243 (432)
T 3p23_A 174 AVGRHSF-SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ---------RQANILLG 243 (432)
T ss_dssp -------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT---------HHHHHHTT
T ss_pred cCCCcce-eeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH---------HHHHHHhc
Confidence 5432111 1122345899999999987 4567889999999999999999 9999854321 11111111
Q ss_pred CCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 535 NSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 535 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
.... ... .........+.+++.+||+.||.+|||+.|+++
T Consensus 244 ~~~~-~~~------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 244 ACSL-DCL------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp CCCC-TTS------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cCCc-ccc------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 1110 000 011233455678888999999999999999983
No 244
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=5.1e-38 Score=322.94 Aligned_cols=250 Identities=20% Similarity=0.287 Sum_probs=176.2
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCccC--H-HHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQHS--E-KEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~-~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
.++|+..+.||+|+||.||+|... +|+.||+|++...... . +.+..+..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 457888999999999999999964 7899999999764322 2 23444555688889999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHh-CCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHH-NCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
||+ ++.+..+..... ..+++..+..++.|++.||.|||+ . +|+||||||+||+++.++.+||+|||++....
T Consensus 104 e~~-~~~~~~l~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQ---GPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp CCC-SEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred ecc-CCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 999 445544443222 358999999999999999999998 6 89999999999999999999999999997654
Q ss_pred CCCCcccccccCCCCcccccCCCCCC-----CCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhc
Q 007088 460 PVDTHLSTFVNGEFGDLGYVAPEYPR-----TLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT 534 (618)
Q Consensus 460 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~ 534 (618)
..... ....||+.|+|||++. ...++.++||||||+++|||++|+.||..... ..........
T Consensus 177 ~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~ 244 (318)
T 2dyl_A 177 DDKAK-----DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT-------DFEVLTKVLQ 244 (318)
T ss_dssp ---------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS-------HHHHHHHHHH
T ss_pred CCccc-----cccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc-------cHHHHHHHhc
Confidence 42221 1234899999999984 56788999999999999999999999975321 1111111111
Q ss_pred CCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 535 NSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 535 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
... +.+.. .......+.+++.+||+.||.+||+++|+++
T Consensus 245 ~~~------~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 245 EEP------PLLPG--HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp SCC------CCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cCC------CCCCc--cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 110 00000 0112245667777999999999999999976
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=4.6e-38 Score=348.06 Aligned_cols=268 Identities=23% Similarity=0.280 Sum_probs=201.8
Q ss_pred hccCCCCcEEeecCCeeEEEEEe-CCCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEe------CCe
Q 007088 305 TNSFSKNNIIGTGRTGATYIAML-PGGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVA------KKE 375 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 375 (618)
.++|++.+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 36899999999999999999995 568999999987542 335678999999999999999999999765 567
Q ss_pred eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCc---eEEccc
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFE---PKLSDF 452 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Df 452 (618)
.++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~-~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFEN-CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSC-TTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred EEEEEEeCCCCCHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccc
Confidence 8999999999999999976442 23588999999999999999999999 9999999999999997665 999999
Q ss_pred CcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHH
Q 007088 453 GLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLL 532 (618)
Q Consensus 453 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~ 532 (618)
|.+......... ....||+.|+|||.+.+..++.++||||||+++|||++|+.||...... ..|....
T Consensus 169 G~a~~~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-------~~~~~~i 236 (676)
T 3qa8_A 169 GYAKELDQGELC-----TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-------VQWHGKV 236 (676)
T ss_dssp CCCCBTTSCCCC-----CCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-------HHSSTTC
T ss_pred cccccccccccc-----ccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-------hhhhhhh
Confidence 999876543221 2234899999999999999999999999999999999999999753211 1110000
Q ss_pred hcCCc----cchhc------ccc--ccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHH-----HHHHHHHhhh
Q 007088 533 NTNSS----LETAI------DKS--LLGNGFDGELHQFLRVACNCVLPTPKERHTMFE-----VYQLLRAIAE 588 (618)
Q Consensus 533 ~~~~~----~~~~~------d~~--l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e-----vl~~L~~i~~ 588 (618)
..... ..+.. ... ............+.+++.+||+.||++|||+.| ..+.++++.+
T Consensus 237 ~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 237 REKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp C------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred hcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 00000 00000 000 011123345677888888999999999999988 5666766654
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=9.5e-37 Score=308.92 Aligned_cols=231 Identities=13% Similarity=0.080 Sum_probs=182.3
Q ss_pred ccCCCCcEEeecCCeeEEEEEeC-CCcEEEEEEeccCcc----CHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEEE
Q 007088 306 NSFSKNNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQH----SEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 306 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 380 (618)
++|++.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|+..+.+++||||+++++++.+.+..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 57999999999999999999964 589999999976532 2367899999999999999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||+++++|.+++... ....++.+++.|++.||+|||++ +|+||||||+|||++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred EecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-------
Confidence 999999999999532 35567889999999999999999 99999999999999999999998443
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccch
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLET 540 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 540 (618)
|++| ++.++|||||||++|||++|+.||......+........ . ...
T Consensus 175 -----------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~----~--~~~--- 221 (286)
T 3uqc_A 175 -----------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERD----T--AGQ--- 221 (286)
T ss_dssp -----------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBC----T--TSC---
T ss_pred -----------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHH----h--ccC---
Confidence 3333 578999999999999999999999865432211000000 0 000
Q ss_pred hccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhhhh
Q 007088 541 AIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFEVYQLLRAIAER 589 (618)
Q Consensus 541 ~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 589 (618)
.....-. .......+.+++.+||+.||++| |+.|+++.|+++...
T Consensus 222 ~~~~~~~---~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 222 PIEPADI---DRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp BCCHHHH---CTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred CCChhhc---ccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 0000000 01123456777889999999999 999999999998654
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.7e-37 Score=348.27 Aligned_cols=239 Identities=20% Similarity=0.285 Sum_probs=192.2
Q ss_pred hccCCCCcEEeecCCeeEEEEEeC--CCcEEEEEEeccCc--cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCe-----
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLP--GGCFIMIKRLEDSQ--HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKE----- 375 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 375 (618)
.++|++.+.||+|+||.||+|... +++.||||++.... .....+.+|+.++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 368999999999999999999964 68999999986533 334568899999999999999999999987665
Q ss_pred eEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcc
Q 007088 376 RLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLA 455 (618)
Q Consensus 376 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 455 (618)
.|+||||+++++|.+++.. .+++..++.++.||+.||.|||++ +|+||||||+|||++.+ .+||+|||++
T Consensus 159 ~~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a 228 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAV 228 (681)
T ss_dssp EEEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred eEEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccc
Confidence 6999999999999987753 489999999999999999999999 99999999999999986 8999999999
Q ss_pred cccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcC
Q 007088 456 RLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTN 535 (618)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~ 535 (618)
+..... ....||+.|+|||++.+. ++.++|||||||++|||++|..||.........
T Consensus 229 ~~~~~~--------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~-------------- 285 (681)
T 2pzi_A 229 SRINSF--------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLP-------------- 285 (681)
T ss_dssp EETTCC--------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCC--------------
T ss_pred hhcccC--------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccccc--------------
Confidence 876543 123489999999988665 488999999999999999999887642111000
Q ss_pred CccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHhh
Q 007088 536 SSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERH-TMFEVYQLLRAIA 587 (618)
Q Consensus 536 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~i~ 587 (618)
...........+.+++.+||+.||++|| +++++...|..+.
T Consensus 286 -----------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 286 -----------EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp -----------TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred -----------ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 0000112234677888899999999999 5667777777654
No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3.4e-37 Score=328.72 Aligned_cols=242 Identities=15% Similarity=0.146 Sum_probs=178.9
Q ss_pred hhccCCCCcEEeecCCeeEEEEE-eCCCcEEEEEEeccCc----cCHHHHHHHHHHHhcCCC-CCc---------cceeE
Q 007088 304 ATNSFSKNNIIGTGRTGATYIAM-LPGGCFIMIKRLEDSQ----HSEKEFLSEINTLGSVRH-RNL---------VPLLG 368 (618)
Q Consensus 304 ~~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h-~ni---------v~l~~ 368 (618)
.+..|...+.||+|+||.||+|. ..+|+.||||++.... ...+.+.+|+.+++.++| +|. +...+
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 34567778999999999999999 5579999999997332 235678999999999987 321 11111
Q ss_pred E------------EEe-----CCeeEEEEeecCCCccccccCCC---CCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 007088 369 F------------CVA-----KKERLLVYSYLENGTLYDKLHPA---EHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPR 428 (618)
Q Consensus 369 ~------------~~~-----~~~~~lV~e~~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ 428 (618)
. +.. ....+++|+++ +++|.+++... ......+++..++.++.||++||+|||++ +
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 231 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 231 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 1 111 12356777765 57999888411 11124588899999999999999999999 9
Q ss_pred ceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCC----------CCCCCCCccchHHH
Q 007088 429 IIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYP----------RTLVATPKGDVYSF 498 (618)
Q Consensus 429 ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~sDVwS~ 498 (618)
|+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||
T Consensus 232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSl 303 (413)
T 3dzo_A 232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTL 303 (413)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTEE-------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHH
T ss_pred cccCCcccceEEEecCCeEEEEeccceeecCCc-------cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHH
Confidence 999999999999999999999999999865432 223347 999999998 66678899999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhcCCccchhccccccCCCCHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 007088 499 GVVLLELITGERPTHLTNAPESFKGSLVEWITLLNTNSSLETAIDKSLLGNGFDGELHQFLRVACNCVLPTPKERHTMFE 578 (618)
Q Consensus 499 Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 578 (618)
||++|||++|+.||......+... ..+... ... ...+.+++.+||+.||++||++.|
T Consensus 304 Gvil~elltg~~Pf~~~~~~~~~~-----------------~~~~~~---~~~---~~~~~~li~~~l~~dP~~Rpt~~~ 360 (413)
T 3dzo_A 304 GLAIYWIWCADLPNTDDAALGGSE-----------------WIFRSC---KNI---PQPVRALLEGFLRYPKEDRLLPLQ 360 (413)
T ss_dssp HHHHHHHHHSSCCCCTTGGGSCSG-----------------GGGSSC---CCC---CHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred HHHHHHHHHCCCCCCCcchhhhHH-----------------HHHhhc---ccC---CHHHHHHHHHHccCChhhCcCHHH
Confidence 999999999999997643221111 011100 011 245777778999999999999777
Q ss_pred HH
Q 007088 579 VY 580 (618)
Q Consensus 579 vl 580 (618)
++
T Consensus 361 ~l 362 (413)
T 3dzo_A 361 AM 362 (413)
T ss_dssp HT
T ss_pred HH
Confidence 64
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.6e-36 Score=309.35 Aligned_cols=227 Identities=19% Similarity=0.255 Sum_probs=176.7
Q ss_pred hccCCCC-cEEeecCCeeEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHH-hcCCCCCccceeEEEEe----CCeeE
Q 007088 305 TNSFSKN-NIIGTGRTGATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTL-GSVRHRNLVPLLGFCVA----KKERL 377 (618)
Q Consensus 305 ~~~y~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~~ 377 (618)
.++|.+. +.||+|+||.||++.. .+++.||+|+++.. ..+.+|++++ +..+||||+++++++.. ....+
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 3456666 7799999999999995 57899999999653 3567888887 55699999999999987 66789
Q ss_pred EEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCC---CCceEEcccCc
Q 007088 378 LVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDG---DFEPKLSDFGL 454 (618)
Q Consensus 378 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfG~ 454 (618)
+||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 92 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~ 166 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF 166 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEeecCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecccc
Confidence 99999999999999976543 4599999999999999999999999 9999999999999998 78899999999
Q ss_pred ccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCCccccCHHHHHHHHhc
Q 007088 455 ARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTHLTNAPESFKGSLVEWITLLNT 534 (618)
Q Consensus 455 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~~~~~~~~~~~~l~~~~~~~~~ 534 (618)
+.... +..++.++|||||||++|||++|+.||...........
T Consensus 167 a~~~~--------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~----------- 209 (299)
T 3m2w_A 167 AKETT--------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG----------- 209 (299)
T ss_dssp CEECT--------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CC-----------
T ss_pred ccccc--------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHH-----------
Confidence 86432 13457899999999999999999999975432211000
Q ss_pred CCccchhccccccCCCC----HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 007088 535 NSSLETAIDKSLLGNGF----DGELHQFLRVACNCVLPTPKERHTMFEVYQ 581 (618)
Q Consensus 535 ~~~~~~~~d~~l~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 581 (618)
....+... ..... ......+.+++.+||+.||.+|||+.|+++
T Consensus 210 ---~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 210 ---MKTRIRMG-QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp ---SCCSSCTT-CCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---HHHHHhhc-cccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00000000 00001 112346777888999999999999999986
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=6.2e-37 Score=317.83 Aligned_cols=237 Identities=14% Similarity=0.087 Sum_probs=182.2
Q ss_pred hccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCc---------cCHHHHHHHHHHHhcCC---------CCCccce
Q 007088 305 TNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ---------HSEKEFLSEINTLGSVR---------HRNLVPL 366 (618)
Q Consensus 305 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l~---------h~niv~l 366 (618)
.++|++.+.||+|+||.||+|+. +|+.||||+++... ...+.+.+|+.++++++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46788999999999999999998 78999999997532 23477889999988885 7777777
Q ss_pred eEEEE------------------------------eCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHH
Q 007088 367 LGFCV------------------------------AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSAR 416 (618)
Q Consensus 367 ~~~~~------------------------------~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~ 416 (618)
.+++. ..+..++||||+++|++.+.+.. ..+++..++.++.||+.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHHH
Confidence 77643 25788999999999987777743 24899999999999999
Q ss_pred HHHHHH-hCCCCCceecCCCCCCeeeCCCC--------------------ceEEcccCcccccCCCCCcccccccCCCCc
Q 007088 417 GLAWLH-HNCNPRIIHRNISSKCILLDGDF--------------------EPKLSDFGLARLMNPVDTHLSTFVNGEFGD 475 (618)
Q Consensus 417 ~L~~LH-~~~~~~ivH~Dlkp~NIll~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt 475 (618)
||+||| +. +|+||||||+|||++.++ .+||+|||+|+..... ...||
T Consensus 173 aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~---------~~~gt 240 (336)
T 2vuw_A 173 SLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG---------IVVFC 240 (336)
T ss_dssp HHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT---------EEECC
T ss_pred HHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC---------cEEEe
Confidence 999999 88 999999999999999887 8999999999876532 12389
Q ss_pred ccccCCCCCCCCCCCCccchHHHHHH-HHHHHhCCCCCCCCCCCCccccCHHHHHHHH----hcCCccchhccccccCCC
Q 007088 476 LGYVAPEYPRTLVATPKGDVYSFGVV-LLELITGERPTHLTNAPESFKGSLVEWITLL----NTNSSLETAIDKSLLGNG 550 (618)
Q Consensus 476 ~~y~aPE~~~~~~~~~~sDVwS~Gvi-l~elltG~~Pf~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~d~~l~~~~ 550 (618)
+.|+|||++.+.. +.++||||+|++ .+++++|..||.. ..|.... ....... .......
T Consensus 241 ~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~-----------~~~~~~~~~~~~~~~~~~----~~~~~~~ 304 (336)
T 2vuw_A 241 DVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN-----------VLWLHYLTDKMLKQMTFK----TKCNTPA 304 (336)
T ss_dssp CCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH-----------HHHHHHHHHHHHHTCCCS----SCCCSHH
T ss_pred ecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc-----------hhhhhHHHHhhhhhhccC----cccchhh
Confidence 9999999998766 889999998777 7778889988742 1111111 1000000 0000011
Q ss_pred CHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 007088 551 FDGELHQFLRVACNCVLPTPKERHTMFEVY 580 (618)
Q Consensus 551 ~~~~~~~l~~li~~cl~~dP~~RPs~~evl 580 (618)
......++.+++.+||+.| |++|++
T Consensus 305 ~~~~s~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 305 MKQIKRKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred hhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence 2345677888999999976 888887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=8.7e-31 Score=289.17 Aligned_cols=183 Identities=18% Similarity=0.049 Sum_probs=128.7
Q ss_pred EeecCCeeEEEEE-eCCCcEEEEEEeccCc-----------cCHHHHHHHHHHHhcC-CCCCccceeEEEEeCCeeEEEE
Q 007088 314 IGTGRTGATYIAM-LPGGCFIMIKRLEDSQ-----------HSEKEFLSEINTLGSV-RHRNLVPLLGFCVAKKERLLVY 380 (618)
Q Consensus 314 lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-----------~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 380 (618)
.+.|+.|.+..++ .--|+.|++|++.... ...++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4556666666554 3457889999996531 2235699999999999 7999999999999999999999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCC
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNP 460 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 460 (618)
||++|++|.++|.... +++.. +|+.||+.||+|+|++ |||||||||+|||++.++++||+|||+|+....
T Consensus 322 Eyv~G~~L~d~i~~~~----~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE----EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp ECCCSEEHHHHHHTTC----CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred ecCCCCcHHHHHHhCC----CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 9999999999997654 36654 5889999999999999 999999999999999999999999999987655
Q ss_pred CCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCC
Q 007088 461 VDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511 (618)
Q Consensus 461 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~P 511 (618)
....... .+||+.|+|||++.+ .+..++|+||+|++++++.++..+
T Consensus 392 ~~~~~~t----~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 392 DCSWPTN----LVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp --CCSHH----HHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCccccC----ceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 4333222 348999999999876 467789999999998887665444
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=3e-27 Score=259.41 Aligned_cols=187 Identities=17% Similarity=0.163 Sum_probs=145.7
Q ss_pred CCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCc---------cCHHHHHHHHHHHhcCCCCCccceeEEEEeCCeeEEE
Q 007088 309 SKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ---------HSEKEFLSEINTLGSVRHRNLVPLLGFCVAKKERLLV 379 (618)
Q Consensus 309 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 379 (618)
...+.||+|+||.||++.. .+..+++|+..... ...+.+.+|++++++++||||+++..++...++.++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999954 56788888764321 1134589999999999999999777777788888999
Q ss_pred EeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 380 YSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 380 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
|||+++|+|.+++.. +..++.|+++||+|||++ +|+||||||+|||++. ++||+|||+++...
T Consensus 418 mE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 418 MSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp EECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred EECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 999999999999875 457999999999999999 9999999999999999 99999999999876
Q ss_pred CCCCcccc---cccCCCCcccccCCCCCCC--CCCCCccchHHHHHHHHHHHhCCCCCC
Q 007088 460 PVDTHLST---FVNGEFGDLGYVAPEYPRT--LVATPKGDVYSFGVVLLELITGERPTH 513 (618)
Q Consensus 460 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwS~Gvil~elltG~~Pf~ 513 (618)
........ ......||+.|+|||++.. ..|+..+|+|+..+-..+-+.++.+|.
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 53221100 1112348999999999876 567888999999999999988887763
No 253
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.93 E-value=6.6e-26 Score=232.31 Aligned_cols=175 Identities=27% Similarity=0.448 Sum_probs=155.8
Q ss_pred cCCcchHHHHHHHHHhccCCCCccccCccCCCCCCCCCCc--ccceecCCCC-CCcEEEEEecCCccee--eCCcCCCCC
Q 007088 31 LATLNDIECLKSVKNSLEDPFNYLTTSWNFNNNTEGFICQ--FTGVDCWHPD-ENKVLNIRLSDMGLKG--QFPRGIERC 105 (618)
Q Consensus 31 ~~~~~~~~~L~~~k~~~~~~~~~l~~~W~~~~~~~~~~c~--w~gv~c~~~~-~~~v~~l~l~~~~l~g--~~p~~~~~l 105 (618)
.|.+.|++||++||+++.||. .+. +|..+ .+||. |.||.|+... .++|+.|+|++|+++| .+|+.++++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~-~W~~~----~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l 75 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLS-SWLPT----TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANL 75 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGT-TCCTT----SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGC
T ss_pred CCCHHHHHHHHHHHHhcCCcc-ccc-CCCCC----CCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCC
Confidence 488999999999999998886 444 89743 35787 9999996421 2799999999999999 999999999
Q ss_pred CCCCeEEccC-CcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCCcccccccccccc
Q 007088 106 TSLTGLDLSS-NNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTF 184 (618)
Q Consensus 106 ~~L~~L~l~~-n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l 184 (618)
++|++|+|++ |++.|.+|..+.. +++|++|+|++|+++|.+|..++++++|++|+|++|+++|.+|..++.+++|++|
T Consensus 76 ~~L~~L~L~~~n~l~~~~p~~l~~-l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 154 (313)
T 1ogq_A 76 PYLNFLYIGGINNLVGPIPPAIAK-LTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGI 154 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGG-CTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEE
T ss_pred CCCCeeeCCCCCcccccCChhHhc-CCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeE
Confidence 9999999995 9999999999876 9999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCc-c--ccccccccCCC
Q 007088 185 SVASNLLTGPVPSFAN-V--NFTAEDFANNS 212 (618)
Q Consensus 185 ~l~~N~l~g~ip~~~~-~--~~~~~~~~~n~ 212 (618)
++++|+++|.+|.... . .+..+++++|.
T Consensus 155 ~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~ 185 (313)
T 1ogq_A 155 TFDGNRISGAIPDSYGSFSKLFTSMTISRNR 185 (313)
T ss_dssp ECCSSCCEEECCGGGGCCCTTCCEEECCSSE
T ss_pred ECcCCcccCcCCHHHhhhhhcCcEEECcCCe
Confidence 9999999999996432 2 45677888874
No 254
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.90 E-value=5e-24 Score=214.60 Aligned_cols=142 Identities=13% Similarity=0.138 Sum_probs=116.8
Q ss_pred CHHHHHHhhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCcc-------------------CHHHHHHHHHHHhc
Q 007088 297 RLSDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQH-------------------SEKEFLSEINTLGS 357 (618)
Q Consensus 297 ~~~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------------------~~~~~~~E~~~l~~ 357 (618)
.+..+......|...+.||+|+||.||+|...+|+.||+|.++.... ....+.+|+.++++
T Consensus 81 ~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~ 160 (282)
T 1zar_A 81 SLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK 160 (282)
T ss_dssp HHHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh
Confidence 34555566667778899999999999999997899999999964321 24568899999999
Q ss_pred CCCCCccceeEEEEeCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCC
Q 007088 358 VRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSK 437 (618)
Q Consensus 358 l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~ 437 (618)
++ | +++.+++.. +..++||||+++|+|.+ +... ....++.|++.||.|||+. +|+||||||+
T Consensus 161 l~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~~----------~~~~i~~qi~~~l~~lH~~---giiHrDlkp~ 222 (282)
T 1zar_A 161 LQ--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRVE----------NPDEVLDMILEEVAKFYHR---GIVHGDLSQY 222 (282)
T ss_dssp TT--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCCS----------CHHHHHHHHHHHHHHHHHT---TEECSCCSTT
T ss_pred cc--C-CCcCeEEec-cceEEEEEecCCCcHHH-cchh----------hHHHHHHHHHHHHHHHHHC---CCEeCCCCHH
Confidence 99 5 666665543 56799999999999998 4321 2346999999999999999 9999999999
Q ss_pred CeeeCCCCceEEcccCcccc
Q 007088 438 CILLDGDFEPKLSDFGLARL 457 (618)
Q Consensus 438 NIll~~~~~~kl~DfG~a~~ 457 (618)
|||++ ++.+||+|||+++.
T Consensus 223 NILl~-~~~vkl~DFG~a~~ 241 (282)
T 1zar_A 223 NVLVS-EEGIWIIDFPQSVE 241 (282)
T ss_dssp SEEEE-TTEEEECCCTTCEE
T ss_pred HEEEE-CCcEEEEECCCCeE
Confidence 99999 99999999999973
No 255
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.89 E-value=4e-24 Score=245.31 Aligned_cols=174 Identities=19% Similarity=0.271 Sum_probs=150.2
Q ss_pred CCcchHHHHHHHHHhccCCCCccccCccCCC---CCCCCCCcc------------cceecCCCCCCcEEEEEecCCccee
Q 007088 32 ATLNDIECLKSVKNSLEDPFNYLTTSWNFNN---NTEGFICQF------------TGVDCWHPDENKVLNIRLSDMGLKG 96 (618)
Q Consensus 32 ~~~~~~~~L~~~k~~~~~~~~~l~~~W~~~~---~~~~~~c~w------------~gv~c~~~~~~~v~~l~l~~~~l~g 96 (618)
+...|+.||++||+++.+| +|+.++ ..++++|.| .||.|+. .++|+.|+|++++|+|
T Consensus 266 ~~~~d~~ALl~~k~~l~~~------~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~--~~~V~~L~Ls~~~L~G 337 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDGK------NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN--NGRVTGLSLAGFGAKG 337 (876)
T ss_dssp HHHHHHHHHHHHHHHTTGG------GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT--TSCEEEEECTTTCCEE
T ss_pred cchHHHHHHHHHHHHcCCC------CCCcCCCcccccCCccccccccccccccCcCceEecC--CCCEEEEECccCCCCC
Confidence 4457999999999999877 787654 122334999 9999975 5899999999999999
Q ss_pred eCCcCCCCCCCCCeEEc-cCCcCccc------------------------------------------------------
Q 007088 97 QFPRGIERCTSLTGLDL-SSNNLSGS------------------------------------------------------ 121 (618)
Q Consensus 97 ~~p~~~~~l~~L~~L~l-~~n~l~g~------------------------------------------------------ 121 (618)
.+|++|++|++|++|+| ++|.++|.
T Consensus 338 ~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i 417 (876)
T 4ecn_A 338 RVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPI 417 (876)
T ss_dssp EECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCC
T ss_pred cCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccc
Confidence 99999999999999999 88877666
Q ss_pred ----------------------cCchhhhcCCCCCEEEeeCCCCcc-----------------cCCCCCc--CCCCCcEE
Q 007088 122 ----------------------IPSDISSRLQYVTSLDLSSNSLSG-----------------EIPSGLA--NCTFLNVL 160 (618)
Q Consensus 122 ----------------------ip~~~~~~l~~L~~L~l~~N~l~g-----------------~ip~~~~--~l~~L~~l 160 (618)
||.++++ |++|+.|+|++|+|+| .||.+++ +|++|+.|
T Consensus 418 ~~~~~l~l~~l~l~~~~N~L~~IP~~l~~-L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L 496 (876)
T 4ecn_A 418 KKDSRISLKDTQIGNLTNRITFISKAIQR-LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDV 496 (876)
T ss_dssp CCCCCCCCCTTTTTCCSCEEEEECGGGGG-CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEE
T ss_pred ccccccchhhceeccccCcccchhHHHhc-CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEE
Confidence 8888876 9999999999999999 4999998 99999999
Q ss_pred EccCcccCCCCCcccccccccccccccccc-ccC-CCCCCCc-c--------ccccccccCCCCC
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFSVASNL-LTG-PVPSFAN-V--------NFTAEDFANNSGL 214 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~-l~g-~ip~~~~-~--------~~~~~~~~~n~~~ 214 (618)
+|++|++.|.+|..++++++|+.|+|++|+ |+| .+|.... + ++..+++++|...
T Consensus 497 ~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 497 ELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp EEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 999999999999999999999999999998 999 8885321 1 4667778887644
No 256
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.89 E-value=1.5e-23 Score=235.56 Aligned_cols=174 Identities=21% Similarity=0.269 Sum_probs=151.6
Q ss_pred CcchHHHHHHHHHhccCCCCcccc-------CccCCCCCCCCCCcc---cceecCCCCCCcEEEEEecCCcceeeCCcCC
Q 007088 33 TLNDIECLKSVKNSLEDPFNYLTT-------SWNFNNNTEGFICQF---TGVDCWHPDENKVLNIRLSDMGLKGQFPRGI 102 (618)
Q Consensus 33 ~~~~~~~L~~~k~~~~~~~~~l~~-------~W~~~~~~~~~~c~w---~gv~c~~~~~~~v~~l~l~~~~l~g~~p~~~ 102 (618)
...|+.||.++++++.++.+.... +|+.+ .+||.| .||+|+. .++|+.|+|++++++|.+|++|
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~----~~~c~w~~~~GV~C~~--~~~V~~L~L~~~~l~g~lp~~l 101 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN----KELDMWGAQPGVSLNS--NGRVTGLSLEGFGASGRVPDAI 101 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCS----SCGGGTTCCTTEEECT--TCCEEEEECTTSCCEEEECGGG
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC----CCcccccCCCCeEEcC--CCCEEEEEecCcccCCcCChHH
Confidence 346999999999999877544332 68743 568999 9999975 3899999999999999999999
Q ss_pred CCCCCCCeEEccCC------------------------------------------------------------------
Q 007088 103 ERCTSLTGLDLSSN------------------------------------------------------------------ 116 (618)
Q Consensus 103 ~~l~~L~~L~l~~n------------------------------------------------------------------ 116 (618)
++|++|++|+|++|
T Consensus 102 ~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 181 (636)
T 4eco_A 102 GQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRI 181 (636)
T ss_dssp GGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCC
T ss_pred hcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCcccccccccccc
Confidence 99999999999988
Q ss_pred ------------cCccccCchhhhcCCCCCEEEeeCCCCccc-----------------CCCCCc--CCCCCcEEEccCc
Q 007088 117 ------------NLSGSIPSDISSRLQYVTSLDLSSNSLSGE-----------------IPSGLA--NCTFLNVLKLNNN 165 (618)
Q Consensus 117 ------------~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~-----------------ip~~~~--~l~~L~~l~l~~N 165 (618)
+|+| ||.+++. +++|++|+|++|+|+|. +|.+++ ++++|++|+|++|
T Consensus 182 ~l~~l~l~~~~n~l~~-ip~~l~~-l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n 259 (636)
T 4eco_A 182 TLKDTQIGQLSNNITF-VSKAVMR-LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNC 259 (636)
T ss_dssp CCCTTTTTCCSCEEEE-ECGGGGG-CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECC
T ss_pred chhhhhhccccCCCcc-CCHHHhc-ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCC
Confidence 4556 9998876 99999999999999996 999999 9999999999999
Q ss_pred ccCCCCCcccccccccccccccccc-ccC-CCCCCC-c-------cccccccccCCCCC
Q 007088 166 RFTGKIPPQLGLLNRIKTFSVASNL-LTG-PVPSFA-N-------VNFTAEDFANNSGL 214 (618)
Q Consensus 166 ~l~g~~p~~l~~~~~L~~l~l~~N~-l~g-~ip~~~-~-------~~~~~~~~~~n~~~ 214 (618)
++.|.+|..++++++|+.|++++|+ ++| .+|... . .++..+++++|...
T Consensus 260 ~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 260 PNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp TTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred cCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 9999999999999999999999998 999 888532 1 26777888888644
No 257
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.88 E-value=4.1e-23 Score=237.22 Aligned_cols=174 Identities=30% Similarity=0.365 Sum_probs=144.6
Q ss_pred ccCCcchHHHHHHHHHhccCCCCccccCccCCCCCCCCCCcccceecCCCCCCcEEEEEecCCcceee---CC-------
Q 007088 30 SLATLNDIECLKSVKNSLEDPFNYLTTSWNFNNNTEGFICQFTGVDCWHPDENKVLNIRLSDMGLKGQ---FP------- 99 (618)
Q Consensus 30 ~~~~~~~~~~L~~~k~~~~~~~~~l~~~W~~~~~~~~~~c~w~gv~c~~~~~~~v~~l~l~~~~l~g~---~p------- 99 (618)
+.+...|++||++||+++.||. .+. +|+. +.+||.|.||+|+ .++|+.|+|+++++.|. +|
T Consensus 7 ~~~~~~~~~all~~k~~~~~~~-~l~-~W~~----~~~~C~w~gv~C~---~~~v~~L~L~~~~l~g~~~~l~~~l~~L~ 77 (768)
T 3rgz_A 7 SQSLYREIHQLISFKDVLPDKN-LLP-DWSS----NKNPCTFDGVTCR---DDKVTSIDLSSKPLNVGFSAVSSSLLSLT 77 (768)
T ss_dssp -CCHHHHHHHHHHHHTTCSCTT-SST-TCCT----TSCGGGSTTEEEE---TTEEEEEECTTSCCCEEHHHHHHHTTTCT
T ss_pred ccCCHHHHHHHHHHHhhCCCcc-ccc-CCCC----CCCCcCCcceEEC---CCcEEEEECCCCCcCCccCccChhHhccC
Confidence 3456789999999999999987 554 9973 3469999999996 58999999999999997 44
Q ss_pred ----------------cCCCCCCCCCeEEccCCcCccccCc--hhhhcCCCCCEEEeeCCCCcccCCCCC-cCCCCCcEE
Q 007088 100 ----------------RGIERCTSLTGLDLSSNNLSGSIPS--DISSRLQYVTSLDLSSNSLSGEIPSGL-ANCTFLNVL 160 (618)
Q Consensus 100 ----------------~~~~~l~~L~~L~l~~n~l~g~ip~--~~~~~l~~L~~L~l~~N~l~g~ip~~~-~~l~~L~~l 160 (618)
+.++++++|++|||++|.++|.+|. .++. +++|++|+|++|.++|.+|..+ +++++|++|
T Consensus 78 ~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~-l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 156 (768)
T 3rgz_A 78 GLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGS-CSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVL 156 (768)
T ss_dssp TCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGG-CTTCCEEECCSSEEECCSSCCSCCCCTTCSEE
T ss_pred cccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhC-CCCCCEEECcCCccCCcCCHHHhccCCCCCEE
Confidence 5788889999999999999999998 8875 9999999999999999999876 889999999
Q ss_pred EccCcccCCCCCcc---ccccccccccccccccccCCCCCCCccccccccccCCCC
Q 007088 161 KLNNNRFTGKIPPQ---LGLLNRIKTFSVASNLLTGPVPSFANVNFTAEDFANNSG 213 (618)
Q Consensus 161 ~l~~N~l~g~~p~~---l~~~~~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n~~ 213 (618)
+|++|+++|.+|.. ++++++|+.|++++|.++|.+|...-.++..+++++|..
T Consensus 157 ~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l 212 (768)
T 3rgz_A 157 DLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNF 212 (768)
T ss_dssp ECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCC
T ss_pred ECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcC
Confidence 99999999888877 777888888888888888877753223566667777754
No 258
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.84 E-value=6.4e-22 Score=203.96 Aligned_cols=178 Identities=18% Similarity=0.259 Sum_probs=146.2
Q ss_pred ccCCcchHHHHHHHHHhc-cCCCCccccCccCCCCCCCCCCcccceecCC-------CCCCcEEEEEecCCcceeeCCcC
Q 007088 30 SLATLNDIECLKSVKNSL-EDPFNYLTTSWNFNNNTEGFICQFTGVDCWH-------PDENKVLNIRLSDMGLKGQFPRG 101 (618)
Q Consensus 30 ~~~~~~~~~~L~~~k~~~-~~~~~~l~~~W~~~~~~~~~~c~w~gv~c~~-------~~~~~v~~l~l~~~~l~g~~p~~ 101 (618)
+.+..+++.||++||.++ .++.+.+ .+|...+.....+|.|.|+.|.. ....+|+.|+|++|+++ .+|+.
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~-~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~ 99 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWH-SAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQ 99 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHH-HHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSC
T ss_pred cccCchHHHHHHHHHHhccCCchhhh-hhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChh
Confidence 446678999999999998 4665554 48964444567799999999952 12468999999999998 89999
Q ss_pred CCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCCccccc----
Q 007088 102 IERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGL---- 177 (618)
Q Consensus 102 ~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~---- 177 (618)
++++++|++|+|++|+++ .+|..++. +++|++|+|++|+++ .+|..++++++|+.|+|++|++.|.+|..++.
T Consensus 100 l~~l~~L~~L~L~~n~l~-~lp~~~~~-l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~ 176 (328)
T 4fcg_A 100 AFRLSHLQHMTIDAAGLM-ELPDTMQQ-FAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDAS 176 (328)
T ss_dssp GGGGTTCSEEEEESSCCC-CCCSCGGG-GTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-C
T ss_pred hhhCCCCCEEECCCCCcc-chhHHHhc-cCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccch
Confidence 999999999999999999 89988875 999999999999999 89999999999999999999999999988765
Q ss_pred -----cccccccccccccccCCCCCCCc-c-ccccccccCCCC
Q 007088 178 -----LNRIKTFSVASNLLTGPVPSFAN-V-NFTAEDFANNSG 213 (618)
Q Consensus 178 -----~~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n~~ 213 (618)
+++|+.|+|++|+++ .+|.... + ++..+++++|..
T Consensus 177 ~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l 218 (328)
T 4fcg_A 177 GEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPL 218 (328)
T ss_dssp CCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCC
T ss_pred hhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCC
Confidence 889999999999998 6775322 1 566677777753
No 259
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.84 E-value=2.7e-21 Score=222.10 Aligned_cols=138 Identities=33% Similarity=0.617 Sum_probs=129.3
Q ss_pred EEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEccCcc
Q 007088 87 IRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNR 166 (618)
Q Consensus 87 l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~ 166 (618)
++++.|.++|.+|..++++++|+.|||++|+|+|.||.+++. +++|+.|+|++|+|+|.||.++++|++|+.|||++|+
T Consensus 613 ~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~-l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~ 691 (768)
T 3rgz_A 613 CNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS-MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 691 (768)
T ss_dssp SCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGG-CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred cccccceecccCchhhhccccccEEECcCCcccccCCHHHhc-cccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCc
Confidence 456678999999999999999999999999999999999986 9999999999999999999999999999999999999
Q ss_pred cCCCCCccccccccccccccccccccCCCCCCCcc-ccccccccCCCCCCCCCCCCCCCC
Q 007088 167 FTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFANV-NFTAEDFANNSGLCGKPLNPCPGV 225 (618)
Q Consensus 167 l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~~-~~~~~~~~~n~~~c~~~~~~C~~~ 225 (618)
|+|.||..++.+++|+.|+|++|+|+|.||....+ .+...+|.||+++||.|..+|...
T Consensus 692 l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~~ 751 (768)
T 3rgz_A 692 LDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPS 751 (768)
T ss_dssp CEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSCCCCSC
T ss_pred ccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCcCCCCC
Confidence 99999999999999999999999999999976543 677889999999999999899754
No 260
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=8.1e-20 Score=178.12 Aligned_cols=151 Identities=22% Similarity=0.260 Sum_probs=131.6
Q ss_pred CCCCCcccceecCCCC--------CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEE
Q 007088 65 EGFICQFTGVDCWHPD--------ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSL 136 (618)
Q Consensus 65 ~~~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L 136 (618)
..+.|+|++|.|.... ..+++.|+|++|++++..|..+.++++|++|+|++|+|+ .+|...+..+++|++|
T Consensus 15 ~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L 93 (229)
T 3e6j_A 15 SQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQLTVL 93 (229)
T ss_dssp TTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred CCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCC-CcChhhcccCCCcCEE
Confidence 4568999999997532 357899999999999998999999999999999999997 7887766669999999
Q ss_pred EeeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCCccccccccccccccccccccCCCCCCCc--cccccccccCCCCC
Q 007088 137 DLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN--VNFTAEDFANNSGL 214 (618)
Q Consensus 137 ~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~--~~~~~~~~~~n~~~ 214 (618)
+|++|+|++..|..+..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+.... .++..+++.+|++.
T Consensus 94 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 94 DLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred ECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 99999999655566899999999999999999 8999999999999999999999987765332 26778899999998
Q ss_pred CCC
Q 007088 215 CGK 217 (618)
Q Consensus 215 c~~ 217 (618)
|.+
T Consensus 173 c~c 175 (229)
T 3e6j_A 173 CEC 175 (229)
T ss_dssp TTB
T ss_pred CCc
Confidence 853
No 261
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.80 E-value=5.1e-20 Score=182.94 Aligned_cols=145 Identities=14% Similarity=0.101 Sum_probs=109.6
Q ss_pred HHHHHhhccCCCCcEEeecCCeeEEEEEe-CCCcE--EEEEEeccCccC-------------------------HHHHHH
Q 007088 299 SDLMKATNSFSKNNIIGTGRTGATYIAML-PGGCF--IMIKRLEDSQHS-------------------------EKEFLS 350 (618)
Q Consensus 299 ~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~-------------------------~~~~~~ 350 (618)
..+.....-|++.+.||+|+||.||+|.. .+|+. ||||+++..... ...+.+
T Consensus 40 ~~~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (258)
T 1zth_A 40 YKLSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEK 119 (258)
T ss_dssp HHHHHTTSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHH
T ss_pred HHHHhCCCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHH
Confidence 33333333467788999999999999997 78888 999987543111 135789
Q ss_pred HHHHHhcCCCCCc--cceeEEEEeCCeeEEEEeecCC-C----ccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHH-
Q 007088 351 EINTLGSVRHRNL--VPLLGFCVAKKERLLVYSYLEN-G----TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLH- 422 (618)
Q Consensus 351 E~~~l~~l~h~ni--v~l~~~~~~~~~~~lV~e~~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH- 422 (618)
|+.++.+++|+++ +.++++ +..++||||+.+ | +|.+.... .++..+..++.|++.||.|||
T Consensus 120 E~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~ 188 (258)
T 1zth_A 120 EFRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQ 188 (258)
T ss_dssp HHHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHH
Confidence 9999999988864 344432 356899999942 4 44443321 224457789999999999999
Q ss_pred hCCCCCceecCCCCCCeeeCCCCceEEcccCcccccC
Q 007088 423 HNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMN 459 (618)
Q Consensus 423 ~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 459 (618)
+. +|+||||||+|||++. .++|+|||+|....
T Consensus 189 ~~---givHrDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 189 EA---ELVHADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp TS---CEECSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred HC---CEEeCCCCHHHEEEcC--cEEEEECcccccCC
Confidence 88 9999999999999998 99999999997653
No 262
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.78 E-value=9.4e-19 Score=167.82 Aligned_cols=152 Identities=24% Similarity=0.265 Sum_probs=128.3
Q ss_pred CCCCCcccceecCCCC--------CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEE
Q 007088 65 EGFICQFTGVDCWHPD--------ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSL 136 (618)
Q Consensus 65 ~~~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L 136 (618)
..+.|.|.+|.|.... ..+++.|+|++|++++..+..+.++++|++|+|++|+++ .+|...+..+++|++|
T Consensus 3 ~~C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L 81 (208)
T 2o6s_A 3 SRCSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYL 81 (208)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred CCCEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccC-ccChhhcCCCCCcCEE
Confidence 3467899999997532 347899999999999766677899999999999999999 6777665569999999
Q ss_pred EeeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCCccccccccccccccccccccCCCCCCCc--cccccccccCCCCC
Q 007088 137 DLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN--VNFTAEDFANNSGL 214 (618)
Q Consensus 137 ~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~--~~~~~~~~~~n~~~ 214 (618)
+|++|++++..|..++++++|+.|+|++|+|++..|..+..+++|+.|++++|++++..+.... .++..+++++|+..
T Consensus 82 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 161 (208)
T 2o6s_A 82 NLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 161 (208)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred ECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee
Confidence 9999999965555689999999999999999977677789999999999999999987775332 26788899999887
Q ss_pred CCC
Q 007088 215 CGK 217 (618)
Q Consensus 215 c~~ 217 (618)
|..
T Consensus 162 ~~~ 164 (208)
T 2o6s_A 162 CTC 164 (208)
T ss_dssp CCT
T ss_pred cCC
Confidence 754
No 263
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=8.1e-19 Score=169.90 Aligned_cols=151 Identities=23% Similarity=0.310 Sum_probs=130.7
Q ss_pred CCCCCcccceecCCCC--------CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEE
Q 007088 65 EGFICQFTGVDCWHPD--------ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSL 136 (618)
Q Consensus 65 ~~~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L 136 (618)
..+.|.|..|.|.... ...++.|+|++|++++..+..+..+++|+.|+|++|++++..|..+.+ +++|++|
T Consensus 7 ~~C~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~-l~~L~~L 85 (220)
T 2v9t_B 7 AACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQG-LRSLNSL 85 (220)
T ss_dssp TTSEEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTT-CSSCCEE
T ss_pred CCCEECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhC-CcCCCEE
Confidence 4566889999997532 347899999999999888889999999999999999999766777765 9999999
Q ss_pred EeeCCCCcccCCCC-CcCCCCCcEEEccCcccCCCCCccccccccccccccccccccCCCCCCCc-c-ccccccccCCCC
Q 007088 137 DLSSNSLSGEIPSG-LANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN-V-NFTAEDFANNSG 213 (618)
Q Consensus 137 ~l~~N~l~g~ip~~-~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n~~ 213 (618)
+|++|+|+ .+|.. +..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..|.... + ++..+++++|++
T Consensus 86 ~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 164 (220)
T 2v9t_B 86 VLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164 (220)
T ss_dssp ECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCE
T ss_pred ECCCCcCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCc
Confidence 99999999 56654 68999999999999999998899999999999999999999998886432 2 577889999999
Q ss_pred CCCC
Q 007088 214 LCGK 217 (618)
Q Consensus 214 ~c~~ 217 (618)
.|.+
T Consensus 165 ~c~c 168 (220)
T 2v9t_B 165 ICDC 168 (220)
T ss_dssp ECSG
T ss_pred CCCC
Confidence 8853
No 264
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=6.8e-19 Score=170.43 Aligned_cols=152 Identities=19% Similarity=0.204 Sum_probs=129.6
Q ss_pred CCCCCcccceecCCCC--------CCcEEEEEecCCcceeeCCc-CCCCCCCCCeEEccCCcCccccCchhhhcCCCCCE
Q 007088 65 EGFICQFTGVDCWHPD--------ENKVLNIRLSDMGLKGQFPR-GIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTS 135 (618)
Q Consensus 65 ~~~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~-~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~ 135 (618)
..|.|.|..+.|++.. ...++.|+|++|+|++..|. .+.++++|+.|+|++|++++..|..+. ++++|++
T Consensus 7 ~~C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~-~l~~L~~ 85 (220)
T 2v70_A 7 EKCRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFE-GASGVNE 85 (220)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTT-TCTTCCE
T ss_pred CCCEECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhC-CCCCCCE
Confidence 4566889999997532 23578999999999988664 489999999999999999954444554 5999999
Q ss_pred EEeeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCCccccccccccccccccccccCCCCCCCc-c-ccccccccCCCC
Q 007088 136 LDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN-V-NFTAEDFANNSG 213 (618)
Q Consensus 136 L~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n~~ 213 (618)
|+|++|++++..|..++++++|++|+|++|+|++..|..+..+++|+.|+|++|++++.+|.... + ++..+++++|++
T Consensus 86 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 165 (220)
T 2v70_A 86 ILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPF 165 (220)
T ss_dssp EECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCE
T ss_pred EECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCC
Confidence 99999999977777799999999999999999998899999999999999999999999886443 2 577889999999
Q ss_pred CCCC
Q 007088 214 LCGK 217 (618)
Q Consensus 214 ~c~~ 217 (618)
.|.+
T Consensus 166 ~c~c 169 (220)
T 2v70_A 166 NCNC 169 (220)
T ss_dssp ECSG
T ss_pred cCCC
Confidence 8854
No 265
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.76 E-value=4.5e-19 Score=181.40 Aligned_cols=137 Identities=31% Similarity=0.474 Sum_probs=97.7
Q ss_pred EEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEcc
Q 007088 84 VLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLN 163 (618)
Q Consensus 84 v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~ 163 (618)
++.|+|++|+++|.+|..++.++ |+.|+|++|++++.+|..+. .+++|+.|+|++|++++.+|. +..+++|+.|+|+
T Consensus 176 L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls 252 (313)
T 1ogq_A 176 FTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFG-SDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLR 252 (313)
T ss_dssp CCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCC-TTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECC
T ss_pred CcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHh-cCCCCCEEECCCCceeeecCc-ccccCCCCEEECc
Confidence 44444444444444444444443 44444444444444444443 366777777777777765554 6778888999999
Q ss_pred CcccCCCCCccccccccccccccccccccCCCCCCCcc-ccccccccCCCCCCCCCCCCCC
Q 007088 164 NNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFANV-NFTAEDFANNSGLCGKPLNPCP 223 (618)
Q Consensus 164 ~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~~-~~~~~~~~~n~~~c~~~~~~C~ 223 (618)
+|+|+|.+|..+..+++|+.|+|++|+++|.+|....+ ++..+++++|+++||.|..+|.
T Consensus 253 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~~C~ 313 (313)
T 1ogq_A 253 NNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLPACT 313 (313)
T ss_dssp SSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSSCCC
T ss_pred CCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCCCCC
Confidence 99999999999999999999999999999999986433 6788899999999999887773
No 266
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=1.2e-18 Score=164.88 Aligned_cols=152 Identities=21% Similarity=0.259 Sum_probs=113.7
Q ss_pred CCCCcccceecCCCC--------CCcEEEEEecCCcceeeCCc-CCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEE
Q 007088 66 GFICQFTGVDCWHPD--------ENKVLNIRLSDMGLKGQFPR-GIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSL 136 (618)
Q Consensus 66 ~~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~-~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L 136 (618)
.+.|.|..+.|+... ...++.|+|++|++++..+. .++++++|++|+|++|+|++..|..+.. +++|++|
T Consensus 5 ~C~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L 83 (192)
T 1w8a_A 5 MCHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEG-ASHIQEL 83 (192)
T ss_dssp TSEEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTT-CTTCCEE
T ss_pred CCEECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCC-cccCCEE
Confidence 456889988886532 23778888888888866654 3788888888888888888766776654 8888888
Q ss_pred EeeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCCccccccccccccccccccccCCCCCCCc-cccccccccCCCCCC
Q 007088 137 DLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN-VNFTAEDFANNSGLC 215 (618)
Q Consensus 137 ~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~-~~~~~~~~~~n~~~c 215 (618)
+|++|++++..|..++++++|+.|+|++|+|++.+|..+..+++|+.|+|++|.+++..|-..- ..+....+.++...|
T Consensus 84 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C 163 (192)
T 1w8a_A 84 QLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARC 163 (192)
T ss_dssp ECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBB
T ss_pred ECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCC
Confidence 8888888877777788888888888988888888888888888888888888888887763111 012222444555556
Q ss_pred CCC
Q 007088 216 GKP 218 (618)
Q Consensus 216 ~~~ 218 (618)
+.|
T Consensus 164 ~~P 166 (192)
T 1w8a_A 164 GAP 166 (192)
T ss_dssp CSS
T ss_pred CCC
Confidence 544
No 267
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.71 E-value=1.7e-17 Score=154.76 Aligned_cols=131 Identities=21% Similarity=0.255 Sum_probs=99.9
Q ss_pred CCCCcccceecCCCC--------CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEE
Q 007088 66 GFICQFTGVDCWHPD--------ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLD 137 (618)
Q Consensus 66 ~~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~ 137 (618)
.+.|+|.++.|.... ...++.|+|++|++++..+..+.++++|++|+|++|+++ .+|...+..+++|+.|+
T Consensus 4 ~C~C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~ 82 (177)
T 2o6r_A 4 RCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTILY 82 (177)
T ss_dssp TCEEETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred CCEeCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcce-EeChhHccCCCccCEEE
Confidence 466899999996532 246788888888888666666788888888888888888 56655444588888888
Q ss_pred eeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCCccccccccccccccccccccCCCCC
Q 007088 138 LSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPS 197 (618)
Q Consensus 138 l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~ 197 (618)
|++|++++..|..++++++|+.|+|++|+|++..+..+..+++|+.|++++|.+++..|.
T Consensus 83 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 83 LHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 888888865555678888888888888888854444567788888888888888887763
No 268
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.71 E-value=4e-17 Score=161.33 Aligned_cols=130 Identities=20% Similarity=0.198 Sum_probs=83.1
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
..++.|+|++|++++..|..+.++++|++|+|++|++++..|..+. ++++|++|+|++|++++..|..++.+++|+.|+
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 113 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFD-DLTELGTLGLANNQLASLPLGVFDHLTQLDKLY 113 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTT-TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhc-cCCcCCEEECCCCcccccChhHhcccCCCCEEE
Confidence 3567777777777776666777777777777777777754443343 377777777777777754445566677777777
Q ss_pred ccCcccCCCCCccccccccccccccccccccCCCCCCC-c-cccccccccCCC
Q 007088 162 LNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFA-N-VNFTAEDFANNS 212 (618)
Q Consensus 162 l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~-~-~~~~~~~~~~n~ 212 (618)
|++|+|++..|..+..+++|+.|+|++|++++..|... . .++..+++++|.
T Consensus 114 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 166 (251)
T 3m19_A 114 LGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQ 166 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred cCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCc
Confidence 77777765444455666666777777666666555322 1 144555555554
No 269
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.69 E-value=1.2e-16 Score=165.16 Aligned_cols=146 Identities=13% Similarity=0.101 Sum_probs=106.2
Q ss_pred HHHHHhhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCcc---------------CHH--------HHHHHHHHH
Q 007088 299 SDLMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQH---------------SEK--------EFLSEINTL 355 (618)
Q Consensus 299 ~~l~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~---------------~~~--------~~~~E~~~l 355 (618)
..+.+.-.-|++.+.||+|++|.||+|...+|+.||||+++.... ... ...+|...|
T Consensus 88 ~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL 167 (397)
T 4gyi_A 88 HTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFM 167 (397)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHH
Confidence 334443344899999999999999999998999999998753210 011 123567777
Q ss_pred hcCCCCCccceeEEEEeCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCC
Q 007088 356 GSVRHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNIS 435 (618)
Q Consensus 356 ~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 435 (618)
.++.+.++.-..-+.. ...++||||++|++|.++.... ....++.|++.+|.|||+. ||||||||
T Consensus 168 ~rL~~~gv~vp~p~~~--~~~~LVME~i~G~~L~~l~~~~----------~~~~l~~qll~~l~~lH~~---gIVHrDLK 232 (397)
T 4gyi_A 168 KALYEEGFPVPEPIAQ--SRHTIVMSLVDALPMRQVSSVP----------DPASLYADLIALILRLAKH---GLIHGDFN 232 (397)
T ss_dssp HHHHHTTCSCCCEEEE--ETTEEEEECCSCEEGGGCCCCS----------CHHHHHHHHHHHHHHHHHT---TEECSCCS
T ss_pred HHHHhcCCCCCeeeec--cCceEEEEecCCccHhhhcccH----------HHHHHHHHHHHHHHHHHHC---CCcCCCCC
Confidence 7775554432222211 2347999999998887765321 2356889999999999999 99999999
Q ss_pred CCCeeeCCCC----------ceEEcccCcccccC
Q 007088 436 SKCILLDGDF----------EPKLSDFGLARLMN 459 (618)
Q Consensus 436 p~NIll~~~~----------~~kl~DfG~a~~~~ 459 (618)
|.|||+++++ .+.|+||+-+....
T Consensus 233 p~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 233 EFNILIREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp TTSEEEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred HHHEEEeCCCCcccccccccceEEEEeCCcccCC
Confidence 9999998776 38999999876544
No 270
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.68 E-value=1.1e-16 Score=151.46 Aligned_cols=130 Identities=24% Similarity=0.348 Sum_probs=113.7
Q ss_pred EEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEccC
Q 007088 85 LNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNN 164 (618)
Q Consensus 85 ~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~~ 164 (618)
+.|++++|+|+ .+|..+.. +|++|+|++|++++..|..++..+++|++|+|++|++++.+|..++++++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 47999999995 89987765 9999999999999544444445599999999999999998899999999999999999
Q ss_pred cccCCCCCccccccccccccccccccccCCCCCCCc-c-ccccccccCCCCCCCC
Q 007088 165 NRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN-V-NFTAEDFANNSGLCGK 217 (618)
Q Consensus 165 N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~-~-~~~~~~~~~n~~~c~~ 217 (618)
|+|++..|..+..+++|+.|+|++|++++.+|.... + ++..+++++|++.|.+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 999998888899999999999999999999986543 2 6778899999988753
No 271
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.66 E-value=4.5e-16 Score=155.50 Aligned_cols=130 Identities=20% Similarity=0.235 Sum_probs=102.3
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
..++.|+|++|++++..+..+.++++|++|+|++|+++ .+|..++.++++|++|+|++|++++..|..+.++++|+.|+
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 115 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELR 115 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS-CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEE
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC-eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEE
Confidence 35778888888888766668888999999999999888 67777666688899999999998865455678888899999
Q ss_pred ccCcccCCCCCccccccccccccccccccccCCCCCCC-c-cccccccccCCC
Q 007088 162 LNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFA-N-VNFTAEDFANNS 212 (618)
Q Consensus 162 l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~-~-~~~~~~~~~~n~ 212 (618)
|++|++++..|..++.+++|+.|+|++|++++..+... . .++..+++++|.
T Consensus 116 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 168 (270)
T 2o6q_A 116 LDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQ 168 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCc
Confidence 99998887777778888888888888888887666432 2 256667777774
No 272
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=4.5e-16 Score=147.28 Aligned_cols=126 Identities=26% Similarity=0.367 Sum_probs=105.9
Q ss_pred EEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEccCcc
Q 007088 87 IRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNR 166 (618)
Q Consensus 87 l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~ 166 (618)
+++++|+++ .+|..+. ++|++|+|++|+|+ .+|..+.. +++|+.|+|++|++++..|..|.++++|+.|+|++|+
T Consensus 15 l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~-l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSN-YKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGG-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhc-ccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 455667777 6787664 68999999999999 89977765 9999999999999997767789999999999999999
Q ss_pred cCCCCCccccccccccccccccccccCCCCCCC-cc-ccccccccCCCCCCCC
Q 007088 167 FTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFA-NV-NFTAEDFANNSGLCGK 217 (618)
Q Consensus 167 l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~-~~-~~~~~~~~~n~~~c~~ 217 (618)
|++..|..|..+++|+.|+|++|++++..+... .+ ++..+++++|++.|.+
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 998878889999999999999999997776533 22 6778899999998854
No 273
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=4.4e-16 Score=147.32 Aligned_cols=129 Identities=22% Similarity=0.255 Sum_probs=110.9
Q ss_pred CCCCCcccceecCCCC--------CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEE
Q 007088 65 EGFICQFTGVDCWHPD--------ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSL 136 (618)
Q Consensus 65 ~~~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L 136 (618)
..+.|.|..|.|.+.. ...++.|+|++|+++ .+|..+.++++|+.|+|++|++++ +|...+.++++|++|
T Consensus 6 ~~C~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~-i~~~~f~~l~~L~~L 83 (193)
T 2wfh_A 6 TECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRIST-LSNQSFSNMTQLLTL 83 (193)
T ss_dssp TTCEEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEE
T ss_pred CCCEeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCE-eCHhHccCCCCCCEE
Confidence 3456788889996532 357899999999998 899999999999999999999995 554444459999999
Q ss_pred EeeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCCccccccccccccccccccccCCC
Q 007088 137 DLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPV 195 (618)
Q Consensus 137 ~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~i 195 (618)
+|++|++++..|..+..+++|+.|+|++|+|++..+..+..+++|+.|+|++|.++..-
T Consensus 84 ~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 84 ILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp ECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred ECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 99999999877778999999999999999999655567899999999999999998643
No 274
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.64 E-value=7.7e-16 Score=153.99 Aligned_cols=137 Identities=20% Similarity=0.210 Sum_probs=110.7
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
..+++.|+|++|++++..+..++++++|++|+|++|++++ +|+..+.++++|++|+|++|++++..|..++++++|+.|
T Consensus 84 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 162 (272)
T 3rfs_A 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQS-LPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTEL 162 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCc-cCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEE
Confidence 3578889999999987777778899999999999999985 554443458999999999999996666667889999999
Q ss_pred EccCcccCCCCCccccccccccccccccccccCCCCCCCc--cccccccccCCCCCCCCC
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN--VNFTAEDFANNSGLCGKP 218 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~--~~~~~~~~~~n~~~c~~~ 218 (618)
+|++|++++..|..++.+++|+.|++++|++++.+|.... .++..+++++|+..|.+|
T Consensus 163 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 163 DLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 9999999977777788899999999999999988775432 267778899998877543
No 275
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.63 E-value=6.2e-16 Score=173.23 Aligned_cols=140 Identities=20% Similarity=0.230 Sum_probs=116.3
Q ss_pred ceecCCCC--------CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCc
Q 007088 73 GVDCWHPD--------ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLS 144 (618)
Q Consensus 73 gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~ 144 (618)
.|.|.... +..++.|+|++|+|++..|.+|.+|++|++|||++|+|+ .||+..+.+|++|++|+|++|+|+
T Consensus 35 ~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~-~i~~~~f~~L~~L~~L~Ls~N~l~ 113 (635)
T 4g8a_A 35 TYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQ 113 (635)
T ss_dssp EEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCC
T ss_pred EEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCC-CcChhHhcCCCCCCEEEccCCcCC
Confidence 46786432 357899999999999877889999999999999999999 577665556999999999999999
Q ss_pred ccCCCCCcCCCCCcEEEccCcccCCCCCccccccccccccccccccccC-CCCCCCc--cccccccccCCCC
Q 007088 145 GEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTG-PVPSFAN--VNFTAEDFANNSG 213 (618)
Q Consensus 145 g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g-~ip~~~~--~~~~~~~~~~n~~ 213 (618)
+..|..|++|++|++|+|++|+|++..|..|+++++|+.|+|++|++++ .+|.+.. .++..+++++|..
T Consensus 114 ~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l 185 (635)
T 4g8a_A 114 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 185 (635)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCC
T ss_pred CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccc
Confidence 6444568999999999999999998767789999999999999999986 4665433 2566777777753
No 276
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.62 E-value=6.5e-16 Score=166.23 Aligned_cols=147 Identities=18% Similarity=0.175 Sum_probs=126.0
Q ss_pred CCCcccc--eecCCCC-------CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEE
Q 007088 67 FICQFTG--VDCWHPD-------ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLD 137 (618)
Q Consensus 67 ~~c~w~g--v~c~~~~-------~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~ 137 (618)
..|.|.+ |.|.+.. +.+++.|+|++|++++..|..++++++|++|+|++|.+.+.+|+..+.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 3466555 8886532 357899999999999999999999999999999999999899776556699999999
Q ss_pred eeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCCcc--ccccccccccccccccccCCCCCC--Cc-cccccccccCCC
Q 007088 138 LSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQ--LGLLNRIKTFSVASNLLTGPVPSF--AN-VNFTAEDFANNS 212 (618)
Q Consensus 138 l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~--l~~~~~L~~l~l~~N~l~g~ip~~--~~-~~~~~~~~~~n~ 212 (618)
|++|++++..|..++++++|++|+|++|++++.+|.. ++.+++|+.|+|++|++++..|.. .. .++..+++++|.
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999888999999999999999999999877766 899999999999999999998863 22 257778888885
Q ss_pred C
Q 007088 213 G 213 (618)
Q Consensus 213 ~ 213 (618)
.
T Consensus 166 l 166 (455)
T 3v47_A 166 V 166 (455)
T ss_dssp B
T ss_pred c
Confidence 4
No 277
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.61 E-value=1.7e-15 Score=157.95 Aligned_cols=148 Identities=21% Similarity=0.172 Sum_probs=116.7
Q ss_pred CCCCCCcccceecCCCC--------CCcEEEEEecCCcceeeCCcCCC-CCCCCCeEEccCCcCccccCchhhhcCCCCC
Q 007088 64 TEGFICQFTGVDCWHPD--------ENKVLNIRLSDMGLKGQFPRGIE-RCTSLTGLDLSSNNLSGSIPSDISSRLQYVT 134 (618)
Q Consensus 64 ~~~~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~~~-~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~ 134 (618)
+..|.|.+..|.|.+.. ...++.|+|++|+|++..+..+. ++++|+.|+|++|+|++ +|+..+.++++|+
T Consensus 13 p~~C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~-i~~~~~~~l~~L~ 91 (361)
T 2xot_A 13 PANCLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNF-ISSEAFVPVPNLR 91 (361)
T ss_dssp CTTCEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCE-ECTTTTTTCTTCC
T ss_pred CCCCEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCc-cChhhccCCCCCC
Confidence 34456788889996532 34578899999999987777787 99999999999999995 5544334599999
Q ss_pred EEEeeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCCccccccccccccccccccccCCCCCCC-----cccccccccc
Q 007088 135 SLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFA-----NVNFTAEDFA 209 (618)
Q Consensus 135 ~L~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~-----~~~~~~~~~~ 209 (618)
+|+|++|+|++..|..+.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+... -.++..++++
T Consensus 92 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~ 171 (361)
T 2xot_A 92 YLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLS 171 (361)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECC
T ss_pred EEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECC
Confidence 99999999996656678999999999999999998888889999999999999999987554432 1145556666
Q ss_pred CCC
Q 007088 210 NNS 212 (618)
Q Consensus 210 ~n~ 212 (618)
+|.
T Consensus 172 ~N~ 174 (361)
T 2xot_A 172 SNK 174 (361)
T ss_dssp SSC
T ss_pred CCC
Confidence 664
No 278
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.60 E-value=1.7e-15 Score=146.41 Aligned_cols=115 Identities=17% Similarity=0.224 Sum_probs=105.5
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
..+++.|+|++|+|++..+..|.++++|++|+|++|++++ +|+..+..+++|++|+|++|++++..|..+.++++|+.|
T Consensus 56 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 134 (220)
T 2v70_A 56 LPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN-VQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLL 134 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCC-CCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEE
T ss_pred CCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCc-cCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEE
Confidence 3579999999999998888899999999999999999995 555444459999999999999998889999999999999
Q ss_pred EccCcccCCCCCccccccccccccccccccccCCCC
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVP 196 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip 196 (618)
+|++|+|++..|..+..+++|+.|+|++|.+++..+
T Consensus 135 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 135 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp ECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 999999999889999999999999999999998765
No 279
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.60 E-value=3.1e-15 Score=151.00 Aligned_cols=135 Identities=26% Similarity=0.205 Sum_probs=99.8
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
..+++.|+|++|+++ .+|..+..+++|++|+|++|+|+ .+|+..+..+++|++|+|++|++++..|..+..+++|+.|
T Consensus 76 l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 153 (290)
T 1p9a_G 76 LPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153 (290)
T ss_dssp CTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCC-CCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCc-ccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEE
Confidence 356778888888887 67888888888888888888888 4554434458888888888888885545556788888888
Q ss_pred EccCcccCCCCCccccccccccccccccccccCCCCCCCc-cccccccccCCCCCCCC
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN-VNFTAEDFANNSGLCGK 217 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~-~~~~~~~~~~n~~~c~~ 217 (618)
+|++|+|++..+..+..+++|+.|+|++|+|+...+.... ..+..+++.+|++.|.+
T Consensus 154 ~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 154 SLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp ECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred ECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcC
Confidence 8888888854444567788888888888888843333322 25677788899888853
No 280
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.59 E-value=1.6e-15 Score=155.91 Aligned_cols=131 Identities=18% Similarity=0.257 Sum_probs=114.3
Q ss_pred CcEEEEEecCCcceeeCCcCCCC---------CCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCc
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIER---------CTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLA 152 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~---------l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~ 152 (618)
.+++.|+|++|++.|.+|..++. +++|++|+|++|+++ .+|..+.. +++|++|+|++|++++ +|..++
T Consensus 150 ~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~-l~~L~~L~L~~N~l~~-l~~~l~ 226 (328)
T 4fcg_A 150 NRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIAN-LQNLKSLKIRNSPLSA-LGPAIH 226 (328)
T ss_dssp TTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGG-CTTCCEEEEESSCCCC-CCGGGG
T ss_pred cCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcC-CCCCCEEEccCCCCCc-Cchhhc
Confidence 57899999999999999988875 999999999999999 89988765 9999999999999994 788899
Q ss_pred CCCCCcEEEccCcccCCCCCccccccccccccccccccccCCCCCCCc--cccccccccCCCCCC
Q 007088 153 NCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN--VNFTAEDFANNSGLC 215 (618)
Q Consensus 153 ~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~--~~~~~~~~~~n~~~c 215 (618)
++++|+.|+|++|++.+.+|..++.+++|+.|+|++|++.+.+|.... .++..+++++|...-
T Consensus 227 ~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~ 291 (328)
T 4fcg_A 227 HLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLS 291 (328)
T ss_dssp GCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCC
T ss_pred cCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchh
Confidence 999999999999999999999999999999999999999999996432 156778888886543
No 281
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.59 E-value=4.2e-15 Score=146.73 Aligned_cols=135 Identities=21% Similarity=0.218 Sum_probs=117.0
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
..+++.|+|++|++++..|..+.++++|++|+|++|+++ .+|...+..+++|++|+|++|++++..|..++++++|+.|
T Consensus 58 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 136 (251)
T 3m19_A 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKEL 136 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCccc-ccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEE
Confidence 367999999999999988888999999999999999999 5665555569999999999999996555567999999999
Q ss_pred EccCcccCCCCCccccccccccccccccccccCCCCCCCc--cccccccccCCCCCCC
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN--VNFTAEDFANNSGLCG 216 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~--~~~~~~~~~~n~~~c~ 216 (618)
+|++|+|++..|..++.+++|+.|+|++|++++..|.... .++..+++++|+..|.
T Consensus 137 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 137 RLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred ECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9999999976666899999999999999999988875432 2677889999998874
No 282
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.59 E-value=5.7e-15 Score=147.43 Aligned_cols=135 Identities=20% Similarity=0.216 Sum_probs=78.7
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
.+++.|+|++|++++..+..+.++++|++|+|++|++++ +|+..+..+++|++|+|++|++++..+..++.+++|+.|+
T Consensus 85 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 163 (270)
T 2o6q_A 85 KNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKS-LPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELR 163 (270)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCe-eCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeE
Confidence 345566666666664444445666666666666666663 3333333366666666666666643333356666666666
Q ss_pred ccCcccCCCCCccccccccccccccccccccCCCCCCCc--cccccccccCCCCCCCC
Q 007088 162 LNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN--VNFTAEDFANNSGLCGK 217 (618)
Q Consensus 162 l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~--~~~~~~~~~~n~~~c~~ 217 (618)
|++|++++..|..+..+++|+.|+|++|++++..+.... .++..+++++|++.|.+
T Consensus 164 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 164 LYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSS
T ss_pred ecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCC
Confidence 666666654444566666677777777766655443221 14556677777776643
No 283
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.59 E-value=2.5e-15 Score=161.61 Aligned_cols=136 Identities=20% Similarity=0.161 Sum_probs=122.3
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
..++.|+|++|++++.+|..++++++|++|+|++|++++..|..+.. +++|++|+|++|++++..|..++++++|+.|+
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 353 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWG-LTHLLKLNLSQNFLGSIDSRMFENLDKLEVLD 353 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTT-CTTCCEEECCSSCCCEECGGGGTTCTTCCEEE
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcC-cccCCEEECCCCccCCcChhHhcCcccCCEEE
Confidence 46899999999999999999999999999999999999777777765 99999999999999987788899999999999
Q ss_pred ccCcccCCCCCccccccccccccccccccccCCCCCCCc--cccccccccCCCCCCCCC
Q 007088 162 LNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN--VNFTAEDFANNSGLCGKP 218 (618)
Q Consensus 162 l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~--~~~~~~~~~~n~~~c~~~ 218 (618)
|++|++++..|..+..+++|+.|+|++|++++..+.... .++..+++++|+..|.+|
T Consensus 354 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 354 LSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 999999998899999999999999999999987665432 267888999999988654
No 284
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.58 E-value=4e-15 Score=143.81 Aligned_cols=113 Identities=22% Similarity=0.263 Sum_probs=105.2
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
..+++.|+|++|++++..|..|.++++|++|+|++|+|+ .+|..++..+++|++|+|++|++++..|..+.++++|+.|
T Consensus 55 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 133 (220)
T 2v9t_B 55 YKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLL 133 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEE
Confidence 357999999999999999999999999999999999999 7888876679999999999999998888999999999999
Q ss_pred EccCcccCCCCCccccccccccccccccccccCC
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGP 194 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ 194 (618)
+|++|+|++..|..+..+++|+.|+|++|.++..
T Consensus 134 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 134 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred ECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 9999999987777899999999999999999764
No 285
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.58 E-value=3.6e-15 Score=151.72 Aligned_cols=134 Identities=19% Similarity=0.244 Sum_probs=100.9
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCcc-ccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSG-SIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g-~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
.+++.|+|++|.+.+..|..+.++++|++|+|++|.+++ .+|..+.. +++|++|+|++|++++..|..++++++|+.|
T Consensus 126 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~-l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 204 (306)
T 2z66_A 126 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTE-LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 204 (306)
T ss_dssp TTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTT-CTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhh-CcCCCEEECCCCCcCCcCHHHhcCCCCCCEE
Confidence 467778888888877777778888888888888888876 46665554 7888888888888887667778888888888
Q ss_pred EccCcccCCCCCccccccccccccccccccccCCCCCCCc-c--ccccccccCCCCCCC
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN-V--NFTAEDFANNSGLCG 216 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~-~--~~~~~~~~~n~~~c~ 216 (618)
+|++|++++..+..+..+++|+.|++++|++++.+|.... . ++..+++++|+..|.
T Consensus 205 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 205 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp ECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred ECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 8888888876666777788888888888888887775332 1 466777888877664
No 286
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.58 E-value=2.1e-15 Score=151.79 Aligned_cols=133 Identities=23% Similarity=0.266 Sum_probs=74.0
Q ss_pred cEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEc
Q 007088 83 KVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKL 162 (618)
Q Consensus 83 ~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l 162 (618)
+++.|+|++|++++..|..+.++++|++|+|++|+++ .+|...+..+++|++|+|++|++++..+..+..+++|+.|+|
T Consensus 106 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 184 (285)
T 1ozn_A 106 RLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLL 184 (285)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCccc-ccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEEC
Confidence 4555566666655555555556666666666666665 333332233566666666666666333334556666666666
Q ss_pred cCcccCCCCCccccccccccccccccccccCCCCC-CCc-cccccccccCCCCCCC
Q 007088 163 NNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPS-FAN-VNFTAEDFANNSGLCG 216 (618)
Q Consensus 163 ~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~-~~~-~~~~~~~~~~n~~~c~ 216 (618)
++|++++..|..+..+++|+.|++++|++++..|. +.. .++..+++++|+..|.
T Consensus 185 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 240 (285)
T 1ozn_A 185 HQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD 240 (285)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECS
T ss_pred CCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCC
Confidence 66666655566666666666666666666654432 111 1345566666666553
No 287
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.57 E-value=1.9e-15 Score=164.06 Aligned_cols=143 Identities=17% Similarity=0.157 Sum_probs=120.8
Q ss_pred CcccceecCCCCCCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCC
Q 007088 69 CQFTGVDCWHPDENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIP 148 (618)
Q Consensus 69 c~w~gv~c~~~~~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip 148 (618)
|.+.++.|.. ...++.|+|++|++++..|..++++++|+.|+|++|.++|.+|..++..+++|++|+|++|.|++. |
T Consensus 109 N~l~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~ 185 (487)
T 3oja_A 109 NNISRVSCSR--GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K 185 (487)
T ss_dssp SCCCCEEECC--CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E
T ss_pred CcCCCCCccc--cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c
Confidence 5666777753 467999999999999999999999999999999999999988988875699999999999999965 4
Q ss_pred CCCcCCCCCcEEEccCcccCCCCCccccccccccccccccccccCCCCCCCc-cccccccccCCCCCCC
Q 007088 149 SGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN-VNFTAEDFANNSGLCG 216 (618)
Q Consensus 149 ~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~-~~~~~~~~~~n~~~c~ 216 (618)
. +..+++|+.|+|++|+|++ +|+.++.+++|+.|+|++|.|++..+.+.. .++..+++++|+..|+
T Consensus 186 ~-~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 186 G-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp C-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHH
T ss_pred c-cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCc
Confidence 3 4569999999999999997 556699999999999999999984433332 2677889999998874
No 288
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.57 E-value=6.4e-15 Score=136.28 Aligned_cols=108 Identities=23% Similarity=0.247 Sum_probs=90.8
Q ss_pred EEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEccCc
Q 007088 86 NIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNN 165 (618)
Q Consensus 86 ~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~~N 165 (618)
.|++++|+|+ .+|..+. ++|++|+|++|+|++..|..+.. +++|++|+|++|+|++..|..+.++++|+.|+|++|
T Consensus 13 ~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~-l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 13 TVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDR-LTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTT-CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcC-cccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 3556677887 5887774 89999999999999655666654 999999999999999655555789999999999999
Q ss_pred ccCCCCCccccccccccccccccccccCCCCC
Q 007088 166 RFTGKIPPQLGLLNRIKTFSVASNLLTGPVPS 197 (618)
Q Consensus 166 ~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~ 197 (618)
+|++..|..+..+++|+.|+|++|.+++..+.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 99976666799999999999999999987663
No 289
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.56 E-value=6.7e-16 Score=173.28 Aligned_cols=142 Identities=14% Similarity=0.242 Sum_probs=114.8
Q ss_pred CcccceecCCCCCCcEEEEEecCCcceee-----------------CCcCCC--CCCCCCeEEccCCcCccccCchhhhc
Q 007088 69 CQFTGVDCWHPDENKVLNIRLSDMGLKGQ-----------------FPRGIE--RCTSLTGLDLSSNNLSGSIPSDISSR 129 (618)
Q Consensus 69 c~w~gv~c~~~~~~~v~~l~l~~~~l~g~-----------------~p~~~~--~l~~L~~L~l~~n~l~g~ip~~~~~~ 129 (618)
+...|+.-.-....+++.|+|++|.++|. +|++++ +|++|++|+|++|++.|.+|..++.
T Consensus 193 n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~- 271 (636)
T 4eco_A 193 NNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKA- 271 (636)
T ss_dssp CEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTT-
T ss_pred CCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhc-
Confidence 45555432222346788999999999986 999988 9999999999999999999988875
Q ss_pred CCCCCEEEeeCCC-Ccc-cCCCCCcCC------CCCcEEEccCcccCCCCCc--cccccccccccccccccccCCCCCCC
Q 007088 130 LQYVTSLDLSSNS-LSG-EIPSGLANC------TFLNVLKLNNNRFTGKIPP--QLGLLNRIKTFSVASNLLTGPVPSFA 199 (618)
Q Consensus 130 l~~L~~L~l~~N~-l~g-~ip~~~~~l------~~L~~l~l~~N~l~g~~p~--~l~~~~~L~~l~l~~N~l~g~ip~~~ 199 (618)
+++|++|+|++|+ ++| .+|..++++ ++|+.|+|++|+++ .+|. .++++++|+.|++++|+++|.+|.+.
T Consensus 272 l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~ 350 (636)
T 4eco_A 272 LPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFG 350 (636)
T ss_dssp CSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCE
T ss_pred CCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhC
Confidence 9999999999998 998 889888776 88999999999998 8888 88899999999999999998888433
Q ss_pred cc-ccccccccCCC
Q 007088 200 NV-NFTAEDFANNS 212 (618)
Q Consensus 200 ~~-~~~~~~~~~n~ 212 (618)
.+ ++..+++++|.
T Consensus 351 ~l~~L~~L~L~~N~ 364 (636)
T 4eco_A 351 SEIKLASLNLAYNQ 364 (636)
T ss_dssp EEEEESEEECCSSE
T ss_pred CCCCCCEEECCCCc
Confidence 22 56666777774
No 290
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.56 E-value=1.2e-14 Score=135.24 Aligned_cols=128 Identities=26% Similarity=0.354 Sum_probs=107.4
Q ss_pred EEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEccC
Q 007088 85 LNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNN 164 (618)
Q Consensus 85 ~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~~ 164 (618)
+.+++++++++ .+|..+. ++|+.|+|++|+++ .+|...+.++++|++|+|++|++++..|..++++++|+.|+|++
T Consensus 10 ~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCCc-cCCCCCC--CCCcEEEeCCCccc-EeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 47899999998 5776554 79999999999999 56665545599999999999999965555679999999999999
Q ss_pred cccCCCCCccccccccccccccccccccCCCCCCCc--cccccccccCCCCCCC
Q 007088 165 NRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN--VNFTAEDFANNSGLCG 216 (618)
Q Consensus 165 N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~--~~~~~~~~~~n~~~c~ 216 (618)
|+|++..|..+..+++|+.|++++|++++..+.... .++..+++++|+..|.
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 999987777789999999999999999977665432 2678889999988774
No 291
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.56 E-value=1.5e-14 Score=145.61 Aligned_cols=131 Identities=21% Similarity=0.169 Sum_probs=112.4
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCC-CcccCCCCCcCCCCCcE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNS-LSGEIPSGLANCTFLNV 159 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~-l~g~ip~~~~~l~~L~~ 159 (618)
..+++.|+|++|++++..+..+.++++|++|+|++|.+++..|..+.. +++|++|+|++|+ +++..|..+..+++|+.
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~ 109 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTG-LALLEQLDLSDNAQLRSVDPATFHGLGRLHT 109 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTT-CTTCCEEECCSCTTCCCCCTTTTTTCTTCCE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCC-ccCCCEEeCCCCCCccccCHHHhcCCcCCCE
Confidence 457899999999999888888999999999999999999766777765 9999999999998 77555788999999999
Q ss_pred EEccCcccCCCCCccccccccccccccccccccCCCCCCC-c-cccccccccCCC
Q 007088 160 LKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFA-N-VNFTAEDFANNS 212 (618)
Q Consensus 160 l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~-~-~~~~~~~~~~n~ 212 (618)
|+|++|++++..|..+..+++|+.|++++|++++..+... . .++..+++++|.
T Consensus 110 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 164 (285)
T 1ozn_A 110 LHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNR 164 (285)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCc
Confidence 9999999998888889999999999999999998777533 2 257777888884
No 292
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.56 E-value=1.6e-15 Score=136.96 Aligned_cols=112 Identities=20% Similarity=0.263 Sum_probs=99.7
Q ss_pred CcEEEEEecCCcce-eeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 82 NKVLNIRLSDMGLK-GQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 82 ~~v~~l~l~~~~l~-g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
.+++.|+|++|+++ |.+|..+..+++|+.|+|++|.+++. ..+. ++++|++|+|++|++++.+|..++++++|+.|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~-~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLP-KLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCC-CCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhh-cCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 57889999999999 89999999999999999999999954 4554 49999999999999998888888889999999
Q ss_pred EccCcccCCC-CCccccccccccccccccccccCCCC
Q 007088 161 KLNNNRFTGK-IPPQLGLLNRIKTFSVASNLLTGPVP 196 (618)
Q Consensus 161 ~l~~N~l~g~-~p~~l~~~~~L~~l~l~~N~l~g~ip 196 (618)
+|++|++++. .|..++.+++|+.|++++|.+++..+
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 9999999973 45889999999999999999998766
No 293
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.56 E-value=2.1e-15 Score=139.12 Aligned_cols=130 Identities=19% Similarity=0.195 Sum_probs=102.9
Q ss_pred CCcEEEEEecCCcce-eeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcE
Q 007088 81 ENKVLNIRLSDMGLK-GQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNV 159 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~-g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~ 159 (618)
..+++.|+|++|+++ |.+|..+..+++|+.|+|++|.+++ + ..+. .+++|++|+|++|++++.+|..+.++++|+.
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~-~-~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLIS-V-SNLP-KLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCC-C-SSCC-CCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCC-h-hhhc-cCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 356888999999998 8888888899999999999999885 4 4454 4889999999999999778877778999999
Q ss_pred EEccCcccCCC-CCccccccccccccccccccccCCCC----CCCcc-ccccccccCCCC
Q 007088 160 LKLNNNRFTGK-IPPQLGLLNRIKTFSVASNLLTGPVP----SFANV-NFTAEDFANNSG 213 (618)
Q Consensus 160 l~l~~N~l~g~-~p~~l~~~~~L~~l~l~~N~l~g~ip----~~~~~-~~~~~~~~~n~~ 213 (618)
|+|++|++++. .+..+..+++|+.|++++|.+++..+ .+..+ ++..+++++|..
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 99999999863 22678888999999999999988766 22221 456667777653
No 294
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.55 E-value=2.9e-15 Score=165.12 Aligned_cols=144 Identities=21% Similarity=0.211 Sum_probs=119.4
Q ss_pred CCcccceecCCC----------CCCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEE
Q 007088 68 ICQFTGVDCWHP----------DENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLD 137 (618)
Q Consensus 68 ~c~w~gv~c~~~----------~~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~ 137 (618)
.|.|.|+ |+.. ...+++.|+|++|++++..|..+.++++|++|+|++|++++..|..+.. +++|++|+
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~-l~~L~~L~ 80 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYS-LGSLEHLD 80 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTT-CTTCCEEE
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccc-cccCCEEE
Confidence 4888888 7532 1347999999999999999999999999999999999999766666654 99999999
Q ss_pred eeCCCCcccCCCCCcCCCCCcEEEccCcccCC-CCCccccccccccccccccccccCCCCC--CCcc-ccccccccCCCC
Q 007088 138 LSSNSLSGEIPSGLANCTFLNVLKLNNNRFTG-KIPPQLGLLNRIKTFSVASNLLTGPVPS--FANV-NFTAEDFANNSG 213 (618)
Q Consensus 138 l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g-~~p~~l~~~~~L~~l~l~~N~l~g~ip~--~~~~-~~~~~~~~~n~~ 213 (618)
|++|++++..|..++++++|++|+|++|++++ .+|..++++++|+.|++++|++.+.+|. +..+ ++..+++++|..
T Consensus 81 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 81 LSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp CTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 99999997666669999999999999999997 4678899999999999999997777763 2222 466677777753
No 295
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.55 E-value=5.3e-15 Score=165.17 Aligned_cols=135 Identities=19% Similarity=0.181 Sum_probs=109.1
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccc-cCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGS-IPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~-ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
.+++.|+|++|.+++.+|..++++++|++|+|++|.+++. +|..+.. +++|+.|+|++|++++.+|..++++++|+.|
T Consensus 424 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~-l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 502 (606)
T 3vq2_A 424 EKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFAN-TTNLTFLDLSKCQLEQISWGVFDTLHRLQLL 502 (606)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT-CTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhcc-CCCCCEEECCCCcCCccChhhhcccccCCEE
Confidence 4677888888888888888888888888888888888874 5666654 8888888888888888888888888889999
Q ss_pred EccCcccCCCCCccccccccccccccccccccCCCCC-CCcc--ccccccccCCCCCCCCC
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPS-FANV--NFTAEDFANNSGLCGKP 218 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~-~~~~--~~~~~~~~~n~~~c~~~ 218 (618)
+|++|++++.+|..++.+++|+.|+|++|+++. +|. +... ++..+++++|++.|.++
T Consensus 503 ~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 503 NMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET-SKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp ECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC-EESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred ECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc-cCHhHhhhcccCcEEEccCCCcccCCc
Confidence 999999888888888888889999999998884 543 3332 36778899999888654
No 296
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.55 E-value=4.5e-15 Score=150.95 Aligned_cols=144 Identities=21% Similarity=0.243 Sum_probs=119.5
Q ss_pred CCCCcccceecCCCC--------CCcEEEEEecCCcceeeCCc-CCCCCCCCCeEEccCCcCc--cccCchhhhcCCCCC
Q 007088 66 GFICQFTGVDCWHPD--------ENKVLNIRLSDMGLKGQFPR-GIERCTSLTGLDLSSNNLS--GSIPSDISSRLQYVT 134 (618)
Q Consensus 66 ~~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~-~~~~l~~L~~L~l~~n~l~--g~ip~~~~~~l~~L~ 134 (618)
.+.|.|.+|.|.... ..+++.|+|++|+++ .+|+ .+.++++|++|+|++|+++ |.+|..+.. +++|+
T Consensus 4 ~C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~-~~~L~ 81 (306)
T 2z66_A 4 RCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFG-TTSLK 81 (306)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHS-CSCCC
T ss_pred CCeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCccccccc-ccccC
Confidence 466899999997532 357999999999999 5555 4799999999999999998 445777765 99999
Q ss_pred EEEeeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCC-ccccccccccccccccccccCCCCCCCc--cccccccccCC
Q 007088 135 SLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIP-PQLGLLNRIKTFSVASNLLTGPVPSFAN--VNFTAEDFANN 211 (618)
Q Consensus 135 ~L~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p-~~l~~~~~L~~l~l~~N~l~g~ip~~~~--~~~~~~~~~~n 211 (618)
+|+|++|.++ .+|..+..+++|+.|+|++|++++..+ ..+..+++|+.|++++|.+++.+|.... .++..+++++|
T Consensus 82 ~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 160 (306)
T 2z66_A 82 YLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGN 160 (306)
T ss_dssp EEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTC
T ss_pred EEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCC
Confidence 9999999999 688889999999999999999997554 5788999999999999999988886432 25667777777
Q ss_pred C
Q 007088 212 S 212 (618)
Q Consensus 212 ~ 212 (618)
.
T Consensus 161 ~ 161 (306)
T 2z66_A 161 S 161 (306)
T ss_dssp E
T ss_pred c
Confidence 4
No 297
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.55 E-value=1.4e-14 Score=161.73 Aligned_cols=131 Identities=22% Similarity=0.243 Sum_probs=107.2
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
+.+++.|+|++|++++..|..|.++++|++|+|++|++++..|..+. ++++|++|+|++|++++..|..|++|++|++|
T Consensus 31 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~-~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 109 (606)
T 3vq2_A 31 PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWH-GLHHLSNLILTGNPIQSFSPGSFSGLTSLENL 109 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTT-TCTTCCEEECTTCCCCCCCTTSSTTCTTCCEE
T ss_pred CCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhh-chhhcCEeECCCCcccccChhhcCCcccCCEE
Confidence 36788999999999988888899999999999999999965565555 49999999999999998778889999999999
Q ss_pred EccCcccCCCCCccccccccccccccccccccC-CCCCCCc-c-ccccccccCCC
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTG-PVPSFAN-V-NFTAEDFANNS 212 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g-~ip~~~~-~-~~~~~~~~~n~ 212 (618)
+|++|++++..|..++++++|++|++++|++++ .+|.... + ++..+++++|.
T Consensus 110 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~ 164 (606)
T 3vq2_A 110 VAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNY 164 (606)
T ss_dssp ECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSC
T ss_pred EccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCc
Confidence 999999987776788888899999999998886 6675332 1 45666677664
No 298
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.55 E-value=7.7e-15 Score=164.32 Aligned_cols=135 Identities=19% Similarity=0.243 Sum_probs=120.3
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccc-cCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGS-IPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~-ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
..+..++++.|.+.+..|..+..+++|+.|+|++|++.+. +|..+. .+++|++|+|++|++++.+|..|++|++|+.|
T Consensus 445 ~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~-~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L 523 (635)
T 4g8a_A 445 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFT-ELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 523 (635)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCT-TCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cccccccccccccccccccccccchhhhhhhhhhcccccccCchhhh-hccccCEEECCCCccCCcChHHHcCCCCCCEE
Confidence 4678899999999999999999999999999999986544 555554 59999999999999999889999999999999
Q ss_pred EccCcccCCCCCccccccccccccccccccccCCCCCCCc---cccccccccCCCCCCCC
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN---VNFTAEDFANNSGLCGK 217 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~---~~~~~~~~~~n~~~c~~ 217 (618)
+|++|+|++..|..+..+++|+.|+|++|+|++.+|.... .++..+++++|++.|.+
T Consensus 524 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 524 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp ECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred ECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 9999999998888999999999999999999999997543 25778899999999965
No 299
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.54 E-value=4.6e-15 Score=154.69 Aligned_cols=135 Identities=22% Similarity=0.176 Sum_probs=113.3
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
..+++.|+|++|+|++..|..|.++++|++|+|++|+|+ .+|...+..+++|+.|+|++|++++..|..+.++++|+.|
T Consensus 63 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 141 (361)
T 2xot_A 63 LTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLH-TLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKL 141 (361)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred ccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCC-cCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEE
Confidence 467999999999999888889999999999999999999 5666555569999999999999998778899999999999
Q ss_pred EccCcccCCCCCccc----cccccccccccccccccCCCCCCCc-c---ccccccccCCCCCCCC
Q 007088 161 KLNNNRFTGKIPPQL----GLLNRIKTFSVASNLLTGPVPSFAN-V---NFTAEDFANNSGLCGK 217 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l----~~~~~L~~l~l~~N~l~g~ip~~~~-~---~~~~~~~~~n~~~c~~ 217 (618)
+|++|+|++ +|..+ ..+++|+.|+|++|+|++..+.... + .+..+++.+|++.|.+
T Consensus 142 ~L~~N~l~~-l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 142 YLSQNQISR-FPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp ECCSSCCCS-CCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred ECCCCcCCe-eCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCc
Confidence 999999995 66554 6799999999999999975543221 1 1356889999999864
No 300
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.54 E-value=1.8e-14 Score=144.17 Aligned_cols=130 Identities=21% Similarity=0.229 Sum_probs=110.6
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
..++.|+|++|++++..+..+.++++|++|+|++|++++ +|...+.++++|++|+|++|++++..|..++++++|+.|+
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCc-cCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 468999999999998888799999999999999999995 5543334599999999999999987778899999999999
Q ss_pred ccCcccCCCCCccccccccccccccccccccC-CCCCCCc--cccccccccCCC
Q 007088 162 LNNNRFTGKIPPQLGLLNRIKTFSVASNLLTG-PVPSFAN--VNFTAEDFANNS 212 (618)
Q Consensus 162 l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g-~ip~~~~--~~~~~~~~~~n~ 212 (618)
+++|++++..+..++.+++|+.|++++|++++ .+|.... .++..+++++|.
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~ 160 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSC
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCC
Confidence 99999998777789999999999999999988 4675432 256777888884
No 301
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.54 E-value=4.5e-15 Score=168.56 Aligned_cols=109 Identities=28% Similarity=0.416 Sum_probs=66.0
Q ss_pred EEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEcc
Q 007088 84 VLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLN 163 (618)
Q Consensus 84 v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~ 163 (618)
++.|+|++|.+. .+|..+++|++|++|+|++|.|+ .||..++. |++|++|+|++|+|+ .||.+|++|++|++|+|+
T Consensus 226 L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~-l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~ 301 (727)
T 4b8c_D 226 WHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKN-LSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFF 301 (727)
T ss_dssp CCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGG-GTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECC
T ss_pred CcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhC-CCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECC
Confidence 344555555555 55555556666666666666666 56655543 666666666666666 556666666666666666
Q ss_pred CcccCCCCCccccccccccccccccccccCCCCC
Q 007088 164 NNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPS 197 (618)
Q Consensus 164 ~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~ 197 (618)
+|+|+ .||..|+.+++|+.|+|++|.|+|.+|.
T Consensus 302 ~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~ 334 (727)
T 4b8c_D 302 DNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLK 334 (727)
T ss_dssp SSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHH
T ss_pred CCCCC-ccChhhhcCCCccEEeCCCCccCCCChH
Confidence 66665 5565566666666666666666666654
No 302
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.54 E-value=1.4e-14 Score=144.85 Aligned_cols=118 Identities=22% Similarity=0.252 Sum_probs=105.3
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
..+++.|+|++|++++..|..++++++|++|+|++|++++ +|+..+.++++|+.|+|++|++++..|..++++++|+.|
T Consensus 108 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 186 (272)
T 3rfs_A 108 LTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQS-LPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDL 186 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCc-cCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEE
Confidence 3579999999999998777789999999999999999994 555554459999999999999997666678999999999
Q ss_pred EccCcccCCCCCccccccccccccccccccccCCCCCCC
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFA 199 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~ 199 (618)
+|++|++++..|..++.+++|+.|++++|.++|..|...
T Consensus 187 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l~ 225 (272)
T 3rfs_A 187 RLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIR 225 (272)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred ECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCcHHH
Confidence 999999998888888999999999999999999988643
No 303
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.54 E-value=1.1e-14 Score=139.29 Aligned_cols=117 Identities=22% Similarity=0.249 Sum_probs=101.7
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
..+++.|+|++|++++..+..+.++++|++|+|++|+++ .+|...+.++++|++|+|++|++++..|..+.++++|+.|
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 129 (208)
T 2o6s_A 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDL 129 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCC-ccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEE
Confidence 357999999999999666666899999999999999999 5666654559999999999999996655668999999999
Q ss_pred EccCcccCCCCCccccccccccccccccccccCCCCCC
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSF 198 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~ 198 (618)
+|++|++++..+..+..+++|+.|++++|.+++..|..
T Consensus 130 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l 167 (208)
T 2o6s_A 130 RLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGI 167 (208)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTTTT
T ss_pred ECCCCccceeCHHHhccCCCccEEEecCCCeecCCCCH
Confidence 99999999766666899999999999999999988854
No 304
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.54 E-value=7.9e-15 Score=161.58 Aligned_cols=110 Identities=27% Similarity=0.318 Sum_probs=103.0
Q ss_pred cEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEc
Q 007088 83 KVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKL 162 (618)
Q Consensus 83 ~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l 162 (618)
.++.|+|++|+|++ +|. +++|++|+.|+|++|+|+ .||..++. |++|+.|+|++|+|++ || .+++|++|+.|+|
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~-l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~L 515 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA-LRCLEVLQASDNALEN-VD-GVANLPRLQELLL 515 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG-CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEEC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc-CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEEC
Confidence 47789999999997 776 999999999999999999 99998876 9999999999999996 88 8999999999999
Q ss_pred cCcccCCCC-CccccccccccccccccccccCCCCCC
Q 007088 163 NNNRFTGKI-PPQLGLLNRIKTFSVASNLLTGPVPSF 198 (618)
Q Consensus 163 ~~N~l~g~~-p~~l~~~~~L~~l~l~~N~l~g~ip~~ 198 (618)
++|+|++.+ |..++.+++|+.|+|++|.|++.+|..
T Consensus 516 s~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 516 CNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp CSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred CCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 999999887 999999999999999999999998854
No 305
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.53 E-value=2.2e-14 Score=160.08 Aligned_cols=141 Identities=18% Similarity=0.117 Sum_probs=121.0
Q ss_pred ccceecCCCC--------CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCC
Q 007088 71 FTGVDCWHPD--------ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNS 142 (618)
Q Consensus 71 w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~ 142 (618)
+..|.|.... +..++.|+|++|++++..|..|+++++|++|+|++|++.+..|..+.. +++|++|+|++|+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~-l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQS-QHRLDTLVLTANP 92 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTT-CTTCCEEECTTCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccC-ccccCeeeCCCCc
Confidence 4457785432 457899999999999998999999999999999999999766777765 9999999999999
Q ss_pred CcccCCCCCcCCCCCcEEEccCcccCCCCCccccccccccccccccccccC-CCCCCCcc-ccccccccCCC
Q 007088 143 LSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTG-PVPSFANV-NFTAEDFANNS 212 (618)
Q Consensus 143 l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g-~ip~~~~~-~~~~~~~~~n~ 212 (618)
+++..|..++++++|++|+|++|++++..|..++++++|++|++++|++++ .+|.+... ++..+++++|.
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 164 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNA 164 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSC
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCc
Confidence 998889999999999999999999998668889999999999999999998 55655432 56667777774
No 306
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.53 E-value=2.9e-14 Score=143.86 Aligned_cols=127 Identities=25% Similarity=0.252 Sum_probs=98.3
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
..++.|+|++|++++..|..+.++++|++|+|++|.++ .+|.. . .+++|++|+|++|+++ .+|..+..+++|+.|+
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~-~-~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~ 106 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQVD-G-TLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLD 106 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEECC-S-CCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEE
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccC-cccCC-C-CCCcCCEEECCCCcCC-cCchhhccCCCCCEEE
Confidence 56888999999998888888888888888888888888 45554 3 4888888888888888 6788888888888888
Q ss_pred ccCcccCCCCCccccccccccccccccccccCCCCCCCc--cccccccccCCC
Q 007088 162 LNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN--VNFTAEDFANNS 212 (618)
Q Consensus 162 l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~--~~~~~~~~~~n~ 212 (618)
|++|+|++..|..|..+++|+.|+|++|++++..|.... .++..+++++|.
T Consensus 107 l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 107 VSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp CCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred CCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 888888866667788888888888888888876664322 256666777774
No 307
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.52 E-value=2.2e-14 Score=139.53 Aligned_cols=115 Identities=23% Similarity=0.269 Sum_probs=102.7
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
..+++.|+|++|+|++..+..+.++++|+.|+|++|+|+ .+|...+..+++|++|+|++|+|+ .||..+..+++|+.|
T Consensus 63 l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 140 (229)
T 3e6j_A 63 LINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHL 140 (229)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEE
T ss_pred ccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCC-ccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEE
Confidence 357999999999997555566899999999999999999 566665556999999999999999 899999999999999
Q ss_pred EccCcccCCCCCccccccccccccccccccccCCCCC
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPS 197 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~ 197 (618)
+|++|+|++..+..+..+++|+.|+|++|.+++..+.
T Consensus 141 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 177 (229)
T 3e6j_A 141 ALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECRD 177 (229)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBGG
T ss_pred ECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcch
Confidence 9999999976667799999999999999999987763
No 308
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.52 E-value=2.2e-14 Score=155.29 Aligned_cols=142 Identities=18% Similarity=0.133 Sum_probs=120.1
Q ss_pred cccceecCCCC--------CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCC
Q 007088 70 QFTGVDCWHPD--------ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSN 141 (618)
Q Consensus 70 ~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N 141 (618)
.|..|.|.... +..++.|+|++|++++..|..|.++++|++|+|++|.+++..|..+.+ +++|++|+|++|
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-l~~L~~L~L~~n 90 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNN-LFNLRTLGLRSN 90 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTT-CTTCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhC-CccCCEEECCCC
Confidence 36788886432 357889999999999988999999999999999999999766777765 999999999999
Q ss_pred CCcccCCCCCcCCCCCcEEEccCcccCCCCCccccccccccccccccccccCCCCCCCc--cccccccccCCC
Q 007088 142 SLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN--VNFTAEDFANNS 212 (618)
Q Consensus 142 ~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~--~~~~~~~~~~n~ 212 (618)
++++..+..++++++|+.|+|++|++++..|..+..+++|+.|++++|.+++..|.... .++..+++++|.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 163 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCN 163 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCC
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCc
Confidence 99954445589999999999999999998899999999999999999999988775432 156677777774
No 309
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.52 E-value=3.4e-15 Score=171.38 Aligned_cols=143 Identities=13% Similarity=0.165 Sum_probs=115.6
Q ss_pred CcccceecCCCCCCcEEEEEecCCccee-----------------eCCcCCC--CCCCCCeEEccCCcCccccCchhhhc
Q 007088 69 CQFTGVDCWHPDENKVLNIRLSDMGLKG-----------------QFPRGIE--RCTSLTGLDLSSNNLSGSIPSDISSR 129 (618)
Q Consensus 69 c~w~gv~c~~~~~~~v~~l~l~~~~l~g-----------------~~p~~~~--~l~~L~~L~l~~n~l~g~ip~~~~~~ 129 (618)
+...|+.-.-....+++.|+|++|+|+| .+|++++ +|++|++|+|++|++.|.+|..++.
T Consensus 435 N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~- 513 (876)
T 4ecn_A 435 NRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYD- 513 (876)
T ss_dssp CEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGG-
T ss_pred CcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhC-
Confidence 4455554322234678899999999998 5999988 9999999999999999999988875
Q ss_pred CCCCCEEEeeCCC-Ccc-cCCCCCcCCC-------CCcEEEccCcccCCCCCc--cccccccccccccccccccCCCCCC
Q 007088 130 LQYVTSLDLSSNS-LSG-EIPSGLANCT-------FLNVLKLNNNRFTGKIPP--QLGLLNRIKTFSVASNLLTGPVPSF 198 (618)
Q Consensus 130 l~~L~~L~l~~N~-l~g-~ip~~~~~l~-------~L~~l~l~~N~l~g~~p~--~l~~~~~L~~l~l~~N~l~g~ip~~ 198 (618)
|++|+.|+|++|+ |+| .+|..+++++ +|+.|+|++|+|+ .+|. .++++++|+.|+|++|+++ .+|.+
T Consensus 514 L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~ 591 (876)
T 4ecn_A 514 LPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAF 591 (876)
T ss_dssp CSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCC
T ss_pred CCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhh
Confidence 9999999999998 998 8888776665 8999999999999 8888 8999999999999999998 88854
Q ss_pred Ccc-ccccccccCCCCC
Q 007088 199 ANV-NFTAEDFANNSGL 214 (618)
Q Consensus 199 ~~~-~~~~~~~~~n~~~ 214 (618)
..+ ++..+++++|...
T Consensus 592 ~~L~~L~~L~Ls~N~l~ 608 (876)
T 4ecn_A 592 GTNVKLTDLKLDYNQIE 608 (876)
T ss_dssp CTTSEESEEECCSSCCS
T ss_pred cCCCcceEEECcCCccc
Confidence 432 5667778877543
No 310
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.52 E-value=1.8e-14 Score=167.11 Aligned_cols=140 Identities=19% Similarity=0.186 Sum_probs=111.3
Q ss_pred CcccceecCCCCCCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCC
Q 007088 69 CQFTGVDCWHPDENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIP 148 (618)
Q Consensus 69 c~w~gv~c~~~~~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip 148 (618)
|.|+.|.+ .+.+++.|+|++|.+++..|..|.+|++|++|+|++|.+.+.|+++.+.++++|++|+|++|++++..|
T Consensus 14 ~~L~~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 14 CNLTQVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP 90 (844)
T ss_dssp CCSSCCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT
T ss_pred CCCCCCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH
Confidence 56888877 357899999999999988888899999999999999988878855444568999999999999988788
Q ss_pred CCCcCCCCCcEEEccCcccCCCCCcc--ccccccccccccccccccCCCCC--CCcc-ccccccccCC
Q 007088 149 SGLANCTFLNVLKLNNNRFTGKIPPQ--LGLLNRIKTFSVASNLLTGPVPS--FANV-NFTAEDFANN 211 (618)
Q Consensus 149 ~~~~~l~~L~~l~l~~N~l~g~~p~~--l~~~~~L~~l~l~~N~l~g~ip~--~~~~-~~~~~~~~~n 211 (618)
..+++|++|++|+|++|++++.+|.. ++++++|+.|+|++|.+++..|. +..+ ++..+++++|
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N 158 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSN 158 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESS
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCC
Confidence 88889999999999999988877765 88888888888888888887653 2221 4445555555
No 311
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.51 E-value=4.5e-14 Score=131.06 Aligned_cols=107 Identities=22% Similarity=0.274 Sum_probs=91.6
Q ss_pred EEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCC-CCcCCCCCcEEEcc
Q 007088 85 LNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPS-GLANCTFLNVLKLN 163 (618)
Q Consensus 85 ~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~-~~~~l~~L~~l~l~ 163 (618)
+.+++++|+|+ .+|..+. ++|+.|+|++|+|++..|..+. ++++|++|+|++|+|++ +|. .++++++|+.|+|+
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~-i~~~~~~~l~~L~~L~L~ 89 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFD-HLVNLQQLYFNSNKLTA-IPTGVFDKLTQLTQLDLN 89 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTT-TCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECC
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhc-CCcCCCEEECCCCCCCc-cChhHhCCcchhhEEECC
Confidence 46888999995 8898875 8999999999999976666665 49999999999999996 555 46899999999999
Q ss_pred CcccCCCCCccccccccccccccccccccCCCC
Q 007088 164 NNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVP 196 (618)
Q Consensus 164 ~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip 196 (618)
+|+|++..|..+..+++|+.|+|++|.++...+
T Consensus 90 ~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 90 DNHLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred CCccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 999996555569999999999999999986654
No 312
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.51 E-value=3.2e-14 Score=142.37 Aligned_cols=112 Identities=16% Similarity=0.176 Sum_probs=58.3
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
.+++.|+|++|++++..+..+.++++|++|+|++|++++..|..+. ++++|++|+|++|++++..+..++++++|+.|+
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFS-GLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTT-TCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhc-CCccccEEECCCCCccccCchhcccCCCCCEEE
Confidence 3455555555555554444555555555555555555533333333 255555555555555543333455555555555
Q ss_pred ccCcccCC-CCCccccccccccccccccccccCC
Q 007088 162 LNNNRFTG-KIPPQLGLLNRIKTFSVASNLLTGP 194 (618)
Q Consensus 162 l~~N~l~g-~~p~~l~~~~~L~~l~l~~N~l~g~ 194 (618)
|++|++++ .+|..++.+++|+.|++++|++++.
T Consensus 131 l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~ 164 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164 (276)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEE
T ss_pred CcCCccceecCchhhccCCCCCEEECCCCCCCcC
Confidence 55555554 2455555555555555555555543
No 313
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.50 E-value=8.5e-14 Score=143.25 Aligned_cols=143 Identities=20% Similarity=0.265 Sum_probs=120.3
Q ss_pred CCCCcccceecCCCC--------CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEE
Q 007088 66 GFICQFTGVDCWHPD--------ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLD 137 (618)
Q Consensus 66 ~~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~ 137 (618)
++.|.|..+.|.... ..+++.|+|++|++++..|..+.++++|++|+|++|++++..|..+.. +++|++|+
T Consensus 30 ~c~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~ 108 (332)
T 2ft3_A 30 GCHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSP-LRKLQKLY 108 (332)
T ss_dssp SCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTT-CTTCCEEE
T ss_pred CCcccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhC-cCCCCEEE
Confidence 455889999996432 347899999999999888889999999999999999999766777765 99999999
Q ss_pred eeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCCcccccccccccccccccccc--CCCCCC-CccccccccccCCC
Q 007088 138 LSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLT--GPVPSF-ANVNFTAEDFANNS 212 (618)
Q Consensus 138 l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~--g~ip~~-~~~~~~~~~~~~n~ 212 (618)
|++|+++ .+|..+. ++|++|+|++|++++..+..+..+++|+.|++++|.++ |..|.. ...++..+++++|.
T Consensus 109 L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~ 183 (332)
T 2ft3_A 109 ISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAK 183 (332)
T ss_dssp CCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSB
T ss_pred CCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCC
Confidence 9999999 7998876 89999999999999766667999999999999999996 355543 33366777787775
No 314
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.50 E-value=6.1e-14 Score=150.26 Aligned_cols=142 Identities=16% Similarity=0.158 Sum_probs=114.1
Q ss_pred ccceecCCCC--------CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCC
Q 007088 71 FTGVDCWHPD--------ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNS 142 (618)
Q Consensus 71 w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~ 142 (618)
|..|.|.+.. ...++.|+|++|++++..+..|.++++|++|+|++|++++ ++...+.++++|++|+|++|+
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~-i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRT-IEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCE-ECGGGGTTCSSCCEEECCSSC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCc-cChhhccCCccCCEEECCCCc
Confidence 5678886532 3568899999999999999999999999999999999995 554444559999999999999
Q ss_pred CcccCCCCCcCCCCCcEEEccCcccCCCCCccccccccccccccccccccCCCCC--CCcc-ccccccccCCCC
Q 007088 143 LSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPS--FANV-NFTAEDFANNSG 213 (618)
Q Consensus 143 l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~--~~~~-~~~~~~~~~n~~ 213 (618)
+++..+..+..+++|+.|+|++|+|++..+..+..+++|+.|+|++|+..+.+|. +..+ ++..+++++|..
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l 197 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNL 197 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCC
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcC
Confidence 9955455799999999999999999976667888999999999998766666664 2221 566677777743
No 315
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.50 E-value=1.3e-14 Score=164.87 Aligned_cols=174 Identities=23% Similarity=0.257 Sum_probs=105.7
Q ss_pred CCcchHHHHHHHHHhccCCCCccccCccCCCCCCCCCCcccceecCCC---------------CCCcEEEEEecCCccee
Q 007088 32 ATLNDIECLKSVKNSLEDPFNYLTTSWNFNNNTEGFICQFTGVDCWHP---------------DENKVLNIRLSDMGLKG 96 (618)
Q Consensus 32 ~~~~~~~~L~~~k~~~~~~~~~l~~~W~~~~~~~~~~c~w~gv~c~~~---------------~~~~v~~l~l~~~~l~g 96 (618)
....+..+|+++..+...+...-...|... ....+.|.++.++.. ....+..++|+.|.|.+
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~ 205 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGD---STPSGTATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDE 205 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCC---CCccccCCCceecCCccceEEeeCCCCCcchhhHhhcCccCcccccC
Confidence 345678889888888744322222245322 123456666544321 12344555666655544
Q ss_pred ---------eCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEccCccc
Q 007088 97 ---------QFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRF 167 (618)
Q Consensus 97 ---------~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l 167 (618)
..|..+..++.|+.|+|++|.+. .||..++. +++|++|+|++|+|+ .||..|++|++|++|+|++|+|
T Consensus 206 ~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~-l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l 282 (727)
T 4b8c_D 206 DDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFK-YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRL 282 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCS-CCCGGGGG-CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCC
T ss_pred ccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcC-CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcC
Confidence 34777899999999999999999 89999885 999999999999999 8999999999999999999999
Q ss_pred CCCCCccccccccccccccccccccCCCCCC-Ccc-ccccccccCCCC
Q 007088 168 TGKIPPQLGLLNRIKTFSVASNLLTGPVPSF-ANV-NFTAEDFANNSG 213 (618)
Q Consensus 168 ~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~-~~~-~~~~~~~~~n~~ 213 (618)
+ .||..|+.|++|++|+|++|.|+ .||.. ..+ ++..+++++|..
T Consensus 283 ~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l 328 (727)
T 4b8c_D 283 T-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPL 328 (727)
T ss_dssp S-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCC
T ss_pred C-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCcc
Confidence 9 88999999999999999999997 66753 332 567778888864
No 316
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.49 E-value=6e-14 Score=158.83 Aligned_cols=143 Identities=22% Similarity=0.233 Sum_probs=113.9
Q ss_pred CCcccceecCCC--------CCCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEee
Q 007088 68 ICQFTGVDCWHP--------DENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLS 139 (618)
Q Consensus 68 ~c~w~gv~c~~~--------~~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~ 139 (618)
.|.++.|.|... -+.+++.|+|++|++++..+..++++++|++|+|++|.+++..|..+.. +++|++|+|+
T Consensus 3 ~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~L~ 81 (680)
T 1ziw_A 3 TVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQK-LPMLKVLNLQ 81 (680)
T ss_dssp -CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHH-CTTCCEEECC
T ss_pred eeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhc-ccCcCEEECC
Confidence 345555666432 1357899999999999877778999999999999999999766766655 9999999999
Q ss_pred CCCCcccCCC-CCcCCCCCcEEEccCcccCCCCCccccccccccccccccccccCCCCCCCc--cccccccccCCC
Q 007088 140 SNSLSGEIPS-GLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN--VNFTAEDFANNS 212 (618)
Q Consensus 140 ~N~l~g~ip~-~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~--~~~~~~~~~~n~ 212 (618)
+|++++ +|. .++++++|++|+|++|++++..|..++++++|++|++++|.+++.+|.... .++..+++++|.
T Consensus 82 ~n~l~~-l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 156 (680)
T 1ziw_A 82 HNELSQ-LSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNK 156 (680)
T ss_dssp SSCCCC-CCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSC
T ss_pred CCccCc-cChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCc
Confidence 999994 555 689999999999999999877778899999999999999999988876432 145666666664
No 317
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.49 E-value=4e-14 Score=156.69 Aligned_cols=135 Identities=17% Similarity=0.207 Sum_probs=104.5
Q ss_pred cEEEEEecCCcceeeCC-cCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCc-ccCCCCCcCCCCCcEE
Q 007088 83 KVLNIRLSDMGLKGQFP-RGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLS-GEIPSGLANCTFLNVL 160 (618)
Q Consensus 83 ~v~~l~l~~~~l~g~~p-~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~-g~ip~~~~~l~~L~~l 160 (618)
+++.|+|++|.+.+..| ..+.++++|++|+|++|.+.+.+|..+.. +++|+.|+|++|+++ |.+|..++.+++|+.|
T Consensus 397 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L 475 (570)
T 2z63_A 397 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG-LSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 475 (570)
T ss_dssp TCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTT-CTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhc-CCcCcEEECcCCcCccccchhhhhcccCCCEE
Confidence 45566666666666555 45778888888888888888777766654 888888888888887 6788888888888888
Q ss_pred EccCcccCCCCCccccccccccccccccccccCCCCCCCc--cccccccccCCCCCCCCC
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN--VNFTAEDFANNSGLCGKP 218 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~--~~~~~~~~~~n~~~c~~~ 218 (618)
+|++|++++..|..+..+++|+.|++++|++++.+|.... .++..+++++|+..|.++
T Consensus 476 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 476 DLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 8888888887788888888888888888888888775432 256777888888877644
No 318
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.49 E-value=2.6e-14 Score=148.52 Aligned_cols=144 Identities=22% Similarity=0.270 Sum_probs=112.4
Q ss_pred CCCCcccceecCCC----------CCCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCE
Q 007088 66 GFICQFTGVDCWHP----------DENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTS 135 (618)
Q Consensus 66 ~~~c~w~gv~c~~~----------~~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~ 135 (618)
.+.|.|.|+ |+-. -..+++.|+|++|++++..+..+.++++|++|+|++|++++..|..+.. +++|++
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~ 104 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSS-LGSLEH 104 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTT-CTTCCE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCC-CCCCCE
Confidence 356888887 5321 1247899999999999877778999999999999999999655655654 999999
Q ss_pred EEeeCCCCcccCCCC-CcCCCCCcEEEccCcccCCCCCc--ccccccccccccccccc-ccCCCCCCC-cc-cccccccc
Q 007088 136 LDLSSNSLSGEIPSG-LANCTFLNVLKLNNNRFTGKIPP--QLGLLNRIKTFSVASNL-LTGPVPSFA-NV-NFTAEDFA 209 (618)
Q Consensus 136 L~l~~N~l~g~ip~~-~~~l~~L~~l~l~~N~l~g~~p~--~l~~~~~L~~l~l~~N~-l~g~ip~~~-~~-~~~~~~~~ 209 (618)
|+|++|++++ +|.. ++++++|++|+|++|++++ +|. .+..+++|+.|++++|+ +++..|... .. ++..++++
T Consensus 105 L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~ 182 (353)
T 2z80_A 105 LDLSYNYLSN-LSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEID 182 (353)
T ss_dssp EECCSSCCSS-CCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEE
T ss_pred EECCCCcCCc-CCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECC
Confidence 9999999994 6655 8899999999999999994 665 78899999999999995 555545432 21 56677787
Q ss_pred CCCC
Q 007088 210 NNSG 213 (618)
Q Consensus 210 ~n~~ 213 (618)
+|..
T Consensus 183 ~n~l 186 (353)
T 2z80_A 183 ASDL 186 (353)
T ss_dssp ETTC
T ss_pred CCCc
Confidence 7753
No 319
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.49 E-value=5.5e-14 Score=150.61 Aligned_cols=133 Identities=22% Similarity=0.226 Sum_probs=87.0
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCC-------------------------CCeEEccCCcCccccCchhhhcCCCCCEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTS-------------------------LTGLDLSSNNLSGSIPSDISSRLQYVTSL 136 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~-------------------------L~~L~l~~n~l~g~ip~~~~~~l~~L~~L 136 (618)
.+++.|+|++|++++..+..+.++++ |++|+|++|+++ .+|. +. .+++|+.|
T Consensus 136 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~-~~-~l~~L~~L 212 (440)
T 3zyj_A 136 SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN-LT-PLIKLDEL 212 (440)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCC-CT-TCSSCCEE
T ss_pred ccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cccc-cC-CCcccCEE
Confidence 46778888888777554444554444 455555555554 3443 22 25666666
Q ss_pred EeeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCCccccccccccccccccccccCCCCCCCc--cccccccccCCCCC
Q 007088 137 DLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN--VNFTAEDFANNSGL 214 (618)
Q Consensus 137 ~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~--~~~~~~~~~~n~~~ 214 (618)
+|++|++++..|..+.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+.... .++..+++++|++.
T Consensus 213 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 213 DLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 6666666665566677777777777777777766677777777777888888887766664332 15667788888888
Q ss_pred CCC
Q 007088 215 CGK 217 (618)
Q Consensus 215 c~~ 217 (618)
|.+
T Consensus 293 CdC 295 (440)
T 3zyj_A 293 CNC 295 (440)
T ss_dssp CSS
T ss_pred CCC
Confidence 864
No 320
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.48 E-value=5.1e-14 Score=137.79 Aligned_cols=145 Identities=17% Similarity=0.184 Sum_probs=116.0
Q ss_pred CCCCcc-ccee--cCCC-----CCCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCc-CccccCchhhhcCCCCCEE
Q 007088 66 GFICQF-TGVD--CWHP-----DENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNN-LSGSIPSDISSRLQYVTSL 136 (618)
Q Consensus 66 ~~~c~w-~gv~--c~~~-----~~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~-l~g~ip~~~~~~l~~L~~L 136 (618)
.+.|.+ .++. |... .+..++.|+|++|++++..+..+.++++|++|+|++|+ ++ .+|+..+.++++|++|
T Consensus 7 ~C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L 85 (239)
T 2xwt_C 7 PCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQ-QLESHSFYNLSKVTHI 85 (239)
T ss_dssp SCSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCC-EECTTTEESCTTCCEE
T ss_pred CCeeCCCCcceeEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEE
Confidence 344544 5544 8531 13478999999999998777789999999999999997 77 6776555569999999
Q ss_pred EeeC-CCCcccCCCCCcCCCCCcEEEccCcccCCCCCcccccccccc---ccccccc-cccCCCCCCC-cc-ccc-cccc
Q 007088 137 DLSS-NSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIK---TFSVASN-LLTGPVPSFA-NV-NFT-AEDF 208 (618)
Q Consensus 137 ~l~~-N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~---~l~l~~N-~l~g~ip~~~-~~-~~~-~~~~ 208 (618)
+|++ |++++..|..+.++++|+.|+|++|++++ +|. ++.+++|+ .|++++| ++++..|... .. ++. .+++
T Consensus 86 ~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l 163 (239)
T 2xwt_C 86 EIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKL 163 (239)
T ss_dssp EEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEEC
T ss_pred ECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEc
Confidence 9999 99996555678999999999999999996 887 88888888 9999999 8988776533 22 566 7888
Q ss_pred cCCCC
Q 007088 209 ANNSG 213 (618)
Q Consensus 209 ~~n~~ 213 (618)
++|..
T Consensus 164 ~~n~l 168 (239)
T 2xwt_C 164 YNNGF 168 (239)
T ss_dssp CSCCC
T ss_pred CCCCC
Confidence 88853
No 321
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.48 E-value=3.2e-14 Score=158.81 Aligned_cols=134 Identities=22% Similarity=0.214 Sum_probs=94.4
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccc-cC--chhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCc
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGS-IP--SDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLN 158 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~-ip--~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~ 158 (618)
.+++.|+|++|.+++..|..++.+++|++|+|++|.+.+. +| ..+. .+++|++|+|++|++++..|..++++++|+
T Consensus 425 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~-~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 503 (606)
T 3t6q_A 425 HLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQ-TLGRLEILVLSFCDLSSIDQHAFTSLKMMN 503 (606)
T ss_dssp TTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGG-GCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhc-cCCCccEEECCCCccCccChhhhccccCCC
Confidence 3566677777777666666677777777777777777652 22 3343 377777777777777776677777777788
Q ss_pred EEEccCcccCCCCCccccccccccccccccccccCCCCCCCc--cccccccccCCCCCCCC
Q 007088 159 VLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN--VNFTAEDFANNSGLCGK 217 (618)
Q Consensus 159 ~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~--~~~~~~~~~~n~~~c~~ 217 (618)
.|+|++|++++.+|..+.++++| .|++++|++++.+|.... .++..+++++|++.|.+
T Consensus 504 ~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 504 HVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp EEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred EEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccC
Confidence 88888888777777777777777 777888888777765322 15667788888887753
No 322
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.48 E-value=1.7e-14 Score=167.35 Aligned_cols=133 Identities=22% Similarity=0.193 Sum_probs=106.1
Q ss_pred CcEEEEEecCCcceeeCCc-CCCCCCCCCeEEccCCcCc-----cccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCC
Q 007088 82 NKVLNIRLSDMGLKGQFPR-GIERCTSLTGLDLSSNNLS-----GSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCT 155 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~-~~~~l~~L~~L~l~~n~l~-----g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~ 155 (618)
.+++.|+|++|++++..+. .+..+++|+.|+|++|.++ +..|..+ ..+++|+.|+|++|++++..|..+.+++
T Consensus 426 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 504 (844)
T 3j0a_A 426 PHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVF-EGLSHLQVLYLNHNYLNSLPPGVFSHLT 504 (844)
T ss_dssp TTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCS-SCBCCEECCCCCHHHHTTCCTTSSSSCC
T ss_pred CccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhh-cCcccccEEECCCCcccccChhHccchh
Confidence 4677788888888765443 3556788888888888886 3333334 3489999999999999988888889999
Q ss_pred CCcEEEccCcccCCCCCccccccccccccccccccccCCCCCCCccccccccccCCCCCCCCC
Q 007088 156 FLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFANVNFTAEDFANNSGLCGKP 218 (618)
Q Consensus 156 ~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n~~~c~~~ 218 (618)
+|+.|+|++|+|++..|..+. ++|+.|+|++|+|+|.+|.... ++..+++++|++.|.++
T Consensus 505 ~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~-~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 505 ALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV-SLSVLDITHNKFICECE 564 (844)
T ss_dssp SCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS-SCCEEEEEEECCCCSSS
T ss_pred hhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC-CcCEEEecCCCcccccc
Confidence 999999999999976666555 7899999999999999997665 67889999999999654
No 323
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.48 E-value=5.4e-14 Score=156.68 Aligned_cols=129 Identities=12% Similarity=0.107 Sum_probs=80.4
Q ss_pred cEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEc
Q 007088 83 KVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKL 162 (618)
Q Consensus 83 ~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l 162 (618)
.++.|++++|.+.+..+..+.++++|++|+|++|.+++..|..+.. +++|++|+|++|.+++..|..++++++|++|+|
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAY-AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcC-CCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 4556667776666444444566777777777777777544444443 777777777777777655556677777777777
Q ss_pred cCcccCCCCCccccccccccccccccccccCCCCCCCc--cccccccccCCC
Q 007088 163 NNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN--VNFTAEDFANNS 212 (618)
Q Consensus 163 ~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~--~~~~~~~~~~n~ 212 (618)
++|+|++..|..|+++++|++|+|++|.+++.+|.... .++..+++++|.
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 182 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNR 182 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSC
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCC
Confidence 77777743333456677777777777777766664322 145555666653
No 324
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.47 E-value=1.1e-13 Score=148.87 Aligned_cols=142 Identities=14% Similarity=0.113 Sum_probs=116.2
Q ss_pred ccceecCCCC--------CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCC
Q 007088 71 FTGVDCWHPD--------ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNS 142 (618)
Q Consensus 71 w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~ 142 (618)
|..|.|.+.. ..+++.|+|++|++++..|..|.++++|+.|+|++|++++..|..+. ++++|++|+|++|+
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~-~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFN-GLASLNTLELFDNW 134 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTT-TCTTCCEEECCSSC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhcc-CcccCCEEECCCCc
Confidence 5678886432 35789999999999999999999999999999999999965556555 59999999999999
Q ss_pred CcccCCCCCcCCCCCcEEEccCcccCCCCCccccccccccccccccccccCCCCC--CCc-cccccccccCCCC
Q 007088 143 LSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPS--FAN-VNFTAEDFANNSG 213 (618)
Q Consensus 143 l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~--~~~-~~~~~~~~~~n~~ 213 (618)
+++..|..++++++|+.|+|++|+|++..+..+..+++|+.|++++|+.-+.+|. +.. .++..+++++|..
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l 208 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNI 208 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcc
Confidence 9965556699999999999999999976666889999999999999766666664 222 1566777887754
No 325
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.47 E-value=5.9e-14 Score=133.04 Aligned_cols=125 Identities=14% Similarity=0.279 Sum_probs=76.5
Q ss_pred cEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEc
Q 007088 83 KVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKL 162 (618)
Q Consensus 83 ~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l 162 (618)
+++.|+|++|+++ .+| .+..+++|++|+|++|.+. .+| .+.. +++|++|+|++|++++..|..++.+++|+.|+|
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~~~-~l~~-l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-NYN-PISG-LSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-CCG-GGTT-CTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-cch-hhhc-CCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 4566666666666 555 4666666666666666554 232 4443 666666666666666666666666666666666
Q ss_pred cCcccCCCCCccccccccccccccccccccCCCCCCCcc-ccccccccCCC
Q 007088 163 NNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFANV-NFTAEDFANNS 212 (618)
Q Consensus 163 ~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~~-~~~~~~~~~n~ 212 (618)
++|++++..|..++.+++|+.|++++|.+.+.+|.+..+ ++..+++++|.
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n~ 170 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDG 170 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTBC
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCCC
Confidence 666666666666666666666666666644444433221 34555555553
No 326
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.47 E-value=4e-14 Score=156.64 Aligned_cols=133 Identities=23% Similarity=0.269 Sum_probs=79.0
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCcc--ccCchhhhcCCCCCEEEeeCCCCcccCCCC-CcCCC---
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSG--SIPSDISSRLQYVTSLDLSSNSLSGEIPSG-LANCT--- 155 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g--~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~-~~~l~--- 155 (618)
.+++.|+|++|++++.+|..++++++|+.|+|++|++++ .+|..+.. +++|+.|+|++|++++.+|.. +..++
T Consensus 353 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~-l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 353 SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKN-MSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTT-CTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcC-CCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 456677777777776666666666677777777666664 23333433 666666666666666555543 34444
Q ss_pred -------------------CCcEEEccCcccCCCCCccccccccccccccccccccCCCCC-CCcc-ccccccccCCCCC
Q 007088 156 -------------------FLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPS-FANV-NFTAEDFANNSGL 214 (618)
Q Consensus 156 -------------------~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~-~~~~-~~~~~~~~~n~~~ 214 (618)
+|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+. +..+ ++..+++++|++.
T Consensus 432 ~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 510 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWD 510 (562)
T ss_dssp EEECCSSCCCGGGGSSCCTTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBC
T ss_pred EEECCCCCCCcchhhhhcCcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcC
Confidence 5555555555555 4565555666677777777777632222 2221 4555667777766
Q ss_pred CC
Q 007088 215 CG 216 (618)
Q Consensus 215 c~ 216 (618)
|.
T Consensus 511 c~ 512 (562)
T 3a79_B 511 CT 512 (562)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 327
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.47 E-value=8e-14 Score=144.38 Aligned_cols=111 Identities=17% Similarity=0.177 Sum_probs=92.4
Q ss_pred CCcccceecCCCCCCcEEEEEecCC-cceeeCCcCCCCCCCCCeEEccC-CcCccccCchhhhcCCCCCEEEeeCCCCcc
Q 007088 68 ICQFTGVDCWHPDENKVLNIRLSDM-GLKGQFPRGIERCTSLTGLDLSS-NNLSGSIPSDISSRLQYVTSLDLSSNSLSG 145 (618)
Q Consensus 68 ~c~w~gv~c~~~~~~~v~~l~l~~~-~l~g~~p~~~~~l~~L~~L~l~~-n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g 145 (618)
.|.|..|.|. ++ +|+ .||. |..+++|+.|+|++ |+|++..|..+. +|++|+.|+|++|+|+|
T Consensus 7 ~C~~~~v~~~-------------~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~-~l~~L~~L~l~~N~l~~ 70 (347)
T 2ifg_A 7 PHGSSGLRCT-------------RDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLR-GLGELRNLTIVKSGLRF 70 (347)
T ss_dssp CSSSSCEECC-------------SSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSC-SCCCCSEEECCSSCCCE
T ss_pred cccCCEEEcC-------------CCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhc-cccCCCEEECCCCccce
Confidence 4888888884 34 677 4898 99999999999996 999954444554 59999999999999999
Q ss_pred cCCCCCcCCCCCcEEEccCcccCCCCCccccccccccccccccccccCCC
Q 007088 146 EIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPV 195 (618)
Q Consensus 146 ~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~i 195 (618)
..|..|++|++|+.|+|++|+|++..|..+..++ |+.|+|++|.|...-
T Consensus 71 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 71 VAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCSC 119 (347)
T ss_dssp ECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCCG
T ss_pred eCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCCC
Confidence 8888899999999999999999965555555555 999999999998643
No 328
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.47 E-value=2.4e-14 Score=146.13 Aligned_cols=131 Identities=15% Similarity=0.155 Sum_probs=109.7
Q ss_pred CcEEEEEecCCcceeeCCcCC--CCCCCCCeEEccCCcCccccCchhhhcC-----CCCCEEEeeCCCCcccCCCCCcCC
Q 007088 82 NKVLNIRLSDMGLKGQFPRGI--ERCTSLTGLDLSSNNLSGSIPSDISSRL-----QYVTSLDLSSNSLSGEIPSGLANC 154 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~--~~l~~L~~L~l~~n~l~g~ip~~~~~~l-----~~L~~L~l~~N~l~g~ip~~~~~l 154 (618)
.+++.|+|++|+++|.+|..+ +.+++|++|+|++|++++. |..+.. + ++|++|+|++|++++..|..++++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~-l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAE-LQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHH-HHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHH-HHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 578999999999999999987 8999999999999999976 877765 6 899999999999998777899999
Q ss_pred CCCcEEEccCcccCCC--CCccc--cccccccccccccccccC--CCCCCC--c-cccccccccCCCCC
Q 007088 155 TFLNVLKLNNNRFTGK--IPPQL--GLLNRIKTFSVASNLLTG--PVPSFA--N-VNFTAEDFANNSGL 214 (618)
Q Consensus 155 ~~L~~l~l~~N~l~g~--~p~~l--~~~~~L~~l~l~~N~l~g--~ip~~~--~-~~~~~~~~~~n~~~ 214 (618)
++|+.|+|++|++.|. +|..+ +.+++|+.|+|++|++++ .+|... . .++..+++++|...
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 241 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLR 241 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCC
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCC
Confidence 9999999999999886 35555 889999999999999984 333211 1 25777888888643
No 329
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.46 E-value=5.1e-14 Score=154.53 Aligned_cols=122 Identities=25% Similarity=0.438 Sum_probs=99.2
Q ss_pred cccce-ecCCCCCCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCC
Q 007088 70 QFTGV-DCWHPDENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIP 148 (618)
Q Consensus 70 ~w~gv-~c~~~~~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip 148 (618)
.|.|+ .|.. ++++.|+|++|+|++ +|..+. ++|+.|+|++|+|+ .|| . .+++|++|+|++|+|++ ||
T Consensus 49 ~~~~l~~C~~---~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip-~---~l~~L~~L~Ls~N~l~~-ip 116 (571)
T 3cvr_A 49 AVSLLKECLI---NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP-E---LPASLEYLDACDNRLST-LP 116 (571)
T ss_dssp HHHHHHHHHH---TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC-C---CCTTCCEEECCSSCCSC-CC
T ss_pred hhhhcccccc---CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc-c---ccCCCCEEEccCCCCCC-cc
Confidence 79999 7853 579999999999997 888774 78999999999999 788 2 37889999999999996 88
Q ss_pred CCCcCCCCCcEEEccCcccCCCCCccccccccccccccccccccCCCCCCCccccccccccCCC
Q 007088 149 SGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFANVNFTAEDFANNS 212 (618)
Q Consensus 149 ~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n~ 212 (618)
. +.+ +|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|.... ++..+++++|.
T Consensus 117 ~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~~l~-~L~~L~Ls~N~ 171 (571)
T 3cvr_A 117 E-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPELPT-SLEVLSVRNNQ 171 (571)
T ss_dssp C-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCCT-TCCEEECCSSC
T ss_pred h-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCCcCC-CcCEEECCCCC
Confidence 8 665 88999999999987 777 57888888888888887 665322 56777777775
No 330
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.46 E-value=5.8e-14 Score=143.11 Aligned_cols=129 Identities=16% Similarity=0.201 Sum_probs=83.4
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccc--cCchh-hhcCCCCCEEEeeCCCCcccCCC---C-CcCC
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGS--IPSDI-SSRLQYVTSLDLSSNSLSGEIPS---G-LANC 154 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~--ip~~~-~~~l~~L~~L~l~~N~l~g~ip~---~-~~~l 154 (618)
.+++.|+|++|++.+..|..++++++|++|+|++|++.|. +|... ...+++|++|+|++|+++ .+|. . ++++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcC
Confidence 4788888888888877778888888888888888887653 32222 123666667777777665 2332 1 3556
Q ss_pred CCCcEEEccCcccCCCCCcccccc---ccccccccccccccCCCCCCCccccccccccCCC
Q 007088 155 TFLNVLKLNNNRFTGKIPPQLGLL---NRIKTFSVASNLLTGPVPSFANVNFTAEDFANNS 212 (618)
Q Consensus 155 ~~L~~l~l~~N~l~g~~p~~l~~~---~~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n~ 212 (618)
++|++|+|++|+|++.+|+.++.+ ++|+.|+|++|+|+ .+|.....++..+++++|.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~ 283 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNR 283 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCCc
Confidence 666677777777666666666555 46666677666666 4454332355666666664
No 331
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.46 E-value=9.6e-14 Score=149.27 Aligned_cols=136 Identities=17% Similarity=0.142 Sum_probs=82.3
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhc----------------------CCCCCEEEee
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSR----------------------LQYVTSLDLS 139 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~----------------------l~~L~~L~l~ 139 (618)
.+++.|+|++|++++..+..+.++++|+.|+|++|+.-+.+|...+.+ +++|+.|+|+
T Consensus 147 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls 226 (452)
T 3zyi_A 147 SKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMS 226 (452)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCCCTTCTTCCEEECT
T ss_pred CCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccccccccccccEEECc
Confidence 478888888888886555455555555555555533333444433333 5555555555
Q ss_pred CCCCcccCCCCCcCCCCCcEEEccCcccCCCCCccccccccccccccccccccCCCCCCCc--cccccccccCCCCCCCC
Q 007088 140 SNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN--VNFTAEDFANNSGLCGK 217 (618)
Q Consensus 140 ~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~--~~~~~~~~~~n~~~c~~ 217 (618)
+|++++..|..+.++++|+.|+|++|++++..|..+..+++|+.|+|++|+|++..+.... .++..+++++|++.|.+
T Consensus 227 ~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 227 GNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp TSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECST
T ss_pred CCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCC
Confidence 5666555555566666666666666666666666666666677777777777655554322 14566777778777754
No 332
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.46 E-value=4.1e-14 Score=154.89 Aligned_cols=109 Identities=26% Similarity=0.252 Sum_probs=73.9
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCcc--ccCchhhhcCCCCCEEEeeCCCCcccCCCC-CcCCCCC
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSG--SIPSDISSRLQYVTSLDLSSNSLSGEIPSG-LANCTFL 157 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g--~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~-~~~l~~L 157 (618)
...++.|+|++|.+++.+|..++++++|+.|+|++|++++ .+|..+.. +++|++|+|++|++++.+|.. +..+++|
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~-l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L 401 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQ-MKSLQQLDISQNSVSYDEKKGDCSWTKSL 401 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTT-CTTCCEEECCSSCCBCCGGGCSCCCCTTC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhh-CCCCCEEECCCCcCCcccccchhccCccC
Confidence 4567888888888888888888888888888888888885 55666654 888888888888888767754 5556555
Q ss_pred cEEEccCcccCCCCCcccccccccccccccccccc
Q 007088 158 NVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLT 192 (618)
Q Consensus 158 ~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~ 192 (618)
+.|+|++|++++.+|..+. ++|+.|++++|+++
T Consensus 402 ~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 402 LSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK 434 (520)
T ss_dssp CEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC
T ss_pred CEEECcCCCCCcchhhhhc--ccCCEEECCCCccc
Confidence 5555555555554444332 34444444444444
No 333
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.46 E-value=5.9e-14 Score=133.05 Aligned_cols=126 Identities=13% Similarity=0.187 Sum_probs=106.0
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
.+++.|+|++|.++ .++.+..+++|++|+|++|++++..|..+.. +++|++|+|++|++++..|..++.+++|+.|+
T Consensus 66 ~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~-l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 66 HNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSG-LTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp TTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTT-CTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcC-CCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 47899999999654 4458999999999999999999888888875 99999999999999988888999999999999
Q ss_pred ccCcccCCCCCccccccccccccccccccccCCCCCCCcc-ccccccccCCC
Q 007088 162 LNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFANV-NFTAEDFANNS 212 (618)
Q Consensus 162 l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~~-~~~~~~~~~n~ 212 (618)
|++|++.+.+| .+..+++|+.|++++|++++.. .+..+ ++..+++++|+
T Consensus 143 L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 143 LSYNGAITDIM-PLKTLPELKSLNIQFDGVHDYR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp CCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCCT-TGGGCSSCCEEEECBC-
T ss_pred ccCCCCccccH-hhcCCCCCCEEECCCCCCcChH-HhccCCCCCEEEeeCcc
Confidence 99999555777 6899999999999999998843 33222 57777888885
No 334
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.46 E-value=1.9e-13 Score=140.54 Aligned_cols=144 Identities=19% Similarity=0.215 Sum_probs=119.8
Q ss_pred CCCCCcccceecCCCC--------CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEE
Q 007088 65 EGFICQFTGVDCWHPD--------ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSL 136 (618)
Q Consensus 65 ~~~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L 136 (618)
.++.|.|..+.|.+.. ...++.|+|++|++++..+..++++++|++|+|++|++++..|..+.. +++|++|
T Consensus 27 ~~c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L 105 (330)
T 1xku_A 27 FRCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAP-LVKLERL 105 (330)
T ss_dssp TTCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTT-CTTCCEE
T ss_pred CCCcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcC-CCCCCEE
Confidence 3456899999997532 347889999999999877779999999999999999999766877765 9999999
Q ss_pred EeeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCCccccccccccccccccccccC--CCCCCCc--cccccccccCCC
Q 007088 137 DLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTG--PVPSFAN--VNFTAEDFANNS 212 (618)
Q Consensus 137 ~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g--~ip~~~~--~~~~~~~~~~n~ 212 (618)
+|++|+++ .+|..+. ++|+.|++++|++++..|..+..+++|+.|++++|.++. ..|.... .++..+++++|.
T Consensus 106 ~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~ 182 (330)
T 1xku_A 106 YLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTN 182 (330)
T ss_dssp ECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSC
T ss_pred ECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCc
Confidence 99999999 7898776 799999999999998777789999999999999999964 5554322 156667777774
No 335
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.44 E-value=2.2e-13 Score=151.71 Aligned_cols=128 Identities=20% Similarity=0.230 Sum_probs=109.0
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCC-CcCCCCCcEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSG-LANCTFLNVL 160 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~-~~~l~~L~~l 160 (618)
.+++.|+|++|++++..|..|+++++|++|+|++|.+++..|..++ ++++|++|+|++|.++ .+|.. ++++++|++|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L 152 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQ-NVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTL 152 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTT-TCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHc-CCCCCCEEEeeCCCCC-CCCHHHhccCCCCCEE
Confidence 4688999999999998888999999999999999999975555454 5999999999999999 45655 6999999999
Q ss_pred EccCcccCCCCCccccccccccccccccccccCCCCCCCccccccccccCCC
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFANVNFTAEDFANNS 212 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n~ 212 (618)
+|++|+|++..|..++.+++|+.|+|++|.+++..+.... ++..+++++|.
T Consensus 153 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~-~L~~L~l~~n~ 203 (597)
T 3oja_B 153 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIP-SLFHANVSYNL 203 (597)
T ss_dssp ECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCT-TCSEEECCSSC
T ss_pred EeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhh-hhhhhhcccCc
Confidence 9999999998888999999999999999999986443333 45555666663
No 336
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.44 E-value=4.6e-14 Score=143.85 Aligned_cols=130 Identities=15% Similarity=0.083 Sum_probs=74.7
Q ss_pred CcEEEEEecCCcceeeCC----cCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCccc--CC--CCCcC
Q 007088 82 NKVLNIRLSDMGLKGQFP----RGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGE--IP--SGLAN 153 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p----~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~--ip--~~~~~ 153 (618)
.+++.|+|++|.+++.+| ..+..+++|++|+|++|++.+..|..+. .+++|++|+|++|++.|. +| ..+++
T Consensus 117 ~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 195 (310)
T 4glp_A 117 LALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVR-AFPALTSLDLSDNPGLGERGLMAALCPHK 195 (310)
T ss_dssp BCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCC-CCTTCCEEECCSCTTCHHHHHHTTSCTTS
T ss_pred CCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhc-cCCCCCEEECCCCCCccchhhhHHHhhhc
Confidence 456666666666666544 3345566667777777766644444443 366677777777766542 22 22356
Q ss_pred CCCCcEEEccCcccCCCCCc----cccccccccccccccccccCCCCCCC-cc----ccccccccCCCC
Q 007088 154 CTFLNVLKLNNNRFTGKIPP----QLGLLNRIKTFSVASNLLTGPVPSFA-NV----NFTAEDFANNSG 213 (618)
Q Consensus 154 l~~L~~l~l~~N~l~g~~p~----~l~~~~~L~~l~l~~N~l~g~ip~~~-~~----~~~~~~~~~n~~ 213 (618)
+++|++|+|++|+++ .+|. .++.+++|+.|+|++|++++.+|... .. ++..+++++|..
T Consensus 196 l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l 263 (310)
T 4glp_A 196 FPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGL 263 (310)
T ss_dssp SCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCC
T ss_pred CCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCC
Confidence 666666777777665 2332 13556666667777777666655321 11 455556666643
No 337
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.44 E-value=1.3e-13 Score=140.94 Aligned_cols=131 Identities=18% Similarity=0.170 Sum_probs=107.5
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
..++.|+|++|++++..|..++.+++|++|+|++|.+++..|..++..+++|++|+|++|++++ +|. ...+++|+.|+
T Consensus 120 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~-~~~l~~L~~L~ 197 (317)
T 3o53_A 120 QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKG-QVVFAKLKTLD 197 (317)
T ss_dssp SSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-EEC-CCCCTTCCEEE
T ss_pred CCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc-ccc-ccccccCCEEE
Confidence 4678889999999987788899999999999999999977777776568999999999999995 454 34589999999
Q ss_pred ccCcccCCCCCccccccccccccccccccccCCCCC-CCc-cccccccccCCCCCCC
Q 007088 162 LNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPS-FAN-VNFTAEDFANNSGLCG 216 (618)
Q Consensus 162 l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~-~~~-~~~~~~~~~~n~~~c~ 216 (618)
|++|++++ +|+.+..+++|+.|+|++|++++ +|. +.. .++..+++++|+..|+
T Consensus 198 Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 198 LSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp CCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHH
T ss_pred CCCCcCCc-chhhhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCc
Confidence 99999995 66668999999999999999996 453 322 2677888999987763
No 338
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.43 E-value=6.1e-14 Score=143.07 Aligned_cols=128 Identities=17% Similarity=0.196 Sum_probs=57.3
Q ss_pred cEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccc--cCchh-hhcCCCCCEEEeeCCCCcc--cCCCC-CcCCCC
Q 007088 83 KVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGS--IPSDI-SSRLQYVTSLDLSSNSLSG--EIPSG-LANCTF 156 (618)
Q Consensus 83 ~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~--ip~~~-~~~l~~L~~L~l~~N~l~g--~ip~~-~~~l~~ 156 (618)
+++.|+|++|++++..|..++++++|++|+|++|++.|. +|..+ +..+++|++|+|++|++++ .+|.. +.++++
T Consensus 150 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~ 229 (312)
T 1wwl_A 150 GLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQ 229 (312)
T ss_dssp TCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCC
T ss_pred CCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCC
Confidence 444555555555544444555555555555555555443 12222 1224455555555555541 12211 234445
Q ss_pred CcEEEccCcccCCCCC-ccccccccccccccccccccCCCCCCCccccccccccCC
Q 007088 157 LNVLKLNNNRFTGKIP-PQLGLLNRIKTFSVASNLLTGPVPSFANVNFTAEDFANN 211 (618)
Q Consensus 157 L~~l~l~~N~l~g~~p-~~l~~~~~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n 211 (618)
|+.|+|++|++++.+| ..+..+++|+.|+|++|+++ .+|.....++..+++++|
T Consensus 230 L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~~~L~~L~Ls~N 284 (312)
T 1wwl_A 230 LQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLPAKLSVLDLSYN 284 (312)
T ss_dssp CSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCCSEEEEEECCSS
T ss_pred CCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhccCCceEEECCCC
Confidence 5555555555554443 23334445555555555554 344322223444445444
No 339
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.43 E-value=1.7e-13 Score=148.32 Aligned_cols=133 Identities=22% Similarity=0.193 Sum_probs=99.0
Q ss_pred EEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEcc
Q 007088 84 VLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLN 163 (618)
Q Consensus 84 v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~ 163 (618)
++.|+|++|.+.+.+|+.+....+|+.|+|++|+++ .+|...+.++++|+.|+|++|++++..+..+.++++|+.|+|+
T Consensus 202 L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 280 (477)
T 2id5_A 202 LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLV 280 (477)
T ss_dssp CCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCC-SCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECC
T ss_pred cceeeCCCCccccccCcccccCccccEEECcCCccc-ccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECC
Confidence 444444444444444444444445666666666776 5665444568899999999999997767778999999999999
Q ss_pred CcccCCCCCccccccccccccccccccccCCCCCCCc--cccccccccCCCCCCCC
Q 007088 164 NNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN--VNFTAEDFANNSGLCGK 217 (618)
Q Consensus 164 ~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~--~~~~~~~~~~n~~~c~~ 217 (618)
+|++++..|..+..+++|+.|+|++|++++..+.... .++..+++++|++.|.+
T Consensus 281 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 281 GGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDC 336 (477)
T ss_dssp SSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSG
T ss_pred CCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCcc
Confidence 9999988888999999999999999999987665432 25778899999988864
No 340
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.43 E-value=3e-13 Score=124.99 Aligned_cols=106 Identities=25% Similarity=0.229 Sum_probs=93.2
Q ss_pred CCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCCccccccccccccccc
Q 007088 108 LTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVA 187 (618)
Q Consensus 108 L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~ 187 (618)
.+.|++++|+|. .||..+ .++|++|+|++|++++..|..++++++|+.|+|++|+|++..|..+..+++|+.|+|+
T Consensus 11 ~~~l~~s~n~l~-~ip~~~---~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGI---PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp TTEEECTTSCCS-SCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-ccCccC---CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 579999999999 799876 4789999999999998878899999999999999999997666678999999999999
Q ss_pred cccccCCCCCCC-c-cccccccccCCCCCCCC
Q 007088 188 SNLLTGPVPSFA-N-VNFTAEDFANNSGLCGK 217 (618)
Q Consensus 188 ~N~l~g~ip~~~-~-~~~~~~~~~~n~~~c~~ 217 (618)
+|+|++..|... . .++..+++++|++.|.+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 999999887533 3 26788999999998854
No 341
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.42 E-value=1.6e-13 Score=123.74 Aligned_cols=105 Identities=21% Similarity=0.222 Sum_probs=93.3
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcc-cCCCCCcCCCCCcE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSG-EIPSGLANCTFLNV 159 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g-~ip~~~~~l~~L~~ 159 (618)
..+++.|+|++|++++. ..++++++|++|+|++|.+++.+|..+.. +++|++|+|++|++++ ..|..++++++|+.
T Consensus 41 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~-l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~ 117 (149)
T 2je0_A 41 FEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEK-CPNLTHLNLSGNKIKDLSTIEPLKKLENLKS 117 (149)
T ss_dssp CTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHH-CTTCCEEECTTSCCCSHHHHGGGGGCTTCCE
T ss_pred cCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhh-CCCCCEEECCCCcCCChHHHHHHhhCCCCCE
Confidence 46799999999999976 88999999999999999999878877654 9999999999999997 24588999999999
Q ss_pred EEccCcccCCCCC---cccccccccccccccc
Q 007088 160 LKLNNNRFTGKIP---PQLGLLNRIKTFSVAS 188 (618)
Q Consensus 160 l~l~~N~l~g~~p---~~l~~~~~L~~l~l~~ 188 (618)
|++++|++++..+ ..++.+++|+.|++++
T Consensus 118 L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 118 LDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp EECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred EeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999997655 4789999999999864
No 342
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.42 E-value=2.6e-13 Score=125.03 Aligned_cols=109 Identities=23% Similarity=0.244 Sum_probs=96.8
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCC--CCCcCCCCCcE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIP--SGLANCTFLNV 159 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip--~~~~~l~~L~~ 159 (618)
.+++.|+|++|.+++. ..+..+++|++|+|++|++++.+|..+.. +++|++|+|++|++++ +| ..++.+++|+.
T Consensus 49 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~-~~~~~~l~~l~~L~~ 124 (168)
T 2ell_A 49 VNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEK-LPNLTHLNLSGNKLKD-ISTLEPLKKLECLKS 124 (168)
T ss_dssp GGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHH-CTTCCEEECBSSSCCS-SGGGGGGSSCSCCCE
T ss_pred CCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhh-CCCCCEEeccCCccCc-chhHHHHhcCCCCCE
Confidence 5799999999999976 88999999999999999999777776654 9999999999999995 44 78999999999
Q ss_pred EEccCcccCCCCC---ccccccccccccccccccccCC
Q 007088 160 LKLNNNRFTGKIP---PQLGLLNRIKTFSVASNLLTGP 194 (618)
Q Consensus 160 l~l~~N~l~g~~p---~~l~~~~~L~~l~l~~N~l~g~ 194 (618)
|+|++|++++..+ ..+..+++|+.|++++|.+...
T Consensus 125 L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 125 LDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp EECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred EEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 9999999996554 4789999999999999998654
No 343
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.41 E-value=3e-13 Score=140.38 Aligned_cols=130 Identities=21% Similarity=0.189 Sum_probs=112.8
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCC--CCcCCCCCc
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPS--GLANCTFLN 158 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~--~~~~l~~L~ 158 (618)
..+++.|+|++|++++..|..+.++++|++|+|++|+++ .+|...+.++++|++|+|++|+++ .+|. .++++++|+
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~ 152 (353)
T 2z80_A 75 CVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQ 152 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS-SCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCC
T ss_pred CCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCC-cCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCc
Confidence 467999999999999988899999999999999999999 678775556999999999999999 5776 789999999
Q ss_pred EEEccCcc-cCCCCCccccccccccccccccccccCCCCCCCc--cccccccccCCC
Q 007088 159 VLKLNNNR-FTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN--VNFTAEDFANNS 212 (618)
Q Consensus 159 ~l~l~~N~-l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~--~~~~~~~~~~n~ 212 (618)
.|++++|+ +++..|..++.+++|+.|++++|++++.+|.... .++..+++++|.
T Consensus 153 ~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 209 (353)
T 2z80_A 153 ILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQ 209 (353)
T ss_dssp EEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSC
T ss_pred EEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCc
Confidence 99999995 7766677899999999999999999999886443 156677777774
No 344
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.41 E-value=3.3e-13 Score=152.76 Aligned_cols=136 Identities=23% Similarity=0.225 Sum_probs=100.5
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccc----cCc---hhhhcCCCCCEEEeeCCCCcccCCC-CCcC
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGS----IPS---DISSRLQYVTSLDLSSNSLSGEIPS-GLAN 153 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~----ip~---~~~~~l~~L~~L~l~~N~l~g~ip~-~~~~ 153 (618)
.+++.|+|++|++++..|..+..+++|++|+|++|++++. +|. ..+.++++|++|+|++|+++ .||. .+++
T Consensus 480 ~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~ 558 (680)
T 1ziw_A 480 RNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKD 558 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC-CCCTTTTTT
T ss_pred CCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC-CCCHHHccc
Confidence 4577778888887766666677788888888888887742 111 11234788888888888888 5665 4788
Q ss_pred CCCCcEEEccCcccCCCCCccccccccccccccccccccCCCCCCCc---cccccccccCCCCCCCCC
Q 007088 154 CTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN---VNFTAEDFANNSGLCGKP 218 (618)
Q Consensus 154 l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~---~~~~~~~~~~n~~~c~~~ 218 (618)
+++|+.|+|++|++++..|..+..+++|+.|+|++|++++.+|.... .++..+++++|++.|.++
T Consensus 559 l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 559 LFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred ccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 88888888888888865555577888888888888888887775321 257788999999999765
No 345
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.41 E-value=5.2e-13 Score=123.84 Aligned_cols=106 Identities=22% Similarity=0.230 Sum_probs=91.9
Q ss_pred CCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCCccccccccccccccc
Q 007088 108 LTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVA 187 (618)
Q Consensus 108 L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~ 187 (618)
-+.+++++|++. .||..+ .++|+.|+|++|+|++..|..++++++|+.|+|++|+|++..|..+..+++|+.|+|+
T Consensus 14 ~~~l~~~~n~l~-~iP~~~---~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~ 89 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGI---PTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLN 89 (174)
T ss_dssp SSEEECCSSCCS-SCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CcEEEeCCCCCC-ccCCCc---CCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECC
Confidence 378999999997 899877 3789999999999998888899999999999999999997555567899999999999
Q ss_pred cccccCCCCC-CCcc-ccccccccCCCCCCCC
Q 007088 188 SNLLTGPVPS-FANV-NFTAEDFANNSGLCGK 217 (618)
Q Consensus 188 ~N~l~g~ip~-~~~~-~~~~~~~~~n~~~c~~ 217 (618)
+|+|++..|. +..+ ++..+++++|++.|.+
T Consensus 90 ~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 90 DNHLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred CCccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 9999987775 3332 6788899999988753
No 346
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.40 E-value=3.8e-13 Score=148.75 Aligned_cols=128 Identities=19% Similarity=0.105 Sum_probs=106.3
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
.+++.|+|++|++++..|..+.++++|++|+|++|++++..|..+.+ +++|++|+|++|+++ .||.. .+++|++|+
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLF-NQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTT-CTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCC-CCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 67899999999999888889999999999999999999666666654 999999999999999 78987 899999999
Q ss_pred ccCcccCC-CCCccccccccccccccccccccCCCCCC-CccccccccccCCCC
Q 007088 162 LNNNRFTG-KIPPQLGLLNRIKTFSVASNLLTGPVPSF-ANVNFTAEDFANNSG 213 (618)
Q Consensus 162 l~~N~l~g-~~p~~l~~~~~L~~l~l~~N~l~g~ip~~-~~~~~~~~~~~~n~~ 213 (618)
|++|++++ .+|..++++++|+.|++++|++++..... ..+++..+++++|..
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSC
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecccc
Confidence 99999997 56789999999999999999998732221 112236667777753
No 347
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.39 E-value=1.7e-13 Score=148.59 Aligned_cols=31 Identities=13% Similarity=-0.007 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHhcCCCCCccceeEEEEeCC
Q 007088 344 SEKEFLSEINTLGSVRHRNLVPLLGFCVAKK 374 (618)
Q Consensus 344 ~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 374 (618)
..++|..|++.+.+++|+|+|+++|||....
T Consensus 322 g~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~ 352 (487)
T 3oja_A 322 GSETERLECERENQARQREIDALKEQYRTVI 352 (487)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred cHHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence 4668999999999999999999999987653
No 348
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.39 E-value=1.6e-13 Score=150.11 Aligned_cols=127 Identities=20% Similarity=0.144 Sum_probs=98.8
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
.+++.|+|++|++++..|..+.++++|++|+|++|++++..|..+.. +++|++|+|++|+++ .||.. .+++|++|+
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 96 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKF-NQELEYLDLSHNKLV-KISCH--PTVNLKHLD 96 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTT-CTTCCEEECCSSCCC-EEECC--CCCCCSEEE
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhc-ccCCCEEecCCCcee-ecCcc--ccCCccEEe
Confidence 57888899998888777778888889999999999888666766654 888999999999888 68877 788889999
Q ss_pred ccCcccCC-CCCccccccccccccccccccccCCCCCCCcccc--ccccccCCCC
Q 007088 162 LNNNRFTG-KIPPQLGLLNRIKTFSVASNLLTGPVPSFANVNF--TAEDFANNSG 213 (618)
Q Consensus 162 l~~N~l~g-~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~~~~--~~~~~~~n~~ 213 (618)
|++|++++ .+|..++.+++|+.|++++|++++....... ++ ..+++++|..
T Consensus 97 L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~-~L~L~~L~l~~n~l 150 (520)
T 2z7x_B 97 LSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIA-HLNISKVLLVLGET 150 (520)
T ss_dssp CCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGGGGGGGT-TSCEEEEEEEECTT
T ss_pred ccCCccccccchhhhccCCcceEEEecCcccchhhccccc-cceeeEEEeecccc
Confidence 99998887 5788888888888888888888763221111 23 5566666643
No 349
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.39 E-value=3.1e-13 Score=148.82 Aligned_cols=118 Identities=20% Similarity=0.148 Sum_probs=105.3
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcc-cCCCCCcCCCCCcE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSG-EIPSGLANCTFLNV 159 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g-~ip~~~~~l~~L~~ 159 (618)
..+++.|+|++|++++..|..|+++++|++|+|++|++++..|..+. ++++|++|+|++|++++ .+|..++++++|+.
T Consensus 49 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~ 127 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFG-PLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQT 127 (549)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHT-TCTTCCEEECTTCCCSSSCSSCSCTTCTTCCE
T ss_pred CCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhc-cCCCCcEEECCCCcccccchhhhhhccCCccE
Confidence 46799999999999999999999999999999999999965555465 59999999999999997 57889999999999
Q ss_pred EEccCcccCCCCC-ccccccccccccccccccccCCCCCCC
Q 007088 160 LKLNNNRFTGKIP-PQLGLLNRIKTFSVASNLLTGPVPSFA 199 (618)
Q Consensus 160 l~l~~N~l~g~~p-~~l~~~~~L~~l~l~~N~l~g~ip~~~ 199 (618)
|+|++|++.+.+| ..++.+++|+.|++++|++++.+|...
T Consensus 128 L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l 168 (549)
T 2z81_A 128 LRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSL 168 (549)
T ss_dssp EEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTT
T ss_pred EECCCCccccccCHhhhhcccccCeeeccCCcccccChhhh
Confidence 9999999777776 579999999999999999999888643
No 350
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.38 E-value=4.7e-13 Score=140.89 Aligned_cols=129 Identities=14% Similarity=0.161 Sum_probs=98.8
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
..++.|+++++.++...+..+.++++|++|+|++|.+.+..|..+. .+++|++|+|++|++++..|..++++++|++|+
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFA-YAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTT-TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhcc-CCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 4677888888888743333468888999999999998854444554 488999999999999877677788899999999
Q ss_pred ccCcccCCCCCcc-ccccccccccccccccccCCCCCCCc--cccccccccCCC
Q 007088 162 LNNNRFTGKIPPQ-LGLLNRIKTFSVASNLLTGPVPSFAN--VNFTAEDFANNS 212 (618)
Q Consensus 162 l~~N~l~g~~p~~-l~~~~~L~~l~l~~N~l~g~ip~~~~--~~~~~~~~~~n~ 212 (618)
|++|+++ .+|.. ++.+++|++|++++|++++..|.... .++..+++++|.
T Consensus 124 L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 176 (390)
T 3o6n_A 124 LERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNR 176 (390)
T ss_dssp CCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSC
T ss_pred CCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCc
Confidence 9999988 45554 58888999999999999887775332 256677777774
No 351
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.38 E-value=1.1e-12 Score=138.19 Aligned_cols=128 Identities=20% Similarity=0.230 Sum_probs=108.6
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCC-CcCCCCCcEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSG-LANCTFLNVL 160 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~-~~~l~~L~~l 160 (618)
.+++.|+|++|++++..+..+.++++|++|+|++|++++..|..+. ++++|++|+|++|+++ .+|.. ++++++|++|
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L 146 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQ-NVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTL 146 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTT-TCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhc-CCCCCCEEECCCCccC-cCCHHHhcCCCCCcEE
Confidence 5789999999999988888999999999999999999965555554 5999999999999999 67766 5899999999
Q ss_pred EccCcccCCCCCccccccccccccccccccccCCCCCCCccccccccccCCC
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFANVNFTAEDFANNS 212 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n~ 212 (618)
+|++|++++..|..++.+++|+.|++++|++++....... ++..+++++|.
T Consensus 147 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~-~L~~L~l~~n~ 197 (390)
T 3o6n_A 147 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIP-SLFHANVSYNL 197 (390)
T ss_dssp ECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCT-TCSEEECCSSC
T ss_pred ECCCCccCccChhhccCCCCCCEEECCCCcCCcccccccc-ccceeeccccc
Confidence 9999999988888899999999999999999976333222 45566666663
No 352
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.38 E-value=5.4e-13 Score=147.56 Aligned_cols=117 Identities=19% Similarity=0.263 Sum_probs=109.9
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCc-cccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLS-GSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNV 159 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~-g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~ 159 (618)
..+++.|+|++|.+.+.+|..+.++++|+.|+|++|.+. |.+|..+.. +++|+.|+|++|++++..|..++++++|+.
T Consensus 420 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 498 (570)
T 2z63_A 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTE-LRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 498 (570)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT-CTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhc-ccCCCEEECCCCccccCChhhhhcccCCCE
Confidence 357899999999999999999999999999999999998 689988765 999999999999999888999999999999
Q ss_pred EEccCcccCCCCCccccccccccccccccccccCCCCCC
Q 007088 160 LKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSF 198 (618)
Q Consensus 160 l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~ 198 (618)
|+|++|++++..|..+..+++|+.|++++|.++|.+|..
T Consensus 499 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 499 LNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp EECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred EeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 999999999988888999999999999999999999864
No 353
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.37 E-value=4e-13 Score=124.85 Aligned_cols=104 Identities=18% Similarity=0.293 Sum_probs=65.6
Q ss_pred cEEEEEecCCcceeeCCcCCCCCC-CCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCC-cCCCCCcEE
Q 007088 83 KVLNIRLSDMGLKGQFPRGIERCT-SLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGL-ANCTFLNVL 160 (618)
Q Consensus 83 ~v~~l~l~~~~l~g~~p~~~~~l~-~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~-~~l~~L~~l 160 (618)
.++.|+|++|+++ .+|. +..+. +|++|+|++|.+++ + ..+.. +++|++|+|++|+++ .+|+.+ +.+++|+.|
T Consensus 20 ~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~-~-~~l~~-l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 20 RDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRK-L-DGFPL-LRRLKTLLVNNNRIC-RIGEGLDQALPDLTEL 93 (176)
T ss_dssp SCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCE-E-CCCCC-CSSCCEEECCSSCCC-EECSCHHHHCTTCCEE
T ss_pred CceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCc-c-ccccc-CCCCCEEECCCCccc-ccCcchhhcCCCCCEE
Confidence 5666777777766 3443 44444 67777777777764 3 33433 667777777777776 345443 667777777
Q ss_pred EccCcccCCCCCc--cccccccccccccccccccC
Q 007088 161 KLNNNRFTGKIPP--QLGLLNRIKTFSVASNLLTG 193 (618)
Q Consensus 161 ~l~~N~l~g~~p~--~l~~~~~L~~l~l~~N~l~g 193 (618)
+|++|+|+ .+|. .+..+++|+.|++++|.++.
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~ 127 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN 127 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC
Confidence 77777774 4555 56666777777777777663
No 354
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.37 E-value=4.8e-13 Score=130.77 Aligned_cols=128 Identities=18% Similarity=0.194 Sum_probs=106.2
Q ss_pred CCcEEEEEecCCc-ceeeCCcCCCCCCCCCeEEccC-CcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCc
Q 007088 81 ENKVLNIRLSDMG-LKGQFPRGIERCTSLTGLDLSS-NNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLN 158 (618)
Q Consensus 81 ~~~v~~l~l~~~~-l~g~~p~~~~~l~~L~~L~l~~-n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~ 158 (618)
..+++.|+|++|+ +++..+..+.++++|++|+|++ |+++ .+|...+.++++|++|+|++|++++ +|. ++.+++|+
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~-~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~ 130 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLT-YIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTD 130 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCC-EECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCC
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCee-EcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccc
Confidence 4579999999997 8766666899999999999998 9999 5666555569999999999999996 887 88888888
Q ss_pred ---EEEccCc-ccCCCCCcccccccccc-ccccccccccCCCCCC--CccccccccccCCC
Q 007088 159 ---VLKLNNN-RFTGKIPPQLGLLNRIK-TFSVASNLLTGPVPSF--ANVNFTAEDFANNS 212 (618)
Q Consensus 159 ---~l~l~~N-~l~g~~p~~l~~~~~L~-~l~l~~N~l~g~ip~~--~~~~~~~~~~~~n~ 212 (618)
.|++++| ++++..+..+..+++|+ .|++++|+++ .+|.. ...++..+++++|.
T Consensus 131 ~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~ 190 (239)
T 2xwt_C 131 IFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNK 190 (239)
T ss_dssp SEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCT
T ss_pred cccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCC
Confidence 9999999 99876666789999999 9999999998 66642 22356777888884
No 355
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.37 E-value=1.6e-12 Score=133.58 Aligned_cols=127 Identities=20% Similarity=0.240 Sum_probs=80.3
Q ss_pred CcEEEEEecCCcce--eeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcE
Q 007088 82 NKVLNIRLSDMGLK--GQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNV 159 (618)
Q Consensus 82 ~~v~~l~l~~~~l~--g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~ 159 (618)
.+++.|+|++|.+. |..+..+.++++|++|+|++|+++ .+|..+ .++|+.|+|++|++++..|..++++++|+.
T Consensus 145 ~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~---~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 220 (330)
T 1xku_A 145 NQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGL---PPSLTELHLDGNKITKVDAASLKGLNNLAK 220 (330)
T ss_dssp TTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSC---CTTCSEEECTTSCCCEECTGGGTTCTTCCE
T ss_pred ccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCccc---cccCCEEECCCCcCCccCHHHhcCCCCCCE
Confidence 46777788777774 366666777777777777777776 466544 256666666666666655666666666666
Q ss_pred EEccCcccCCCCCccccccccccccccccccccCCCCCCC-c-cccccccccCCCC
Q 007088 160 LKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFA-N-VNFTAEDFANNSG 213 (618)
Q Consensus 160 l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~-~-~~~~~~~~~~n~~ 213 (618)
|+|++|++++..|..+..+++|+.|++++|+++ .+|... . .++..+++++|..
T Consensus 221 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i 275 (330)
T 1xku_A 221 LGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNI 275 (330)
T ss_dssp EECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCC
T ss_pred EECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcC
Confidence 666666666655556666666666666666666 444322 1 1345556666543
No 356
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.36 E-value=4.9e-13 Score=124.24 Aligned_cols=107 Identities=21% Similarity=0.230 Sum_probs=95.2
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCC--CCcCCCCCcE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPS--GLANCTFLNV 159 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~--~~~~l~~L~~ 159 (618)
.+++.|+|++|++++. +.++.+++|++|+|++|+++ .+|+.++..+++|++|+|++|+++ .+|. .++.+++|+.
T Consensus 42 ~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~ 117 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTY 117 (176)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCE
T ss_pred CCCCEEECCCCCCCcc--cccccCCCCCEEECCCCccc-ccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCE
Confidence 3799999999999975 78999999999999999999 577777556999999999999996 7887 8999999999
Q ss_pred EEccCcccCCCCCcc----ccccccccccccccccccC
Q 007088 160 LKLNNNRFTGKIPPQ----LGLLNRIKTFSVASNLLTG 193 (618)
Q Consensus 160 l~l~~N~l~g~~p~~----l~~~~~L~~l~l~~N~l~g 193 (618)
|+|++|.++ .+|.. +..+++|+.|++++|.+..
T Consensus 118 L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 118 LCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp EECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred EEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 999999998 57775 8999999999999998754
No 357
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.34 E-value=2.8e-12 Score=131.81 Aligned_cols=127 Identities=16% Similarity=0.252 Sum_probs=109.1
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
..+++.|+|++|++++..|..++++++|++|+|++|++. .+|..++ ++|++|+|++|++++..+..++++++|+.|
T Consensus 77 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L 152 (332)
T 2ft3_A 77 LQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCI 152 (332)
T ss_dssp CTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEE
T ss_pred CCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEE
Confidence 467999999999999999999999999999999999999 8998764 789999999999995444568999999999
Q ss_pred EccCcccC--CCCCccccccccccccccccccccCCCCCCCccccccccccCCCC
Q 007088 161 KLNNNRFT--GKIPPQLGLLNRIKTFSVASNLLTGPVPSFANVNFTAEDFANNSG 213 (618)
Q Consensus 161 ~l~~N~l~--g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n~~ 213 (618)
+|++|+++ |..|..+..+ +|+.|++++|++++ +|.....++..+++++|..
T Consensus 153 ~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~~~L~~L~l~~n~i 205 (332)
T 2ft3_A 153 EMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLPETLNELHLDHNKI 205 (332)
T ss_dssp ECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSCSSCSCCBCCSSCC
T ss_pred ECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCccccCCCCEEECCCCcC
Confidence 99999996 4778888888 99999999999998 5543333677788888853
No 358
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.33 E-value=3e-12 Score=126.96 Aligned_cols=146 Identities=11% Similarity=0.019 Sum_probs=113.7
Q ss_pred HHHhhccCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeeEE
Q 007088 301 LMKATNSFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKKERLL 378 (618)
Q Consensus 301 l~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 378 (618)
+......|.....++.|+.+.||++... +..+++|+..... .....+.+|+++++.+. +..+.++++++.+.+..|+
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 3445567877778888888999999864 6789999986522 22345889999998884 6778899999998889999
Q ss_pred EEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC---------------------------------
Q 007088 379 VYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC--------------------------------- 425 (618)
Q Consensus 379 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--------------------------------- 425 (618)
||||++|.+|.+.+... .....++.+++++|+.||+..
T Consensus 88 v~e~i~G~~l~~~~~~~---------~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (263)
T 3tm0_A 88 LMSEADGVLCSEEYEDE---------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW 158 (263)
T ss_dssp EEECCSSEEHHHHCCTT---------TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGG
T ss_pred EEEecCCeehhhccCCc---------ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccc
Confidence 99999999988764211 123478899999999999820
Q ss_pred -----------------------CCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 426 -----------------------NPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 426 -----------------------~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
.+.++|+|++|.||+++++..+.|+||+.+.
T Consensus 159 ~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp STTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876556799998774
No 359
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.31 E-value=1.1e-14 Score=138.36 Aligned_cols=124 Identities=20% Similarity=0.272 Sum_probs=82.4
Q ss_pred cEEEEEecCCcceeeCCc------CCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCC
Q 007088 83 KVLNIRLSDMGLKGQFPR------GIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTF 156 (618)
Q Consensus 83 ~v~~l~l~~~~l~g~~p~------~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~ 156 (618)
+++.++|++++++|.+|+ .+.++++|++|+|++|++++ +| .+.. +++|++|+|++|+++ .+|..+..+++
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~-l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSG-MENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHH-HTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-cccc-CCCCCEEECCCCCcc-cccchhhcCCc
Confidence 455566666666666665 67777777777777777774 66 5544 777777777777777 67776666777
Q ss_pred CcEEEccCcccCCCCCccccccccccccccccccccCCCC--CCCcc-ccccccccCCC
Q 007088 157 LNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVP--SFANV-NFTAEDFANNS 212 (618)
Q Consensus 157 L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip--~~~~~-~~~~~~~~~n~ 212 (618)
|+.|+|++|++++ +| .++.+++|+.|++++|++++..+ .+..+ ++..+++++|+
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~ 151 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCc
Confidence 7777777777775 45 56777777777777777775322 22111 45556666664
No 360
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.31 E-value=2.4e-12 Score=127.82 Aligned_cols=123 Identities=20% Similarity=0.312 Sum_probs=91.8
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
.+++.|+|++|++++. |+ +.++++|++|+|++|++++ +|.... ++|+.|+|++|++++ +| .++++++|+.|+
T Consensus 63 ~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~N~l~~-l~~~~~---~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 63 TNLKELHLSHNQISDL-SP-LKDLTKLEELSVNRNRLKN-LNGIPS---ACLSRLFLDNNELRD-TD-SLIHLKNLEILS 134 (263)
T ss_dssp TTCCEEECCSSCCCCC-GG-GTTCSSCCEEECCSSCCSC-CTTCCC---SSCCEEECCSSCCSB-SG-GGTTCTTCCEEE
T ss_pred CCCCEEECCCCccCCC-hh-hccCCCCCEEECCCCccCC-cCcccc---CcccEEEccCCccCC-Ch-hhcCcccccEEE
Confidence 5688888888888854 33 8888888888888888884 665321 778888888888885 44 588888888888
Q ss_pred ccCcccCCCCCccccccccccccccccccccCCCCCCCcc-ccccccccCCCCCC
Q 007088 162 LNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFANV-NFTAEDFANNSGLC 215 (618)
Q Consensus 162 l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~~-~~~~~~~~~n~~~c 215 (618)
|++|++++ +| .++.+++|+.|+|++|++++. +.+..+ ++..+++++|+..+
T Consensus 135 Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 135 IRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp CTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEEC
T ss_pred CCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccC
Confidence 88888885 44 578888888888888888877 433322 56667778776544
No 361
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.31 E-value=4e-12 Score=139.49 Aligned_cols=94 Identities=29% Similarity=0.438 Sum_probs=46.3
Q ss_pred cEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEc
Q 007088 83 KVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKL 162 (618)
Q Consensus 83 ~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l 162 (618)
+++.|+|++|+|+ .|| ..+++|+.|+|++|+|++ ||. +.. +|++|+|++|+|++ ||. .+++|+.|+|
T Consensus 81 ~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~---~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 81 QITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA---SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT---TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc---CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 4555555555555 455 334555555555555553 554 321 45555555555553 444 3444555555
Q ss_pred cCcccCCCCCccccccccccccccccccccC
Q 007088 163 NNNRFTGKIPPQLGLLNRIKTFSVASNLLTG 193 (618)
Q Consensus 163 ~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g 193 (618)
++|+|++ +|. .+++|+.|+|++|+|++
T Consensus 148 s~N~l~~-lp~---~l~~L~~L~Ls~N~L~~ 174 (571)
T 3cvr_A 148 DNNQLTM-LPE---LPTSLEVLSVRNNQLTF 174 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSC
T ss_pred CCCccCc-CCC---cCCCcCEEECCCCCCCC
Confidence 5555443 443 23444444444444444
No 362
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.30 E-value=3.7e-12 Score=128.41 Aligned_cols=121 Identities=27% Similarity=0.377 Sum_probs=96.8
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
.+++.|+|++|++++..| +.++++|++|+|++|.+++ +|. +.. +++|++|+|++|++++ + +.++.+++|+.|+
T Consensus 68 ~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~-l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~ 140 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LSS-LKD-LKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 140 (291)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GGG-GTT-CTTCCEEECTTSCCCC-C-GGGGGCTTCCEEE
T ss_pred CCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Chh-hcc-CCCCCEEECCCCcCCC-C-hhhcCCCCCCEEE
Confidence 578899999999986444 8899999999999999984 554 554 8999999999999985 4 4688899999999
Q ss_pred ccCcccCCCCCccccccccccccccccccccCCCCCCCc-cccccccccCCC
Q 007088 162 LNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN-VNFTAEDFANNS 212 (618)
Q Consensus 162 l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~-~~~~~~~~~~n~ 212 (618)
|++|++++. +.++.+++|+.|++++|++++..| +.. .++..+++++|.
T Consensus 141 l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 141 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred ccCCcCCcc--hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCc
Confidence 999999864 568888999999999999988766 322 256677777774
No 363
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.28 E-value=3.8e-12 Score=131.70 Aligned_cols=106 Identities=15% Similarity=0.166 Sum_probs=93.4
Q ss_pred CeEEccCC-cCccccCchhhhcCCCCCEEEeeC-CCCcccCCCCCcCCCCCcEEEccCcccCCCCCcccccccccccccc
Q 007088 109 TGLDLSSN-NLSGSIPSDISSRLQYVTSLDLSS-NSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSV 186 (618)
Q Consensus 109 ~~L~l~~n-~l~g~ip~~~~~~l~~L~~L~l~~-N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l 186 (618)
..+++++| +|+ .||. +.. +++|+.|+|++ |+|++..|..|++|++|+.|+|++|+|+|..|..|+++++|+.|+|
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~-~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 87 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPG-AENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL 87 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCS-CSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred CEEEcCCCCCCC-ccCC-CCC-CCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeC
Confidence 45799998 999 6999 765 99999999996 9999766688999999999999999999998999999999999999
Q ss_pred ccccccCCCCCCC-ccccccccccCCCCCCCC
Q 007088 187 ASNLLTGPVPSFA-NVNFTAEDFANNSGLCGK 217 (618)
Q Consensus 187 ~~N~l~g~ip~~~-~~~~~~~~~~~n~~~c~~ 217 (618)
++|+|++..|... .+.+..+++.+|+..|.+
T Consensus 88 ~~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 88 SFNALESLSWKTVQGLSLQELVLSGNPLHCSC 119 (347)
T ss_dssp CSSCCSCCCSTTTCSCCCCEEECCSSCCCCCG
T ss_pred CCCccceeCHHHcccCCceEEEeeCCCccCCC
Confidence 9999998777544 345788899999998865
No 364
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.28 E-value=7.7e-12 Score=124.11 Aligned_cols=122 Identities=21% Similarity=0.279 Sum_probs=102.0
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
.+++.|+|++|+++ .+| .+..+++|+.|+|++|++++ +|+ +. ++++|++|+|++|++++ +|.... ++|+.|+
T Consensus 41 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~-~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~ 112 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LK-DLTKLEELSVNRNRLKN-LNGIPS--ACLSRLF 112 (263)
T ss_dssp TTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GT-TCSSCCEEECCSSCCSC-CTTCCC--SSCCEEE
T ss_pred CcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hc-cCCCCCEEECCCCccCC-cCcccc--CcccEEE
Confidence 46889999999998 566 79999999999999999995 665 55 49999999999999995 675443 9999999
Q ss_pred ccCcccCCCCCccccccccccccccccccccCCCCCCCc-cccccccccCCCCC
Q 007088 162 LNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN-VNFTAEDFANNSGL 214 (618)
Q Consensus 162 l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~-~~~~~~~~~~n~~~ 214 (618)
|++|++++ +| .++.+++|+.|+|++|++++. |.+.. .++..+++++|...
T Consensus 113 L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 113 LDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-VMLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp CCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-GGGGGCTTCCEEECTTSCCC
T ss_pred ccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-hHHccCCCCCEEECCCCcCc
Confidence 99999996 44 589999999999999999985 43332 25777888888643
No 365
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.27 E-value=4.5e-12 Score=127.81 Aligned_cols=124 Identities=22% Similarity=0.348 Sum_probs=104.2
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
..+++.|+|++|.+++ +| .+.++++|++|+|++|++++ +| .+.. +++|+.|+|++|++++ + ..++.+++|+.|
T Consensus 89 l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~~-~l~~-l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L 161 (291)
T 1h6t_A 89 LKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-IN-GLVH-LPQLESLYLGNNKITD-I-TVLSRLTKLDTL 161 (291)
T ss_dssp CTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-CG-GGGG-CTTCCEEECCSSCCCC-C-GGGGGCTTCSEE
T ss_pred CCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-Ch-hhcC-CCCCCEEEccCCcCCc-c-hhhccCCCCCEE
Confidence 4679999999999986 44 49999999999999999995 54 4654 9999999999999996 4 679999999999
Q ss_pred EccCcccCCCCCccccccccccccccccccccCCCCCCCcc-ccccccccCCCCC
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFANV-NFTAEDFANNSGL 214 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~~-~~~~~~~~~n~~~ 214 (618)
+|++|++++..| +..+++|+.|++++|.+++. |.+..+ ++..+++++|+..
T Consensus 162 ~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 162 SLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp ECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEEEEEEEEE
T ss_pred EccCCccccchh--hcCCCccCEEECCCCcCCCC-hhhccCCCCCEEECcCCccc
Confidence 999999997544 89999999999999999874 544332 5777888888643
No 366
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.27 E-value=4.8e-13 Score=136.75 Aligned_cols=126 Identities=17% Similarity=0.232 Sum_probs=105.2
Q ss_pred CcEEEEEecCCcceeeCCcCCC-CCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIE-RCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~-~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
.+++.|+|++|.+++..|..+. .+++|++|+|++|+++ .+|... . +++|+.|+|++|+++ .+|..+..+++|+.|
T Consensus 144 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~-~-l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L 219 (317)
T 3o53_A 144 SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKGQV-V-FAKLKTLDLSSNKLA-FMGPEFQSAAGVTWI 219 (317)
T ss_dssp SSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC-EEECCC-C-CTTCCEEECCSSCCC-EECGGGGGGTTCSEE
T ss_pred CCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCc-cccccc-c-cccCCEEECCCCcCC-cchhhhcccCcccEE
Confidence 5799999999999998888774 8999999999999999 456544 3 899999999999999 577789999999999
Q ss_pred EccCcccCCCCCcccccccccccccccccccc-CCCCCCCcc--ccccccccCCC
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFSVASNLLT-GPVPSFANV--NFTAEDFANNS 212 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~-g~ip~~~~~--~~~~~~~~~n~ 212 (618)
+|++|+|+ .+|..+..+++|+.|++++|.++ +.+|.+... ++..+++.+|.
T Consensus 220 ~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~ 273 (317)
T 3o53_A 220 SLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVK 273 (317)
T ss_dssp ECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred ECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCch
Confidence 99999999 58999999999999999999999 766654321 23444445443
No 367
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.27 E-value=9.5e-12 Score=126.50 Aligned_cols=121 Identities=28% Similarity=0.458 Sum_probs=75.6
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
.+++.|+|++|++++ +++ +.++++|++|+|++|++++ +| .+.. +++|+.|+|++|++++ +|. ++.+++|+.|+
T Consensus 63 ~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~-l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 135 (308)
T 1h6u_A 63 NNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKN-VS-AIAG-LQSIKTLDLTSTQITD-VTP-LAGLSNLQVLY 135 (308)
T ss_dssp TTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSC-CG-GGTT-CTTCCEEECTTSCCCC-CGG-GTTCTTCCEEE
T ss_pred CCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCC-ch-hhcC-CCCCCEEECCCCCCCC-chh-hcCCCCCCEEE
Confidence 456777777777764 333 7777777777777777763 44 3443 7777777777777764 443 66777777777
Q ss_pred ccCcccCCCCCccccccccccccccccccccCCCCCCCc-cccccccccCCC
Q 007088 162 LNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN-VNFTAEDFANNS 212 (618)
Q Consensus 162 l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~-~~~~~~~~~~n~ 212 (618)
|++|++++. |+ ++.+++|+.|++++|++++..| +.. .++..+++++|.
T Consensus 136 l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 136 LDLNQITNI-SP-LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNK 184 (308)
T ss_dssp CCSSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred CCCCccCcC-cc-ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCc
Confidence 777777643 33 6666777777777777766443 221 144555555553
No 368
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.27 E-value=6.6e-12 Score=130.13 Aligned_cols=146 Identities=14% Similarity=0.098 Sum_probs=103.5
Q ss_pred CCCcccceecCCCC--------CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCE-EE
Q 007088 67 FICQFTGVDCWHPD--------ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTS-LD 137 (618)
Q Consensus 67 ~~c~w~gv~c~~~~--------~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~-L~ 137 (618)
|-|+|..|.|++.. +..++.|+|++|+|+..-+..|.+|++|++|+|++|++.+.||...+.++++|.. ++
T Consensus 7 C~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~ 86 (350)
T 4ay9_X 7 CHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 86 (350)
T ss_dssp SEEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEE
T ss_pred cEeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhc
Confidence 44789999996532 2467889999999885444568889999999999998887888877666877764 66
Q ss_pred eeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCCccccccccccccccccc-cccCCCCC-CCcc--ccccccccCCC
Q 007088 138 LSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASN-LLTGPVPS-FANV--NFTAEDFANNS 212 (618)
Q Consensus 138 l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N-~l~g~ip~-~~~~--~~~~~~~~~n~ 212 (618)
+++|++++..|..+.++++|+.|++++|++++..+..+....++..|++.+| ++....+. +... .+..+++++|.
T Consensus 87 ~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~ 165 (350)
T 4ay9_X 87 EKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNG 165 (350)
T ss_dssp EEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSC
T ss_pred ccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccc
Confidence 7788888655677888899999999999988665556666667777877664 44433332 2221 23445666663
No 369
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.26 E-value=8.3e-12 Score=126.95 Aligned_cols=123 Identities=26% Similarity=0.391 Sum_probs=92.0
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
..+++.|+|++|.+++ + +.+.++++|++|+|++|++++ +|. +. .+++|+.|+|++|++++ +|. ++.+++|+.|
T Consensus 84 l~~L~~L~L~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~~~-l~-~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L 156 (308)
T 1h6u_A 84 LTKITELELSGNPLKN-V-SAIAGLQSIKTLDLTSTQITD-VTP-LA-GLSNLQVLYLDLNQITN-ISP-LAGLTNLQYL 156 (308)
T ss_dssp CCSCCEEECCSCCCSC-C-GGGTTCTTCCEEECTTSCCCC-CGG-GT-TCTTCCEEECCSSCCCC-CGG-GGGCTTCCEE
T ss_pred CCCCCEEEccCCcCCC-c-hhhcCCCCCCEEECCCCCCCC-chh-hc-CCCCCCEEECCCCccCc-Ccc-ccCCCCccEE
Confidence 3578888888888875 3 368888888888888888884 554 54 48888888888888885 443 7888888888
Q ss_pred EccCcccCCCCCccccccccccccccccccccCCCCCCCc-cccccccccCCCC
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFAN-VNFTAEDFANNSG 213 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~-~~~~~~~~~~n~~ 213 (618)
+|++|++++ +|. +..+++|+.|++++|++++..| +.. .++..+++++|..
T Consensus 157 ~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~l 207 (308)
T 1h6u_A 157 SIGNAQVSD-LTP-LANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQI 207 (308)
T ss_dssp ECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSCC
T ss_pred EccCCcCCC-Chh-hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCcc
Confidence 888888885 444 7888888888888888887655 222 2566677777754
No 370
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.26 E-value=8e-12 Score=138.49 Aligned_cols=106 Identities=28% Similarity=0.399 Sum_probs=55.3
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
.+++.|+|++|+|++..| +.+|++|+.|+|++|.|++ +| .+.. +++|+.|+|++|++++ + +.+++|++|+.|+
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~-l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~ 137 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKD-LKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 137 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTT-CTTCCEEECTTSCCCC-C-GGGGGCTTCSEEE
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhcc-CCCCCEEEecCCCCCC-C-ccccCCCccCEEE
Confidence 345556666666554332 5555555555555555552 33 3332 5555555555555553 2 2355555555555
Q ss_pred ccCcccCCCCCccccccccccccccccccccCCCC
Q 007088 162 LNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVP 196 (618)
Q Consensus 162 l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip 196 (618)
|++|+|++. +.++.+++|+.|+|++|+|++.+|
T Consensus 138 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 138 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp CCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 555555542 345555555555555555555444
No 371
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.25 E-value=5.7e-12 Score=138.77 Aligned_cols=101 Identities=23% Similarity=0.297 Sum_probs=89.4
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccC-CCCCcCCCCCcEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEI-PSGLANCTFLNVL 160 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~i-p~~~~~l~~L~~l 160 (618)
.+++.|+|++|+|+ .+|..|++|++|+.|+|++|+|++ || .++. |++|+.|+|++|+|++.+ |..+++|++|+.|
T Consensus 463 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~-l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L 538 (567)
T 1dce_A 463 LLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVAN-LPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL 538 (567)
T ss_dssp TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTT-CSSCCEEECCSSCCCSSSTTGGGGGCTTCCEE
T ss_pred ccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCC-CCCCcEEECCCCCCCCCCCcHHHhcCCCCCEE
Confidence 57999999999999 999999999999999999999996 88 6765 999999999999999876 9999999999999
Q ss_pred EccCcccCCCCCcc---cccccccccccc
Q 007088 161 KLNNNRFTGKIPPQ---LGLLNRIKTFSV 186 (618)
Q Consensus 161 ~l~~N~l~g~~p~~---l~~~~~L~~l~l 186 (618)
+|++|+|++.+|.. +..+++|+.|++
T Consensus 539 ~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 539 NLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp ECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred EecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 99999999765532 234778888754
No 372
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.25 E-value=8.3e-12 Score=138.34 Aligned_cols=123 Identities=20% Similarity=0.324 Sum_probs=103.1
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
..+++.|+|++|.|++ +| .+..|++|+.|+|++|+|++ +| .+.. |++|+.|+|++|++++. ..++.|++|+.|
T Consensus 86 l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~-~l~~-l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L 158 (605)
T 1m9s_A 86 LKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-IN-GLVH-LPQLESLYLGNNKITDI--TVLSRLTKLDTL 158 (605)
T ss_dssp CTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-CG-GGGG-CTTCSEEECCSSCCCCC--GGGGSCTTCSEE
T ss_pred CCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-Cc-cccC-CCccCEEECCCCccCCc--hhhcccCCCCEE
Confidence 3578999999999986 44 79999999999999999995 55 4554 99999999999999964 678999999999
Q ss_pred EccCcccCCCCCccccccccccccccccccccCCCCCCCcc-ccccccccCCCC
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFANV-NFTAEDFANNSG 213 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~~-~~~~~~~~~n~~ 213 (618)
+|++|+|++..| +..+++|+.|+|++|+|++. |.+..+ ++..+++++|+.
T Consensus 159 ~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l 209 (605)
T 1m9s_A 159 SLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQEC 209 (605)
T ss_dssp ECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEE
T ss_pred ECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcC
Confidence 999999997666 88999999999999999985 544332 577788888864
No 373
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.24 E-value=2e-11 Score=131.00 Aligned_cols=117 Identities=21% Similarity=0.340 Sum_probs=78.7
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
.+++.|+|++|++++ +| +++++++|++|+|++|++++ +|.. ..+|++|+|++|++++ +| .++++++|+.|+
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~----~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~ 201 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDL----PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIY 201 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCC----cccccEEECcCCcCCc-Cc-cccCCCCCCEEE
Confidence 467777777777775 66 57777888888888887774 6653 3467777777777775 66 577777777777
Q ss_pred ccCcccCCCCCccccccccccccccccccccCCCCCCCcc-ccccccccCCC
Q 007088 162 LNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFANV-NFTAEDFANNS 212 (618)
Q Consensus 162 l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~~-~~~~~~~~~n~ 212 (618)
+++|++++ +|... ++|+.|++++|+++ .+|.+..+ ++..+++++|.
T Consensus 202 l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N~ 248 (454)
T 1jl5_A 202 ADNNSLKK-LPDLP---LSLESIVAGNNILE-ELPELQNLPFLTTIYADNNL 248 (454)
T ss_dssp CCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSSC
T ss_pred CCCCcCCc-CCCCc---CcccEEECcCCcCC-cccccCCCCCCCEEECCCCc
Confidence 77777775 44432 36666667777666 55653332 45556666664
No 374
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.24 E-value=2.8e-11 Score=129.97 Aligned_cols=99 Identities=25% Similarity=0.327 Sum_probs=52.4
Q ss_pred cEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEc
Q 007088 83 KVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKL 162 (618)
Q Consensus 83 ~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l 162 (618)
+++.|+|++|+++| +| .++.+++|++|+|++|++++ +| ++. +++|++|+|++|++++ +| ++++++|++|+|
T Consensus 43 ~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~-l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 43 TLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQ-NTNLTYLACDSNKLTN-LD--VTPLTKLTYLNC 113 (457)
T ss_dssp TCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTT-CTTCSEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred CCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--ccc-CCCCCEEECcCCCCce-ee--cCCCCcCCEEEC
Confidence 45555555555554 23 45555555555555555553 33 332 5555555555555554 23 555555555555
Q ss_pred cCcccCCCCCccccccccccccccccccccC
Q 007088 163 NNNRFTGKIPPQLGLLNRIKTFSVASNLLTG 193 (618)
Q Consensus 163 ~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g 193 (618)
++|++++ +| ++.+++|+.|++++|++++
T Consensus 114 ~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~ 141 (457)
T 3bz5_A 114 DTNKLTK-LD--VSQNPLLTYLNCARNTLTE 141 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCCEEECTTSCCSC
T ss_pred CCCcCCe-ec--CCCCCcCCEEECCCCccce
Confidence 5555554 33 4555555555555555555
No 375
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.23 E-value=8.2e-12 Score=123.32 Aligned_cols=131 Identities=12% Similarity=0.075 Sum_probs=99.1
Q ss_pred EEe-ecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCC--ccceeEEEEeCCeeEEEEeecCCCccc
Q 007088 313 IIG-TGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRN--LVPLLGFCVAKKERLLVYSYLENGTLY 389 (618)
Q Consensus 313 ~lG-~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lV~e~~~~gsL~ 389 (618)
.++ .|..+.||++...+|..+++|+.... ....+.+|+++++.+.+.+ +.+++++....+..++||||++|.+|.
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~ 103 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 103 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence 344 45569999998877888999997654 2245778999988885444 566889888888889999999998884
Q ss_pred cccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC--------------------------------------------
Q 007088 390 DKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC-------------------------------------------- 425 (618)
Q Consensus 390 ~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------------------------------------------- 425 (618)
... .+ ...++.++++.|+.||+..
T Consensus 104 --~~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
T 1nd4_A 104 --SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELF 171 (264)
T ss_dssp --TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHH
T ss_pred --cCc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHH
Confidence 211 11 2357788888899998752
Q ss_pred -----------CCCceecCCCCCCeeeCCCCceEEcccCcccc
Q 007088 426 -----------NPRIIHRNISSKCILLDGDFEPKLSDFGLARL 457 (618)
Q Consensus 426 -----------~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 457 (618)
.+.++|+|++|.||+++++..+.|+||+.+..
T Consensus 172 ~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 172 ARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11299999999999998776677999998753
No 376
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.22 E-value=1.1e-11 Score=128.03 Aligned_cols=124 Identities=25% Similarity=0.357 Sum_probs=76.8
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
.+++.|+|++|++++. |+ +..+++|++|+|++|.+++ +| .+. .+++|+.|+|++|++++ +| .+..+++|+.|+
T Consensus 221 ~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~~-~~~-~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~ 293 (347)
T 4fmz_A 221 TRLNSLKIGNNKITDL-SP-LANLSQLTWLEIGTNQISD-IN-AVK-DLTKLKMLNVGSNQISD-IS-VLNNLSQLNSLF 293 (347)
T ss_dssp TTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CG-GGT-TCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEE
T ss_pred CcCCEEEccCCccCCC-cc-hhcCCCCCEEECCCCccCC-Ch-hHh-cCCCcCEEEccCCccCC-Ch-hhcCCCCCCEEE
Confidence 3566666666666643 22 6666777777777776663 43 233 36677777777777764 33 466677777777
Q ss_pred ccCcccCCCCCccccccccccccccccccccCCCCCCCccccccccccCCC
Q 007088 162 LNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFANVNFTAEDFANNS 212 (618)
Q Consensus 162 l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n~ 212 (618)
|++|++++..|..++.+++|+.|++++|++++..|-..-.++..+++++|+
T Consensus 294 L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 294 LNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQV 344 (347)
T ss_dssp CCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC-
T ss_pred CcCCcCCCcChhHhhccccCCEEEccCCccccccChhhhhccceeehhhhc
Confidence 777777766666667777777777777777766661111145556666664
No 377
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.22 E-value=6.3e-14 Score=132.95 Aligned_cols=110 Identities=20% Similarity=0.251 Sum_probs=98.6
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
.+++.|+|++|++++ +| .+.++++|+.|+|++|+++ .+|..+.. +++|+.|+|++|++++ +| .++++++|+.|+
T Consensus 48 ~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~-~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~ 121 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAV-ADTLEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp TTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH-HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEE
T ss_pred CCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhc-CCcCCEEECcCCcCCc-CC-ccccCCCCCEEE
Confidence 578999999999997 78 8999999999999999999 89987764 8999999999999996 67 689999999999
Q ss_pred ccCcccCCCCC-ccccccccccccccccccccCCCCC
Q 007088 162 LNNNRFTGKIP-PQLGLLNRIKTFSVASNLLTGPVPS 197 (618)
Q Consensus 162 l~~N~l~g~~p-~~l~~~~~L~~l~l~~N~l~g~ip~ 197 (618)
|++|++++.-+ ..+..+++|+.|++++|.+++.+|.
T Consensus 122 l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 122 MSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp ESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 99999995322 4789999999999999999998775
No 378
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.20 E-value=3.3e-11 Score=129.42 Aligned_cols=105 Identities=21% Similarity=0.248 Sum_probs=86.4
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
..+++.|+|++|+..|.+ .++.+++|+.|+|++|++++ +| +. .+++|+.|+|++|++++. .++.+++|+.|
T Consensus 147 l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~-~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L 217 (457)
T 3bz5_A 147 NTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VS-QNKLLNRLNCDTNNITKL---DLNQNIQLTFL 217 (457)
T ss_dssp CTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CT-TCTTCCEEECCSSCCSCC---CCTTCTTCSEE
T ss_pred CCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cc-cCCCCCEEECcCCcCCee---ccccCCCCCEE
Confidence 356888999998777777 47888999999999999985 77 44 488899999999998863 48888899999
Q ss_pred EccCcccCCCCCccccccccccccccccccccCCCCC
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPS 197 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~ 197 (618)
+|++|+|++ +| ++.+++|+.|++++|+++|..+.
T Consensus 218 ~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~ 251 (457)
T 3bz5_A 218 DCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVS 251 (457)
T ss_dssp ECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCT
T ss_pred ECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHH
Confidence 999999987 66 78888899999999999886653
No 379
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.20 E-value=6.9e-12 Score=139.27 Aligned_cols=134 Identities=22% Similarity=0.310 Sum_probs=97.1
Q ss_pred CccCCCCCCCCCCcccceecCCC-----CCCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCC
Q 007088 57 SWNFNNNTEGFICQFTGVDCWHP-----DENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQ 131 (618)
Q Consensus 57 ~W~~~~~~~~~~c~w~gv~c~~~-----~~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~ 131 (618)
.|..+ ..||.|+|..|.-. ....++.|++++|+|+ .+|..+. ++|+.|+|++|+|+ .||. .++
T Consensus 14 ~W~~~----~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~----~l~ 81 (622)
T 3g06_A 14 AWRRA----APAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA----LPP 81 (622)
T ss_dssp HHHHT----CCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC----CCT
T ss_pred HHHhc----CCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC----cCC
Confidence 67643 34788876432100 1235788999999988 8888776 78999999999888 6886 278
Q ss_pred CCCEEEeeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCCccccccccccccccccccccCCCCCCCccccccccccCC
Q 007088 132 YVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFANVNFTAEDFANN 211 (618)
Q Consensus 132 ~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n 211 (618)
+|++|+|++|+|+ .||. .+++|+.|+|++|+|++ +|. .+++|+.|++++|++++ +|.... ++..+++++|
T Consensus 82 ~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~l~-~L~~L~Ls~N 151 (622)
T 3g06_A 82 ELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVLPP-GLQELSVSDN 151 (622)
T ss_dssp TCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCCCT-TCCEEECCSS
T ss_pred CCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCCCC-CCCEEECcCC
Confidence 8889999999888 5776 67888888888888885 555 45677888888888876 444332 5666777776
Q ss_pred C
Q 007088 212 S 212 (618)
Q Consensus 212 ~ 212 (618)
.
T Consensus 152 ~ 152 (622)
T 3g06_A 152 Q 152 (622)
T ss_dssp C
T ss_pred c
Confidence 4
No 380
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.19 E-value=2e-11 Score=130.94 Aligned_cols=59 Identities=25% Similarity=0.361 Sum_probs=37.2
Q ss_pred CCCCEEEeeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCCccccccccccccccccccccC--CCCC
Q 007088 131 QYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTG--PVPS 197 (618)
Q Consensus 131 ~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g--~ip~ 197 (618)
++|+.|+|++|++++ +|.. +++|+.|+|++|+++ .+|. .+++|+.|++++|+++| .+|.
T Consensus 317 ~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~ 377 (454)
T 1jl5_A 317 PSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPE 377 (454)
T ss_dssp TTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCT
T ss_pred CcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChH
Confidence 456666666666664 5554 356666677777666 3555 35666667777777666 5554
No 381
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.18 E-value=2.7e-11 Score=130.56 Aligned_cols=104 Identities=24% Similarity=0.378 Sum_probs=58.2
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVLK 161 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~ 161 (618)
.+++.|+|++|.+++..| +..+++|+.|+|++|.+++ +|+ +. .+++|+.|+|++|++++..| ++.+++|+.|+
T Consensus 243 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~-~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 315 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN-ISP-LA-GLTALTNLELNENQLEDISP--ISNLKNLTYLT 315 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCC-CGG-GT-TCTTCSEEECCSSCCSCCGG--GGGCTTCSEEE
T ss_pred CCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCc-ccc-cc-CCCccCeEEcCCCcccCchh--hcCCCCCCEEE
Confidence 356666666666665433 5566666666666666663 333 33 25666666666666654322 55556666666
Q ss_pred ccCcccCCCCCccccccccccccccccccccCC
Q 007088 162 LNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGP 194 (618)
Q Consensus 162 l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ 194 (618)
|++|++++..| ++.+++|+.|++++|++++.
T Consensus 316 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 316 LYFNNISDISP--VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred CcCCcCCCchh--hccCccCCEeECCCCccCCc
Confidence 66666655433 44555555555555555553
No 382
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.16 E-value=5e-11 Score=128.50 Aligned_cols=125 Identities=27% Similarity=0.316 Sum_probs=101.1
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
..+++.|+|++|++++. +.+..+++|+.|+|++|.+++..| +. .+++|+.|+|++|++++. |. ++.+++|+.|
T Consensus 220 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~-~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L 292 (466)
T 1o6v_A 220 LTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LS-GLTKLTELKLGANQISNI-SP-LAGLTALTNL 292 (466)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GT-TCTTCSEEECCSSCCCCC-GG-GTTCTTCSEE
T ss_pred cCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hh-cCCCCCEEECCCCccCcc-cc-ccCCCccCeE
Confidence 35789999999999863 468899999999999999996544 54 499999999999999964 44 8899999999
Q ss_pred EccCcccCCCCCccccccccccccccccccccCCCCCCCccccccccccCCCCC
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPSFANVNFTAEDFANNSGL 214 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~~~~~~~~~~~~~~n~~~ 214 (618)
+|++|++++..| ++.+++|+.|++++|++++..|-..-.++..+++++|...
T Consensus 293 ~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~ 344 (466)
T 1o6v_A 293 ELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVS 344 (466)
T ss_dssp ECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCC
T ss_pred EcCCCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccC
Confidence 999999997544 7889999999999999999877222225677788888543
No 383
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.11 E-value=2.9e-10 Score=118.10 Aligned_cols=141 Identities=15% Similarity=0.216 Sum_probs=107.4
Q ss_pred CCcEEeecCCeeEEEEEeCCCcEEEEEEec--cCc--cCHHHHHHHHHHHhcCC--CCCccceeEEEEeC---CeeEEEE
Q 007088 310 KNNIIGTGRTGATYIAMLPGGCFIMIKRLE--DSQ--HSEKEFLSEINTLGSVR--HRNLVPLLGFCVAK---KERLLVY 380 (618)
Q Consensus 310 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~--~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lV~ 380 (618)
..+.|+.|.++.||+....+ ..+++|+.. ... .....+.+|..+++.+. +..+++++.++.+. +..|+||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 35678999999999998755 577888876 332 23456888999999886 45688899988776 4589999
Q ss_pred eecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------------
Q 007088 381 SYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC----------------------------------- 425 (618)
Q Consensus 381 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----------------------------------- 425 (618)
||++|.++.+... ..++...+..++.++++.|+.||+..
T Consensus 121 e~v~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 121 EFVSGRVLWDQSL------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp ECCCCBCCCCTTC------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred EecCCeecCCCcc------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 9999987754221 23678888999999999999999831
Q ss_pred --------------------CCCceecCCCCCCeeeCCCCc--eEEcccCcccc
Q 007088 426 --------------------NPRIIHRNISSKCILLDGDFE--PKLSDFGLARL 457 (618)
Q Consensus 426 --------------------~~~ivH~Dlkp~NIll~~~~~--~kl~DfG~a~~ 457 (618)
.+.++|+|+++.||+++.++. +.|+||+.+..
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 246999999999999997753 68999998875
No 384
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.10 E-value=8.1e-11 Score=121.53 Aligned_cols=105 Identities=23% Similarity=0.304 Sum_probs=91.8
Q ss_pred CCcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 81 ENKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
..+++.|+|++|.+++. +.+..+++|++|+|++|++++ +|. +. .+++|+.|+|++|++++..|..++++++|+.|
T Consensus 242 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~~~-~~-~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 316 (347)
T 4fmz_A 242 LSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISD-ISV-LN-NLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTL 316 (347)
T ss_dssp CTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCC-CGG-GG-GCTTCSEEECCSSCCCGGGHHHHHTCTTCSEE
T ss_pred CCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCC-Chh-hc-CCCCCCEEECcCCcCCCcChhHhhccccCCEE
Confidence 46799999999999863 569999999999999999995 553 54 49999999999999999888889999999999
Q ss_pred EccCcccCCCCCcccccccccccccccccccc
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFSVASNLLT 192 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~ 192 (618)
+|++|++++..| +..+++|+.|++++|.++
T Consensus 317 ~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 317 FLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp ECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EccCCccccccC--hhhhhccceeehhhhccc
Confidence 999999997666 889999999999999986
No 385
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.09 E-value=8.5e-12 Score=131.06 Aligned_cols=131 Identities=15% Similarity=0.183 Sum_probs=109.4
Q ss_pred CcEEEEEecCCcce-eeCC---cCCCCCCCCCeEEccCCcCc--c---ccCchhhhcCCCCCEEEeeCCCCc----ccCC
Q 007088 82 NKVLNIRLSDMGLK-GQFP---RGIERCTSLTGLDLSSNNLS--G---SIPSDISSRLQYVTSLDLSSNSLS----GEIP 148 (618)
Q Consensus 82 ~~v~~l~l~~~~l~-g~~p---~~~~~l~~L~~L~l~~n~l~--g---~ip~~~~~~l~~L~~L~l~~N~l~----g~ip 148 (618)
.+++.|+|++|+++ +.+| ..+.++++|+.|+|++|+++ | .+|..+.. +++|++|+|++|.++ +.+|
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~-~~~L~~L~Ls~n~l~~~g~~~l~ 237 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAY-CQELKVLDLQDNTFTHLGSSALA 237 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGG-CTTCCEEECCSSCCHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhc-CCCccEEECcCCCCCcHHHHHHH
Confidence 68999999999998 5666 56888999999999999998 4 34545654 999999999999997 7899
Q ss_pred CCCcCCCCCcEEEccCcccCCC----CCccc--cccccccccccccccccC----CCCCCC-c--cccccccccCCCC
Q 007088 149 SGLANCTFLNVLKLNNNRFTGK----IPPQL--GLLNRIKTFSVASNLLTG----PVPSFA-N--VNFTAEDFANNSG 213 (618)
Q Consensus 149 ~~~~~l~~L~~l~l~~N~l~g~----~p~~l--~~~~~L~~l~l~~N~l~g----~ip~~~-~--~~~~~~~~~~n~~ 213 (618)
..+..+++|+.|+|++|+|++. +|..+ +.+++|+.|+|++|.+++ .+|... . .++..+++++|+.
T Consensus 238 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l 315 (386)
T 2ca6_A 238 IALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRF 315 (386)
T ss_dssp HHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBS
T ss_pred HHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcC
Confidence 9999999999999999999976 67777 448999999999999999 577533 1 2677788888864
No 386
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.09 E-value=6.5e-12 Score=129.12 Aligned_cols=107 Identities=21% Similarity=0.324 Sum_probs=69.2
Q ss_pred CcEEEEEecCCcceee-CCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCC-CCccc-CCCCCcCCCCCc
Q 007088 82 NKVLNIRLSDMGLKGQ-FPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSN-SLSGE-IPSGLANCTFLN 158 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~-~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N-~l~g~-ip~~~~~l~~L~ 158 (618)
.+++.|+|++|.+++. +|..+.++++|++|+|++|.+++.+|..+.. +++|++|+|++| .+++. +|..+.++++|+
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~-~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAK-NSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTT-CTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhc-CCCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 4566777777776655 6666666777777777777766666666654 666777777766 56642 555566666666
Q ss_pred EEEccCc-ccCCC-CCccccccc-cccccccccc
Q 007088 159 VLKLNNN-RFTGK-IPPQLGLLN-RIKTFSVASN 189 (618)
Q Consensus 159 ~l~l~~N-~l~g~-~p~~l~~~~-~L~~l~l~~N 189 (618)
.|+|++| ++++. +|..+..++ +|+.|++++|
T Consensus 172 ~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 172 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCC
Confidence 6666666 66653 455566666 6666666666
No 387
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.07 E-value=4.7e-12 Score=133.02 Aligned_cols=131 Identities=21% Similarity=0.352 Sum_probs=108.1
Q ss_pred CcEEEEEecCCccee----eCCcCCCCC---------CCCCeEEccCCcCc-cccC---chhhhcCCCCCEEEeeCCCCc
Q 007088 82 NKVLNIRLSDMGLKG----QFPRGIERC---------TSLTGLDLSSNNLS-GSIP---SDISSRLQYVTSLDLSSNSLS 144 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g----~~p~~~~~l---------~~L~~L~l~~n~l~-g~ip---~~~~~~l~~L~~L~l~~N~l~ 144 (618)
.+++.|+|++|++++ .++..+..+ ++|++|+|++|+++ +.+| ..+. .+++|++|+|++|+++
T Consensus 122 ~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~-~~~~L~~L~L~~n~l~ 200 (386)
T 2ca6_A 122 TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQ-SHRLLHTVKMVQNGIR 200 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHH-HCTTCCEEECCSSCCC
T ss_pred CCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHH-hCCCcCEEECcCCCCC
Confidence 579999999999963 466777777 89999999999998 6677 3454 4999999999999998
Q ss_pred --c---cCCCCCcCCCCCcEEEccCcccC----CCCCccccccccccccccccccccCC----CCCCC----cccccccc
Q 007088 145 --G---EIPSGLANCTFLNVLKLNNNRFT----GKIPPQLGLLNRIKTFSVASNLLTGP----VPSFA----NVNFTAED 207 (618)
Q Consensus 145 --g---~ip~~~~~l~~L~~l~l~~N~l~----g~~p~~l~~~~~L~~l~l~~N~l~g~----ip~~~----~~~~~~~~ 207 (618)
| .+|..+..+++|+.|+|++|+|+ +.+|..+..+++|+.|+|++|.+++. +|... ..++..++
T Consensus 201 ~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~ 280 (386)
T 2ca6_A 201 PEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLR 280 (386)
T ss_dssp HHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEE
T ss_pred HhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEE
Confidence 4 46668999999999999999997 77899999999999999999999876 44321 22567778
Q ss_pred ccCCCC
Q 007088 208 FANNSG 213 (618)
Q Consensus 208 ~~~n~~ 213 (618)
+++|..
T Consensus 281 L~~n~i 286 (386)
T 2ca6_A 281 LQYNEI 286 (386)
T ss_dssp CCSSCC
T ss_pred CcCCcC
Confidence 888853
No 388
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.06 E-value=1.4e-10 Score=128.79 Aligned_cols=62 Identities=24% Similarity=0.254 Sum_probs=28.7
Q ss_pred CCCCCEEEeeCCCCcccCCCCCcCCCCCcEEEccCcccCCCCCccccccccccccccccccccCCCC
Q 007088 130 LQYVTSLDLSSNSLSGEIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVP 196 (618)
Q Consensus 130 l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip 196 (618)
+++|+.|+|++|+|+ .||. .+++|+.|+|++|+|+ .+|..++++++|+.|+|++|.++|.+|
T Consensus 240 l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~ 301 (622)
T 3g06_A 240 PSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTL 301 (622)
T ss_dssp CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHH
T ss_pred CCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCH
Confidence 344444444444444 3443 3344444444444444 444444444445555555554444444
No 389
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.04 E-value=2.5e-11 Score=124.70 Aligned_cols=128 Identities=18% Similarity=0.153 Sum_probs=96.1
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccc-cCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCCCCcEE
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGS-IPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCTFLNVL 160 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~-ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~L~~l 160 (618)
.+++.|+|++|.+.+.++. +.++++|++|+|++|.+++. +|..+.. +++|++|+|++|++++.+|..++++++|+.|
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~-~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L 147 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQ-CSKLQNLSLEGLRLSDPIVNTLAKNSNLVRL 147 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTT-BCCCSEEECTTCBCCHHHHHHHTTCTTCSEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhh-CCCCCEEeCcCcccCHHHHHHHhcCCCCCEE
Confidence 4677788888888876555 66788888888888888765 7766654 8888888888888888888888888888888
Q ss_pred EccCc-ccCCC-CCccccccccccccccccc-cccCC-CCCCCc--c-ccccccccCC
Q 007088 161 KLNNN-RFTGK-IPPQLGLLNRIKTFSVASN-LLTGP-VPSFAN--V-NFTAEDFANN 211 (618)
Q Consensus 161 ~l~~N-~l~g~-~p~~l~~~~~L~~l~l~~N-~l~g~-ip~~~~--~-~~~~~~~~~n 211 (618)
+|++| .+++. +|..+..+++|+.|++++| .+++. +|.... . ++..+++++|
T Consensus 148 ~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 148 NLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp ECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred ECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCC
Confidence 88888 67763 6777788888888888888 88764 332211 1 3555666666
No 390
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.02 E-value=3.7e-10 Score=116.90 Aligned_cols=108 Identities=12% Similarity=0.093 Sum_probs=93.9
Q ss_pred EEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCC-CCcCCCCCcE-EEcc
Q 007088 86 NIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPS-GLANCTFLNV-LKLN 163 (618)
Q Consensus 86 ~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~-~~~~l~~L~~-l~l~ 163 (618)
.++-++++|+ .||..+ .++|++|+|++|+|+ .||+..+.+|++|++|+|++|++.+.||. .|.+|++|.. ++++
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 4678899999 789877 478999999999999 79987666799999999999999888886 4688988765 7778
Q ss_pred CcccCCCCCccccccccccccccccccccCCCCC
Q 007088 164 NNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVPS 197 (618)
Q Consensus 164 ~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip~ 197 (618)
+|++++..|..+..+++|++|++++|++++..+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~ 122 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDV 122 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCC
T ss_pred CCcccccCchhhhhccccccccccccccccCCch
Confidence 8999987788899999999999999999987664
No 391
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.01 E-value=3.8e-11 Score=125.00 Aligned_cols=130 Identities=25% Similarity=0.243 Sum_probs=88.5
Q ss_pred CcEEEEEecCCcceeeCC----cCCCCCC-CCCeEEccCCcCccccCchhhhcC-----CCCCEEEeeCCCCcccCCCCC
Q 007088 82 NKVLNIRLSDMGLKGQFP----RGIERCT-SLTGLDLSSNNLSGSIPSDISSRL-----QYVTSLDLSSNSLSGEIPSGL 151 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p----~~~~~l~-~L~~L~l~~n~l~g~ip~~~~~~l-----~~L~~L~l~~N~l~g~ip~~~ 151 (618)
..++.|+|++|++++..+ ..+.+++ +|++|+|++|++++..+..+.. + ++|++|+|++|++++..+..+
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~-~l~~~~~~L~~L~Ls~n~l~~~~~~~l 100 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQ-ILAAIPANVTSLNLSGNFLSYKSSDEL 100 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHH-HHHTSCTTCCEEECCSSCGGGSCHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHH-HHhccCCCccEEECcCCcCChHHHHHH
Confidence 357888888888876555 5667777 7888888888888666665554 4 778888888888886655544
Q ss_pred c----CC-CCCcEEEccCcccCCCCCccccc-----cccccccccccccccCCCCCCC-------ccccccccccCCC
Q 007088 152 A----NC-TFLNVLKLNNNRFTGKIPPQLGL-----LNRIKTFSVASNLLTGPVPSFA-------NVNFTAEDFANNS 212 (618)
Q Consensus 152 ~----~l-~~L~~l~l~~N~l~g~~p~~l~~-----~~~L~~l~l~~N~l~g~ip~~~-------~~~~~~~~~~~n~ 212 (618)
+ .+ ++|+.|+|++|+|++..+..++. .++|+.|+|++|.+++..+... ..++..+++++|.
T Consensus 101 ~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~ 178 (362)
T 3goz_A 101 VKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNN 178 (362)
T ss_dssp HHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSC
T ss_pred HHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCC
Confidence 3 33 78888888888887666555443 2578888888888875333110 0146666777764
No 392
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.00 E-value=6.2e-11 Score=123.36 Aligned_cols=130 Identities=22% Similarity=0.235 Sum_probs=95.0
Q ss_pred cEEEEEecCCcceeeCCcCCCCC-----CCCCeEEccCCcCccccCchhhhc---C-CCCCEEEeeCCCCcccCCCCC--
Q 007088 83 KVLNIRLSDMGLKGQFPRGIERC-----TSLTGLDLSSNNLSGSIPSDISSR---L-QYVTSLDLSSNSLSGEIPSGL-- 151 (618)
Q Consensus 83 ~v~~l~l~~~~l~g~~p~~~~~l-----~~L~~L~l~~n~l~g~ip~~~~~~---l-~~L~~L~l~~N~l~g~ip~~~-- 151 (618)
+++.|+|++|++++..+..+..+ ++|++|+|++|.+++..+..++.. + ++|++|+|++|++++..+..+
T Consensus 52 ~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 131 (362)
T 3goz_A 52 SVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQ 131 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred ceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHH
Confidence 78899999999988777777665 889999999999987666655431 3 789999999999986554443
Q ss_pred --cC-CCCCcEEEccCcccCCCCC----ccccccc-cccccccccccccCCCCCCCc-------cccccccccCCC
Q 007088 152 --AN-CTFLNVLKLNNNRFTGKIP----PQLGLLN-RIKTFSVASNLLTGPVPSFAN-------VNFTAEDFANNS 212 (618)
Q Consensus 152 --~~-l~~L~~l~l~~N~l~g~~p----~~l~~~~-~L~~l~l~~N~l~g~ip~~~~-------~~~~~~~~~~n~ 212 (618)
.. .++|+.|+|++|++++.-+ ..+..++ +|+.|+|++|++++..+.... .++..+++++|.
T Consensus 132 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 207 (362)
T 3goz_A 132 AFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANL 207 (362)
T ss_dssp HHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSC
T ss_pred HHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCC
Confidence 33 3689999999999986443 3344554 899999999999877652110 156667777774
No 393
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.88 E-value=3.9e-10 Score=114.24 Aligned_cols=188 Identities=20% Similarity=0.209 Sum_probs=122.8
Q ss_pred CcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCC-CCC--ccceeEEEEeCC---eeEEEEeecC
Q 007088 311 NNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR-HRN--LVPLLGFCVAKK---ERLLVYSYLE 384 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lV~e~~~ 384 (618)
.+.++.|....||+.. ..+++|+.... .....+.+|.++++.+. +.. +.+++......+ ..|+|||+++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 4679999999999863 45888886533 33467889999998873 333 345554443333 3479999999
Q ss_pred CCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC---------------------------------------
Q 007088 385 NGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC--------------------------------------- 425 (618)
Q Consensus 385 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--------------------------------------- 425 (618)
|.++.+... ..++..++..++.++++.++.||+..
T Consensus 100 G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 100 GVPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp CEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred CeECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 988865322 23677888889999999999999621
Q ss_pred ----------------CCCceecCCCCCCeeeCC--CCceEEcccCcccccCCCCCcccccccC--CCC---------cc
Q 007088 426 ----------------NPRIIHRNISSKCILLDG--DFEPKLSDFGLARLMNPVDTHLSTFVNG--EFG---------DL 476 (618)
Q Consensus 426 ----------------~~~ivH~Dlkp~NIll~~--~~~~kl~DfG~a~~~~~~~~~~~~~~~~--~~g---------t~ 476 (618)
.+.++|+|++|.||++++ ...+.|+||+.+..-.... ........ ..+ .+
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~-Dl~~~~~~~~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDN-DFISLMEDDEEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTH-HHHTTCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHH-HHHHHHhhccccCHHHHHHHHHHc
Confidence 135899999999999998 4567899999887543211 00000000 000 00
Q ss_pred cccC-CCCCCCCCCCCccchHHHHHHHHHHHhCCCCC
Q 007088 477 GYVA-PEYPRTLVATPKGDVYSFGVVLLELITGERPT 512 (618)
Q Consensus 477 ~y~a-PE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf 512 (618)
++.. |+... ......+.|++|.++|.+.+|+.+|
T Consensus 253 ~~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 253 KHKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp TCSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1111 11111 0112368999999999999998775
No 394
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.88 E-value=1.2e-10 Score=114.57 Aligned_cols=126 Identities=17% Similarity=0.222 Sum_probs=87.4
Q ss_pred CCcccceecCCCCCCcEEEEEecC---CcceeeCCcC------------------------CCCCCCCCe--EEccCCcC
Q 007088 68 ICQFTGVDCWHPDENKVLNIRLSD---MGLKGQFPRG------------------------IERCTSLTG--LDLSSNNL 118 (618)
Q Consensus 68 ~c~w~gv~c~~~~~~~v~~l~l~~---~~l~g~~p~~------------------------~~~l~~L~~--L~l~~n~l 118 (618)
.|.|.|+.|+. ...+|..+...+ ..+.|.++++ +.....|.. ++++.|+.
T Consensus 77 l~~~~g~i~~~-~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~ 155 (267)
T 3rw6_A 77 LKAVNYKILDR-ENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRR 155 (267)
T ss_dssp HHHTTSSCBCT-TSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSH
T ss_pred HHhcCcEEECC-CCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCCHH
Confidence 58899999964 334666665544 3444444421 222223333 56667743
Q ss_pred ccccCch---hhhcCCCCCEEEeeCCCCcc--cCCCCCcCCCCCcEEEccCcccCCCCCccccccc--cccccccccccc
Q 007088 119 SGSIPSD---ISSRLQYVTSLDLSSNSLSG--EIPSGLANCTFLNVLKLNNNRFTGKIPPQLGLLN--RIKTFSVASNLL 191 (618)
Q Consensus 119 ~g~ip~~---~~~~l~~L~~L~l~~N~l~g--~ip~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~--~L~~l~l~~N~l 191 (618)
. .++.. +..++++|+.|+|++|+|++ .+|..++.+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+
T Consensus 156 ~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl 232 (267)
T 3rw6_A 156 S-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSL 232 (267)
T ss_dssp H-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTT
T ss_pred H-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcC
Confidence 3 33321 22358999999999999998 6777788999999999999999975 4455555 899999999999
Q ss_pred cCCCCC
Q 007088 192 TGPVPS 197 (618)
Q Consensus 192 ~g~ip~ 197 (618)
++.+|.
T Consensus 233 ~~~~~~ 238 (267)
T 3rw6_A 233 CDTFRD 238 (267)
T ss_dssp GGGCSS
T ss_pred ccccCc
Confidence 998773
No 395
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.79 E-value=9.4e-11 Score=125.93 Aligned_cols=112 Identities=16% Similarity=0.155 Sum_probs=62.7
Q ss_pred CcEEEEEecCCcceeeC-----CcCCCCCCCCCeEEccCCcCccc----cCchhhhcCCCCCEEEeeCCCCcccCCCCCc
Q 007088 82 NKVLNIRLSDMGLKGQF-----PRGIERCTSLTGLDLSSNNLSGS----IPSDISSRLQYVTSLDLSSNSLSGEIPSGLA 152 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~-----p~~~~~l~~L~~L~l~~n~l~g~----ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~ 152 (618)
.+++.|+|++|.+++.- +..+..+++|++|+|++|++++. +|..+.. +++|++|+|++|.+++..+..+.
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~-~~~L~~L~Ls~n~i~~~~~~~l~ 305 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRA-KESLKELSLAGNELGDEGARLLC 305 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHH-CTTCCEEECTTCCCHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhh-CCCcceEECCCCCCchHHHHHHH
Confidence 45666777777665431 12223466666666666666643 5555443 66666666666666543332222
Q ss_pred C-----CCCCcEEEccCcccCCC----CCccccccccccccccccccccCC
Q 007088 153 N-----CTFLNVLKLNNNRFTGK----IPPQLGLLNRIKTFSVASNLLTGP 194 (618)
Q Consensus 153 ~-----l~~L~~l~l~~N~l~g~----~p~~l~~~~~L~~l~l~~N~l~g~ 194 (618)
. .++|+.|+|++|++++. +|..+..+++|+.|++++|.+++.
T Consensus 306 ~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~ 356 (461)
T 1z7x_W 306 ETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 356 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHH
T ss_pred HHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccc
Confidence 2 24666666666666644 344555556666666666666554
No 396
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.74 E-value=4e-10 Score=120.96 Aligned_cols=133 Identities=20% Similarity=0.192 Sum_probs=100.8
Q ss_pred CCcEEEEEecCCcceee----CCcCCCCCCCCCeEEccCCcCccccCchhhh----cCCCCCEEEeeCCCCccc----CC
Q 007088 81 ENKVLNIRLSDMGLKGQ----FPRGIERCTSLTGLDLSSNNLSGSIPSDISS----RLQYVTSLDLSSNSLSGE----IP 148 (618)
Q Consensus 81 ~~~v~~l~l~~~~l~g~----~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~----~l~~L~~L~l~~N~l~g~----ip 148 (618)
..+++.|+|++|++++. ++..+.++++|++|+|++|.+++.-+..+.. ..++|+.|+|++|.+++. +|
T Consensus 255 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 334 (461)
T 1z7x_W 255 SSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334 (461)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHH
Confidence 35789999999999865 7777888999999999999997654444443 236899999999998865 56
Q ss_pred CCCcCCCCCcEEEccCcccCCCCCccccc-----cccccccccccccccC----CCCCCCc--cccccccccCCCC
Q 007088 149 SGLANCTFLNVLKLNNNRFTGKIPPQLGL-----LNRIKTFSVASNLLTG----PVPSFAN--VNFTAEDFANNSG 213 (618)
Q Consensus 149 ~~~~~l~~L~~l~l~~N~l~g~~p~~l~~-----~~~L~~l~l~~N~l~g----~ip~~~~--~~~~~~~~~~n~~ 213 (618)
..+..+++|+.|+|++|++++..+..+.. .++|+.|++++|++++ .+|.... .++..+++++|..
T Consensus 335 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i 410 (461)
T 1z7x_W 335 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCL 410 (461)
T ss_dssp HHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSC
T ss_pred HHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCC
Confidence 67778889999999999888765555543 5689999999998886 5664321 2566778888753
No 397
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.69 E-value=2.9e-09 Score=104.66 Aligned_cols=80 Identities=24% Similarity=0.276 Sum_probs=66.6
Q ss_pred CCCCCCCeEEccCCcCcc--ccCchhhhcCCCCCEEEeeCCCCcccCCCCCcCCC--CCcEEEccCcccCCCCCc-----
Q 007088 103 ERCTSLTGLDLSSNNLSG--SIPSDISSRLQYVTSLDLSSNSLSGEIPSGLANCT--FLNVLKLNNNRFTGKIPP----- 173 (618)
Q Consensus 103 ~~l~~L~~L~l~~n~l~g--~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~--~L~~l~l~~N~l~g~~p~----- 173 (618)
.++++|+.|+|++|+|++ .+|..+.. +++|+.|+|++|+|++. .++..++ +|+.|+|++|.+++.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~-l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~ 243 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQK-APNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYI 243 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHH-STTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhh-CCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHH
Confidence 568899999999999997 66666654 99999999999999964 4556665 999999999999998873
Q ss_pred --cccccccccccc
Q 007088 174 --QLGLLNRIKTFS 185 (618)
Q Consensus 174 --~l~~~~~L~~l~ 185 (618)
.+..+++|+.||
T Consensus 244 ~~il~~~P~L~~LD 257 (267)
T 3rw6_A 244 SAIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHHCTTCCEES
T ss_pred HHHHHHCcccCeEC
Confidence 356788888776
No 398
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.69 E-value=8.5e-08 Score=97.69 Aligned_cols=137 Identities=12% Similarity=0.148 Sum_probs=102.9
Q ss_pred cCCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCC----CCccceeEEEEeCCeeEEEEee
Q 007088 307 SFSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRH----RNLVPLLGFCVAKKERLLVYSY 382 (618)
Q Consensus 307 ~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~lV~e~ 382 (618)
.....+.++.|....||+. +..+++|+.... .....+.+|.+++..+.+ ..+.+++++ +..++||||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~-~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~ 108 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD-SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKY 108 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH-HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEEC
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH-HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEee
Confidence 5566788999999999998 566888876442 223468899998888865 234555554 567899999
Q ss_pred cCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCC------------------------------------
Q 007088 383 LENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCN------------------------------------ 426 (618)
Q Consensus 383 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~------------------------------------ 426 (618)
++|.++.+... ..++..++..++.++++.++.||+...
T Consensus 109 i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (320)
T 3r70_A 109 IKGERITYEQY------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLT 182 (320)
T ss_dssp CCCBCCCHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cCCcccccccc------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccc
Confidence 99988864321 236777788889999999999996422
Q ss_pred ------------------------CCceecCCCCCCeeeCCCCceEEcccCccccc
Q 007088 427 ------------------------PRIIHRNISSKCILLDGDFEPKLSDFGLARLM 458 (618)
Q Consensus 427 ------------------------~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 458 (618)
+.++|+|++|.||+++.+..+.|+||+.+..-
T Consensus 183 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 183 DEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred ccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23499999999999998766799999988653
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.61 E-value=3.9e-09 Score=109.89 Aligned_cols=131 Identities=21% Similarity=0.184 Sum_probs=86.8
Q ss_pred CcEEEEEecCCcceeeCCcCCC-CCCCCCeEEccCCcCccccCchhhh----cCCCCCEEEeeCCCCcc----cCCCCCc
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIE-RCTSLTGLDLSSNNLSGSIPSDISS----RLQYVTSLDLSSNSLSG----EIPSGLA 152 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~-~l~~L~~L~l~~n~l~g~ip~~~~~----~l~~L~~L~l~~N~l~g----~ip~~~~ 152 (618)
..++.|+|++|+++..-...+. .+++|+.|+|++|+|+..-...+.. ..++|+.|+|++|.++. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 4788899998888653333332 3567888888888887433333322 24678888888888864 2444456
Q ss_pred CCCCCcEEEccCcccCCC----CCccccccccccccccccccccCCC----CCCC--ccccccccccCCC
Q 007088 153 NCTFLNVLKLNNNRFTGK----IPPQLGLLNRIKTFSVASNLLTGPV----PSFA--NVNFTAEDFANNS 212 (618)
Q Consensus 153 ~l~~L~~l~l~~N~l~g~----~p~~l~~~~~L~~l~l~~N~l~g~i----p~~~--~~~~~~~~~~~n~ 212 (618)
.+++|++|+|++|+|+.. ++..+...++|+.|+|++|.++..- +... ..++..+++++|.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~ 250 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNE 250 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSS
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCC
Confidence 778888888888888742 3555667778888888888887531 1111 1145667777774
No 400
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.46 E-value=8.1e-07 Score=89.77 Aligned_cols=136 Identities=18% Similarity=0.159 Sum_probs=96.8
Q ss_pred CcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCC---CccceeEEEE-eCCeeEEEEeecCCC
Q 007088 311 NNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHR---NLVPLLGFCV-AKKERLLVYSYLENG 386 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lV~e~~~~g 386 (618)
.+.++.|....||+. |..+++|+-.. ......+.+|.+++..+.+. .+.+++.+.. ..+..++||||++|.
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 456888888899988 46678887432 23346788999999998642 3567777764 345678999999998
Q ss_pred ccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------------------
Q 007088 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC----------------------------------------- 425 (618)
Q Consensus 387 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----------------------------------------- 425 (618)
++.+... ..++......++.++++.|+.||+..
T Consensus 99 ~l~~~~~------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l 172 (306)
T 3tdw_A 99 ILGEDGM------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL 172 (306)
T ss_dssp ECHHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred ECchhhh------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence 8765321 12455566666777777777766531
Q ss_pred ----------------CCCceecCCCCCCeeeCC---CCc-eEEcccCcccc
Q 007088 426 ----------------NPRIIHRNISSKCILLDG---DFE-PKLSDFGLARL 457 (618)
Q Consensus 426 ----------------~~~ivH~Dlkp~NIll~~---~~~-~kl~DfG~a~~ 457 (618)
.+.++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 224699999999999987 455 48999998764
No 401
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.46 E-value=6.7e-07 Score=89.44 Aligned_cols=75 Identities=17% Similarity=0.205 Sum_probs=60.5
Q ss_pred CcEEeecCCeeEEEEEeCCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCCC---CccceeEEEEeCCeeEEEEeecCCC
Q 007088 311 NNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRHR---NLVPLLGFCVAKKERLLVYSYLENG 386 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lV~e~~~~g 386 (618)
.+.|+.|.++.||++...+|..+++|+..... .....+..|++.|+.+++. .+++++++. ..++||||++++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~ 95 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccC
Confidence 56799999999999998899999999975432 2345789999999999765 577887763 468999999998
Q ss_pred ccc
Q 007088 387 TLY 389 (618)
Q Consensus 387 sL~ 389 (618)
++.
T Consensus 96 ~~~ 98 (288)
T 3d1u_A 96 PPT 98 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 753
No 402
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.43 E-value=1.5e-08 Score=112.38 Aligned_cols=130 Identities=5% Similarity=-0.021 Sum_probs=87.3
Q ss_pred CcEEEEEecCCcceeeCCcCCCC-CCCCCeEEcc----CCcCccc-----cCchhhhcCCCCCEEEeeCC--CCcccCCC
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIER-CTSLTGLDLS----SNNLSGS-----IPSDISSRLQYVTSLDLSSN--SLSGEIPS 149 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~-l~~L~~L~l~----~n~l~g~-----ip~~~~~~l~~L~~L~l~~N--~l~g~ip~ 149 (618)
.+++.|+|+.+++++..+..++. +++|+.|+|+ .|++++. ++..+. ++++|+.|+|+++ .+++..+.
T Consensus 378 ~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~-~~~~L~~L~L~~~~~~l~~~~~~ 456 (592)
T 3ogk_B 378 QELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLI-GCKKLRRFAFYLRQGGLTDLGLS 456 (592)
T ss_dssp TTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHH-HCTTCCEEEEECCGGGCCHHHHH
T ss_pred ccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHH-hCCCCCEEEEecCCCCccHHHHH
Confidence 46778888888888777777765 7888888885 6777752 443343 3788888888743 36665555
Q ss_pred CCcC-CCCCcEEEccCcccCC-CCCccccccccccccccccccccCC-CCCCCc--cccccccccCCC
Q 007088 150 GLAN-CTFLNVLKLNNNRFTG-KIPPQLGLLNRIKTFSVASNLLTGP-VPSFAN--VNFTAEDFANNS 212 (618)
Q Consensus 150 ~~~~-l~~L~~l~l~~N~l~g-~~p~~l~~~~~L~~l~l~~N~l~g~-ip~~~~--~~~~~~~~~~n~ 212 (618)
.++. +++|+.|+|++|++++ .+|..+..+++|+.|+|++|.+++. ++.... .++..+++++|.
T Consensus 457 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 457 YIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp HHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred HHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 5543 7778888888888876 3455556778888888888887654 222211 145666777775
No 403
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.41 E-value=7e-07 Score=88.35 Aligned_cols=135 Identities=17% Similarity=0.137 Sum_probs=98.3
Q ss_pred EEeecCCe-eEEEEEe-CCCcEEEEEEeccCccCHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeeEEEEeecCCCccc
Q 007088 313 IIGTGRTG-ATYIAML-PGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKKERLLVYSYLENGTLY 389 (618)
Q Consensus 313 ~lG~G~~g-~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~~gsL~ 389 (618)
.+..|..+ .||+... .++..+++|+-... ....+.+|...|+.+. +--+.++++++.+.+..++|||+++|.++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~ 108 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF 108 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence 45566665 6898875 45678899986543 3456788999888774 334778899999999999999999998776
Q ss_pred cccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCC--------------------------------------------
Q 007088 390 DKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNC-------------------------------------------- 425 (618)
Q Consensus 390 ~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------------------------------------------- 425 (618)
+..... ......+..+++..|+.||+..
T Consensus 109 ~~~~~~--------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (272)
T 4gkh_A 109 QVLEEY--------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW 180 (272)
T ss_dssp HHHHHC--------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred ccccCC--------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence 643221 1223456677777777777531
Q ss_pred -----------CCCceecCCCCCCeeeCCCCceEEcccCcccc
Q 007088 426 -----------NPRIIHRNISSKCILLDGDFEPKLSDFGLARL 457 (618)
Q Consensus 426 -----------~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 457 (618)
.+.++|+|+.+.||++++++.+-|+||+.+..
T Consensus 181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 01379999999999999877777999998753
No 404
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.41 E-value=1.4e-06 Score=90.16 Aligned_cols=77 Identities=10% Similarity=0.057 Sum_probs=58.7
Q ss_pred CCCCcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCC--ccceeEEEEeC-CeeEEEEeecC
Q 007088 308 FSKNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRN--LVPLLGFCVAK-KERLLVYSYLE 384 (618)
Q Consensus 308 y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~~~lV~e~~~ 384 (618)
....+.++.|....+|+... ++..+++|+.... ..+..|..++..+.... +.+++.++... +..|+||||++
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~ 117 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQ 117 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCC
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecC
Confidence 33456789999999999886 5788899987543 25888998888886433 56778777665 56899999999
Q ss_pred CCccc
Q 007088 385 NGTLY 389 (618)
Q Consensus 385 ~gsL~ 389 (618)
|.++.
T Consensus 118 G~~l~ 122 (362)
T 3ovc_A 118 GVTLQ 122 (362)
T ss_dssp SEETT
T ss_pred CCCcc
Confidence 87664
No 405
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.39 E-value=5.9e-09 Score=108.54 Aligned_cols=131 Identities=18% Similarity=0.141 Sum_probs=95.5
Q ss_pred CcEEEEEecCCcceeeCCcCCC-----CCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCC-----
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIE-----RCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGL----- 151 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~-----~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~----- 151 (618)
..++.|+|++|+++..-...+. +.++|+.|+|++|.++..-...+...+++|+.|+|++|+++..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 4688999999998864333332 237999999999999865445555558899999999999985433333
Q ss_pred cCCCCCcEEEccCcccCC----CCCccccccccccccccccccccCCC----CCCC--ccccccccccCCC
Q 007088 152 ANCTFLNVLKLNNNRFTG----KIPPQLGLLNRIKTFSVASNLLTGPV----PSFA--NVNFTAEDFANNS 212 (618)
Q Consensus 152 ~~l~~L~~l~l~~N~l~g----~~p~~l~~~~~L~~l~l~~N~l~g~i----p~~~--~~~~~~~~~~~n~ 212 (618)
...++|+.|+|++|+|+. .++..+..+++|++|+|++|.++..- +... ..++..+++++|.
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~ 222 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNG 222 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSC
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCC
Confidence 346889999999999974 34556677899999999999997531 1111 0146677777774
No 406
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.33 E-value=5.8e-08 Score=90.51 Aligned_cols=110 Identities=14% Similarity=0.192 Sum_probs=83.6
Q ss_pred CcEEEEEecCC-ccee----eCCcCCCCCCCCCeEEccCCcCccc----cCchhhhcCCCCCEEEeeCCCCccc----CC
Q 007088 82 NKVLNIRLSDM-GLKG----QFPRGIERCTSLTGLDLSSNNLSGS----IPSDISSRLQYVTSLDLSSNSLSGE----IP 148 (618)
Q Consensus 82 ~~v~~l~l~~~-~l~g----~~p~~~~~l~~L~~L~l~~n~l~g~----ip~~~~~~l~~L~~L~l~~N~l~g~----ip 148 (618)
..++.|+|++| ++.. .+...+...++|++|+|++|.+... +...+.. .++|++|+|++|.++.. +.
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~-n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKV-NNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHH-CSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHh-CCCcCEEECcCCcCCHHHHHHHH
Confidence 57889999998 8763 2455677788999999999999632 3333433 67899999999999853 45
Q ss_pred CCCcCCCCCcEEEc--cCcccCCC----CCcccccccccccccccccccc
Q 007088 149 SGLANCTFLNVLKL--NNNRFTGK----IPPQLGLLNRIKTFSVASNLLT 192 (618)
Q Consensus 149 ~~~~~l~~L~~l~l--~~N~l~g~----~p~~l~~~~~L~~l~l~~N~l~ 192 (618)
..+...+.|+.|+| ++|.|+.. +...+...++|+.|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 56778889999999 88998854 3344555688999999998874
No 407
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.26 E-value=1.3e-06 Score=90.13 Aligned_cols=80 Identities=10% Similarity=0.021 Sum_probs=57.3
Q ss_pred cEE-eecCCeeEEEEEeC-------CCcEEEEEEeccCc---c-CHHHHHHHHHHHhcCC-C--CCccceeEEEEeC---
Q 007088 312 NII-GTGRTGATYIAMLP-------GGCFIMIKRLEDSQ---H-SEKEFLSEINTLGSVR-H--RNLVPLLGFCVAK--- 373 (618)
Q Consensus 312 ~~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~-~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~--- 373 (618)
+.| +.|....+|+.... ++..+++|+..... . ....+.+|+.+++.+. + -.+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 467 78888999998764 26788899875432 1 1245778888888874 2 3577888887665
Q ss_pred CeeEEEEeecCCCccccc
Q 007088 374 KERLLVYSYLENGTLYDK 391 (618)
Q Consensus 374 ~~~~lV~e~~~~gsL~~~ 391 (618)
+..++||||++|.++.+.
T Consensus 106 g~~~~v~e~l~G~~l~~~ 123 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPDV 123 (357)
T ss_dssp SSCEEEEECCCCBCCCBT
T ss_pred CCceEEEEecCCCChhhc
Confidence 356899999998877653
No 408
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.26 E-value=1.3e-06 Score=89.18 Aligned_cols=99 Identities=16% Similarity=0.175 Sum_probs=49.8
Q ss_pred cEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCC-EEEeeCCCCcccCC-CCCcCCCCCcEE
Q 007088 83 KVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVT-SLDLSSNSLSGEIP-SGLANCTFLNVL 160 (618)
Q Consensus 83 ~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~-~L~l~~N~l~g~ip-~~~~~l~~L~~l 160 (618)
+++.|+|++|+++..-+..|.+|++|+.|+|.+| +. .|+...|.++++|+ .|+|++ +++ .|+ ..|.+|++|+.|
T Consensus 227 ~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~-~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 227 NLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVT-AIEFGAFMGCDNLRYV 302 (329)
T ss_dssp TCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCC-EECTTTTTTCTTEEEE
T ss_pred CCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cce-EEchhhhhCCccCCEE
Confidence 4555555555555333334555555555555555 44 45555554455555 555555 444 232 345555555555
Q ss_pred EccCcccCCCCCccccccccccccc
Q 007088 161 KLNNNRFTGKIPPQLGLLNRIKTFS 185 (618)
Q Consensus 161 ~l~~N~l~g~~p~~l~~~~~L~~l~ 185 (618)
+|++|+++..-+..|.++++|+.++
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EeCCCccCccchhhhcCCcchhhhc
Confidence 5555555533333455555555443
No 409
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.10 E-value=7.4e-06 Score=83.52 Aligned_cols=80 Identities=20% Similarity=0.242 Sum_probs=54.3
Q ss_pred CCCCCEEEeeCCCCcccCCC-CCcCCCCCcEEEccCcccCCCCCcccccccccc-ccccccccccCCCCC-CCcc-cccc
Q 007088 130 LQYVTSLDLSSNSLSGEIPS-GLANCTFLNVLKLNNNRFTGKIPPQLGLLNRIK-TFSVASNLLTGPVPS-FANV-NFTA 205 (618)
Q Consensus 130 l~~L~~L~l~~N~l~g~ip~-~~~~l~~L~~l~l~~N~l~g~~p~~l~~~~~L~-~l~l~~N~l~g~ip~-~~~~-~~~~ 205 (618)
+++|+.|+|++|+++ .||. .|.+|++|+.|+|.+| ++..-+.+|.++++|+ .+++.+ +++..-+. |..+ ++..
T Consensus 225 ~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~ 301 (329)
T 3sb4_A 225 MPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRY 301 (329)
T ss_dssp CTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEE
T ss_pred cCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCE
Confidence 678888888888888 6665 4788888888888887 6643345678888888 888877 44433222 2222 4555
Q ss_pred ccccCCC
Q 007088 206 EDFANNS 212 (618)
Q Consensus 206 ~~~~~n~ 212 (618)
+++.+|.
T Consensus 302 l~l~~n~ 308 (329)
T 3sb4_A 302 VLATGDK 308 (329)
T ss_dssp EEECSSC
T ss_pred EEeCCCc
Confidence 6665553
No 410
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.10 E-value=1.6e-06 Score=95.96 Aligned_cols=105 Identities=8% Similarity=0.048 Sum_probs=65.9
Q ss_pred CcEEEEEecCCcceee----CCcCCCCCCCCCeEEccCCcCc----cccCchhhhcCCCCCEEEeeCCCCcccCCCCCcC
Q 007088 82 NKVLNIRLSDMGLKGQ----FPRGIERCTSLTGLDLSSNNLS----GSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLAN 153 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~----~p~~~~~l~~L~~L~l~~n~l~----g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~~ 153 (618)
.+++.|+|++|.+++. ++..+.++++|++|+|++|.++ +.++..+. ++++|+.|+|++|.+.+ +|..+++
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~-~~~~L~~L~L~~~~~~~-l~~~~~~ 241 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIAR-NCRSLVSVKVGDFEILE-LVGFFKA 241 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHH-HCTTCCEEECSSCBGGG-GHHHHHH
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHh-hCCCCcEEeccCccHHH-HHHHHhh
Confidence 4677888888877655 4444566778888888888776 34444443 37788888888887774 6666666
Q ss_pred CCCCcEEEccCcccC---CCCCcccccccccccccccc
Q 007088 154 CTFLNVLKLNNNRFT---GKIPPQLGLLNRIKTFSVAS 188 (618)
Q Consensus 154 l~~L~~l~l~~N~l~---g~~p~~l~~~~~L~~l~l~~ 188 (618)
+++|+.|+++++... +..+..+..+++|+.|++++
T Consensus 242 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~ 279 (592)
T 3ogk_B 242 AANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSY 279 (592)
T ss_dssp CTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETT
T ss_pred hhHHHhhcccccccccchHHHHHHhhccccccccCccc
Confidence 666776666643222 22333445555555555554
No 411
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.05 E-value=2.7e-07 Score=102.08 Aligned_cols=129 Identities=9% Similarity=0.028 Sum_probs=93.6
Q ss_pred CcEEEEEecCCcceeeCCcCCC-CCCCCCeEEcc--C----CcCcc-----ccCchhhhcCCCCCEEEeeCCCCcccCCC
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIE-RCTSLTGLDLS--S----NNLSG-----SIPSDISSRLQYVTSLDLSSNSLSGEIPS 149 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~-~l~~L~~L~l~--~----n~l~g-----~ip~~~~~~l~~L~~L~l~~N~l~g~ip~ 149 (618)
.+++.|.+..+++++..+..+. ++++|+.|+|+ + |++++ .++.-+ ..+++|+.|+|++ ++++..+.
T Consensus 372 ~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~-~~~~~L~~L~L~~-~l~~~~~~ 449 (594)
T 2p1m_B 372 PKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIV-EHCKDLRRLSLSG-LLTDKVFE 449 (594)
T ss_dssp TTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHH-HHCTTCCEEECCS-SCCHHHHH
T ss_pred hhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHH-hhCCCccEEeecC-cccHHHHH
Confidence 4678888888999887766665 58999999999 4 56662 122223 3489999999977 77766666
Q ss_pred CCcC-CCCCcEEEccCcccCCCCCccc-cccccccccccccccccCCCCC-CCc--cccccccccCCC
Q 007088 150 GLAN-CTFLNVLKLNNNRFTGKIPPQL-GLLNRIKTFSVASNLLTGPVPS-FAN--VNFTAEDFANNS 212 (618)
Q Consensus 150 ~~~~-l~~L~~l~l~~N~l~g~~p~~l-~~~~~L~~l~l~~N~l~g~ip~-~~~--~~~~~~~~~~n~ 212 (618)
.++. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++..+. ... .++..+++++|+
T Consensus 450 ~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~ 517 (594)
T 2p1m_B 450 YIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCS 517 (594)
T ss_dssp HHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSC
T ss_pred HHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCC
Confidence 6665 8899999999999987666555 6689999999999998654432 111 156667777764
No 412
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.02 E-value=1.9e-05 Score=80.62 Aligned_cols=141 Identities=16% Similarity=0.214 Sum_probs=80.3
Q ss_pred cEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCC--CCCccceeE------EEEeCCeeEEEEeec
Q 007088 312 NIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR--HRNLVPLLG------FCVAKKERLLVYSYL 383 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~------~~~~~~~~~lV~e~~ 383 (618)
+.|+.|..+.||+....+|. +++|+.... ..++..|..++..+. .-.+.+++. +....+..++||||+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~~-~vlk~~~~~---~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSGA-VCLKRIHRP---EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp EECC----CEEEEEEETTEE-EEEEEECSC---HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eeccccccCcEEEEEeCCCC-EEEEecCCC---HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 34555678899999886665 889988763 234445555555442 112333332 123456789999999
Q ss_pred CCCcccc--------------ccCC----CC-C-C----CcCCCHHHH-------------------------------H
Q 007088 384 ENGTLYD--------------KLHP----AE-H-E----VMHMDWPLR-------------------------------L 408 (618)
Q Consensus 384 ~~gsL~~--------------~l~~----~~-~-~----~~~l~~~~~-------------------------------~ 408 (618)
+|.++.. .++. .. . . ...-.|... .
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 9866531 0110 00 0 0 001123211 0
Q ss_pred HHHHHHHHHHHHHHh----------CCCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 409 RIAIGSARGLAWLHH----------NCNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 409 ~i~~~i~~~L~~LH~----------~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
.+..++..++.+|+. ...+.++|+|+++.||+++.++.+.|+||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111223446667763 023489999999999999888889999999774
No 413
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.95 E-value=6.1e-05 Score=75.88 Aligned_cols=139 Identities=17% Similarity=0.167 Sum_probs=92.6
Q ss_pred CcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCC---CCCccceeEEEEeCCeeEEEEeecCCCc
Q 007088 311 NNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVR---HRNLVPLLGFCVAKKERLLVYSYLENGT 387 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lV~e~~~~gs 387 (618)
.+.|+.|....+|+... ++..+++|+.... ....+..|.+.|+.+. ...+++++.+....+..++||||+++..
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 46789999999999986 4667888987643 3566889998888873 3678889999888888999999999876
Q ss_pred ccc-----------ccCCCCC-C-----------------CcCCCHHHHH---HHH----------------HHHHHHH-
Q 007088 388 LYD-----------KLHPAEH-E-----------------VMHMDWPLRL---RIA----------------IGSARGL- 418 (618)
Q Consensus 388 L~~-----------~l~~~~~-~-----------------~~~l~~~~~~---~i~----------------~~i~~~L- 418 (618)
+.. .++.... . ...-+|.... ++. .+++..+
T Consensus 118 ~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~ 197 (312)
T 3jr1_A 118 NKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVA 197 (312)
T ss_dssp CCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 532 1111110 0 0112454322 111 1111112
Q ss_pred HHHHh-CCCCCceecCCCCCCeeeCCCCceEEcccC
Q 007088 419 AWLHH-NCNPRIIHRNISSKCILLDGDFEPKLSDFG 453 (618)
Q Consensus 419 ~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 453 (618)
..|.. ...|.++|+|+.+.|++++.++ +.|.|+.
T Consensus 198 ~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 198 DTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 23321 2346899999999999999887 8899974
No 414
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.91 E-value=2.1e-05 Score=82.31 Aligned_cols=74 Identities=12% Similarity=-0.019 Sum_probs=49.4
Q ss_pred CcEEeecCCeeEEEEEeC-CCcEEEEEEeccCc--------cCHHHHHHHHHHHhcCCC--C-CccceeEEEEeCCeeEE
Q 007088 311 NNIIGTGRTGATYIAMLP-GGCFIMIKRLEDSQ--------HSEKEFLSEINTLGSVRH--R-NLVPLLGFCVAKKERLL 378 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~E~~~l~~l~h--~-niv~l~~~~~~~~~~~l 378 (618)
.+.||.|..+.||++... ++..+++|...... .....+..|.++++.+.. + .+.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457899999999999753 56889999764321 123456778888887632 3 34455544 4455789
Q ss_pred EEeecCCC
Q 007088 379 VYSYLENG 386 (618)
Q Consensus 379 V~e~~~~g 386 (618)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999864
No 415
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.87 E-value=1e-06 Score=90.96 Aligned_cols=127 Identities=16% Similarity=0.201 Sum_probs=86.9
Q ss_pred CcEEEEEecCCc-ceeeCCcCCCCCCCCCeEEccCCcCccccCchhh-hcCCCCCEEEeeC--CCCccc--C---CCCC-
Q 007088 82 NKVLNIRLSDMG-LKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDIS-SRLQYVTSLDLSS--NSLSGE--I---PSGL- 151 (618)
Q Consensus 82 ~~v~~l~l~~~~-l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~-~~l~~L~~L~l~~--N~l~g~--i---p~~~- 151 (618)
.+++.|+|+++. + .+++ + .+.+|+.|+|..+.++...-..+. ..+++|+.|+|+. |...|. + -..+
T Consensus 172 P~L~~L~L~g~~~l--~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~ 247 (362)
T 2ra8_A 172 PLLNNLKIKGTNNL--SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFS 247 (362)
T ss_dssp TTCCEEEEECCBTC--BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSC
T ss_pred CCCcEEEEeCCCCc--eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHh
Confidence 579999998873 3 3444 4 389999999999887654434444 2489999999974 332222 1 1112
Q ss_pred -cCCCCCcEEEccCcccCCCCCcccc---ccccccccccccccccCC----CCCCCc--cccccccccCCC
Q 007088 152 -ANCTFLNVLKLNNNRFTGKIPPQLG---LLNRIKTFSVASNLLTGP----VPSFAN--VNFTAEDFANNS 212 (618)
Q Consensus 152 -~~l~~L~~l~l~~N~l~g~~p~~l~---~~~~L~~l~l~~N~l~g~----ip~~~~--~~~~~~~~~~n~ 212 (618)
..+++|+.|+|++|.+.+..+..+. .+++|+.|+|+.|.+++. ++.... .++..+++++|.
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~ 318 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNY 318 (362)
T ss_dssp TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBB
T ss_pred cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCc
Confidence 3589999999999999865554443 578999999999999874 332211 146677777774
No 416
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.85 E-value=2.1e-06 Score=94.86 Aligned_cols=105 Identities=18% Similarity=0.178 Sum_probs=62.7
Q ss_pred CcEEEEEecCCcceeeCCcCCC-CCCCCCeEEccCC-cCccc-cCchhhhcCCCCCEEEeeCCCCcccCCCCC----cCC
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIE-RCTSLTGLDLSSN-NLSGS-IPSDISSRLQYVTSLDLSSNSLSGEIPSGL----ANC 154 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~-~l~~L~~L~l~~n-~l~g~-ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~----~~l 154 (618)
.+++.|+|+++.+++..+..+. ++++|++|+|++| .++.. ++. +..++++|++|+|++|.+++..+..+ ..+
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~-~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAA-IAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHH-HHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHH-HHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 3567777777777666555554 5677777777776 44432 333 33347777777777777665433333 355
Q ss_pred CCCcEEEccCcccCCCCC-----ccccccccccccccccc
Q 007088 155 TFLNVLKLNNNRFTGKIP-----PQLGLLNRIKTFSVASN 189 (618)
Q Consensus 155 ~~L~~l~l~~N~l~g~~p-----~~l~~~~~L~~l~l~~N 189 (618)
++|+.|+|++|. +.++ ..+..+++|+.|++++|
T Consensus 184 ~~L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 184 TSLVSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp CCCCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred CcCcEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 677777777775 2222 11234567777777766
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.77 E-value=4.1e-06 Score=77.80 Aligned_cols=98 Identities=14% Similarity=0.184 Sum_probs=74.8
Q ss_pred eeCCcCCCCCCCCCeEEccCC-cCccc----cCchhhhcCCCCCEEEeeCCCCccc----CCCCCcCCCCCcEEEccCcc
Q 007088 96 GQFPRGIERCTSLTGLDLSSN-NLSGS----IPSDISSRLQYVTSLDLSSNSLSGE----IPSGLANCTFLNVLKLNNNR 166 (618)
Q Consensus 96 g~~p~~~~~l~~L~~L~l~~n-~l~g~----ip~~~~~~l~~L~~L~l~~N~l~g~----ip~~~~~l~~L~~l~l~~N~ 166 (618)
..+...+...++|++|+|++| .+... +...+.. .++|++|+|++|++... +...+...+.|+.|+|++|+
T Consensus 26 ~~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~-~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~ 104 (185)
T 1io0_A 26 ETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKT-NTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNF 104 (185)
T ss_dssp HHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTT-CCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSC
T ss_pred HHHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHh-CCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCc
Confidence 344556778899999999999 88732 3333333 68899999999999742 23345566889999999999
Q ss_pred cCCC----CCcccccccccccccc--ccccccCC
Q 007088 167 FTGK----IPPQLGLLNRIKTFSV--ASNLLTGP 194 (618)
Q Consensus 167 l~g~----~p~~l~~~~~L~~l~l--~~N~l~g~ 194 (618)
|+.. +...+...++|+.|+| ++|.++..
T Consensus 105 i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~ 138 (185)
T 1io0_A 105 ISGSGILALVEALQSNTSLIELRIDNQSQPLGNN 138 (185)
T ss_dssp CCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHH
T ss_pred CCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHH
Confidence 9853 4566777889999999 88998753
No 418
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.71 E-value=0.00047 Score=69.82 Aligned_cols=160 Identities=11% Similarity=0.073 Sum_probs=93.0
Q ss_pred ccCHHHHHHhhccCCC-----CcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCC--Ccccee
Q 007088 295 KMRLSDLMKATNSFSK-----NNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHR--NLVPLL 367 (618)
Q Consensus 295 ~~~~~~l~~~~~~y~~-----~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~ 367 (618)
.++.+++......|.. ...++ |....||+....+|+.+++|+..........+..|..++..+... .+++++
T Consensus 10 ~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~ 88 (328)
T 1zyl_A 10 TLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPV 88 (328)
T ss_dssp CCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCC
T ss_pred CCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeeccee
Confidence 3455556555555532 34566 888899998877787899999875444566777888887776321 244444
Q ss_pred EE-----EEeCCeeEEEEeecCCCccccc--------------cC----CCCC-CCcCCCHHHH----HHH---------
Q 007088 368 GF-----CVAKKERLLVYSYLENGTLYDK--------------LH----PAEH-EVMHMDWPLR----LRI--------- 410 (618)
Q Consensus 368 ~~-----~~~~~~~~lV~e~~~~gsL~~~--------------l~----~~~~-~~~~l~~~~~----~~i--------- 410 (618)
.. ....+..++||+|++|.++... ++ .... ....+++... ..+
T Consensus 89 ~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (328)
T 1zyl_A 89 AFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPS 168 (328)
T ss_dssp CBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCT
T ss_pred ecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCH
Confidence 43 2224566889999988654310 11 0000 0111222211 001
Q ss_pred ------HHHHHHHHHHHHhC----CCCCceecCCCCCCeeeCCCCceEEcccCcccc
Q 007088 411 ------AIGSARGLAWLHHN----CNPRIIHRNISSKCILLDGDFEPKLSDFGLARL 457 (618)
Q Consensus 411 ------~~~i~~~L~~LH~~----~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 457 (618)
...+-..++.+... ..+.++|+|+++.||+++ + .+.|+||+.+..
T Consensus 169 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 169 GLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp TTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11111223333221 233689999999999999 4 899999988754
No 419
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.69 E-value=0.00017 Score=73.01 Aligned_cols=160 Identities=13% Similarity=0.141 Sum_probs=89.5
Q ss_pred ccCHHHHHHhhccCCCC-----cEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCC--cccee
Q 007088 295 KMRLSDLMKATNSFSKN-----NIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRN--LVPLL 367 (618)
Q Consensus 295 ~~~~~~l~~~~~~y~~~-----~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~ 367 (618)
.++.+++......|... +.|+.|....+|+....+| .+++|+..... ....+..|+.++..+.... +.+++
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~-~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV-EKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC-CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 35566777766667652 3466688889999987666 57789886521 2234556777766653211 33333
Q ss_pred EE------EEeCCeeEEEEeecCCCccccc--------------cCC----CCCCC-cC---CCHHHHHH----------
Q 007088 368 GF------CVAKKERLLVYSYLENGTLYDK--------------LHP----AEHEV-MH---MDWPLRLR---------- 409 (618)
Q Consensus 368 ~~------~~~~~~~~lV~e~~~~gsL~~~--------------l~~----~~~~~-~~---l~~~~~~~---------- 409 (618)
.. ....+..+++|+|++|..+... ++. ..... .. ..|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 21 1234567899999998654321 110 00000 00 11222110
Q ss_pred --HHHHHHHHHHHHHhC----CCCCceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 410 --IAIGSARGLAWLHHN----CNPRIIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 410 --i~~~i~~~L~~LH~~----~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
+...+...++++++. ..++++|+|+.+.||+++++..+.|+||+.+.
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011234455566532 13479999999999999887656899998775
No 420
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.68 E-value=0.00021 Score=71.05 Aligned_cols=75 Identities=17% Similarity=0.212 Sum_probs=55.1
Q ss_pred CCcEEeecCCeeEEEEEeCCCcEEEEEEeccCc-cCHHHHHHHHHHHhcCCC---CCccceeEEEEeCCeeEEEEeecCC
Q 007088 310 KNNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQ-HSEKEFLSEINTLGSVRH---RNLVPLLGFCVAKKERLLVYSYLEN 385 (618)
Q Consensus 310 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~~~~~lV~e~~~~ 385 (618)
..+.+|.|..+.||+.+..+|+.|++|+..... .....|..|...|+.+.. -.+.+++++. ..++||||+++
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~ 94 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecc
Confidence 356799999999999999999999999876433 233457889998887742 2345555542 34789999987
Q ss_pred Ccc
Q 007088 386 GTL 388 (618)
Q Consensus 386 gsL 388 (618)
+..
T Consensus 95 ~~~ 97 (288)
T 3f7w_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred cCC
Confidence 643
No 421
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.67 E-value=0.0001 Score=73.99 Aligned_cols=71 Identities=11% Similarity=0.033 Sum_probs=44.9
Q ss_pred CcEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCc-cceeEEEEeCCeeEEEEeec-CCCcc
Q 007088 311 NNIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNL-VPLLGFCVAKKERLLVYSYL-ENGTL 388 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e~~-~~gsL 388 (618)
.+.|+.|....+|+. ..+++|+.........+..+|..+++.+....+ .+++++ +.+.-++|+||+ ++.++
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 678999999999998 558888876532111123467777776643233 455554 344457899999 65444
No 422
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.50 E-value=0.00019 Score=75.61 Aligned_cols=79 Identities=11% Similarity=0.058 Sum_probs=48.2
Q ss_pred CCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCC---CCCCccchHHHHHHHH
Q 007088 427 PRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTL---VATPKGDVYSFGVVLL 503 (618)
Q Consensus 427 ~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDVwS~Gvil~ 503 (618)
+.++|+|++|.|||++.++ ++++||+.+..-.... ........ -...|.+|+..... ......++......+|
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~-Dla~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGF-DIGAYLGN--LILAFFAQDGHATQENDRKEYKQWILRTIEQTW 307 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHH-HHHHHHHH--HHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHH-HHHHHHHH--HHHHHHhcccccccccchHHHHHHHHHHHHHHH
Confidence 3799999999999998876 9999999887543211 10110000 01345666544311 1122355668888888
Q ss_pred HHHhCC
Q 007088 504 ELITGE 509 (618)
Q Consensus 504 elltG~ 509 (618)
+.++++
T Consensus 308 ~~y~~~ 313 (420)
T 2pyw_A 308 NLFNKR 313 (420)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887653
No 423
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.47 E-value=0.00024 Score=73.47 Aligned_cols=143 Identities=15% Similarity=0.089 Sum_probs=85.1
Q ss_pred CcEEeecCCeeEEEEEeC--------CCcEEEEEEeccCccCHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeeEEEEe
Q 007088 311 NNIIGTGRTGATYIAMLP--------GGCFIMIKRLEDSQHSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e 381 (618)
.+.+..|-...+|+.... ++..+++|+..........+.+|..+++.+. +.-..++++++.+ .+|||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 356777888899999864 2478999987543334566778999988874 3334567766543 29999
Q ss_pred ecCCCccccc-c----------------CCCCC-CCcCC--CHHHHHHHHHHHHH-------------------HHHHHH
Q 007088 382 YLENGTLYDK-L----------------HPAEH-EVMHM--DWPLRLRIAIGSAR-------------------GLAWLH 422 (618)
Q Consensus 382 ~~~~gsL~~~-l----------------~~~~~-~~~~l--~~~~~~~i~~~i~~-------------------~L~~LH 422 (618)
|++|.+|..- + +.... -.... -|.++.++..++.. .+..|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9998666421 1 11110 01112 24555555544322 223332
Q ss_pred ----hC-CCCCceecCCCCCCeeeCCC----CceEEcccCcccc
Q 007088 423 ----HN-CNPRIIHRNISSKCILLDGD----FEPKLSDFGLARL 457 (618)
Q Consensus 423 ----~~-~~~~ivH~Dlkp~NIll~~~----~~~kl~DfG~a~~ 457 (618)
.. ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 21 12368999999999999876 6899999988753
No 424
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.40 E-value=7.7e-05 Score=76.85 Aligned_cols=127 Identities=13% Similarity=0.151 Sum_probs=82.4
Q ss_pred CcEEEEEecCCcc---------eeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCCCCc
Q 007088 82 NKVLNIRLSDMGL---------KGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPSGLA 152 (618)
Q Consensus 82 ~~v~~l~l~~~~l---------~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~~~ 152 (618)
.+++.|.+.++.. .+.+++.+..+++|+.|+|++|.-. .+|. + . +++|+.|+|..|.++...-..++
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~-~~~L~~L~L~~~~l~~~~l~~l~ 214 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-P-RPNLKSLEIISGGLPDSVVEDIL 214 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-B-CTTCSEEEEECSBCCHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-c-CCCCcEEEEecCCCChHHHHHHH
Confidence 4788888876543 2345555677899999999988322 3555 3 3 88999999998887644333343
Q ss_pred --CCCCCcEEEccC--cccCCC-----CCccc--cccccccccccccccccCCCCCC-----CccccccccccCCC
Q 007088 153 --NCTFLNVLKLNN--NRFTGK-----IPPQL--GLLNRIKTFSVASNLLTGPVPSF-----ANVNFTAEDFANNS 212 (618)
Q Consensus 153 --~l~~L~~l~l~~--N~l~g~-----~p~~l--~~~~~L~~l~l~~N~l~g~ip~~-----~~~~~~~~~~~~n~ 212 (618)
.+++|+.|+|+. |...|. +...+ ..+++|+.|+|.+|.+++..+.. ...++..++++.|.
T Consensus 215 ~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~ 290 (362)
T 2ra8_A 215 GSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGV 290 (362)
T ss_dssp HSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSC
T ss_pred HccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCC
Confidence 789999999863 332222 11222 34789999999999987543211 01146667777663
No 425
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.38 E-value=0.0004 Score=73.37 Aligned_cols=74 Identities=14% Similarity=0.178 Sum_probs=51.3
Q ss_pred CcEEeecCCeeEEEEEeCC--------CcEEEEEEeccCccCHHHHHHHHHHHhcCCCCC-ccceeEEEEeCCeeEEEEe
Q 007088 311 NNIIGTGRTGATYIAMLPG--------GCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRN-LVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lV~e 381 (618)
.+.|+.|-...+|+....+ +..+++|+.... .....+.+|..++..+...+ ..++++.+.+ .+|+|
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 3568888889999998753 578999988442 22245668998888874333 3567766532 38999
Q ss_pred ecCCCccc
Q 007088 382 YLENGTLY 389 (618)
Q Consensus 382 ~~~~gsL~ 389 (618)
|++|.++.
T Consensus 153 ~l~G~~l~ 160 (429)
T 1nw1_A 153 YIPSRPLS 160 (429)
T ss_dssp CCCEEECC
T ss_pred EeCCcccC
Confidence 99875553
No 426
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=97.21 E-value=0.00033 Score=72.43 Aligned_cols=73 Identities=14% Similarity=0.094 Sum_probs=44.6
Q ss_pred cEEeecCCeeEEEEEeCC---------CcEEEEEEeccCccCHHHHHHHHHHHhcCCCCC-ccceeEEEEeCCeeEEEEe
Q 007088 312 NIIGTGRTGATYIAMLPG---------GCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRN-LVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lV~e 381 (618)
+.|+.|....+|+....+ +..+++|+.........+...|.++++.+...+ +.++++.. . -++|||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~e 114 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIEE 114 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEEE
Confidence 457778888999998754 268889987653221112357777777774333 44666554 2 378999
Q ss_pred ecCCCcc
Q 007088 382 YLENGTL 388 (618)
Q Consensus 382 ~~~~gsL 388 (618)
|++|.++
T Consensus 115 ~i~G~~l 121 (369)
T 3c5i_A 115 WLYGDPL 121 (369)
T ss_dssp CCCSEEC
T ss_pred EecCCcC
Confidence 9997654
No 427
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.21 E-value=0.0012 Score=70.08 Aligned_cols=75 Identities=12% Similarity=0.029 Sum_probs=48.8
Q ss_pred CcEEeecCCeeEEEEEeCC-CcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCc-cceeEEEEeCCeeEEEEeecCCCcc
Q 007088 311 NNIIGTGRTGATYIAMLPG-GCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNL-VPLLGFCVAKKERLLVYSYLENGTL 388 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e~~~~gsL 388 (618)
.+.|+.|-...+|+....+ +..+++|+........-+..+|..++..+...++ .++++++. + .+||||++|.+|
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 4568888889999998765 5788899875432111112578888888864444 56777662 2 359999998665
Q ss_pred c
Q 007088 389 Y 389 (618)
Q Consensus 389 ~ 389 (618)
.
T Consensus 189 ~ 189 (458)
T 2qg7_A 189 S 189 (458)
T ss_dssp C
T ss_pred C
Confidence 3
No 428
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.16 E-value=0.00058 Score=59.12 Aligned_cols=55 Identities=24% Similarity=0.412 Sum_probs=27.2
Q ss_pred EEecCCcce-eeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCc
Q 007088 87 IRLSDMGLK-GQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLS 144 (618)
Q Consensus 87 l~l~~~~l~-g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~ 144 (618)
++.++++|+ ..+|..|. .+|+.|+|++|+|+ .||...+..+++|+.|+|++|.+.
T Consensus 13 v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 13 VDCGRRGLTWASLPTAFP--VDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EECCSSCCCTTTSCSCCC--TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEeCCCCCccccCCCCCC--cCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCee
Confidence 344455554 24443321 24555555555555 455555444555555555555443
No 429
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.12 E-value=0.0013 Score=66.74 Aligned_cols=143 Identities=11% Similarity=0.071 Sum_probs=72.4
Q ss_pred cEEeecCCee-EEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCC--CCccceeEEEEeCCeeEEEEeecCCCcc
Q 007088 312 NIIGTGRTGA-TYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRH--RNLVPLLGFCVAKKERLLVYSYLENGTL 388 (618)
Q Consensus 312 ~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lV~e~~~~gsL 388 (618)
+.|+.|.... +|+....++..+++|....... .++..|+.++..+.. -.+.+++.+..+. -+++||++.+.++
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~--~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~~l 99 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG--GDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDALF 99 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT--CCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSCBH
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC--ccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCcch
Confidence 3455554444 6677654466777776544320 234456666665532 2356677664333 3789999976555
Q ss_pred ccccCCC---------------------CCC-CcCCCHHHHH-------H-------------HHHHHHHHHHHHHh---
Q 007088 389 YDKLHPA---------------------EHE-VMHMDWPLRL-------R-------------IAIGSARGLAWLHH--- 423 (618)
Q Consensus 389 ~~~l~~~---------------------~~~-~~~l~~~~~~-------~-------------i~~~i~~~L~~LH~--- 423 (618)
.+.+... ... ...++..... . ....+...++.+..
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 4332110 000 0112211100 0 00111122223311
Q ss_pred CCCCCceecCCCCCCeeeCCC----CceEEcccCccccc
Q 007088 424 NCNPRIIHRNISSKCILLDGD----FEPKLSDFGLARLM 458 (618)
Q Consensus 424 ~~~~~ivH~Dlkp~NIll~~~----~~~kl~DfG~a~~~ 458 (618)
...+.++|+|+.+.||+++.+ +.+.|+||+.+..-
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 123479999999999999874 67999999988653
No 430
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.11 E-value=0.00092 Score=69.86 Aligned_cols=123 Identities=13% Similarity=0.203 Sum_probs=76.9
Q ss_pred cEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCc----ccCC-CCCcCCCCC
Q 007088 83 KVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLS----GEIP-SGLANCTFL 157 (618)
Q Consensus 83 ~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~----g~ip-~~~~~l~~L 157 (618)
.++.|+|+++ ++..-...|.+ ++|+.++| .|++. .|+...+.++++|+.++|.+|.+. ..|+ ..|.+|++|
T Consensus 227 ~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~-~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L 302 (401)
T 4fdw_A 227 QLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVT-NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKL 302 (401)
T ss_dssp TCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCC-EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTC
T ss_pred CCCEEecCCC-ccCcccccccc-CCccEEEe-CCCcc-EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccC
Confidence 5677777653 44222334545 77888888 45566 677777777888888888877764 1233 457778888
Q ss_pred cEEEccCcccCCCCCccccccccccccccccccccCCCC--CCCccccccccccCCC
Q 007088 158 NVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGPVP--SFANVNFTAEDFANNS 212 (618)
Q Consensus 158 ~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ip--~~~~~~~~~~~~~~n~ 212 (618)
+.++|. |.++-.-...|.+|++|+.+.|.+| ++ .|+ .|...++..+.+.+|.
T Consensus 303 ~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~-~I~~~aF~~~~L~~l~l~~n~ 356 (401)
T 4fdw_A 303 ARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VT-QINFSAFNNTGIKEVKVEGTT 356 (401)
T ss_dssp CEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CC-EECTTSSSSSCCCEEEECCSS
T ss_pred CeEEeC-CceEEEhhhhhcCCCCccEEEECcc-cc-EEcHHhCCCCCCCEEEEcCCC
Confidence 888887 4465333456777788888888555 33 232 2333355666666663
No 431
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.06 E-value=0.00074 Score=58.42 Aligned_cols=56 Identities=29% Similarity=0.414 Sum_probs=44.7
Q ss_pred CeEEccCCcCc-cccCchhhhcCCCCCEEEeeCCCCcccCCCC-CcCCCCCcEEEccCcccC
Q 007088 109 TGLDLSSNNLS-GSIPSDISSRLQYVTSLDLSSNSLSGEIPSG-LANCTFLNVLKLNNNRFT 168 (618)
Q Consensus 109 ~~L~l~~n~l~-g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~~-~~~l~~L~~l~l~~N~l~ 168 (618)
+.++.++++|+ ..+|..+ .++|+.|+|++|+|+ .||.. |..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~l---p~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAF---PVDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCC---CTTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCC---CcCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCee
Confidence 47889999986 5688765 346889999999999 56654 678889999999999875
No 432
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.02 E-value=0.0013 Score=68.63 Aligned_cols=108 Identities=13% Similarity=0.136 Sum_probs=85.2
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCc----cccCchhhhcCCCCCEEEeeCCCCcccCC-CCCcCCCC
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLS----GSIPSDISSRLQYVTSLDLSSNSLSGEIP-SGLANCTF 156 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~----g~ip~~~~~~l~~L~~L~l~~N~l~g~ip-~~~~~l~~ 156 (618)
..++.+.|. ++++..-+..|.+|++|+.++|.+|.+. ..|+...+.++++|+.++|. |+++ .|+ ..|.+|++
T Consensus 248 ~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~-~I~~~aF~~c~~ 324 (401)
T 4fdw_A 248 SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIR-ILGQGLLGGNRK 324 (401)
T ss_dssp CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCC-EECTTTTTTCCS
T ss_pred CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceE-EEhhhhhcCCCC
Confidence 457788884 5576445677999999999999998775 24888888889999999999 5577 566 45889999
Q ss_pred CcEEEccCcccCCCCCccccccccccccccccccccCC
Q 007088 157 LNVLKLNNNRFTGKIPPQLGLLNRIKTFSVASNLLTGP 194 (618)
Q Consensus 157 L~~l~l~~N~l~g~~p~~l~~~~~L~~l~l~~N~l~g~ 194 (618)
|+.++|.+| ++..-+.+|.++ +|+.+++++|.+.-.
T Consensus 325 L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l 360 (401)
T 4fdw_A 325 VTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQV 360 (401)
T ss_dssp CCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBC
T ss_pred ccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCccc
Confidence 999999665 663345678889 999999999976543
No 433
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=97.02 E-value=0.0021 Score=65.56 Aligned_cols=31 Identities=16% Similarity=0.212 Sum_probs=27.6
Q ss_pred CCceecCCCCCCeeeCCCCceEEcccCcccc
Q 007088 427 PRIIHRNISSKCILLDGDFEPKLSDFGLARL 457 (618)
Q Consensus 427 ~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 457 (618)
..++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4699999999999999888899999987764
No 434
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.68 E-value=0.00064 Score=61.84 Aligned_cols=84 Identities=14% Similarity=0.108 Sum_probs=55.3
Q ss_pred CcEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCc-CccccCchhhhcC----CCCCEEEeeCCC-CcccCCCCCcCCC
Q 007088 82 NKVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNN-LSGSIPSDISSRL----QYVTSLDLSSNS-LSGEIPSGLANCT 155 (618)
Q Consensus 82 ~~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~-l~g~ip~~~~~~l----~~L~~L~l~~N~-l~g~ip~~~~~l~ 155 (618)
-+++.|||+++.++..=-..+.+|++|+.|+|+++. ++..==..+.. + ++|++|+|+++. ++-.==..+++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~-~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~ 139 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQ-LENLQKSMLEMEIISCGNVTDKGIIALHHFR 139 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHT-CHHHHHHCCEEEEESCTTCCHHHHHHGGGCT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHh-cccccCCCCEEEcCCCCcCCHHHHHHHhcCC
Confidence 468999999887664333456788889999998874 65321122322 2 368888888864 6532123467788
Q ss_pred CCcEEEccCcc
Q 007088 156 FLNVLKLNNNR 166 (618)
Q Consensus 156 ~L~~l~l~~N~ 166 (618)
+|+.|+|++..
T Consensus 140 ~L~~L~L~~c~ 150 (176)
T 3e4g_A 140 NLKYLFLSDLP 150 (176)
T ss_dssp TCCEEEEESCT
T ss_pred CCCEEECCCCC
Confidence 88888888764
No 435
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.54 E-value=0.0005 Score=62.56 Aligned_cols=93 Identities=14% Similarity=0.127 Sum_probs=63.3
Q ss_pred eCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCC-CcccCCCCCcCC----CCCcEEEccCcc-cCCC
Q 007088 97 QFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNS-LSGEIPSGLANC----TFLNVLKLNNNR-FTGK 170 (618)
Q Consensus 97 ~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~-l~g~ip~~~~~l----~~L~~l~l~~N~-l~g~ 170 (618)
.+|.....--.|+.|||+++.++-.==..+. .+++|+.|+|+++. ++..-=..++.+ ++|+.|+|+++. +|..
T Consensus 52 ~LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~-~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~ 130 (176)
T 3e4g_A 52 HLPTGPLDKYKIQAIDATDSCIMSIGFDHME-GLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDK 130 (176)
T ss_dssp GSCCCSTTCCCEEEEEEESCCCCGGGGGGGT-TCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHH
T ss_pred cCCcccCCCceEeEEeCcCCCccHHHHHHhc-CCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHH
Confidence 3454332335799999999988633223344 49999999999985 663222234553 479999999975 7643
Q ss_pred CCcccccccccccccccccc
Q 007088 171 IPPQLGLLNRIKTFSVASNL 190 (618)
Q Consensus 171 ~p~~l~~~~~L~~l~l~~N~ 190 (618)
==..+..+++|+.|+|++..
T Consensus 131 Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 131 GIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHHHGGGCTTCCEEEEESCT
T ss_pred HHHHHhcCCCCCEEECCCCC
Confidence 22457788999999998753
No 436
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.43 E-value=0.0073 Score=62.65 Aligned_cols=141 Identities=13% Similarity=0.102 Sum_probs=82.0
Q ss_pred cEEeecCCeeEEEEEeCC--------CcEEEEEEeccCcc------------CH-------HHHHHHHHHHhcCC-CCCc
Q 007088 312 NIIGTGRTGATYIAMLPG--------GCFIMIKRLEDSQH------------SE-------KEFLSEINTLGSVR-HRNL 363 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~------------~~-------~~~~~E~~~l~~l~-h~ni 363 (618)
+.|..|-...+|+...++ +..|++++...... .+ +....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456667788899988654 36788888744211 01 12234888887774 4445
Q ss_pred cceeEEEEeCCeeEEEEeecCCCccccc-c----------------CCCCC-CCcCCC--HHHHHHHHHHHH--------
Q 007088 364 VPLLGFCVAKKERLLVYSYLENGTLYDK-L----------------HPAEH-EVMHMD--WPLRLRIAIGSA-------- 415 (618)
Q Consensus 364 v~l~~~~~~~~~~~lV~e~~~~gsL~~~-l----------------~~~~~-~~~~l~--~~~~~~i~~~i~-------- 415 (618)
.++++++.. .+|+||++|-+|..- + +.... -..... |..+.++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 677777643 289999997665321 1 11100 011122 334444443321
Q ss_pred --------------HHH----HHHHhC-CCCCceecCCCCCCeeeCCC------CceEEcccCccc
Q 007088 416 --------------RGL----AWLHHN-CNPRIIHRNISSKCILLDGD------FEPKLSDFGLAR 456 (618)
Q Consensus 416 --------------~~L----~~LH~~-~~~~ivH~Dlkp~NIll~~~------~~~kl~DfG~a~ 456 (618)
.-+ ++|... ....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 223322 22368999999999999876 789999998774
No 437
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.37 E-value=0.015 Score=54.29 Aligned_cols=102 Identities=15% Similarity=0.069 Sum_probs=65.9
Q ss_pred ccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCCeeeCCCCceEEcccCcccccCCCCCccc
Q 007088 387 TLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKCILLDGDFEPKLSDFGLARLMNPVDTHLS 466 (618)
Q Consensus 387 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 466 (618)
||.+.|...+ .+++++++|.++.|.+.+|.-+-.+..+ ..+=+.|..|++..+|.+.+.+ +.+. .
T Consensus 34 SL~eIL~~~~---~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~------~--- 98 (229)
T 2yle_A 34 SLEEILRLYN---QPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD------A--- 98 (229)
T ss_dssp EHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred cHHHHHHHcC---CCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc------c---
Confidence 7888887665 5799999999999999998876221111 1223346889999999988764 1111 0
Q ss_pred ccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCC
Q 007088 467 TFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERP 511 (618)
Q Consensus 467 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~P 511 (618)
....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 99 -------~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 99 -------GEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ---------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -------cccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 123466888763 3456788899999999999864433
No 438
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=96.29 E-value=0.0059 Score=63.96 Aligned_cols=142 Identities=8% Similarity=0.059 Sum_probs=84.5
Q ss_pred CcEEeecCCeeEEEEEeCC--------CcEEEEEEeccCccCHHHHHHHHHHHhcCC-CCCccceeEEEEeCCeeEEEEe
Q 007088 311 NNIIGTGRTGATYIAMLPG--------GCFIMIKRLEDSQHSEKEFLSEINTLGSVR-HRNLVPLLGFCVAKKERLLVYS 381 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e 381 (618)
.+.+..|-...+|+....+ +..+++|+........-+..+|..+++.+. +.-..++++.+ . -++|||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~e 150 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEE 150 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEE
Confidence 3567778888999998753 578999987543211112357888777774 33345666533 2 378999
Q ss_pred ecCCCccccc-cC----------------CC-------CC--CCcCCCHHHHHHHHHHH-------------------HH
Q 007088 382 YLENGTLYDK-LH----------------PA-------EH--EVMHMDWPLRLRIAIGS-------------------AR 416 (618)
Q Consensus 382 ~~~~gsL~~~-l~----------------~~-------~~--~~~~l~~~~~~~i~~~i-------------------~~ 416 (618)
|++|.+|..- +. .. .. ...+.-|.++.++..++ ..
T Consensus 151 fI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 230 (424)
T 3mes_A 151 FIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILE 230 (424)
T ss_dssp CCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHH
T ss_pred EeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHH
Confidence 9998765321 10 00 00 11122344444444322 22
Q ss_pred HHHHHHhC---------------------CCCCceecCCCCCCeeeCCCCceEEcccCcccc
Q 007088 417 GLAWLHHN---------------------CNPRIIHRNISSKCILLDGDFEPKLSDFGLARL 457 (618)
Q Consensus 417 ~L~~LH~~---------------------~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 457 (618)
.+.+|.+. ....++|+|+.+.||+ +.++.+.++||..+..
T Consensus 231 e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 231 EIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 23333211 1235899999999999 7788999999988754
No 439
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.59 E-value=0.015 Score=60.33 Aligned_cols=102 Identities=14% Similarity=0.318 Sum_probs=77.1
Q ss_pred cEEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCC-CCCcCCCCCcEEE
Q 007088 83 KVLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIP-SGLANCTFLNVLK 161 (618)
Q Consensus 83 ~v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip-~~~~~l~~L~~l~ 161 (618)
.++.+.+.++-.+ .-...+.+++.|+.+.+. +.+. .|+...+.++++|+.++|..| ++ .|. ..|.+|++|+.+.
T Consensus 266 ~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ 340 (394)
T 4gt6_A 266 YLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIA 340 (394)
T ss_dssp SCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEE
T ss_pred cccEEecccccce-ecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEE
Confidence 4566666544322 334568889999999996 5666 788888888999999999865 56 555 4588999999999
Q ss_pred ccCcccCCCC-Cccccccccccccccccccc
Q 007088 162 LNNNRFTGKI-PPQLGLLNRIKTFSVASNLL 191 (618)
Q Consensus 162 l~~N~l~g~~-p~~l~~~~~L~~l~l~~N~l 191 (618)
|..| ++ .| ..+|.+|++|+.+++.+|..
T Consensus 341 ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 341 IPSS-VT-KIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp ECTT-CC-BCCGGGGTTCTTCCEEEESSCHH
T ss_pred ECcc-cC-EEhHhHhhCCCCCCEEEECCcee
Confidence 9755 65 45 45788999999999988754
No 440
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.52 E-value=0.035 Score=57.07 Aligned_cols=80 Identities=16% Similarity=0.326 Sum_probs=35.7
Q ss_pred CCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCC-CCCcCCCCCcEEEccCcccCCCC-Cccccccc
Q 007088 102 IERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIP-SGLANCTFLNVLKLNNNRFTGKI-PPQLGLLN 179 (618)
Q Consensus 102 ~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip-~~~~~l~~L~~l~l~~N~l~g~~-p~~l~~~~ 179 (618)
+.++.+|+.+.+..+ +. .|+...+.++++|+.+++.+|.++ .|+ ..|.+|++|+.+.|.+| ++ .| ..+|.+|+
T Consensus 259 F~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~-~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~ 333 (379)
T 4h09_A 259 LQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIE-TLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCK 333 (379)
T ss_dssp TTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCT
T ss_pred cceeehhcccccccc-ce-eccccccccccccccccccccccc-eehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCC
Confidence 444444555544322 33 344444444555555555555444 333 23445555555555432 32 22 22344455
Q ss_pred ccccccc
Q 007088 180 RIKTFSV 186 (618)
Q Consensus 180 ~L~~l~l 186 (618)
+|+.+.+
T Consensus 334 ~L~~i~i 340 (379)
T 4h09_A 334 ALSTISY 340 (379)
T ss_dssp TCCCCCC
T ss_pred CCCEEEE
Confidence 5555444
No 441
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.40 E-value=0.04 Score=57.04 Aligned_cols=107 Identities=15% Similarity=0.387 Sum_probs=76.3
Q ss_pred CcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCC-CCcCCCCCcEEEccCcccCCCCCccccc
Q 007088 99 PRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPS-GLANCTFLNVLKLNNNRFTGKIPPQLGL 177 (618)
Q Consensus 99 p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~-~~~~l~~L~~l~l~~N~l~g~~p~~l~~ 177 (618)
...+.+++.|+.+.+.++.. .|+...+.++++|+.+.+. +.++ .|+. .|.+|++|+.++|..| ++-.-..+|.+
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~--~I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~ 332 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVV--SIGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAG 332 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCC--EECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTT
T ss_pred cceeeecccccEEecccccc--eecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhC
Confidence 45688999999999976654 4777777779999999996 5566 5664 5788999999999865 55222457889
Q ss_pred cccccccccccccccCCCCC--CCcc-ccccccccCCC
Q 007088 178 LNRIKTFSVASNLLTGPVPS--FANV-NFTAEDFANNS 212 (618)
Q Consensus 178 ~~~L~~l~l~~N~l~g~ip~--~~~~-~~~~~~~~~n~ 212 (618)
|.+|+.+.+..+ ++ .|+. |.+. +++.+.|.+|.
T Consensus 333 C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 333 CEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp CTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCH
T ss_pred CCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCce
Confidence 999999998655 33 3442 2221 45666666653
No 442
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.40 E-value=0.003 Score=58.53 Aligned_cols=83 Identities=14% Similarity=0.199 Sum_probs=42.7
Q ss_pred CcEEEEEecCC-ccee----eCCcCCCCCCCCCeEEccCCcCccc----cCchhhhcCCCCCEEEeeCCCCcccC----C
Q 007088 82 NKVLNIRLSDM-GLKG----QFPRGIERCTSLTGLDLSSNNLSGS----IPSDISSRLQYVTSLDLSSNSLSGEI----P 148 (618)
Q Consensus 82 ~~v~~l~l~~~-~l~g----~~p~~~~~l~~L~~L~l~~n~l~g~----ip~~~~~~l~~L~~L~l~~N~l~g~i----p 148 (618)
..++.|+|++| ++.. .|-..+..-+.|+.|+|++|++... |-..+.. -+.|+.|+|++|.++..= =
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~-N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIET-SPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHH-CSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhc-CCccCeEecCCCcCCHHHHHHHH
Confidence 45666777664 4431 1333445556677777777776521 1122222 355677777777766210 1
Q ss_pred CCCcCCCCCcEEEccCc
Q 007088 149 SGLANCTFLNVLKLNNN 165 (618)
Q Consensus 149 ~~~~~l~~L~~l~l~~N 165 (618)
..+..-+.|+.|+|++|
T Consensus 120 ~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHTTTTCCCSEEECCCC
T ss_pred HHHhhCCceeEEECCCC
Confidence 12333345666666654
No 443
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=94.89 E-value=0.034 Score=57.61 Aligned_cols=85 Identities=18% Similarity=0.218 Sum_probs=66.6
Q ss_pred cCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCC-CCCcCCCCCcEEEccCcccCCCCCcccccc
Q 007088 100 RGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIP-SGLANCTFLNVLKLNNNRFTGKIPPQLGLL 178 (618)
Q Consensus 100 ~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip-~~~~~l~~L~~l~l~~N~l~g~~p~~l~~~ 178 (618)
..+..+++|+.+.+.++ +. .|+...+.++++|+.++|.++ ++ .|+ ..|.+|++|+.++|..| ++-.-..+|.+|
T Consensus 291 ~~F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C 365 (394)
T 4fs7_A 291 KTFYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGC 365 (394)
T ss_dssp TTTTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTBTTC
T ss_pred ccccccccccccccccc-cc-eechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-ccEehHHHhhCC
Confidence 45778999999999765 66 688877777999999999754 66 565 46889999999999877 653234578899
Q ss_pred ccccccccccc
Q 007088 179 NRIKTFSVASN 189 (618)
Q Consensus 179 ~~L~~l~l~~N 189 (618)
.+|+.+++..|
T Consensus 366 ~~L~~i~lp~~ 376 (394)
T 4fs7_A 366 INLKKVELPKR 376 (394)
T ss_dssp TTCCEEEEEGG
T ss_pred CCCCEEEECCC
Confidence 99999988654
No 444
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=94.26 E-value=0.016 Score=38.87 Aligned_cols=31 Identities=13% Similarity=0.052 Sum_probs=18.0
Q ss_pred CchhHHHHHhhhhhHHHHHHHHhhheeeeec
Q 007088 229 SRAGIIAAAAAAGVTFTALVVGIFLFCFMRG 259 (618)
Q Consensus 229 ~~~~~ii~~v~~~v~~~~lvv~ii~~~~~r~ 259 (618)
+....|++.++.|+++++++++.++++++||
T Consensus 8 s~~~~IA~gVVgGv~~~~ii~~~~~~~~RRr 38 (44)
T 2ks1_B 8 PKIPSIATGMVGALLLLLVVALGIGLFMRRR 38 (44)
T ss_dssp SCSSSSTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcceEEeehhHHHHHHHHHHHHHHHHhhhh
Confidence 4555677777777766665555444444443
No 445
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=94.00 E-value=0.063 Score=55.55 Aligned_cols=97 Identities=14% Similarity=0.151 Sum_probs=70.5
Q ss_pred EEEEEecCCcceeeCCcCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCC-CCCcCCCCCcEEEc
Q 007088 84 VLNIRLSDMGLKGQFPRGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIP-SGLANCTFLNVLKL 162 (618)
Q Consensus 84 v~~l~l~~~~l~g~~p~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip-~~~~~l~~L~~l~l 162 (618)
++.+.+..+... .-...+.++..|+.+.+..+. ||...+..+++|+.+.+..| ++ .|+ ..+.++++|+.++|
T Consensus 255 l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~----i~~~~F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~l 327 (394)
T 4fs7_A 255 LESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVI----VPEKTFYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDL 327 (394)
T ss_dssp CCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSE----ECTTTTTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECC
T ss_pred ceeEEcCCCcce-eeccccccccccceeccCcee----eccccccccccccccccccc-cc-eechhhhcCCCCCCEEEe
Confidence 344455443222 334567888999999887763 56666667999999999865 66 565 45889999999999
Q ss_pred cCcccCCCC-Cccccccccccccccccc
Q 007088 163 NNNRFTGKI-PPQLGLLNRIKTFSVASN 189 (618)
Q Consensus 163 ~~N~l~g~~-p~~l~~~~~L~~l~l~~N 189 (618)
.++ ++ .| ..+|.+|++|+.+.+..|
T Consensus 328 p~~-v~-~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 328 PYL-VE-EIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp CTT-CC-EECTTTTTTCTTCCEECCCTT
T ss_pred CCc-cc-EEhHHhccCCCCCCEEEECcc
Confidence 755 65 44 457889999999999766
No 446
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=93.56 E-value=0.049 Score=36.35 Aligned_cols=37 Identities=19% Similarity=0.306 Sum_probs=15.7
Q ss_pred CCCCCCCCchhHHHHHhhhhhHHHHHHHHhhheeeeec
Q 007088 222 CPGVPKKSRAGIIAAAAAAGVTFTALVVGIFLFCFMRG 259 (618)
Q Consensus 222 C~~~~~~~~~~~ii~~v~~~v~~~~lvv~ii~~~~~r~ 259 (618)
|+.....+....++++++. ++++++++++++++++||
T Consensus 2 Cp~~~~~~~~~~Ia~~vVG-vll~vi~~l~~~~~~RRR 38 (44)
T 2jwa_A 2 CPAEQRASPLTSIISAVVG-ILLVVVLGVVFGILIKRR 38 (44)
T ss_dssp CCCCCCCCSHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCcccchHHHHHH-HHHHHHHHHHHHhheehh
Confidence 5543333444445555444 443333333333333333
No 447
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=93.52 E-value=0.019 Score=53.13 Aligned_cols=88 Identities=16% Similarity=0.217 Sum_probs=60.0
Q ss_pred CCCCCCCCCeEEccCC-cCccc----cCchhhhcCCCCCEEEeeCCCCcccCCCC----CcCCCCCcEEEccCcccCCC-
Q 007088 101 GIERCTSLTGLDLSSN-NLSGS----IPSDISSRLQYVTSLDLSSNSLSGEIPSG----LANCTFLNVLKLNNNRFTGK- 170 (618)
Q Consensus 101 ~~~~l~~L~~L~l~~n-~l~g~----ip~~~~~~l~~L~~L~l~~N~l~g~ip~~----~~~l~~L~~l~l~~N~l~g~- 170 (618)
-+.+-+.|++|+|++| ++... |-..+.. -+.|+.|+|++|.+...--.. +..-+.|+.|+|++|+|...
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~-N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~G 114 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACN-SKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPEL 114 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTT-CSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhh-CCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHH
Confidence 3456688999999986 77521 2223333 468999999999998321122 33457899999999999842
Q ss_pred ---CCccccccccccccccccc
Q 007088 171 ---IPPQLGLLNRIKTFSVASN 189 (618)
Q Consensus 171 ---~p~~l~~~~~L~~l~l~~N 189 (618)
|-..+..-+.|+.|+|++|
T Consensus 115 a~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 115 LARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHHHhhCCceeEEECCCC
Confidence 2233444567999999865
No 448
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.90 E-value=0.26 Score=51.12 Aligned_cols=29 Identities=24% Similarity=0.299 Sum_probs=24.5
Q ss_pred ceecCCCCCCeee------CCCCceEEcccCcccc
Q 007088 429 IIHRNISSKCILL------DGDFEPKLSDFGLARL 457 (618)
Q Consensus 429 ivH~Dlkp~NIll------~~~~~~kl~DfG~a~~ 457 (618)
++|+|+.+.||++ +++..++++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4566799999988753
No 449
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=92.72 E-value=0.054 Score=36.21 Aligned_cols=32 Identities=25% Similarity=0.299 Sum_probs=18.8
Q ss_pred CCchhHHHHHhhhhhHHHHHHHHhhheeeeec
Q 007088 228 KSRAGIIAAAAAAGVTFTALVVGIFLFCFMRG 259 (618)
Q Consensus 228 ~~~~~~ii~~v~~~v~~~~lvv~ii~~~~~r~ 259 (618)
.+....|++.++.|+++++++++.++++++||
T Consensus 6 ~s~~~aIA~gVVgGv~~v~ii~~~~~~~~RRR 37 (44)
T 2l2t_A 6 HARTPLIAAGVIGGLFILVIVGLTFAVYVRRK 37 (44)
T ss_dssp SCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCcceEEEeehHHHHHHHHHHHHHHHHhhhh
Confidence 34556677777777776666555444444443
No 450
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=92.32 E-value=0.31 Score=49.85 Aligned_cols=86 Identities=13% Similarity=0.218 Sum_probs=58.3
Q ss_pred cCCCCCCCCCeEEccCCcCccccCchhhhcCCCCCEEEeeCCCCcccCCC-CCcCCCCCcEEEccCcccCCCCCcccccc
Q 007088 100 RGIERCTSLTGLDLSSNNLSGSIPSDISSRLQYVTSLDLSSNSLSGEIPS-GLANCTFLNVLKLNNNRFTGKIPPQLGLL 178 (618)
Q Consensus 100 ~~~~~l~~L~~L~l~~n~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ip~-~~~~l~~L~~l~l~~N~l~g~~p~~l~~~ 178 (618)
..+.+++.|+.+.+..+ +. .|+...+.++.+|+.+.+..+ +. .|+. .+.+|++|+.+.+.+|.++-.-+..|.++
T Consensus 234 ~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c 309 (379)
T 4h09_A 234 GAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDC 309 (379)
T ss_dssp TTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTC
T ss_pred ccccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ce-eccccccccccccccccccccccceehhhhhcCC
Confidence 34566777777777655 54 566666666777888887654 44 4443 46778888888888887773334567788
Q ss_pred ccccccccccc
Q 007088 179 NRIKTFSVASN 189 (618)
Q Consensus 179 ~~L~~l~l~~N 189 (618)
.+|+.+.|.+|
T Consensus 310 ~~L~~i~lp~~ 320 (379)
T 4h09_A 310 VKLSSVTLPTA 320 (379)
T ss_dssp TTCCEEECCTT
T ss_pred CCCCEEEcCcc
Confidence 88888877543
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=86.66 E-value=1.4 Score=40.90 Aligned_cols=116 Identities=7% Similarity=0.053 Sum_probs=78.7
Q ss_pred CCCCccceeEEEEeCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhCCCCCceecCCCCCC
Q 007088 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLAWLHHNCNPRIIHRNISSKC 438 (618)
Q Consensus 359 ~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 438 (618)
.||++++. .+-.+.+...+.|+.-+ +...+-. ...++...+++++.+|+....+++.. +|--|.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~-----ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDN-----IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGG-----GGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHH-----HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 68888876 56566666555555433 2332221 13478899999999999888666644 788899999
Q ss_pred eeeCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCC
Q 007088 439 ILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTH 513 (618)
Q Consensus 439 Ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~ 513 (618)
|+++.++.+++.-.|+...+.+.. .+...=.-.+=+++..+++++..|.
T Consensus 110 L~f~~~~~p~i~~RGik~~l~P~~--------------------------~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVVDPLP--------------------------VSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTTBSCCC--------------------------CCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccCCCCCC--------------------------CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999998877654332211 1111223356778888999988875
No 452
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=84.80 E-value=0.77 Score=29.69 Aligned_cols=28 Identities=29% Similarity=0.307 Sum_probs=15.2
Q ss_pred CCchhHHHHHhhhhhHHHHHHHHhhhee
Q 007088 228 KSRAGIIAAAAAAGVTFTALVVGIFLFC 255 (618)
Q Consensus 228 ~~~~~~ii~~v~~~v~~~~lvv~ii~~~ 255 (618)
..+.+.|+++++..++.+++++++.+|+
T Consensus 7 ~ls~GaIAGiVvG~v~gv~li~~l~~~~ 34 (38)
T 2k1k_A 7 GLTGGEIVAVIFGLLLGAALLLGILVFR 34 (38)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCceeeeehHHHHHHHHHHHHHHHH
Confidence 3455667666666555555555444433
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=84.57 E-value=1.8 Score=40.27 Aligned_cols=115 Identities=13% Similarity=0.123 Sum_probs=75.5
Q ss_pred CCCCccceeEEEEeCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHHHHHHH-HHHhCCCCCceecCCCCC
Q 007088 359 RHRNLVPLLGFCVAKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGSARGLA-WLHHNCNPRIIHRNISSK 437 (618)
Q Consensus 359 ~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~-~LH~~~~~~ivH~Dlkp~ 437 (618)
.||++ -..+-.+.+...+.++.-+++.=...+ ..++...+++++.+|+.... +++. -+|--+.|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i-------~~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI-------RKTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH-------HTSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH-------HhcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCc
Confidence 57887 445556667766666654333222223 23788899999999887766 5554 478889999
Q ss_pred CeeeCCCCceEEcccCcccccCCCCCcccccccCCCCcccccCCCCCCCCCCCCccchHHHHHHHHHHHhCCCCCC
Q 007088 438 CILLDGDFEPKLSDFGLARLMNPVDTHLSTFVNGEFGDLGYVAPEYPRTLVATPKGDVYSFGVVLLELITGERPTH 513 (618)
Q Consensus 438 NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~Gvil~elltG~~Pf~ 513 (618)
||++|.++.+++.-.|+-..+ +|.-. +..-=.-.+=+++..++.++..|.
T Consensus 114 NL~f~~~~~p~i~hRGi~~~l---------------------pP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKESL---------------------PPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GEEECTTCCEEESCCEETTTB---------------------SSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred eEEEeCCCcEEEEEcCCcccC---------------------CCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999887765433 22211 111113356678888888887664
No 454
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=72.90 E-value=0.42 Score=50.52 Aligned_cols=59 Identities=5% Similarity=-0.058 Sum_probs=17.8
Q ss_pred CcEEeecCCeeEEEEEeCC-CcEEEE------EEeccCc---cCHHHHHHHHHHHhcCCCCCccceeEEEEe
Q 007088 311 NNIIGTGRTGATYIAMLPG-GCFIMI------KRLEDSQ---HSEKEFLSEINTLGSVRHRNLVPLLGFCVA 372 (618)
Q Consensus 311 ~~~lG~G~~g~Vy~~~~~~-~~~vav------K~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 372 (618)
.+.|| ||.||+|.+.. ..+||+ |..+... .....+.+|..+++.++|||+++.+++...
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 45565 99999999754 467888 7665432 223457888889999999999999888654
No 455
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=67.49 E-value=4 Score=26.67 Aligned_cols=17 Identities=18% Similarity=0.176 Sum_probs=9.4
Q ss_pred chhHHHHHhhhhhHHHH
Q 007088 230 RAGIIAAAAAAGVTFTA 246 (618)
Q Consensus 230 ~~~~ii~~v~~~v~~~~ 246 (618)
....++++++.|+++++
T Consensus 11 ~~~~I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 11 GNLAVIGGVAVGVVLLL 27 (41)
T ss_dssp SSTHHHHHHHHHHHHHH
T ss_pred ceEEEEeehhHHHHHHH
Confidence 34455666666665544
No 456
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=49.94 E-value=56 Score=32.27 Aligned_cols=135 Identities=13% Similarity=0.057 Sum_probs=70.7
Q ss_pred cEEeecCCeeEEEEEeCCCcEEEEEEeccCccCHHHHHHHHHHHhcCCCCCccceeEEE--------------E------
Q 007088 312 NIIGTGRTGATYIAMLPGGCFIMIKRLEDSQHSEKEFLSEINTLGSVRHRNLVPLLGFC--------------V------ 371 (618)
Q Consensus 312 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~--------------~------ 371 (618)
+....| .+.||.+.. ++..|+||-. .....+-+-.++...-.+.-|+.. ++.+. .
T Consensus 75 ~~s~~G-stgvff~~t-d~~~~VVK~s--~~l~~E~l~s~LA~~LGlpiP~~R-iv~~~~~E~~e~~~~L~~~~~~~~~l 149 (342)
T 1cja_A 75 ERSEKG-TEGLFFVET-ESGVFIVKRS--TNIESETFCSLLCMRLGLHAPKVR-VVSSNSEEGTNMLECLAAIDKSFRVI 149 (342)
T ss_dssp EECCST-TSCEEEEEE-SSCEEEEECC--TTHHHHHHHHHHHHHHTCCCCCEE-EEESSSHHHHHHHHHHHHHCSSSCHH
T ss_pred EeccCC-CCCeEEEEe-CCCEEEEeCc--HHHHHHHHHHHHHHHhCCCCCCee-EEeeCcHHHHHHHHHHHHhhhhhHHH
Confidence 333445 455665555 5778899954 222333445555555556656521 11111 0
Q ss_pred ---eCCeeEEEEeecCCCccccccCCCCCCCcCCCHHHHHHHHHHH--HHHHHHHHhCCC-CCce-ecCCCCCCeeeCCC
Q 007088 372 ---AKKERLLVYSYLENGTLYDKLHPAEHEVMHMDWPLRLRIAIGS--ARGLAWLHHNCN-PRII-HRNISSKCILLDGD 444 (618)
Q Consensus 372 ---~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i--~~~L~~LH~~~~-~~iv-H~Dlkp~NIll~~~ 444 (618)
.....+++|||.+|..|.+.-..... ..+... .+.++ +-++.++..... .+.+ +.--.++|||++.+
T Consensus 150 ~~l~~~~~~l~meyv~G~~L~e~~~~~~~--~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~ 223 (342)
T 1cja_A 150 TTLANQANILLMELVRGITLNKLTTTSAP--EVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSER 223 (342)
T ss_dssp HHHTTCSEEEEEECCCEEESTTCCSSSHH--HHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESB
T ss_pred HHhhcccceehhhhcCCCccccchhhhhh--hhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEeCC
Confidence 01245699999997666554322100 112222 23332 334555555432 1222 22357899999765
Q ss_pred Cc-eEEcccCcccc
Q 007088 445 FE-PKLSDFGLARL 457 (618)
Q Consensus 445 ~~-~kl~DfG~a~~ 457 (618)
.. +.++|-+.+..
T Consensus 224 n~~~~~IDhn~af~ 237 (342)
T 1cja_A 224 GATVVPIDSKIIPL 237 (342)
T ss_dssp TTCEEECSCCCCCC
T ss_pred CCeEEEEcCCcccc
Confidence 54 88999998854
No 457
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=37.09 E-value=1.6e+02 Score=31.72 Aligned_cols=85 Identities=8% Similarity=0.013 Sum_probs=51.3
Q ss_pred cceeEEEEeCCeeEEEEeecCCCccccccCCC----------CCC---CcCCCHHHHHHHHHHHH--HHHHHHHhCCCCC
Q 007088 364 VPLLGFCVAKKERLLVYSYLENGTLYDKLHPA----------EHE---VMHMDWPLRLRIAIGSA--RGLAWLHHNCNPR 428 (618)
Q Consensus 364 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~----------~~~---~~~l~~~~~~~i~~~i~--~~L~~LH~~~~~~ 428 (618)
++.|.+.......- +.|++++-++.+.+... ... .....+..+..++..+| .-+.|+=..
T Consensus 402 i~~Y~Vipls~~~G-lIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGi---- 476 (614)
T 3ls8_A 402 LTPYKVLATSTKHG-FMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGV---- 476 (614)
T ss_dssp CCCCCEEESSSSEE-EEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred eeccEEEEecCCCc-eEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeec----
Confidence 44555555554444 35777765554443211 110 01123555666666654 355666544
Q ss_pred ceecCCCCCCeeeCCCCceEEcccCccc
Q 007088 429 IIHRNISSKCILLDGDFEPKLSDFGLAR 456 (618)
Q Consensus 429 ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 456 (618)
+|=.++|||++.+|++.=+|||..-
T Consensus 477 ---gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 477 ---GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp ---CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred ---cCCCCcceeEcCCCCEeeeehHHhh
Confidence 5677999999999999999999874
No 458
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=34.84 E-value=37 Score=23.60 Aligned_cols=21 Identities=24% Similarity=0.221 Sum_probs=11.3
Q ss_pred chhHHHHHhhhhhHHHHHHHH
Q 007088 230 RAGIIAAAAAAGVTFTALVVG 250 (618)
Q Consensus 230 ~~~~ii~~v~~~v~~~~lvv~ 250 (618)
....|+.++++|..+.++++.
T Consensus 8 p~WiIi~svl~GLLLL~Lii~ 28 (54)
T 2l8s_A 8 PLWVILLSAFAGLLLLMLLIL 28 (54)
T ss_dssp CTHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHH
Confidence 445566666666555544443
No 459
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=33.04 E-value=18 Score=26.15 Aligned_cols=17 Identities=29% Similarity=0.462 Sum_probs=7.6
Q ss_pred hhhhhHHHHHHHHhhhe
Q 007088 238 AAAGVTFTALVVGIFLF 254 (618)
Q Consensus 238 v~~~v~~~~lvv~ii~~ 254 (618)
+..+++.+++++++.++
T Consensus 13 vlGg~~~lll~~glcI~ 29 (70)
T 2klu_A 13 VLGGVAGLLLFIGLGIF 29 (70)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHH
Confidence 33344444444444444
No 460
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=26.71 E-value=60 Score=22.56 Aligned_cols=21 Identities=10% Similarity=0.104 Sum_probs=10.6
Q ss_pred chhHHHHHhhhhhHHHHHHHH
Q 007088 230 RAGIIAAAAAAGVTFTALVVG 250 (618)
Q Consensus 230 ~~~~ii~~v~~~v~~~~lvv~ 250 (618)
....|+.++++|+.++++++.
T Consensus 11 p~wiIi~svl~GLllL~li~~ 31 (54)
T 2knc_A 11 PIWWVLVGVLGGLLLLTILVL 31 (54)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHH
Confidence 345555555555554444433
No 461
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=22.89 E-value=97 Score=24.42 Aligned_cols=40 Identities=15% Similarity=0.271 Sum_probs=17.7
Q ss_pred cCchhhhcCCCCCEEEeeCCCCcccCC-CCCcCCCCCcEEEcc
Q 007088 122 IPSDISSRLQYVTSLDLSSNSLSGEIP-SGLANCTFLNVLKLN 163 (618)
Q Consensus 122 ip~~~~~~l~~L~~L~l~~N~l~g~ip-~~~~~l~~L~~l~l~ 163 (618)
|....|.++++|+.+.|..+ ++ .|- ..|.+|.+|+.+.+.
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~-~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IG-LLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SS-CCCTTSSTTCTTCCCEEEC
T ss_pred ecHHHhcCCCCCcEEEcCCc-hh-eEcHHHHhccCCccEEEEc
Confidence 33333334444554444433 22 121 335555666655554
Done!