Query 007089
Match_columns 618
No_of_seqs 319 out of 1866
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 16:52:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007089.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007089hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3abz_A Beta-glucosidase I; gly 100.0 2E-130 6E-135 1135.5 48.4 535 8-613 94-834 (845)
2 3zyz_A Beta-D-glucoside glucoh 100.0 1E-129 3E-134 1114.1 48.1 551 8-614 105-711 (713)
3 2x41_A Beta-glucosidase; hydro 100.0 1E-128 4E-133 1111.5 42.8 530 8-613 111-711 (721)
4 3rrx_A EXO-1,3/1,4-beta-glucan 100.0 2.6E-98 9E-103 855.7 34.3 421 8-478 154-619 (822)
5 1x38_A Beta-D-glucan exohydrol 100.0 5.3E-97 2E-101 833.6 35.6 421 8-473 139-601 (602)
6 3bmx_A Uncharacterized lipopro 100.0 1.1E-86 3.9E-91 753.9 31.8 404 8-475 168-640 (642)
7 3sql_A Glycosyl hydrolase fami 100.0 2.2E-61 7.6E-66 528.8 24.5 351 8-416 142-523 (535)
8 3tev_A Glycosyl hyrolase, fami 100.0 6.1E-49 2.1E-53 412.3 16.1 190 8-216 125-340 (351)
9 2oxn_A Beta-hexosaminidase; TI 100.0 4.6E-42 1.6E-46 358.7 4.9 183 8-207 109-309 (340)
10 4gvf_A Beta-hexosaminidase; TI 100.0 1.2E-41 4E-46 356.1 8.0 183 8-207 112-315 (349)
11 4g6c_A Beta-hexosaminidase 1; 100.0 8.1E-41 2.8E-45 350.0 9.5 179 8-206 124-322 (348)
12 3idu_A Uncharacterized protein 96.9 0.0025 8.4E-08 56.7 7.7 50 518-576 34-84 (127)
13 2l0d_A Cell surface protein; s 96.4 0.011 3.9E-07 51.3 8.4 61 518-600 20-82 (114)
14 2kut_A Uncharacterized protein 96.0 0.0061 2.1E-07 53.6 4.6 54 518-575 17-72 (122)
15 3isy_A Bsupi, intracellular pr 93.1 0.38 1.3E-05 41.9 8.7 67 518-600 19-99 (120)
16 2e6j_A Hydin protein; PAPD, st 89.7 0.71 2.4E-05 39.1 6.8 61 518-585 27-88 (112)
17 4ep8_B Urease subunit beta; al 88.5 0.69 2.3E-05 38.4 5.4 51 519-573 20-82 (101)
18 2iaa_C Azurin; quinoprotein, t 88.0 0.8 2.7E-05 40.4 6.0 53 520-575 27-99 (128)
19 3fsa_A Azurin; copper, cupredo 87.8 0.77 2.6E-05 40.3 5.6 56 520-576 28-101 (125)
20 2x3c_A Toxic extracellular end 87.1 1.1 3.7E-05 46.4 7.2 62 518-581 37-116 (343)
21 1w8o_A Bacterial sialidase; 3D 86.8 1.2 4.3E-05 49.3 8.2 102 461-602 337-440 (601)
22 1nwp_A Azurin; electron transp 86.4 0.9 3.1E-05 40.0 5.4 15 561-575 86-100 (128)
23 1cuo_A Protein (azurin ISO-2); 85.9 1.3 4.3E-05 39.1 6.1 15 561-575 86-100 (129)
24 1yew_A Particulate methane mon 85.8 1.7 5.9E-05 44.5 7.6 55 518-576 265-336 (382)
25 4ac7_B Urease subunit beta; hy 85.1 1.4 4.7E-05 38.1 5.6 51 519-573 26-88 (126)
26 4ubp_B Protein (urease (chain 85.1 1.4 4.7E-05 38.1 5.6 51 519-573 26-88 (126)
27 3ay2_A Lipid modified azurin p 85.0 0.69 2.4E-05 42.8 4.1 15 561-575 125-139 (167)
28 2ccw_A Azurin II, AZN-2; elect 84.6 1.3 4.4E-05 39.1 5.5 15 561-575 86-100 (129)
29 2ys4_A Hydrocephalus-inducing 72.9 4.9 0.00017 34.6 5.4 56 518-584 42-97 (122)
30 3rfr_A PMOB; membrane, oxidore 71.6 5.3 0.00018 41.3 6.0 53 518-576 299-368 (419)
31 3qga_A UREA2, fusion of urease 69.9 5.1 0.00018 38.0 5.0 51 519-573 125-187 (225)
32 1e9y_A Urease subunit alpha; h 67.4 5 0.00017 38.4 4.4 51 520-574 126-188 (238)
33 3qbt_B Inositol polyphosphate 64.5 18 0.00063 31.9 7.5 55 518-576 44-100 (140)
34 4dzg_A PLIG; lysozyme inhibito 63.4 9.5 0.00032 32.7 5.1 44 560-603 34-95 (114)
35 2aan_A Auracyanin A; cupredoxi 63.2 13 0.00044 32.5 6.3 27 559-601 98-124 (139)
36 3kmh_A D-lyxose isomerase; cup 63.0 6.3 0.00022 38.1 4.3 56 525-586 131-196 (246)
37 2qsv_A Uncharacterized protein 62.7 15 0.00051 35.1 7.1 51 518-576 135-185 (220)
38 1xf1_A C5A peptidase, SCP; hyd 60.6 7.5 0.00026 45.6 5.3 58 518-576 500-564 (926)
39 2cal_A Rusticyanin; iron respi 54.1 25 0.00085 31.5 6.6 64 520-601 70-138 (154)
40 2qsv_A Uncharacterized protein 50.8 68 0.0023 30.3 9.5 52 518-580 20-72 (220)
41 3hrz_B Cobra venom factor; ser 50.4 46 0.0016 32.4 8.4 57 518-576 97-154 (252)
42 3qis_A Inositol polyphosphate 48.9 39 0.0013 34.9 7.9 55 518-576 47-103 (366)
43 2xwx_A GBPA, glcnac-binding pr 44.4 39 0.0013 35.3 7.0 61 518-602 312-372 (391)
44 4hci_A Cupredoxin 1; structura 42.9 36 0.0012 27.7 5.4 49 520-600 37-85 (100)
45 1iby_A Nitrosocyanin; RED copp 42.2 23 0.00078 29.5 4.1 41 520-576 47-87 (112)
46 3q48_A Chaperone CUPB2; IG fol 41.7 61 0.0021 31.7 7.6 54 520-575 45-102 (257)
47 4gy7_A Urease; JACK bean, hydr 41.0 21 0.00073 41.3 4.8 51 519-573 151-213 (840)
48 4ay0_A Chaperone protein CAF1M 40.3 65 0.0022 30.7 7.4 53 520-576 29-84 (218)
49 2lv4_A Putative outer membrane 39.0 78 0.0027 27.3 6.7 65 550-615 48-134 (146)
50 2co7_B SAFB chaperone, putativ 37.9 70 0.0024 30.5 7.2 52 520-575 29-81 (221)
51 4hs4_A Chromate reductase; tri 36.2 52 0.0018 30.6 5.9 54 315-379 62-120 (199)
52 2hr0_B Complement C3 alpha' ch 35.0 84 0.0029 36.6 8.7 57 518-576 96-154 (915)
53 4g9s_B Inhibitor of G-type lys 34.5 76 0.0026 26.6 6.1 12 590-601 78-90 (111)
54 4djm_A DRAB; chaperone, PILI; 34.4 87 0.003 30.2 7.3 52 520-575 39-91 (239)
55 3lcm_A SMU.1420, putative oxid 31.7 65 0.0022 29.7 5.8 55 315-380 62-131 (196)
56 3gee_A MNME, tRNA modification 31.5 57 0.0019 35.0 6.0 102 102-206 76-187 (476)
57 4fxk_B Complement C4-A alpha c 28.4 52 0.0018 37.4 5.3 55 518-576 169-224 (767)
58 3p0r_A Azoreductase; structura 27.5 65 0.0022 30.1 5.0 54 317-381 83-151 (211)
59 2q3z_A Transglutaminase 2; tra 26.8 64 0.0022 36.2 5.4 57 518-576 488-548 (687)
60 4h7p_A Malate dehydrogenase; s 26.6 21 0.00071 36.7 1.4 56 322-383 96-155 (345)
61 2x0j_A Malate dehydrogenase; o 26.3 16 0.00055 36.7 0.5 56 323-383 66-123 (294)
62 1klf_A FIMC chaperone, chapero 26.2 1.1E+02 0.0039 28.6 6.4 52 520-574 17-69 (205)
63 2pn5_A TEP1R, thioester-contai 25.8 1.2E+02 0.0043 36.7 8.3 62 518-580 681-744 (1325)
64 1rli_A Trp repressor binding p 25.1 1.1E+02 0.0037 27.3 6.0 54 316-380 61-127 (184)
65 1g43_A Scaffolding protein; be 25.0 26 0.00088 31.8 1.6 34 555-589 97-132 (160)
66 2hpv_A FMN-dependent NADH-azor 24.8 77 0.0026 29.2 5.0 37 317-364 85-121 (208)
67 1l4i_A SFAE protein; periplasm 24.4 1.1E+02 0.0038 28.6 6.0 51 520-573 17-68 (206)
68 5mdh_A Malate dehydrogenase; o 24.1 47 0.0016 33.8 3.5 58 322-383 75-134 (333)
69 1t5b_A Acyl carrier protein ph 24.1 97 0.0033 28.0 5.5 36 318-364 78-113 (201)
70 3ha2_A NADPH-quinone reductase 23.8 1.2E+02 0.004 27.7 5.9 57 314-381 39-105 (177)
71 2gim_A Plastocyanin; beta shee 23.7 67 0.0023 26.0 3.9 18 557-574 62-79 (106)
72 3u7i_A FMN-dependent NADH-azor 23.7 88 0.003 29.6 5.2 38 317-365 85-122 (223)
73 3o0l_A Uncharacterized protein 23.6 3.3E+02 0.011 22.8 9.1 57 518-576 39-96 (112)
74 4b9f_A Cellulosomal-scaffoldin 23.5 38 0.0013 30.4 2.3 34 555-589 94-127 (152)
75 3svl_A Protein YIEF; E. coli C 23.1 1.3E+02 0.0046 27.5 6.2 40 315-365 61-100 (193)
76 3fvw_A Putative NAD(P)H-depend 22.8 1.2E+02 0.004 27.8 5.7 40 315-365 56-95 (192)
77 3ldh_A Lactate dehydrogenase; 22.3 44 0.0015 34.0 2.8 55 324-383 87-143 (330)
78 3gfu_C Chaperone protein FAEE; 22.3 2.3E+02 0.0077 27.0 7.7 53 520-575 17-71 (224)
79 1qhq_A Protein (auracyanin); e 22.0 56 0.0019 28.3 3.2 26 560-601 98-123 (140)
80 3zqx_A Cellulose 1,4-beta-cell 21.8 21 0.00073 31.9 0.3 34 555-589 81-115 (146)
81 1g0d_A Protein-glutamine gamma 21.5 1.1E+02 0.0037 34.3 5.9 57 518-576 487-546 (695)
82 1oju_A MDH, malate dehydrogena 21.1 24 0.00083 35.3 0.6 57 322-383 65-123 (294)
83 3dnf_A ISPH, LYTB, 4-hydroxy-3 20.8 3.8E+02 0.013 26.6 9.2 149 228-413 124-278 (297)
84 1rtt_A Conserved hypothetical 20.7 80 0.0027 28.7 4.1 52 315-377 61-117 (193)
85 1vjj_A Protein-glutamine gluta 20.6 1.1E+02 0.0037 34.4 5.7 57 518-576 497-556 (692)
86 3vta_A Cucumisin; subtilisin-l 20.3 3.1E+02 0.011 30.2 9.5 78 518-614 538-618 (621)
87 3k1y_A Oxidoreductase; structu 20.1 99 0.0034 28.5 4.6 53 314-377 73-127 (191)
No 1
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=100.00 E-value=1.7e-130 Score=1135.53 Aligned_cols=535 Identities=30% Similarity=0.467 Sum_probs=465.2
Q ss_pred cceE-eCccccccCCCCCCccccccCCCHHHHHHHHHHHHHHHhcCCCCCCeEEEeecccccccCCCCCCCCcccccccc
Q 007089 8 GLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARV 86 (618)
Q Consensus 8 Gi~~-laP~~di~r~p~~gR~~e~fgeDP~l~~~~a~a~v~Glq~~~~~~~~v~a~~KHF~g~g~~~~~~~~r~~~~~~~ 86 (618)
|+|+ |||++||.|||+|||++|||||||+|+++|+.|+|+|||++ ||+||+||||||+++ ..|...++.+
T Consensus 94 Gi~~~laP~vdi~r~P~~gR~~EsfgeDP~lv~~~a~a~v~GlQ~~-----gV~a~~KHFpg~g~e----~~r~~~~~~v 164 (845)
T 3abz_A 94 NAAVILGPTTNMQRGPLGGRGFESFSEDPYLAGMATSSVVKGMQGE-----GIAATVKHFVCNDLE----DQRFSSNSIV 164 (845)
T ss_dssp TCSEEECCBCCCCSSTTCTTGGGSCCSSHHHHHHHHHHHHHHHHHT-----TCBCEEEEETTCCCC----TTTTTCEEEC
T ss_pred CCCEEecceECCCcCCCCCcccccCCCCHHHHHHHHHHHHHHHhhC-----CeeEEeeccccCCcc----cCCccccCCC
Confidence 9999 99999999999999999999999999999999999999998 799999999999865 3577778899
Q ss_pred CHHHHHHhhcHHHHHHHHcCCCceEEecccCCCCcccccCHHHHHHHHHhhcCCCcEEEccchhhhhccccccccCCHHH
Q 007089 87 SKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEE 166 (618)
Q Consensus 87 ~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~lLR~e~gf~G~ViSD~~~~~~~~~~~~~~~~~~~ 166 (618)
++++|+|+||+||+++|+++++.+||||||++||+|||+|++||++|||+||||+|+|||||++|..
T Consensus 165 ~~~~L~e~~L~PF~~ai~~ag~~~VM~syn~ing~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~~------------- 231 (845)
T 3abz_A 165 SERALREIYLEPFRLAVKHANPVCIMTAYNKVNGEHCSQSKKLLIDILRDEWKWDGMLMSDWFGTYT------------- 231 (845)
T ss_dssp CHHHHHHTTSHHHHHHHHHHCCSEEEECSSEETTEEGGGCHHHHTCCCCCCTCCCSEEECCTTCCCC-------------
T ss_pred CHHHHHHhhHHHHHHHHHhcCCCEEEecCCCcCCEeccCCHHHHHHHHhhccCCCeEEEcccccHHH-------------
Confidence 9999999999999999975559999999999999999999999999999999999999999987642
Q ss_pred HHHHHHHH--------------HHHHHHHHHCCC-CCHHHHHHHHhhhHHHHHHhC----CCCCCCCCCCCCCCCCCCCC
Q 007089 167 AAADAIKA--------------AIHTEGAVRGGL-LREEDVNLALAYTITVQMRLG----MFDGEPSAQPFGNLGPRDVC 227 (618)
Q Consensus 167 a~~~al~a--------------~~~l~~av~~G~-i~~~~ld~av~RiL~~k~~lG----l~~~~p~~~~~~~~~~~~~~ 227 (618)
+.+|++| .+.|.+||++|+ |++++||+||+|||++|+++| +|+ +|+..+ ....++
T Consensus 232 -~~~Al~AG~D~~m~~~~~~~~~~~l~~av~~G~~i~~~~id~av~RIL~~k~~~g~l~~~~~-~p~~~~----~~~~~~ 305 (845)
T 3abz_A 232 -TAAAIKNGLDIEFPGPTRWRTRALVSHSLNSREQITTEDVDDRVRQVLKMIKFVVDNLEKTG-IVENGP----ESTSNN 305 (845)
T ss_dssp -SHHHHHHTCCBBCSSSCSSCCHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHHTHHHHC-CCTTCC----CCCTTC
T ss_pred -HHHHHHcCCCcccCCchhhhHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHHhCCcccccc-CCccCc----cccccC
Confidence 2344554 237999999999 999999999999999999999 898 554221 122378
Q ss_pred CHHHHHHHHHHHhhcceeccCCCCCCCCCCCCCcEEEEEccCCCccccccccccc-cCCCcCCHHHHHHhhh--heeeec
Q 007089 228 TPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAG-VACGYTTPLQGISRYA--KTIHQA 304 (618)
Q Consensus 228 ~~~~~~la~~~A~esivLLKN~~~~LPL~~~~~~kIaviGp~a~~~~~~~G~~~g-~~~~~~t~~~~l~~~~--~~~y~~ 304 (618)
+++|+++++++|++|||||||++++|||++ .+||+||||+|+....++|+++. .+.+.++|+++|+++. .+.|..
T Consensus 306 ~~~~~~la~~~a~~sivLLKN~~~~LPL~~--~~~iaviGp~A~~~~~~Gggs~~~~~~~~vtpl~gi~~~~~~~v~y~~ 383 (845)
T 3abz_A 306 TKETSDLLRKIAADSIVLLKNKNNILPLKK--EDNIIVIGPNAKAKTSSGGGSASMNSYYVVSPYEGIVNKLGKEVDYTV 383 (845)
T ss_dssp SHHHHHHHHHHHHHHCEEEEECTTCCSCCT--TSCEEEESTTTSCCCCSCBSTTCCCBSCCCCHHHHHHHHHTSCCEEEC
T ss_pred CHHHHHHHHHHHHhCcEEeccCCcccCCCC--CCEEEEEcCCcchhhccCCCccCcccCCcCCHHHHHHHhhcCceeecc
Confidence 999999999999999999999999999975 37999999999998776665543 5778899999999874 245555
Q ss_pred ccccc------------------------------------c--------------------------------------
Q 007089 305 GCFGV------------------------------------A-------------------------------------- 310 (618)
Q Consensus 305 g~~~~------------------------------------~-------------------------------------- 310 (618)
||... .
T Consensus 384 G~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (845)
T 3abz_A 384 GAYSHKSIGGLAESSLIDAAKPADAENSGLIAKFYSNPVEERSDDEEPFHVTKVNRSNVHLFDFKHEKVDPKNPYFFVTL 463 (845)
T ss_dssp CCCCCSSCCBSGGGEESSTTSCSCTTTBSEEEEEESSCTTTSCTTCCCSEEEEECSSEEECTTCCCTTSBTTBCCCEEEE
T ss_pred ccccccccccccccccccccccccCCCCceEEEEeccCcccCcccccceeeeeccccceeecccccccccccccceeEEE
Confidence 44200 0
Q ss_pred ---------------------------------------------------------------------c----------
Q 007089 311 ---------------------------------------------------------------------C---------- 311 (618)
Q Consensus 311 ---------------------------------------------------------------------~---------- 311 (618)
+
T Consensus 464 ~~~~~~~~~g~~~~~~~~~g~~~l~idg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~y~~~v~~~~~~~~~~~~ 543 (845)
T 3abz_A 464 TGQYVPQEDGDYIFSLQVYGSGLFYLNDELIIDQKHNQERGSFCFGAGTKERTKKLTLKKGQVYNVRVEYGSGPTSGLVG 543 (845)
T ss_dssp EEEECCSSSEEEEEEEEEESEEEEEETTEEEEEESSSCCBCSTTTTTSBCCEEEEEEECTTCCEEEEEEEECTTTSCCSS
T ss_pred EEEEecCCCccEEEEEeecCceEEEECCEEEeeccccccccccccccCcccceeEEEecCCceeeEEEEeccCCcccccc
Confidence 0
Q ss_pred --------------CC-ccchHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHHhcCCCEEEEEE
Q 007089 312 --------------NG-NQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLM 376 (618)
Q Consensus 312 --------------~~-~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~~~~k~vVvVl~ 376 (618)
.+ ...+++|+++|++||++|||+|.++..++||.||.+|.||+.|.+||++|+++ ++|||||++
T Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~Av~~A~~ADvvVv~vG~~~~~e~Eg~DR~~l~LP~~Q~~LI~aV~a~-~~~tVVVl~ 622 (845)
T 3abz_A 544 EFGAGGFQAGVIKAIDDDEEIRNAAELAAKHDKAVLIIGLNGEWETEGYDRENMDLPKRTNELVRAVLKA-NPNTVIVNQ 622 (845)
T ss_dssp CCCCCEEEEEEEECCCHHHHHHHHHHHHHTSSEEEEEEECCTTTSBTTBCCSSSCCCTTHHHHHHHHHHH-CSCEEEEEE
T ss_pred cccccceeecccccccchhhHHHHHHHHhcCCEEEEEEecCCccccccCCcccccCCHHHHHHHHHHHHh-CCCEEEEEe
Confidence 00 12356788999999999999999999999999999999999999999999985 679999999
Q ss_pred cCceeecccccCCCCccEEEEccCCCcchhHHHHHHHcCCCCCCcccCcccCCccccCCCCCccccccc---cCCCCC--
Q 007089 377 CGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPGGKLPMTWYPQDYVSRLPMTDMRMRA---ARGYPG-- 451 (618)
Q Consensus 377 ~g~P~~l~~~~~~~~v~AiL~a~~~G~e~g~AlAdVL~G~~nPsGkLPvT~~p~~~~~~~p~~~~~~~~---~~~~~~-- 451 (618)
+|+|++|+|+ ++++|||++||||||+|+||||||||++|||||||+|| |++. +|+|.++ ++.. ...|.+
T Consensus 623 sG~pv~m~w~---~~v~AIL~aw~pGqegG~AiAdVLfG~vNPSGkLP~T~-p~~~-~d~P~~~-~~~~~~g~~~y~eg~ 696 (845)
T 3abz_A 623 SGTPVEFPWL---EDANALVQAWYGGNELGNAIADVLYGDVVPNGKLSLSW-PFKL-QDNPAFL-NFKTEFGRVIYGEDI 696 (845)
T ss_dssp CSSCCCCTTG---GGCSEEEECCCCCTTHHHHHHHHHTTSSCCCCCCSSCB-CSSG-GGSTTTT-SCSCBTTEEECTTTT
T ss_pred CCCcccCcch---hccCeEEEcCCCcHHHHHHHHHHhcCCcCCCCCCceee-eCch-hhCCccc-cCCCCCCceeccCCc
Confidence 9999999997 37999999999999999999999999999999999997 8887 7888653 2211 011221
Q ss_pred -CccccCC---CCcccccCcCCCCCCceec--CCccCCCcccccccccccccccccccccccccccCCCCCeeEEEEEEE
Q 007089 452 -RTYRFYK---GPVVFPFGHGMSYTTFAHT--LSKAPNQFSVPIATSLYAFKNTTISSNAIRVAHTNCNDAMSLGLHVDI 525 (618)
Q Consensus 452 -~~Yr~~~---~~~~ypFG~GLSYTtF~ys--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~V 525 (618)
.+||||+ .+|+||||||||||||+|| +++++ +. .++|+|+|
T Consensus 697 ~vgYR~y~~~~~~plfPFG~GLSYTtF~ys~~~l~v~--------------------------------~~-~~~v~v~V 743 (845)
T 3abz_A 697 FVGYRYYEKLQRKVAFPFGYGLSYTTFELDISDFKVT--------------------------------DD-KIAISVDV 743 (845)
T ss_dssp CCTHHHHHHHTCCCSBCTTCCBCSSCEEEEEEEEEEC--------------------------------SS-EEEEEEEE
T ss_pred cCCCcchhcCCCceeecccCCCcceeEEEeccccccc--------------------------------CC-eEEEEEEE
Confidence 3699997 5899999999999999999 98741 01 68999999
Q ss_pred EeCC-CCCcceEEEEeeeCCCCC-CCCccccccccccccCCCCeEEEEEEec-cCCceeEEeCC-CCEEecCceEEEEEe
Q 007089 526 KNTG-DMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIH-VCKHLSVVDKF-GIRRIPMGEHSLHIG 601 (618)
Q Consensus 526 tNtG-~~~G~evvQlY~~~~~~~-~~P~k~L~gF~kv~l~pGes~~V~~~l~-~~~~ls~~d~~-~~~~~~~G~y~i~vG 601 (618)
|||| +++|+||||||+++|.++ .+|.|+||||+||+|+||||++|+|+|+ . ++|++||.. +.|++|+|+|+|+||
T Consensus 744 ~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~-~~l~~~d~~~~~~~~e~G~y~v~vG 822 (845)
T 3abz_A 744 KNTGDKFAGSEVVQVYFSALNSKVSRPVKELKGFEKVHLEPGEKKTVNIDLELK-DAISYFNEELGKWHVEAGEYLVSVG 822 (845)
T ss_dssp EECCSSCCEEEEEEEEEEESSCSSCCCSCEEEEEEEEEECTTCEEEEEEEEEHH-HHHCEEETTTTEEEECSEEEEEEEE
T ss_pred EECCcCCCcceeeeeeEeCCCCCcchhhheeccceeEEECCCCEEEEEEEeCCh-HHeeEEecCCCeEEEcCCEEEEEEE
Confidence 9999 999999999999999876 8999999999999999999999999999 8 999999996 789999999999999
Q ss_pred CCCCeEEEEEEE
Q 007089 602 DLKHSISLQANL 613 (618)
Q Consensus 602 ~ss~~~~~~~~~ 613 (618)
.||++++++..+
T Consensus 823 ~ss~di~l~~~~ 834 (845)
T 3abz_A 823 TSSDDILSVKEF 834 (845)
T ss_dssp SSTTCEEEEEEE
T ss_pred CCCCCceeEEEE
Confidence 999999876544
No 2
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=100.00 E-value=9.8e-130 Score=1114.14 Aligned_cols=551 Identities=25% Similarity=0.371 Sum_probs=455.0
Q ss_pred cceE-eCcccc-ccCCCCCCccccccCCCHHHHHHHHHHHHHHHhcCCCCCCeEEEeecccccccCCCCCCCCccccccc
Q 007089 8 GLTY-WSPNVN-IFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNAR 85 (618)
Q Consensus 8 Gi~~-laP~~d-i~r~p~~gR~~e~fgeDP~l~~~~a~a~v~Glq~~~~~~~~v~a~~KHF~g~g~~~~~~~~r~~~~~~ 85 (618)
|+|+ |+|++| |.|||+|||++|+|||||+|+++|+.|+|+|||++ ||+||+|||||||++. .|...++.
T Consensus 105 Gi~~~laP~vd~v~r~P~~gR~~e~fgeDP~l~~~~a~a~v~Glq~~-----gV~a~~KHF~g~g~e~----~r~~~~~~ 175 (713)
T 3zyz_A 105 GIHVILGPVAGPLGKTPQGGRNWEGFGVDPYLTGIAMGQTINGIQSV-----GVQATAKHYILNEQEL----NRETISSN 175 (713)
T ss_dssp TCSEECCCBCSSCCCSTTCTTGGGTTCSCHHHHHHHHHHHHHHHHHT-----TCEEEEEEETTCCCST----TTTTCEEC
T ss_pred CCCEEECCeecccCCCCCCCcccccccCCHHHHHHHHHHHHHHHhhC-----CeEEEEecCccCCccc----cCccccCc
Confidence 9999 999999 88999999999999999999999999999999998 7999999999999764 45666789
Q ss_pred cCHHHHHHhhcHHHHHHHHcCCCceEEecccCCCCcccccCHHHHHHHHHhhcCCCcEEEccchhhhhccccccccCCHH
Q 007089 86 VSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPE 165 (618)
Q Consensus 86 ~~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~lLR~e~gf~G~ViSD~~~~~~~~~~~~~~~~~~ 165 (618)
+++++|+|+||+||+++|++| +.+||||||++||+|||+|++||++|||+||||+|+|||||+++++
T Consensus 176 v~~~~l~e~~l~pF~~ai~ag-~~~VM~syn~vng~pa~~s~~ll~~iLR~e~GF~G~VvSD~~a~~~------------ 242 (713)
T 3zyz_A 176 PDDRTLHELYTWPFADAVQAN-VASVMCSYNKVNTTWACEDQYTLQTVLKDQLGFPGYVMTDWNAQHT------------ 242 (713)
T ss_dssp CCHHHHHHTTTHHHHHHHHTT-CSEEEECSSEETTEEGGGCHHHHCCCCCCCSCCCSEEEESTTCCCC------------
T ss_pred CCHHHHHHhhhHHHHHHHHcC-CCeEEeeccccCCccCcCCHHHHHHHHHHHcCCCEEEEecCccHHH------------
Confidence 999999999999999999976 9999999999999999999999999999999999999999987532
Q ss_pred HHHHHHHHH------------------HHHHHHHHHCCCCCHHHHHHHHhhhHHHHHHhCCCCCCCCCCCCCCCCCCCCC
Q 007089 166 EAAADAIKA------------------AIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDVC 227 (618)
Q Consensus 166 ~a~~~al~a------------------~~~l~~av~~G~i~~~~ld~av~RiL~~k~~lGl~~~~p~~~~~~~~~~~~~~ 227 (618)
+.+|++| .+.|.+||++|+|+++|||+||+|||++|+++|+|+ +++. .... ....
T Consensus 243 --~~~ai~AG~D~~m~~~~~~~~~~~~~~~l~~av~~G~i~~~~id~av~RIL~~k~~lg~~~-~~~~--~~~~--~~~~ 315 (713)
T 3zyz_A 243 --TVQSANSGLDMSMPGTDFNGNNRLWGPALTNAVNSNQVPTSRVDDMVTRILAAWYLTGQDQ-AGYP--SFNI--SRNV 315 (713)
T ss_dssp --SHHHHHHTCCBBSSSSCTTSCCCCSTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTS-TTCC--CCCT--TSCC
T ss_pred --HHHHHHcCCCEeCCCCcccchhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCcc-cCCC--Cccc--cccc
Confidence 2344444 167999999999999999999999999999999997 4432 1111 1223
Q ss_pred CHHHHHHHHHHHhhcceeccCCCCCCCCCCCCCcEEEEEccCCCccc-----------------ccccccc--ccCCCcC
Q 007089 228 TPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTV-----------------TMIGNYA--GVACGYT 288 (618)
Q Consensus 228 ~~~~~~la~~~A~esivLLKN~~~~LPL~~~~~~kIaviGp~a~~~~-----------------~~~G~~~--g~~~~~~ 288 (618)
+++|+++++++|++|||||||++++|||++. +||+||||+|+... ...|+++ ..+++.+
T Consensus 316 ~~~h~~la~~~a~~sivLLKN~~~~LPL~~~--~~IaViG~~A~~~~~G~~~~~~~~~~~~~~~~~~g~gs~~~~~~~~~ 393 (713)
T 3zyz_A 316 QGNHKTNVRAIARDGIVLLKNDANILPLKKP--ASIAVVGSAAIIGNHARNSPSCNDKGCDDGALGMGWGSGAVNYPYFV 393 (713)
T ss_dssp CTTTHHHHHHHHHHTCEEEEEGGGCCSCCCC--SEEEEESGGGSCCTTTTTCTTSGGGCCCCSSCCCCBSTTCCCCSCCC
T ss_pred CHHHHHHHHHhhhcceEEEccCCCccccCCC--CEEEEECCCccccccccccccccccccccCceecccCCCCcCcCCCC
Confidence 6799999999999999999999999999864 79999999987421 1122233 3456788
Q ss_pred CHHHHHHhhhheeeeccccccccCCccchHHHHHHhhcCCEEEEEecCCcccccccC--------CCCCCCCChhHHHHH
Q 007089 289 TPLQGISRYAKTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFI--------DRAGLLLPGRQQELV 360 (618)
Q Consensus 289 t~~~~l~~~~~~~y~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~--------Dr~~l~Lp~~q~~Li 360 (618)
+++++|+++... .|+. +.......+++|+++|+++|++|||+|.. ++|+. ||.+|.||..|.+||
T Consensus 394 t~~~~i~~~~~~---~g~~-v~~~~~~~~~~a~~~A~~aDv~Iv~vg~~---~gEg~~~~~g~~gDR~~l~Lp~~Q~~Li 466 (713)
T 3zyz_A 394 APYDAINTRASS---QGTQ-VTLSNTDNTSSGASAARGKDVAIVFITAD---SGEGYITVEGNAGDRNNLDPWHNGNALV 466 (713)
T ss_dssp CHHHHHHHHHHT---TTCE-EEEECSCCHHHHHHHHTTCSEEEEEEEEC---CBCTTCCBTTBCSSCSCSSCSTTHHHHH
T ss_pred CHHHHHHHHhcc---CCeE-EEEeCCccHHHHHHHhhcCCEEEEEeccc---CCCCccccccCCCCcccccCChhHHHHH
Confidence 999999987421 1111 00111335789999999999999999854 46666 999999999999999
Q ss_pred HHHHHhcCCCEEEEEEcCceeec-ccccCCCCccEEEEccCCCcchhHHHHHHHcCCCCCCcccCcccCCccccCCCCCc
Q 007089 361 SRVAKASRGPVVLVLMCGGPVDV-SFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPGGKLPMTWYPQDYVSRLPMT 439 (618)
Q Consensus 361 ~~v~~~~~k~vVvVl~~g~P~~l-~~~~~~~~v~AiL~a~~~G~e~g~AlAdVL~G~~nPsGkLPvT~~p~~~~~~~p~~ 439 (618)
++|+++ ++|+|||+++|+|++| +|+ +.++++|||++|||||++|+||||||||++|||||||+|| |++. +|+|..
T Consensus 467 ~~v~~~-~~~~VVVl~sG~p~~~~~w~-~~~~v~Ail~aw~pGqegG~AiAdvL~G~~nPSGkLP~T~-p~~~-~d~p~~ 542 (713)
T 3zyz_A 467 QAVAGA-NSNVIVVVHSVGAIILEQIL-ALPQVKAVVWAGLPSQESGNALVDVLWGDVSPSGKLVYTI-AKSP-NDYNTR 542 (713)
T ss_dssp HHHHHH-CSCEEEEEEESSCCCCHHHH-TCTTEEEEEECCCCGGGHHHHHHHHHTTSSCCCCCCSSCB-CSCG-GGSSCC
T ss_pred HHHHHh-CCCeEEEEecCCcccchhhh-hccccCEEEEcCCCCchhhheehhhhcCCcCCCccCccee-cCCh-hhCCCc
Confidence 999975 6799999999999999 675 4568999999999999999999999999999999999997 8876 778843
Q ss_pred cccccccCCCCC---CccccCCC---CcccccCcCCCCCCceecCCccCCCcccccccccccccccccccccccccccCC
Q 007089 440 DMRMRAARGYPG---RTYRFYKG---PVVFPFGHGMSYTTFAHTLSKAPNQFSVPIATSLYAFKNTTISSNAIRVAHTNC 513 (618)
Q Consensus 440 ~~~~~~~~~~~~---~~Yr~~~~---~~~ypFG~GLSYTtF~ys~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (618)
. +..+...|.+ ++||||+. +|+||||||||||||+||++++++.. ..... .......+....
T Consensus 543 ~-~~~~~~~y~eg~~vgYRy~d~~~~~plypFG~GLSYTtF~ys~l~~~~~~-~~~~~----------~~~~~~gg~~~~ 610 (713)
T 3zyz_A 543 I-VSGGSDSFSEGLFIDYKHFDDANITPRYEFGYGLSYTKFNYSRLSVLSTA-KSGPA----------TGAVVPGGPSDL 610 (713)
T ss_dssp C-CCSSEECCTTTTCCHHHHHHHTTCCCSBCTTCCBCSSCEEEEEEEEEECC-CCEEC----------CSCEETTEETTT
T ss_pred c-ccCCccccCCCCccCceeccCCCCceeecCCCCCCcccEEEeeeEecccc-ccCcc----------cccccccccccc
Confidence 2 1111223432 57999985 79999999999999999999875310 00000 000000000001
Q ss_pred CCCeeEEEEEEEEeCCCCCcceEEEEeeeCCCCC-CCCccccccccccccCCCCeEEEEEEeccCCceeEEeCC-CCEEe
Q 007089 514 NDAMSLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKF-GIRRI 591 (618)
Q Consensus 514 ~~~~~~~v~v~VtNtG~~~G~evvQlY~~~~~~~-~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ls~~d~~-~~~~~ 591 (618)
.+. .++|+|+|||||+++|+||||||+++|.++ .+|.|+||||+||+|+||||++|+|+|++ ++|++||.. ++|++
T Consensus 611 ~~~-~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~-~~ls~~d~~~~~w~v 688 (713)
T 3zyz_A 611 FQN-VATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGFAKLNLTPGQSGTATFNIRR-RDLSYWDTASQKWVV 688 (713)
T ss_dssp TSE-EEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEEEEEEECTTCEEEEEEEEEG-GGGCEEETTTTEEEE
T ss_pred cCC-eEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhcccceeCCCCeEEEEEEEcH-HHeeeeecCCCeEEE
Confidence 122 699999999999999999999999999887 89999999999999999999999999998 999999986 78999
Q ss_pred cCceEEEEEeCCCCeEEEEEEEc
Q 007089 592 PMGEHSLHIGDLKHSISLQANLE 614 (618)
Q Consensus 592 ~~G~y~i~vG~ss~~~~~~~~~~ 614 (618)
|+|+|+|+||.||++++++..++
T Consensus 689 e~G~y~v~vG~sS~d~~l~~~~~ 711 (713)
T 3zyz_A 689 PSGSFGISVGASSRDIRLTSTLS 711 (713)
T ss_dssp CCEEEEEEEESSSSCEEEEEEEE
T ss_pred cCceEEEEEECCCCCcceeEEEE
Confidence 99999999999999999987653
No 3
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=100.00 E-value=1.1e-128 Score=1111.54 Aligned_cols=530 Identities=29% Similarity=0.443 Sum_probs=457.5
Q ss_pred cceE-eCccccccCCCCCCccccccCCCHHHHHHHHHHHHHHHhcCCCCCCeEEEeecccccccCCCCCCCCcccccccc
Q 007089 8 GLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARV 86 (618)
Q Consensus 8 Gi~~-laP~~di~r~p~~gR~~e~fgeDP~l~~~~a~a~v~Glq~~~~~~~~v~a~~KHF~g~g~~~~~~~~r~~~~~~~ 86 (618)
|+|+ |||++||.|||+|||++|||||||+|+++|+.|+|+|||++ ||+||+|||||||++ ..|...++.+
T Consensus 111 Gi~~~~aP~vdi~r~p~~gR~~e~fgeDP~l~~~~a~a~v~G~q~~-----gV~a~~KHF~g~g~e----~~r~~~ds~~ 181 (721)
T 2x41_A 111 GVDVLLAPAMNIHRNPLCGRNFEYYSEDPVLSGEMASSFVKGVQSQ-----GVGACIKHFVANNQE----TNRMVVDTIV 181 (721)
T ss_dssp TCSEECCCBCCCCCSTTCTTGGGSCCSSHHHHHHHHHHHHHHHHTT-----TCBCEEEEETTCCCC----TTTTTCEEEC
T ss_pred CCCEEeeceECCCCCCCCCcccccCCCCHHHHHHHHHHHHHHhhhC-----CeEEEecccccCCCC----CCCCcccCCC
Confidence 9999 99999999999999999999999999999999999999998 799999999999965 3577778899
Q ss_pred CHHHHHHhhcHHHHHHHHcCCCceEEecccCCCCcccccCHHHHHHHHHhhcCCCcEEEccchhhhhccccccccCCHHH
Q 007089 87 SKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEE 166 (618)
Q Consensus 87 ~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~lLR~e~gf~G~ViSD~~~~~~~~~~~~~~~~~~~ 166 (618)
++++|+|+||+||+++|+++++.+||||||++||+|||+|+++|++|||+||||+|+|||||+++.+
T Consensus 182 ~~~~l~e~~l~pF~~ai~~a~~~~vM~sy~~i~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~~------------- 248 (721)
T 2x41_A 182 SERALREIYLRGFEIAVKKSKPWSVMSAYNKLNGKYCSQNEWLLKKVLREEWGFEGFVMSDWYAGDN------------- 248 (721)
T ss_dssp CHHHHHHTHHHHHHHHHHHHCCSEEEECSSEETTEEGGGCHHHHTCCCCCCTCCCSEEEECTTCSSC-------------
T ss_pred CHHHHHhhhHHHHHHHHHhcCCCEEEecCCCCCCccccCCHHHHHHHHHHhcCCCEEEEccCchHHH-------------
Confidence 9999999999999999985559999999999999999999999999999999999999999987632
Q ss_pred HHHHHHHH-----------H---------HHHHHHHHCCCCCHHHHHHHHhhhHHHHHHhCCCCCCCCCCCCCCCCCCCC
Q 007089 167 AAADAIKA-----------A---------IHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDV 226 (618)
Q Consensus 167 a~~~al~a-----------~---------~~l~~av~~G~i~~~~ld~av~RiL~~k~~lGl~~~~p~~~~~~~~~~~~~ 226 (618)
+.+|++| . +.|.+||++|+|+++|||+||+|||++|+++|+|+ +|. + ...+
T Consensus 249 -~~~al~AG~D~~m~~~~~~~~~~~~~~~~~l~~av~~G~i~~~~id~av~Ril~~k~~~gl~~-~~~--~-----~~~~ 319 (721)
T 2x41_A 249 -PVEQLKAGNDLIMPGKAYQVNTERRDEIEEIMEALKEGKLSEEVLDECVRNILKVLVNAPSFK-NYR--Y-----SNKP 319 (721)
T ss_dssp -HHHHHHHTCCBBCSCCGGGTCTTCCCHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHTTSGGGG-TCC--C-----CSCC
T ss_pred -HHHHHHcCCCcccCCCcccccchhHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHhCCCC-CCC--c-----cccc
Confidence 3444554 2 77999999999999999999999999999999998 442 1 2346
Q ss_pred CCHHHHHHHHHHHhhcceeccCCCCCCCCCCCCCcEEEEEccCCCccccccc-cccccCCCcCCHHHHHHhh-hh-----
Q 007089 227 CTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIG-NYAGVACGYTTPLQGISRY-AK----- 299 (618)
Q Consensus 227 ~~~~~~~la~~~A~esivLLKN~~~~LPL~~~~~~kIaviGp~a~~~~~~~G-~~~g~~~~~~t~~~~l~~~-~~----- 299 (618)
++++|+++++++|+||||||||++ +|||++. +||+||||+++....+++ ++...+.+.++++++|+++ ..
T Consensus 320 ~~~~h~~la~~~A~esiVLLKN~~-~LPL~~~--~kIaviG~~A~~~~~~g~gs~~~~~~~~vt~~~gl~~~G~~~~~~~ 396 (721)
T 2x41_A 320 DLEKHAKVAYEAGAEGVVLLRNEE-ALPLSEN--SKIALFGTGQIETIKGGTGSGDTHPRYAISILEGIKERGLNFDEEL 396 (721)
T ss_dssp CHHHHHHHHHHHHHHHCEEEEESS-CCSCCTT--CCEEEESGGGTSCCCSCBSTTCCCCSCCCCHHHHHHHTTCCBCHHH
T ss_pred CCHHHHHHHHHHHHhchhhhcCCC-cCCCCCC--CEEEEEecCCcCccccCCCCCCcCcCCCCCHHHHHHHhccCCCCce
Confidence 789999999999999999999998 9999864 799999999988765432 2334567789999999987 32
Q ss_pred -eeee-------------cc---cccc--ccCCccch--HHHHHHhhcCCEEEEEecCCcccccccCCCC----CCCCCh
Q 007089 300 -TIHQ-------------AG---CFGV--ACNGNQLI--GAAEVAARQADATVLVMGLDQSIEAEFIDRA----GLLLPG 354 (618)
Q Consensus 300 -~~y~-------------~g---~~~~--~~~~~~~~--~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~----~l~Lp~ 354 (618)
+.|. .| +... ...+...+ ++++++|+.+|++||++|.+ ++|+.||. +|.||.
T Consensus 397 ~v~y~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~a~~~a~~aDvvIv~vg~~---~gEg~Dr~~~~~~l~Lp~ 473 (721)
T 2x41_A 397 AKTYEDYIKKMRETEEYKPRRDSWGTIIKPKLPENFLSEKEIHKLAKKNDVAVIVISRI---SGEGYDRKPVKGDFYLSD 473 (721)
T ss_dssp HHHHHHHHHHHHHSTTTSCBC-----CBCCCCCSCCSCHHHHHHHHHHCSEEEEEEECC---CBTTCCCCSSBTTTBCCH
T ss_pred EEEEeecccccccccccCCCccceeccccCCCchhhhcHHHHHHHHhcCCEEEEEEecc---ccccccccCCCCCccCCH
Confidence 3455 44 3110 11223455 78899999999999999976 78999999 999999
Q ss_pred hHHHHHHHHH----HhcCCCEEEEEEcCceeec-ccccCCCCccEEEEccCCCcchhHHHHHHHcCCCCCCcccCcccCC
Q 007089 355 RQQELVSRVA----KASRGPVVLVLMCGGPVDV-SFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPGGKLPMTWYP 429 (618)
Q Consensus 355 ~q~~Li~~v~----~~~~k~vVvVl~~g~P~~l-~~~~~~~~v~AiL~a~~~G~e~g~AlAdVL~G~~nPsGkLPvT~~p 429 (618)
.|.+||++|+ + .++|+|||+++|+|++| +|. ++++|||++|+||+++|+|+||||||++|||||||+|| |
T Consensus 474 ~q~~LI~~v~~~~~~-~~~~vVVVl~~g~P~~l~~~~---~~v~AiL~a~~pG~egg~AlAdVL~G~vnPSGkLPvT~-p 548 (721)
T 2x41_A 474 DETDLIKTVSREFHE-QGKKVIVLLNIGSPVEVVSWR---DLVDGILLVWQAGQETGRIVADVLTGRINPSGKLPTTF-P 548 (721)
T ss_dssp HHHHHHHHHHHHHHH-TTCCEEEEEECSSCCCCTTTG---GGCSEEEECCCCGGGHHHHHHHHHHTSSCCCCCCSSCE-E
T ss_pred HHHHHHHHHHHHHHH-hCCCEEEEEecCCceEccchh---hcCCEEEEcCCCchhHHHHHHHHHcCCCCCCCCCceee-c
Confidence 9999999998 6 46799999999999999 665 57999999999999999999999999999999999997 8
Q ss_pred ccccCCCCCcccccccc-----CCCCC---CccccCC---CCcccccCcCCCCCCceecCCccCCCcccccccccccccc
Q 007089 430 QDYVSRLPMTDMRMRAA-----RGYPG---RTYRFYK---GPVVFPFGHGMSYTTFAHTLSKAPNQFSVPIATSLYAFKN 498 (618)
Q Consensus 430 ~~~~~~~p~~~~~~~~~-----~~~~~---~~Yr~~~---~~~~ypFG~GLSYTtF~ys~~~~~~~~~~~~~~~~~~~~~ 498 (618)
++. +++|..++...+. ..|.+ .+||||| .+|+||||||||||||+||+++++.
T Consensus 549 ~~~-~~~p~~~~~~~~~~~~~~~~y~eg~~vgYry~d~~~~~plypFG~GLSYTtF~ys~~~~~~--------------- 612 (721)
T 2x41_A 549 RDY-SDVPSWTFPGEPKDNPQKVVYEEDIYVGYRYYDTFGVEPAYEFGYGLSYTTFEYSDLNVSF--------------- 612 (721)
T ss_dssp SSG-GGCSCTTTTCBSTTSCSEEECTTTTCCTHHHHHHHTCCEEECTTCCBCSSCEEEEEEEEEE---------------
T ss_pred Ccc-ccCccccCCCCCccccccccccCCcccccceeecCCCceeeccCCCCCcceeEeeceEeec---------------
Confidence 887 7888722221111 12332 3799997 4799999999999999999987521
Q ss_pred cccccccccccccCCCCCeeEEEEEEEEeCCCCCcceEEEEeeeCCCCC-CCCcccccccccc-ccCCCCeEEEEEEecc
Q 007089 499 TTISSNAIRVAHTNCNDAMSLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKV-HVTAGALQSVRLDIHV 576 (618)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~v~v~VtNtG~~~G~evvQlY~~~~~~~-~~P~k~L~gF~kv-~l~pGes~~V~~~l~~ 576 (618)
. +. .++|+|+|||||+++|+||||||+++|.+. .+|.|+||||+|| .|+||||++|+|+|++
T Consensus 613 ----------~-----~~-~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~~L~pGes~~V~~~l~~ 676 (721)
T 2x41_A 613 ----------D-----GE-TLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLLNPGESEEVVLEIPV 676 (721)
T ss_dssp ----------C-----SS-EEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEEEEECCCBCTTCEEEEEEEEEG
T ss_pred ----------C-----CC-eEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhcccccccCCCCCeEEEEEEECH
Confidence 0 11 699999999999999999999999999876 8999999999999 9999999999999999
Q ss_pred CCceeEEeCCCCEEecCceEEEEEeCCCCeEEEEEEE
Q 007089 577 CKHLSVVDKFGIRRIPMGEHSLHIGDLKHSISLQANL 613 (618)
Q Consensus 577 ~~~ls~~d~~~~~~~~~G~y~i~vG~ss~~~~~~~~~ 613 (618)
++|++|| .++|++|+|+|+|+||.||++++++..+
T Consensus 677 -~~l~~~d-~~~~~~e~G~y~v~vG~ss~d~~~~~~~ 711 (721)
T 2x41_A 677 -RDLASFN-GEEWVVEAGEYEVRVGASSRNIKLKGTF 711 (721)
T ss_dssp -GGGCEEC-SSCEEECCEEEEEEEEEETTEEEEEEEE
T ss_pred -HHhcEEc-CCeEEEeCceEEEEEECCCCCcceEEEE
Confidence 9999999 9999999999999999999999775443
No 4
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A
Probab=100.00 E-value=2.6e-98 Score=855.71 Aligned_cols=421 Identities=26% Similarity=0.406 Sum_probs=355.3
Q ss_pred cceE-eCccccccCCCCCCccccccCCCHHHHHHHHHHHHHHHhcCC----CCCCeEEEeecccccccCCCCCCCCcccc
Q 007089 8 GLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNT----GSRLKVAACCKHYTAYDLDNWNGVDRYHF 82 (618)
Q Consensus 8 Gi~~-laP~~di~r~p~~gR~~e~fgeDP~l~~~~a~a~v~Glq~~~----~~~~~v~a~~KHF~g~g~~~~~~~~r~~~ 82 (618)
|||+ |+|++||.|||+|||++|||||||+|+++|+.|||+|||+.. .+..||+||+|||||||... .+|+..
T Consensus 154 Gin~~~aPvvDv~rdPr~GR~~EsfGEDP~lv~~~a~A~V~GlQ~~~~~~~~~~~gV~a~~KHFpG~G~~~---~~r~~~ 230 (822)
T 3rrx_A 154 GIEWSFAPTVAVVRDDRWGRTYESYSEDPDLVKRYAGEMVTGIQGDVGADFLKGSNRIATAKHFVGDGGTE---RGVDRG 230 (822)
T ss_dssp TCCEEEEEECCCCSCTTSTTGGGSSCSCHHHHHHHHHHHHHHHHCCSSTTTTCTTCCEEEEEEESCGGGBG---GGCTTC
T ss_pred CCcEeeccccccccCCCcCccccCCCCCHHHHHHHHHHHHHHHhcccccccccCCCeEEEeeeccCCCccc---cCccCc
Confidence 9999 999999999999999999999999999999999999999851 12337999999999998532 245556
Q ss_pred ccccCHHHHHHhhcHHHHHHHHcCCCceEEecccCCCCcccccCHHHHHHHHHhhcCCCcEEEccchhhhhccccccccC
Q 007089 83 NARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTR 162 (618)
Q Consensus 83 ~~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~lLR~e~gf~G~ViSD~~~~~~~~~~~~~~~ 162 (618)
++.+++++|+|+||+||+++|++| +.+||||||.+||+|+|.|++||++|||+||||+|+|||||++|+.+...
T Consensus 231 ~~~vs~~~L~e~~L~PF~~aI~ag-~~sVM~syn~vng~pa~~s~~lLtdlLR~e~GF~G~VvSD~~~~~~i~~~----- 304 (822)
T 3rrx_A 231 NTLIDEKGLRDIHSAGYFSAINQG-VQSVMASFNSWNGKRVHGDKHLLTDVLKNQLGFDGFVVSDWNAHKFVEGC----- 304 (822)
T ss_dssp EECCCHHHHHHTTSHHHHHHHHTT-CSEEEECSSEETTEEGGGCHHHHTCCCCCCSCCCSEEECCTTGGGGSTTC-----
T ss_pred cCcCCHHHHHHHhhHHHHHHHHcC-CCEEEeccccCCCccccCCHHHHHHHHHHhcCCCeEEecccchhhhhcCC-----
Confidence 778999999999999999999877 99999999999999999999999999999999999999999999876431
Q ss_pred CHHHHHHHHHHH--------------HHHHHHHHHCCCCCHHHHHHHHhhhHHHHHHhCCCCCCCCCC--CCCCCCCCCC
Q 007089 163 TPEEAAADAIKA--------------AIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQ--PFGNLGPRDV 226 (618)
Q Consensus 163 ~~~~a~~~al~a--------------~~~l~~av~~G~i~~~~ld~av~RiL~~k~~lGl~~~~p~~~--~~~~~~~~~~ 226 (618)
..+++.+|++| .+.|.+||++|+|+++|||+||+|||++|+++|||+ +|+.. ++.. ....+
T Consensus 305 -~~ea~~~Al~AG~Dm~m~~~~~~~~~~~l~~aV~~G~i~e~rID~av~RIL~~K~~lGLfd-~p~~~~~~~~~-~~~~v 381 (822)
T 3rrx_A 305 -DLEQCAQAINAGVDVIMVPEHFEAFYHNTVKQVKAGVIAESRINDAVRRFLRAKIRWGVFT-KSKPSARPESQ-HPQWL 381 (822)
T ss_dssp -BTTBCHHHHHHTCCBEECTTTHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHTTTT-SCCGGGSGGGS-CGGGT
T ss_pred -hHHHHHHHHHcCCCEECCCccHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCC-CCCcccccccc-ccccc
Confidence 23455677777 457899999999999999999999999999999999 55421 1111 12457
Q ss_pred CCHHHHHHHHHHHhhcceeccCCCCCCCCCCCCCcEEEEEccCCCcccccccccc----c------cCCCcCCHHHHHHh
Q 007089 227 CTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYA----G------VACGYTTPLQGISR 296 (618)
Q Consensus 227 ~~~~~~~la~~~A~esivLLKN~~~~LPL~~~~~~kIaviGp~a~~~~~~~G~~~----g------~~~~~~t~~~~l~~ 296 (618)
++++|+++|+++|+||||||||++++|||++. +||+||||+|+....+.|+|+ | ..++.+|++++|++
T Consensus 382 ~~~eh~~lAre~A~eSiVLLKN~~~~LPL~~~--~~IaViGp~A~~~~~~~Ggws~~~~G~gs~~~~~~~~~t~l~gi~~ 459 (822)
T 3rrx_A 382 GAAEHRTLAREAVRKSLVLLKNNESILPIKAS--SRILVAGKGANAINMQAGGWSVSWQGTDNTNSDFPNATSIFSGLQS 459 (822)
T ss_dssp TCHHHHHHHHHHHHHHCEEEEEGGGCCSBCTT--SEEEEESTTTTCHHHHHCSSSSSSSCTTCCGGGSTTCBCHHHHHHH
T ss_pred CCHHHHHHHHHHHHhceEEEecCCCccCCCCC--CeEEEEcCCccchhhccCCcceeccccCCCcCCCCCCCCHHHHHHH
Confidence 89999999999999999999999999999864 699999999998766666653 1 13467899999998
Q ss_pred hhh-----eeeeccccccccCCccchHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCC---hhHHHHHHHHHHhcC
Q 007089 297 YAK-----TIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLP---GRQQELVSRVAKASR 368 (618)
Q Consensus 297 ~~~-----~~y~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp---~~q~~Li~~v~~~~~ 368 (618)
+.. +.|... .+.++++|++||++|+++..|++| ||.+|.|| +.|.+||++|++ .+
T Consensus 460 ~~~~~~~~v~~~~~---------------~~~a~~aDv~Iv~~Ge~~~~e~~g-Dr~~L~lp~g~~~q~~Li~av~a-~g 522 (822)
T 3rrx_A 460 QVTKAGGKITLSES---------------GEYTSKPDVAIVVIGEEPYAEWFG-DIELLEFQHETKHALALLKQLKA-DN 522 (822)
T ss_dssp HHHHTTCEEEECTT---------------CCCSSCCSEEEEEEECCCCCGGGG-CCSCCBTTTTTCHHHHHHHHHHH-TT
T ss_pred HHHhcCCeEEEccc---------------ccccccCCeEEEEecCCcccccCC-CcccccCCCCChHHHHHHHHHHH-hC
Confidence 753 122110 024688999999999987777766 99999999 679999999987 57
Q ss_pred CCEEEEEEcCceeecccccCCCCccEEEEccCCCcchhHHHHHHHcCCC------CCCcccCcccCCccccCCCCCcccc
Q 007089 369 GPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRA------NPGGKLPMTWYPQDYVSRLPMTDMR 442 (618)
Q Consensus 369 k~vVvVl~~g~P~~l~~~~~~~~v~AiL~a~~~G~e~g~AlAdVL~G~~------nPsGkLPvT~~p~~~~~~~p~~~~~ 442 (618)
+|||||+++|+|+.|.|+. ++++|||++||||++++ ||||||||++ |||||||+|| |++. +|+|...
T Consensus 523 ~pvVvVl~sGrP~~l~~~~--~~~~Ail~aw~pG~eGg-AiAdVLfG~v~g~~~~nPSGkLP~T~-P~~~-~q~P~~~-- 595 (822)
T 3rrx_A 523 IPVVTVFLSGRPLWVNKEL--NASDAFVAAWLPGSEGE-GVADVLLTNKQGKTQFDFTGKLSFSW-PKYD-DQFTLNL-- 595 (822)
T ss_dssp CCEEEEEECSSCCBCHHHH--HTCSEEEEEECCCSBTH-HHHHHHBBCTTSCBSCCCCCCCSSCB-CSST-TCTTCCT--
T ss_pred CCEEEEEeCCcceeccchh--hhCCeEEEcCCCCchhH-HHHHHHhcccccccccCCCCCCceec-cCCc-ccCCccc--
Confidence 8999999999999996543 47999999999999986 9999999997 9999999997 9987 8899521
Q ss_pred ccccCCCCCCccccCCCCcccccCcCCCCCCceecC
Q 007089 443 MRAARGYPGRTYRFYKGPVVFPFGHGMSYTTFAHTL 478 (618)
Q Consensus 443 ~~~~~~~~~~~Yr~~~~~~~ypFG~GLSYTtF~ys~ 478 (618)
. +.+| +|+||||||||||||+|..
T Consensus 596 -------~---~~~~--~PlypFG~GLSYt~f~~~~ 619 (822)
T 3rrx_A 596 -------N---DADY--DPLFAYGYGLTYQDNINVP 619 (822)
T ss_dssp -------T---CSSC--CCSBCTTCCBCTTCCCCCC
T ss_pred -------C---CCCC--ccccCCCCCcCCCCCcccc
Confidence 0 1122 7999999999999999864
No 5
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A*
Probab=100.00 E-value=5.3e-97 Score=833.59 Aligned_cols=421 Identities=25% Similarity=0.406 Sum_probs=361.6
Q ss_pred cceE-eCccccccCCCCCCccccccCCCHHHHHHHHHHHHHHHhcCCCC-----------CCeEEEeecccccccCCCCC
Q 007089 8 GLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGS-----------RLKVAACCKHYTAYDLDNWN 75 (618)
Q Consensus 8 Gi~~-laP~~di~r~p~~gR~~e~fgeDP~l~~~~a~a~v~Glq~~~~~-----------~~~v~a~~KHF~g~g~~~~~ 75 (618)
|+|+ |+|++||.|||+|||++|||||||+|+++|+. +|+|||+.... ..||+||+|||||||.+..
T Consensus 139 Gi~~~~aP~vdv~r~p~~GR~~esfgeDP~lv~~~a~-~v~GlQ~~~~~~~~~~~~~~~~~~gV~a~~KHFpg~g~~~~- 216 (602)
T 1x38_A 139 GIQYAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTE-LIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVD- 216 (602)
T ss_dssp TCCEECCCBCCCCSCTTSTTGGGSSCSSHHHHHHGGG-HHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCGG-
T ss_pred CCCEEeeceeccccCCCcCccccCcCCCHHHHHHHHH-HHHHhcCCCccccccccccccccCCeEEEeccccCCCcccc-
Confidence 9999 99999999999999999999999999999999 99999993210 1389999999999997541
Q ss_pred CCCccccccccCHHHHHHhhcHHHHHHHHcCCCceEEecccCCCCcccccCHHHHHHHHHhhcCCCcEEEccchhhhhcc
Q 007089 76 GVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLY 155 (618)
Q Consensus 76 ~~~r~~~~~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~lLR~e~gf~G~ViSD~~~~~~~~ 155 (618)
++...++.+++++|+|+||+||+++|++| +.+||||||.+||+|||+|+++|+++||+||||+|+|||||++|+++.
T Consensus 217 --~~~~~~~~~~~~~l~e~~l~pF~~ai~ag-~~~vM~sy~~v~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~~~~ 293 (602)
T 1x38_A 217 --GINENNTIINREGLMNIHMPAYKNAMDKG-VSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRIT 293 (602)
T ss_dssp --GCTTCEECCCHHHHHHHTSHHHHHHHHTT-CCEEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGS
T ss_pred --CcccccCcCCHHHHHHHHHHHHHHHHHcC-CCEEEecccccCCccccCCHHHHHHHhhcccCCCeEEEccchHHHHHH
Confidence 34445678999999999999999999986 999999999999999999999999999999999999999999999886
Q ss_pred ccccccCCHHHHHHHHHHH--------------HHHHHHHHHCCCCCHHHHHHHHhhhHHHHHHhCCCCCCCCCCCCCCC
Q 007089 156 NTQHYTRTPEEAAADAIKA--------------AIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNL 221 (618)
Q Consensus 156 ~~~~~~~~~~~a~~~al~a--------------~~~l~~av~~G~i~~~~ld~av~RiL~~k~~lGl~~~~p~~~~~~~~ 221 (618)
..++ .+..+++.+|++| .+.|.+||++|+|+++|||+||+|||++|+++|+|+ +|+..+ .
T Consensus 294 ~~~~--~~~~~a~~~al~AG~D~~m~~~~~~~~~~~l~~av~~G~i~~~~id~av~RiL~~k~~~glf~-~p~~~~--~- 367 (602)
T 1x38_A 294 TPAG--SDYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFE-NPYADP--A- 367 (602)
T ss_dssp SSTT--TTHHHHHHHHHHHTCCBEECCSCHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTT-CCSCCG--G-
T ss_pred hhcC--CCHHHHHHHHHHcCCCcccCCcchhhHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhCCCC-CCCCCc--c-
Confidence 5443 4788999999998 367999999999999999999999999999999999 665321 1
Q ss_pred CCCCCCCHHHHHHHHHHHhhcceeccCCC--C---CCCCCCCCCcEEEEEccCCCcccccccccc-------ccCCCcCC
Q 007089 222 GPRDVCTPAHQQLALQAAHQGIVLLKNSA--R---TLPLSTLRHHTVAVIGPNSDVTVTMIGNYA-------GVACGYTT 289 (618)
Q Consensus 222 ~~~~~~~~~~~~la~~~A~esivLLKN~~--~---~LPL~~~~~~kIaviGp~a~~~~~~~G~~~-------g~~~~~~t 289 (618)
....+++++|+++++++|+||||||||++ + +|||+++ .+||+||||+++....++|+|+ +.+....+
T Consensus 368 ~~~~~~~~~~~~la~~~a~~sivLLKN~~~~~~~~~LPL~~~-~~~iaviG~~A~~~~~~~gg~~~~~~g~~~~~~~~~t 446 (602)
T 1x38_A 368 MAEQLGKQEHRDLAREAARKSLVLLKNGKTSTDAPLLPLPKK-APKILVAGSHADNLGYQCGGWTIEWQGDTGRTTVGTT 446 (602)
T ss_dssp GGGGTTCHHHHHHHHHHHHHHCEEEEECSSTTSCCCCSCCSC-CSEEEEESTTTTCHHHHHCSSSSSTTCCSSCCSSCBC
T ss_pred hhhccCCHHHHHHHHHHHHhceEEeccCCCCCcccccccCCC-CCEEEEEcCCCccccccCCcceeeccCCCCCCCCccc
Confidence 12357899999999999999999999997 5 9999864 4799999999998655555543 22455689
Q ss_pred HHHHHHhhh----heeeeccccccccCCccchHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHH
Q 007089 290 PLQGISRYA----KTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK 365 (618)
Q Consensus 290 ~~~~l~~~~----~~~y~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~ 365 (618)
++++|+++. .+.|..++. .++. .|+++|++||++|.++..++|| ||.+|.||..|.+||+++++
T Consensus 447 ~~~~l~~~~~~~~~v~~~~~~~----------~~~~-~a~~aD~viv~~g~~~~~e~~g-dr~~l~lp~~q~~li~~v~~ 514 (602)
T 1x38_A 447 ILEAVKAAVDPSTVVVFAENPD----------AEFV-KSGGFSYAIVAVGEHPYTETKG-DNLNLTIPEPGLSTVQAVCG 514 (602)
T ss_dssp HHHHHHHHSCTTCEEEEESSCC----------HHHH-HHTTCSCEEEEEECCCCCGGGG-CCSSCCCCSSSHHHHHHHHT
T ss_pred HHHHHHHHhCCCeEEEEcCCCC----------HHHH-HHhhCCEEEEEeccCcccccCC-CcCCcCCChhHHHHHHHHHh
Confidence 999999863 245555431 1223 3889999999999888788888 99999999999999999986
Q ss_pred hcCCCEEEEEEcCceeecccccCCCCccEEEEccCCCcchhHHHHHHHcCCCCCCcccCcccCCccccCCCCCccccccc
Q 007089 366 ASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPGGKLPMTWYPQDYVSRLPMTDMRMRA 445 (618)
Q Consensus 366 ~~~k~vVvVl~~g~P~~l~~~~~~~~v~AiL~a~~~G~e~g~AlAdVL~G~~nPsGkLPvT~~p~~~~~~~p~~~~~~~~ 445 (618)
++|+|||+++|+|++|.++. ++++|||++|+||+++ +|+||||||++|||||||+|| |++. +++|.+
T Consensus 515 --~~~~VvVl~~g~P~~l~~~~--~~~~Ail~a~~pG~~g-~AiadvL~G~~nPsGkLP~t~-p~~~-~~~p~~------ 581 (602)
T 1x38_A 515 --GVRCATVLISGRPVVVQPLL--AASDALVAAWLPGSEG-QGVTDALFGDFGFTGRLPRTW-FKSV-DQLPMN------ 581 (602)
T ss_dssp --TSCEEEEEECSSCCCCHHHH--HHCSEEEEEECCCSBT-HHHHHHHTTSSCCCCCCSSCB-CSCG-GGCSCC------
T ss_pred --CCCEEEEEeCCCceeccchh--hccCeEEeccCCchHH-HHHHHHHcCCCCCCccCcccc-cCcc-ccCCcc------
Confidence 67999999999999996442 5899999999999997 999999999999999999997 8876 778842
Q ss_pred cCCCCCCccccCCCCcccccCcCCCCCC
Q 007089 446 ARGYPGRTYRFYKGPVVFPFGHGMSYTT 473 (618)
Q Consensus 446 ~~~~~~~~Yr~~~~~~~ypFG~GLSYTt 473 (618)
.+||||+ |+||||||||||+
T Consensus 582 ------~g~~~~~--plypFG~GLSYt~ 601 (602)
T 1x38_A 582 ------VGDAHYD--PLFRLGYGLTTNA 601 (602)
T ss_dssp ------TTCSSCC--CSBCTTCCBCCCC
T ss_pred ------CCCCCCC--ccCcCCCCcCCCC
Confidence 1388885 9999999999996
No 6
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A*
Probab=100.00 E-value=1.1e-86 Score=753.90 Aligned_cols=404 Identities=20% Similarity=0.267 Sum_probs=330.0
Q ss_pred cceE-eCccccccCCCCCCc-cccccCCCHHHHHHHHHHHHHHHhcCCCCCCeEEEeecccccccCC---CCCCCCcccc
Q 007089 8 GLTY-WSPNVNIFRDPRWGR-GQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLD---NWNGVDRYHF 82 (618)
Q Consensus 8 Gi~~-laP~~di~r~p~~gR-~~e~fgeDP~l~~~~a~a~v~Glq~~~~~~~~v~a~~KHF~g~g~~---~~~~~~r~~~ 82 (618)
|+|+ |+|++||.|||+||| ++|||||||+|+++|+.|+|+|||++ ||+||+|||||||.. +|.+.+
T Consensus 168 Gi~~~~aPvvDv~r~p~~grig~rsfgeDP~lv~~~a~a~v~Glq~~-----gV~a~~KHFpg~g~~~~dsh~~~~---- 238 (642)
T 3bmx_A 168 GINTDFSPVVDINNNPDNPVIGVRSFSSNRELTSRLGLYTMKGLQRQ-----DIASALKHFPGHGDTDVDSHYGLP---- 238 (642)
T ss_dssp TCCEECCCBCCCCCCTTCSSSGGGSSCSSHHHHHHHHHHHHHHHHHT-----TCEEEEEEETCCTTCSSCTTTSCC----
T ss_pred CCCEEECCccccCCCCCCCcccccccCCCHHHHHHHHHHHHHHHHhC-----CceEEeccccCCCCccCCCCCCCc----
Confidence 9999 999999999999997 79999999999999999999999998 799999999999853 333333
Q ss_pred ccccCHHHHHHhhcHHHHHHHHcCCCceEEec---ccCCC-------------CcccccCHHHHHHHHHhhcCCCcEEEc
Q 007089 83 NARVSKQDLEDTYNVPFKACVVEGKVASVMCS---YNQVN-------------GKPTCADPDILKNTIHGQWRLDGYIVS 146 (618)
Q Consensus 83 ~~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~s---y~~vn-------------g~pa~~s~~ll~~lLR~e~gf~G~ViS 146 (618)
.+.+++++|+|+||+||+++|++| +.+|||| ||.+| |+|||+|+++|++|||+||||+|+|||
T Consensus 239 ~~~~~~~~l~e~~l~PF~~ai~ag-~~~VM~ah~~y~~id~~~~~~~~~g~~~g~pa~~s~~ll~~lLR~e~GF~G~VvS 317 (642)
T 3bmx_A 239 LVSHGQERLREVELYPFQKAIDAG-ADMVMTAHVQFPAFDDTTYKSKLDGSDILVPATLSKKVMTGLLRQEMGFNGVIVT 317 (642)
T ss_dssp BCCCCHHHHHHTTHHHHHHHHHTT-CCEEEECCCBCTTTCCCEEECTTTSCEEECBGGGCHHHHCCCCCCCSCCCSEEEC
T ss_pred eeccCHHHHhhhhHHHHHHHHHcC-CCEEEEccccccccCccccccccccccCcccccCCHHHHHHHhhCcCCCCEEEEe
Confidence 345699999999999999999977 8999999 66777 789999999999999999999999999
Q ss_pred cchhhhhccccccccCCHHHHHHHHHHH-------H----------------HHHHHHHHCCCCCHHHHHHHHhhhHHHH
Q 007089 147 DCDSVGVLYNTQHYTRTPEEAAADAIKA-------A----------------IHTEGAVRGGLLREEDVNLALAYTITVQ 203 (618)
Q Consensus 147 D~~~~~~~~~~~~~~~~~~~a~~~al~a-------~----------------~~l~~av~~G~i~~~~ld~av~RiL~~k 203 (618)
||++|+++... .+..+++.+|++| . +.|.+||++|+|+++|||+||+|||++|
T Consensus 318 D~~~m~ai~~~----~~~~~a~~~Al~AG~D~~l~~~~~~~~~~~~~~~~~~~~l~~av~~G~i~~~~id~av~RiL~~k 393 (642)
T 3bmx_A 318 DALNMKAIADH----FGQEEAVVMAVKAGVDIALMPASVTSLKEEQKFARVIQALKEAVKNGDIPEQQINNSVERIISLK 393 (642)
T ss_dssp SCTTSHHHHTT----SCHHHHHHHHHHHTCSBEESCSCCCSGGGTHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred CchhhHHHHhc----CCHHHHHHHHHHcCCCEecccccccccccchhHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHH
Confidence 99999988652 3678888999988 1 2588999999999999999999999999
Q ss_pred HHhCCCCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHhhcceeccCCCCCCCCCCCCCcEEEEEccCCCcccccccccc
Q 007089 204 MRLGMFDGEPSAQPFG--NLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYA 281 (618)
Q Consensus 204 ~~lGl~~~~p~~~~~~--~~~~~~~~~~~~~~la~~~A~esivLLKN~~~~LPL~~~~~~kIaviGp~a~~~~~~~G~~~ 281 (618)
+++|+|+..|+..... ......+++++|+++++++|++|||||||++++|||++++.+||+|+||++..
T Consensus 394 ~~~gl~~~~p~~~~~~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~~~~~~iaviG~~~~~--------- 464 (642)
T 3bmx_A 394 IKRGMYPARNSDSTKEKIAKAKKIVGSKQHLKAEKKLAEKAVTVLKNEQHTLPFKPKKGSRILIVAPYEEQ--------- 464 (642)
T ss_dssp HHTTCSSCCCCCCHHHHHHHHHHHTTCHHHHHHHHHHHHHHCEEEEEGGGCCSCCCCTTCEEEEEESSHHH---------
T ss_pred HHcCCCcCCCCcccccchhhhhhhcCCHHHHHHHHHHHHhCEEEEccCCCcCCCCCCCCCEEEEEeCCccc---------
Confidence 9999999325421000 00013467999999999999999999999999999986556899999987421
Q ss_pred ccCCCcCCHHHHHHhhh---heeeeccccccccCCccchHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhH--
Q 007089 282 GVACGYTTPLQGISRYA---KTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ-- 356 (618)
Q Consensus 282 g~~~~~~t~~~~l~~~~---~~~y~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q-- 356 (618)
..+++++|+++. ...+..++.. .......+++++++++.+|++||+++.......| ++.+|..|
T Consensus 465 -----~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~a~~aDvvIv~~~~~~~~~~e-----~~~l~~~q~~ 533 (642)
T 3bmx_A 465 -----TASIEQTIHDLIKRKKIKPVSLSKM-NFASQVFKTEHEKQVKEADYIITGSYVVKNDPVV-----NDGVIDDTIS 533 (642)
T ss_dssp -----HHHHHHHHHHHHHTTSSCCCEEEEE-ECTTCCCCHHHHHHHHHCSEEEEEECCSSCCCCE-----ETTEECCCCC
T ss_pred -----hhhHHHHHHHhhCCCCeeEEeccCC-CCcchhhHHHHHHHHhhCCEEEEEecCCCCCchh-----ccCCcccccc
Confidence 347789998875 2333333211 1111245788999999999999966532111122 34567777
Q ss_pred ----------HHHHHHHHHhcCCCEEEEEEcCceeecccccCCCCccEEEEccCC--------CcchhHHHHHHHcCCCC
Q 007089 357 ----------QELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYP--------GQAGGAAIADVLFGRAN 418 (618)
Q Consensus 357 ----------~~Li~~v~~~~~k~vVvVl~~g~P~~l~~~~~~~~v~AiL~a~~~--------G~e~g~AlAdVL~G~~n 418 (618)
.+||+++++ .++|+|||+ .|+||+|+|+ ++++|||++|++ |+++|+|+||||||++|
T Consensus 534 ~~~~~~~~~~~~li~~~~~-~~~pvVvv~-~g~P~~l~~~---~~~~Ail~a~~~~G~~~g~~g~~~g~AiadvLfG~~n 608 (642)
T 3bmx_A 534 DSSKWATVFPRAVMKAALQ-HNKPFVLMS-LRNPYDAANF---EEAKALIAVYGFKGYANGRYLQPNIPAGVMAIFGQAK 608 (642)
T ss_dssp SSTTHHHHHHHHHHHHHHH-TTCCEEEEE-CSCGGGGGGC---TTCSEEEECSCCCCEETTEESCSHHHHHHHHHTTSSC
T ss_pred ccccccchhHHHHHHHHHH-cCCCEEEEe-cCChhccccc---cccCeEEEEccCcccccccccchHHHHHHHHHcCCCC
Confidence 899999986 678988776 4899999987 469999999999 79999999999999999
Q ss_pred CCcccCcccCCccccCCCCCccccccccCCCCCCccccCCCCcccccCcCCCCCCce
Q 007089 419 PGGKLPMTWYPQDYVSRLPMTDMRMRAARGYPGRTYRFYKGPVVFPFGHGMSYTTFA 475 (618)
Q Consensus 419 PsGkLPvT~~p~~~~~~~p~~~~~~~~~~~~~~~~Yr~~~~~~~ypFG~GLSYTtF~ 475 (618)
||||||+|| |++. .| .+|+||||||||||||.
T Consensus 609 PsGkLPvt~-p~~~---~~---------------------~~plfpfG~GLsYt~~~ 640 (642)
T 3bmx_A 609 PKGTLPVDI-PSVT---KP---------------------GNTLYPLGYGLNIKTGR 640 (642)
T ss_dssp CCCCCSSCE-ECSS---ST---------------------TSEEECTTCCBCTTTCS
T ss_pred CCccCceee-eccC---CC---------------------CCcccCCCCCccCCCCC
Confidence 999999997 6542 11 26999999999999984
No 7
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A*
Probab=100.00 E-value=2.2e-61 Score=528.82 Aligned_cols=351 Identities=17% Similarity=0.186 Sum_probs=265.2
Q ss_pred cceE-eCccccccCCCCCC-ccccccCCCHHHHHHHHHHHHHHHhcCCCCCCeEEEeecccccccCC---CCCCCCcccc
Q 007089 8 GLTY-WSPNVNIFRDPRWG-RGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLD---NWNGVDRYHF 82 (618)
Q Consensus 8 Gi~~-laP~~di~r~p~~g-R~~e~fgeDP~l~~~~a~a~v~Glq~~~~~~~~v~a~~KHF~g~g~~---~~~~~~r~~~ 82 (618)
|+|+ |+|++||.|||+|| |++|||||||+++++|+.|||+|||+. ||+||+|||||||.+ +|.+.+
T Consensus 142 Gin~~fAPvvDv~r~P~~g~ig~rsfGEDP~lv~~~a~A~v~GlQ~~-----gV~a~~KHFpG~G~~~~Dsh~~~~---- 212 (535)
T 3sql_A 142 GINWVLAPVLDVNNNPHNPVINIRAFGETPDQVSALGTAFIRGAQQY-----AVLTTAKHFPGHGDTATDSHLALP---- 212 (535)
T ss_dssp TCCEECCCBCCCCCCTTCSSSGGGSSCSSHHHHHHHHHHHHHHHTTS-----SCBCEEEEETCCCSCSCCTTTSCC----
T ss_pred CCCEEecCeeccCCCCCCCCccccCCCCCHHHHHHHHHHHHHHHhhc-----ccceeeeeecccCCcccCCccCCC----
Confidence 9999 99999999999999 789999999999999999999999998 799999999999854 333222
Q ss_pred ccccCHHHHHHhhcHHHHHHHHcCCCceEEecccCCC----CcccccCHHHHHHHHHhhcCCCcEEEccchhhhhccccc
Q 007089 83 NARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVN----GKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQ 158 (618)
Q Consensus 83 ~~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vn----g~pa~~s~~ll~~lLR~e~gf~G~ViSD~~~~~~~~~~~ 158 (618)
.++.++++|+|+||+||+++|++| +.+||||||.+| +.|||+|+++|+++||+||||+|+|||||++|+++...
T Consensus 213 ~v~~s~~~L~e~~L~PF~~aI~ag-~~sVM~ah~~v~~lD~~~PAs~S~~lLtdlLR~e~GF~G~VvSD~l~m~ai~~~- 290 (535)
T 3sql_A 213 TISHDDTRLNTVELPPFKAAIQGG-VDAVMNAHLMIPAWDQQYPATLSPAILTGQLRHKLGFKGLIVTDALVMGGITQF- 290 (535)
T ss_dssp BCCCCHHHHHHTTSHHHHHHHHTT-CSEEEECCCBBTTTBSSSCGGGCHHHHCCCCCCCSCCCSEEECSCTTSHHHHTT-
T ss_pred cCCCCHHHHHHHHHHHHHHHHHcC-CCEEEecCccCCCcCCCcCcccCHHHHHHHHHHhcCCCceEEcChhHHHHHHhc-
Confidence 345699999999999999999876 999999999887 48999999999999999999999999999999988652
Q ss_pred cccCCHHHHHHHHHHH--------------HHHHHHHHHCCCCCHHHHHHHHhhhHHHHHHhCCCCCCCCCCCCCCCCCC
Q 007089 159 HYTRTPEEAAADAIKA--------------AIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPR 224 (618)
Q Consensus 159 ~~~~~~~~a~~~al~a--------------~~~l~~av~~G~i~~~~ld~av~RiL~~k~~lGl~~~~p~~~~~~~~~~~ 224 (618)
.+..+++.+|++| .+.|.+||++|+|+++|||+||+|||++|+++|+|+ ++.. .. ..
T Consensus 291 ---~~~~eaa~~Al~AG~Dm~l~~~~~~~~~~~l~~AV~~G~i~e~rId~av~RIL~~K~~lGl~~-~~~~----~~-~~ 361 (535)
T 3sql_A 291 ---AAPDTVVVQAIAAGADILLMPPDVDGAIIAIETAIKTGQLSESRIYESVERIWQAKQKILTAT-PSTF----PQ-GI 361 (535)
T ss_dssp ---SCHHHHHHHHHHHTCSBEESCSCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTSC-CCCT----TT-TC
T ss_pred ---CCHHHHHHHHHHCCCCeecCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCC-CCcc----ch-hh
Confidence 3678999999998 467999999999999999999999999999999998 3322 11 23
Q ss_pred CCCCHHHHHHHHHHHhhcceeccCCCCCCCCC----CCCCcEEEEEccCCCccccccccccccCCCcCCHHHHHHhh-hh
Q 007089 225 DVCTPAHQQLALQAAHQGIVLLKNSARTLPLS----TLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTTPLQGISRY-AK 299 (618)
Q Consensus 225 ~~~~~~~~~la~~~A~esivLLKN~~~~LPL~----~~~~~kIaviGp~a~~~~~~~G~~~g~~~~~~t~~~~l~~~-~~ 299 (618)
.+++++|+++|+++|+||||| +++|||+ +++.++|+|||++++.+. ++|.++..++| ++. .+
T Consensus 362 ~~~~~eh~~lA~e~A~eSiVL----~~~LPL~~~~~~~~~~~laVIG~~a~~~~-----~~g~~~~~~~P----~~~G~~ 428 (535)
T 3sql_A 362 SGDRPETRKTVAMVLERATKH----QKSLVKISSFPDNFARNLIVVDSVLKSPF-----LRPNCPAIAIP----QRHGYA 428 (535)
T ss_dssp CTTCHHHHHHHHHHHHHHCEE----CSSCCCCCCCSTTSEEEEEEESCGGGCTT-----CCTTCHHHHHH----HTTTEE
T ss_pred ccCCHHHHHHHHHHHHhCeEE----CCcCCCCcccccCCCCEEEEECCCCCCcc-----cCCCCCcccCH----HHcCce
Confidence 678999999999999999999 3599998 345689999999998754 34444444444 222 22
Q ss_pred eeeeccccccccCCccchHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHHhcCCCEEEEEEcCc
Q 007089 300 TIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGG 379 (618)
Q Consensus 300 ~~y~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~~~~k~vVvVl~~g~ 379 (618)
+.+...+. +.... .....-.+=+|+-.++-.. +-. |. .+.++++.+. +.-.-+|+. |+
T Consensus 429 ~~~~~~~~---------~~~~~-~~~~~~~~q~f~r~~~f~~-------~~~-~~--~~~~~~l~~~-~~~~~~~~y-g~ 486 (535)
T 3sql_A 429 AEIVELKT---------LPRLQ-LEAIPTLIQCFLRGNPFTE-------KLA-DP--IDVLQKIAAQ-IPLQGVIFY-GS 486 (535)
T ss_dssp EEEEETTT---------GGGBC-CCSSCEEEEEEECCCSSCS-------SCC-CC--HHHHHHHHHH-SCEEEEEEE-EC
T ss_pred EEEEcCcc---------ccccc-cCCCCeEEEEeecCCCCCC-------Ccc-hH--HHHHHHHHhc-CceeEEEEe-CC
Confidence 33322221 00000 0111122224553333221 112 22 5677777764 332344555 79
Q ss_pred eeeccccc-CCCCccEEEEccCCCc--chhHHHHHHHcCC
Q 007089 380 PVDVSFAK-NDPRIGAILWVGYPGQ--AGGAAIADVLFGR 416 (618)
Q Consensus 380 P~~l~~~~-~~~~v~AiL~a~~~G~--e~g~AlAdVL~G~ 416 (618)
||.+.|+. .++ .|-++|.+|| +++.-+-..|++.
T Consensus 487 py~~~~~~~~~~---~~p~~~~~gq~~~~q~~~~~~~~~~ 523 (535)
T 3sql_A 487 PYFLEALQTTLP---EIPWWFSYGQMAIAQAEICTSLWEE 523 (535)
T ss_dssp CTTHHHHHHHCT---TSCEEEESCCSHHHHHHHHHHTCSS
T ss_pred hhHHHHHHHHhh---cCCcccCCccCHHHHHHHHHHHhcc
Confidence 99998874 333 4456788888 5556666677774
No 8
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans}
Probab=100.00 E-value=6.1e-49 Score=412.32 Aligned_cols=190 Identities=19% Similarity=0.318 Sum_probs=166.8
Q ss_pred cceE-eCccccccCCCCCCccc-cccCCCHHHHHHHHHHHHHHHhcCCCCCCeEEEeecccccccCC---CCCCCCcccc
Q 007089 8 GLTY-WSPNVNIFRDPRWGRGQ-ETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLD---NWNGVDRYHF 82 (618)
Q Consensus 8 Gi~~-laP~~di~r~p~~gR~~-e~fgeDP~l~~~~a~a~v~Glq~~~~~~~~v~a~~KHF~g~g~~---~~~~~~r~~~ 82 (618)
|||+ |+|++||.|||+|||++ |||||||+++++|+.|+|+|||+. ||++|+|||||||.+ +|.+.+
T Consensus 125 Gi~~~~aPv~Dv~r~p~~~rig~RsfgeDP~lv~~~a~a~v~Glq~~-----gV~a~~KHFpG~g~~~~dsh~~~~---- 195 (351)
T 3tev_A 125 GINWNFTPVLDINVNPANPVIGDRAYGSDAARVTRHGRAALAGHTRE-----GVAPCAKHFPGHGDTHQDSHLALP---- 195 (351)
T ss_dssp TCCEECCCBCCCCCCTTCCSSGGGSSCSSHHHHHHHHHHHHHHHHTT-----TCEECEEEETCCTTCBCSSTTSCC----
T ss_pred CCCEeccceeEeccCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHc-----CCeEEeeeccCCCCCcCCCCcCCC----
Confidence 9999 99999999999999975 699999999999999999999998 799999999999964 333322
Q ss_pred ccccCHHHHHHhhcHHHHHHHHcCCCceEEec---ccCCCC-cccccCHHHHHHHHHhhcCCCcEEEccchhhhhccccc
Q 007089 83 NARVSKQDLEDTYNVPFKACVVEGKVASVMCS---YNQVNG-KPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQ 158 (618)
Q Consensus 83 ~~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~s---y~~vng-~pa~~s~~ll~~lLR~e~gf~G~ViSD~~~~~~~~~~~ 158 (618)
.+++++++|+|+||+||+++ ++| +.+|||| ||.+|| .|||+|+++|++|||+||||+|+|||||++|+++...
T Consensus 196 ~~~~s~~~L~e~~l~PF~~a-~ag-~~~VM~aHi~y~~id~~~Pa~~s~~ll~~lLR~elGF~G~VvSD~~~m~~i~~~- 272 (351)
T 3tev_A 196 RVSKSRAELDAGELAPFRAL-LPE-TPAIMTAHIVYDALDAEHPATLSPRILTGLLREEWGYDGVIVTDSMGMQAIDAN- 272 (351)
T ss_dssp EECCCHHHHHHTTTHHHHHH-GGG-CSEEEECSCEETTTBSSSCGGGCHHHHCCCCCCCSCCCSEEEECCTTSHHHHHH-
T ss_pred cCCCCHHHHHHhhhHHHHHH-hcC-CCEEEecceEecCCCCCcCccCCHHHHHHHHHhhcCCCeEEEeccchHHHHHhc-
Confidence 45779999999999999999 665 9999999 889998 6999999999999999999999999999999988653
Q ss_pred cccCCHHHHHHHHHHH-----------------HHHHHHHHHCCCCCHHHHHHHHhhhHHHHHHhCCCCCCCCCC
Q 007089 159 HYTRTPEEAAADAIKA-----------------AIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQ 216 (618)
Q Consensus 159 ~~~~~~~~a~~~al~a-----------------~~~l~~av~~G~i~~~~ld~av~RiL~~k~~lGl~~~~p~~~ 216 (618)
.+..+++.+|++| .+.|.++|++ +++|||+||+|||++|+++|+|+ +||.+
T Consensus 273 ---~~~~~~~~~Al~AG~D~~l~~~~~~~~~~~~~~l~~av~~---~~~~id~av~RIL~~k~~~g~f~-~Py~~ 340 (351)
T 3tev_A 273 ---YGRGEAAVRALRAGADLVMALGRREVQQATLAAVAEYVPE---NQAAVATKRERLRALARRFPAQA-DETLD 340 (351)
T ss_dssp ---SCHHHHHHHHHHHTCSBEECCSSHHHHHHHHHHHHHHGGG---CHHHHHHHHHHHHHHHHHSCCCC------
T ss_pred ---CCHHHHHHHHHHcCCCEECCCCChhHHHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHhCCCC-CCCCC
Confidence 2467899999998 2567888888 99999999999999999999999 77754
No 9
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A
Probab=100.00 E-value=4.6e-42 Score=358.72 Aligned_cols=183 Identities=17% Similarity=0.223 Sum_probs=157.1
Q ss_pred cceE-eCccccccCCCCCCccccccCCCHHHHHHHHHHHHHHHhcCCCCCCeEEEeecccccccCCCCCCCCcccccccc
Q 007089 8 GLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARV 86 (618)
Q Consensus 8 Gi~~-laP~~di~r~p~~gR~~e~fgeDP~l~~~~a~a~v~Glq~~~~~~~~v~a~~KHF~g~g~~~~~~~~r~~~~~~~ 86 (618)
|||+ |+|++||.|+ +|.|+.|+|||||+++++|+.|+|+|||+. ||++|+|||||||.+..+ + ..+..+
T Consensus 109 Gi~~~~aPv~Dv~~~-~~~ig~rsfgeDP~lv~~~a~a~v~Glq~~-----gV~a~~KHFpG~G~~~~d---s-h~~~~v 178 (340)
T 2oxn_A 109 DVDLSFAPVLDMGFA-CKAIGNRAFGEDVQTVLKHSSAFLRGMKAV-----GMATTGKHFPGHGAVIAD---S-HLETPY 178 (340)
T ss_dssp TCCEECCCBCCCCSC-STTTGGGSSCSSHHHHHHHHHHHHHHHHHT-----TCCCEEEEETCCTTCCSC---C-SSSSCB
T ss_pred CCCEEecCccCCCCC-CCcCcCCCCCCCHHHHHHHHHHHHHHHHHC-----CceeeeccCcCCCCccCC---C-CCCCcc
Confidence 9999 9999999999 888999999999999999999999999998 799999999999975421 1 112222
Q ss_pred C-HHHHHHhhcHHHHHHHHcCCCceEEec---ccCCCCcccccCHHHHHHHHHhhcCCCcEEEccchhhhhccccccccC
Q 007089 87 S-KQDLEDTYNVPFKACVVEGKVASVMCS---YNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTR 162 (618)
Q Consensus 87 ~-~~~l~e~~l~pF~~ai~~g~~~~vM~s---y~~vng~pa~~s~~ll~~lLR~e~gf~G~ViSD~~~~~~~~~~~~~~~ 162 (618)
+ .++| |+||+||+++|++|++.+|||| ||++||.|||+|+++|+++||+||||+|+|||||++|+++.. ..
T Consensus 179 ~~~~~l-~~~l~PF~~ai~~g~~~~VM~aHv~y~~id~~Pa~~s~~ll~~lLR~elGF~G~VvSD~l~m~~~~~----~~ 253 (340)
T 2oxn_A 179 DERETI-AQDMAIFRAQIEAGVLDAMMPAHVVYPHYDAQPASGSSYWLKQVLREELGFKGIVFSDDLSMEGAAV----MG 253 (340)
T ss_dssp CCCSCC-HHHHHHHHHHHHHTCCSEEEECSCBBTTTBSSCGGGCHHHHTCCCCCCTCCCSEEEEEEGGGSCHHH----HC
T ss_pred CCHHHH-HHHHHHHHHHHHcCCCCeeeeccccccccCCcCcccCHHHHHHHhhcccCCCeEEEcccchhhhhhc----cC
Confidence 3 3889 9999999999999889999999 999999999999999999999999999999999999987642 35
Q ss_pred CHHHHHHHHHHH-------------HHHHHHHHHCCCCCHHHHHHHHhhhHHHHHHhC
Q 007089 163 TPEEAAADAIKA-------------AIHTEGAVRGGLLREEDVNLALAYTITVQMRLG 207 (618)
Q Consensus 163 ~~~~a~~~al~a-------------~~~l~~av~~G~i~~~~ld~av~RiL~~k~~lG 207 (618)
+..+++.+|++| ...+.++++ .++++|+++++.|+...+++++
T Consensus 254 ~~~ea~~~Al~AG~Dm~l~~~~~~~~~~~~~av~--~~~~~Rl~~~~~~~~~~~~~l~ 309 (340)
T 2oxn_A 254 GPVERSHQALVAGCDMILICNKREAAVEVLDNLP--IMEVPQAEALLKKQQFSYSELK 309 (340)
T ss_dssp SHHHHHHHHHHHTCSEEECCSCHHHHHHHHHHSC--CCCCGGGGGGSCSCCCCHHHHH
T ss_pred CHHHHHHHHHHcCCCEEcCCCCHHHHHHHHHHHH--HhhHHHHHHHhhcccccHHHHh
Confidence 778999999999 456777774 4899999999988875555554
No 10
>4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A*
Probab=100.00 E-value=1.2e-41 Score=356.05 Aligned_cols=183 Identities=17% Similarity=0.247 Sum_probs=156.5
Q ss_pred cceE-eCccccccC-CCCCCccccccCCCHHHHHHHHHHHHHHHhcCCCCCCeEEEeecccccccCCC---CCCCCcccc
Q 007089 8 GLTY-WSPNVNIFR-DPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDN---WNGVDRYHF 82 (618)
Q Consensus 8 Gi~~-laP~~di~r-~p~~gR~~e~fgeDP~l~~~~a~a~v~Glq~~~~~~~~v~a~~KHF~g~g~~~---~~~~~r~~~ 82 (618)
|||+ |+|++||.| +|.|| +|||||||+++++|+.|+|+|||+. ||++|+|||||||.+. |.+.+.
T Consensus 112 Gin~~faPv~Dv~r~~~~ig--~rsfgeDP~lv~~~a~a~v~Glq~~-----GV~a~~KHFpG~G~~~~dsh~~~~v--- 181 (349)
T 4gvf_A 112 DIDISFAPVLDVGHISAAIG--ERSYHADPAKALAMATRFIDGMHDA-----GMKTTGKHFPGHGAVTADSHKETPC--- 181 (349)
T ss_dssp TCCEECCCBCCCCSCCTTTG--GGSSCSSHHHHHHHHHHHHHHHHHH-----TCCCEEEEETCCTTCCCCSSSSCCB---
T ss_pred CCCEEecCcccCCCCCCCCc--CcCCCCCHHHHHHHHHHHHHHHHHc-----CceeeecccccCCCcccCCCCCCCC---
Confidence 9999 999999998 46655 8999999999999999999999998 7999999999999653 222221
Q ss_pred ccccCHHHHHHhhcHHHHHHHHcCCCceEEec---ccCCCCcccccCHHHHHHHHHhhcCCCcEEEccchhhhhcccccc
Q 007089 83 NARVSKQDLEDTYNVPFKACVVEGKVASVMCS---YNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQH 159 (618)
Q Consensus 83 ~~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~s---y~~vng~pa~~s~~ll~~lLR~e~gf~G~ViSD~~~~~~~~~~~~ 159 (618)
.+.+.++|+|.||+||+++|++|++.+|||| ||++|+.|||+|+++|++|||+||||+|+|||||++|.++.
T Consensus 182 -~~~s~~el~~~~l~PF~~aI~~g~~~~VM~aHv~y~~id~~Pa~~S~~ll~~lLR~elGF~G~VvSD~l~m~~~~---- 256 (349)
T 4gvf_A 182 -DPRPETDIRGKDMSVFRTLISENKLDAIMPAHVIYRAIDPRPASGSPYWLKTVLRQELGFDGVIFSDDLSMEGAA---- 256 (349)
T ss_dssp -CCCCHHHHHHTHHHHHHHHHHTTCCSEEEECSCBCTTTCSSCGGGCHHHHCCCCCCCTCCCSEEEEEEGGGCCCG----
T ss_pred -CCcCHHHHHHHHhHHHHHHHHcCCCCeEeecccccCCCCCCCCcCCHHHHHHHHHHhcCCCEEEEecCCcccccc----
Confidence 2457889999999999999999889999999 99999999999999999999999999999999999998763
Q ss_pred ccCCHHHHHHHHHHH-------------HHHHHHHHHCCCCCHHHHHHHHhhhHHHHHHhC
Q 007089 160 YTRTPEEAAADAIKA-------------AIHTEGAVRGGLLREEDVNLALAYTITVQMRLG 207 (618)
Q Consensus 160 ~~~~~~~a~~~al~a-------------~~~l~~av~~G~i~~~~ld~av~RiL~~k~~lG 207 (618)
...+..+++.+|++| ...+.+++.+ ++++|+++++.|++...+.++
T Consensus 257 ~~~~~~eaa~~Al~AG~Dm~l~~~~~~~~~~~l~al~~--~~~~r~~~~~~r~~~~~~~l~ 315 (349)
T 4gvf_A 257 IMGSYAERAQASLDAGCDMILVCNNRKGAVSVLDNLSP--IKAERVTRLYHKGSFSRRELM 315 (349)
T ss_dssp GGCCHHHHHHHHHHHTCSEEEECSCHHHHHHHHHHSCC--CCCGGGGGGCCCCCCCHHHHH
T ss_pred ccCCHHHHHHHHHHcCCCEEcCCCCHHHHHHHHHHhhh--ccHHHHHHHhhcCCCCHHHHh
Confidence 245788999999999 3456777764 788899888888766555544
No 11
>4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A*
Probab=100.00 E-value=8.1e-41 Score=349.99 Aligned_cols=179 Identities=19% Similarity=0.220 Sum_probs=148.4
Q ss_pred cceE-eCccccccCCCCCCccccccCCCHHHHHHHHHHHHHHHhcCCCCCCeEEEeecccccccCCC---CCCCCccccc
Q 007089 8 GLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDN---WNGVDRYHFN 83 (618)
Q Consensus 8 Gi~~-laP~~di~r~p~~gR~~e~fgeDP~l~~~~a~a~v~Glq~~~~~~~~v~a~~KHF~g~g~~~---~~~~~r~~~~ 83 (618)
|||+ |+|++||..++.+-++.|+|||||+++++|+.|+|+|||+. ||++|+|||||||.+. |.+.+.
T Consensus 124 Gi~~~~aPv~Dv~~gr~~~iG~rsfgeDP~lv~~~a~A~v~Glq~~-----GV~a~~KHFpG~G~~~~dsh~~~~v---- 194 (348)
T 4g6c_A 124 GIDMSFTPVLDLDYGHSKVIGDRAFHRDPRVVTLLAKSLNHGLSLA-----GMANCGKHFPGHGFAEADSHVALPT---- 194 (348)
T ss_dssp TCCEECCCBCCCCCSCCTTTGGGSCCSSHHHHHHHHHHHHHHHHHT-----TCCCCEEEETCSSSCCC----CCCE----
T ss_pred CCCEeecCccCCCCCCCCCccCcCCCCCHHHHHHHHHHHHHHHHhc-----CCceeeCCCCCCCCccCCCCCCCCc----
Confidence 9999 99999998443333557999999999999999999999998 7999999999999653 222221
Q ss_pred cccCHHHHHHhhcHHHHHHHHcCCCceEEec---ccCCCCcccccCHHHHHHHHHhhcCCCcEEEccchhhhhccccccc
Q 007089 84 ARVSKQDLEDTYNVPFKACVVEGKVASVMCS---YNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHY 160 (618)
Q Consensus 84 ~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~s---y~~vng~pa~~s~~ll~~lLR~e~gf~G~ViSD~~~~~~~~~~~~~ 160 (618)
.+.+.++|++.||+||+++ ++| +.+|||| ||++||+|||+|+++|+++||+||||+|+|||||++|.++..
T Consensus 195 ~~~~~~el~~~~l~PF~~a-~ag-~~~VM~aHv~y~~id~~Pa~~S~~ll~~lLR~elGF~G~VvSD~l~m~~~~~---- 268 (348)
T 4g6c_A 195 DDRTLDAILEQDVAPYDWL-GLS-LAAVIPAHVIYTQVDKRPAGFSRVWLQDILRGKLGFTGAIFSDDLSMEAARE---- 268 (348)
T ss_dssp ECCCHHHHHHTTSHHHHHH-GGG-CCEEEECSCEETTTCSSCGGGCHHHHCCCCCCCSCCCSEEEEEETTCGGGGT----
T ss_pred CCCCHHHHHHHHHHHHHHH-hcC-CCeEEecceeecCCCCccccCCHHHHHHHHhhccCCCeEEEccCCchhhhhh----
Confidence 2346677888899999999 766 9999999 999999999999999999999999999999999999987642
Q ss_pred cCCHHHHHHHHHHH-------------HHHHHHHHHCCCCCHHHHHHHHhhhHHHHHHh
Q 007089 161 TRTPEEAAADAIKA-------------AIHTEGAVRGGLLREEDVNLALAYTITVQMRL 206 (618)
Q Consensus 161 ~~~~~~a~~~al~a-------------~~~l~~av~~G~i~~~~ld~av~RiL~~k~~l 206 (618)
..+..+++.+|++| ...+.++++. ++++++++||++++.|.
T Consensus 269 ~~~~~e~a~~Al~AG~Dm~l~~~~~~~~~~~~~al~~-----~~~~~~~~Ri~~l~~r~ 322 (348)
T 4g6c_A 269 GGTLTQAADAALAAGCDMVLVCNQPDAAEVVLNGLKA-----RASAESVRRIKRMRARG 322 (348)
T ss_dssp TCCHHHHHHHHHHHTCSEEECCSCHHHHHHHHHHCCC-------CHHHHHHHHTTSCCS
T ss_pred cCCHHHHHHHHHHcCCCEECCCCChHHHHHHHHHhhc-----ccchHHHHHHHHHHhcc
Confidence 46788999999999 4456666653 56789999999988653
No 12
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=96.87 E-value=0.0025 Score=56.66 Aligned_cols=50 Identities=14% Similarity=0.157 Sum_probs=40.9
Q ss_pred eEEEEEEEEeCCCCC-cceEEEEeeeCCCCCCCCccccccccccccCCCCeEEEEEEecc
Q 007089 518 SLGLHVDIKNTGDMA-GTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHV 576 (618)
Q Consensus 518 ~~~v~v~VtNtG~~~-G~evvQlY~~~~~~~~~P~k~L~gF~kv~l~pGes~~V~~~l~~ 576 (618)
.++++|+|+|.|..+ +.--|.||+.. ++.+-+-+.|+||++++|+|.+.+
T Consensus 34 ~~ti~vtV~N~G~~~a~~~~V~lyvng---------~~v~t~~v~La~G~s~tv~f~~~~ 84 (127)
T 3idu_A 34 LAEYEVHVKNLGGIGVPSTKVRVYING---------TLYKNWTVSLGPKEEKVLTFNWTP 84 (127)
T ss_dssp CEEEEEEEEECSSSCEEEEEEEEEETT---------EEEEEEEEEECTTCEEEEEEEECC
T ss_pred EEEEEEEEEECCCCccCCcEEEEEECC---------EEEeeEEeccCCCCeEEEEEEEEc
Confidence 689999999999975 67789999844 234444567999999999999987
No 13
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=96.38 E-value=0.011 Score=51.27 Aligned_cols=61 Identities=10% Similarity=0.176 Sum_probs=48.2
Q ss_pred eEEEEEEEEeCCCC-CcceEEEEeeeCCCCCCCCcccccccccc-ccCCCCeEEEEEEeccCCceeEEeCCCCEEecCce
Q 007089 518 SLGLHVDIKNTGDM-AGTHTLLVFAKPPAGNWSPNKQLIGFKKV-HVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGE 595 (618)
Q Consensus 518 ~~~v~v~VtNtG~~-~G~evvQlY~~~~~~~~~P~k~L~gF~kv-~l~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~G~ 595 (618)
.++++++|+|.|.. ++.-.|-+|+.. .+.+.+.| .|++|++++|+|++.+ . -++|.
T Consensus 20 ~~ti~atVkN~G~~~a~~~~V~ly~~g---------~~v~t~~v~~LaaG~s~tv~~~w~~-~------------~~~G~ 77 (114)
T 2l0d_A 20 VNTMTATIENQGNKDSTSFNVSLLVDG---------IVVDTQTVTSLESENSTNVDFHWTL-D------------GTANS 77 (114)
T ss_dssp EEEEEEEEEECSSSCBCCEEEEEEETT---------EEEEEEEESCBCBTCEEEEEEEEEC-C------------CSCSE
T ss_pred eEEEEEEEEECCCCCCCCEEEEEEECC---------EEEcceecccccCCCEEEEEEEEee-c------------CcCce
Confidence 68999999999985 577889999854 46666777 5999999999998776 2 03677
Q ss_pred EEEEE
Q 007089 596 HSLHI 600 (618)
Q Consensus 596 y~i~v 600 (618)
|+|.+
T Consensus 78 ytl~a 82 (114)
T 2l0d_A 78 YTLTV 82 (114)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77765
No 14
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=95.98 E-value=0.0061 Score=53.56 Aligned_cols=54 Identities=17% Similarity=0.263 Sum_probs=40.4
Q ss_pred eEEEEEEEEeCCCC-CcceEEEEeeeCCCCCCCCcccccccccc-ccCCCCeEEEEEEec
Q 007089 518 SLGLHVDIKNTGDM-AGTHTLLVFAKPPAGNWSPNKQLIGFKKV-HVTAGALQSVRLDIH 575 (618)
Q Consensus 518 ~~~v~v~VtNtG~~-~G~evvQlY~~~~~~~~~P~k~L~gF~kv-~l~pGes~~V~~~l~ 575 (618)
.++++++|+|.|.. ++.--|.+|+..|......+ |-..| .|+||+|.+++|++.
T Consensus 17 ~vTvsatVkN~Gt~~s~a~~V~~yl~~p~~gg~~v----gt~tv~~LaaG~s~t~~v~~~ 72 (122)
T 2kut_A 17 EITVSARVTNRGAAEAHNVPVAVYLGNPAQGGVEI----GRDTISRIPVGGTGLARVQWK 72 (122)
T ss_dssp EEEEEEEEECCSSSCBCCCCEEECSSCTTTCCCCC----BCCCCSCBCTTCEEECCEEEE
T ss_pred eEEEEEEEEeCCCcccCcEEEEEEeCCCccCCeEE----eeEEccccCCCCeEEEEEEEe
Confidence 79999999999987 56778999999875433333 33335 499999999555544
No 15
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=93.10 E-value=0.38 Score=41.90 Aligned_cols=67 Identities=12% Similarity=0.148 Sum_probs=46.2
Q ss_pred eEEEEEEEEeCCCCC-------cceEEEEeeeCCCCC-------CCCccccccccccccCCCCeEEEEEEeccCCceeEE
Q 007089 518 SLGLHVDIKNTGDMA-------GTHTLLVFAKPPAGN-------WSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVV 583 (618)
Q Consensus 518 ~~~v~v~VtNtG~~~-------G~evvQlY~~~~~~~-------~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ls~~ 583 (618)
.+.++++|+|.|+.+ |. -..+.+.+..+. ++---+ .+..+.|+|||+.+.+++++.
T Consensus 19 ~v~~~ltv~N~s~~~v~l~f~Sgq-~~Df~v~d~~G~~VwrwS~~~~FtQ--a~~~~tl~pGE~~~f~~~w~~------- 88 (120)
T 3isy_A 19 QIKFNMSLKNQSERAIEFQFSTGQ-KFELVVYDSEHKERYRYSKEKMFTQ--AFQNLTLESGETYDFSDVWKE------- 88 (120)
T ss_dssp CEEEEEEEEECSSSCEEEEESSSC-CEEEEEECTTCCEEEETTTTCCCCC--CCEEEEECTTCEEEEEEEESS-------
T ss_pred eEEEEEEEEcCCCCcEEEEeCCCC-EEEEEEECCCCCEEEEccccchhhh--hhceEEECCCCEEEEEEEeCC-------
Confidence 689999999999954 22 123444443331 222222 566778999999999999983
Q ss_pred eCCCCEEecCceEEEEE
Q 007089 584 DKFGIRRIPMGEHSLHI 600 (618)
Q Consensus 584 d~~~~~~~~~G~y~i~v 600 (618)
.++||.|++.+
T Consensus 89 ------~~~pG~Ytl~a 99 (120)
T 3isy_A 89 ------VPEPGTYEVKV 99 (120)
T ss_dssp ------CCCSEEEEEEE
T ss_pred ------CCCCccEEEEE
Confidence 37899999864
No 16
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.69 E-value=0.71 Score=39.13 Aligned_cols=61 Identities=10% Similarity=0.103 Sum_probs=37.7
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeC-CCCCCCCccccccccccccCCCCeEEEEEEeccCCceeEEeC
Q 007089 518 SLGLHVDIKNTGDMAGTHTLLVFAKP-PAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDK 585 (618)
Q Consensus 518 ~~~v~v~VtNtG~~~G~evvQlY~~~-~~~~~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ls~~d~ 585 (618)
..+.+++++|+|+.. ++++. +........--.-..+-.|+||++.+|++++.+ +....+++
T Consensus 27 ~~~~~~~l~N~g~~p------~~~~~~~~~~~~~~~f~v~p~~g~i~pg~~~~i~V~f~~-~~~g~f~~ 88 (112)
T 2e6j_A 27 AHCYEAILYNKGSID------ALFNMTPPTSALGACFVFSPKEGIIEPSGVQAIQISFSS-IILGNFEE 88 (112)
T ss_dssp CEEEEEEEEECCSSC------EEEEECCCSSHHHHHCEEESSEEEECTTBCCEEEEEECC-CCCEEEEE
T ss_pred EEEEEEEEEECCcce------EEEEEecCCccccCcEEEECCcCEECCCCEEEEEEEEEC-CCcceEEE
Confidence 468899999999986 33322 111000000011234456999999999999998 66666553
No 17
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=88.50 E-value=0.69 Score=38.42 Aligned_cols=51 Identities=24% Similarity=0.302 Sum_probs=31.0
Q ss_pred EEEEEEEEeCCCCCcceEEEEeeeCCCCCCCC-----ccccccc-------cccccCCCCeEEEEEE
Q 007089 519 LGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSP-----NKQLIGF-------KKVHVTAGALQSVRLD 573 (618)
Q Consensus 519 ~~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P-----~k~L~gF-------~kv~l~pGes~~V~~~ 573 (618)
-+++++|+|||+|. +|+=-........| ...=.|+ .-|..+|||+++|++.
T Consensus 20 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~r~V~LV 82 (101)
T 4ep8_B 20 ATCRVVVENHGDRP----IQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRFEPGQKREVELV 82 (101)
T ss_dssp CEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEECTTCEEEEEEE
T ss_pred CEEEEEEEeCCCcc----eEEccccChhHcCcceeecHhhccCceecccCCCeEeeCCCCeEEEEEE
Confidence 47899999999999 88732221111111 1111222 3466799999999874
No 18
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=88.05 E-value=0.8 Score=40.36 Aligned_cols=53 Identities=17% Similarity=0.346 Sum_probs=31.0
Q ss_pred EEEEEEEeCCCCC----cceEEEEe-----------eeC-CCCC----CCCccccccccccccCCCCeEEEEEEec
Q 007089 520 GLHVDIKNTGDMA----GTHTLLVF-----------AKP-PAGN----WSPNKQLIGFKKVHVTAGALQSVRLDIH 575 (618)
Q Consensus 520 ~v~v~VtNtG~~~----G~evvQlY-----------~~~-~~~~----~~P~k~L~gF~kv~l~pGes~~V~~~l~ 575 (618)
+|+|+++|+|... +-++|-.= +.. +... ..| +.| +.-..|.||||.+|+|+++
T Consensus 27 ~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~-~~~--~~t~~l~pGes~~vtf~~~ 99 (128)
T 2iaa_C 27 EFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDE-RVI--AHTSVIGGGETDSVTFDVS 99 (128)
T ss_dssp EEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCT-TEE--EECCCBCTTCEEEEEEESS
T ss_pred EEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccc-hhh--ccceeeCCCCEEEEEEecc
Confidence 6889999999886 66665321 000 0000 001 111 1122479999999999986
No 19
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=87.78 E-value=0.77 Score=40.27 Aligned_cols=56 Identities=21% Similarity=0.381 Sum_probs=35.0
Q ss_pred EEEEEEEeCCCCC----cceEEEEeeeCCCCC------CCCc--------cccccccccccCCCCeEEEEEEecc
Q 007089 520 GLHVDIKNTGDMA----GTHTLLVFAKPPAGN------WSPN--------KQLIGFKKVHVTAGALQSVRLDIHV 576 (618)
Q Consensus 520 ~v~v~VtNtG~~~----G~evvQlY~~~~~~~------~~P~--------k~L~gF~kv~l~pGes~~V~~~l~~ 576 (618)
+|+++++|+|+.+ |-++|-.=-...... ..|. .....-.++ |.|||+.+|+|+.+.
T Consensus 28 ~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~-l~pGes~~vtf~~~~ 101 (125)
T 3fsa_A 28 QFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKL-IGSGEKDSVTFDVSK 101 (125)
T ss_dssp EEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCC-BCTTCEEEEEEEGGG
T ss_pred EEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccce-eCCCcEEEEEEeCcC
Confidence 7889999999998 888887621111100 0111 112222222 899999999999874
No 20
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=87.06 E-value=1.1 Score=46.44 Aligned_cols=62 Identities=18% Similarity=0.165 Sum_probs=36.6
Q ss_pred eEEEEEEEEeCCCCCc------------ceEEEEeeeC---CCCC---CCCccccccccccccCCCCeEEEEEEeccCCc
Q 007089 518 SLGLHVDIKNTGDMAG------------THTLLVFAKP---PAGN---WSPNKQLIGFKKVHVTAGALQSVRLDIHVCKH 579 (618)
Q Consensus 518 ~~~v~v~VtNtG~~~G------------~evvQlY~~~---~~~~---~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ 579 (618)
.+.|.++|||+|+.+= .+.++++-.. |... .+..-.+..| +.|+||||.+++|.|....+
T Consensus 37 ~~~vk~tvtN~g~~~~~lLk~~~lD~~~~~~~~V~~~G~~v~f~Gi~~~~~~~~~d~f--~~L~pG~Sve~~~dla~~yd 114 (343)
T 2x3c_A 37 DVRVNLTLTNTGDKPIRLLKWQLPGSDDAPLFLVERDGQPVSYEGALIKRAAPTDKDF--QLLKAGQSLTVQAEVSGLYD 114 (343)
T ss_dssp CCEEEEEEEECSSSCEEEEGGGSCSSSCCCCEEEEETTEECCBCSCCCCCCCCCGGGE--EEECTTCEEEEEEECTTTBT
T ss_pred CeEEEEEEEeCCCCceEeeccCCCCcCccceEEEEeCCcccceeeEEEeccCCChhhc--EEeCCCCeEEEEEehhhccc
Confidence 4789999999998541 1234443111 1110 0111123445 56999999999999976445
Q ss_pred ee
Q 007089 580 LS 581 (618)
Q Consensus 580 ls 581 (618)
|+
T Consensus 115 Ls 116 (343)
T 2x3c_A 115 MS 116 (343)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 21
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=86.85 E-value=1.2 Score=49.27 Aligned_cols=102 Identities=14% Similarity=0.152 Sum_probs=63.2
Q ss_pred cccccCcCCCCCCceecCCccCCCcccccccccccccccccccccccccccCCCCCeeEEEEEEEEeCCC--CCcceEEE
Q 007089 461 VVFPFGHGMSYTTFAHTLSKAPNQFSVPIATSLYAFKNTTISSNAIRVAHTNCNDAMSLGLHVDIKNTGD--MAGTHTLL 538 (618)
Q Consensus 461 ~~ypFG~GLSYTtF~ys~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~VtNtG~--~~G~evvQ 538 (618)
.+|..|.|+.|..|..+.+..... ..++ ....+. .+. +.+|+++|+|.+. ++|.+++
T Consensus 337 ~~ye~~~~i~~~~~~~~~l~~~~~-~~~~--------------~~~~~~----~g~-~~~~~~~vtn~~~~~~~~~~~~- 395 (601)
T 1w8o_A 337 LLYEPGTGIRYANFNLAWLGGICA-PFTI--------------PDVALE----PGQ-QVTVPVAVTNQSGIAVPKPSLQ- 395 (601)
T ss_dssp EEECCSSEEEEEEECHHHHTBCSC-CEEC--------------CCEEEC----TTC-EEEEEEEEECCSSSCBSSCEEE-
T ss_pred EEEecCCcceEEEecHHHhccccC-CCcC--------------ccceec----CCc-eeEEEEEEECCCceeccCceEE-
Confidence 467777788888888777653210 0000 011111 122 6899999999977 7888877
Q ss_pred EeeeCCCCCCCCccccccccccccCCCCeEEEEEEeccCCceeEEeCCCCEEecCceEEEEEeC
Q 007089 539 VFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIGD 602 (618)
Q Consensus 539 lY~~~~~~~~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~G~y~i~vG~ 602 (618)
||+...... .+ .-..++|||+.++.|+|.. .+- +++|.|.+.+.-
T Consensus 396 ~~~~~~~~~-------~~-~~~~~~~g~~~t~~~~vt~-~~~----------~~~g~y~l~~~~ 440 (601)
T 1w8o_A 396 LDASPDWQV-------QG-SVEPLMPGRQAKGQVTITV-PAG----------TTPGRYRVGATL 440 (601)
T ss_dssp EECCTTSEE-------EE-EECCBCTTCEEEEEEEEEC-CTT----------CCCEEEEEEEEE
T ss_pred EecCCCcEE-------ec-cccccCCCCceEEEEEEec-CCC----------CCCCcEEeeEEE
Confidence 887443321 11 2266899999999888776 331 446777766553
No 22
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=86.45 E-value=0.9 Score=40.04 Aligned_cols=15 Identities=33% Similarity=0.508 Sum_probs=13.7
Q ss_pred ccCCCCeEEEEEEec
Q 007089 561 HVTAGALQSVRLDIH 575 (618)
Q Consensus 561 ~l~pGes~~V~~~l~ 575 (618)
.|.||||.+|+|+.+
T Consensus 86 ~l~pGet~svtf~~~ 100 (128)
T 1nwp_A 86 VIGAGEKDSVTFDVS 100 (128)
T ss_dssp CBCTTCEEEEEEEGG
T ss_pred eeCCCCEEEEEEecc
Confidence 489999999999986
No 23
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=85.86 E-value=1.3 Score=39.11 Aligned_cols=15 Identities=20% Similarity=0.412 Sum_probs=13.6
Q ss_pred ccCCCCeEEEEEEec
Q 007089 561 HVTAGALQSVRLDIH 575 (618)
Q Consensus 561 ~l~pGes~~V~~~l~ 575 (618)
.|.|||+.+|+|+.+
T Consensus 86 ~l~pGet~svtf~~~ 100 (129)
T 1cuo_A 86 IIGGGEKTSVKFKVS 100 (129)
T ss_dssp CBCTTCEEEEEEEGG
T ss_pred EECCCCEEEEEEecc
Confidence 479999999999986
No 24
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=85.78 E-value=1.7 Score=44.47 Aligned_cols=55 Identities=13% Similarity=0.239 Sum_probs=35.9
Q ss_pred eEEEEEEEEeCCCCCcceEEEE---------eeeCCCCC--CCCcccccccccc------ccCCCCeEEEEEEecc
Q 007089 518 SLGLHVDIKNTGDMAGTHTLLV---------FAKPPAGN--WSPNKQLIGFKKV------HVTAGALQSVRLDIHV 576 (618)
Q Consensus 518 ~~~v~v~VtNtG~~~G~evvQl---------Y~~~~~~~--~~P~k~L~gF~kv------~l~pGes~~V~~~l~~ 576 (618)
+++++++|||+|+.+ |+| |+.+.... ..-..+|.+.+.. -++||||++|+++...
T Consensus 265 ~l~~~~~VtN~g~~p----vrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~pI~PGETr~~~v~a~d 336 (382)
T 1yew_A 265 AMRMKLTITNHGNSP----IRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSPLAPGETRTVDVTASD 336 (382)
T ss_dssp EEEEEEEEEECSSSC----EEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSCBCTTCEEEEEEEEEC
T ss_pred EEEEEEEEEcCCCCc----eEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCCCcCCCceeEEEEEeeh
Confidence 799999999998765 665 33321111 2223456644333 2899999999998764
No 25
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=85.12 E-value=1.4 Score=38.15 Aligned_cols=51 Identities=20% Similarity=0.154 Sum_probs=31.2
Q ss_pred EEEEEEEEeCCCCCcceEEEEeeeCCCCCCCC-----ccccccc-------cccccCCCCeEEEEEE
Q 007089 519 LGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSP-----NKQLIGF-------KKVHVTAGALQSVRLD 573 (618)
Q Consensus 519 ~~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P-----~k~L~gF-------~kv~l~pGes~~V~~~ 573 (618)
-+++++|+|||+|. ||+=-........| ...=.|+ .-|..+|||+++|++.
T Consensus 26 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ac7_B 26 EKTTIRVSNTGDRP----IQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp CEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred cEEEEEEEeCCCCC----EEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 47899999999999 88732222111111 1111222 3466799999999884
No 26
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=85.12 E-value=1.4 Score=38.15 Aligned_cols=51 Identities=20% Similarity=0.154 Sum_probs=31.2
Q ss_pred EEEEEEEEeCCCCCcceEEEEeeeCCCCCCCC-----ccccccc-------cccccCCCCeEEEEEE
Q 007089 519 LGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSP-----NKQLIGF-------KKVHVTAGALQSVRLD 573 (618)
Q Consensus 519 ~~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P-----~k~L~gF-------~kv~l~pGes~~V~~~ 573 (618)
-+++++|+|||+|. ||+=-........| ...=.|+ .-|..+|||+++|++.
T Consensus 26 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ubp_B 26 EKTTIRVSNTGDRP----IQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp CEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred cEEEEEEEeCCCCC----EEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 47899999999999 88732222111111 1111222 3466799999999884
No 27
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=85.01 E-value=0.69 Score=42.76 Aligned_cols=15 Identities=27% Similarity=0.306 Sum_probs=13.5
Q ss_pred ccCCCCeEEEEEEec
Q 007089 561 HVTAGALQSVRLDIH 575 (618)
Q Consensus 561 ~l~pGes~~V~~~l~ 575 (618)
.|.|||+.+|+|+++
T Consensus 125 ~l~pGet~svtf~~~ 139 (167)
T 3ay2_A 125 LIGGGEESSLTLDPA 139 (167)
T ss_dssp CBCTTCEEEEEECGG
T ss_pred eeCCCCEEEEEEecC
Confidence 479999999999986
No 28
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=84.60 E-value=1.3 Score=39.06 Aligned_cols=15 Identities=27% Similarity=0.465 Sum_probs=13.7
Q ss_pred ccCCCCeEEEEEEec
Q 007089 561 HVTAGALQSVRLDIH 575 (618)
Q Consensus 561 ~l~pGes~~V~~~l~ 575 (618)
.|.||||.+|+|+.+
T Consensus 86 ~l~pGet~svtf~~~ 100 (129)
T 2ccw_A 86 VIGGGESDSVTFDVS 100 (129)
T ss_dssp CBCTTCEEEEEEEGG
T ss_pred EECCCCEEEEEEecc
Confidence 479999999999987
No 29
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.92 E-value=4.9 Score=34.60 Aligned_cols=56 Identities=11% Similarity=0.147 Sum_probs=37.6
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCCCCCCccccccccccccCCCCeEEEEEEeccCCceeEEe
Q 007089 518 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVD 584 (618)
Q Consensus 518 ~~~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ls~~d 584 (618)
+-+.++.|+|+|..+++-..+. ..|. ...|. +-.|+|||+.+|+++..+ .....|+
T Consensus 42 ~~~~~~~l~N~g~~~~~f~~~~--~~~F-~i~P~-------~g~L~pg~~~~i~V~F~P-~~~g~~~ 97 (122)
T 2ys4_A 42 STQKILLVRNIGNKNAVFHIKT--CRPF-SIEPA-------IGTLNVGESMQLEVEFEP-QSVGDHS 97 (122)
T ss_dssp CEEEEEEEECCSSSCEEEEEEC--CTTE-EEESS-------EEEECTTCEEEEEEEECC-SSSBCCC
T ss_pred eEEEEEEEEECCCCCEEEEEec--CCCe-EEECC-------cCEECCCCEEEEEEEEEc-CCCccEE
Confidence 4688999999999886643221 1111 12343 245899999999999999 6555443
No 30
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=71.63 E-value=5.3 Score=41.33 Aligned_cols=53 Identities=19% Similarity=0.345 Sum_probs=33.4
Q ss_pred eEEEEEEEEeCCCCCcceEEEE--eeeC------CCC-C---CCCccccc---c--ccccccCCCCeEEEEEEecc
Q 007089 518 SLGLHVDIKNTGDMAGTHTLLV--FAKP------PAG-N---WSPNKQLI---G--FKKVHVTAGALQSVRLDIHV 576 (618)
Q Consensus 518 ~~~v~v~VtNtG~~~G~evvQl--Y~~~------~~~-~---~~P~k~L~---g--F~kv~l~pGes~~V~~~l~~ 576 (618)
+++++++|||+|+.+ ||| |-+. |.- . ..| ++|. | =.. -|+||||++|+++++.
T Consensus 299 ~l~~~~~VtN~g~~p----vrlgeF~tA~vrFlnp~v~~~~~~~p-~~l~a~~GL~s~~-pI~PGETrt~~V~a~d 368 (419)
T 3rfr_A 299 ELTINVKVKNGTSQP----VRLGEYTAAGLRFLNPTVFTQKPDFP-DYLLADRGLSNDD-VIAPGESKEIVVKIQD 368 (419)
T ss_dssp EEEEEEEEECCSSSC----BEEEEEECSSCEEECTTTCSSCCCCC-TTTEESCCCCCCC-CBCTTCEEEEEEEEEC
T ss_pred EEEEEEEEecCCCCc----eEEeeEEEccEEEeCcccccCCCCCc-hhhhhccCCCCCC-CcCCCcceEEEEEeeh
Confidence 799999999999765 555 2211 110 1 122 2332 2 233 6999999999998764
No 31
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=69.88 E-value=5.1 Score=37.99 Aligned_cols=51 Identities=18% Similarity=0.122 Sum_probs=30.7
Q ss_pred EEEEEEEEeCCCCCcceEEEEeeeCCCCCCCC-----ccccccc-------cccccCCCCeEEEEEE
Q 007089 519 LGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSP-----NKQLIGF-------KKVHVTAGALQSVRLD 573 (618)
Q Consensus 519 ~~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P-----~k~L~gF-------~kv~l~pGes~~V~~~ 573 (618)
-+++++|+|||+|. ||+=-........| ...=.|| .-|..+|||+++|++.
T Consensus 125 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 187 (225)
T 3qga_A 125 EITELKVTNKGPKS----LHVGSHFHFFEANRALEFDREKAYGKRLDIPSGNTLRIGAGETKTVHLI 187 (225)
T ss_dssp CCEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred ceEEEEEEECCCCc----eeeccccchhhcCchhhccHHHhCCcccccCCCCeEeeCCCCeeEEEEE
Confidence 36899999999999 88732222111111 1111222 3466799999999874
No 32
>1e9y_A Urease subunit alpha; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=67.42 E-value=5 Score=38.37 Aligned_cols=51 Identities=22% Similarity=0.194 Sum_probs=31.1
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCCCCCC-----ccccccc-------cccccCCCCeEEEEEEe
Q 007089 520 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSP-----NKQLIGF-------KKVHVTAGALQSVRLDI 574 (618)
Q Consensus 520 ~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P-----~k~L~gF-------~kv~l~pGes~~V~~~l 574 (618)
+++++|+|||+|. ||+=-........| ...=.|| .-|..+||++++|++.-
T Consensus 126 ~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTAVRFEPG~~r~V~LV~ 188 (238)
T 1e9y_A 126 AVSVKVKNVGDRP----VQIGSHFHFFEVNRCLDFDREKTFGKRLDIAAGTAVRFEPGEEKSVELID 188 (238)
T ss_dssp CCEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSSTTCEEEECTTCEEEEEEEE
T ss_pred eEEEEEEeCCCCc----eEeccccchHhcCccccccHHHhCCcccCcCCCCeEeeCCCCeeEEEEEE
Confidence 6889999999999 88732222111111 1111222 34667999999999853
No 33
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=64.55 E-value=18 Score=31.91 Aligned_cols=55 Identities=15% Similarity=0.037 Sum_probs=32.9
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCC-CCCCCcccccc-ccccccCCCCeEEEEEEecc
Q 007089 518 SLGLHVDIKNTGDMAGTHTLLVFAKPPA-GNWSPNKQLIG-FKKVHVTAGALQSVRLDIHV 576 (618)
Q Consensus 518 ~~~v~v~VtNtG~~~G~evvQlY~~~~~-~~~~P~k~L~g-F~kv~l~pGes~~V~~~l~~ 576 (618)
..+-+++|+|||.+... .-+..+. ........|.= =.+-.|.|||+.+|++++..
T Consensus 44 ~~~~~l~I~Ntg~vpa~----F~f~~~~~~~~~~~~wl~v~P~~G~L~Pge~~~I~v~~~v 100 (140)
T 3qbt_B 44 LQKEKFQISNNGQVPCH----FSFIPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYV 100 (140)
T ss_dssp CEEEEEEEEECSSSCEE----EEEECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECB
T ss_pred eeeeEEEEEcCCccceE----EEEecCCCchhhhhHhhhcCCcccccCCCCeeEEEEEEEE
Confidence 35789999999999843 3223321 11000001110 12346999999999999986
No 34
>4dzg_A PLIG; lysozyme inhibitor, G-type lysozyme binding, hydrolase inhib; HET: MLY; 2.02A {Aeromonas hydrophila subsp}
Probab=63.38 E-value=9.5 Score=32.65 Aligned_cols=44 Identities=16% Similarity=0.191 Sum_probs=25.4
Q ss_pred cccCCCCeEEEEEEeccCCceeEEeCC---------------CCE--Eec-CceEEEEEeCC
Q 007089 560 VHVTAGALQSVRLDIHVCKHLSVVDKF---------------GIR--RIP-MGEHSLHIGDL 603 (618)
Q Consensus 560 v~l~pGes~~V~~~l~~~~~ls~~d~~---------------~~~--~~~-~G~y~i~vG~s 603 (618)
+.+++||+-+|+++-...-.|.+++.+ +.| .++ .|+|+|.|...
T Consensus 34 ~~a~aGQ~l~V~ls~~~~~~f~I~~P~~~~~~~l~~g~~~~~~~~~g~LP~sG~Y~i~V~~~ 95 (114)
T 4dzg_A 34 LVAXAGQTMTVXIGGSSNANFNVFAPGAQPGQAEAIGRNDGDGQWQGALPASGXYLIQVYQM 95 (114)
T ss_dssp CCC-CCCEEEC-CEESTTCEEEEECTTCCTTTSCCSEECCTTSCCEEECSSCC-CEEEEECC
T ss_pred EEecCCCEEEEEeCCCCcEEEEEECCCCCcccceeccccCCcceEEEEecCCCcEEEEEEec
Confidence 346788887777743332234555432 268 554 89999999964
No 35
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=63.22 E-value=13 Score=32.55 Aligned_cols=27 Identities=7% Similarity=-0.049 Sum_probs=20.6
Q ss_pred ccccCCCCeEEEEEEeccCCceeEEeCCCCEEecCceEEEEEe
Q 007089 559 KVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIG 601 (618)
Q Consensus 559 kv~l~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~G~y~i~vG 601 (618)
.+.|.|||+.+++|+.+. +|.|.+++.
T Consensus 98 t~~l~pGet~~v~f~~~~----------------pG~y~f~C~ 124 (139)
T 2aan_A 98 SPLANGNETVEVTFTAPA----------------AGTYLYICT 124 (139)
T ss_dssp CCCBCTTCEEEEEEECCS----------------SEEEEEECC
T ss_pred ccccCCCCEEEEEEECCC----------------CeEEEEEcC
Confidence 345899999999998754 577777664
No 36
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=63.05 E-value=6.3 Score=38.12 Aligned_cols=56 Identities=13% Similarity=0.043 Sum_probs=36.1
Q ss_pred EEeCCCCCcceEEEEeeeCCCCC--CC--------CccccccccccccCCCCeEEEEEEeccCCceeEEeCC
Q 007089 525 IKNTGDMAGTHTLLVFAKPPAGN--WS--------PNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKF 586 (618)
Q Consensus 525 VtNtG~~~G~evvQlY~~~~~~~--~~--------P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ls~~d~~ 586 (618)
+-|-|. |.=+|+||.+.+... .. -.+.+..+.++.|.||||- +|.+.-.-++|-+.
T Consensus 131 iinRgG--G~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESi----Tl~Pg~~H~F~ae~ 196 (246)
T 3kmh_A 131 IINRGG--GNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESI----CLPPGLYHSFWAEA 196 (246)
T ss_dssp EEEEEE--SCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEE----EECTTEEEEEEECT
T ss_pred EEecCC--CeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeE----ecCCCCEEEEEecC
Confidence 355553 567788888876632 11 1467888999999999985 66662223555444
No 37
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=62.71 E-value=15 Score=35.05 Aligned_cols=51 Identities=16% Similarity=0.230 Sum_probs=33.7
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCCCCCCccccccccccccCCCCeEEEEEEecc
Q 007089 518 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHV 576 (618)
Q Consensus 518 ~~~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P~k~L~gF~kv~l~pGes~~V~~~l~~ 576 (618)
..+.+++++|+|+..-. +..+-.+... ..| .+.|-.|+|||+.+++++++.
T Consensus 135 ~~~~~f~i~N~G~~pL~-I~~v~~scgc--t~~-----~~~~~~i~PGe~~~i~v~~~~ 185 (220)
T 2qsv_A 135 TTKAAIEIRNVGAGPLR-LHSVTTRNPA--LTA-----VPDRTEIKPGGSTLLRIAVDP 185 (220)
T ss_dssp CEEEEEEEEECSSSCEE-EEEEEECSTT--EEE-----EESCSEECTTCEEEEEEEECH
T ss_pred eEEEEEEEEECCCCCEE-EEEEEeCCCC--Eee-----ecCCccCCCCCEEEEEEEEec
Confidence 57889999999987621 1111111111 122 255777999999999999987
No 38
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=60.62 E-value=7.5 Score=45.63 Aligned_cols=58 Identities=17% Similarity=0.283 Sum_probs=37.9
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeC--CCCC---CCCccccccc--cccccCCCCeEEEEEEecc
Q 007089 518 SLGLHVDIKNTGDMAGTHTLLVFAKP--PAGN---WSPNKQLIGF--KKVHVTAGALQSVRLDIHV 576 (618)
Q Consensus 518 ~~~v~v~VtNtG~~~G~evvQlY~~~--~~~~---~~P~k~L~gF--~kv~l~pGes~~V~~~l~~ 576 (618)
.++++++|||+|+.+...+.++-+.. |... ..|. .|.-+ +++.|+|||+++++++++.
T Consensus 500 ~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~-~l~~~~~~~vtv~ag~~~~~~vt~~~ 564 (926)
T 1xf1_A 500 KFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPK-VLYETSWQKITIPANSSKQVTVPIDA 564 (926)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEE-EEEECCCEEEEECTTEEEEEEEEEEC
T ss_pred cEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccc-eeEeccCCeEEECCCCEEEEEEEEEc
Confidence 57899999999987654444433322 2221 2343 34322 4578999999999999986
No 39
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=54.14 E-value=25 Score=31.55 Aligned_cols=64 Identities=14% Similarity=0.060 Sum_probs=33.2
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCCCCCCcc-ccccccc--cccCCCC--eEEEEEEeccCCceeEEeCCCCEEecCc
Q 007089 520 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNK-QLIGFKK--VHVTAGA--LQSVRLDIHVCKHLSVVDKFGIRRIPMG 594 (618)
Q Consensus 520 ~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P~k-~L~gF~k--v~l~pGe--s~~V~~~l~~~~~ls~~d~~~~~~~~~G 594 (618)
+|+++++|.|+...-.++..=...+.. .-|.. .+..... ..|.||| +.+++|++ . +|
T Consensus 70 ~V~~~~tN~~~~~~H~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~-~----------------pG 131 (154)
T 2cal_A 70 TVDVTFINTNKGFGHSFDITKKGPPYA-VMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP-T----------------AG 131 (154)
T ss_dssp EEEEEEEECCTTCCCCCEEESCCSCCC-SSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC-C----------------SE
T ss_pred EEEEEEEcCCCCeeeEEEEeecCcchh-ccccccccccccccccccCCCCceEEEEEEEE-C----------------Cc
Confidence 788999998643334443331111111 11110 0111111 1579999 87777777 5 57
Q ss_pred eEEEEEe
Q 007089 595 EHSLHIG 601 (618)
Q Consensus 595 ~y~i~vG 601 (618)
.|.++..
T Consensus 132 tY~y~C~ 138 (154)
T 2cal_A 132 TYYYVCQ 138 (154)
T ss_dssp EEEEECC
T ss_pred eEEEECC
Confidence 7776665
No 40
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=50.85 E-value=68 Score=30.32 Aligned_cols=52 Identities=13% Similarity=0.076 Sum_probs=31.7
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCCCCCCccccccc-cccccCCCCeEEEEEEeccCCce
Q 007089 518 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGF-KKVHVTAGALQSVRLDIHVCKHL 580 (618)
Q Consensus 518 ~~~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P~k~L~gF-~kv~l~pGes~~V~~~l~~~~~l 580 (618)
..+.+++++|+|+..=.=. ++ +.|.- ++.- ....|+|||+.+++++++. ..+
T Consensus 20 ~~~~~~~i~N~g~~pl~i~-~~--~~p~~-------~~~~~~~~~I~PG~~g~I~vt~~~-~~~ 72 (220)
T 2qsv_A 20 EGVVRLVVNNTDESDLQVA-VV--SLPSF-------VSLDDRAFRLQAREPRELNLSLAV-PRN 72 (220)
T ss_dssp CCEEEEEEEECSSSCEEEE-EE--ECCTT-------EECSCCEEEECSSSCEEEEEEECC-CTT
T ss_pred cceEEEEEEeCCCCceEEE-ec--cCCCc-------eEeeeCcceeCCCCceEEEEEEcc-hhc
Confidence 3567999999999762211 11 11110 1110 1145899999999999987 443
No 41
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=50.35 E-value=46 Score=32.36 Aligned_cols=57 Identities=9% Similarity=0.005 Sum_probs=38.0
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCCC-CCCccccccccccccCCCCeEEEEEEecc
Q 007089 518 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIHV 576 (618)
Q Consensus 518 ~~~v~v~VtNtG~~~G~evvQlY~~~~~~~-~~P~k~L~gF~kv~l~pGes~~V~~~l~~ 576 (618)
.+.+.++|-|..+..=+--|+|..++.... ..+... --+++.|+||++++|.|.+.+
T Consensus 97 ~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~~~~~~~~--~~~~v~v~a~~~~~v~f~i~p 154 (252)
T 3hrz_B 97 QVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKGQR--YRQQFPIKALSSRAVPFVIVP 154 (252)
T ss_dssp CEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSSCC--EEEEEEECTTEEEEEEEEEEE
T ss_pred EEEEEEEEEcccCceEEEEEEEEcCCceEeecCCCCc--eEEEEEECCCCeEEEEEEEEe
Confidence 689999999998877555566655432211 111111 113467999999999999987
No 42
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=48.86 E-value=39 Score=34.91 Aligned_cols=55 Identities=15% Similarity=0.032 Sum_probs=33.8
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCC-CCCCCCccccccc-cccccCCCCeEEEEEEecc
Q 007089 518 SLGLHVDIKNTGDMAGTHTLLVFAKPP-AGNWSPNKQLIGF-KKVHVTAGALQSVRLDIHV 576 (618)
Q Consensus 518 ~~~v~v~VtNtG~~~G~evvQlY~~~~-~~~~~P~k~L~gF-~kv~l~pGes~~V~~~l~~ 576 (618)
..+-+++|+|||.+.. +.-+..+ .....+...|.=. .+-.|.|||+.+|++++..
T Consensus 47 ~~~~~l~i~N~g~~pa----~f~f~~~~~~~~~~~~wl~v~p~~g~l~Pge~~~i~l~~~v 103 (366)
T 3qis_A 47 LQKEKFQISNNGQVPC----HFSFIPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYV 103 (366)
T ss_dssp CEEEEEEEEECSSSCE----EEEEECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECB
T ss_pred eEEEEEEEEecCCceE----EEEEEeCCCCCCCCCCcEEEeCCccEECCCCEEEEEEEEEE
Confidence 4688999999999873 3322322 2212111112111 2346999999999999987
No 43
>2xwx_A GBPA, glcnac-binding protein A; chitin-binding protein; 1.80A {Vibrio cholerae}
Probab=44.39 E-value=39 Score=35.30 Aligned_cols=61 Identities=18% Similarity=0.257 Sum_probs=47.8
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCCCCCCccccccccccccCCCCeEEEEEEeccCCceeEEeCCCCEEecCceEE
Q 007089 518 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHS 597 (618)
Q Consensus 518 ~~~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~G~y~ 597 (618)
.+++.++|+=+|++ .|.++|-+.. ++.+++.+..|.-+..+.++++|.. +++|.|.
T Consensus 312 ~~~l~f~~~~~~~~----~v~~~v~d~~------~~~~~~~~~~v~~~~~~~~tl~ls~--------------~~aGhh~ 367 (391)
T 2xwx_A 312 PIQLDLTLEAQGEM----SAELTVYNHH------QKPLASWSQAMTDGELKSITLELSE--------------AKAGHHM 367 (391)
T ss_dssp CCEEEEEEEEESSE----EEEEEEECTT------SCEEEEEEEEECTTCEEEEEEECSC--------------CCSEEEE
T ss_pred cEEEEEEEEecCce----EEEEEEEcCC------CCccceeeEEEcCCCcceEEEEccC--------------CCCccEE
Confidence 46777777766654 4777776654 5788999999999999999999986 6789998
Q ss_pred EEEeC
Q 007089 598 LHIGD 602 (618)
Q Consensus 598 i~vG~ 602 (618)
+.|-.
T Consensus 368 lvv~~ 372 (391)
T 2xwx_A 368 LVSRI 372 (391)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87653
No 44
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=42.93 E-value=36 Score=27.66 Aligned_cols=49 Identities=24% Similarity=0.291 Sum_probs=30.5
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCCCCCCccccccccccccCCCCeEEEEEEeccCCceeEEeCCCCEEecCceEEEE
Q 007089 520 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLH 599 (618)
Q Consensus 520 ~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~G~y~i~ 599 (618)
+|++.++|.|... +-+.+ .. + ..+..|.||++.+++|+.+. +|.|.++
T Consensus 37 tV~~~~~n~d~~~--H~~~~--~~----------~--~~~~~~~pg~~~~~~~t~~~----------------~G~Y~y~ 84 (100)
T 4hci_A 37 STTLLLKNKGKSE--HTFTI--KK----------L--GIDVVVESGKEKNITVKPKS----------------AGTYELI 84 (100)
T ss_dssp CEEEEEEECSSSC--EEEEE--GG----------G--TEEEEECTTCEEEEEECCCS----------------CEEEEEE
T ss_pred EEEEEEEcCCCce--EEEEE--ec----------C--CcceeecCCcceeEEEeccc----------------CceEEEE
Confidence 5777788988654 11111 10 0 11345899999988887654 6777776
Q ss_pred E
Q 007089 600 I 600 (618)
Q Consensus 600 v 600 (618)
.
T Consensus 85 C 85 (100)
T 4hci_A 85 C 85 (100)
T ss_dssp C
T ss_pred C
Confidence 5
No 45
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=42.22 E-value=23 Score=29.52 Aligned_cols=41 Identities=12% Similarity=0.293 Sum_probs=26.3
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCCCCCCccccccccccccCCCCeEEEEEEecc
Q 007089 520 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHV 576 (618)
Q Consensus 520 ~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P~k~L~gF~kv~l~pGes~~V~~~l~~ 576 (618)
+|++.++|.+.. -+-+. + | .+ |+ +..+.|||+.+++|+.+.
T Consensus 47 ~V~~~~~n~d~~--~H~~~--i--~--------~~-~~-~~~i~pG~~~~~~f~~~~ 87 (112)
T 1iby_A 47 AVKVVVENKSPI--SEGFS--I--D--------AF-GV-QEVIKAGETKTISFTADK 87 (112)
T ss_dssp EEEEEEEECSSS--CEEEE--E--G--------GG-TE-EEEECTTCEEEEEEECCS
T ss_pred EEEEEEEECCCC--eEEEE--E--c--------CC-Cc-eeEeCCCCEEEEEEECCC
Confidence 688888999864 11111 1 1 11 22 566899999999998654
No 46
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=41.69 E-value=61 Score=31.72 Aligned_cols=54 Identities=11% Similarity=0.111 Sum_probs=35.2
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCCCCCCcc---cccccccc-ccCCCCeEEEEEEec
Q 007089 520 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNK---QLIGFKKV-HVTAGALQSVRLDIH 575 (618)
Q Consensus 520 ~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P~k---~L~gF~kv-~l~pGes~~V~~~l~ 575 (618)
.++++|+|+|+. --.||..+.+......|.+ .+.--=-+ .|+||++++|+|...
T Consensus 45 ~~sl~l~N~~~~--P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl~pg~~q~lRI~~~ 102 (257)
T 3q48_A 45 EVTLRVSNTSGT--PVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEPNGGAVLRIAYL 102 (257)
T ss_dssp EEEEEEEECSSS--CEEEEEEEESSCCSSCGGGGCCSEEEESSEEEECTTEEEEEEEEEC
T ss_pred EEEEEEEeCCCC--eEEEEEEEEcCCCccCcccccCCEEEcCCEEEECCCCceEEEEEEC
Confidence 689999999986 5899999986432211211 01111112 389999999999543
No 47
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=40.98 E-value=21 Score=41.26 Aligned_cols=51 Identities=20% Similarity=0.198 Sum_probs=31.2
Q ss_pred EEEEEEEEeCCCCCcceEEEEeeeCCCCCCCCcc---ccc--cc-------cccccCCCCeEEEEEE
Q 007089 519 LGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNK---QLI--GF-------KKVHVTAGALQSVRLD 573 (618)
Q Consensus 519 ~~v~v~VtNtG~~~G~evvQlY~~~~~~~~~P~k---~L~--gF-------~kv~l~pGes~~V~~~ 573 (618)
-.++++|||||+|. +|+=-....-...|.- +.+ || .-|..+|||+|+|++.
T Consensus 151 ~~~~~~v~~~~~r~----~~v~sh~hf~e~n~~l~fdr~~~~g~rl~~~~g~~~rf~pg~~~~v~l~ 213 (840)
T 4gy7_A 151 KAVILKVTSKGDRP----IQVGSHYHFIEVNPYLTFDRRKAYGMRLNIAAGTAVRFEPGDCKSVTLV 213 (840)
T ss_dssp EEEEEEEEECCSSC----EEEETTSCGGGSCTTEEBCHHHHTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred ceEEEEEEeCCCCc----eEeccccchhhcCcccccchhhhccccccccCCCceeeCCCCeeEEEEE
Confidence 47999999999999 7873222211111110 011 11 3466799999999985
No 48
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=40.26 E-value=65 Score=30.66 Aligned_cols=53 Identities=19% Similarity=0.118 Sum_probs=35.1
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCCC---CCCccccccccccccCCCCeEEEEEEecc
Q 007089 520 GLHVDIKNTGDMAGTHTLLVFAKPPAGN---WSPNKQLIGFKKVHVTAGALQSVRLDIHV 576 (618)
Q Consensus 520 ~v~v~VtNtG~~~G~evvQlY~~~~~~~---~~P~k~L~gF~kv~l~pGes~~V~~~l~~ 576 (618)
.++++|+|+|+.. -.||..+.+.... ..|.--.=-. ..|+||+.++|+|....
T Consensus 29 ~~sl~l~N~~~~p--~LvQswv~~~~~~~~~~~pFivtPPl--~Rl~p~~~q~lRI~~~~ 84 (218)
T 4ay0_A 29 GVMVSVKNTQDYP--VLIQSRIYDENKEKESEDPFVVTPPL--FRLDAKQQNSLRIAQAG 84 (218)
T ss_dssp CEEEEEECCSSSC--EEEEEEEECTTSCCCSSCSEEEESSE--EEECTTCEEEEEEEECS
T ss_pred EEEEEEEcCCCCC--EEEEEEEecCCCCccccCCEEECCCe--EEeCCCCceEEEEEecC
Confidence 5889999999764 7999999764332 2221111111 24899999999996543
No 49
>2lv4_A Putative outer membrane or exported protein; antivirulence, adhesion, protein binding; NMR {Salmonella enterica subsp}
Probab=39.03 E-value=78 Score=27.31 Aligned_cols=65 Identities=11% Similarity=0.139 Sum_probs=42.3
Q ss_pred CccccccccccccCCCCeEEEEEEeccCCc------------eeEEeCCCCE-------EecCceEEE---EEeCCCCeE
Q 007089 550 PNKQLIGFKKVHVTAGALQSVRLDIHVCKH------------LSVVDKFGIR-------RIPMGEHSL---HIGDLKHSI 607 (618)
Q Consensus 550 P~k~L~gF~kv~l~pGes~~V~~~l~~~~~------------ls~~d~~~~~-------~~~~G~y~i---~vG~ss~~~ 607 (618)
|--.+..-.|..|-||||.+|++-+.- -+ ...++-.|.| -..||+|.= +-|.|+..|
T Consensus 48 pDLtvisiDk~vL~PGESA~it~IvKD-id~nPIn~v~i~~~~~~~~~~g~Wd~g~~Kkg~~PGeY~q~iTY~G~s~~~i 126 (146)
T 2lv4_A 48 PDLTVMSIDKSVLSPGESATITTIVKD-IDGNPVNEVHINKTVARENLKGLWDYGPLKKENVPGKYTQVITYRGHSNERI 126 (146)
T ss_dssp GGGCEEECCCCCBCTTCEEEEEEECBB-TTSCBCCCCCCBCCEECSCSSSEEEECCCEECSSSSEEEEEEEEETTCCCEE
T ss_pred CCcEEEecCccccCCCcceEEEEEEEe-CCCCcccceeeeeeeeccccccceeecceecCCCCcceEEEEEEcCCCCceE
Confidence 444566677888999999999997543 11 1111122344 245999975 457888888
Q ss_pred EEEEEEcc
Q 007089 608 SLQANLEG 615 (618)
Q Consensus 608 ~~~~~~~~ 615 (618)
.+..+--|
T Consensus 127 ~l~yky~g 134 (146)
T 2lv4_A 127 DISFKYAM 134 (146)
T ss_dssp EEEEECST
T ss_pred EEEeeeee
Confidence 88776554
No 50
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=37.93 E-value=70 Score=30.49 Aligned_cols=52 Identities=12% Similarity=0.111 Sum_probs=34.4
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCCC-CCCccccccccccccCCCCeEEEEEEec
Q 007089 520 GLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIH 575 (618)
Q Consensus 520 ~v~v~VtNtG~~~G~evvQlY~~~~~~~-~~P~k~L~gF~kv~l~pGes~~V~~~l~ 575 (618)
.++++|+|+|+. --.||..+.+.... ..|.--+=-. ..|+||++++|+|...
T Consensus 29 ~~sl~l~N~~~~--p~LvQsWv~~~~~~~~~pfivtPPl--~rl~p~~~q~lRI~~~ 81 (221)
T 2co7_B 29 GATLSVSNPQNY--PILVQSSVKAADKSSPAPFLVMPPL--FRLEANQQSQLRIVRT 81 (221)
T ss_dssp CEEEEEECCSSS--CEEEEEEEEETTSSSBCSEEEESSE--EEECTTCEEEEEEEEC
T ss_pred EEEEEEEcCCCC--cEEEEEEEecCCCCccCCEEEeCCE--EEECCCCceEEEEEEC
Confidence 578899999976 67999999764332 1221111111 2489999999999654
No 51
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=36.16 E-value=52 Score=30.64 Aligned_cols=54 Identities=22% Similarity=0.268 Sum_probs=35.1
Q ss_pred cchHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHH-----hcCCCEEEEEEcCc
Q 007089 315 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK-----ASRGPVVLVLMCGG 379 (618)
Q Consensus 315 ~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~-----~~~k~vVvVl~~g~ 379 (618)
+...+..+..+.||.+|++.-.. +..+|+.-..+|+.+.. -.+||+.++..+|+
T Consensus 62 ~~~~~~~~~i~~AD~iVi~tP~Y-----------~~s~p~~LK~~iD~~~~~~~~~l~gK~v~~v~tsgg 120 (199)
T 4hs4_A 62 APVLTMAQQIATADAVVIVTPEY-----------NYSVPGVLKNAIDWLSRVSPQPLAGKPVALVTASPG 120 (199)
T ss_dssp HHHHHHHHHHHHSSEEEEEECCB-----------TTBCCHHHHHHHHHHTTSSSCTTTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCEEEEEcCcc-----------CCCcCHHHHHHHHHhcccCCcccCCCEEEEEEeCCC
Confidence 34566778889999999976322 35678888888888753 12455555544433
No 52
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=35.03 E-value=84 Score=36.57 Aligned_cols=57 Identities=11% Similarity=0.007 Sum_probs=40.4
Q ss_pred eEEEEEEEEeCCC-CCcceEEEEeeeCCCCC-CCCccccccccccccCCCCeEEEEEEecc
Q 007089 518 SLGLHVDIKNTGD-MAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIHV 576 (618)
Q Consensus 518 ~~~v~v~VtNtG~-~~G~evvQlY~~~~~~~-~~P~k~L~gF~kv~l~pGes~~V~~~l~~ 576 (618)
.+.+.++|.|..+ .+++-.|+|..+.+... ..+. ...=+++.|+||++++|.|.|.+
T Consensus 96 ~~~i~~~v~N~~~~~~~~v~v~l~~~~~~~~~~~~~--~~~~~~v~l~~~~~~~v~f~i~~ 154 (915)
T 2hr0_B 96 QVEIRAVLYNYRQNQELKVRVELLHNPAFCSLATTK--RRHQQTVTIPPKSSLSVPYVIVP 154 (915)
T ss_dssp CEEEEEEEEECCSSCCEEEEEEECCCTTEECSCCSS--SCEEEEEEECTTEEEEEEEEEEE
T ss_pred EEEEEEEEEcCCCCeeEEEEEEEecCCceEeecCCC--CcceeEEEECCCCeEEEEEEEEE
Confidence 6899999999999 88887777765443221 1110 01114578999999999999987
No 53
>4g9s_B Inhibitor of G-type lysozyme, goose-type lysozyme; hydrolase inhibitor, hydrolase-hydrolase inhibitor; HET: FLC; 0.95A {Escherichia coli} PDB: 4dy3_A* 4dxz_A* 4dy5_A
Probab=34.53 E-value=76 Score=26.55 Aligned_cols=12 Identities=25% Similarity=0.498 Sum_probs=9.9
Q ss_pred Eec-CceEEEEEe
Q 007089 590 RIP-MGEHSLHIG 601 (618)
Q Consensus 590 ~~~-~G~y~i~vG 601 (618)
.|+ .|+|+|.|.
T Consensus 78 ~LP~sG~Y~I~V~ 90 (111)
T 4g9s_B 78 SLPASGKYELRVL 90 (111)
T ss_dssp ECSSSEEEEEEEE
T ss_pred EecCCccEEEEEE
Confidence 454 899999995
No 54
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=34.39 E-value=87 Score=30.23 Aligned_cols=52 Identities=10% Similarity=0.010 Sum_probs=33.9
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCCC-CCCccccccccccccCCCCeEEEEEEec
Q 007089 520 GLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIH 575 (618)
Q Consensus 520 ~v~v~VtNtG~~~G~evvQlY~~~~~~~-~~P~k~L~gF~kv~l~pGes~~V~~~l~ 575 (618)
.++++|+|+|+. --.||..+.+.... ..|.--.=-. ..|+||+.++|+|...
T Consensus 39 ~~sl~l~N~~~~--P~LvQsWv~~~~~~~~~pfivtPPl--fRlep~~~q~lRIi~~ 91 (239)
T 4djm_A 39 GETLTVINDQDY--PMLVQSEVLSEDQKSPAPFVVTPPL--FRLDGQQSSRLRIVRT 91 (239)
T ss_dssp CEEEEEEECSSS--CEEEEEEEECTTSSSBCSEEEESSE--EEECTTEEEEEEEEEC
T ss_pred EEEEEEEeCCCC--cEEEEEEEEcCCCCccCCEEEcCCe--EEECCCCceEEEEEEC
Confidence 478899999976 47999999864322 1221111111 2489999999999643
No 55
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=31.70 E-value=65 Score=29.74 Aligned_cols=55 Identities=11% Similarity=0.073 Sum_probs=38.3
Q ss_pred cchHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHH---------------hcCCCEEEEEEcCc
Q 007089 315 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK---------------ASRGPVVLVLMCGG 379 (618)
Q Consensus 315 ~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~---------------~~~k~vVvVl~~g~ 379 (618)
..+.+..+....||.+|++.=.. ...+|+.-..+|+.+.. -.+|+++++..+|+
T Consensus 62 ~~~~~~~~~l~~AD~iV~~~P~y-----------~~~~pa~LK~~iD~v~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~ 130 (196)
T 3lcm_A 62 AEMEKYRDLVTWADHLIFIFPIW-----------WSGMPAILKGFIDRVFVADFAYSYKKVGLEGHLQGKSAWIITTHNT 130 (196)
T ss_dssp GGGHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHSCBTTTEEECSSSEEESCTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCEEEEECchh-----------hccccHHHHHHHHHHccCCcceecCCCCcccCCCCCEEEEEEcCCC
Confidence 44567778889999999875221 35678877888888742 13577777777777
Q ss_pred e
Q 007089 380 P 380 (618)
Q Consensus 380 P 380 (618)
|
T Consensus 131 ~ 131 (196)
T 3lcm_A 131 P 131 (196)
T ss_dssp C
T ss_pred c
Confidence 7
No 56
>3gee_A MNME, tRNA modification GTPase MNME; G protein, cytoplasm, GTP- binding, hydrolase, magnesium, metal-binding, nucleotide- binding, potassium; HET: GDP FON; 2.95A {Chlorobium tepidum} PDB: 3gei_A*
Probab=31.54 E-value=57 Score=34.95 Aligned_cols=102 Identities=15% Similarity=0.067 Sum_probs=60.0
Q ss_pred HHHcCCCceEEecccCCCC-----cccccCHHHHHHHHHhhcCCCcEEEccchhhh-hccccccccCCHHHHHHHHHHH-
Q 007089 102 CVVEGKVASVMCSYNQVNG-----KPTCADPDILKNTIHGQWRLDGYIVSDCDSVG-VLYNTQHYTRTPEEAAADAIKA- 174 (618)
Q Consensus 102 ai~~g~~~~vM~sy~~vng-----~pa~~s~~ll~~lLR~e~gf~G~ViSD~~~~~-~~~~~~~~~~~~~~a~~~al~a- 174 (618)
.|+++ ...+|.+.+++.| ..|+.++.+++.+|+.=+. .|.-+...++.- ..+-+.+...+..||+..-|.|
T Consensus 76 ~iD~~-l~~~f~~P~s~TgEd~~E~~~HGg~~v~~~~l~~~~~-~g~r~A~pGEFt~RAflngk~dL~qaEav~dli~a~ 153 (476)
T 3gee_A 76 MVDEV-IALVFRAPRSFTAEQMVEFTCHGGPVVVGRVLRLMLD-NGCRLAEPGEFTRRAFLNGRIDLLQAEAIGEMIHAR 153 (476)
T ss_dssp EEEEE-EEEEEBTTBSSSSSCEEEEEEECCHHHHHHHHHHHHH-TTCEECCTTHHHHHHHHTTSSCHHHHHHHHHHHHCC
T ss_pred ccceE-EEEEecCCCCCCCCCeEEEECCCCHHHHHHHHHHHHH-CCCeecCCcchhhhhhccCcCcHHHHHHHHHHHhCC
Confidence 45555 6678999888877 4799999988888875433 366676666522 2222334444456666666666
Q ss_pred -HHHHHHHHH--CCCCCHHHHHHHHhhhHHHHHHh
Q 007089 175 -AIHTEGAVR--GGLLREEDVNLALAYTITVQMRL 206 (618)
Q Consensus 175 -~~~l~~av~--~G~i~~~~ld~av~RiL~~k~~l 206 (618)
-.....|++ +|.+ ..++++-..+++++...+
T Consensus 154 t~~~~~~a~~~l~G~l-s~~i~~lr~~L~~~~a~i 187 (476)
T 3gee_A 154 TESAYRTAVSQMKGDL-SVRLGGLREQLIRSCALI 187 (476)
T ss_dssp SHHHHHHHHHHHHTHH-HHHHHHHHTHHHHHHHTT
T ss_pred CHHHHHHHHHhhCCcH-HHHHHHHHHHHHHHHHHh
Confidence 222233332 2544 344666666666665444
No 57
>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*
Probab=28.39 E-value=52 Score=37.43 Aligned_cols=55 Identities=20% Similarity=0.045 Sum_probs=41.2
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCCC-CCCccccccccccccCCCCeEEEEEEecc
Q 007089 518 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIHV 576 (618)
Q Consensus 518 ~~~v~v~VtNtG~~~G~evvQlY~~~~~~~-~~P~k~L~gF~kv~l~pGes~~V~~~l~~ 576 (618)
.+.+.++|.|..+...+-.|+|-..++... ..+.+ -+++.|+||++++|.|.|.+
T Consensus 169 ~~~i~~~V~N~~~~~~~v~v~l~~~~~~~~~~~~~~----~~~~~v~a~~~~~v~f~i~~ 224 (767)
T 4fxk_B 169 QLELRPVLYNYLDKNLTVSVHVSPVEGLCLAGGGGL----AQQVLVPAGSARPVAFSVVP 224 (767)
T ss_dssp EEEECCEEEECSSSCEEEEEEECCCTTEECSSSSCC----CEEEEECSSCEEECCEEEEE
T ss_pred EEEEEEEEEECCCCCEEEEEEEEecCCeEEecCCce----eEEEEEcCCCeEEEEEEEEE
Confidence 799999999999998888888876554322 11111 13567999999999999976
No 58
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=27.51 E-value=65 Score=30.15 Aligned_cols=54 Identities=19% Similarity=0.175 Sum_probs=35.9
Q ss_pred hHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHHh---------------cCCCEEEEEEcCcee
Q 007089 317 IGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKA---------------SRGPVVLVLMCGGPV 381 (618)
Q Consensus 317 ~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~~---------------~~k~vVvVl~~g~P~ 381 (618)
..+..+....||.+|++.-.. ...+|..-..+|+.+... .+|+++++..+|+|+
T Consensus 83 ~~~~~~~~~~aD~iv~~~P~y-----------~~~~p~~lK~~iD~~~~~~~~~~~~~~g~~g~l~gK~~~~i~t~g~~~ 151 (211)
T 3p0r_A 83 ADKYLNQFLEADKVVFGFPLW-----------NLTIPAVLHTYIDYLNRAGKTFKYTPEGPVGLIGDKKIALLNARGGVY 151 (211)
T ss_dssp HHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHCCBTTTEECCTTCCEESCTTCEEEEEEEESSCC
T ss_pred HHHHHHHHHhCCEEEEEcChh-----------cccCCHHHHHHHHHHhccCceeccCCCCCccCCCCCEEEEEEeCCCCC
Confidence 456667788999999875321 356777777888877421 246666666667664
No 59
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=26.75 E-value=64 Score=36.16 Aligned_cols=57 Identities=12% Similarity=-0.053 Sum_probs=42.3
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCC--CCCCcccccccc--ccccCCCCeEEEEEEecc
Q 007089 518 SLGLHVDIKNTGDMAGTHTLLVFAKPPAG--NWSPNKQLIGFK--KVHVTAGALQSVRLDIHV 576 (618)
Q Consensus 518 ~~~v~v~VtNtG~~~G~evvQlY~~~~~~--~~~P~k~L~gF~--kv~l~pGes~~V~~~l~~ 576 (618)
.+.|+++++|..+.. ..|+++++.-.- .+.+..++..-. .+.|.|+|+++|.++|..
T Consensus 488 df~v~v~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~~l~p~~~~~v~~~i~y 548 (687)
T 2q3z_A 488 DFDVFAHITNNTAEE--YVCRLLLCARTVSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILY 548 (687)
T ss_dssp CEEEEEEEEECSSSC--EEEEEEEEEEEECTTCCEEEEEEEEEEEEEEECTTEEEEEEEEECH
T ss_pred CEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCcccceEeeeeeeEEEECCCceEEEEEEECH
Confidence 589999999999876 678888776332 256665552222 356999999999999986
No 60
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=26.65 E-value=21 Score=36.71 Aligned_cols=56 Identities=18% Similarity=0.278 Sum_probs=31.3
Q ss_pred HHhhcCCEEEEEecCCcccccccCCCCCCCCChhH----HHHHHHHHHhcCCCEEEEEEcCceeec
Q 007089 322 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ----QELVSRVAKASRGPVVLVLMCGGPVDV 383 (618)
Q Consensus 322 ~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q----~~Li~~v~~~~~k~vVvVl~~g~P~~l 383 (618)
++.+++|+||++.|..+ .+|.+|.+|- ..- .++.+++.+.+.+.++|++. ++|++.
T Consensus 96 ~a~~~advVvi~aG~pr---kpGmtR~DLl--~~Na~I~~~~~~~i~~~a~~~~~vlvv-sNPvd~ 155 (345)
T 4h7p_A 96 VAFDGVAIAIMCGAFPR---KAGMERKDLL--EMNARIFKEQGEAIAAVAASDCRVVVV-GNPANT 155 (345)
T ss_dssp HHTTTCSEEEECCCCCC---CTTCCHHHHH--HHHHHHHHHHHHHHHHHSCTTCEEEEC-SSSHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCCHHHHH--HHhHHHHHHHHHHHHhhccCceEEEEe-CCCcch
Confidence 45689999999888653 3454554431 111 23444555533334444444 699875
No 61
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=26.27 E-value=16 Score=36.65 Aligned_cols=56 Identities=14% Similarity=0.305 Sum_probs=32.6
Q ss_pred HhhcCCEEEEEecCCcccccccCCCCCCCC-Chh-HHHHHHHHHHhcCCCEEEEEEcCceeec
Q 007089 323 AARQADATVLVMGLDQSIEAEFIDRAGLLL-PGR-QQELVSRVAKASRGPVVLVLMCGGPVDV 383 (618)
Q Consensus 323 ~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L-p~~-q~~Li~~v~~~~~k~vVvVl~~g~P~~l 383 (618)
..+.||+||++.|..+ ..|.+|.+|-- +.. -.++++++++.+++ .++++. .+|++.
T Consensus 66 ~~~~aDvVvitAG~pr---kpGmtR~dLl~~Na~I~~~i~~~i~~~~p~-aivlvv-sNPvd~ 123 (294)
T 2x0j_A 66 LLKGSEIIVVTAGLAR---KPGMTRLDLAHKNAGIIKDIAKKIVENAPE-SKILVV-TNPMDV 123 (294)
T ss_dssp GGTTCSEEEECCCCCC---CSSSCHHHHHHHHHHHHHHHHHHHHTTSTT-CEEEEC-SSSHHH
T ss_pred HhCCCCEEEEecCCCC---CCCCchHHHHHHHHHHHHHHHHHHHhcCCc-eEEEEe-cCcchh
Confidence 4679999999988654 34445544310 000 12455666665544 444444 589986
No 62
>1klf_A FIMC chaperone, chaperone protein FIMC; adhesin-chaperone complex, mannose-bound, chaperone/adhesin complex complex; HET: MAN; 2.79A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1 PDB: 1kiu_A* 3rfz_C 1qun_A 1bf8_A 1ze3_C 3bwu_C 3jwn_C
Probab=26.16 E-value=1.1e+02 Score=28.59 Aligned_cols=52 Identities=8% Similarity=0.032 Sum_probs=33.7
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCCC-CCCccccccccccccCCCCeEEEEEEe
Q 007089 520 GLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDI 574 (618)
Q Consensus 520 ~v~v~VtNtG~~~G~evvQlY~~~~~~~-~~P~k~L~gF~kv~l~pGes~~V~~~l 574 (618)
.++++|+|+|+. ---.||..+.+.... ..|.--+=-. ..|+||++++|+|..
T Consensus 17 ~~sl~l~N~~~~-~p~LvQsWi~~~~~~~~~pfivtPPl--~rl~p~~~q~lRI~~ 69 (205)
T 1klf_A 17 QVQLAVTNNDEN-STYLIQSWVENADGVKDGRFIVTPPL--FAMKGKKENTLRILD 69 (205)
T ss_dssp EEEEEEEECCSS-CCEEEEEEEEETTSCCCSSEEEESSE--EEECSSEEEEEEEEE
T ss_pred EEEEEEEcCCCC-CcEEEEEEEecCCCCccCCEEEcCCe--EEECCCCceEEEEEe
Confidence 689999999943 146899999764322 2221111111 248999999999976
No 63
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=25.83 E-value=1.2e+02 Score=36.67 Aligned_cols=62 Identities=16% Similarity=0.129 Sum_probs=42.5
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCCC--CCCccccccccccccCCCCeEEEEEEeccCCce
Q 007089 518 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN--WSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHL 580 (618)
Q Consensus 518 ~~~v~v~VtNtG~~~G~evvQlY~~~~~~~--~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~l 580 (618)
.+.+.++|.|..+.+++--|+|....+.-. ..+.+....=+++.|++|++++|.|.|.+ ..+
T Consensus 681 ~~~l~~~v~N~~~~~~~v~v~l~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~v~f~i~~-~~~ 744 (1325)
T 2pn5_A 681 AVVLQFTLFNNLGAEYIADVTLYNVANQTEFVGRPNTDLSYTKSVSVPPKVGVPISFLIKA-RKL 744 (1325)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEECGGGCEEETTSCTTCCEEEEEEEECTTCCEEEEEEEEE-CSS
T ss_pred EEEEEEEEEeCCCCcEEEEEEEeecCCceEEeccCCCCCcceEEEEECCCCeEEEEEEEEE-ccc
Confidence 789999999999999888888865532111 11111111114578999999999999987 444
No 64
>1rli_A Trp repressor binding protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bacillus subtilis} SCOP: c.23.5.6
Probab=25.15 E-value=1.1e+02 Score=27.30 Aligned_cols=54 Identities=9% Similarity=0.057 Sum_probs=33.2
Q ss_pred chHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHH-------------hcCCCEEEEEEcCce
Q 007089 316 LIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK-------------ASRGPVVLVLMCGGP 380 (618)
Q Consensus 316 ~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~-------------~~~k~vVvVl~~g~P 380 (618)
.+++..+...+||.+|++.-.. ...+|..-..+|+.+.. -.+|+++++...|+|
T Consensus 61 ~~~~~~~~l~~aD~ii~~~P~y-----------~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~~ 127 (184)
T 1rli_A 61 DYDSIIERILQCHILIFATPIY-----------WFGMSGTLKLFIDRWSQTLRDPRFPDFKQQMSVKQAYVIAVGGDN 127 (184)
T ss_dssp CHHHHHHHHHTCSEEEEEEECB-----------TTBCCHHHHHHHHTHHHHTTCTTSTTHHHHHHTSEEEEEEEESSC
T ss_pred CHHHHHHHHHhCCEEEEEeCcc-----------ccCCcHHHHHHHHHhHHhccCccccccccccCCCeEEEEEeCCCC
Confidence 3556667788999999965321 23567766677776531 135666666555543
No 65
>1g43_A Scaffolding protein; beta-sandwich, structural protein; 2.20A {Clostridium cellulolyticum} SCOP: b.2.2.2
Probab=25.02 E-value=26 Score=31.80 Aligned_cols=34 Identities=12% Similarity=0.108 Sum_probs=27.6
Q ss_pred ccccc--cccCCCCeEEEEEEeccCCceeEEeCCCCE
Q 007089 555 IGFKK--VHVTAGALQSVRLDIHVCKHLSVVDKFGIR 589 (618)
Q Consensus 555 ~gF~k--v~l~pGes~~V~~~l~~~~~ls~~d~~~~~ 589 (618)
.+|.. ..|.||++.+|.|.+.. .+++.||....|
T Consensus 97 I~F~~~ag~l~pg~s~eiq~ri~~-~dws~~dqsNDy 132 (160)
T 1g43_A 97 VALNSDAGSLPAGGSIEIQTRFAR-NDWSNFDQSNDW 132 (160)
T ss_dssp EEECTTSCEECTTCEEEEEEEEEE-TTCCCEEGGGCT
T ss_pred EEecCCcceECCCCcEEEEEEEec-CCCCcccccCCc
Confidence 46765 67999999999999998 888889875443
No 66
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=24.76 E-value=77 Score=29.15 Aligned_cols=37 Identities=19% Similarity=0.179 Sum_probs=26.4
Q ss_pred hHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHH
Q 007089 317 IGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVA 364 (618)
Q Consensus 317 ~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~ 364 (618)
+++..+....||.+|++.=.. ...+|+.-..+|+.+.
T Consensus 85 ~~~~~~~l~~aD~iv~~~P~y-----------~~~~pa~lK~~iD~~~ 121 (208)
T 2hpv_A 85 FNELTDQFLSADKVVIANPMW-----------NLNVPTRLKAWVDTIN 121 (208)
T ss_dssp HHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCEEEEEeccc-----------cCCCCHHHHHHHHHHh
Confidence 455667788999999865221 3467887788888875
No 67
>1l4i_A SFAE protein; periplasmic chaperone, immunoglobulin fold; 2.20A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1
Probab=24.41 E-value=1.1e+02 Score=28.64 Aligned_cols=51 Identities=8% Similarity=0.094 Sum_probs=32.8
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCCC-CCCccccccccccccCCCCeEEEEEE
Q 007089 520 GLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLD 573 (618)
Q Consensus 520 ~v~v~VtNtG~~~G~evvQlY~~~~~~~-~~P~k~L~gF~kv~l~pGes~~V~~~ 573 (618)
.++++|+|+|+- ---.||..+.+.... ..|.--+=-. ..|+||++++|+|.
T Consensus 17 ~~sl~l~N~~~~-~p~LvQsWv~~~~~~~~~pfivtPPl--~rl~p~~~q~lRI~ 68 (206)
T 1l4i_A 17 QVQLAVTNNDDK-SSYLIQSWIENAEGKKDARFVITPPL--FSMQGKKENTLRII 68 (206)
T ss_dssp EEEEEEEECCTT-CEEEEEEEEEETTSCBCSSEEEESSE--EEEESSEEEEEEEE
T ss_pred EEEEEEEeCCCC-ccEEEEEEEecCCCCccCCEEEcCCe--EEECCCCceEEEEE
Confidence 689999999952 257899999763221 2221111111 24789999999997
No 68
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=24.12 E-value=47 Score=33.82 Aligned_cols=58 Identities=19% Similarity=0.312 Sum_probs=32.7
Q ss_pred HHhhcCCEEEEEecCCcccccccCCCCCCCC-C-hhHHHHHHHHHHhcCCCEEEEEEcCceeec
Q 007089 322 VAARQADATVLVMGLDQSIEAEFIDRAGLLL-P-GRQQELVSRVAKASRGPVVLVLMCGGPVDV 383 (618)
Q Consensus 322 ~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L-p-~~q~~Li~~v~~~~~k~vVvVl~~g~P~~l 383 (618)
+..+++|+||++.|... .+|.+|.++-- + .--.++++++.+.+.+-+++++. ++|+++
T Consensus 75 ~~~~daDvVvitAg~pr---kpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivv-sNPvd~ 134 (333)
T 5mdh_A 75 IAFKDLDVAILVGSMPR---RDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVV-GNPANT 134 (333)
T ss_dssp HHTTTCSEEEECCSCCC---CTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEEC-SSSHHH
T ss_pred HHhCCCCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEc-CCchHH
Confidence 45679999999877543 34556654310 0 11234566666654433334434 589887
No 69
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=24.06 E-value=97 Score=28.02 Aligned_cols=36 Identities=11% Similarity=0.206 Sum_probs=24.9
Q ss_pred HHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHH
Q 007089 318 GAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVA 364 (618)
Q Consensus 318 ~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~ 364 (618)
.+..+....||.+|++.-. + ...+|+.-..+|+.+.
T Consensus 78 ~~~~~~l~~aD~iv~~~P~---y--------~~~~p~~lK~~iD~~~ 113 (201)
T 1t5b_A 78 DELIAELKAHDVIVIAAPM---Y--------NFNIPTQLKNYFDLIA 113 (201)
T ss_dssp HHHHHHHHHCSEEEEECCC---B--------TTBCCHHHHHHHHHHC
T ss_pred HHHHHHHHhCCEEEEEeCc---c--------cCcCCHHHHHHHHHhe
Confidence 4455677899999986522 1 3456777778888875
No 70
>3ha2_A NADPH-quinone reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics, consortium, NESG; HET: MSE; 1.80A {Pediococcus pentosaceus atcc 25745}
Probab=23.83 E-value=1.2e+02 Score=27.71 Aligned_cols=57 Identities=14% Similarity=0.089 Sum_probs=39.3
Q ss_pred ccchHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHH----------hcCCCEEEEEEcCcee
Q 007089 314 NQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK----------ASRGPVVLVLMCGGPV 381 (618)
Q Consensus 314 ~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~----------~~~k~vVvVl~~g~P~ 381 (618)
..++++..+....||.+|+..=.. .+.+|+.-..+|+.+.. -.+|+++++..+|+|-
T Consensus 39 ~~D~~~~~~~l~~aD~iV~~~P~y-----------~~~~pa~lK~~iDrv~~~g~~~~~~~~l~gK~~~~~~t~g~~~ 105 (177)
T 3ha2_A 39 DFNVEQEQSLLLQNDRIILEFPLY-----------WYSAPALLKQWMDTVMTTKFATGHQYALEGKELGIVVSTGDNG 105 (177)
T ss_dssp TCCHHHHHHHHHTCSEEEEEEECB-----------TTBCCHHHHHHHHHHSCHHHHSTTTCTTTTCEEEEEEEESSCG
T ss_pred cccHHHHHHHHHhCCEEEEECChh-----------hccCCHHHHHHHHHHhhcccccCCCcCCCCCEEEEEEeCCCCh
Confidence 345677788899999999865221 34667777778777632 1357777777778775
No 71
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=23.70 E-value=67 Score=26.05 Aligned_cols=18 Identities=17% Similarity=0.274 Sum_probs=13.9
Q ss_pred ccccccCCCCeEEEEEEe
Q 007089 557 FKKVHVTAGALQSVRLDI 574 (618)
Q Consensus 557 F~kv~l~pGes~~V~~~l 574 (618)
|..+.|.|||+.+++|+.
T Consensus 62 ~~~~~~~pG~~~~~~f~~ 79 (106)
T 2gim_A 62 HKQLLMSPGQSTSTTFPA 79 (106)
T ss_dssp BCSCCCSTTCEEEEECCT
T ss_pred ccceeeCCCCEEEEEEec
Confidence 456679999998887754
No 72
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=23.67 E-value=88 Score=29.62 Aligned_cols=38 Identities=13% Similarity=0.308 Sum_probs=26.9
Q ss_pred hHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHH
Q 007089 317 IGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK 365 (618)
Q Consensus 317 ~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~ 365 (618)
..+..+....||.+|+..-.. +..+|..-..+|+.+..
T Consensus 85 ~~~l~~~~~~aD~iv~~~P~y-----------~~~~p~~lK~~iD~~~~ 122 (223)
T 3u7i_A 85 MSEILQQFKSANTYVIVLPLH-----------NFNIPSKLKDYMDNIMI 122 (223)
T ss_dssp HHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHCC
T ss_pred HHHHHHHHHhCCEEEEEcChh-----------hccCCHHHHHHHHHHhh
Confidence 455667788999999976321 35678877788887753
No 73
>3o0l_A Uncharacterized protein; PFAM DUF1425 family member, structural genomics, joint cente structural genomics, JCSG, protein structure initiative; HET: MSE; 1.81A {Shewanella loihica}
Probab=23.56 E-value=3.3e+02 Score=22.81 Aligned_cols=57 Identities=9% Similarity=-0.089 Sum_probs=37.0
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCCC-CCCccccccccccccCCCCeEEEEEEecc
Q 007089 518 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIHV 576 (618)
Q Consensus 518 ~~~v~v~VtNtG~~~G~evvQlY~~~~~~~-~~P~k~L~gF~kv~l~pGes~~V~~~l~~ 576 (618)
-.+++++|+|+.+.+=.=--.+|==+..+- ..|. ...++++.|.++|+.+|+..-+.
T Consensus 39 ~l~~~~~l~N~~~~~~~l~Yrf~WyD~~Gl~v~~~--~~~W~~l~l~~~~~~~l~~vapn 96 (112)
T 3o0l_A 39 FLRARGTIISKSPKDQRLQYKFTWYDINGATVEDE--GVSWKSLKLHGKQQMQVTALSPN 96 (112)
T ss_dssp CEEEEEEEEECSSSCEEEEEEEEEECTTSCBCCCT--TCCCEEEEECTTCEEEEEEECSS
T ss_pred eEEEEEEEEeCCCCCEEEEEEEEEECCCCCCcCCC--CCCcEEEEECCCCeEEEEEECCC
Confidence 589999999998876222222222234443 2222 24678889999999988876654
No 74
>4b9f_A Cellulosomal-scaffolding protein A; sugar binding protein, cellulosome; 1.19A {Clostridium thermocellum atcc 27405} PDB: 1nbc_A
Probab=23.54 E-value=38 Score=30.43 Aligned_cols=34 Identities=15% Similarity=0.060 Sum_probs=28.4
Q ss_pred ccccccccCCCCeEEEEEEeccCCceeEEeCCCCE
Q 007089 555 IGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIR 589 (618)
Q Consensus 555 ~gF~kv~l~pGes~~V~~~l~~~~~ls~~d~~~~~ 589 (618)
.+|.-..|.||++.+|.|.+.. .+.+.||....|
T Consensus 94 I~Ft~g~l~pg~~~eiQ~ri~~-~~~s~~d~snDy 127 (152)
T 4b9f_A 94 ISFTGGTLEPGAHVQIQGRFAK-NDWSNYTQSNDY 127 (152)
T ss_dssp EEESSCEECTTCEEEEEEEEEE-TTCCCEESTTCT
T ss_pred EEccCceEcCCCcEEEEEEEEC-CCCcceeEcCCc
Confidence 4577677999999999999998 899999986554
No 75
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=23.05 E-value=1.3e+02 Score=27.54 Aligned_cols=40 Identities=23% Similarity=0.305 Sum_probs=28.7
Q ss_pred cchHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHH
Q 007089 315 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK 365 (618)
Q Consensus 315 ~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~ 365 (618)
+.+.+..+....||.+|++.-.. +..+|+.=..+|+.+..
T Consensus 61 ~~~~~l~~~i~~AD~iv~~sP~y-----------~~~~~~~lK~~iD~~~~ 100 (193)
T 3svl_A 61 ATVEALAEQIRQADGVVIVTPEY-----------NYSVPGGLKNAIDWLSR 100 (193)
T ss_dssp HHHHHHHHHHHHSSEEEEEECCB-----------TTBCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCEEEEEeccc-----------CCCCCHHHHHHHHHHhh
Confidence 44567778889999999875321 34678877788888763
No 76
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=22.82 E-value=1.2e+02 Score=27.83 Aligned_cols=40 Identities=18% Similarity=0.317 Sum_probs=28.6
Q ss_pred cchHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHH
Q 007089 315 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK 365 (618)
Q Consensus 315 ~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~ 365 (618)
+.+.+..+....||.+|++.-. + +..+|+.-..+|+.+..
T Consensus 56 ~~~~~~~~~i~~AD~iV~~sP~---y--------~~~~p~~lK~~iD~~~~ 95 (192)
T 3fvw_A 56 PEVAHAREEVQEADAIWIFSPV---Y--------NYAIPGPVKNLLDWLSR 95 (192)
T ss_dssp HHHHHHHHHHHHCSEEEEECCC---B--------TTBCCHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhCCEEEEECcc---c--------ccCCCHHHHHHHHHhhc
Confidence 4456677888999999986522 1 35678888888888763
No 77
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=22.35 E-value=44 Score=34.03 Aligned_cols=55 Identities=16% Similarity=0.074 Sum_probs=32.8
Q ss_pred hhcCCEEEEEecCCcccccccCCCCCCCCCh--hHHHHHHHHHHhcCCCEEEEEEcCceeec
Q 007089 324 ARQADATVLVMGLDQSIEAEFIDRAGLLLPG--RQQELVSRVAKASRGPVVLVLMCGGPVDV 383 (618)
Q Consensus 324 a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~--~q~~Li~~v~~~~~k~vVvVl~~g~P~~l 383 (618)
.++||++|++.|... .+|.+|.++-.-. --.++++++.+.++ ..++++. .+|+++
T Consensus 87 ~~daDiVIitaG~p~---kpG~tR~dll~~N~~I~k~i~~~I~k~~P-~a~ilvv-tNPvdi 143 (330)
T 3ldh_A 87 SAGSKLVVITAGARQ---QEGESRLNLVQRNVNIFKFIIPNIVKHSP-DCLKELH-PELGTD 143 (330)
T ss_dssp CSSCSEEEECCSCCC---CSSCCTTGGGHHHHHHHHHHHHHHHHHCT-TCEEEEC-SSSHHH
T ss_pred hCCCCEEEEeCCCCC---CCCCCHHHHHHhhHHHHHHHHHHHHhhCC-CceEEeC-CCccHH
Confidence 679999999988653 4455665432111 12345566666543 4454444 599887
No 78
>3gfu_C Chaperone protein FAEE; immunoglobulin like fold, chaperone, fimbrium, immunoglobulin domain, periplasm, plasmid, cell adhesion; 1.99A {Escherichia coli} PDB: 3gew_B 3f65_A 3f6i_A 3f6l_A
Probab=22.35 E-value=2.3e+02 Score=27.01 Aligned_cols=53 Identities=13% Similarity=0.130 Sum_probs=32.5
Q ss_pred EEEEEEEeCCCCCcceEEEEeeeCCCCC--CCCccccccccccccCCCCeEEEEEEec
Q 007089 520 GLHVDIKNTGDMAGTHTLLVFAKPPAGN--WSPNKQLIGFKKVHVTAGALQSVRLDIH 575 (618)
Q Consensus 520 ~v~v~VtNtG~~~G~evvQlY~~~~~~~--~~P~k~L~gF~kv~l~pGes~~V~~~l~ 575 (618)
.++++|+|+|+.. --.||..+.+.... ..|.--.==. ..|+||+.+.|+|...
T Consensus 17 ~~sl~l~N~~~~~-p~LvQsWid~~~~~~~~~pfivtPPl--fRlep~~~q~lRIi~~ 71 (224)
T 3gfu_C 17 ALTITVTNNDKER-TFGGQAWVDNIVEKDTRPTFVVTPSF--FKVKPNGQQTLRIIMA 71 (224)
T ss_dssp CEEEEEEECCSSC-CEEEEEEEEESSCCSCSCSEEEESSE--EEECTTCEEEEEEEEC
T ss_pred eEEEEEEeCCCCc-cEEEEEEEecCCCCcccCCEEEcCCe--EEECCCCceEEEEEEC
Confidence 5789999999653 35799999763221 1111000001 2489999999999543
No 79
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=21.98 E-value=56 Score=28.29 Aligned_cols=26 Identities=19% Similarity=0.103 Sum_probs=21.0
Q ss_pred cccCCCCeEEEEEEeccCCceeEEeCCCCEEecCceEEEEEe
Q 007089 560 VHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIG 601 (618)
Q Consensus 560 v~l~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~G~y~i~vG 601 (618)
+.|.||++.+++|+++. +|.|.++.+
T Consensus 98 ~~l~pG~~~~~~~~~~~----------------~G~y~f~C~ 123 (140)
T 1qhq_A 98 AMLNAGESGSVTFRTPA----------------PGTYLYICT 123 (140)
T ss_dssp CCBCTTEEEEEEEECCS----------------SEEEEEECC
T ss_pred eeeCCCceeEEEEEeCC----------------CeeEEEEeC
Confidence 45899999999999865 577777766
No 80
>3zqx_A Cellulose 1,4-beta-cellobiosidase; hydrolase, cellulose binding protein; 1.04A {Clostridium thermocellum} PDB: 2ylk_A
Probab=21.78 E-value=21 Score=31.88 Aligned_cols=34 Identities=24% Similarity=0.299 Sum_probs=27.3
Q ss_pred ccccccccCCC-CeEEEEEEeccCCceeEEeCCCCE
Q 007089 555 IGFKKVHVTAG-ALQSVRLDIHVCKHLSVVDKFGIR 589 (618)
Q Consensus 555 ~gF~kv~l~pG-es~~V~~~l~~~~~ls~~d~~~~~ 589 (618)
.+|....|.|| ++.+|.|.+.. .+++-||....|
T Consensus 81 I~f~~g~l~pg~~s~eiQ~Ri~~-~dws~~dqsnDy 115 (146)
T 3zqx_A 81 LEFKDVKLPAGGQTGEIQFVIRY-ADWSFHDQSNDY 115 (146)
T ss_dssp EEECSCEECTTCBCCCEEEEEEE-TTCCCEEGGGCT
T ss_pred EEeCCcEEcCCCceEEEEEEEEc-CCCccccccCCc
Confidence 46777789988 47899999998 889889876544
No 81
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=21.45 E-value=1.1e+02 Score=34.29 Aligned_cols=57 Identities=18% Similarity=0.091 Sum_probs=39.7
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCC--CCCCccccccc-cccccCCCCeEEEEEEecc
Q 007089 518 SLGLHVDIKNTGDMAGTHTLLVFAKPPAG--NWSPNKQLIGF-KKVHVTAGALQSVRLDIHV 576 (618)
Q Consensus 518 ~~~v~v~VtNtG~~~G~evvQlY~~~~~~--~~~P~k~L~gF-~kv~l~pGes~~V~~~l~~ 576 (618)
.+.|+++|+|..+.. ..|+++++.-.- .+.+..+++-= ..+.|+|+|++++.++|..
T Consensus 487 df~v~v~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~L~p~~~~~v~~~i~y 546 (695)
T 1g0d_A 487 DFDVIVEVKNEGGRD--AHAQLTMLAMAVTYNSLRRGECQRKTISVTVPAHKAHKEVMRLHY 546 (695)
T ss_dssp CEEEEEEEEECSSSC--EEEEEEEEEEEECTTCBCCCCCCEEEEEEEECTTEEEEEEEEECH
T ss_pred CEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCcccCceeEeeEEEEECCCceEEEEEEECH
Confidence 589999999998866 567887765322 13333333210 2456899999999999986
No 82
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=21.10 E-value=24 Score=35.29 Aligned_cols=57 Identities=16% Similarity=0.318 Sum_probs=31.9
Q ss_pred HHhhcCCEEEEEecCCcccccccCCCCCCCC-C-hhHHHHHHHHHHhcCCCEEEEEEcCceeec
Q 007089 322 VAARQADATVLVMGLDQSIEAEFIDRAGLLL-P-GRQQELVSRVAKASRGPVVLVLMCGGPVDV 383 (618)
Q Consensus 322 ~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~L-p-~~q~~Li~~v~~~~~k~vVvVl~~g~P~~l 383 (618)
++.++||++|++.|... .+|.+|.++-. + .--.++++++.+.+ ...++++. ++|+++
T Consensus 65 ~a~~~aDiVViaag~~~---kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivv-sNPvd~ 123 (294)
T 1oju_A 65 SLLKGSEIIVVTAGLAR---KPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVV-TNPMDV 123 (294)
T ss_dssp GGGTTCSEEEECCCCCC---CSSCCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEEC-SSSHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEe-CCcchH
Confidence 35679999999988653 33444443310 0 01124455565544 34555555 499987
No 83
>3dnf_A ISPH, LYTB, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; trilobal strucure, open alpha/beta, iron, iron-sulfur, isopr biosynthesis; 1.65A {Aquifex aeolicus}
Probab=20.77 E-value=3.8e+02 Score=26.64 Aligned_cols=149 Identities=9% Similarity=0.094 Sum_probs=75.6
Q ss_pred CHHHHHHHHHHH--hhcceeccCCCCCCCCCCCCCcEEEEEccCCCccccccccccccCCCcCCHHHHHHhhhhe--eee
Q 007089 228 TPAHQQLALQAA--HQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTTPLQGISRYAKT--IHQ 303 (618)
Q Consensus 228 ~~~~~~la~~~A--~esivLLKN~~~~LPL~~~~~~kIaviGp~a~~~~~~~G~~~g~~~~~~t~~~~l~~~~~~--~y~ 303 (618)
.||-..+.-++. ...+.|++|..++--|.. .++++++..-..+. ..+..+.+.|+++... .+.
T Consensus 124 HpEV~G~~g~~~~~~~~~~vV~~~ed~~~l~~--~~kv~~vsQTT~s~-----------~~~~~iv~~L~~r~p~~~~~~ 190 (297)
T 3dnf_A 124 HPEVIGTLGYLRACNGKGIVVETLEDIGEALK--HERVGIVAQTTQNE-----------EFFKEVVGEIALWVKEVKVIN 190 (297)
T ss_dssp CHHHHHHHHHHHHTTCCEEEESSGGGGGGGGG--CSEEEEEECTTCCH-----------HHHHHHHHHHHHHSSEEEEEC
T ss_pred CceEEeeccccccCCCcEEEEcCHHHHHhcCC--CCcEEEEEecCCcH-----------HHHHHHHHHHHHhCCCCCCCC
Confidence 466666665553 456788888665543432 25888885221110 0112344566655431 122
Q ss_pred ccccccccCCccchHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHHhcCCCEEEEEEcCceeec
Q 007089 304 AGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDV 383 (618)
Q Consensus 304 ~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~~~~k~vVvVl~~g~P~~l 383 (618)
.-|. .+....+++.++|+.+|++||+-|.++ .+-.+|. ++++..++|+..| -+-.=++.
T Consensus 191 tIC~----AT~~RQ~av~~la~~~D~miVVGg~nS---------------SNT~rL~-eia~~~~~~ty~I-e~~~el~~ 249 (297)
T 3dnf_A 191 TICN----ATSLRQESVKKLAPEVDVMIIIGGKNS---------------GNTRRLY-YISKELNPNTYHI-ETAEELQP 249 (297)
T ss_dssp CCCS----HHHHHHHHHHHHGGGSSEEEEESCTTC---------------HHHHHHH-HHHHHHCSSEEEE-SSGGGCCG
T ss_pred CccH----HHHHHHHHHHHHHhhCCEEEEECCCCC---------------chhHHHH-HHHHhcCCCEEEe-CChHHCCH
Confidence 2221 123344567788999999998654332 2344554 4555556777654 22233555
Q ss_pred ccccCCCCccEE-EEccCCCcc-hhHHHHHHH
Q 007089 384 SFAKNDPRIGAI-LWVGYPGQA-GGAAIADVL 413 (618)
Q Consensus 384 ~~~~~~~~v~Ai-L~a~~~G~e-~g~AlAdVL 413 (618)
.|+. .+..| |.|.-..++ --+.+.+.|
T Consensus 250 ~wl~---~~~~VGITAGASTP~~li~eVi~~l 278 (297)
T 3dnf_A 250 EWFR---GVKRVGISAGASTPDWIIEQVKSRI 278 (297)
T ss_dssp GGGT---TCSEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHhC---CCCEEEEeecCCCCHHHHHHHHHHH
Confidence 6663 55555 344433332 223444444
No 84
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=20.73 E-value=80 Score=28.72 Aligned_cols=52 Identities=13% Similarity=0.150 Sum_probs=31.6
Q ss_pred cchHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHH-----hcCCCEEEEEEc
Q 007089 315 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK-----ASRGPVVLVLMC 377 (618)
Q Consensus 315 ~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~-----~~~k~vVvVl~~ 377 (618)
..+.+..+....||.+|++.-. + ...+|+.-..+|+.+.. -.+||++++..+
T Consensus 61 ~~~~~~~~~l~~aD~ii~~sP~---y--------~~~~p~~lK~~iD~~~~~~~~~l~gK~~~~~~t~ 117 (193)
T 1rtt_A 61 PAVERFREQIRAADALLFATPE---Y--------NYSMAGVLKNAIDWASRPPEQPFSGKPAAILGAS 117 (193)
T ss_dssp HHHHHHHHHHHHCSEEEEECCE---E--------TTEECHHHHHHHHHHTCSSSCTTTTCEEEEEEEC
T ss_pred HHHHHHHHHHHhCCEEEEEccc---c--------ccCcCHHHHHHHHHhccccCcccCCCeEEEEEeC
Confidence 3456667778899999986421 1 23467776778887742 124555544444
No 85
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=20.61 E-value=1.1e+02 Score=34.36 Aligned_cols=57 Identities=12% Similarity=0.008 Sum_probs=40.7
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCC--CCCCcccccc-ccccccCCCCeEEEEEEecc
Q 007089 518 SLGLHVDIKNTGDMAGTHTLLVFAKPPAG--NWSPNKQLIG-FKKVHVTAGALQSVRLDIHV 576 (618)
Q Consensus 518 ~~~v~v~VtNtG~~~G~evvQlY~~~~~~--~~~P~k~L~g-F~kv~l~pGes~~V~~~l~~ 576 (618)
.+.++++++|..+.. ..|+++++.-.- .+.+..+++- =..+.|.|+|++++.++|..
T Consensus 497 df~v~l~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~~~~~i~~~i~y 556 (692)
T 1vjj_A 497 EVNLVLLLKNLSRDT--KTVTVNMTAWTIIYNGTLVHEVWKDSATMSLDPEEEAEHPIKISY 556 (692)
T ss_dssp CEEEEEEEEECSSSC--EEEEEEEEEEEECTTCCEEEEEEEEEEEEEECTTCEEEEEEEECH
T ss_pred CEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCccccceEEeeEEEEECCCceEEEEEEECH
Confidence 589999999998865 568888765322 2444444421 12456899999999999886
No 86
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=20.30 E-value=3.1e+02 Score=30.16 Aligned_cols=78 Identities=18% Similarity=0.182 Sum_probs=47.3
Q ss_pred eEEEEEEEEeCCCCCcceEEEEeeeCCCCC---CCCccccccccccccCCCCeEEEEEEeccCCceeEEeCCCCEEecCc
Q 007089 518 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN---WSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMG 594 (618)
Q Consensus 518 ~~~v~v~VtNtG~~~G~evvQlY~~~~~~~---~~P~k~L~gF~kv~l~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~G 594 (618)
+.+++-+|||.|..++.-.+. +..|.+. ..|.+ |. |. +.||++++++++.. . ..+.|. .|
T Consensus 538 ~~t~~rtvtnvg~~~~ty~~~--v~~p~gv~v~V~P~~-l~-f~----~~~~~~~~~vt~~~-~------~~~~~~--~g 600 (621)
T 3vta_A 538 NQYFNRTLTSVAPQASTYRAM--ISAPQGLTISVNPNV-LS-FN----GLGDRKSFTLTVRG-S------IKGFVV--SA 600 (621)
T ss_dssp EEEEEEEEEECSSSCEEEEEE--EECCSSEEEEEESSE-EE-EC----STTCEEEEEEEEEE-C------CCSSEE--EE
T ss_pred EEEEEEEEEccCCCCeEEEEE--EECCCCcEEEEecCE-EE-Ec----CCCcEEEEEEEEEe-c------CCCceE--EE
Confidence 578888999999876654444 4556542 34542 32 22 67999988888864 2 234443 24
Q ss_pred eEEEEEeCCCCeEEEEEEEc
Q 007089 595 EHSLHIGDLKHSISLQANLE 614 (618)
Q Consensus 595 ~y~i~vG~ss~~~~~~~~~~ 614 (618)
.... .+..|.+|.-+.|+
T Consensus 601 ~l~w--~d~~h~Vr~Pi~v~ 618 (621)
T 3vta_A 601 SLVW--SDGVHYVRSPITIT 618 (621)
T ss_dssp EEEE--ECSSCCCEEEEEEE
T ss_pred EEEE--EcCCEEEEeCEEEE
Confidence 4332 45567777776665
No 87
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=20.05 E-value=99 Score=28.54 Aligned_cols=53 Identities=9% Similarity=0.075 Sum_probs=34.0
Q ss_pred ccchHHHHHHhhcCCEEEEEecCCcccccccCCCCCCCCChhHHHHHHHHHH--hcCCCEEEEEEc
Q 007089 314 NQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK--ASRGPVVLVLMC 377 (618)
Q Consensus 314 ~~~~~~a~~~a~~aD~vIv~vg~~~~~~~Eg~Dr~~l~Lp~~q~~Li~~v~~--~~~k~vVvVl~~ 377 (618)
++.+.+..+....||.+|++.-.. +..+|+.=..+|..+.. -.+||++++..+
T Consensus 73 ~~~~~~~~~~i~~AD~ivi~sP~Y-----------~~~~~~~lK~~iD~~~~~~l~gK~~~~v~t~ 127 (191)
T 3k1y_A 73 TTKLEEITSALSASDGLVVATPVF-----------KASYTGLFKMFFDILDTDALTGMPTIIAATA 127 (191)
T ss_dssp CHHHHHHHHHHHHCSEEEEEEECB-----------TTBSCHHHHHHHHHSCTTTTTTCEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCEEEEEcCcc-----------CCcCcHHHHHHHHHhhhhhcCCCEEEEEEeC
Confidence 345677888899999999975321 34567766777776642 235666555443
Done!