BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007094
(618 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224114846|ref|XP_002316872.1| predicted protein [Populus trichocarpa]
gi|222859937|gb|EEE97484.1| predicted protein [Populus trichocarpa]
Length = 657
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/618 (68%), Positives = 490/618 (79%), Gaps = 18/618 (2%)
Query: 5 HELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLC 64
+LQMSWQPSLLS+KRK GPPLGL+NLGNSCYLNSVLQCLTYTPPLANFCL+LQHSSLC
Sbjct: 7 QKLQMSWQPSLLSQKRK-NGPPLGLKNLGNSCYLNSVLQCLTYTPPLANFCLRLQHSSLC 65
Query: 65 KQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQED 124
DS + +RKR+CPFCILEKRIVRSLS+DLTLDAPAKIQSCL+IFAEHF+CGRQED
Sbjct: 66 -----DSVANGDRKRDCPFCILEKRIVRSLSLDLTLDAPAKIQSCLKIFAEHFRCGRQED 120
Query: 125 AHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
AHEFLRYVIDACHNTCLRLKKLRRKG + GG SVVKEIFGGALQSQVKC
Sbjct: 121 AHEFLRYVIDACHNTCLRLKKLRRKGIEN--------GGGGGVSVVKEIFGGALQSQVKC 172
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
L C ESNKVDEIMDISLD+LNS S+++AMQKFFQPEVLDGNNKYKC+ C+KLV+ARKQM
Sbjct: 173 LCCNYESNKVDEIMDISLDVLNSYSVRDAMQKFFQPEVLDGNNKYKCEKCQKLVAARKQM 232
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHS 304
SILQ+PN+LVIQLKRFEGIFG KIDKAIAFEEVLVLSSFM K SQDPQPEY LFGTIVHS
Sbjct: 233 SILQAPNVLVIQLKRFEGIFGAKIDKAIAFEEVLVLSSFMSKTSQDPQPEYNLFGTIVHS 292
Query: 305 GFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTF 364
G+SP+SGHYYAYIKDA+GRWYCCNDSYV++STLQEVLSEKVY+LFF R NQRP SA +F
Sbjct: 293 GYSPESGHYYAYIKDAMGRWYCCNDSYVTLSTLQEVLSEKVYVLFFSRTNQRPASAASSF 352
Query: 365 ASNGVKSHE-NGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKVEKVPSNPRLKFS 423
AS GVKS E NG +K KG VPLKA+ TKP EQSS+K S +S++++VPS+P +K S
Sbjct: 353 ASYGVKSCESNGCVEFKSSKGAVPLKALPTKPQVEQSSKKDISAMSRIDRVPSSPPVKSS 412
Query: 424 ISGSSGCKGVPPTSNGKVNVHKSQSVKMNGVVKDSVPKEKSGKD--PFINTNGSYKSKRV 481
I G+SG K P + NGKV+ K Q+ MNG VK++V EK KD ++NG K K V
Sbjct: 413 ICGNSGSKSTPLSVNGKVDHLKGQNKGMNGNVKETVHVEKHDKDVSTVTSSNGFEKHKNV 472
Query: 482 DLVGRGNDLASVSTSENGDTQSVGLNPVKPDPHEGNCTSSRTTAGRVPDPAKLLNGSVKF 541
D V N A + SENG +Q+ N VKP + N T+S+ T GRV D +L NGS+K
Sbjct: 473 DAVEGENCHAFAAASENGHSQNAAFNSVKPLVCDSNGTTSKVTTGRVHDHLELQNGSMKC 532
Query: 542 DTDISGSKRKSQE-SCILLAQDSESLAKLQELEEVLKKEASSVLQSCGWSEKVLSYMRSR 600
DISG KRK +E + ILLAQD++SLAK++E +E LK++AS +L SCG+ +KV +MR+R
Sbjct: 533 CADISGLKRKLKEDTSILLAQDAQSLAKIEEFKEALKQQASLILGSCGFFDKVYDFMRAR 592
Query: 601 KRQCAHEVGITPGDIDLK 618
KR C HE G P +LK
Sbjct: 593 KRLCVHEAGNKPSGTELK 610
>gi|255577279|ref|XP_002529521.1| cysteine-type endopeptidase, putative [Ricinus communis]
gi|223531005|gb|EEF32859.1| cysteine-type endopeptidase, putative [Ricinus communis]
Length = 644
Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/623 (66%), Positives = 484/623 (77%), Gaps = 20/623 (3%)
Query: 3 LAHELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSS 62
+ ELQMSWQPSLLS+KRK PPLGLRNLGNSCYLNSVLQCLTYTPPLANFCL+LQHSS
Sbjct: 1 MGFELQMSWQPSLLSQKRK-NRPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLRLQHSS 59
Query: 63 LCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQ 122
LC DS + ERKRECPFCILEKRIVRSLS+DLTLDAPAKIQSCL+IFAEHFK G+Q
Sbjct: 60 LC-----DSVSNGERKRECPFCILEKRIVRSLSLDLTLDAPAKIQSCLKIFAEHFKGGQQ 114
Query: 123 EDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSS---VVKEIFGGALQ 179
EDAHEFLRYVIDACHNTCLRL KLRRKG S+ +T S+ VVKEIFGG LQ
Sbjct: 115 EDAHEFLRYVIDACHNTCLRLMKLRRKGINSNNKNYDNDTTTSTSTSTSVVKEIFGGTLQ 174
Query: 180 SQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVS 239
SQVKCL+C +ESNKVDEIMDISLD+L+S SL+EAMQKFFQPE+LDGNNKY+C++CKKLV+
Sbjct: 175 SQVKCLSCHSESNKVDEIMDISLDVLHSNSLREAMQKFFQPEILDGNNKYRCESCKKLVA 234
Query: 240 ARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFG 299
ARKQMSILQ+PNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCK SQDP+PEY LFG
Sbjct: 235 ARKQMSILQAPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKGSQDPRPEYNLFG 294
Query: 300 TIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVS 359
TIVHSG+SP+SGHYYAYIKDA GRWYCCNDSYV++ST+Q+VLSEKVYILFF R+NQRP S
Sbjct: 295 TIVHSGYSPESGHYYAYIKDATGRWYCCNDSYVTLSTMQDVLSEKVYILFFSRSNQRPGS 354
Query: 360 ANGTFASNGVKS-HENGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKVEKVPSNP 418
A +F +K + NG EA K TV AV + S EQ SRK ++SKV+KVPS+P
Sbjct: 355 AGPSFTP--IKPCNPNGCEASNISKVTVSPNAVDAEASVEQPSRKDIPSMSKVDKVPSSP 412
Query: 419 RLKFSISGSSGCKGVPPTSNGKVNVHKSQSVKMNGVVKDSVPKEKSGKD--PFINTNGSY 476
R+KF+I G+S K + PT +GK HKSQ+++MNG +KD V EK KD IN NG
Sbjct: 413 RVKFNIFGNSLSKRILPTGDGKAESHKSQNMEMNGSMKDRVYVEKHDKDMPSTINGNGCN 472
Query: 477 KSKRVDLVGRGNDLASVSTSENGDTQSVGLNPVKPDPHEGNCTSSRTTAGRVPDPAKLLN 536
KS++++ G A S NG TQ+ + KP +E N ++S T G P KL N
Sbjct: 473 KSRKINDGETGQ--AITKASANGVTQNGASDSGKPCLYESNGSAS-TDKG--PGQHKLQN 527
Query: 537 GSVKFDTDISGSKRKSQE-SCILLAQDSESLAKLQELEEVLKKEASSVLQSCGWSEKVLS 595
G V + I KRK +E SCIL+AQD++S +++EL+E LK+EAS+VL+SCGWS KV S
Sbjct: 528 GGVNCHSGIPELKRKLKEDSCILIAQDAQSRTEVKELKEALKQEASTVLRSCGWSSKVYS 587
Query: 596 YMRSRKRQCAHEVGITPGDIDLK 618
+M SRKR CA E G P DIDLK
Sbjct: 588 FMCSRKRLCAREPGNLPSDIDLK 610
>gi|224121556|ref|XP_002330730.1| predicted protein [Populus trichocarpa]
gi|222872506|gb|EEF09637.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/614 (65%), Positives = 470/614 (76%), Gaps = 31/614 (5%)
Query: 9 MSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLT 68
MSWQP+LLS++RK G PLGL+NLGNSCYLNSVLQCLTYTPPLANFCL+LQHSSLC L
Sbjct: 1 MSWQPNLLSQQRKNG--PLGLKNLGNSCYLNSVLQCLTYTPPLANFCLRLQHSSLCNSLA 58
Query: 69 GDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEF 128
+RKR+CPFCILEK+IVRSLS DL D P+KI+SCL+IFAEHF+CGRQEDAHEF
Sbjct: 59 S-----GDRKRDCPFCILEKQIVRSLSSDLAHDVPSKIRSCLKIFAEHFRCGRQEDAHEF 113
Query: 129 LRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
LRYVIDACHNTCLRLKKL KG + G G SVVK+IFGGALQSQVKCL C
Sbjct: 114 LRYVIDACHNTCLRLKKLSWKGIENGGDG----------SVVKKIFGGALQSQVKCLCCN 163
Query: 189 AESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQ 248
ESNKVDEIMDISLD+LNS S+++AMQKFFQPEVLDGNNKYKC+NCKKLV+ARKQMS+LQ
Sbjct: 164 CESNKVDEIMDISLDVLNSNSVRDAMQKFFQPEVLDGNNKYKCENCKKLVAARKQMSVLQ 223
Query: 249 SPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSP 308
+PN+LVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFM K SQDPQP+Y LFG IVHSG+S
Sbjct: 224 APNVLVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMSKTSQDPQPKYNLFGIIVHSGYSL 283
Query: 309 DSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNG 368
++GHYYAYIKDAIG+WYCCNDSYV++STLQEV+SEK YILFF R NQRPVSA+ F SNG
Sbjct: 284 EAGHYYAYIKDAIGQWYCCNDSYVTLSTLQEVMSEKAYILFFSRTNQRPVSADSAFTSNG 343
Query: 369 VKSHE-NGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKVEKVPSNPRLKFSISGS 427
VKS E NG EA K K VPLKA+ TKP E+SSRK S +SK+++VPS+P +KFS G+
Sbjct: 344 VKSCELNGSEASKSSKAAVPLKALPTKPQVEKSSRKDISAMSKIDRVPSSPPVKFSFVGN 403
Query: 428 SGCKGVPPTSNGKVNVHKSQSVKMNGVVKDSVPKEKSGKD--PFINTNGSYKSKRVDLVG 485
SG K V + NGKV+ HK Q+ +MNG VK++V E KD ++NG K K VD V
Sbjct: 404 SGSKSVSSSVNGKVDPHKCQNKEMNGNVKETVHVEICDKDVSTVTSSNGFEKHKNVDAVE 463
Query: 486 RGNDLASVSTSENGDTQSVGLNPVKPDPHEGNCTSSRTTAGRVPDPAKLLNGSVKFDTDI 545
+ SENG +Q+ N VKP R D +L NG +K+ DI
Sbjct: 464 GETHHTFAAASENGHSQNGAFNSVKP----------HICDRRGHDQLELQNGGMKYHADI 513
Query: 546 SGSKRK-SQESCILLAQDSESLAKLQELEEVLKKEASSVLQSCGWSEKVLSYMRSRKRQC 604
SG KRK +ESCILL+QD++SLAK++E +EVL +EASS+L SCG S+KV ++MR+RKR C
Sbjct: 514 SGLKRKLKEESCILLSQDAQSLAKVEEFKEVLNQEASSILGSCGLSDKVYNFMRARKRSC 573
Query: 605 AHEVGITPGDIDLK 618
E G P DLK
Sbjct: 574 IQEAGNKPSGTDLK 587
>gi|356525831|ref|XP_003531525.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Glycine
max]
Length = 641
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/612 (63%), Positives = 463/612 (75%), Gaps = 20/612 (3%)
Query: 7 LQMSWQPSLLSEKRKRG-GPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
LQM+WQPSLLS+KRK G GPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCL+LQHS
Sbjct: 3 LQMTWQPSLLSQKRKTGTGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLRLQHS---- 58
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
+L CPFCILEK+I RSL +DLT DAP+KIQSC+RIFAE+F+CGRQEDA
Sbjct: 59 ------SLCDSSGSSCPFCILEKQIARSLRLDLTHDAPSKIQSCIRIFAENFRCGRQEDA 112
Query: 126 HEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
HEFLRYVIDACHNTCLRLKKLRRKG ++GGG GGS+VVKEIFGGALQSQVKCL
Sbjct: 113 HEFLRYVIDACHNTCLRLKKLRRKGAEANGGGDEA----GGSTVVKEIFGGALQSQVKCL 168
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
CG ESNKVDEIMDISLD+ +S SLK++MQKFFQPEVLDGNNKYKCD+CKKLV+A+KQMS
Sbjct: 169 CCGYESNKVDEIMDISLDVFHSNSLKDSMQKFFQPEVLDGNNKYKCDSCKKLVAAKKQMS 228
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
ILQ+PNILVIQLKRFEGI GGKIDKA+AFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG
Sbjct: 229 ILQAPNILVIQLKRFEGILGGKIDKAVAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 288
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFA 365
+SP+SGHYYAYIKDA+GRWYCC+DS V+V+TLQEVLSEKVYILFF R NQRPVS++ + A
Sbjct: 289 YSPESGHYYAYIKDAMGRWYCCDDSCVTVATLQEVLSEKVYILFFSRTNQRPVSSSNSLA 348
Query: 366 SNGVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKVEKVPSNPRLKFSIS 425
SNGVK H NG + + K VP KAV K ++E SS K +SK K PS+ R+KF I+
Sbjct: 349 SNGVKPHSNGSQTSECPKVGVPPKAVHAKSNSELSSWKDIPRVSKTAKAPSSSRVKFDIN 408
Query: 426 GSSGCK--GVPPTSNGKVNVHKSQSVKMNGVVKDSVPKEKSGKDPFINTNGSYKSKRVDL 483
GSS K P + NGKV+V ++Q +NG VKDS E +D + T +V +
Sbjct: 409 GSSSSKRNSAPVSVNGKVDVCRNQPSAVNGHVKDSASLENGKEDSSLPTRNGIDENKVSV 468
Query: 484 VGRGNDLASVSTSENGDTQSVGLNPVKPDPHEGNCTSSRTTAGRVPDPAKLLNGSVKFDT 543
++VS G+ Q+V ++ VK D E + SR AGRVPD K + +
Sbjct: 469 DKLKRKESTVSNGHTGN-QTVDIHSVKSDLKE-DTDRSRIIAGRVPDNFKQESNGLNNKP 526
Query: 544 DISGSKRKSQ-ESCILLAQDSESLAKLQELEEVLKKEASSVLQSCGWSEKVLSYMRSRKR 602
I G+KRK Q + CILLA D +S A++QEL+++L KEA SVL+S GW++KV +MRS+K
Sbjct: 527 TILGNKRKLQGDPCILLAHDGQSQARVQELKDILGKEAKSVLRSIGWTDKVYEFMRSKKL 586
Query: 603 QCAHEVGITPGD 614
+ +T GD
Sbjct: 587 RAQEAGNLTNGD 598
>gi|296086774|emb|CBI32923.3| unnamed protein product [Vitis vinifera]
Length = 635
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/609 (64%), Positives = 460/609 (75%), Gaps = 24/609 (3%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQ 66
LQM+WQPSLL +KRK GPPLGL+NLGNSCYLNSVLQCLTYTPPLANFCL HSSLC
Sbjct: 3 LQMTWQPSLLHQKRK-NGPPLGLKNLGNSCYLNSVLQCLTYTPPLANFCLNHLHSSLC-- 59
Query: 67 LTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAH 126
DSA+D RKRECPFCILEKRIVRSLS+DLT DAP+KIQSCLRIFAEHF+ GRQEDAH
Sbjct: 60 ---DSAVD--RKRECPFCILEKRIVRSLSMDLTQDAPSKIQSCLRIFAEHFRLGRQEDAH 114
Query: 127 EFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLA 186
EFLRYVIDACHNTCLRLKKLRRKG +G +SVVK+IFGGALQSQVKCL+
Sbjct: 115 EFLRYVIDACHNTCLRLKKLRRKGNNDNGPST--------TSVVKDIFGGALQSQVKCLS 166
Query: 187 CGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSI 246
CGAESNK DEIMDISLD+L+ SLK+A+Q FFQPEVLDGNNKYKCDNCKKLVSARKQMSI
Sbjct: 167 CGAESNKTDEIMDISLDVLHFNSLKQALQNFFQPEVLDGNNKYKCDNCKKLVSARKQMSI 226
Query: 247 LQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF 306
LQ+PN+LVIQLKRFEG++GGKIDK IAFEEVLVLSS+M KASQD PEY LF TIVHSG+
Sbjct: 227 LQAPNVLVIQLKRFEGLYGGKIDKLIAFEEVLVLSSYMNKASQDSHPEYNLFATIVHSGY 286
Query: 307 SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFAS 366
SP+SGHYYAYIKDA+GRWYCCNDSYVS+STLQ VLSEKVYILFF R N R + FAS
Sbjct: 287 SPESGHYYAYIKDAMGRWYCCNDSYVSLSTLQGVLSEKVYILFFSRTNARISPPSKAFAS 346
Query: 367 NGVKSHE-NGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKVEKVPSNPRLKFSIS 425
+ VK+ + NG K + +P+K TK + E SS STISKV+KVPS+ ++K +
Sbjct: 347 HNVKNRDCNGNNTSKNPRTALPVKTRHTKQNVEHSSGMDTSTISKVDKVPSSLQIKSNSF 406
Query: 426 GSSGCKGVPPTSNGKVNVHKSQSVKMNGVVKDSVPKEKSGKDPFINTNGSYKSKRVDLVG 485
+ K V T NGK++VHK+Q ++ NG D V K + G N+NG +KRVD
Sbjct: 407 EKTVSKRVLATGNGKLDVHKNQILEKNG---DVVEKSEKGTPSLANSNGFSINKRVDAAD 463
Query: 486 RGNDLASVSTSENGDTQSVGLNPVKPDPHEGNCTSSRTTAGRVPDPAKLLNGSVKFDTDI 545
N VS +EN Q++ N K D +EGN SR TA + ++ NG VK +
Sbjct: 464 SVNGF--VSANENDKLQNISGNSGKVDLYEGNVVKSRMTAEGRSNFHEVHNGGVKCPPGV 521
Query: 546 SGSKRKSQE--SCILLAQDSESLAKLQELEEVLKKEASSVLQSCGWSEKVLSYMRSRKRQ 603
SG KRKSQ+ SCILLAQD+ SLAK++E ++ LKKEAS VL+SCGW++++ +M SRKR
Sbjct: 522 SGVKRKSQDKGSCILLAQDAHSLAKVEEFKDGLKKEASLVLRSCGWTDRLYIFMHSRKRL 581
Query: 604 CAHEVGITP 612
CA + G P
Sbjct: 582 CAQKSGDPP 590
>gi|225462100|ref|XP_002271760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Vitis
vinifera]
Length = 631
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/607 (64%), Positives = 458/607 (75%), Gaps = 24/607 (3%)
Query: 9 MSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLT 68
M+WQPSLL +KRK GPPLGL+NLGNSCYLNSVLQCLTYTPPLANFCL HSSLC
Sbjct: 1 MTWQPSLLHQKRK-NGPPLGLKNLGNSCYLNSVLQCLTYTPPLANFCLNHLHSSLC---- 55
Query: 69 GDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEF 128
DSA+D RKRECPFCILEKRIVRSLS+DLT DAP+KIQSCLRIFAEHF+ GRQEDAHEF
Sbjct: 56 -DSAVD--RKRECPFCILEKRIVRSLSMDLTQDAPSKIQSCLRIFAEHFRLGRQEDAHEF 112
Query: 129 LRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
LRYVIDACHNTCLRLKKLRRKG +G +SVVK+IFGGALQSQVKCL+CG
Sbjct: 113 LRYVIDACHNTCLRLKKLRRKGNNDNGPST--------TSVVKDIFGGALQSQVKCLSCG 164
Query: 189 AESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQ 248
AESNK DEIMDISLD+L+ SLK+A+Q FFQPEVLDGNNKYKCDNCKKLVSARKQMSILQ
Sbjct: 165 AESNKTDEIMDISLDVLHFNSLKQALQNFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQ 224
Query: 249 SPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSP 308
+PN+LVIQLKRFEG++GGKIDK IAFEEVLVLSS+M KASQD PEY LF TIVHSG+SP
Sbjct: 225 APNVLVIQLKRFEGLYGGKIDKLIAFEEVLVLSSYMNKASQDSHPEYNLFATIVHSGYSP 284
Query: 309 DSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNG 368
+SGHYYAYIKDA+GRWYCCNDSYVS+STLQ VLSEKVYILFF R N R + FAS+
Sbjct: 285 ESGHYYAYIKDAMGRWYCCNDSYVSLSTLQGVLSEKVYILFFSRTNARISPPSKAFASHN 344
Query: 369 VKSHE-NGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKVEKVPSNPRLKFSISGS 427
VK+ + NG K + +P+K TK + E SS STISKV+KVPS+ ++K +
Sbjct: 345 VKNRDCNGNNTSKNPRTALPVKTRHTKQNVEHSSGMDTSTISKVDKVPSSLQIKSNSFEK 404
Query: 428 SGCKGVPPTSNGKVNVHKSQSVKMNGVVKDSVPKEKSGKDPFINTNGSYKSKRVDLVGRG 487
+ K V T NGK++VHK+Q ++ NG D V K + G N+NG +KRVD
Sbjct: 405 TVSKRVLATGNGKLDVHKNQILEKNG---DVVEKSEKGTPSLANSNGFSINKRVDAADSV 461
Query: 488 NDLASVSTSENGDTQSVGLNPVKPDPHEGNCTSSRTTAGRVPDPAKLLNGSVKFDTDISG 547
N VS +EN Q++ N K D +EGN SR TA + ++ NG VK +SG
Sbjct: 462 NGF--VSANENDKLQNISGNSGKVDLYEGNVVKSRMTAEGRSNFHEVHNGGVKCPPGVSG 519
Query: 548 SKRKSQE--SCILLAQDSESLAKLQELEEVLKKEASSVLQSCGWSEKVLSYMRSRKRQCA 605
KRKSQ+ SCILLAQD+ SLAK++E ++ LKKEAS VL+SCGW++++ +M SRKR CA
Sbjct: 520 VKRKSQDKGSCILLAQDAHSLAKVEEFKDGLKKEASLVLRSCGWTDRLYIFMHSRKRLCA 579
Query: 606 HEVGITP 612
+ G P
Sbjct: 580 QKSGDPP 586
>gi|356556930|ref|XP_003546773.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Glycine
max]
Length = 652
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/615 (65%), Positives = 468/615 (76%), Gaps = 26/615 (4%)
Query: 7 LQMSWQPSLLSEKRKRG-GPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
LQM+WQPSLLS+KRK G GPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCL+LQHS
Sbjct: 3 LQMTWQPSLLSQKRKTGTGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLRLQHS---- 58
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
+L CPFCILEK+I RSL +DLT DAP+KIQSC+RIFAE+F+CGRQEDA
Sbjct: 59 ------SLCDSSASSCPFCILEKQIARSLRLDLTYDAPSKIQSCIRIFAENFRCGRQEDA 112
Query: 126 HEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
HEFLRYVIDACHNTCLRLKKLRRKG ++GGGGG G +VVKEIFGGALQSQVKCL
Sbjct: 113 HEFLRYVIDACHNTCLRLKKLRRKGAEANGGGGGDTG---GGTVVKEIFGGALQSQVKCL 169
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
CG ESNKVDEIMDISLD+ +S SLK++MQKFFQPEVLDGNNKYKCD+CKKLV+A+KQMS
Sbjct: 170 CCGYESNKVDEIMDISLDVFHSNSLKDSMQKFFQPEVLDGNNKYKCDSCKKLVAAKKQMS 229
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
ILQ+PNILVIQLKRFEGI GGKIDKA+AFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG
Sbjct: 230 ILQAPNILVIQLKRFEGILGGKIDKAVAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 289
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFA 365
+SP+SGHYYAYIKDA+GRWYCC+DS V+V+TLQEVLSEKVYILFF R NQRPV++ + A
Sbjct: 290 YSPESGHYYAYIKDAMGRWYCCDDSCVTVATLQEVLSEKVYILFFSRTNQRPVASCNSLA 349
Query: 366 SNGVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKVEKVPSNPRLKFSIS 425
SNGVK H NG + + K VP KAV K ++E S K ++SK K PS+ R+KF I+
Sbjct: 350 SNGVKPHSNGSQTSECPKVGVPPKAVHVKSNSELSPCKDMPSVSKTAKAPSSSRVKFDIN 409
Query: 426 GSSGCKGVPPTS-NGKVNVHKSQSVKMNGVVKDSVPKEKSGKDPFINT-NGSYKSK-RVD 482
GSS + P S NGKV+V ++Q +NG VKDSV E KD + T NG K+K VD
Sbjct: 410 GSSSKRNPAPVSVNGKVDVSRNQPSVINGHVKDSVSLENGKKDSSLPTSNGIDKNKVAVD 469
Query: 483 LVGRGNDLASVSTSENGDT--QSVGLNPVKPDPHEGNCTSSRTTAGRVPDPAKLLNGSVK 540
+ R ST NG T Q+V ++ VK D E + SR AGRVPD K + +
Sbjct: 470 KLKRKE-----STVTNGHTGNQTVDIHSVKSDLKE-DTDRSRVIAGRVPDNFKHESNDLN 523
Query: 541 FDTDISGSKRKSQES-CILLAQDSESLAKLQELEEVLKKEASSVLQSCGWSEKVLSYMRS 599
I G+KRK QE CILLA D +S A++QEL+++L KEA SVL+SCGW++KV +MRS
Sbjct: 524 NKPTILGNKRKLQEDPCILLAHDGQSQARVQELKDILGKEAKSVLRSCGWTDKVYEFMRS 583
Query: 600 RKRQCAHEVGITPGD 614
+K +T GD
Sbjct: 584 KKLHAQEAGNLTNGD 598
>gi|449460062|ref|XP_004147765.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Cucumis
sativus]
gi|449519156|ref|XP_004166601.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Cucumis
sativus]
Length = 646
Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/627 (62%), Positives = 470/627 (74%), Gaps = 26/627 (4%)
Query: 3 LAHELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSS 62
+A +LQMSWQPSLLS+KR R GPPLGL+NLGN+CYLNSVLQCLTYTPPLANFCL+ QHSS
Sbjct: 1 MALQLQMSWQPSLLSQKR-RNGPPLGLKNLGNTCYLNSVLQCLTYTPPLANFCLRNQHSS 59
Query: 63 LCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQ 122
LC + D A+RKRECPFCILE+RIVRSLS+DLTLD+P +QSCLRIFAEHF+ GRQ
Sbjct: 60 LCDFASSD----ADRKRECPFCILERRIVRSLSLDLTLDSPLNVQSCLRIFAEHFRLGRQ 115
Query: 123 EDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQV 182
EDAHEFLRYVIDACHNTCLRLKKLRR G + GG T G S+VVKEIFGGALQSQV
Sbjct: 116 EDAHEFLRYVIDACHNTCLRLKKLRRNGSYN----GGATT--GSSTVVKEIFGGALQSQV 169
Query: 183 KCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
KCL+CG +SNKVDEIMDISLD+L+S SLKEA+QKFFQ E+LDG+NKYKCDNCKKLV ARK
Sbjct: 170 KCLSCGNDSNKVDEIMDISLDVLHSSSLKEALQKFFQLEILDGSNKYKCDNCKKLVVARK 229
Query: 243 QMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIV 302
QMSILQ+PNILVIQLKRFEGIFGGKIDKAIA+EE L LS+FMCK SQD +PEYKLFGTIV
Sbjct: 230 QMSILQAPNILVIQLKRFEGIFGGKIDKAIAYEESLQLSNFMCKGSQDSRPEYKLFGTIV 289
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANG 362
HSGFS +SGHYYAYIKDA GRWYCCNDSYV+VSTLQEVLSEKVYILFF R NQRPV+A+
Sbjct: 290 HSGFSAESGHYYAYIKDASGRWYCCNDSYVTVSTLQEVLSEKVYILFFSRTNQRPVTAST 349
Query: 363 TFASNGVKSHE-NGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKVEKVPSNPRLK 421
ASNGVKSHE N + K K +V K T+ EQSSRK S++SKV+K + R K
Sbjct: 350 ALASNGVKSHECNRSDGSKVSKHSVVTKTAQTRSHVEQSSRKELSSLSKVDKPTFSSRGK 409
Query: 422 FSISGSSGCKG------VPPTSNGKVNVHKSQSVKMNGVVK-DSVPKEKSGKDPFINTNG 474
+++G S G P T NGK+ + + QS+K N +S+P E + NG
Sbjct: 410 SNMNGHSNMNGHSNTIRAPSTINGKIVLEEDQSIKENEKENVNSLPLENGARHKSSLGNG 469
Query: 475 -SYKSKRV--DLVGRGNDLASVSTSENGDTQSVGLNPVKPDPHEGNCTSSRTTAGRVPDP 531
S KS V D++ R + SV S NG+ S+G+ K DP N +++ T+GR +
Sbjct: 470 NSKKSFEVEHDVIER--EHKSVLVSSNGNGGSMGMKADKHDPCNINPMNNKFTSGRGSNH 527
Query: 532 AKLLNGSVKFDTDISGSKRKSQESCILLAQDSESLAKLQELEEVLKKEASSVLQSCGWSE 591
++ N S +++ +KRKS + CIL QD++S ++++L++ LK+E SVL+SCGW E
Sbjct: 528 DEVDNAS-NCPSEVRRAKRKS-DFCILFQQDAQSRERVEDLKQDLKRETLSVLRSCGWLE 585
Query: 592 KVLSYMRSRKRQCAHEVGITPGDIDLK 618
+V + MRSRKR C E+ T DLK
Sbjct: 586 EVFNCMRSRKRLCLREMDTTQSCNDLK 612
>gi|297834320|ref|XP_002885042.1| ubiquitin-specific protease 25 [Arabidopsis lyrata subsp. lyrata]
gi|297330882|gb|EFH61301.1| ubiquitin-specific protease 25 [Arabidopsis lyrata subsp. lyrata]
Length = 662
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/647 (56%), Positives = 438/647 (67%), Gaps = 52/647 (8%)
Query: 3 LAHELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSS 62
+ +LQMSW PSLLS+KR R GPPLGLRNLGN+CYLNSVLQCLT+TPPLANFCL +HSS
Sbjct: 1 MGFKLQMSWMPSLLSQKR-RNGPPLGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSS 59
Query: 63 LCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQ 122
C DS +D ERKR+CPFCI+EKRI RSLSVDLT DAP KI SCL+IFAEHFK GRQ
Sbjct: 60 HC-----DSYVDGERKRDCPFCIVEKRIARSLSVDLTTDAPNKISSCLKIFAEHFKLGRQ 114
Query: 123 EDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQV 182
EDAHEFLRYVIDACHNT LRLKKLR KG E NG ++VVKEIFGGALQSQV
Sbjct: 115 EDAHEFLRYVIDACHNTSLRLKKLRIKGN---------EPFNG-NTVVKEIFGGALQSQV 164
Query: 183 KCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
KCL+CGAESNK DEIMDISL+IL+S S+KE+MQKFFQ E+LDGNNKYKC+ C+KLV+ARK
Sbjct: 165 KCLSCGAESNKADEIMDISLEILHSSSVKESMQKFFQSEILDGNNKYKCETCEKLVTARK 224
Query: 243 QMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIV 302
QMSILQ+PNILVIQLKRF GIFGGKIDKAI+F E+LVLS+FM KAS+DPQPEYKLFG IV
Sbjct: 225 QMSILQAPNILVIQLKRFGGIFGGKIDKAISFGEILVLSNFMSKASKDPQPEYKLFGIIV 284
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANG 362
HSGFSP+SGHYYAY+KD++GRWYCCNDS+VS+STLQEVLSEK YILFF R+NQRP SA
Sbjct: 285 HSGFSPESGHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEKAYILFFSRSNQRPASAKT 344
Query: 363 TFASNGVKSHE-NGKEAYKGVKGTVPLKAVATKPSAEQSSRKT------PSTI------- 408
SNG SHE NG E K PL V KP +EQS +K P
Sbjct: 345 LVTSNGTTSHEVNGCETSNPQKFIGPLNGVNMKPQSEQSFQKVKLASSKPHKFIGPKLRA 404
Query: 409 -----------SKVEKVPSNPRLKFSISGSSGCKGVPPTSNGKVNVHKSQSVKMNGVVKD 457
SKVEK P P K IS + G K V P+ NG+++ H+ +++ ++
Sbjct: 405 EQALQEDNLLSSKVEKAPLKPHAKVIISVNLGAKRVSPSVNGRLSFHQDENIAPKANKEN 464
Query: 458 SV----PKEKSGKD-PFINTNGSYKSKRVDLV-GRGNDLASVSTSENGDTQSVGLNPVKP 511
SV + KSG + F NG K G N +V E + G + K
Sbjct: 465 SVSVLPTRVKSGTERKFGTENGGNGVKENGSAPGSSNHKVTVHPHERSNGSCNGGDHYKD 524
Query: 512 DPHEGNCTSSRTTAGRVPDPAKLLNGSVKFDTDISGSKRKSQESCILLAQDSESLAKLQE 571
+ H C S+ + G V + S + S +++ CILL +D S +L+
Sbjct: 525 NLHP--CGSNGSQNGTVHQEIERNGVSTTQSKGLCSS--TNEDPCILLRKDESSRNELEA 580
Query: 572 LEEVLKKEASSVLQSCGWSEKVLSYMRSRKRQCAHEVGITPGDIDLK 618
++E LKK+A S L+SCGW +KV MR++KR + G G+ DLK
Sbjct: 581 IKESLKKDALSHLRSCGWYDKVHISMRAKKRLRTEQSGGEDGN-DLK 626
>gi|18400378|ref|NP_566486.1| ubiquitin carboxyl-terminal hydrolase 25 [Arabidopsis thaliana]
gi|75262798|sp|Q9FPS2.1|UBP25_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 25; AltName:
Full=Deubiquitinating enzyme 25; Short=AtUBP25; AltName:
Full=Ubiquitin thioesterase 25; AltName:
Full=Ubiquitin-specific-processing protease 25
gi|11993490|gb|AAG42763.1|AF302673_1 ubiquitin-specific protease 25 [Arabidopsis thaliana]
gi|60543331|gb|AAX22263.1| At3g14400 [Arabidopsis thaliana]
gi|332641992|gb|AEE75513.1| ubiquitin carboxyl-terminal hydrolase 25 [Arabidopsis thaliana]
Length = 661
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/647 (56%), Positives = 435/647 (67%), Gaps = 53/647 (8%)
Query: 3 LAHELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSS 62
+ +LQMSW PSLLS+KR R GPPLGLRNLGN+CYLNSVLQCLT+TPPLANFCL +HSS
Sbjct: 1 MGFKLQMSWMPSLLSQKR-RNGPPLGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSS 59
Query: 63 LCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQ 122
C D+ +D ERKR+CPFCI+EKRI RSLSVDLT DAP KI SCL+IFAEHFK GRQ
Sbjct: 60 HC-----DTYVDGERKRDCPFCIVEKRIARSLSVDLTTDAPNKISSCLKIFAEHFKLGRQ 114
Query: 123 EDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQV 182
EDAHEFLRYVIDACHNT LRLKKLR G E NG +SVVKEIFGGALQSQV
Sbjct: 115 EDAHEFLRYVIDACHNTSLRLKKLRY---------NGNEPFNG-NSVVKEIFGGALQSQV 164
Query: 183 KCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
KCL+CGAESNK DEIMDISL+IL S S+KE++QKFFQ E+LDGNNKY+C++C+KLV+ARK
Sbjct: 165 KCLSCGAESNKADEIMDISLEILQSSSVKESLQKFFQSEILDGNNKYRCESCEKLVTARK 224
Query: 243 QMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIV 302
QMSILQ+PNILVIQLKRF GIFGGKIDKAI+F E+LVLS+FM KAS+DPQPEYKLFG IV
Sbjct: 225 QMSILQAPNILVIQLKRFGGIFGGKIDKAISFGEILVLSNFMSKASKDPQPEYKLFGIIV 284
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANG 362
HSGFSP+SGHYYAY+KD++GRWYCCNDS+VS+STLQEVLSEK YILFF R+NQRP SA
Sbjct: 285 HSGFSPESGHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEKAYILFFSRSNQRPASAKT 344
Query: 363 TFASNGVKSHE-NGKEAYKGVKGTVPLKAVATKPSAEQSSRK------TPSTI------- 408
SNG SHE NG E K PL KP AEQS +K P
Sbjct: 345 LVTSNGTTSHEVNGCETSNPQKFIGPLNGFNMKPQAEQSFQKGNLASSKPHKFIRPKPRA 404
Query: 409 -----------SKVEKVPSNPRLKFSISGSSGCKGVPPTSNGKVNVHKSQSVKMNGVVKD 457
SKVEK P P K SIS + G K V P NG+++ H+ +++ ++
Sbjct: 405 EQAPLEDNLLSSKVEKAPLRPHAKVSISVNLGAKRVSPV-NGRLSFHQDENIAPKANKEN 463
Query: 458 SV----PKEKSGKD-PFINTNGSYKSKRV-DLVGRGNDLASVSTSENGDTQSVGLNPVKP 511
SV K SG + F NG K G N ++ E + S G + K
Sbjct: 464 SVSVLPTKVNSGTERKFGTENGGNGVKENGSAPGSSNHKVALHPHERSNGSSNGGDHHKD 523
Query: 512 DPHEGNCTSSRTTAGRVPDPAKLLNGSVKFDTDISGSKRKSQESCILLAQDSESLAKLQE 571
+ H C S+ + G P NG + S K ++ CILL +D S +L+
Sbjct: 524 NLHP--CGSNGSQNG-TAHPETERNGVSTTQSKGLCSSTK-EDPCILLRKDESSRNELEA 579
Query: 572 LEEVLKKEASSVLQSCGWSEKVLSYMRSRKRQCAHEVGITPGDIDLK 618
++E LKK+A S L+SCGW +KVL M ++KR + G G DLK
Sbjct: 580 IKESLKKDALSHLRSCGWYDKVLISMHAKKRLRTEQSGGEDGS-DLK 625
>gi|18086363|gb|AAL57643.1| AT3g14400/MLN21_18 [Arabidopsis thaliana]
Length = 661
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/647 (56%), Positives = 435/647 (67%), Gaps = 53/647 (8%)
Query: 3 LAHELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSS 62
+ +LQMSW PSLLS+KR R GPPLGLRNLGN+CYLNSVLQCLT+TPPLANFCL +HSS
Sbjct: 1 MGFKLQMSWMPSLLSQKR-RNGPPLGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSS 59
Query: 63 LCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQ 122
C D+ +D ERKR+CPFCI+EKRI RSLSVDLT DAP KI SCL+IFAEHFK GR+
Sbjct: 60 HC-----DTYVDGERKRDCPFCIVEKRIARSLSVDLTTDAPNKISSCLKIFAEHFKLGRE 114
Query: 123 EDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQV 182
EDAHEFLRYVIDACHNT LRLKKLR G E NG +SVVKEIFGGALQSQV
Sbjct: 115 EDAHEFLRYVIDACHNTSLRLKKLRY---------NGNEPFNG-NSVVKEIFGGALQSQV 164
Query: 183 KCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
KCL+CGAESNK DEIMDISL+IL S S+KE++QKFFQ E+LDGNNKY+C++C+KLV+ARK
Sbjct: 165 KCLSCGAESNKADEIMDISLEILQSSSVKESLQKFFQSEILDGNNKYRCESCEKLVTARK 224
Query: 243 QMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIV 302
QMSILQ+PNILVIQLKRF GIFGGKIDKAI+F E+LVLS+FM KAS+DPQPEYKLFG IV
Sbjct: 225 QMSILQAPNILVIQLKRFGGIFGGKIDKAISFGEILVLSNFMSKASKDPQPEYKLFGIIV 284
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANG 362
HSGFSP+SGHYYAY+KD++GRWYCCNDS+VS+STLQEVLSEK YILFF R+NQRP SA
Sbjct: 285 HSGFSPESGHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEKAYILFFSRSNQRPASAKT 344
Query: 363 TFASNGVKSHE-NGKEAYKGVKGTVPLKAVATKPSAEQSSRK------TPSTI------- 408
SNG SHE NG E K PL KP AEQS +K P
Sbjct: 345 LVTSNGTTSHEVNGCETSNPQKFIGPLNGFNMKPQAEQSFQKGNLASSKPHKFIRPKPRA 404
Query: 409 -----------SKVEKVPSNPRLKFSISGSSGCKGVPPTSNGKVNVHKSQSVKMNGVVKD 457
SKVEK P P K SIS + G K V P NG+++ H+ +++ ++
Sbjct: 405 EQAPLEDNLLSSKVEKAPLRPHAKVSISVNLGAKRVSPV-NGRLSFHQDENIAPKANKEN 463
Query: 458 SV----PKEKSGKD-PFINTNGSYKSKRV-DLVGRGNDLASVSTSENGDTQSVGLNPVKP 511
SV K SG + F NG K G N ++ E + S G + K
Sbjct: 464 SVSVLPTKVNSGTERKFGTENGGNGVKENGSAPGSSNHKVALHPHERSNGSSNGGDHHKD 523
Query: 512 DPHEGNCTSSRTTAGRVPDPAKLLNGSVKFDTDISGSKRKSQESCILLAQDSESLAKLQE 571
+ H C S+ + G P NG + S K ++ CILL +D S +L+
Sbjct: 524 NLHP--CGSNGSQNG-TAHPETERNGVSTTQSKGLCSSTK-EDPCILLRKDESSRNELEA 579
Query: 572 LEEVLKKEASSVLQSCGWSEKVLSYMRSRKRQCAHEVGITPGDIDLK 618
++E LKK+A S L+SCGW +KVL M ++KR + G G DLK
Sbjct: 580 IKESLKKDALSHLRSCGWYDKVLISMHAKKRLRTEQSGGEDGS-DLK 625
>gi|9279587|dbj|BAB01045.1| unnamed protein product [Arabidopsis thaliana]
Length = 632
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 342/647 (52%), Positives = 407/647 (62%), Gaps = 82/647 (12%)
Query: 3 LAHELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSS 62
+ +LQMSW PSLLS+KR R GPPLGLRNLGN+CYLNSVLQCLT+TPPLANFCL +HSS
Sbjct: 1 MGFKLQMSWMPSLLSQKR-RNGPPLGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSS 59
Query: 63 LCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQ 122
C D+ +D ERKR+CPFCI+EKRI RSLSVDLT DAP KI SCL+IFAEHFK GRQ
Sbjct: 60 HC-----DTYVDGERKRDCPFCIVEKRIARSLSVDLTTDAPNKISSCLKIFAEHFKLGRQ 114
Query: 123 EDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQV 182
EDAHEFLRYVIDACHNT LRLKKLR G E NG +SVVKEIFGGALQSQV
Sbjct: 115 EDAHEFLRYVIDACHNTSLRLKKLRY---------NGNEPFNG-NSVVKEIFGGALQSQV 164
Query: 183 KCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
KCL+CGAESNK DEIMDISL+IL S S+KE++QKFFQ E+LDGNNKY+C++C+KLV+ARK
Sbjct: 165 KCLSCGAESNKADEIMDISLEILQSSSVKESLQKFFQSEILDGNNKYRCESCEKLVTARK 224
Query: 243 QMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIV 302
QMSILQ+PNILVIQLKRF GIFGGKIDKAI+F E+LVLS+FM KAS
Sbjct: 225 QMSILQAPNILVIQLKRFGGIFGGKIDKAISFGEILVLSNFMSKAS-------------- 270
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANG 362
KD++GRWYCCNDS+VS+STLQEVLSEK YILFF R+NQRP SA
Sbjct: 271 ---------------KDSLGRWYCCNDSFVSLSTLQEVLSEKAYILFFSRSNQRPASAKT 315
Query: 363 TFASNGVKSHE-NGKEAYKGVKGTVPLKAVATKPSAEQSSRK------TPSTI------- 408
SNG SHE NG E K PL KP AEQS +K P
Sbjct: 316 LVTSNGTTSHEVNGCETSNPQKFIGPLNGFNMKPQAEQSFQKGNLASSKPHKFIRPKPRA 375
Query: 409 -----------SKVEKVPSNPRLKFSISGSSGCKGVPPTSNGKVNVHKSQSVKMNGVVKD 457
SKVEK P P K SIS + G K V P NG+++ H+ +++ ++
Sbjct: 376 EQAPLEDNLLSSKVEKAPLRPHAKVSISVNLGAKRVSPV-NGRLSFHQDENIAPKANKEN 434
Query: 458 SV----PKEKSGKD-PFINTNGSYKSKRVDLV-GRGNDLASVSTSENGDTQSVGLNPVKP 511
SV K SG + F NG K G N ++ E + S G + K
Sbjct: 435 SVSVLPTKVNSGTERKFGTENGGNGVKENGSAPGSSNHKVALHPHERSNGSSNGGDHHKD 494
Query: 512 DPHEGNCTSSRTTAGRVPDPAKLLNGSVKFDTDISGSKRKSQESCILLAQDSESLAKLQE 571
+ H C S+ + G P NG + S K ++ CILL +D S +L+
Sbjct: 495 NLHP--CGSNGSQNG-TAHPETERNGVSTTQSKGLCSSTK-EDPCILLRKDESSRNELEA 550
Query: 572 LEEVLKKEASSVLQSCGWSEKVLSYMRSRKRQCAHEVGITPGDIDLK 618
++E LKK+A S L+SCGW +KVL M ++KR + G G DLK
Sbjct: 551 IKESLKKDALSHLRSCGWYDKVLISMHAKKRLRTEQSGGEDGS-DLK 596
>gi|357133052|ref|XP_003568142.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like
[Brachypodium distachyon]
Length = 641
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 267/606 (44%), Positives = 367/606 (60%), Gaps = 41/606 (6%)
Query: 30 RNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKR 89
+NLGN+CYLNSVLQCL TPPLANFCL +HS+LC+++ + R +EC FC+LE++
Sbjct: 25 KNLGNTCYLNSVLQCLASTPPLANFCLNSRHSNLCQKVFPN------RDKECAFCVLERQ 78
Query: 90 IVRSLSVDL-TLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRR 148
IVR L + LD+P KI CL +FAEHF+ GRQEDAHEFLRYVIDACH CLR++K R
Sbjct: 79 IVRMLRAEAGALDSPGKIIRCLPLFAEHFRWGRQEDAHEFLRYVIDACHTACLRVRK--R 136
Query: 149 KGGGSSGGGGGGETINGGSS--VVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
S+ G G E G + +++E FGGAL SQVKCL C ESNK DEIMDISLD+L
Sbjct: 137 LPAASANGDCGQEEGRGQGNCMLMRETFGGALLSQVKCLVCKGESNKTDEIMDISLDLLG 196
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
S S+ +A+ FF+PE+L+G NKY C+ CKKL SARKQM IL++P +LVIQLKRFEGI GG
Sbjct: 197 SSSVGDALACFFRPELLEGANKYSCERCKKLTSARKQMFILRAPKVLVIQLKRFEGINGG 256
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI++ I F+E L+LS FM +QD QP Y LF +IVHSGFSP+SGHYYAY+KD+IGRWYC
Sbjct: 257 KINRNIGFKESLILSDFMYNKNQDSQPVYNLFASIVHSGFSPESGHYYAYVKDSIGRWYC 316
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKSHENGKEAYKGVKGTV 386
CNDS+VS+S+ Q+VLSEKVYILF+I +++ ++S+ VKS +
Sbjct: 317 CNDSHVSLSSSQDVLSEKVYILFYILSSKTQKHCTNGYSSSAVKSSNTNGNGISSATCSE 376
Query: 387 PLKAVATKPSAEQSSRKTPSTISKVEKVPSNPRLKFSISGSSGCKGVPPTSNGKVNVHKS 446
PLK K + S + K K+ +K ++G + V +SNGK +++
Sbjct: 377 PLKIQLVKQNGPCSIKGIAPLPLKNGKIAPGAHVKPIHLKNTGTEKV--SSNGKQDLNLR 434
Query: 447 QSVKMNGVVKDSVPKEKSGKDPFINTNGSYKSKRVDLVGRGNDLASVSTSENGDTQSVGL 506
++NG V ++P E +G +P +NG ++D+ D + +G+
Sbjct: 435 NKPEVNGNV--TLP-ESNGCEPG-KSNGIISCDKMDV-----DSQRMLQDADGNGH---- 481
Query: 507 NPVKPDPHEGNCTSSRTTAGRVP-----DPAKLLNGSVKFDTDISGSKRKSQE------- 554
P+ + T A + P D A L+ +++ + GS E
Sbjct: 482 -PIHSADLQETTIDKATCAEKYPEQPSNDAASTLDKNIRSKENSKGSVLHHDEVPVNSVK 540
Query: 555 SCILLAQDSESLAKLQE--LEEVLKKEASSVLQSCGWSEKVLSYMRSRKRQCAHEVGITP 612
+ A+DS L E +E+L + ASS L+SCGW + V +MRS KR+C GI
Sbjct: 541 EVVASAKDSALKHHLGEGKFKEMLAESASSELRSCGWVDDVYQFMRSTKRRCIENTGIAQ 600
Query: 613 GDIDLK 618
+ +++
Sbjct: 601 DNDEIR 606
>gi|218197083|gb|EEC79510.1| hypothetical protein OsI_20578 [Oryza sativa Indica Group]
Length = 644
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 269/606 (44%), Positives = 364/606 (60%), Gaps = 46/606 (7%)
Query: 29 LRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEK 88
L+NLGN+CYLNSVLQCL TPPLA FCL +HS+LCK++ + + +EC FC++E+
Sbjct: 25 LKNLGNTCYLNSVLQCLASTPPLATFCLSFRHSNLCKKVLPN------KDKECVFCVVER 78
Query: 89 RIVRSLSVDL-TLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+I R L + LD+PAKI CL +FAEHF+ GRQEDAHEFLRY+IDACH LR++K R
Sbjct: 79 QISRLLRTEAGALDSPAKIIRCLPLFAEHFRWGRQEDAHEFLRYIIDACHTAGLRIRK-R 137
Query: 148 RKGGGSSGGGGGGET-INGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
++G G E + G V+KE FGGAL SQVKCL C ESNK DEIMDISLD+
Sbjct: 138 LPASNANGDAGEEEVWVQGPCMVMKETFGGALLSQVKCLTCKGESNKTDEIMDISLDLPG 197
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
S S+ +A+ +FFQPE+L+G+NKY C+ CKKL SARKQ+ +L++P +LVIQLKRFEGI GG
Sbjct: 198 SNSVADALARFFQPEILEGSNKYSCERCKKLTSARKQLFVLRAPKVLVIQLKRFEGINGG 257
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI++ I F+E L LS FM +QD P Y LFG+IVHSGFSPDSGHYYAY+KDAIGRWYC
Sbjct: 258 KINRNIEFKETLFLSDFMYNKNQDSLPVYNLFGSIVHSGFSPDSGHYYAYVKDAIGRWYC 317
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRA--NQRPVSANGTFASNGVKSHENGKEAYKGVKG 384
CNDS++S S+ Q+VLSEKVYILF+I + Q+P S NG +S S+ NG
Sbjct: 318 CNDSHISPSSSQDVLSEKVYILFYILSTKTQKP-STNGYSSSAAKSSNSNGN-GISNATS 375
Query: 385 TVPLKAVATKPSAEQSSRKTPSTISKVEKVPSNPRLKFSISGSSGCKGVPPTSNGKVNVH 444
PLK K + SS+ K K+ LK ++G V +SNGK ++
Sbjct: 376 NEPLKIPLVKQNGLCSSKGIAPPPLKNGKIAPGMHLKPIHLKNNGTGKV--SSNGKASII 433
Query: 445 KSQSVKMN-GVVKDSVPKEKSGK--DPF-INTNGSYKSKRVDLVGRGNDLASVSTSENGD 500
++++ G+ +V SGK +P +N NGS + D+ + V + NG+
Sbjct: 434 PGNKLEVSEGLTLPAVNGRDSGKYAEPGKMNANGSVSCNKTDV-----NSQRVLPNTNGN 488
Query: 501 TQSVGLNPVKPDPH-EGNCT---SSRTTAGRVPD---PAKLLNGSVKFDTDISGSKRKSQ 553
+ + ++ + C S +++ + D P S D+ S
Sbjct: 489 GNPIHFSDLQETTDAKATCAEQYSEKSSIASLEDSKNPVSCHEMSAVIVKDVVSS----- 543
Query: 554 ESCILLAQDSESLA-KLQE--LEEVLKKEASSVLQSCGWSEKVLSYMRSRKRQCAHEVGI 610
+DS SL +L+E +E+L + ASS L GW + V ++M + KR+ G
Sbjct: 544 ------GKDSSSLKHRLEEGKFKEMLAESASSELHLSGWVDDVRNFMHTIKRRRLQNTG- 596
Query: 611 TPGDID 616
TP D D
Sbjct: 597 TPQDSD 602
>gi|115464817|ref|NP_001056008.1| Os05g0510300 [Oryza sativa Japonica Group]
gi|113579559|dbj|BAF17922.1| Os05g0510300 [Oryza sativa Japonica Group]
gi|215767681|dbj|BAG99909.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 644
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 268/606 (44%), Positives = 361/606 (59%), Gaps = 46/606 (7%)
Query: 29 LRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEK 88
L+NLGN+CYLNSVLQCL TPPLA FCL +HS+LCK++ + + +EC FC++E+
Sbjct: 25 LKNLGNTCYLNSVLQCLASTPPLATFCLSFRHSNLCKKVLPN------KDKECVFCVVER 78
Query: 89 RIVRSLSVDL-TLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+I R L + LD+PAKI CL +FAEHF+ GRQEDAHEFLRY+IDACH LR++K R
Sbjct: 79 QISRLLRTEAGALDSPAKIIRCLPLFAEHFRWGRQEDAHEFLRYIIDACHTAGLRIRK-R 137
Query: 148 RKGGGSSGGGGGGET-INGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
++G G E + G V+KE FGGAL SQVKCL C ESNK DEIMDISLD+
Sbjct: 138 LPASNANGDAGEEEVRVQGPYMVMKETFGGALLSQVKCLTCKGESNKTDEIMDISLDLPG 197
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
S S+ +A+ +FFQPE+L+G+NKY C+ CKKL SARKQ+ +L++P +LVIQLKRFEGI GG
Sbjct: 198 SNSVADALARFFQPEILEGSNKYSCERCKKLTSARKQLFVLRAPKVLVIQLKRFEGINGG 257
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI++ I F+E L LS FM +QD P Y LFG+IVHSGFSPDSGHYYAY+KDAIGRWYC
Sbjct: 258 KINRNIEFKETLFLSDFMYNKNQDSLPVYNLFGSIVHSGFSPDSGHYYAYVKDAIGRWYC 317
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRA--NQRPVSANGTFASNGVKSHENGKEAYKGVKG 384
CNDS++S S+ Q+VLSEKVYILF+I + Q+P S NG +S S+ NG
Sbjct: 318 CNDSHISPSSSQDVLSEKVYILFYILSTKTQKP-STNGYSSSAAKSSNSNGN-GISNATS 375
Query: 385 TVPLKAVATKPSAEQSSRKTPSTISKVEKVPSNPRLKFSISGSSGCKGVPPTSNGKVNVH 444
PLK K + SS+ K K+ LK ++G V +SNGK ++
Sbjct: 376 NEPLKIPLVKQNGLCSSKGIAPPPLKNGKIAPGMHLKPIHLKNNGTGKV--SSNGKASII 433
Query: 445 KSQSVKMN-GVVKDSVPKEKSGK--DPF-INTNGSYKSKRVDLVGRGNDLASVSTSENGD 500
++++ G+ +V SGK +P +N NGS + D+ + V + NG+
Sbjct: 434 PGNKLEVSEGLTLPAVNGRDSGKYAEPGKMNANGSVSCNKTDV-----NSQRVLPNTNGN 488
Query: 501 TQSVGLNPVKPD-PHEGNCT---SSRTTAGRVPD---PAKLLNGSVKFDTDISGSKRKSQ 553
+ + ++ + C S +++ + D P S D+ S
Sbjct: 489 GNPIHFSDLQETIDAKATCAEQYSEKSSIASLEDSKNPVSCHEMSAVIVKDVVSS----- 543
Query: 554 ESCILLAQDSESLAKLQE---LEEVLKKEASSVLQSCGWSEKVLSYMRSRKRQCAHEVGI 610
+DS SL E +E+L + ASS L GW + V ++M + KR+ G
Sbjct: 544 ------GKDSSSLKHHLEEGKFKEMLAESASSELHLSGWVDDVRNFMHTIKRRRLQNTG- 596
Query: 611 TPGDID 616
TP D D
Sbjct: 597 TPQDSD 602
>gi|226506140|ref|NP_001147905.1| UBP25 [Zea mays]
gi|195614492|gb|ACG29076.1| UBP25 [Zea mays]
Length = 644
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 253/605 (41%), Positives = 349/605 (57%), Gaps = 46/605 (7%)
Query: 18 EKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAER 77
++R R GPP GL+NL N+CYLN VLQCL TPPLA FCL HS +CK+++ + R
Sbjct: 13 QRRPRTGPPPGLKNLSNTCYLNCVLQCLASTPPLATFCLASGHSDICKKVSPN------R 66
Query: 78 KRECPFCILEKRIVRSLSVDL-TLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDAC 136
+EC FC+LE++I R L D LD+PAK+ C+ +FAEHF+ GRQEDAHEFLRYV+DAC
Sbjct: 67 DKECAFCVLERQIARLLRADAGALDSPAKVIRCMPLFAEHFRWGRQEDAHEFLRYVVDAC 126
Query: 137 HNTCLRLKKLRRKGG--GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKV 194
H LR +KL G G+ G G G+ G V++E FGGAL SQVKCL C ESNK
Sbjct: 127 HTAGLRTRKLLLAKGANGNCGEDGRGQ---GACLVMRETFGGALLSQVKCLVCNRESNKT 183
Query: 195 DEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
DEIMDISLD+ S S+ +A+ +FF+PE+L+G NKY C+ CK L SA+KQM +L++P +LV
Sbjct: 184 DEIMDISLDLPGSSSVADALARFFKPEILEGANKYSCERCKTLTSAQKQMFMLRAPKVLV 243
Query: 255 IQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYY 314
IQLKRFEGI GGKI++ I F+E L +S M SQDPQP Y LFG IVHSG SP+SGHYY
Sbjct: 244 IQLKRFEGINGGKINRNIEFKETLGISDCMYNKSQDPQPVYNLFGCIVHSGLSPESGHYY 303
Query: 315 AYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKSHEN 374
AY+KD G+W+CCNDS+VS+S+ Q VLSEKVYILF+I ++ S+ ++ K
Sbjct: 304 AYVKDPSGQWFCCNDSHVSLSSSQNVLSEKVYILFYILNSKTQKSSTNGYSFTAAKPFST 363
Query: 375 GKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKVEKVPSNPRLK-FSISGSSGCKGV 433
+ K K + + ++ + K S P +K S+ K
Sbjct: 364 NVIDISSTSPSETSKIPLVKQNDLRLAKGNVLMPLRNGKTASGPLIKPIHFKNSAAEKAT 423
Query: 434 PPTSNGKVNVHKSQSVKMNGVVKDSV-----------PKEKSGKDPFINTNGSYKSKRVD 482
P NGK+N+ + ++N VK S P + + + G +S+R+
Sbjct: 424 P---NGKINLTSKINPEVNETVKLSESNGCKTEHFVGPSKINANNTISCGEGGEQSERIL 480
Query: 483 LVGRGNDLASVSTSENGDTQSVGLNPVKPDPHEGNCTSSR--TTAGRVPDPAKLLNGSV- 539
GN + G+T P + GN T ++ T+ G+ + GS
Sbjct: 481 QDANGNGQPIHQSQYLGETSIGNATPAQQVTSNGNATPAQQETSNGKASHAEQCFEGSSH 540
Query: 540 -KFDTDISGSKRKSQESCILLAQDSESLAKLQELEEVLKKEASSVLQSCGWSEKVLSYMR 598
K + SG+KR+ +E + +++L K ASS L+ W + V ++MR
Sbjct: 541 QKEHANSSGNKRQLEE---------------DKFQKMLAKSASSELRLSVWMDDVYNFMR 585
Query: 599 SRKRQ 603
S+KR+
Sbjct: 586 SQKRR 590
>gi|302780611|ref|XP_002972080.1| hypothetical protein SELMODRAFT_2133 [Selaginella moellendorffii]
gi|300160379|gb|EFJ26997.1| hypothetical protein SELMODRAFT_2133 [Selaginella moellendorffii]
Length = 303
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/325 (58%), Positives = 234/325 (72%), Gaps = 24/325 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
G +NLGN+CYLNSVLQCLTYTPPLAN+CL+ QHS C D A A CPFC+LE
Sbjct: 1 GFKNLGNTCYLNSVLQCLTYTPPLANYCLRGQHSKQC-----DGANSA-----CPFCMLE 50
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
RI RS +++ +DAP +I L+ FA+HF+ GRQEDAHE LRY IDAC + C RL+K
Sbjct: 51 NRISRSFDIEVPVDAPQRIYKYLQTFAKHFRAGRQEDAHELLRYAIDACDSACARLQK-- 108
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+G SS +V+KEIFGG LQSQ+ CL+C A S+K+D +MD+SLDI+ +
Sbjct: 109 -RGSKSSD-----------QTVMKEIFGGFLQSQIWCLSCNAVSSKLDSVMDLSLDIVRT 156
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
+LKEA+ FFQPEVLDGNNKY+C+ CKKL ARKQ+SI QSPN+LVIQLKRFE GGK
Sbjct: 157 KTLKEAICNFFQPEVLDGNNKYQCEKCKKLSVARKQLSIYQSPNVLVIQLKRFENFLGGK 216
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
ID + FEE L L S M K S D P+Y L+ +VHSGFS GHYYAY+KD G+WYCC
Sbjct: 217 IDTHVEFEEELKLRSHMSKNSPDVHPDYSLYAVVVHSGFSQYGGHYYAYVKDPRGQWYCC 276
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR 352
NDS+VS ++ VLSE+VYILF++R
Sbjct: 277 NDSFVSAASSATVLSERVYILFYVR 301
>gi|302781702|ref|XP_002972625.1| hypothetical protein SELMODRAFT_2140 [Selaginella moellendorffii]
gi|300160092|gb|EFJ26711.1| hypothetical protein SELMODRAFT_2140 [Selaginella moellendorffii]
Length = 303
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/325 (58%), Positives = 234/325 (72%), Gaps = 24/325 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
G +NLGN+CYLNSVLQCLTYTPPLAN+CL+ QHS C D A A CPFC+LE
Sbjct: 1 GFKNLGNTCYLNSVLQCLTYTPPLANYCLRGQHSKQC-----DGANSA-----CPFCMLE 50
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
RI RS +++ +DAP +I L+ FA+HF+ GRQEDAHE LRY IDAC + C RL+K
Sbjct: 51 NRISRSFDIEVPVDAPQRIYKYLQTFAKHFRAGRQEDAHELLRYAIDACDSACARLQK-- 108
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+G SS +V+KEIFGG LQSQ+ CL+C A S+K+D +MD+SLDI+ +
Sbjct: 109 -RGSKSSD-----------QTVMKEIFGGFLQSQIWCLSCNAVSSKLDSVMDLSLDIVRT 156
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
+LKEA+ FFQPEVLDGNNKY+C+ CKKL ARKQ+SI QSPN+LVIQLKRFE GGK
Sbjct: 157 KTLKEAICNFFQPEVLDGNNKYQCEKCKKLSVARKQLSIYQSPNVLVIQLKRFENFLGGK 216
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
ID + FEE L L S M K S D P+Y L+ +VHSGFS GHYYAY+KD G+WYCC
Sbjct: 217 IDAHVEFEEELKLRSHMSKNSPDVHPDYSLYAVVVHSGFSQYGGHYYAYVKDPRGQWYCC 276
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR 352
NDS+VS ++ VLSE+VYILF++R
Sbjct: 277 NDSFVSAASSATVLSERVYILFYVR 301
>gi|168013682|ref|XP_001759420.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689350|gb|EDQ75722.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 304
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/326 (55%), Positives = 237/326 (72%), Gaps = 25/326 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CYLNSVLQCLTYTPPLANFC+ HS LC + CPFC LE
Sbjct: 1 GLKNLGNTCYLNSVLQCLTYTPPLANFCMSNLHSILCT---------SPNNSNCPFCFLE 51
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
RI RSL+ + +DAP KI + L+ FA+HF+ GRQEDAHE LRY I+AC++ C++L K+
Sbjct: 52 LRIQRSLTFEGPIDAPIKIHNRLQYFAKHFRNGRQEDAHELLRYAIEACNHVCVQLHKIV 111
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+ G ++VVKEIFGG LQSQVKCL+C ESNK+DEIMD++LDI+
Sbjct: 112 QVGSKEEP-----------NTVVKEIFGGLLQSQVKCLSCSTESNKLDEIMDLTLDIVRL 160
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
SL EA+ +FFQPEVLDG NKY+CD CKKL ARKQMS+ ++PN+LVIQ+KRFE I+GGK
Sbjct: 161 SSLSEALCRFFQPEVLDGENKYRCDQCKKLSPARKQMSVYRAPNVLVIQMKRFEDIYGGK 220
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
ID+ + FEE L L+ +MC+A + Y L+G +VH+G S DSGHYY+Y+K++ G+WYCC
Sbjct: 221 IDRHVHFEERLCLAGYMCRAGK-----YSLYGVVVHAGSSQDSGHYYSYVKESSGKWYCC 275
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRA 353
+D+ VS Q VL+EK Y+LF++R+
Sbjct: 276 DDARVSQVNAQTVLAEKAYMLFYVRS 301
>gi|48475065|gb|AAT44134.1| unknown protein, contains ubiquitin carboxyl-terminal hydrolase
[Oryza sativa Japonica Group]
Length = 626
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 240/558 (43%), Positives = 326/558 (58%), Gaps = 40/558 (7%)
Query: 77 RKRECPFCILEKRIVRSLSVDL-TLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDA 135
+ +EC FC++E++I R L + LD+PAKI CL +FAEHF+ GRQEDAHEFLRY+IDA
Sbjct: 49 KDKECVFCVVERQISRLLRTEAGALDSPAKIIRCLPLFAEHFRWGRQEDAHEFLRYIIDA 108
Query: 136 CHNTCLRLKKLRRKGGGSSGGGGGGET-INGGSSVVKEIFGGALQSQVKCLACGAESNKV 194
CH LR++K R ++G G E + G V+KE FGGAL SQVKCL C ESNK
Sbjct: 109 CHTAGLRIRK-RLPASNANGDAGEEEVRVQGPYMVMKETFGGALLSQVKCLTCKGESNKT 167
Query: 195 DEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
DEIMDISLD+ S S+ +A+ +FFQPE+L+G+NKY C+ CKKL SARKQ+ +L++P +LV
Sbjct: 168 DEIMDISLDLPGSNSVADALARFFQPEILEGSNKYSCERCKKLTSARKQLFVLRAPKVLV 227
Query: 255 IQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYY 314
IQLKRFEGI GGKI++ I F+E L LS FM +QD P Y LFG+IVHSGFSPDSGHYY
Sbjct: 228 IQLKRFEGINGGKINRNIEFKETLFLSDFMYNKNQDSLPVYNLFGSIVHSGFSPDSGHYY 287
Query: 315 AYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA--NQRPVSANGTFASNGVKSH 372
AY+KDAIGRWYCCNDS++S S+ Q+VLSEKVYILF+I + Q+P S NG +S S+
Sbjct: 288 AYVKDAIGRWYCCNDSHISPSSSQDVLSEKVYILFYILSTKTQKP-STNGYSSSAAKSSN 346
Query: 373 ENGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKVEKVPSNPRLKFSISGSSGCKG 432
NG PLK K + SS+ K K+ LK ++G
Sbjct: 347 SNGN-GISNATSNEPLKIPLVKQNGLCSSKGIAPPPLKNGKIAPGMHLKPIHLKNNGTGK 405
Query: 433 VPPTSNGKVNVHKSQSVKMN-GVVKDSVPKEKSGK--DPF-INTNGSYKSKRVDLVGRGN 488
V +SNGK ++ ++++ G+ +V SGK +P +N NGS + D+
Sbjct: 406 V--SSNGKASIIPGNKLEVSEGLTLPAVNGRDSGKYAEPGKMNANGSVSCNKTDV----- 458
Query: 489 DLASVSTSENGDTQSVGLNPVKPD-PHEGNCT---SSRTTAGRVPD---PAKLLNGSVKF 541
+ V + NG+ + + ++ + C S +++ + D P S
Sbjct: 459 NSQRVLPNTNGNGNPIHFSDLQETIDAKATCAEQYSEKSSIASLEDSKNPVSCHEMSAVI 518
Query: 542 DTDISGSKRKSQESCILLAQDSESLAKLQE---LEEVLKKEASSVLQSCGWSEKVLSYMR 598
D+ S +DS SL E +E+L + ASS L GW + V ++M
Sbjct: 519 VKDVVSS-----------GKDSSSLKHHLEEGKFKEMLAESASSELHLSGWVDDVRNFMH 567
Query: 599 SRKRQCAHEVGITPGDID 616
+ KR+ G TP D D
Sbjct: 568 TIKRRRLQNTG-TPQDSD 584
>gi|222632186|gb|EEE64318.1| hypothetical protein OsJ_19155 [Oryza sativa Japonica Group]
Length = 628
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 239/560 (42%), Positives = 325/560 (58%), Gaps = 40/560 (7%)
Query: 75 AERKRECPFCILEKRIVRSLSVDL-TLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
AE+ + C++E++I R L + LD+PAKI CL +FAEHF+ GRQEDAHEFLRY+I
Sbjct: 49 AEQGQGVCVCVVERQISRLLRTEAGALDSPAKIIRCLPLFAEHFRWGRQEDAHEFLRYII 108
Query: 134 DACHNTCLRLKKLRRKGGGSSGGGGGGET-INGGSSVVKEIFGGALQSQVKCLACGAESN 192
DACH LR++K R ++G G E + G V+KE FGGAL SQVKCL C ESN
Sbjct: 109 DACHTAGLRIRK-RLPASNANGDAGEEEVRVQGPYMVMKETFGGALLSQVKCLTCKGESN 167
Query: 193 KVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNI 252
K DEIMDISLD+ S S+ +A+ +FFQPE+L+G+NKY C+ CKKL SARKQ+ +L++P +
Sbjct: 168 KTDEIMDISLDLPGSNSVADALARFFQPEILEGSNKYSCERCKKLTSARKQLFVLRAPKV 227
Query: 253 LVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGH 312
LVIQLKRFEGI GGKI++ I F+E L LS FM +QD P Y LFG+IVHSGFSPDSGH
Sbjct: 228 LVIQLKRFEGINGGKINRNIEFKETLFLSDFMYNKNQDSLPVYNLFGSIVHSGFSPDSGH 287
Query: 313 YYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA--NQRPVSANGTFASNGVK 370
YYAY+KDAIGRWYCCNDS++S S+ Q+VLSEKVYILF+I + Q+P S NG +S
Sbjct: 288 YYAYVKDAIGRWYCCNDSHISPSSSQDVLSEKVYILFYILSTKTQKP-STNGYSSSAAKS 346
Query: 371 SHENGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKVEKVPSNPRLKFSISGSSGC 430
S+ NG PLK K + SS+ K K+ LK ++G
Sbjct: 347 SNSNGN-GISNATSNEPLKIPLVKQNGLCSSKGIAPPPLKNGKIAPGMHLKPIHLKNNGT 405
Query: 431 KGVPPTSNGKVNVHKSQSVKMN-GVVKDSVPKEKSGK--DPF-INTNGSYKSKRVDLVGR 486
V +SNGK ++ ++++ G+ +V SGK +P +N NGS + D+
Sbjct: 406 GKV--SSNGKASIIPGNKLEVSEGLTLPAVNGRDSGKYAEPGKMNANGSVSCNKTDV--- 460
Query: 487 GNDLASVSTSENGDTQSVGLNPVKPD-PHEGNCT---SSRTTAGRVPD---PAKLLNGSV 539
+ V + NG+ + + ++ + C S +++ + D P S
Sbjct: 461 --NSQRVLPNTNGNGNPIHFSDLQETIDAKATCAEQYSEKSSIASLEDSKNPVSCHEMSA 518
Query: 540 KFDTDISGSKRKSQESCILLAQDSESLAKLQE---LEEVLKKEASSVLQSCGWSEKVLSY 596
D+ S +DS SL E +E+L + ASS L GW + V ++
Sbjct: 519 VIVKDVVSS-----------GKDSSSLKHHLEEGKFKEMLAESASSELHLSGWVDDVRNF 567
Query: 597 MRSRKRQCAHEVGITPGDID 616
M + KR+ G TP D D
Sbjct: 568 MHTIKRRRLQNTG-TPQDSD 586
>gi|413945993|gb|AFW78642.1| hypothetical protein ZEAMMB73_309285 [Zea mays]
Length = 318
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 153/275 (55%), Positives = 195/275 (70%), Gaps = 12/275 (4%)
Query: 18 EKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAER 77
++R R GPP GL+NL N+CYLN VLQCL TPPLA FCL HS +CK+++ + R
Sbjct: 13 QRRPRTGPPPGLKNLSNTCYLNCVLQCLASTPPLATFCLASGHSDICKKVSPN------R 66
Query: 78 KRECPFCILEKRIVRSLSVDL-TLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDAC 136
+EC FC+LE++I R L D LD+PAK+ C+ +FAEHF+ GRQEDAHEFLRYV+DAC
Sbjct: 67 DKECAFCVLERQIARLLRADAGALDSPAKVIRCMPLFAEHFRWGRQEDAHEFLRYVVDAC 126
Query: 137 HNTCLRLKKLRRKGG--GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKV 194
H LR +KL G G+ G G G+ G V++E FGGAL SQVKCL C ESNK
Sbjct: 127 HTAGLRTRKLLLAKGANGNCGEDGRGQ---GACLVMRETFGGALLSQVKCLVCNRESNKT 183
Query: 195 DEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
DEIMDISLD+ S S+ +A+ +FF+PE+L+G NKY C+ CK L SA+KQM +L++P +LV
Sbjct: 184 DEIMDISLDLPGSSSVADALARFFKPEILEGANKYSCERCKTLTSAQKQMFMLRAPKVLV 243
Query: 255 IQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQ 289
IQLKRFEGI GGKI++ I F+E L +S M SQ
Sbjct: 244 IQLKRFEGINGGKINRNIEFKETLGISDCMYNKSQ 278
>gi|413949782|gb|AFW82431.1| hypothetical protein ZEAMMB73_110675, partial [Zea mays]
Length = 284
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 155/273 (56%), Positives = 192/273 (70%), Gaps = 12/273 (4%)
Query: 20 RKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKR 79
R R GPP GL+NLGN+CYLNSVLQCL TPPLA FCL +HS+ CK++ + R
Sbjct: 15 RPRTGPPPGLKNLGNTCYLNSVLQCLASTPPLATFCLASRHSNQCKKVFPN------RDN 68
Query: 80 ECPFCILEKRIVRSLSVDL-TLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHN 138
+C C+LE++I R L D LD+PAK+ C+ +FAEHF+ GRQEDAHEFLRYV+DACH
Sbjct: 69 DCALCVLERQIARLLRADAGALDSPAKVIRCMPLFAEHFRWGRQEDAHEFLRYVVDACHT 128
Query: 139 TCLRLKKLRRKGGGSSGGGGGGETINGGSS--VVKEIFGGALQSQVKCLACGAESNKVDE 196
LR++K R S G GE + G V++E FGGAL SQVKCL C ESNK DE
Sbjct: 129 ADLRMRKGLRAAAAS---GNCGEDVRGQGVCLVMRETFGGALLSQVKCLECKGESNKTDE 185
Query: 197 IMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQ 256
IMDISLD+ S S+ +A+ +FF PE LDG NKY C++CKKL SARKQM +L++P +LVIQ
Sbjct: 186 IMDISLDLPGSSSVADALSRFFHPETLDGANKYCCESCKKLTSARKQMFMLRAPKVLVIQ 245
Query: 257 LKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQ 289
LKRFEGI GGKI++ I F+E L LS M +Q
Sbjct: 246 LKRFEGINGGKINRNIEFKEALDLSDCMYNKNQ 278
>gi|432921873|ref|XP_004080264.1| PREDICTED: uncharacterized protein LOC101169567 [Oryzias latipes]
Length = 1080
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 137/327 (41%), Positives = 204/327 (62%), Gaps = 26/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+C+LNS LQCLTYTPPLAN L +HS C++ C C ++
Sbjct: 114 GLQNMGNTCFLNSALQCLTYTPPLANHMLSREHSKTCQEPGF-----------CMMCTMQ 162
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I++ + + P + + L+ A+HF+ G QEDAHEFLRY +DA +CL KL
Sbjct: 163 NHIIQVFANSGNVIKPIGVLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLD 222
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
R+ ++ + ++FGG L+S+VKCL+C A S+ D +DI+L+I +
Sbjct: 223 RQ--------------TQATTFIHQVFGGYLRSRVKCLSCKAVSDTFDPFLDITLEIKMA 268
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++F +PE LDG N YKC CKK+V+A K+ +I +SPN+L + LKRF GGK
Sbjct: 269 PSVSKALEQFVKPEQLDGENAYKCTKCKKMVTASKRFTIHRSPNVLTLSLKRFANFTGGK 328
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L L FM ++ +PQ Y L+ +VHSGFS +GHY+ YIK + G+WY
Sbjct: 329 ITKDVKYPESLDLRPFMSQSQGEPQ-NYGLYAVLVHSGFSCHAGHYFCYIKASNGQWYQM 387
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VSVS ++ VL+++ Y+LF+I+ +
Sbjct: 388 NDSSVSVSDIRSVLNQQAYVLFYIKTS 414
>gi|34785787|gb|AAH57482.1| Usp42 protein [Danio rerio]
Length = 985
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 148/362 (40%), Positives = 211/362 (58%), Gaps = 34/362 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS LQCLTYT PLAN+ L +HS C + C C ++
Sbjct: 84 GLHNLGNTCFLNSTLQCLTYTAPLANYMLTREHSKTCHEPGF-----------CMMCTMQ 132
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I++ + + P + + L+ +HF+ G QEDAHEFLRY +DA +CL KL
Sbjct: 133 NHIIQVFANSGNVIKPISVLNELKRIGKHFRFGSQEDAHEFLRYTVDAMQKSCLPGNKLD 192
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
R+ ++ V +IFGG L+S+VKCL C A S+ D +DISL+I +
Sbjct: 193 RQ--------------TQATTFVHQIFGGYLRSRVKCLNCKAVSDTFDPYLDISLEIKTA 238
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
+L +A ++F +PE LDG+N YKC CKK+V+A K+ ++ +S N+L I LKRF GGK
Sbjct: 239 QTLSKAFEQFVKPEQLDGDNAYKCSKCKKMVTASKRFTVHRSSNVLTISLKRFTNFNGGK 298
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L L FM ++ +PQ Y L+ +VHSGFS +GHYY YIK + G+WY
Sbjct: 299 ITKDVRYAEHLDLRPFMSQSHGEPQ-IYALYAVLVHSGFSCHAGHYYCYIKASNGQWYQM 357
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVP 387
NDS VS+S ++ VL+++ Y+LF+IR+ P NG G S N + ++P
Sbjct: 358 NDSSVSLSDIRTVLNQQAYLLFYIRS---PDVKNG-----GDFSQMNHTPGQSSPRPSIP 409
Query: 388 LK 389
LK
Sbjct: 410 LK 411
>gi|28502773|gb|AAH47168.1| Usp42 protein [Danio rerio]
Length = 1016
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 148/362 (40%), Positives = 211/362 (58%), Gaps = 34/362 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS LQCLTYT PLAN+ L +HS C + C C ++
Sbjct: 84 GLHNLGNTCFLNSTLQCLTYTAPLANYMLTREHSKTCHEPGF-----------CMMCTMQ 132
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I++ + + P + + L+ +HF+ G QEDAHEFLRY +DA +CL KL
Sbjct: 133 NHIIQVFANSGNVIKPISVLNELKRIGKHFRFGSQEDAHEFLRYTVDAMQKSCLPGNKLD 192
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
R+ ++ V +IFGG L+S+VKCL C A S+ D +DISL+I +
Sbjct: 193 RQ--------------TQATTFVHQIFGGYLRSRVKCLNCKAVSDTFDPYLDISLEIKTA 238
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
+L +A ++F +PE LDG+N YKC CKK+V+A K+ ++ +S N+L I LKRF GGK
Sbjct: 239 QTLSKAFEQFVKPEQLDGDNAYKCSKCKKMVTASKRFTVHRSSNVLTISLKRFTNFNGGK 298
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L L FM ++ +PQ Y L+ +VHSGFS +GHYY YIK + G+WY
Sbjct: 299 ITKDVRYAEHLDLRPFMSQSHGEPQI-YALYAVLVHSGFSCHAGHYYCYIKASNGQWYQM 357
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVP 387
NDS VS+S ++ VL+++ Y+LF+IR+ P NG G S N + ++P
Sbjct: 358 NDSSVSLSDIRTVLNQQAYLLFYIRS---PDVKNG-----GDFSQMNHTPGQSSPRPSIP 409
Query: 388 LK 389
LK
Sbjct: 410 LK 411
>gi|348502126|ref|XP_003438620.1| PREDICTED: hypothetical protein LOC100709216 [Oreochromis
niloticus]
Length = 1174
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/326 (41%), Positives = 202/326 (61%), Gaps = 26/326 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+C+LNS LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 85 GLQNMGNTCFLNSALQCLTYTPPLANYMLTREHSKTCHEPGF-----------CMMCTMQ 133
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+++ + + P + + L+ A+HF+ G QEDAHEFLRY +DA +CL KL
Sbjct: 134 NHVIQVFANSGNVIKPIGVLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLD 193
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
R+ +S + ++FGG L+S+VKCL C A S+ D +DI+L+I +
Sbjct: 194 RQ--------------TQATSFIHQVFGGYLRSRVKCLNCKAVSDTFDPFLDITLEIKTA 239
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
++ +A+++F +PE LDG N YKC CKK+V+A K+ +I +S N+L + LKRF GGK
Sbjct: 240 PNVSKALEQFVKPEQLDGENAYKCTKCKKMVTASKRFTIHRSANVLTLSLKRFANFSGGK 299
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L L FM ++ +PQ Y L+ +VHSGFS +GHY+ YIK + G+WY
Sbjct: 300 ITKDVKYLEHLDLRPFMSQSQGEPQ-LYGLYAVLVHSGFSCHAGHYFCYIKASNGQWYQM 358
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRA 353
NDS VSVS ++ VL+++ Y+LF+I++
Sbjct: 359 NDSSVSVSDIRTVLNQQAYVLFYIKS 384
>gi|327285944|ref|XP_003227691.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Anolis
carolinensis]
Length = 1283
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 208/351 (59%), Gaps = 33/351 (9%)
Query: 4 AHELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSL 63
A ++ + WQ K R G GL+NLGN+C+LNS LQCLTYTPPLAN+ L +HS
Sbjct: 96 ADKISLKWQ------KMHRVG--AGLQNLGNTCFLNSALQCLTYTPPLANYMLSHEHSKT 147
Query: 64 CKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQE 123
C + + C C ++ I ++LS + P + + LR A+HF+ G QE
Sbjct: 148 CHE-----------QGFCMMCTMQSHITQALSNSGNVIKPMPVINDLRRIAKHFRFGNQE 196
Query: 124 DAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVK 183
DAHEFLRY +DA CL G + ++ + +IFGG L+S+VK
Sbjct: 197 DAHEFLRYTVDAMQKACL-------------NGSNKLDRHTQATTFIHQIFGGYLRSRVK 243
Query: 184 CLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C+ C S+ D +DI+L+I ++ S+ +A+++F +PE LDG N YKC CKK+V A K+
Sbjct: 244 CMNCKGVSDTFDPYLDITLEIKSAQSINKALEQFVKPEQLDGENAYKCSKCKKMVPASKR 303
Query: 244 MSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH 303
++ ++ N+L + LKRF GGKI K + + E L + +M + + +P Y L+ +VH
Sbjct: 304 FTVHRASNVLTLSLKRFANFSGGKITKEVKYPEYLDIRPYMSQPNGEPI-IYALYAVLVH 362
Query: 304 SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRAN 354
+GFS +GHYY YIK + G+WY NDS VS S ++ VL+++ Y+LF+IR++
Sbjct: 363 TGFSCHAGHYYCYIKASNGQWYQMNDSTVSNSDIRTVLNQQAYVLFYIRSH 413
>gi|410896095|ref|XP_003961535.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Takifugu
rubripes]
Length = 1162
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/326 (40%), Positives = 199/326 (61%), Gaps = 26/326 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+C+LNS LQCLTYT P +N+ L +HS C + C C ++
Sbjct: 84 GLQNMGNTCFLNSALQCLTYTAPFSNYMLTREHSKTCHEPGF-----------CMMCTMQ 132
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I++ + + P + + L+ A+HF+ G QEDAHEFLRY +DA +CL KL
Sbjct: 133 NHIIQVFANSGNVIKPIGVLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLD 192
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
R+ ++ + ++FGG L+S+VKCL C A S+ D +DI L+I +
Sbjct: 193 RQ--------------TQATTFIHQVFGGYLRSRVKCLNCKAVSDTFDPFLDIPLEIKTA 238
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++F +PE LDG N YKC CKK+V+A K+ +I +S N+L + LKRF GGK
Sbjct: 239 PSVSKALEQFVKPEQLDGENAYKCTKCKKMVTASKRFTIHRSANVLTLALKRFANFSGGK 298
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L L FM ++ +PQ Y L+ +VHSGFS +GHY+ YIK + G+WY
Sbjct: 299 ITKDVKYPEYLDLRPFMSQSQGEPQ-VYGLYAVLVHSGFSCHAGHYFCYIKASNGQWYQM 357
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRA 353
NDS VS+S ++ VL+++ Y+LF+I++
Sbjct: 358 NDSSVSISDIRSVLNQQAYVLFYIKS 383
>gi|47226066|emb|CAG04440.1| unnamed protein product [Tetraodon nigroviridis]
Length = 535
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 134/326 (41%), Positives = 199/326 (61%), Gaps = 26/326 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+C+LNS LQCLTYT P AN+ L +HS C + C C ++
Sbjct: 30 GLQNMGNTCFLNSALQCLTYTAPFANYMLTREHSKTCHE-----------PGFCMMCTMQ 78
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I++ + + P + + L+ A+HF+ G QEDAHEFLRY +DA +CL KL
Sbjct: 79 NHIIQVFANTGNVIKPIGVLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLD 138
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
R+ ++ + ++FGG L+S+VKCL C A S+ D +DI L+I +
Sbjct: 139 RQ--------------TQATTFIHQVFGGYLRSRVKCLNCKAVSDTFDPFLDIPLEIKTA 184
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++F +PE LDG N YKC CKK+V+A K+ +I +S N+L + LKRF GGK
Sbjct: 185 PSVSKALEQFVKPEQLDGENAYKCTKCKKMVTASKRFTIHRSANVLTLALKRFANFSGGK 244
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L L FM ++ +PQ Y L+ +VHSGFS +GHY+ YIK + G+WY
Sbjct: 245 ITKDVKYPEYLDLRPFMSQSQGEPQ-VYGLYAVLVHSGFSCHAGHYFCYIKASNGQWYQM 303
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRA 353
NDS VS+S ++ VLS++ Y+LF+I++
Sbjct: 304 NDSSVSISDIRSVLSQQAYVLFYIKS 329
>gi|334332968|ref|XP_001377522.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 42 [Monodelphis domestica]
Length = 1371
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 132/327 (40%), Positives = 200/327 (61%), Gaps = 25/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C++N+ LQCLTYTPPLAN+ L +HS +C + + C C ++
Sbjct: 112 GLQNLGNTCFVNAALQCLTYTPPLANYMLSHEHSKICHE-----------QGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I ++L+ + P + + LR A+HF+ G QEDAHEFLRY +DA CL
Sbjct: 161 AHITQALNNPGNVIKPMPVINDLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACL------ 214
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + +++V +IFGG L+S+VKC+ C S+ D +DI L+I +
Sbjct: 215 -------NGSTKLDRHSQATTLVCQIFGGYLRSRVKCMNCKGVSDTFDPYLDIPLEIKAA 267
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GGK
Sbjct: 268 QSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFSGGK 327
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + +P Y L+ +VH+GFS +GHYY YIK + G+WY
Sbjct: 328 IAKDVKYPEYLDIRPYMSQPNGEPII-YVLYAVLVHTGFSCHAGHYYCYIKASNGQWYQM 386
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VL+++ Y+LF+IR++
Sbjct: 387 NDSIVSTSDIRSVLNQQAYVLFYIRSH 413
>gi|395514662|ref|XP_003761533.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Sarcophilus
harrisii]
Length = 1358
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 132/327 (40%), Positives = 200/327 (61%), Gaps = 25/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C++N+ LQCLTYTPPLAN+ L +HS +C + + C C ++
Sbjct: 112 GLQNLGNTCFVNAALQCLTYTPPLANYMLSHEHSKICHE-----------QGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I ++L+ + P + + LR A+HF+ G QEDAHEFLRY +DA CL
Sbjct: 161 AHITQALNNPGNVIKPMPVINDLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACL------ 214
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + +++V +IFGG L+S+VKC+ C S+ D +DI L+I +
Sbjct: 215 -------NGSTKLDRHSQATTLVCQIFGGYLRSRVKCMNCKGVSDTFDPYLDIPLEIKAA 267
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GGK
Sbjct: 268 QSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFSGGK 327
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + +P Y L+ +VH+GFS +GHYY YIK + G+WY
Sbjct: 328 IAKDVKYPEYLDIRPYMSQPNGEPII-YVLYAVLVHTGFSCHAGHYYCYIKASNGQWYQM 386
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VL+++ Y+LF+IR++
Sbjct: 387 NDSIVSTSDIRSVLNQQAYVLFYIRSH 413
>gi|432869264|ref|XP_004071701.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Oryzias
latipes]
Length = 1055
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 139/367 (37%), Positives = 208/367 (56%), Gaps = 35/367 (9%)
Query: 4 AHELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSL 63
A++L + W E+ R G GL NLGN+C+LNS +QCLTYTPPLAN+ L +HS
Sbjct: 107 ANKLTLKW------ERVYRVG--AGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRT 158
Query: 64 CKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQE 123
C Q S C C+++ I+++ + P L+ A HF+ G QE
Sbjct: 159 CHQ----SGF-------CMICVMQNHIIQTFANTGNAIKPVSFIRDLKKIARHFRFGSQE 207
Query: 124 DAHEFLRYVIDACHNTCLR-LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQV 182
DAHEFLRY IDA CL KL R+ +++V +IFGG L+S+V
Sbjct: 208 DAHEFLRYTIDAMQKACLNGYPKLDRQ--------------TQATTLVHQIFGGYLRSRV 253
Query: 183 KCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
KC C + S+ D +DI+++I + ++ A++ F +P+VL G N Y C CKK V A K
Sbjct: 254 KCSICKSVSDTYDPYLDIAVEIRQTANIVRALELFVKPDVLSGENAYMCAKCKKKVPATK 313
Query: 243 QMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIV 302
+ ++ ++ N+L + LKRF GGKI K + + E L + +M ++S DP Y L+ +V
Sbjct: 314 RFTVHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGDPV-MYGLYAVLV 372
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANG 362
HSG+S +GHYY YIK + G+WY NDS V S ++ VL+++ Y+LF++R + +A+G
Sbjct: 373 HSGYSCHAGHYYCYIKASNGQWYQMNDSMVQSSNIKVVLNQQAYVLFYLRIPETKKTADG 432
Query: 363 TFASNGV 369
G+
Sbjct: 433 QTTKTGM 439
>gi|330802246|ref|XP_003289130.1| hypothetical protein DICPUDRAFT_15497 [Dictyostelium purpureum]
gi|325080797|gb|EGC34337.1| hypothetical protein DICPUDRAFT_15497 [Dictyostelium purpureum]
Length = 810
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/345 (41%), Positives = 199/345 (57%), Gaps = 27/345 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N+GN+C++NSVLQCLTY+P LAN+ + +HS C K C FC LE
Sbjct: 183 GLNNIGNTCFMNSVLQCLTYSPTLANYMISREHSKNCT-----------NKSFCIFCSLE 231
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ I+ S P +I + +R A F+ GRQED+HEF+R+VI++ CL
Sbjct: 232 EHIIASHKATGRSITPKEIAANIRKVAPTFRIGRQEDSHEFIRFVIESLQKVCL------ 285
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S G + ++V+ IFGG L+SQVKC C ESN D MD+ +DI +
Sbjct: 286 -----SKFPKGSISHRDSMTTVIGSIFGGYLRSQVKCSVCQYESNTFDPFMDLCVDINQA 340
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFG 265
SL + +Q F + E+LDG+N+YKC CKKLV A K++ I SP IL +Q+KRF G +G
Sbjct: 341 DSLTKGLQNFVKSEILDGSNRYKCSKCKKLVKAAKRLQIHISPPILTVQIKRFSFLGSYG 400
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
GK++K I FE+ L LS +M +A+ Y L+ +VH G S +SGHYY Y+K G WY
Sbjct: 401 GKVNKHIQFEQTLNLSPYMTQAND--HSIYDLYAVLVHLGGSTNSGHYYCYVKGTNGIWY 458
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFI-RANQRPVSANGTFASNGV 369
+DS VS +LQ VL K Y+LF+ R +R ++ N N V
Sbjct: 459 NMDDSMVSQVSLQTVLGSKAYMLFYSKRDTERSINTNTVIPRNIV 503
>gi|354467793|ref|XP_003496353.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like
[Cricetulus griseus]
Length = 1285
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/327 (40%), Positives = 196/327 (59%), Gaps = 25/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C CI++
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCIMQ 159
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL
Sbjct: 160 THITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL------ 213
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + +++V +IFGG L+S+VKCL C S+ D +DI+L+I +
Sbjct: 214 -------NGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAA 266
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L I LKRF GGK
Sbjct: 267 QSVTKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFTGGK 326
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 327 IAKDVKYPEYLDIRPYMSQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQM 385
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VL+++ Y+LF+IR++
Sbjct: 386 NDSIVSTSDIRSVLNQQAYVLFYIRSH 412
>gi|71052117|gb|AAH60846.2| USP42 protein, partial [Homo sapiens]
Length = 1202
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 196/328 (59%), Gaps = 27/328 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL KL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKL 220
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R +++V +IFGG L+S+VKCL C S+ D +DI+L+I
Sbjct: 221 DRH--------------TQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GG
Sbjct: 267 AQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG 326
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 327 KIAKDVKYPEYLDIRPYMSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQ 385
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 386 MNDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|10434352|dbj|BAB14232.1| unnamed protein product [Homo sapiens]
Length = 1198
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 196/328 (59%), Gaps = 27/328 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL KL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKL 220
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R +++V +IFGG L+S+VKCL C S+ D +DI+L+I
Sbjct: 221 DRH--------------TQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GG
Sbjct: 267 AQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG 326
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 327 KIAKDVKYPEYLDIRPYMSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQ 385
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 386 MNDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|119575449|gb|EAW55047.1| ubiquitin specific peptidase 42, isoform CRA_a [Homo sapiens]
Length = 1234
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 196/328 (59%), Gaps = 27/328 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL KL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKL 220
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R +++V +IFGG L+S+VKCL C S+ D +DI+L+I
Sbjct: 221 DRH--------------TQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GG
Sbjct: 267 AQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG 326
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 327 KIAKDVKYPEYLDIRPYMSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQ 385
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 386 MNDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|348525234|ref|XP_003450127.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Oreochromis
niloticus]
Length = 1149
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 132/343 (38%), Positives = 199/343 (58%), Gaps = 27/343 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS +QCLTYTPPLAN+ L +HS +C Q S C C+++
Sbjct: 123 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRVCHQ----SGF-------CMICVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I+++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIIQAFANTGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYPKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +DI+++I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSICKSVSDTYDPYLDIAVEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F +P+VL G N Y C CKK V A K+ ++ ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKPDVLSGENAYMCAKCKKKVPATKRFTVHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M ++S DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGV 369
NDS V S ++ VL+++ Y+LF++R + +A+G G+
Sbjct: 397 MNDSMVHSSNIKVVLNQQAYVLFYLRIPETKKNADGQTTKQGM 439
>gi|397526145|ref|XP_003832997.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Pan paniscus]
Length = 1316
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 196/328 (59%), Gaps = 27/328 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL KL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKL 220
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R +++V +IFGG L+S+VKCL C S+ D +DI+L+I
Sbjct: 221 DRH--------------TQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GG
Sbjct: 267 AQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG 326
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 327 KIAKDVKYPEYLDIRPYMSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQ 385
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 386 MNDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|410266774|gb|JAA21353.1| ubiquitin specific peptidase 42 [Pan troglodytes]
Length = 1316
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 196/328 (59%), Gaps = 27/328 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL KL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKL 220
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R +++V +IFGG L+S+VKCL C S+ D +DI+L+I
Sbjct: 221 DRH--------------TQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GG
Sbjct: 267 AQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG 326
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 327 KIAKDVKYPEYLDIRPYMSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQ 385
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 386 MNDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|395852854|ref|XP_003798945.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Otolemur
garnettii]
Length = 1330
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 196/327 (59%), Gaps = 25/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C CI++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCIMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL------ 214
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + ++ V +IFGG L+S+VKCL C S+ D +DI+L+I +
Sbjct: 215 -------NGSNKLDRHTQATTFVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAA 267
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
++ +A+++F +PE LDG N YKC CKK+V+A K+ +I +S N+L + LKRF GGK
Sbjct: 268 QTVNKALEQFVKPEQLDGENAYKCSKCKKMVTASKRFTIHRSSNVLTLSLKRFANFTGGK 327
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 328 IAKDVKYPEYLDIRPYMSQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQM 386
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 387 NDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|114612043|ref|XP_527662.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Pan
troglodytes]
gi|410215148|gb|JAA04793.1| ubiquitin specific peptidase 42 [Pan troglodytes]
gi|410304720|gb|JAA30960.1| ubiquitin specific peptidase 42 [Pan troglodytes]
Length = 1316
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 196/328 (59%), Gaps = 27/328 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL KL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKL 220
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R +++V +IFGG L+S+VKCL C S+ D +DI+L+I
Sbjct: 221 DRH--------------TQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GG
Sbjct: 267 AQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG 326
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 327 KIAKDVKYPEYLDIRPYMSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQ 385
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 386 MNDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|410902504|ref|XP_003964734.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Takifugu
rubripes]
Length = 1050
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/343 (38%), Positives = 198/343 (57%), Gaps = 27/343 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS +QCLTYTPPLAN+ L +HS C Q S C C+++
Sbjct: 123 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRTCHQ----SGF-------CMICVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I+++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIIQAFANTGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLSGYPKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +DI+++I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSICKSVSDTYDPYLDIAVEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F +P+VL G N Y C CKK V A K+ ++ ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKPDVLSGENAYMCAKCKKKVPATKRFTVHRTSNVLTVSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M ++S DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGV 369
NDS V S ++ VL+++ Y+LF++R + +A+G GV
Sbjct: 397 MNDSLVHSSNIKVVLNQQAYVLFYLRIPETKKNADGLTTKQGV 439
>gi|332265913|ref|XP_003281959.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Nomascus
leucogenys]
Length = 1315
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 196/328 (59%), Gaps = 27/328 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL KL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKL 220
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R +++V +IFGG L+S+VKCL C S+ D +DI+L+I
Sbjct: 221 DRH--------------TQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GG
Sbjct: 267 AQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG 326
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 327 KIAKDVKYPEYLDIRPYMSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQ 385
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 386 MNDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|402862840|ref|XP_003895748.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Papio anubis]
Length = 1316
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 196/328 (59%), Gaps = 27/328 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL KL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKL 220
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R +++V +IFGG L+S+VKCL C S+ D +DI+L+I
Sbjct: 221 DRH--------------TQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GG
Sbjct: 267 AQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG 326
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 327 KIAKDVKYPEYLDIRPYMSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQ 385
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 386 MNDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|79750944|ref|NP_115548.1| ubiquitin carboxyl-terminal hydrolase 42 [Homo sapiens]
gi|124376914|gb|AAI32863.1| Ubiquitin specific peptidase 42 [Homo sapiens]
Length = 1316
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 196/328 (59%), Gaps = 27/328 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL KL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKL 220
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R +++V +IFGG L+S+VKCL C S+ D +DI+L+I
Sbjct: 221 DRH--------------TQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GG
Sbjct: 267 AQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG 326
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 327 KIAKDVKYPEYLDIRPYMSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQ 385
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 386 MNDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|78057011|emb|CAE53097.1| ubiquitin-specific protease 42 [Homo sapiens]
Length = 1325
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 196/328 (59%), Gaps = 27/328 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL KL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKL 220
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R +++V +IFGG L+S+VKCL C S+ D +DI+L+I
Sbjct: 221 DRH--------------TQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GG
Sbjct: 267 AQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG 326
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 327 KIAKDVKYPEYLDIRPYMSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQ 385
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 386 MNDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|157786872|ref|NP_001099379.1| ubiquitin carboxyl-terminal hydrolase 42 [Rattus norvegicus]
gi|322967640|sp|D3ZU96.1|UBP42_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
gi|149034935|gb|EDL89655.1| ubiquitin specific protease 42 (predicted) [Rattus norvegicus]
Length = 1325
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 195/327 (59%), Gaps = 25/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 159
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL
Sbjct: 160 THITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL------ 213
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + +++V +IFGG L+S+VKCL C S+ D +DI+L+I +
Sbjct: 214 -------NGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAA 266
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L I LKRF GGK
Sbjct: 267 QSVTKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFTGGK 326
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 327 IAKDVKYPEYLDIRPYMSQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQM 385
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VL+++ Y+LF+IR++
Sbjct: 386 NDSIVSTSDIRSVLNQQAYVLFYIRSH 412
>gi|322510098|sp|Q9H9J4.3|UBP42_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
Length = 1324
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 196/328 (59%), Gaps = 27/328 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL KL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKL 220
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R +++V +IFGG L+S+VKCL C S+ D +DI+L+I
Sbjct: 221 DRH--------------TQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GG
Sbjct: 267 AQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG 326
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 327 KIAKDVKYPEYLDIRPYMSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQ 385
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 386 MNDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|49616863|gb|AAT67238.1| ubiquitin specific protease 42 [Homo sapiens]
Length = 1324
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 196/328 (59%), Gaps = 27/328 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL KL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKL 220
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R +++V +IFGG L+S+VKCL C S+ D +DI+L+I
Sbjct: 221 DRH--------------TQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GG
Sbjct: 267 AQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG 326
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 327 KIAKDVKYPEYLDIRPYMSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQ 385
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 386 MNDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|51094456|gb|EAL23715.1| ubiquitin specific protease 42 [Homo sapiens]
Length = 1350
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 196/328 (59%), Gaps = 27/328 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL KL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKL 220
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R +++V +IFGG L+S+VKCL C S+ D +DI+L+I
Sbjct: 221 DRH--------------TQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GG
Sbjct: 267 AQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG 326
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 327 KIAKDVKYPEYLDIRPYMSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQ 385
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 386 MNDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|431918189|gb|ELK17417.1| Ubiquitin carboxyl-terminal hydrolase 42 [Pteropus alecto]
Length = 1361
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 195/327 (59%), Gaps = 25/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL------ 214
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + +++V +IFGG L+S+VKCL C S+ D +DI+L+I +
Sbjct: 215 -------NGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAA 267
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GGK
Sbjct: 268 QSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGK 327
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 328 IAKDVKYPEYLDIRPYMSQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQM 386
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 387 NDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|109065910|ref|XP_001090104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Macaca
mulatta]
Length = 1317
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 196/328 (59%), Gaps = 27/328 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL KL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKL 220
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R +++V +IFGG L+S+VKCL C S+ D +DI+L+I
Sbjct: 221 DRH--------------TQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GG
Sbjct: 267 AQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG 326
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 327 KIAKDVKYPEYLDIRPYMSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQ 385
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 386 MNDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|383422111|gb|AFH34269.1| ubiquitin carboxyl-terminal hydrolase 42 [Macaca mulatta]
Length = 1317
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 196/328 (59%), Gaps = 27/328 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL KL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKL 220
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R +++V +IFGG L+S+VKCL C S+ D +DI+L+I
Sbjct: 221 DRH--------------TQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GG
Sbjct: 267 AQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG 326
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 327 KIAKDVKYPEYLDIRPYMSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQ 385
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 386 MNDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|189517356|ref|XP_688241.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Danio rerio]
Length = 1104
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 159/446 (35%), Positives = 235/446 (52%), Gaps = 54/446 (12%)
Query: 5 HELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLC 64
++L M W E+ R G GL NLGN+C+LNS +QCLTYTPPLAN+ L +HS C
Sbjct: 108 NKLSMKW------ERVYRVG--AGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRSC 159
Query: 65 KQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQED 124
Q S C C+++ I+++ + P L+ A HF+ G QED
Sbjct: 160 HQ----SGF-------CMICVMQNHIIQAFANTANAIKPVSFIRDLKKIARHFRFGSQED 208
Query: 125 AHEFLRYVIDACHNTCLR-LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVK 183
AHEFLRY IDA CL KL R+ +++V +IFGG L+S+VK
Sbjct: 209 AHEFLRYTIDAMQKACLNGYPKLDRQ--------------TQATTLVHQIFGGYLRSRVK 254
Query: 184 CLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C C + S+ D +DI+L+I + ++ A++ F +P+VL G N Y C CKK V A K+
Sbjct: 255 CSICKSVSDTYDPYLDIALEIRQAANIVRALELFVKPDVLSGENAYMCAKCKKKVPATKR 314
Query: 244 MSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH 303
++ ++ N+L + LKRF GGKI K + + E L + +M ++S DP Y L+ +VH
Sbjct: 315 FTVHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGDPV-MYGLYAVLVH 373
Query: 304 SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGT 363
SG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R P N
Sbjct: 374 SGYSCHAGHYYCYVKASNGQWYQMNDSMVHSSNIKVVLNQQAYVLFYLRI---PEKKNTD 430
Query: 364 FASNGVKSHENGKEAYKGVKGTV--PLKAVATKPSAEQSSRK-TPSTISKVEKVPSNPRL 420
N V S + K T+ PL S+ Q ++K P+ + K++ V
Sbjct: 431 AKQNMVHSGRTNMTPEQLKKSTLNGPL-------SSPQVTKKLDPAQLRKIQSVDGG--- 480
Query: 421 KFSISGSSGCKGV--PPTSNGKVNVH 444
+ + C G+ P SNG N H
Sbjct: 481 -LGVPVARNCSGLQSPKLSNGTSNSH 505
>gi|403285988|ref|XP_003934290.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Saimiri
boliviensis boliviensis]
Length = 1319
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 196/328 (59%), Gaps = 27/328 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL KL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKL 220
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R +++V +IFGG L+S+VKCL C S+ D +DI+L+I
Sbjct: 221 DRH--------------TQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GG
Sbjct: 267 AQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG 326
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 327 KIAKDVKYPEYLDIRPYMSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQ 385
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 386 MNDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|440899908|gb|ELR51150.1| Ubiquitin carboxyl-terminal hydrolase 42, partial [Bos grunniens
mutus]
Length = 1304
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 195/327 (59%), Gaps = 25/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL------ 214
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + +++V +IFGG L+S+VKCL C S+ D +DI+L+I +
Sbjct: 215 -------NGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAA 267
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GGK
Sbjct: 268 QSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGK 327
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 328 IAKDVKYPEYLDIRPYMSQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQM 386
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 387 NDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|380791957|gb|AFE67854.1| ubiquitin carboxyl-terminal hydrolase 42, partial [Macaca mulatta]
Length = 743
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 196/328 (59%), Gaps = 27/328 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTC-----------HAEGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL KL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKL 220
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R +++V +IFGG L+S+VKCL C S+ D +DI+L+I
Sbjct: 221 DRH--------------TQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GG
Sbjct: 267 AQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG 326
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 327 KIAKDVKYPEYLDIRPYMSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQ 385
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 386 MNDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|331284138|ref|NP_001193568.1| ubiquitin carboxyl-terminal hydrolase 42 [Bos taurus]
gi|296473096|tpg|DAA15211.1| TPA: ubiquitin specific protease 42-like [Bos taurus]
Length = 1325
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 195/327 (59%), Gaps = 25/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL------ 214
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + +++V +IFGG L+S+VKCL C S+ D +DI+L+I +
Sbjct: 215 -------NGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAA 267
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GGK
Sbjct: 268 QSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGK 327
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 328 IAKDVKYPEYLDIRPYMSQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQM 386
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 387 NDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|116686116|ref|NP_084025.2| ubiquitin carboxyl-terminal hydrolase 42 [Mus musculus]
gi|322967639|sp|B2RQC2.1|UBP42_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
gi|148687090|gb|EDL19037.1| ubiquitin specific peptidase 42 [Mus musculus]
gi|187953717|gb|AAI37853.1| Ubiquitin specific peptidase 42 [Mus musculus]
Length = 1324
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 195/327 (59%), Gaps = 25/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 159
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL
Sbjct: 160 THITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL------ 213
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + +++V +IFGG L+S+VKCL C S+ D +DI+L+I +
Sbjct: 214 -------NGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAA 266
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L I LKRF GGK
Sbjct: 267 QSVTKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFTGGK 326
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 327 IAKDVKYPEYLDIRPYMSQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQM 385
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VL+++ Y+LF+IR++
Sbjct: 386 NDSIVSTSDIRAVLNQQAYVLFYIRSH 412
>gi|194218707|ref|XP_001493909.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Equus
caballus]
Length = 1393
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 195/327 (59%), Gaps = 25/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL------ 214
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + +++V +IFGG L+S+VKCL C S+ D +DI+L+I +
Sbjct: 215 -------NGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAA 267
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GGK
Sbjct: 268 QSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGK 327
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 328 IAKDVKYPEYLDIRPYMSQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQM 386
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 387 NDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|73958002|ref|XP_536882.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 isoform 1
[Canis lupus familiaris]
Length = 1331
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 195/327 (59%), Gaps = 25/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL------ 214
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + +++V +IFGG L+S+VKCL C S+ D +DI+L+I +
Sbjct: 215 -------NGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAA 267
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GGK
Sbjct: 268 QSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGK 327
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 328 IAKDVKYPEYLDIRPYMSQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQM 386
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 387 NDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|68533556|gb|AAH98528.1| Usp36 protein [Danio rerio]
Length = 914
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 157/445 (35%), Positives = 236/445 (53%), Gaps = 51/445 (11%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
+L M W E+ R G GL NLGN+C+LNS +QCLTYTPPLAN+ L +HS C
Sbjct: 109 KLSMKW------ERVYRVG--AGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRSCH 160
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
Q +G C C+++ I+++ + P L+ A HF+ G QEDA
Sbjct: 161 Q-SGF----------CMICVMQNHIIQAFANTANAIKPVSFIRDLKKIARHFRFGSQEDA 209
Query: 126 HEFLRYVIDACHNTCLR-LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
HEFLRY IDA CL KL R+ +++V +IFGG L+S+VKC
Sbjct: 210 HEFLRYTIDAMQKACLNGYPKLDRQ--------------TQATTLVHQIFGGYLRSRVKC 255
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
C + S+ D +DI+L+I + ++ A++ F +P+VL G N Y C CKK V A K+
Sbjct: 256 SICKSVSDTYDPYLDIALEIRQAANIVRALELFVKPDVLSGENAYMCAKCKKKVPATKRF 315
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHS 304
++ ++ N+L + LKRF GGKI K + + E L + +M ++S DP Y L+ +VHS
Sbjct: 316 TVHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGDPV-MYGLYAVLVHS 374
Query: 305 GFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTF 364
G+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R ++ +
Sbjct: 375 GYSCHAGHYYCYVKASNGQWYQMNDSMVHSSNIKVVLNQQAYVLFYLRIPEKKNTDASNA 434
Query: 365 ASNGVKSHENGKEAYKGVKGTV--PLKAVATKPSAEQSSRK-TPSTISKVEKVPSNPRLK 421
N V S + K T+ PL S+ Q ++K P+ + K++ V
Sbjct: 435 KQNMVHSGRTNMTPEQLKKSTLNGPL-------SSPQVTKKLDPAQLRKIQSVDGG---- 483
Query: 422 FSISGSSGCKGV--PPTSNGKVNVH 444
+ + C G+ P SNG N H
Sbjct: 484 LGVPVARICSGLQSPKLSNGTSNSH 508
>gi|322967638|sp|E1B9W9.1|UBP42_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
Length = 1333
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 195/327 (59%), Gaps = 25/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL------ 214
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + +++V +IFGG L+S+VKCL C S+ D +DI+L+I +
Sbjct: 215 -------NGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAA 267
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GGK
Sbjct: 268 QSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGK 327
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 328 IAKDVKYPEYLDIRPYMSQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQM 386
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 387 NDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|34784440|gb|AAH57470.1| Usp36 protein [Danio rerio]
Length = 758
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 235/445 (52%), Gaps = 51/445 (11%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
+L M W E+ R G GL NLGN+C+LNS +QCLTYTPPLAN+ L +HS C
Sbjct: 109 KLSMKW------ERVYRVG--AGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRSCH 160
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
Q +G C C+++ I+++ + P L+ A HF+ G QEDA
Sbjct: 161 Q-SG----------FCMICVMQNHIIQAFANTANAIKPVSFIRDLKKIARHFRFGSQEDA 209
Query: 126 HEFLRYVIDACHNTCLR-LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
HEFLRY IDA CL KL R+ +++V +IFGG L+S+VKC
Sbjct: 210 HEFLRYTIDAMQKACLNGYPKLDRQ--------------TQATTLVHQIFGGYLRSRVKC 255
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
C + S+ D +DI+L+I + ++ A++ F +P+VL G N Y C CKK V A K+
Sbjct: 256 SICKSVSDTYDPYLDIALEIRQAANIVRALELFVKPDVLSGENAYMCAKCKKKVPATKRF 315
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHS 304
++ ++ N+L + LKRF GGKI K + + E L + +M ++S DP Y L+ +VH
Sbjct: 316 TVHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGDPV-MYGLYAVLVHP 374
Query: 305 GFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTF 364
G+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R ++ +
Sbjct: 375 GYSCHAGHYYCYVKASNGQWYQMNDSMVHSSNIKVVLNQQAYVLFYLRIPEKKNTDASNA 434
Query: 365 ASNGVKSHENGKEAYKGVKGTV--PLKAVATKPSAEQSSRKT-PSTISKVEKVPSNPRLK 421
N V S + K T+ PL S+ Q ++K P+ + K++ V
Sbjct: 435 KQNMVHSGRTNMTPEQLKKSTLNGPL-------SSPQVTKKLDPAQLRKIQSVDGG---- 483
Query: 422 FSISGSSGCKGV--PPTSNGKVNVH 444
+ + C G+ P SNG N H
Sbjct: 484 LGVPVARNCSGLQSPKLSNGTSNSH 508
>gi|432100061|gb|ELK28954.1| Ubiquitin carboxyl-terminal hydrolase 42 [Myotis davidii]
Length = 1175
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 196/328 (59%), Gaps = 27/328 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL KL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKL 220
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R +++V +IFGG L+S+VKCL C S+ D +DI+L+I
Sbjct: 221 DRH--------------TQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GG
Sbjct: 267 AQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG 326
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 327 KIAKDVKYPEYLDIRPYMSQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQ 385
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 386 MNDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|410984363|ref|XP_003998498.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Felis catus]
Length = 1304
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 196/328 (59%), Gaps = 27/328 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL KL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKL 220
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R +++V +IFGG L+S+VKCL C S+ D +DI+L+I
Sbjct: 221 DRH--------------TQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GG
Sbjct: 267 AQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG 326
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 327 KIAKDVKYPEYLDIRPYMSQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQ 385
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 386 MNDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|443717815|gb|ELU08703.1| hypothetical protein CAPTEDRAFT_136598 [Capitella teleta]
Length = 442
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 136/327 (41%), Positives = 194/327 (59%), Gaps = 26/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNSVLQCLTYTPPL N+ +H+ CKQ+ C C L+
Sbjct: 127 GLTNLGNTCFLNSVLQCLTYTPPLVNYLSSSEHAHTCKQVGF-----------CMVCELQ 175
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R P I +++ A+H GRQEDAHEFLRYVIDA +CL
Sbjct: 176 RHFRRCYENGGQAIKPHAILQKIKLIAKHMHWGRQEDAHEFLRYVIDAMQKSCL------ 229
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + I+ ++V+ +IFGG L+SQV CL C A+SN D +DIS+D+ N
Sbjct: 230 -------NGNTKLDRISKETTVINQIFGGFLRSQVVCLKCKAKSNTYDPFLDISVDVKNV 282
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
++++A +KF QPE LD +N Y C CK+ V+A+K+ +I + N+L IQLKR+ G+ GGK
Sbjct: 283 PNIQKAFEKFVQPEQLDLDNAYNCTKCKQKVAAQKRFTIHKPSNVLTIQLKRY-GVMGGK 341
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ + I+F E L + +M SQ Y+L+ +VH G S +SGHYY Y++ + WYC
Sbjct: 342 VTRHISFPEKLNIRPYM-SVSQGAAITYQLYAVLVHMGHSTNSGHYYCYVRSSNQAWYCM 400
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS V ++ VL+ + Y+LF+IR +
Sbjct: 401 NDSMVQQTSQGRVLNSEAYMLFYIRCD 427
>gi|426255424|ref|XP_004021348.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 42 [Ovis aries]
Length = 1264
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 195/327 (59%), Gaps = 25/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 159
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL
Sbjct: 160 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL------ 213
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + +++V +IFGG L+S+VKCL C S+ D +DI+L+I +
Sbjct: 214 -------NGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAA 266
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GGK
Sbjct: 267 QSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGK 326
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 327 IAKDVKYPEYLDIRPYMSQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQM 385
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 386 NDSIVSTSDIRSVLSQQAYVLFYIRSH 412
>gi|47219080|emb|CAG00219.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1113
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/343 (38%), Positives = 198/343 (57%), Gaps = 27/343 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS +QCLTYTPPLAN+ L +HS C Q S C C+++
Sbjct: 124 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRTCHQ----SGF-------CMICVMQ 172
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I+++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 173 NHIIQAFANTGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLSGYPKL 232
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +DI+++I
Sbjct: 233 DRQ--------------TQATTLVHQIFGGYLRSRVKCSICKSVSDTYDPYLDIAVEIRQ 278
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F +P+VL G N Y C CKK V A K+ ++ ++ N+L + LKRF GG
Sbjct: 279 AANIVRALELFVKPDVLSGENAYMCAKCKKKVPATKRFTVHRTSNVLTVSLKRFANFSGG 338
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M ++S +P Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 339 KITKDVGYPEFLNIRPYMSQSSGEPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 397
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGV 369
NDS V S ++ VL+++ Y+LF++R + +A+G GV
Sbjct: 398 MNDSLVHSSNIKVVLNQQAYVLFYLRIPETKKNADGQATKQGV 440
>gi|37722101|gb|AAR01977.1| DUB1 [Mus musculus]
Length = 729
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 196/328 (59%), Gaps = 27/328 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTC-----------HAEGFCMMCTMQ 159
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL KL
Sbjct: 160 THITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKL 219
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R +++V +IFGG L+S+VKCL C S+ D +DI+L+I
Sbjct: 220 DRH--------------TQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 265
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L I LKRF GG
Sbjct: 266 AQSVTKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFTGG 325
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 326 KIAKDVKYPEYLDIRPYMSQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQ 384
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VL+++ Y+LF+IR++
Sbjct: 385 MNDSIVSTSDIRAVLNQQAYVLFYIRSH 412
>gi|351704980|gb|EHB07899.1| Ubiquitin carboxyl-terminal hydrolase 42, partial [Heterocephalus
glaber]
Length = 1272
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/349 (39%), Positives = 202/349 (57%), Gaps = 33/349 (9%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
++ + WQ K +R G GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C
Sbjct: 81 KIYLKWQ------KTQRVG--AGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSRTC- 131
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
K C C ++ I ++LS + P I + + A HF G QEDA
Sbjct: 132 ----------HVKGFCMMCTMQAHITQALSHPGDVLKPMSIINEMEDVATHFHFGSQEDA 181
Query: 126 HEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
HEFL+Y++D CL G + +++V +IFGG L+S+VKCL
Sbjct: 182 HEFLQYIVDGMQKACL-------------NGSNKLDRHTQATTLVCQIFGGYLRSRVKCL 228
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
C S+ + +DI+L+I S S+ +A+++F +PE LDG N YKC CKK+V A K+ +
Sbjct: 229 NCKGVSDTFEPFLDITLEIKASPSVNKALEQFVKPEQLDGENAYKCSKCKKMVPASKRFT 288
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
I +S N+L + LKRF GGKI K + + E L + +M + + +P Y L+ +VH+G
Sbjct: 289 IHRSSNVLTLSLKRFANTTGGKIAKDVKYPEYLDIRPYMSQQNGEPI-IYVLYAVLVHAG 347
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRAN 354
F+ SGHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 348 FNCHSGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSH 396
>gi|390459112|ref|XP_002744123.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Callithrix
jacchus]
Length = 1319
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/328 (40%), Positives = 195/328 (59%), Gaps = 27/328 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL KL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKL 220
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R +++V +IFGG L+S+VKCL C S+ D +DI+L+I
Sbjct: 221 DRH--------------TQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GG
Sbjct: 267 AQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG 326
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK G WY
Sbjct: 327 KIAKDVKYPEYLDIRPYMSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKAINGLWYQ 385
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+I+++
Sbjct: 386 MNDSIVSTSDIRSVLSQQAYVLFYIKSH 413
>gi|351698096|gb|EHB01015.1| Ubiquitin carboxyl-terminal hydrolase 36 [Heterocephalus glaber]
Length = 1107
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/385 (37%), Positives = 209/385 (54%), Gaps = 39/385 (10%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +HS C Q + C C+++
Sbjct: 125 GLHNLGNTCFLNATVQCLTYTPPLANYLLSREHSRSCHQGSF-----------CMLCVMQ 173
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 174 NHIVQAFANSGNAIKPISFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGYAKL 233
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 234 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQ 279
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F +P+VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 280 AANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 339
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M +++ DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 340 KITKDVGYPEFLNIRPYMSQSNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 398
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNG--VKSH------ENGKEA 378
NDS V S ++ VL+++ Y+LF++R S G + G + SH K A
Sbjct: 399 MNDSLVHSSNVKVVLNQQAYVLFYLRIPSSKKSPEGPISRGGSTLPSHPSMIPDHTKKNA 458
Query: 379 YKGVKGTVPLKAVATKPSAEQSSRK 403
GV + P A KP RK
Sbjct: 459 GNGVTSSPP----AAKPQGAVPMRK 479
>gi|344289865|ref|XP_003416661.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Loxodonta
africana]
Length = 1431
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/327 (39%), Positives = 195/327 (59%), Gaps = 25/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 160
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I ++LS + P + + +R A HF+ G QEDAHEFL++ +DA CL
Sbjct: 161 AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQHTVDAMQKACL------ 214
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + +++V +IFGG L+S+VKCL C S+ D +DI+L+I +
Sbjct: 215 -------NGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAA 267
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GGK
Sbjct: 268 QSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGK 327
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 328 IAKDVKYPEYLDIRPYMSQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQM 386
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 387 NDSIVSTSDIRSVLSQQAYVLFYIRSH 413
>gi|291415162|ref|XP_002723823.1| PREDICTED: ubiquitin specific peptidase 36 [Oryctolagus cuniculus]
Length = 1054
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 140/365 (38%), Positives = 205/365 (56%), Gaps = 41/365 (11%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQ 66
L +SW E+ R G GL NLGN+C+LNS +QCLTYTPPLAN+ L +H+ C Q
Sbjct: 110 LSLSW------ERVFRVG--AGLHNLGNTCFLNSTVQCLTYTPPLANYLLSQEHARNCHQ 161
Query: 67 LTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAH 126
C C+++ I+++ + P LR A HF+ G QEDAH
Sbjct: 162 -----------GGFCMLCVMQNHIIQAFANSGNAIKPVSFIRDLRKIARHFRFGNQEDAH 210
Query: 127 EFLRYVIDACHNTCLR-LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
EFLRY IDA CL KL R+ +++V +IFGG L+S+VKC
Sbjct: 211 EFLRYTIDAMQKACLNGCAKLDRQ--------------TQATTLVHQIFGGYLRSRVKCS 256
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
C + S+ D +DI+L+I + ++ A++ F +P+VL G N Y C CKK V A K+ S
Sbjct: 257 LCKSVSDTYDPYLDIALEIRQAANIVRALELFVKPDVLSGENAYLCAKCKKKVPASKRFS 316
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
I ++ N+L + LKRF GGKI K + + E L + +M ++S +P Y L+ +VHSG
Sbjct: 317 IHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGEPV-TYGLYAVLVHSG 375
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR------ANQRPVS 359
+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R + Q P+S
Sbjct: 376 YSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPQGPIS 435
Query: 360 ANGTF 364
+F
Sbjct: 436 RAASF 440
>gi|311266703|ref|XP_003131212.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Sus scrofa]
Length = 1140
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 128/326 (39%), Positives = 191/326 (58%), Gaps = 27/326 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 119 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSREHTRGCHQGS-----------FCMLCVMQ 167
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P LR A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 168 NHIVQAFANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGCAKL 227
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 228 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQ 273
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F +P+VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 274 AANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 333
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M +++ +P Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 334 KITKEVGYPEFLNIRPYMSQSNGEPV-LYGLYAVLVHSGYSCHAGHYYCYVKASSGQWYQ 392
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIR 352
NDS V S ++ VL+++ Y+LF++R
Sbjct: 393 MNDSLVHASNIKVVLNQQAYVLFYLR 418
>gi|348568306|ref|XP_003469939.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Cavia
porcellus]
Length = 1328
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 130/327 (39%), Positives = 195/327 (59%), Gaps = 25/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C + C C ++
Sbjct: 110 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHA-----------EGFCMMCTMQ 158
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I ++LS + P + + ++ A HF+ G QEDAHEFL+Y +DA CL
Sbjct: 159 AHITQALSNPGDVIKPMFVINEMQRIARHFRFGNQEDAHEFLQYTVDAMQKACL------ 212
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + +++V +IFGG L+S+VKCL C S+ D +DI+L+I +
Sbjct: 213 -------NGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAA 265
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GGK
Sbjct: 266 PSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANSTGGK 325
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 326 IAKDVKYPEYLDIRPYMSQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQM 384
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 385 NDSIVSTSDIRSVLSQQAYVLFYIRSH 411
>gi|354473286|ref|XP_003498867.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Cricetulus
griseus]
gi|344241778|gb|EGV97881.1| Ubiquitin carboxyl-terminal hydrolase 36 [Cricetulus griseus]
Length = 1104
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 129/326 (39%), Positives = 191/326 (58%), Gaps = 27/326 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
+V++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +DI+L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F +P+VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M ++S DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIR 352
NDS V S ++ VL+++ Y+LF++R
Sbjct: 397 MNDSLVHSSNVKVVLNQQAYVLFYLR 422
>gi|297487366|ref|XP_002696201.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Bos taurus]
gi|296476002|tpg|DAA18117.1| TPA: deubiquitinating enzyme 1-like [Bos taurus]
Length = 1101
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 128/326 (39%), Positives = 191/326 (58%), Gaps = 27/326 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHTRGCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I+++ + P LR A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIIQAFANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F +P+VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M ++S +P Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGEPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIR 352
NDS V S ++ VL+++ Y+LF++R
Sbjct: 397 MNDSLVHASNIKVVLNQQAYVLFYLR 422
>gi|440892473|gb|ELR45652.1| Ubiquitin carboxyl-terminal hydrolase 36 [Bos grunniens mutus]
Length = 1098
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 128/326 (39%), Positives = 191/326 (58%), Gaps = 27/326 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 121 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHTRGCHQGSF-----------CMLCVMQ 169
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I+++ + P LR A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 170 NHIIQAFANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGCAKL 229
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 230 DRQ--------------TQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQ 275
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F +P+VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 276 AANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 335
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M ++S +P Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 336 KITKDVGYPEFLNIRPYMSQSSGEPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 394
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIR 352
NDS V S ++ VL+++ Y+LF++R
Sbjct: 395 MNDSLVHASNIKVVLNQQAYVLFYLR 420
>gi|348558248|ref|XP_003464930.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Cavia
porcellus]
Length = 1102
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 192/326 (58%), Gaps = 27/326 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNATVQCLTYTPPLANYLLSREHARSCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIVQAFANSGNAIKPISFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F +P+VL G N Y C C+K V A K+ +I ++ N+L + LKRF + GG
Sbjct: 278 ATNIVRALELFVKPDVLSGENAYMCAKCRKKVPASKRFTIHRTSNVLTLSLKRFANLSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M +++ DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIR 352
NDS V S ++ VL+++ Y+LF++R
Sbjct: 397 MNDSLVHASNVKVVLNQQAYVLFYLR 422
>gi|426239211|ref|XP_004013519.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Ovis aries]
Length = 1080
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 127/326 (38%), Positives = 191/326 (58%), Gaps = 27/326 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHTRGCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I+++ + P LR A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIIQAFANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F +P+VL G N Y C CK+ V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKPDVLSGENAYMCAKCKRKVPASKRFTIHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M ++S +P Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGEPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIR 352
NDS V S ++ VL+++ Y+LF++R
Sbjct: 397 MNDSSVHASNIKVVLNQQAYVLFYLR 422
>gi|157820619|ref|NP_001100539.1| ubiquitin carboxyl-terminal hydrolase 36 [Rattus norvegicus]
gi|149054934|gb|EDM06751.1| ubiquitin specific protease 36 (predicted) [Rattus norvegicus]
Length = 1005
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 130/326 (39%), Positives = 190/326 (58%), Gaps = 27/326 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
+V++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +DI+L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCRSVSDTYDPYLDIALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ SI ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKSDVLSGENAYMCAKCKKKVPASKRFSIHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M ++S DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIR 352
NDS V S ++ VLS++ Y+LF++R
Sbjct: 397 MNDSLVHSSNVKVVLSQQAYVLFYLR 422
>gi|431908709|gb|ELK12301.1| Ubiquitin carboxyl-terminal hydrolase 36 [Pteropus alecto]
Length = 1007
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/326 (39%), Positives = 192/326 (58%), Gaps = 27/326 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS +QCLTYTPPLA + L +HS C+Q + C C+++
Sbjct: 123 GLHNLGNTCFLNSTVQCLTYTPPLAGYLLSKEHSRSCRQGS-----------FCMLCLMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLSGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCRSVSDTYDPYLDVALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F +P+VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M ++S +P Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGEPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIR 352
NDS V+ S ++ VL+++ Y+LF++R
Sbjct: 397 MNDSLVNSSNIKVVLNQQAYVLFYLR 422
>gi|327264744|ref|XP_003217171.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Anolis
carolinensis]
Length = 1114
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 133/348 (38%), Positives = 196/348 (56%), Gaps = 27/348 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS LQCLTYTPPLAN+ L +HS C Q C CI++
Sbjct: 121 GLHNLGNTCFLNSTLQCLTYTPPLANYLLSKEHSRSCHQGGF-----------CMMCIMQ 169
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
++++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 170 NHMIQAFANSGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYTKL 229
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 230 DRQ--------------TQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPFLDVALEIRQ 275
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L I LKRF GG
Sbjct: 276 AANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRASNVLTISLKRFANFSGG 335
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M ++S DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 336 KITKDVGYPEFLNIRPYMSQSSGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 394
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKSHEN 374
NDS V S ++ VL+++ Y+LF++R + G + + V + N
Sbjct: 395 MNDSLVHSSNIKVVLNQQAYVLFYLRIPSTRKNPEGPISKSSVSNRTN 442
>gi|427793029|gb|JAA61966.1| Putative ubiquitin carboxyl-terminal hydrolase, partial
[Rhipicephalus pulchellus]
Length = 1076
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 134/338 (39%), Positives = 200/338 (59%), Gaps = 28/338 (8%)
Query: 18 EKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAE 76
E+R+ G GL N+GN+C++N+V+QCLTY PPLAN+ L + H + CK L
Sbjct: 162 EQRRIGA---GLVNMGNTCFMNTVIQCLTYCPPLANYLLHQDDHCTKCKTLNF------- 211
Query: 77 RKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDAC 136
C C L++ + R+L P I L+ A+HF+ G+QEDAHEFLRYVID
Sbjct: 212 ----CMMCELQRHMKRALEKSGDSIKPVYIYQRLKAIAKHFQFGQQEDAHEFLRYVIDNL 267
Query: 137 HNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDE 196
L + GG + + ++VV EIFGG +SQV C+ C +SN D
Sbjct: 268 WKAAL----------ANYDGGVKLDPASKETTVVNEIFGGYHRSQVTCMKCKEKSNTYDH 317
Query: 197 IMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQ 256
MD+ LDI N+ SL+ A++KF +PE+L +N YKC C V A+K+ ++ ++PN+ Q
Sbjct: 318 FMDLILDIKNASSLETALEKFVEPELLQNDNAYKCPRCNIKVMAQKRFTVHRAPNVATFQ 377
Query: 257 LKRFEG--IFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYY 314
LKRF+ +FGGKI K +++ E L L +M DP Y+L +VH G S +SGHY+
Sbjct: 378 LKRFDANRMFGGKITKHVSYPEHLELRPYMSDKHGDPV-TYRLNAVLVHLGASCNSGHYF 436
Query: 315 AYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
Y++++ G WYC +DS V ++ +VL+++ Y+LF++R
Sbjct: 437 CYVRNSNGSWYCMDDSRVHQVSMGQVLNQQAYVLFYVR 474
>gi|449275065|gb|EMC84050.1| Ubiquitin carboxyl-terminal hydrolase 36, partial [Columba livia]
Length = 349
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 133/349 (38%), Positives = 197/349 (56%), Gaps = 33/349 (9%)
Query: 4 AHELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSL 63
A L M+WQ R G GL NLGN+C+LN+ LQCLTYTPPLAN+ L +HS
Sbjct: 34 AERLAMNWQ------HIYRVGA--GLLNLGNTCFLNATLQCLTYTPPLANYLLSKEHSRT 85
Query: 64 CKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQE 123
C Q C C+++ + ++ + P L+ A H + GRQE
Sbjct: 86 CHQ-----------SGFCMMCVMQNHVTQAFANSGNAIKPVSFVRNLKRIAPHIRFGRQE 134
Query: 124 DAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVK 183
DAHEFLR+ IDA CLR + ++++ +IFGG LQS+VK
Sbjct: 135 DAHEFLRFTIDAMQKACLR-------------DHARSDRQTQATTLIHQIFGGYLQSRVK 181
Query: 184 CLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C C S+ D +D++L+I + ++ A++ F +P++L G N Y C CKK VSA K+
Sbjct: 182 CSVCRGVSDTFDPCLDVALEITQAANIVRALELFVRPDLLGGANAYMCARCKKKVSATKR 241
Query: 244 MSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH 303
+I ++PN+L + LKRF G GGKI K + + E+L + +M + S DP Y L+ +VH
Sbjct: 242 FTIHRAPNVLTLALKRFAGFTGGKITKDVGYPELLNIRPYMSQTSGDPV-MYGLYAVLVH 300
Query: 304 SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
SG+S +GHYY Y+K + G+WY ND+ V S ++ VL+++ Y+LF++R
Sbjct: 301 SGYSSHAGHYYCYVKASNGQWYQMNDNVVRPSNVKVVLNQQAYVLFYVR 349
>gi|432118123|gb|ELK38013.1| Ubiquitin carboxyl-terminal hydrolase 36 [Myotis davidii]
Length = 889
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 127/326 (38%), Positives = 190/326 (58%), Gaps = 27/326 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 71 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSREHARSCPQGS-----------FCMLCVMQ 119
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
+V++ + P LR A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 120 NHLVQAFANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGYAKL 179
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 180 DRQ--------------TQATTLVHQIFGGCLRSRVKCSVCKSVSDTYDPYLDVALEIRQ 225
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F +P+ L G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 226 AANIVRALELFVKPDALSGENAYMCARCKKKVPASKRFTIHRASNVLTLSLKRFANFSGG 285
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M ++S +P Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 286 KITKDVGYPEFLNIRPYMSQSSGEPV-VYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 344
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIR 352
NDS V S ++ VL+++ Y+LF++R
Sbjct: 345 MNDSLVHSSNIKVVLNQQAYVLFYLR 370
>gi|395825848|ref|XP_003786132.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Otolemur
garnettii]
Length = 1120
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/326 (39%), Positives = 190/326 (58%), Gaps = 27/326 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 122 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSREHARSCHQGSF-----------CMLCVMQ 170
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 171 NHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKL 230
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +DI+L+I
Sbjct: 231 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQ 276
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F +P+VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 277 AANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 336
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + S +P Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 337 KITKDVGYPEFLNIRPYMSQNSGEPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 395
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIR 352
+DS V S+ + VLS++ Y+LF++R
Sbjct: 396 MDDSLVHPSSGKAVLSQQAYVLFYLR 421
>gi|345804557|ref|XP_540463.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Canis lupus
familiaris]
Length = 1116
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 196/339 (57%), Gaps = 27/339 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHTRNCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
+V++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F +P+VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M +++ +P Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSNGEPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFA 365
NDS V S ++ VL+++ Y+LF++R S +G+ +
Sbjct: 397 MNDSLVHSSNIKVVLNQQAYLLFYLRIPSSKRSPDGSLS 435
>gi|301766030|ref|XP_002918424.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like
[Ailuropoda melanoleuca]
Length = 1116
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 196/339 (57%), Gaps = 27/339 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHTRNCHQGS-----------FCMLCLMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
+V++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F +P+VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRASNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M +++ +P Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSNGEPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFA 365
NDS V S ++ VL+++ Y+LF++R S +G+ +
Sbjct: 397 MNDSLVHSSNIKVVLNQQAYVLFYLRIPGSKKSPDGSLS 435
>gi|281342803|gb|EFB18387.1| hypothetical protein PANDA_006891 [Ailuropoda melanoleuca]
Length = 1117
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 196/339 (57%), Gaps = 27/339 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHTRNCHQGS-----------FCMLCLMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
+V++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F +P+VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRASNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M +++ +P Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSNGEPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFA 365
NDS V S ++ VL+++ Y+LF++R S +G+ +
Sbjct: 397 MNDSLVHSSNIKVVLNQQAYVLFYLRIPGSKKSPDGSLS 435
>gi|149723495|ref|XP_001491180.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Equus
caballus]
Length = 1122
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 127/326 (38%), Positives = 190/326 (58%), Gaps = 27/326 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS +QCLTYTPPLAN+ L +H+ C Q C C+++
Sbjct: 123 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSREHARSCHQ-----------GGFCMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F +P+VL G N Y C CKK V A K+ +I ++ ++L + LKRF GG
Sbjct: 278 AANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRTSSVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M ++S +P Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGEPV-VYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIR 352
NDS V S ++ VL+++ Y+LF++R
Sbjct: 397 MNDSLVHSSNIKVVLNQQAYVLFYLR 422
>gi|344291363|ref|XP_003417405.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Loxodonta
africana]
Length = 1132
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 133/342 (38%), Positives = 198/342 (57%), Gaps = 29/342 (8%)
Query: 12 QPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDS 71
Q SL E+ R G GL NLGN+C+LNS +QCLTYTPPLAN+ L +H+ C Q
Sbjct: 109 QLSLKWERVYRVG--AGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHARSCHQ----- 161
Query: 72 ALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRY 131
C C+++ I+++ + P L+ A HF+ G QEDAHEFLRY
Sbjct: 162 ------GGFCMLCVMQNHIIQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRY 215
Query: 132 VIDACHNTCLR-LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAE 190
IDA CL KL R+ +++V +IFGG L+S+VKC C +
Sbjct: 216 TIDAMQKACLNGYAKLDRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSV 261
Query: 191 SNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSP 250
S+ D +DI+L+I + ++ A++ F +P+VL G N Y C CKK V A K+ SI ++
Sbjct: 262 SDTYDPYLDIALEIRQAANIVRALEVFVKPDVLSGENAYMCAKCKKKVPASKRFSIHRAS 321
Query: 251 NILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS 310
++L + LKRF GGKI K + + E L + +M +++ +P Y L+ +VHSG+S +
Sbjct: 322 SVLTLSLKRFANFTGGKITKDVGYPEFLNIRPYMSQSNGEPV-MYGLYAVLVHSGYSCHA 380
Query: 311 GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
GHYY Y+K + G+WY NDS V +S ++ VL+++ Y+LF++R
Sbjct: 381 GHYYCYVKVSNGQWYQMNDSLVHLSNIKVVLNQQAYVLFYLR 422
>gi|395533332|ref|XP_003768714.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Sarcophilus
harrisii]
Length = 1142
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 131/340 (38%), Positives = 197/340 (57%), Gaps = 29/340 (8%)
Query: 14 SLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSAL 73
SL E+ R G GL NLGN+C+LNS +QCLTYTPPLAN+ L +H+ C Q
Sbjct: 111 SLKWERIYRVG--AGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHTRNCHQGGF---- 164
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
C C+++ ++++ + P L+ A HF+ G QEDAHEFLRY+I
Sbjct: 165 -------CMLCVMQNHMIQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYII 217
Query: 134 DACHNTCLR-LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESN 192
DA CL KL R+ +++V +IFGG L+S+VKC C + S+
Sbjct: 218 DAMQKACLNGYTKLDRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSD 263
Query: 193 KVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNI 252
D +D++L+I + ++ A++ F +P+VL G N Y C CKK V A K+ +I ++ N+
Sbjct: 264 TYDPYLDVALEIRQAANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNV 323
Query: 253 LVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGH 312
L + LKRF GGKI K + + E L + +M +++ DP Y L+ +VHSG+S +GH
Sbjct: 324 LTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSNGDPI-MYGLYAVLVHSGYSCHAGH 382
Query: 313 YYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
YY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 383 YYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVLFYLR 422
>gi|363739509|ref|XP_414742.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Gallus gallus]
Length = 1323
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 132/326 (40%), Positives = 191/326 (58%), Gaps = 25/326 (7%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCIL 86
+GL NLGN+C++NS LQCLTYTPPLAN+ L L+H+ C + C C +
Sbjct: 106 VGLFNLGNTCFINSALQCLTYTPPLANYMLSLEHTQSCNY-----------QGFCMMCTM 154
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
E I R L PA + L+ +HF+ G QEDAHEFLR+ +DA CL
Sbjct: 155 ETHINRVLCCAHDAIKPAFVVHELKRIGKHFRFGAQEDAHEFLRFTVDAMQQACLH---- 210
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
G + + ++++ +IFGG L+S+VKCL C A S+ + +DI LDI
Sbjct: 211 ---------GCTILDRSSQATTIIHQIFGGFLRSRVKCLNCKAVSDTYEAFLDIPLDIKT 261
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L I LKRF GG
Sbjct: 262 VSSVTKALEQFVKPEQLDGENCYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFTGG 321
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI+K + + E L L ++M ++ +P Y L+ +VHSG + +GHY+ +IK A G WY
Sbjct: 322 KINKEVKYPEYLDLRAYMSQSIGEPLI-YALYAVLVHSGVNSHAGHYFCFIKAADGLWYQ 380
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIR 352
ND+ V S ++ VL ++ Y+LF+IR
Sbjct: 381 MNDASVVQSNIKTVLGQQAYLLFYIR 406
>gi|340368667|ref|XP_003382872.1| PREDICTED: hypothetical protein LOC100636480 [Amphimedon
queenslandica]
Length = 1097
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 140/351 (39%), Positives = 202/351 (57%), Gaps = 34/351 (9%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQ 66
L M+W +E R G GL N+GN+C+LNSVLQCL+YTPPL N+ L H + C
Sbjct: 111 LLMNW-----TESRPIGS---GLSNMGNTCFLNSVLQCLSYTPPLVNYILSGHHKNKCTH 162
Query: 67 LTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAH 126
C C +VR + + P I LR+FA+HF+ G QEDAH
Sbjct: 163 QGF-----------CAMCEYHSHLVR-VRKSTGVVKPIPIVHNLRVFAKHFRNGHQEDAH 210
Query: 127 EFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLA 186
EFLRY ID+ L+++ G S + + ++V+ +IFGG +SQVKCL
Sbjct: 211 EFLRYFIDS-------LQRISLIGHQPSKL----DVFSKHTTVIHQIFGGYHRSQVKCLK 259
Query: 187 CGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSI 246
C SN D ++DISLDI SL++A+ +P++LD NKY C CK+L A+KQ+++
Sbjct: 260 CKRFSNTYDPLLDISLDIKGCPSLQKALFSSIKPDLLDEENKYACPFCKELTRAKKQLTV 319
Query: 247 LQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHS 304
P +L IQLKRFE +FGGKI+K + + E L + FM + P Y+L+ +VH
Sbjct: 320 HVLPKVLTIQLKRFEFNTMFGGKINKTVQYPEHLDMRPFMSDK-EGPHEWYRLYAVLVHY 378
Query: 305 GFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQ 355
G+S SGHYY Y++++ G WY NDS V+ + VLS++ Y+LF+I+ ++
Sbjct: 379 GYSCHSGHYYCYVRNSNGVWYSMNDSMVNQVSKATVLSQQAYLLFYIKDSE 429
>gi|148702708|gb|EDL34655.1| mCG13907, isoform CRA_b [Mus musculus]
Length = 1037
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 128/326 (39%), Positives = 189/326 (57%), Gaps = 27/326 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS +QCLTYTPPLAN+ L +H+ C Q C C+++
Sbjct: 105 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQ-----------GGFCMLCLMQ 153
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
+V++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 154 NHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKL 213
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +DI+L+I
Sbjct: 214 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQ 259
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 260 AANIVRALELFVKSDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 319
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M ++S DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 320 KITKDVGYPEFLNIRPYMSQSSGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 378
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIR 352
NDS V S ++ VL+++ Y+LF++R
Sbjct: 379 MNDSLVHSSNVKVVLNQQAYVLFYLR 404
>gi|37360390|dbj|BAC98173.1| mKIAA1453 protein [Mus musculus]
Length = 974
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/326 (39%), Positives = 189/326 (57%), Gaps = 27/326 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS +QCLTYTPPLAN+ L +H+ C Q C C+++
Sbjct: 160 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQ-----------GGFCMLCLMQ 208
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
+V++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 209 NHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKL 268
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +DI+L+I
Sbjct: 269 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQ 314
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 315 AANIVRALELFVKSDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 374
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M ++S DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 375 KITKDVGYPEFLNIRPYMSQSSGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 433
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIR 352
NDS V S ++ VL+++ Y+LF++R
Sbjct: 434 MNDSLVHSSNVKVVLNQQAYVLFYLR 459
>gi|334323020|ref|XP_001371102.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Monodelphis
domestica]
Length = 1133
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/340 (38%), Positives = 197/340 (57%), Gaps = 29/340 (8%)
Query: 14 SLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSAL 73
SL E+ R G GL NLGN+C+LNS +QCLTYTPPLAN+ L +H+ C Q
Sbjct: 111 SLKWERIYRVG--AGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHTRNCHQ------- 161
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
C C+++ ++++ + P L+ A HF+ G QEDAHEFLRY+I
Sbjct: 162 ----GGFCMLCVMQNHMIQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYII 217
Query: 134 DACHNTCLR-LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESN 192
DA CL KL R+ +++V +IFGG L+S+VKC C + S+
Sbjct: 218 DAMQKACLNGYTKLDRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSD 263
Query: 193 KVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNI 252
D +D++L+I + ++ A++ F +P+VL G N Y C CKK V A K+ +I ++ N+
Sbjct: 264 TYDPYLDVALEIRQAANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNV 323
Query: 253 LVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGH 312
L + LKRF GGKI K + + E L + +M +++ DP Y L+ +VHSG+S +GH
Sbjct: 324 LTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSNGDPV-MYGLYAVLVHSGYSCHAGH 382
Query: 313 YYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
YY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 383 YYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVLFYLR 422
>gi|148702709|gb|EDL34656.1| mCG13907, isoform CRA_c [Mus musculus]
Length = 1092
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/326 (39%), Positives = 189/326 (57%), Gaps = 27/326 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS +QCLTYTPPLAN+ L +H+ C Q C C+++
Sbjct: 160 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQ-----------GGFCMLCLMQ 208
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
+V++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 209 NHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKL 268
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +DI+L+I
Sbjct: 269 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQ 314
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 315 AANIVRALELFVKSDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 374
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M ++S DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 375 KITKDVGYPEFLNIRPYMSQSSGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 433
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIR 352
NDS V S ++ VL+++ Y+LF++R
Sbjct: 434 MNDSLVHSSNVKVVLNQQAYVLFYLR 459
>gi|226442882|ref|NP_001028700.1| ubiquitin carboxyl-terminal hydrolase 36 [Mus musculus]
gi|251765139|sp|B1AQJ2.1|UBP36_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Ubiquitin
thioesterase 36; AltName:
Full=Ubiquitin-specific-processing protease 36
Length = 1098
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/326 (39%), Positives = 189/326 (57%), Gaps = 27/326 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS +QCLTYTPPLAN+ L +H+ C Q C C+++
Sbjct: 123 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQ-----------GGFCMLCLMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
+V++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +DI+L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKSDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M ++S DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIR 352
NDS V S ++ VL+++ Y+LF++R
Sbjct: 397 MNDSLVHSSNVKVVLNQQAYVLFYLR 422
>gi|345319072|ref|XP_001520693.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36
[Ornithorhynchus anatinus]
Length = 989
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 193/339 (56%), Gaps = 27/339 (7%)
Query: 14 SLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSAL 73
SL E+ R G GL NLGN+C+LNS +QCLTYTPPLAN+ L +HS C
Sbjct: 113 SLRWERVYRVG--AGLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHSRSCAPGGF---- 166
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
C C+++ ++++ + P L+ A HF+ G QEDAHEFLRY I
Sbjct: 167 -------CMLCVMQNHMIQTFANSGNAIKPFSFIRDLKKIARHFRFGSQEDAHEFLRYTI 219
Query: 134 DACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNK 193
DA CL G + +++V +IFGG L+S+VKC C + S+
Sbjct: 220 DAMQKACL-------------NGHAKLDRQTQATTLVHQIFGGYLRSRVKCSLCKSVSDT 266
Query: 194 VDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
D +D++L+I + ++ A++ F +P+VL G N Y C CKK V A K+ SI ++ N+L
Sbjct: 267 YDPYLDVALEIRQTANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFSIHRASNVL 326
Query: 254 VIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHY 313
+ LKRF GGKI K + + E L + +M ++S DP Y L+ +VHSG+S +GHY
Sbjct: 327 TLSLKRFANFCGGKITKDVGYPEFLNIRPYMSQSSGDPV-MYGLYAVLVHSGYSCHAGHY 385
Query: 314 YAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
Y Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 386 YCYVKASNGQWYQMNDSSVHSSNIKVVLNQQAYVLFYLR 424
>gi|449476389|ref|XP_002192172.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42, partial
[Taeniopygia guttata]
Length = 1282
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/326 (39%), Positives = 193/326 (59%), Gaps = 25/326 (7%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCIL 86
+GL+NLGN+C+LNS LQCLTYTPPLAN+ L L+H+ C + G C C +
Sbjct: 107 VGLQNLGNTCFLNSTLQCLTYTPPLANYMLSLEHTKSC-HVEG----------FCMMCTM 155
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
E I + L P + + L+ +HF G QEDAHEFL + +DA CL
Sbjct: 156 ESHINQVLCCSNNAIKPTSVINGLKRIGKHFHFGSQEDAHEFLCFTVDALQKACL----- 210
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
G + + ++++ +IFGG L+S+VKCL C A S+ + +D++LDI
Sbjct: 211 --------NGSTKLDRSSQATTLIYQIFGGYLRSRVKCLNCKAVSDTYEPFLDVTLDIKA 262
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
S+ A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L I LKRF GG
Sbjct: 263 VTSVTRALEQFVKPEQLDGENSYKCSKCKKMVPASKRYTIHRSSNVLTISLKRFANFTGG 322
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI+K + + E L L ++M ++ +P Y L+ +VHSGF+ ++GHY +IK G WY
Sbjct: 323 KINKDVKYPEYLDLRAYMSQSIGEPLI-YALYAVLVHSGFNCNAGHYLCFIKAGNGLWYR 381
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIR 352
ND+ V +S ++ VL+++ Y+LF+IR
Sbjct: 382 MNDASVELSDIKTVLNQQAYVLFYIR 407
>gi|148702707|gb|EDL34654.1| mCG13907, isoform CRA_a [Mus musculus]
Length = 1008
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/326 (39%), Positives = 189/326 (57%), Gaps = 27/326 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS +QCLTYTPPLAN+ L +H+ C Q C C+++
Sbjct: 123 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHARSCHQ-----------GGFCMLCLMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
+V++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +DI+L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKSDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M ++S DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQSSGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIR 352
NDS V S ++ VL+++ Y+LF++R
Sbjct: 397 MNDSLVHSSNVKVVLNQQAYVLFYLR 422
>gi|198414888|ref|XP_002127053.1| PREDICTED: similar to ubiquitin specific protease 36 [Ciona
intestinalis]
Length = 768
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/350 (40%), Positives = 197/350 (56%), Gaps = 33/350 (9%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
+L++ W RK G GL NLGN+C+LNS LQCLTYTPPLAN+ + QH + C+
Sbjct: 94 KLELLW--------RKSGRVGAGLVNLGNTCFLNSALQCLTYTPPLANYLMSNQHRAQCR 145
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
+ G + C C L+ S P I LRI A+H + GRQEDA
Sbjct: 146 -VNG---------QFCMLCSLQHHQSASFGNGGKSIRPMNILKNLRIIAKHLQFGRQEDA 195
Query: 126 HEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
HEF+RY +DA +CL G + +++V +IFGG L+S+VKC
Sbjct: 196 HEFIRYSVDAMQRSCL------------FGLPSKLDIHTKTTTLVYQIFGGYLRSRVKCR 243
Query: 186 ACGAESNKVDEIMDISLDI--LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C A S+ D +D+SLDI S L++ ++ F +PE+L G+N YKC CKK V A K
Sbjct: 244 QCRAVSDTFDPFLDLSLDINKQESNDLRKCLENFVKPELLHGDNLYKCYQCKKSVPASKT 303
Query: 244 MSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH 303
SI + PN+L +QLKRF G KI++ I + L L + + ++ P Y L+ +VH
Sbjct: 304 FSIHRPPNVLTVQLKRFSSFMGNKINRDITYPSKLNLGPYTS-SDRNEGPIYDLYAVLVH 362
Query: 304 SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 353
SGFS +SGHYYAY K A G+WYC NDS V+ + + L+++ Y+LF+ R
Sbjct: 363 SGFSCNSGHYYAYAKAANGQWYCFNDSSVNQVSSHQALNQQAYLLFYHRV 412
>gi|116284123|gb|AAH16487.1| USP36 protein [Homo sapiens]
Length = 963
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/345 (37%), Positives = 194/345 (56%), Gaps = 27/345 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +DI+L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
NDS V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 397 MNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSS 441
>gi|410052277|ref|XP_001146571.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Pan
troglodytes]
Length = 1037
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 194/345 (56%), Gaps = 27/345 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
NDS V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 397 MNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSS 441
>gi|66820851|ref|XP_643982.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
gi|60472353|gb|EAL70306.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
Length = 919
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/329 (42%), Positives = 195/329 (59%), Gaps = 26/329 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N+GN+C++NSVLQCLTYT PLANF + +HS C Q +G C FC LE
Sbjct: 235 GLNNVGNTCFMNSVLQCLTYTVPLANFMMSREHSRQC-QASG----------FCIFCSLE 283
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
++++S P +I S +R A F+ GRQED+HEF+R++I++ L
Sbjct: 284 TQVLQSHKCGGKSITPKEIASNIRKIAPTFRIGRQEDSHEFIRFMIESLQKVSL------ 337
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S G + ++V+ IFGG L+SQVKC C ESN D MD+ +DI +
Sbjct: 338 -----SKYPKGSINHRDAMTTVIGSIFGGYLRSQVKCSQCQYESNTYDPFMDLCVDINQA 392
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFG 265
SL + + F + E+LDG+NKYKC CKKLV A+K++ I +P IL Q+KRF G +G
Sbjct: 393 DSLTKGLTNFVKSELLDGSNKYKCSKCKKLVKAQKRLQIHIAPPILTCQIKRFSFLGSYG 452
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
GKI++ I F++ L LS FM +++ Y L+ +VH G S SGHYY Y+K + G WY
Sbjct: 453 GKINRQIQFDQSLNLSPFMTQSNN--HSIYDLYAVLVHLGGSTSSGHYYCYVKGSNGIWY 510
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIRAN 354
+DS VS +L VLS+K Y+LF+ + N
Sbjct: 511 NMDDSSVSQVSLNTVLSQKAYMLFYSKRN 539
>gi|328868712|gb|EGG17090.1| peptidase C19 family protein [Dictyostelium fasciculatum]
Length = 857
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/348 (43%), Positives = 204/348 (58%), Gaps = 30/348 (8%)
Query: 13 PSLLSEK-RKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDS 71
PSL+ K K+ GP GL NLGN+C++N+VLQCLTYTPPL N+ + +H+ CK
Sbjct: 273 PSLMEWKGVKKIGP--GLENLGNTCFMNAVLQCLTYTPPLYNYMVSHEHTKTCK------ 324
Query: 72 ALDAERKRECPFCILEKRIVRSLSVDLTLDA--PAKIQSCLRIFAEHFKCGRQEDAHEFL 129
+ C FC LE+ IVRS A P +I L+ FA F+ GRQED+HEF+
Sbjct: 325 -----TQGFCIFCSLERHIVRSHEPSGVGRAITPKEIAINLKKFAPGFRLGRQEDSHEFI 379
Query: 130 RYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGA 189
R++++ C CL S G + ++V+ IFGG LQSQVKC C
Sbjct: 380 RFILEGCQKVCL-----------SKYAKGSVTPRDSMTTVIGSIFGGYLQSQVKCTQCSY 428
Query: 190 ESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQS 249
ESN D MD+S+DI S S+ +AMQ+F + E LDG NKYKC CKKLV A K+M++ +
Sbjct: 429 ESNTFDPFMDLSVDIHTSDSITKAMQQFVKAEYLDGANKYKCCKCKKLVRASKRMTVHVA 488
Query: 250 PNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPD 309
P+IL IQLKRF G K ++ I +E L LS +M +++D Y L+G +VHSG S +
Sbjct: 489 PSILTIQLKRF-NYNGSKSNRQIQYESTLDLSPYMSNSTKD--AVYDLYGVLVHSGGSTN 545
Query: 310 SGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
SGHYY Y+K + W+ ND++VS L ++ YILF+ R P
Sbjct: 546 SGHYYCYVKGSTNLWHNMNDNFVSSVNQPTALGQRAYILFYSRRVNSP 593
>gi|7023072|dbj|BAA91825.1| unnamed protein product [Homo sapiens]
Length = 954
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 194/345 (56%), Gaps = 27/345 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
NDS V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 397 MNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSS 441
>gi|116283676|gb|AAH27992.1| USP36 protein [Homo sapiens]
Length = 959
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 194/345 (56%), Gaps = 27/345 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
NDS V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 397 MNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSS 441
>gi|426346503|ref|XP_004040916.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Gorilla
gorilla gorilla]
Length = 1123
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 194/345 (56%), Gaps = 27/345 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
NDS V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 397 MNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSS 441
>gi|122114651|ref|NP_079366.3| ubiquitin carboxyl-terminal hydrolase 36 [Homo sapiens]
gi|119609940|gb|EAW89534.1| ubiquitin specific peptidase 36, isoform CRA_b [Homo sapiens]
gi|119609941|gb|EAW89535.1| ubiquitin specific peptidase 36, isoform CRA_b [Homo sapiens]
gi|119609942|gb|EAW89536.1| ubiquitin specific peptidase 36, isoform CRA_b [Homo sapiens]
Length = 1123
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 194/345 (56%), Gaps = 27/345 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
NDS V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 397 MNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSS 441
>gi|410222778|gb|JAA08608.1| ubiquitin specific peptidase 36 [Pan troglodytes]
gi|410266542|gb|JAA21237.1| ubiquitin specific peptidase 36 [Pan troglodytes]
gi|410297248|gb|JAA27224.1| ubiquitin specific peptidase 36 [Pan troglodytes]
gi|410340693|gb|JAA39293.1| ubiquitin specific peptidase 36 [Pan troglodytes]
Length = 1123
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 194/345 (56%), Gaps = 27/345 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
NDS V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 397 MNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSS 441
>gi|47940448|gb|AAH71582.1| USP36 protein [Homo sapiens]
Length = 1123
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 194/345 (56%), Gaps = 27/345 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
NDS V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 397 MNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSS 441
>gi|380790487|gb|AFE67119.1| ubiquitin carboxyl-terminal hydrolase 36 [Macaca mulatta]
gi|383411117|gb|AFH28772.1| ubiquitin carboxyl-terminal hydrolase 36 [Macaca mulatta]
Length = 1123
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 194/345 (56%), Gaps = 27/345 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
NDS V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 397 MNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSS 441
>gi|124056592|sp|Q9P275.3|UBP36_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Ubiquitin
thioesterase 36; AltName:
Full=Ubiquitin-specific-processing protease 36
Length = 1121
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 194/345 (56%), Gaps = 27/345 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
NDS V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 397 MNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSS 441
>gi|384941532|gb|AFI34371.1| ubiquitin carboxyl-terminal hydrolase 36 [Macaca mulatta]
Length = 1123
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 194/345 (56%), Gaps = 27/345 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
NDS V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 397 MNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSS 441
>gi|397494913|ref|XP_003818312.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Pan paniscus]
Length = 1122
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 194/345 (56%), Gaps = 27/345 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
NDS V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 397 MNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSS 441
>gi|168270556|dbj|BAG10071.1| ubiquitin carboxyl-terminal hydrolase 36 [synthetic construct]
Length = 1121
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 194/345 (56%), Gaps = 27/345 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
NDS V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 397 MNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSS 441
>gi|7959165|dbj|BAA95977.1| KIAA1453 protein [Homo sapiens]
Length = 1123
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 194/345 (56%), Gaps = 27/345 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 125 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 173
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 174 NHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 233
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 234 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQ 279
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 280 AANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 339
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 340 KITKDVGYPEFLNIRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 398
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
NDS V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 399 MNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSS 443
>gi|402901257|ref|XP_003913570.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Papio anubis]
Length = 1123
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 194/345 (56%), Gaps = 27/345 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
NDS V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 397 MNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSS 441
>gi|119609939|gb|EAW89533.1| ubiquitin specific peptidase 36, isoform CRA_a [Homo sapiens]
Length = 1075
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 194/345 (56%), Gaps = 27/345 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
NDS V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 397 MNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSS 441
>gi|297701928|ref|XP_002827948.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Pongo abelii]
Length = 1124
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 194/345 (56%), Gaps = 27/345 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 124 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 172
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 173 NHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 232
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 233 DRQ--------------TQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQ 278
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 279 AANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 338
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 339 KITKDVGYPEFLNIRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 397
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
NDS V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 398 MNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSS 442
>gi|390463858|ref|XP_003733115.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Callithrix jacchus]
Length = 1124
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 193/345 (55%), Gaps = 27/345 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+ N+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 122 GLHNLGNTCFFNATIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 170
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 171 NHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 230
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +DI+L+I
Sbjct: 231 DRQ--------------TQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDIALEIRQ 276
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 277 AANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 336
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 337 KITKDVGYPEFLNMRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 395
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
NDS V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 396 MNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGPISKTGSSS 440
>gi|196000410|ref|XP_002110073.1| hypothetical protein TRIADDRAFT_53651 [Trichoplax adhaerens]
gi|190588197|gb|EDV28239.1| hypothetical protein TRIADDRAFT_53651 [Trichoplax adhaerens]
Length = 870
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/326 (40%), Positives = 190/326 (58%), Gaps = 26/326 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+CYLNSVLQCL YTPPLAN+ L QH C+++ C C L+
Sbjct: 106 GLVNLGNTCYLNSVLQCLCYTPPLANYALAEQHKKDCRKIGF-----------CVLCELQ 154
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+VR L + + P I + L+ A H + GRQEDAHEFLRY++D ++CL
Sbjct: 155 SLMVRCLKSNGSSVKPWPIVNKLKNIASHIQFGRQEDAHEFLRYLVDGIQSSCL------ 208
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+ + + ++++ IFGG L+S V+C C +S K D ++D+SLDI +
Sbjct: 209 ------AAYPKNLDQYSKDTTMIYRIFGGYLRSLVQCAQCKYKSIKYDPMLDLSLDIADL 262
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFG 265
+L ++KF +PE+L G + Y C CK V A K+ +I ++P +L I +KRF +FG
Sbjct: 263 NTLSAMLRKFIEPEILSGRDMYTCSKCKVKVKAMKKFTIHRAPVVLTIPIKRFNKFSLFG 322
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
GK + I F E L L +M + P Y L+G +VHSG S +SGHYY Y+K + +WY
Sbjct: 323 GKNSRKIKFTETLDLRPYMTSKTGSPL-LYNLYGVLVHSGGSCNSGHYYCYVKSSNNQWY 381
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFI 351
C NDS+V+ S + VL ++ YILF+I
Sbjct: 382 CMNDSHVTKSNINAVLLQEAYILFYI 407
>gi|167526008|ref|XP_001747338.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774173|gb|EDQ87805.1| predicted protein [Monosiga brevicollis MX1]
Length = 1125
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 153/418 (36%), Positives = 225/418 (53%), Gaps = 64/418 (15%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
+LQ++WQ + +R GP GL N+GN+C+LN+VLQCLTYTP LA F L S C
Sbjct: 189 QLQLNWQ------QTRRIGP--GLVNMGNTCFLNAVLQCLTYTPALAQFLL----SDDCT 236
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLD-APAKIQSCLRIFAEHFKCGRQED 124
+++ + DA L + R+LS P I S LR + F+ GRQED
Sbjct: 237 RMSRNKGPDA-------LHNLATHVRRALSSSAGPSITPQAIVSKLRTIYKRFRLGRQED 289
Query: 125 AHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
AHEF+R++I+A + + G + + +SV+ IFGG L+SQV+C
Sbjct: 290 AHEFMRFLIEALQKSAV-------------STVGQLDERSKTTSVIHGIFGGYLRSQVRC 336
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
L+C ESN D +D+SL+I +L +A++ FF PE L N+Y+CD C+K V A KQ
Sbjct: 337 LSCKYESNTYDPFLDLSLEIGKCQTLDKALRHFFSPEKLLRENQYRCDGCRKYVDALKQF 396
Query: 245 SILQSPNILVIQLKRFEGI--FGGKIDKAIAFEEVLVLSSFMCKASQ----DPQPEYKLF 298
S PN+L +QLKRF I FG K+ + + + E+L ++ ++ K Q D Y+L+
Sbjct: 397 SCHHLPNVLTVQLKRFSFISMFGSKVGQFVQYPEILDMAPYVNKTQQASMTDRGTRYRLY 456
Query: 299 GTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR-ANQRP 357
+VH+G S SGHYY Y++++ WY +D+ VS ++ QEV+ ++ YILF+ R AN RP
Sbjct: 457 AVLVHAGHSLQSGHYYCYVRNSNNIWYRMDDARVSTASQQEVMRQQAYILFYTRIANPRP 516
Query: 358 VS--------------------ANGTFASNGVKSHENGKEAYKGV----KGTVPLKAV 391
+ A AS+ + S E+G+ K V TVP KA
Sbjct: 517 SAPVVAKADAQAKPKATEPKPKATPPLASDPITSEEDGRPQAKRVAREAAETVPDKAT 574
>gi|390353834|ref|XP_001179436.2| PREDICTED: uncharacterized protein LOC754104 [Strongylocentrotus
purpuratus]
Length = 1340
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 134/332 (40%), Positives = 189/332 (56%), Gaps = 26/332 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N+GN+C+LNS LQCLTYT PLAN+ L QH C+ C C L
Sbjct: 135 GLINMGNTCFLNSTLQCLTYTAPLANYLLSHQHKEECRSYGF-----------CILCDLY 183
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+ P + L+ A+H GRQEDAHEFLRYVI+A +CL
Sbjct: 184 THIQRAFQHPNQAIRPMNMIHKLKSIAKHMHIGRQEDAHEFLRYVIEAMQKSCL------ 237
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
SG + + +S V +IFGG +S+V C AC ++S+ D +DISLDI ++
Sbjct: 238 ------SGYDNKLDRYSKETSPVHQIFGGYYRSRVICAACQSKSDTFDPFLDISLDIKHA 291
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFG 265
S+ +A+ + Q E+LDG+N Y+C C + V A+K+ +I + PNIL + LKRFE
Sbjct: 292 PSVHKALNRLIQSEMLDGDNAYQCKRCNRKVLAQKRFTIHRCPNILTLCLKRFEFNRFSM 351
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
GKI+K +++ E L L FM + ++ P Y+L+ + H G S +SGHYY Y++ WY
Sbjct: 352 GKINKEVSYSEYLNLRPFMSE-TKGPAVGYQLYAVLKHEGGSCNSGHYYCYVRAPNQSWY 410
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
C NDSYVS +L VL++ Y+LF+IR +P
Sbjct: 411 CMNDSYVSQCSLNRVLNQNAYVLFYIRKPPKP 442
>gi|405973690|gb|EKC38387.1| Ubiquitin carboxyl-terminal hydrolase 36 [Crassostrea gigas]
Length = 1002
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 140/372 (37%), Positives = 201/372 (54%), Gaps = 36/372 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N+GN+C+LNS LQCL YT PL N+C +H+ CKQ C C L+
Sbjct: 100 GLVNMGNTCFLNSTLQCLAYTAPLVNYCFSGEHNQTCKQPGF-----------CMMCELQ 148
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ I R + P I L++ A+H GRQEDAHEFLRYV+D+ + L
Sbjct: 149 RHIKRCYENSGSNIKPQAILQKLKMIAKHMHWGRQEDAHEFLRYVVDSMQKSIL------ 202
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++VV +IFGG L+SQV+CL C +SN D +DISLDI
Sbjct: 203 -------NGHAKLDKFSKETTVVNQIFGGYLRSQVQCLRCKEKSNTYDPFLDISLDIKTV 255
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFG 265
SL++A +K+ PE LD +N Y C+ CK+ V A K+ S+ + PN+L + LKRF+ +
Sbjct: 256 PSLEKAFEKYVLPEKLDCDNAYMCNRCKQKVPALKRFSVHKPPNVLTVSLKRFDYSKMVQ 315
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
GKI + + F E L L +M +P + L +VHSG++ +SGHYY Y+K + G WY
Sbjct: 316 GKIGRHVHFPEKLNLRPYMSNRGGEPIL-FHLNAVLVHSGYTANSGHYYCYVKASSGSWY 374
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIRA-----NQRPVSANGTFASNGVKSHE----NGK 376
C NDS V ++ VL + Y+LF+ +A +PVS+ + A++ K NG
Sbjct: 375 CMNDSNVQQVSVNRVLGAEAYVLFYTKAFTEISAPKPVSSMTSLANHVDKKANLKLLNGL 434
Query: 377 EAYKGVKGTVPL 388
Y VP+
Sbjct: 435 RKYPSTDTGVPV 446
>gi|10434580|dbj|BAB14306.1| unnamed protein product [Homo sapiens]
gi|37727299|gb|AAO34133.1| deubiquitinating enzyme 1 [Homo sapiens]
Length = 548
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 194/345 (56%), Gaps = 27/345 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGS-----------FCMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 278 AANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 337
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 KITKDVGYPEFLNIRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 396
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
NDS V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 397 MNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSS 441
>gi|426355440|ref|XP_004045130.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Gorilla
gorilla gorilla]
Length = 1237
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 135/328 (41%), Positives = 192/328 (58%), Gaps = 42/328 (12%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS CK S L C C++
Sbjct: 48 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCKC----SVL-------CLLCVMI 96
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
K P Q+ I A HF+ G QEDAHEFL+Y +DA CL KL
Sbjct: 97 K--------------PCLYQNFTGI-ARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKL 141
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R +++V +IFGG L+S+VKCL C S+ D +DI+L+I
Sbjct: 142 DRH--------------TQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 187
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GG
Sbjct: 188 AQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG 247
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 248 KIAKDVKYPEYLDIRPYMSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQ 306
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 307 MNDSIVSTSDIRSVLSQQAYVLFYIRSH 334
>gi|147856956|emb|CAN81381.1| hypothetical protein VITISV_018447 [Vitis vinifera]
Length = 471
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/291 (50%), Positives = 186/291 (63%), Gaps = 8/291 (2%)
Query: 290 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILF 349
D PEY LF TIVHSG+SP+SGHYYAYIKDA+GRWYCCNDSYVS+STLQ VLSEKVYILF
Sbjct: 151 DSHPEYNLFATIVHSGYSPESGHYYAYIKDAMGRWYCCNDSYVSLSTLQGVLSEKVYILF 210
Query: 350 FIRANQRPVSANGTFASNGVKSHE-NGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTI 408
F R N R + FAS+ VK+ + NG K + +P+K TK + E SS STI
Sbjct: 211 FSRTNARISPPSKAFASHNVKNRDCNGNNTSKNPRTALPVKTRHTKQNVEHSSGMDTSTI 270
Query: 409 SKVEKVPSNPRLKFSISGSSGCKGVPPTSNGKVNVHKSQSVKMNGVVKDSVPKEKSGKDP 468
SKV+KVPS+ ++K + + K V T NGK++VHK+Q ++ NG D V K K G
Sbjct: 271 SKVDKVPSSLQIKSNSFEKTVSKRVLATGNGKLDVHKNQILEKNG---DVVEKSKKGTAS 327
Query: 469 FINTNGSYKSKRVDLVGRGNDLASVSTSENGDTQSVGLNPVKPDPHEGNCTSSRTTAGRV 528
NTNG +KRVD N VS +EN Q++ N K D +EGN SR TA
Sbjct: 328 LANTNGFSINKRVDAADSVNGF--VSANENDKLQNISGNSGKVDLYEGNVVKSRMTAEGR 385
Query: 529 PDPAKLLNGSVKFDTDISGSKRKSQE--SCILLAQDSESLAKLQELEEVLK 577
+ ++ NG VK +SG KRKSQ+ SCILLAQD+ SLAK++E ++ +K
Sbjct: 386 SNFHEVHNGGVKCPPGVSGVKRKSQDKGSCILLAQDAHSLAKVEEFKDGMK 436
>gi|156359561|ref|XP_001624836.1| predicted protein [Nematostella vectensis]
gi|156211638|gb|EDO32736.1| predicted protein [Nematostella vectensis]
Length = 406
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/342 (41%), Positives = 200/342 (58%), Gaps = 31/342 (9%)
Query: 21 KRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
+R GP GL NLGN+C+LNSV+Q LTYT PL N+ +H+ C Q+ G
Sbjct: 87 RRMGP--GLSNLGNTCFLNSVVQVLTYTAPLVNYLATQEHTREC-QMVG----------F 133
Query: 81 CPFCILEKRIVRSLSVDLTLDA-PAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNT 139
C C L++ I+R+ + P I LR A+H + G QEDAHEFLRYVID +
Sbjct: 134 CMMCELQRHILRTFNHQQNESIKPLCIIQRLRSIAKHLRFGHQEDAHEFLRYVIDGMQKS 193
Query: 140 CLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMD 199
CL +G + + +++V IFGG +SQV+CL C SN D +M+
Sbjct: 194 CL------------AGQPEKMDRYSKETTIVHGIFGGYYRSQVQCLKCHNTSNTFDPLME 241
Query: 200 ISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
I +DI +S S+ A+Q+ + E+LDG+N Y+C CKK V A KQ+ I + PNIL IQLKR
Sbjct: 242 IMVDIKHSPSVVRAIQRMCKAELLDGDNLYQCPRCKKKVPAHKQVLIHRPPNILTIQLKR 301
Query: 260 FE--GIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYI 317
F+ +FGGK+ K I + E L L FM + P +YKL+G +VHSG+S +SGHYY Y+
Sbjct: 302 FDYHHMFGGKVSKEITYTEHLDLRPFMTNP-KGPPLKYKLYGVLVHSGYSCNSGHYYCYV 360
Query: 318 KDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF--IRANQRP 357
+ + WY NDS V L VL+++ Y+LF+ ++A Q P
Sbjct: 361 RGSNDCWYNMNDSMVRQVGLNTVLAQQAYLLFYSRVKARQTP 402
>gi|194676314|ref|XP_580726.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Bos taurus]
Length = 1106
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 124/331 (37%), Positives = 187/331 (56%), Gaps = 32/331 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHTRGCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLK--- 144
I+++ + P LR A HF+ G QEDAHEFLRY I
Sbjct: 172 NHIIQAFANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIXXXXXXXXXXXXXX 231
Query: 145 ---KLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDIS 201
KL R+ +++V +IFGG L+S+VKC C + S+ D +D++
Sbjct: 232 XXXKLDRQ--------------TQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVA 277
Query: 202 LDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE 261
L+I + ++ A++ F +P+VL G N Y C CKK V A K+ +I ++ N+L + LKRF
Sbjct: 278 LEIRQAANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFA 337
Query: 262 GIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI 321
GGKI K + + E L + +M ++S +P Y L+ +VHSG+S +GHYY Y+K +
Sbjct: 338 NFSGGKITKDVGYPEFLNIRPYMSQSSGEPV-MYGLYAVLVHSGYSCHAGHYYCYVKASN 396
Query: 322 GRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 397 GQWYQMNDSLVHASNIKVVLNQQAYVLFYLR 427
>gi|38014646|gb|AAH60390.1| Usp36 protein [Xenopus laevis]
Length = 715
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/352 (36%), Positives = 197/352 (55%), Gaps = 33/352 (9%)
Query: 4 AHELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSL 63
A +L M W ++ R G GL+NLGN+C+LN+ +QCLTYTPPLAN+ L +H+S
Sbjct: 105 ADKLSMKW------DRISRVGA--GLQNLGNTCFLNATVQCLTYTPPLANYLLSKEHTSN 156
Query: 64 CKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQE 123
C+Q C CI++ +++ + P L+ A HF+ G QE
Sbjct: 157 CQQ-----------SGFCMLCIMQNHLIQVFANSGNNVKPVSFIRELKRIARHFRFGSQE 205
Query: 124 DAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVK 183
DAHEFLRY IDA CL G + + +S+V +IFGG L+S+V
Sbjct: 206 DAHEFLRYTIDAMQKACL-------------NGYARLDRHSQATSLVHQIFGGYLRSRVT 252
Query: 184 CLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C C S+ D +DI+L+I N ++ A++ F + ++L G N Y C CKK V A K+
Sbjct: 253 CSICKNVSDTYDPYLDIALEIRNVPNIVCALEMFVKSDILSGENAYMCARCKKKVPASKR 312
Query: 244 MSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH 303
S+ + N+L + LKRF GGKI K + + E L L +M + + +P Y L+ +VH
Sbjct: 313 FSVHRDSNVLTLSLKRFANSSGGKITKEVGYPEFLNLRPYMSQRNGNPV-MYALYAVLVH 371
Query: 304 SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQ 355
SG+S +GHYY Y+K + G+W+ NDS V S ++ VL+++ Y+LF++R ++
Sbjct: 372 SGYSCHAGHYYCYVKASNGQWFQMNDSLVHASNIKVVLNQQAYVLFYLRVSE 423
>gi|441643579|ref|XP_003278478.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Nomascus leucogenys]
Length = 1122
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 194/345 (56%), Gaps = 28/345 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKR + + G
Sbjct: 278 AANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRCQ-LQRG 336
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 337 KITKDVGYPEFLNIRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 395
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
NDS V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 396 MNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSS 440
>gi|301616377|ref|XP_002937632.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Xenopus
(Silurana) tropicalis]
Length = 809
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 132/352 (37%), Positives = 195/352 (55%), Gaps = 33/352 (9%)
Query: 4 AHELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSL 63
A +L M W ++ R G GL+NLGN+C+LN+ +QCLTYTPPLAN+ L +HS
Sbjct: 105 ADKLSMKW------DRISRVG--AGLQNLGNTCFLNATVQCLTYTPPLANYLLSKEHSRN 156
Query: 64 CKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQE 123
C+Q C CI++ +++ + P L+ A HF+ G QE
Sbjct: 157 CQQ-----------SGFCMLCIMQNHLIQVFANSGNNVKPVSFIRDLKKIARHFRFGSQE 205
Query: 124 DAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVK 183
DAHEFLRY IDA CL G + + +S+V +IFGG L+S+V
Sbjct: 206 DAHEFLRYTIDAMQKACL-------------NGYARLDRHSQATSLVHQIFGGYLRSRVT 252
Query: 184 CLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C C S+ D +DI+L+I N ++ A++ F + +VL G N Y C CKK V A K+
Sbjct: 253 CSVCKNVSDTYDPYLDIALEIRNVPNIVCALEMFVKSDVLSGENAYMCARCKKKVPACKR 312
Query: 244 MSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH 303
S+ + N+L + LKRF GGKI K + + E L L +M + + P Y L+ +VH
Sbjct: 313 FSVHRESNVLTLSLKRFANSSGGKITKEVGYPEFLNLRPYMSQRNGVPV-MYALYAVLVH 371
Query: 304 SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQ 355
SG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R ++
Sbjct: 372 SGYSCHAGHYYCYVKASNGQWYQMNDSLVHASNIKVVLNQQAYVLFYLRVSE 423
>gi|119575450|gb|EAW55048.1| ubiquitin specific peptidase 42, isoform CRA_b [Homo sapiens]
Length = 1176
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 126/328 (38%), Positives = 180/328 (54%), Gaps = 64/328 (19%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTC----------------------- 148
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
A HF+ G QEDAHEFL+Y +DA CL KL
Sbjct: 149 -------------------------IARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKL 183
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R +++V +IFGG L+S+VKCL C S+ D +DI+L+I
Sbjct: 184 DRH--------------TQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 229
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GG
Sbjct: 230 AQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG 289
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 290 KIAKDVKYPEYLDIRPYMSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQ 348
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 349 MNDSIVSTSDIRSVLSQQAYVLFYIRSH 376
>gi|51094457|gb|EAL23716.1| ubiquitin specific protease 42 [Homo sapiens]
Length = 1246
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 179/327 (54%), Gaps = 62/327 (18%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYTPPLAN+ L +HS C
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTC----------------------- 148
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
A HF+ G QEDAHEFL+Y +DA CL
Sbjct: 149 -------------------------IARHFRFGNQEDAHEFLQYTVDAMQKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + +++V +IFGG L+S+VKCL C S+ D +DI+L+I +
Sbjct: 178 -------NGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF GGK
Sbjct: 231 QSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY
Sbjct: 291 IAKDVKYPEYLDIRPYMSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRAN 354
NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 350 NDSIVSTSDIRSVLSQQAYVLFYIRSH 376
>gi|348568324|ref|XP_003469948.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 42-like [Cavia porcellus]
Length = 1224
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/338 (36%), Positives = 193/338 (57%), Gaps = 27/338 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+ N+ LQCLTYT PLAN+ L +HS C + C CI++
Sbjct: 108 GLQNLGNTCFANAALQCLTYTAPLANYMLSHEHSETC-----------HAEGFCMMCIMQ 156
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I ++L+ + P + + ++ A HF+ G QEDAHEFL++ +DA CL
Sbjct: 157 DHITQALNNPGDVIKPMFVINEMQRIASHFQIGEQEDAHEFLQHTVDAMQEACL------ 210
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + ++++ ++FGG L+S+V+CL C S+ D +DI+L+I +
Sbjct: 211 -------SGSNELDRHTQATTLICQVFGGYLRSRVQCLNCKGVSDTFDPYLDITLEIKGA 263
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
++ EA+ +F +PE LDG N Y+C CK +V A K +I QS N+L++ LKRF GGK
Sbjct: 264 RTINEALAQFVKPEQLDGENCYQCSKCKIMVPASKNFTIHQSSNVLILSLKRFSNSTGGK 323
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + +P Y L+ ++H+G++ GHY ++K + G WY
Sbjct: 324 IAKDVKYPEYLDIRPYMSQPNGEPI-VYTLYAVLIHAGYNCRVGHYLCHVKASNGLWYQM 382
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFA 365
NDS VS S + VLS++ Y+LF+IR N V + FA
Sbjct: 383 NDSKVSPSDTESVLSQQAYVLFYIRTND--VKSGSEFA 418
>gi|224075485|ref|XP_002187464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Taeniopygia
guttata]
Length = 1079
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 131/364 (35%), Positives = 198/364 (54%), Gaps = 38/364 (10%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQ 66
L M W E+ R G GL NLGN+C+LNS LQCLTYTPPL N+ L +H C
Sbjct: 110 LSMKW------ERVHRVG--AGLSNLGNTCFLNSALQCLTYTPPLTNYLLSREHGRTCAH 161
Query: 67 LTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAH 126
+ C C ++ ++++ + P I L+ + + + GRQEDAH
Sbjct: 162 GSF-----------CMMCTMQNHMIQTFANSGNAIKPLSIIRDLKKISHNLRFGRQEDAH 210
Query: 127 EFLRYVIDACHNTCLR-LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
EFLRY IDA CL KL R+ +++V +IFGG L+S+VKCL
Sbjct: 211 EFLRYTIDAMQKACLNGYTKLDRQ--------------TQATTLVHQIFGGYLRSRVKCL 256
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
C S+ D +D++L++ + ++ A++ F +PE L G+N Y+C C+K V A K+ +
Sbjct: 257 ECKTVSDTYDPYLDVTLEVERAANIVRALELFVKPEQLGGDNAYRCSMCRKKVLASKRFT 316
Query: 246 ILQSPNILVIQLKRF---EGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIV 302
I ++ N+L I LKRF G KI K + + E L + FM + DP Y L+ +V
Sbjct: 317 IHRASNVLTISLKRFGSCSSSGGRKITKDVGYPEFLDIRPFMSEPKGDPI-TYGLYAVLV 375
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANG 362
HSG+S ++GHY+ Y+K + G+WY ND V S ++ VL+++ Y+LF++R S+ G
Sbjct: 376 HSGYSCNAGHYFCYVKASNGQWYRMNDHEVHPSNIKVVLNQQAYVLFYLRLGSPRKSSAG 435
Query: 363 TFAS 366
A+
Sbjct: 436 PMAT 439
>gi|307103899|gb|EFN52156.1| hypothetical protein CHLNCDRAFT_139325 [Chlorella variabilis]
Length = 799
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 138/351 (39%), Positives = 199/351 (56%), Gaps = 32/351 (9%)
Query: 4 AHELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSL 63
A +L + W+ E RK G GL+NLGN+C++NSVLQ L +TPPLA L +
Sbjct: 23 AEDLTLQWR-----EMRKAGA---GLQNLGNTCFMNSVLQLLVHTPPLAELLLSGGFGRV 74
Query: 64 CKQLTGDSALDAERKRECPFCILEKRIVRSLS-VDLTLDAPAKIQSCLRIFAEHFKCGRQ 122
+ A++ P + + + RSL+ + AP K LR + F+ GRQ
Sbjct: 75 H-----NGAVNGF----YPIQLARELVSRSLAQTTRSPLAPMKFAKSLRRISRSFRLGRQ 125
Query: 123 EDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQV 182
EDAHEFL ++DA H + +G +S + IFGG ++SQV
Sbjct: 126 EDAHEFLIALLDAMHEASI------------AGITPKPSPELAQTSFIYRIFGGRMRSQV 173
Query: 183 KCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
KC CG ESN D +D+SL+I + S+K A++ F + EVLDG NKYKC +K V A K
Sbjct: 174 KCSECGYESNTYDPCIDLSLEITRASSVKRALEHFTKGEVLDGGNKYKCPRQQKAVRAVK 233
Query: 243 QMSILQSPNILVIQLKRFEGIFGG-KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTI 301
+M++ +PN+L+IQLKRFE F G KI K I F+ L L FM +A P Y L+ +
Sbjct: 234 RMTVDSAPNVLMIQLKRFEFSFSGHKISKKIDFDLELDLGPFMSEAPLVPA-LYDLYAVL 292
Query: 302 VHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
VHSG S SGHYYAY++ G W+ C+D++V+ ++V+++K YILF+++
Sbjct: 293 VHSGHSVHSGHYYAYVRAPNGIWHICDDTHVAQVAERQVMAQKAYILFYLK 343
>gi|330822504|ref|XP_003291691.1| hypothetical protein DICPUDRAFT_156310 [Dictyostelium purpureum]
gi|325078127|gb|EGC31796.1| hypothetical protein DICPUDRAFT_156310 [Dictyostelium purpureum]
Length = 536
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 182/325 (56%), Gaps = 26/325 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N+GN+C++NS++QCLTY+ LAN+ + +HS C K C FC LE
Sbjct: 115 GLYNIGNTCFMNSIIQCLTYSSTLANYMISREHSKNC-----------TNKSFCIFCSLE 163
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I+ S P I + A F+ GRQED+HEF +VID+ CL
Sbjct: 164 DHIIISHRETGKSITPIVIAKNIEKVAPTFRIGRQEDSHEFFCFVIDSLQKVCL------ 217
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S G + ++++ IFGG L+SQ+KC C ESNK DE MD+S+DI +
Sbjct: 218 -----SKFPKGTISPRDSMTTIIGSIFGGYLRSQLKCSVCQYESNKFDEFMDLSIDINQA 272
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI--FG 265
SL + +Q F +PE+LDG N YKC CKKLV A K + I SP IL +Q+KRF + +G
Sbjct: 273 DSLTKGLQNFVKPEILDGENGYKCAKCKKLVKAEKSLQIEISPPILTVQIKRFSFLDSYG 332
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
GK +K I F + L LS +M + + Y L+ +VH G S +SGHYY Y+K G WY
Sbjct: 333 GKDNKHIQFGQTLDLSPYMTQT--NDHSIYDLYAVLVHLGDSTNSGHYYCYVKGTNGVWY 390
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFF 350
+DS VS +L+ VL K Y+LF+
Sbjct: 391 KMDDSMVSQVSLKSVLRSKAYMLFY 415
>gi|357148128|ref|XP_003574640.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like
[Brachypodium distachyon]
Length = 970
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/338 (39%), Positives = 190/338 (56%), Gaps = 27/338 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL NLGNSCY N+VLQCL +T PL + L HS C K C C
Sbjct: 451 PFGLHNLGNSCYANAVLQCLMFTRPLTAYFLGGLHSKNCSN-----------KEWCFMCE 499
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
EK +V L +P I S L F G+QEDAHEFLR+ IDA + C+ K+
Sbjct: 500 FEKLVVEGKHGKTAL-SPTGILSHLHEIGSSFGPGKQEDAHEFLRHSIDAMQSVCM--KE 556
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
R+ G + +++V+ IFGG L+S++KC C S + + ++D++++I
Sbjct: 557 ARK---------SGAHRLAEETTLVQLIFGGYLRSKIKCTRCHGSSEQSERMLDLTVEID 607
Query: 206 NSCS-LKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
S L+EA+Q+F EVLDGNN+Y+C CK A+K+++I ++PN+L I LKR++
Sbjct: 608 GDISSLEEALQRFTSTEVLDGNNRYQCTRCKSYERAKKKLTISEAPNVLTIALKRYQSGK 667
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIG 322
GKI KAI F E L LSS+M + D P Y L+G +VH + SGHY Y+KD G
Sbjct: 668 FGKISKAIRFPETLNLSSYM-STTDDNSPVYSLYGVVVHHDVMNAAFSGHYVCYVKDTHG 726
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSA 360
+WY +DS V +L+ V+S+ Y+L + R + R S+
Sbjct: 727 KWYKTDDSQVKSVSLENVMSKCAYMLLYARCSPRAPSS 764
>gi|168015744|ref|XP_001760410.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688424|gb|EDQ74801.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 312
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 131/332 (39%), Positives = 188/332 (56%), Gaps = 33/332 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNSVLQCLTYTPPLA + QH + C+ C C L+
Sbjct: 1 GLSNLGNTCFLNSVLQCLTYTPPLAGYLDSGQHKATCRAAGF-----------CAMCALQ 49
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ + ++L+ +P+ + LR ++ F+ RQEDAHE+LR +I+ HN CL
Sbjct: 50 EHVRQALASSGGAVSPSTLVKNLRCISKSFRMWRQEDAHEYLRCLIEGLHNCCL------ 103
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G ++ S++ +IFGG L+SQVKC C SN D ++D+SL+I+ +
Sbjct: 104 ------PPGVKSNSAVSQERSLIHKIFGGRLRSQVKCTVCLTCSNTYDPLLDLSLEIVRA 157
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFG 265
SL +A+ +F E L+G+NKY C +C K V A KQ +I + PNIL IQ KRF G G
Sbjct: 158 DSLTKALNRFTAVEALEGDNKYHCSHCNKKVRALKQFTIDKPPNILTIQFKRFSSTGSSG 217
Query: 266 GKIDKAIAFEEVLVLSSFM-----CKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDA 320
GKIDK I F L L ++ C A+ +Y L+ +VH+G+S SGHYY +++
Sbjct: 218 GKIDKKIEFGRTLDLKPYISNPQVCSAT---DAKYSLYAVLVHAGWSTHSGHYYCFVRTK 274
Query: 321 IGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
W+ +DS V + + VL +K YILF+IR
Sbjct: 275 GDMWHALDDSRVKQVSEKSVLDQKAYILFYIR 306
>gi|409049827|gb|EKM59304.1| hypothetical protein PHACADRAFT_88204 [Phanerochaete carnosa
HHB-10118-sp]
Length = 667
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 129/346 (37%), Positives = 185/346 (53%), Gaps = 29/346 (8%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQ 66
+ MSW P + KRG GL N GN+C+LNS LQCL +TPPL + C
Sbjct: 114 IDMSWPP-----QTKRGS---GLINTGNTCFLNSALQCLLHTPPLLRVLFQHGRGEPC-- 163
Query: 67 LTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAH 126
+ + C C + + S + + P I L+ A+ + GRQED+H
Sbjct: 164 -------EVPKNSFCMSCNMRELAADSFTAKHAM-VPYTITRALQHIAKTMRRGRQEDSH 215
Query: 127 EFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLA 186
EFLRY +DA +CL G E ++ V +IFGG L+S+VKCL+
Sbjct: 216 EFLRYAVDALQKSCL--------AGQPQPQSRKVEPKLAETTWVHKIFGGRLRSRVKCLS 267
Query: 187 CGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSI 246
CG S+ D ++D+S+DI +L++A++KF + L G NKYKC+ CKK V+A KQ ++
Sbjct: 268 CGHNSDTFDSMLDLSIDIFGVSNLRDALRKFVAVDQLRGQNKYKCEKCKKHVAADKQFTV 327
Query: 247 LQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF 306
+P +L I LKRF + G KI + ++E + L M + P Y LFG I H+G
Sbjct: 328 HDAPMVLTIHLKRFSPM-GRKIPHLVGYDERISLQPVMSEGQHG--PTYTLFGVISHAGG 384
Query: 307 SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
P SGHYYA++KDA G+W+ ND VS + + + YILF+IR
Sbjct: 385 GPSSGHYYAHVKDAAGQWHEMNDDTVSRQSGAPLGMKNAYILFYIR 430
>gi|222640740|gb|EEE68872.1| hypothetical protein OsJ_27681 [Oryza sativa Japonica Group]
Length = 897
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/338 (38%), Positives = 191/338 (56%), Gaps = 26/338 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL NLGNSCY N+VLQCL +T PL ++ L HS C +K C C
Sbjct: 368 PFGLHNLGNSCYANAVLQCLMFTRPLTSYLLGGLHSKNC-----------SKKEWCFMCE 416
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
EK + + L +P I S L F G+QEDAHEFLRY IDA + C+ K+
Sbjct: 417 FEKLVGEGRQGKIAL-SPTGILSHLPDIGSSFGPGKQEDAHEFLRYAIDAMQSVCM--KE 473
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
R+ G ++ +++++ IFGG L+S+++C C A S + + I+D++++I
Sbjct: 474 ARK---------SGTHRLHEETTLMQLIFGGYLRSKIRCTRCDATSEQHERILDLTVEID 524
Query: 206 NSCS-LKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
S L+ A+++F EVLDG+NKYKC CK A+K+++I ++PN+L I LKR++
Sbjct: 525 GDISSLEGALERFTSTEVLDGDNKYKCSRCKSHERAKKKLTISEAPNVLTIALKRYQSGK 584
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIG 322
GKI+KAI F E L L +M + D P Y L+ +VH + SGHY Y+KD G
Sbjct: 585 FGKINKAIRFPETLNLQRYMSPKADDTSPVYSLYAVVVHHDIMNAAFSGHYVCYVKDTHG 644
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSA 360
+WY +DS V +L+ V+S+ Y+L + R + R S+
Sbjct: 645 KWYKTDDSQVKPVSLENVMSKCAYMLLYARCSPRAPSS 682
>gi|115476910|ref|NP_001062051.1| Os08g0478500 [Oryza sativa Japonica Group]
gi|42407867|dbj|BAD09009.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
gi|113624020|dbj|BAF23965.1| Os08g0478500 [Oryza sativa Japonica Group]
Length = 978
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/338 (38%), Positives = 191/338 (56%), Gaps = 26/338 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL NLGNSCY N+VLQCL +T PL ++ L HS C +K C C
Sbjct: 449 PFGLHNLGNSCYANAVLQCLMFTRPLTSYLLGGLHSKNCS-----------KKEWCFMCE 497
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
EK + + L +P I S L F G+QEDAHEFLRY IDA + C+ K+
Sbjct: 498 FEKLVGEGRQGKIAL-SPTGILSHLPDIGSSFGPGKQEDAHEFLRYAIDAMQSVCM--KE 554
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
R+ G ++ +++++ IFGG L+S+++C C A S + + I+D++++I
Sbjct: 555 ARK---------SGTHRLHEETTLMQLIFGGYLRSKIRCTRCDATSEQHERILDLTVEID 605
Query: 206 NSCS-LKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
S L+ A+++F EVLDG+NKYKC CK A+K+++I ++PN+L I LKR++
Sbjct: 606 GDISSLEGALERFTSTEVLDGDNKYKCSRCKSHERAKKKLTISEAPNVLTIALKRYQSGK 665
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIG 322
GKI+KAI F E L L +M + D P Y L+ +VH + SGHY Y+KD G
Sbjct: 666 FGKINKAIRFPETLNLQRYMSPKADDTSPVYSLYAVVVHHDIMNAAFSGHYVCYVKDTHG 725
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSA 360
+WY +DS V +L+ V+S+ Y+L + R + R S+
Sbjct: 726 KWYKTDDSQVKPVSLENVMSKCAYMLLYARCSPRAPSS 763
>gi|114598756|ref|XP_001139436.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Pan
troglodytes]
Length = 530
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/341 (34%), Positives = 191/341 (56%), Gaps = 31/341 (9%)
Query: 15 LLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALD 74
LL R+ GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C
Sbjct: 68 LLLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC---------- 117
Query: 75 AERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVID 134
R + C C ++ I R+L + P + + A F G+QEDAHEFL + +D
Sbjct: 118 -HRHKGCMLCTMQAHITRALHI------PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVD 170
Query: 135 ACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKV 194
A CL G E + ++++ +IFGG +SQ+KCL C S+
Sbjct: 171 AMEKACL-------------PGHKQVEHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTF 217
Query: 195 DEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
D +DI+LDI + S+++A+++ +PE L+G N Y C C + A K +++ S +L+
Sbjct: 218 DPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGLCLQRAPASKTLTLHTSAKVLI 277
Query: 255 IQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYY 314
+ LKRF + G K+ K + + E L + +M + + P Y L+ +VH+G+S +GHY+
Sbjct: 278 LVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLV-YVLYAVLVHAGWSCHNGHYF 336
Query: 315 AYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+Y+K G+WY +D+ V+ S++ VLS++ Y+LF+I+ ++
Sbjct: 337 SYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSE 377
>gi|109133433|ref|XP_001082678.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Macaca
mulatta]
Length = 530
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 188/328 (57%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSPTC-----------HRHKGCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L + P ++ + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRALHI------PGRVIQPSQALAADFHRGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+K+A+++ +PE L+G N Y C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVKQALEQLVKPEELNGENAYHCGLCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGSK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY
Sbjct: 291 LAKNVHYPECLDMQPYMSQQNTGPL-VYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ S++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTASSITSVLSQQAYVLFYIQKSE 377
>gi|403413958|emb|CCM00658.1| predicted protein [Fibroporia radiculosa]
Length = 1268
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 129/329 (39%), Positives = 184/329 (55%), Gaps = 33/329 (10%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N GN+C+LNS LQCL +TPPL + L S +D + R+ +C+
Sbjct: 696 GLYNTGNTCFLNSALQCLLHTPPLLHV------------LIAHSKVDPCQVRKGAYCMAC 743
Query: 88 KRIVRSLSVDLTLD----APAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
+RS+ D +P++I S + + A+H + GRQED+HEFLRY IDA CL
Sbjct: 744 G--LRSVMFDSHQKHRQFSPSQITSNMHVIAKHMRRGRQEDSHEFLRYAIDALQKACL-- 799
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
+G + ++ V +IFGG L+S+V CL CG S+ D ++D+S+D
Sbjct: 800 ----------AGYPPKLDPKLAETTWVHKIFGGRLRSRVTCLDCGHNSDTFDSVLDLSID 849
Query: 204 ILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI 263
IL S LKEA++KF + L G +KYKC+ CKK V+A KQ ++ +P +L I LKRF I
Sbjct: 850 ILGSSGLKEALRKFTAVDHLKGADKYKCEKCKKAVTADKQFTVHDAPLVLTIHLKRFSPI 909
Query: 264 FGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR 323
GGKI + + ++E L L S M P Y L+ I H+G P+SGHYYA++K + G+
Sbjct: 910 -GGKIGQPVKYDERLSLQSVMSSGQHG--PSYVLYAVISHAGGGPNSGHYYAHVKGSNGQ 966
Query: 324 WYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
WY ND V+ + YILF+IR
Sbjct: 967 WYEMNDDSVTRHPGAPTGMKNAYILFYIR 995
>gi|449061956|sp|C9J2P7.1|U17LF_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
15
Length = 530
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 187/328 (57%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKGCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRALH------NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE L+G N Y C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
IDK + + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY
Sbjct: 291 IDKNVQYPECLDMKLYMSQTNSGPLV-YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ S++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTASSITSVLSQQAYVLFYIQKSE 377
>gi|378925632|ref|NP_001243782.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 12 [Homo
sapiens]
gi|449061964|sp|C9JPN9.1|UL17C_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
12
Length = 530
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 187/328 (57%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKGCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRAL------HNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE L+G N Y C C + A K +++L S +L++ LKRF + G K
Sbjct: 231 QSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY
Sbjct: 291 IAKNVQYPECLDMQPYMSQPNTGPL-VYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ S++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTASSITSVLSQQAYVLFYIQKSE 377
>gi|379643059|ref|NP_001243823.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 15 [Homo
sapiens]
Length = 559
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 187/328 (57%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKGCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRALH------NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE L+G N Y C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
IDK + + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY
Sbjct: 291 IDKNVQYPECLDMKLYMSQTNSGPLV-YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ S++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTASSITSVLSQQAYVLFYIQKSE 377
>gi|363740969|ref|XP_424101.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36, partial
[Gallus gallus]
Length = 884
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 117/314 (37%), Positives = 177/314 (56%), Gaps = 27/314 (8%)
Query: 40 SVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLT 99
+ LQCLTYTPPLA + L +HS C Q C C+++ ++++ +
Sbjct: 1 ATLQCLTYTPPLACYLLSKEHSRACHQ-----------GGFCMMCVMQNHMIQAFANSGN 49
Query: 100 LDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKLRRKGGGSSGGGG 158
P L+ A HF+ G QEDAHEFLRY IDA CL +L R+
Sbjct: 50 AIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLSGCTRLDRQ--------- 100
Query: 159 GGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFF 218
+++V +IFGG L+S+VKC C + S+ D +D+SL+I + ++ A++ F
Sbjct: 101 -----TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVSLEIRQAANIVRALELFV 155
Query: 219 QPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVL 278
+ +VL G+N Y C CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L
Sbjct: 156 KSDVLSGDNAYMCARCKKKVPASKRFTIHRASNVLTLSLKRFANFSGGKITKDVGYPEFL 215
Query: 279 VLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQ 338
+ +M + S DP Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++
Sbjct: 216 NIRPYMSQNSGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHCSNIK 274
Query: 339 EVLSEKVYILFFIR 352
VL+++ Y+LF++R
Sbjct: 275 VVLNQQAYVLFYLR 288
>gi|379030606|ref|NP_001243791.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 21 [Homo
sapiens]
gi|449061961|sp|D6R901.1|U17LL_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
21
Length = 530
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 187/328 (57%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKGCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRALH------NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE L+G N Y C C + A K +++L S +L++ LKRF + G K
Sbjct: 231 QSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY
Sbjct: 291 IAKNVQYPECLDMQPYMSQPNTGPL-VYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ S++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTASSITSVLSQQAYVLFYIQKSE 377
>gi|33333160|gb|AAQ11741.1| deubiquitinating enzyme DUB1 [Homo sapiens]
Length = 530
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 187/328 (57%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKGCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRALH------NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE L+G N Y C C + SA K +++ S +L++ LKRF + G K
Sbjct: 231 QSVQQALEQLVKPEELNGENAYHCGVCLQRASASKTLTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY
Sbjct: 291 IAKNVQYPECLDMQPYMSQQNTGPLV-YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ S++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTASSITSVLSQQAYVLFYIQKSE 377
>gi|395330004|gb|EJF62389.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
Length = 691
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/324 (38%), Positives = 184/324 (56%), Gaps = 18/324 (5%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N GN+C+LNS LQCL +TPPL + K H C ++A C C+L
Sbjct: 126 GLGNTGNTCFLNSALQCLLHTPPLLHILSK--HPESCHSPKSNNA-------SCMICVL- 175
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+++++ + P + + L + A+H + GRQED+HEFLRY +DA + L R
Sbjct: 176 RQVMQDVFTKPHSTIPYPVITKLHVIAKHMRRGRQEDSHEFLRYFVDALQRSALAGAPPR 235
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+ E + V +IFGG L+S+V CL+CG S+ D ++D+S+DI
Sbjct: 236 AEHRHRKVDPKLAE-----KTWVYKIFGGLLRSRVSCLSCGYNSDTFDRMLDLSVDIAGV 290
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
SL++A++KF + L G +KYKC+ CKK V+A KQ +I ++P +L + LKRF + G K
Sbjct: 291 ASLRDALRKFVAVDHLRGADKYKCEKCKKPVNADKQFTIHEAPAVLTVHLKRFSPM-GRK 349
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I I ++E L L FM + S P Y L+G I H+G P+SGHYYA++K A GRW+
Sbjct: 350 IAIPIRYDERLSLEPFMSEGSFGPN--YTLYGVISHAGNGPNSGHYYAHVKGANGRWHEM 407
Query: 328 NDSYVSVSTLQEVLSEKVYILFFI 351
ND YV+ + + YILF+I
Sbjct: 408 NDDYVAPLSGVPTSLKNAYILFYI 431
>gi|328766417|gb|EGF76471.1| hypothetical protein BATDEDRAFT_28405 [Batrachochytrium
dendrobatidis JAM81]
Length = 525
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 131/336 (38%), Positives = 182/336 (54%), Gaps = 39/336 (11%)
Query: 21 KRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
K GP GL N+GN+C+LNSVLQC+TYTPPLA F L+ HSS C+ K
Sbjct: 86 KHIGP--GLVNMGNTCFLNSVLQCMTYTPPLAEFLLRGVHSSSCRT-----------KSF 132
Query: 81 CPFCILEKRIVRSLSVDLTLDA-PAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNT 139
C C++E + L P LR + H + GRQEDAHEF R++I+ N
Sbjct: 133 CAMCVMESHVKHCLQTSSEKPIQPRLFVENLRKISRHIRLGRQEDAHEFTRFLIEGLKN- 191
Query: 140 CLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMD 199
G G T +++ IF G LQSQ+ CL C + SN +D +MD
Sbjct: 192 -----------------GEGDRT--PEATLAHAIFSGKLQSQITCLKCKSTSNTLDPLMD 232
Query: 200 ISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
ISLDI S+++A+ +F E+L N+Y+C C L A KQ+++L+ P +L +QLKR
Sbjct: 233 ISLDIQKCASVEDALARFTTSELLHKQNQYRCSKCNALRDAYKQITVLEPPVVLTVQLKR 292
Query: 260 FEGI---FGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAY 316
F G G KI + F+ VL L FM ++++ Y LF +VHSG S SGHYY +
Sbjct: 293 F-GFGHRVGSKISSPVLFKTVLNLYPFMSQSTKQ-NVLYHLFAVLVHSGGSCHSGHYYCF 350
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+K G WY NDS V + + VL++ Y+LF++R
Sbjct: 351 VKAPDGCWYLMNDSLVQQVSEKTVLAQSAYMLFYVR 386
>gi|169861600|ref|XP_001837434.1| Usp36 protein [Coprinopsis cinerea okayama7#130]
gi|116501455|gb|EAU84350.1| Usp36 protein [Coprinopsis cinerea okayama7#130]
Length = 637
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/348 (38%), Positives = 186/348 (53%), Gaps = 34/348 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N GN+C+LNS LQCL +TPPL + S CK G C C L
Sbjct: 123 GLHNTGNTCFLNSALQCLLHTPPLLRVLSHHKQES-CKVDRG----------FCMACALR 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ +S S AP++I L+ A+H + GRQED HEFLRY IDA +CL
Sbjct: 172 QVAAKSFSSRSPF-APSQITGRLQTIAKHMRKGRQEDTHEFLRYAIDALQKSCL------ 224
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+G + ++ V +IFGG L+S+V C CG S+ D I+D+SLDIL S
Sbjct: 225 ------AGYPPKIDQKLAETTWVHKIFGGRLRSRVTCRDCGYNSDTFDRILDLSLDILKS 278
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
++K+A++KF + L G +KYKC+ CKK V+A K+ +I +P +L + LKRF + G K
Sbjct: 279 DTIKDALRKFVAIDYLKGADKYKCEKCKKPVTAEKRFTIHDAPLVLTVHLKRFSPL-GRK 337
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I + +++ L L FM + S P Y L+G I H+G P SGHYYA++K G+W+
Sbjct: 338 IGHPVTYDDHLSLQPFMSEGSFGPT--YSLYGVICHAGGGPHSGHYYAFVKSRDGKWWEM 395
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKSHENG 375
ND VS + + Y+LF++R A G VKS NG
Sbjct: 396 NDEMVSPINGPPLSKKSAYVLFYMR-------AKGQGLEGAVKSQING 436
>gi|357480083|ref|XP_003610327.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355511382|gb|AES92524.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 855
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 130/327 (39%), Positives = 185/327 (56%), Gaps = 26/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNSVLQCLTYT PLA + +H S C + G C C ++
Sbjct: 93 GLWNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHKSSC-HIAG----------FCALCAIQ 141
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ +L + +P + LR + +F+ RQEDAHE++ ++++ H CL
Sbjct: 142 NHVSCALQATGRIVSPQDMVGNLRCISRNFRKARQEDAHEYMVNLLESMHKCCL------ 195
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G S G E S+V +IFGG L+SQVKC C SNK D +D+SL+IL +
Sbjct: 196 -PSGVPSESPGAFE-----KSLVHKIFGGRLRSQVKCRQCSYSSNKFDPFLDLSLEILKA 249
Query: 208 CSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
SL++A+ F E+LDG K Y C CK+ V A KQ++I ++P +L I LKRF
Sbjct: 250 DSLQKALANFTAAELLDGGEKQYHCQRCKQKVQAVKQLTIHKAPYVLAIHLKRFYAHDPN 309
Query: 267 -KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KI K + F+ L L F+ S D +Y L+G +VHSGFS SGHYY Y++ + WY
Sbjct: 310 IKIKKKVRFDSALNLKPFV-SGSSDGDVKYSLYGVLVHSGFSTHSGHYYCYVRTSNNMWY 368
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ VS QEVL+++ Y+LF++R
Sbjct: 369 TLDDTRVSHVGEQEVLNQQAYMLFYVR 395
>gi|379030602|ref|NP_001243789.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 19 [Homo
sapiens]
gi|449061959|sp|D6RCP7.1|U17LJ_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
19
Length = 530
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 186/328 (56%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKGCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRAL------HNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE L+G N Y C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY
Sbjct: 291 IAKNVQYPECLDMQPYMSQTNTGPLV-YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ S++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTASSITSVLSQQAYVLFYIQKSE 377
>gi|378925634|ref|NP_001243783.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 11 [Homo
sapiens]
gi|449061954|sp|C9JVI0.1|U17LB_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
11
Length = 530
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 186/328 (56%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKGCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRAL------HNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE L+G N Y C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY
Sbjct: 291 IAKNVQYPECLDMQPYMSQTNTGPL-VYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ S++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTASSITSVLSQQAYVLFYIQKSE 377
>gi|379030599|ref|NP_001243788.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 18 [Homo
sapiens]
gi|449061958|sp|D6R9N7.1|U17LI_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
18
Length = 530
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 186/328 (56%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKGCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRAL------HNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE L+G N Y C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY
Sbjct: 291 IAKNVQYPECLDMQPYMSQTNTGPL-VYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ S++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTASSITSVLSQQAYVLFYIQKSE 377
>gi|348550615|ref|XP_003461127.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Cavia
porcellus]
Length = 391
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 121/325 (37%), Positives = 183/325 (56%), Gaps = 31/325 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C++N+ LQCLTYTPPLAN+ L +H+ C C CI++
Sbjct: 98 GLQNLGNTCFVNAALQCLTYTPPLANYMLSREHTKTC-----------HAGGFCVMCIMQ 146
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I+++LS P + + HF+ G QEDAHEFL+Y +DA CL+
Sbjct: 147 AHIIQALS------HPGDAIKPIAVITSHFRFGNQEDAHEFLQYTLDAMQKACLQ----- 195
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + ++++ +IFGG L+S+VKCL C S+ D +D++L+I +
Sbjct: 196 --------GSYELDRHTQATTLIYQIFGGYLRSRVKCLNCRGVSDTFDLYLDVTLEIQDV 247
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ EA+ +F +PE L+G N YKC C +V A K +SI + N+L + LK F G K
Sbjct: 248 RSVNEALAQFVKPEQLEGENCYKCSKCNSMVPASKSLSIHRPSNVLTLTLKGFSNCTGSK 307
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + ++M + S + +Y L+ +VH+G GHY++Y+K + G WY
Sbjct: 308 IAKIVKYPEHLNIRAYMSQPSGEAM-QYSLYAVLVHTGSKCCVGHYFSYVKASNGLWYQM 366
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR 352
ND VS S + VLS++ YILF+IR
Sbjct: 367 NDFMVSPSDISSVLSQQAYILFYIR 391
>gi|379030610|ref|NP_001243792.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 22 [Homo
sapiens]
gi|449061962|sp|D6RA61.1|U17LM_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
22
Length = 530
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 186/328 (56%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKGCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRAL------HNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE L+G N Y C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY
Sbjct: 291 IAKNVQYPECLDMQPYMSQQNTGPLV-YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ S++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTASSITSVLSQQAYVLFYIQKSE 377
>gi|225461822|ref|XP_002283705.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Vitis
vinifera]
Length = 955
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 186/327 (56%), Gaps = 26/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+CYLNSVLQCLTYT PLA + +H + C+ + G C C ++
Sbjct: 109 GLENLGNTCYLNSVLQCLTYTEPLAAYLQSGKHQNSCR-IAG----------FCALCAIQ 157
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
K + R+L + P + S LR + +F+ RQEDAHE++ ++++ H CL
Sbjct: 158 KHVSRALQSTGRILVPKDLVSNLRCISRNFRNARQEDAHEYMVHLLETMHKCCL------ 211
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G S E S+V +IFGG L+SQVKC+ C SNK D +D+SL+I +
Sbjct: 212 -PSGVPSESPSAYE-----KSLVHKIFGGLLRSQVKCMQCSYCSNKFDPFLDLSLEIFKA 265
Query: 208 CSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF-G 265
SL +A+ F E LDG + Y+C CK+ V A KQ+++ ++P +L I LKRF G
Sbjct: 266 DSLHKALVHFTATEQLDGGERQYQCQRCKQKVKALKQLTVHKAPYVLTIHLKRFGAHDPG 325
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KIDK + F + L F+ S + +Y L+G +VH+G+S SGHYY +++ + G WY
Sbjct: 326 QKIDKKVHFGPTMDLKPFVS-GSYEENLKYTLYGVLVHAGWSTHSGHYYCFVRTSTGMWY 384
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ V + + VL +K Y+LF++R
Sbjct: 385 SLDDNRVVQVSERTVLDQKAYMLFYVR 411
>gi|414869933|tpg|DAA48490.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 973
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 132/338 (39%), Positives = 183/338 (54%), Gaps = 26/338 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL NLGNSCY N+V QCL +T PL + L+ HS C Q C C
Sbjct: 459 PFGLHNLGNSCYANAVFQCLMFTRPLTTYLLEGLHSKNCSQ-----------NGWCFMCE 507
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
EK IV + L +P I S L F G+QEDAHEFLRY IDA + C+ K
Sbjct: 508 FEKLIVEGKRRKIAL-SPTGILSHLNDIGSSFGPGKQEDAHEFLRYAIDAMQSVCM---K 563
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
RKGG +++V+ IFGG L+S++KC C S + + ++D++++I
Sbjct: 564 EARKGGVLQSAEE--------TTLVQLIFGGYLRSKIKCSRCHVSSEQCEPMLDLTVEID 615
Query: 206 NSCS-LKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
S L EA+ +F EVLDG NKY C CK A+K+++I ++PNIL I LKR++
Sbjct: 616 GDISSLGEALVRFTSTEVLDGENKYHCSRCKSYERAKKKLTIEEAPNILTIALKRYQSGK 675
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIG 322
GKI KAI F E L L+ +M + D P Y L+ +VH + SGHY Y+KD G
Sbjct: 676 FGKISKAIRFPETLNLARYMNPDTDDISPVYSLYAVVVHHDVMNAAFSGHYVCYVKDTQG 735
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSA 360
+W+ +DS V +L V+S+ Y+L + R + R S+
Sbjct: 736 KWFKADDSQVKPVSLDNVMSKCAYMLLYARCSPRAPSS 773
>gi|379030604|ref|NP_001243790.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 20 [Homo
sapiens]
gi|449061960|sp|D6RJB6.1|U17LK_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
20
Length = 530
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 186/328 (56%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKGCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRAL------HNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE L+G N Y C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY
Sbjct: 291 IAKNVQYPECLDMQPYMSQPNTGPL-VYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ S++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTASSITSVLSQQAYVLFYIQKSE 377
>gi|334191675|ref|NP_001229255.1| ubiquitin specific peptidase 17-like family member 25 [Homo
sapiens]
gi|334191677|ref|NP_001229257.1| ubiquitin specific peptidase 17-like family member 26 [Homo
sapiens]
gi|334191681|ref|NP_001229259.1| ubiquitin specific peptidase 17-like family member 27 [Homo
sapiens]
gi|334191683|ref|NP_001229260.1| ubiquitin specific peptidase 17-like family member 28 [Homo
sapiens]
gi|334191685|ref|NP_001229261.1| ubiquitin specific peptidase 17-like family member 29 [Homo
sapiens]
gi|337756779|ref|NP_001229256.1| ubiquitin specific peptidase 17-like family member 24 [Homo
sapiens]
gi|379030622|ref|NP_001243796.1| ubiquitin specific peptidase 17-like family member 30 [Homo
sapiens]
gi|187663978|sp|Q0WX57.2|U17LO_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
24; AltName: Full=Deubiquitinating enzyme 17; AltName:
Full=Ubiquitin thioesterase 17; AltName:
Full=Ubiquitin-specific-processing protease 17
Length = 530
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 186/328 (56%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKGCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRALH------NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE L+G N Y C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY
Sbjct: 291 IAKNVQYPECLDMQPYMSQPNTGPL-VYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ S++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTASSITSVLSQQAYVLFYIQKSE 377
>gi|302142802|emb|CBI20097.3| unnamed protein product [Vitis vinifera]
Length = 915
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 186/327 (56%), Gaps = 26/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+CYLNSVLQCLTYT PLA + +H + C+ + G C C ++
Sbjct: 109 GLENLGNTCYLNSVLQCLTYTEPLAAYLQSGKHQNSCR-IAG----------FCALCAIQ 157
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
K + R+L + P + S LR + +F+ RQEDAHE++ ++++ H CL
Sbjct: 158 KHVSRALQSTGRILVPKDLVSNLRCISRNFRNARQEDAHEYMVHLLETMHKCCL------ 211
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G S E S+V +IFGG L+SQVKC+ C SNK D +D+SL+I +
Sbjct: 212 -PSGVPSESPSAYE-----KSLVHKIFGGLLRSQVKCMQCSYCSNKFDPFLDLSLEIFKA 265
Query: 208 CSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF-G 265
SL +A+ F E LDG + Y+C CK+ V A KQ+++ ++P +L I LKRF G
Sbjct: 266 DSLHKALVHFTATEQLDGGERQYQCQRCKQKVKALKQLTVHKAPYVLTIHLKRFGAHDPG 325
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KIDK + F + L F+ S + +Y L+G +VH+G+S SGHYY +++ + G WY
Sbjct: 326 QKIDKKVHFGPTMDLKPFVS-GSYEENLKYTLYGVLVHAGWSTHSGHYYCFVRTSTGMWY 384
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ V + + VL +K Y+LF++R
Sbjct: 385 SLDDNRVVQVSERTVLDQKAYMLFYVR 411
>gi|334191679|ref|NP_001229258.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 5 [Homo
sapiens]
gi|187663984|sp|A8MUK1.2|U17L5_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
5; AltName: Full=Deubiquitinating enzyme 17-like protein
5; AltName: Full=Ubiquitin thioesterase 17-like protein
5; AltName: Full=Ubiquitin-specific-processing protease
17-like protein 5
Length = 530
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 186/328 (56%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKGCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRALH------NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE L+G N Y C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVQQALEQLAKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY
Sbjct: 291 IAKNVQYPECLDMQPYMSQPNTGPL-VYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ S++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTASSITSVLSQQAYVLFYIQKSE 377
>gi|359495422|ref|XP_003634989.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Vitis
vinifera]
Length = 997
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 185/327 (56%), Gaps = 26/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNSVLQCLTYT PLA + +H + C + G C C ++
Sbjct: 108 GLENLGNTCFLNSVLQCLTYTEPLAAYLQSGKHQNSC-HIAG----------FCALCAIQ 156
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
K + R+L + AP + S LR + +F+ RQEDAHE++ +++ H CL
Sbjct: 157 KHVSRALQSTGRILAPKDLVSNLRCISRNFRNARQEDAHEYMVNLLETMHKCCL------ 210
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G S E S+V +IFGG L+SQVKC+ C SNK D +D+SL+I +
Sbjct: 211 -PSGVPSESPSAYE-----KSLVHKIFGGLLRSQVKCMQCSYCSNKFDPFLDLSLEIFKA 264
Query: 208 CSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF-G 265
SL +A+ F E LDG + Y+C CK+ V A KQ+++ ++P +L I LKRF G
Sbjct: 265 DSLHKALMHFTATEQLDGGERQYQCQRCKQKVKALKQLTVHKAPYVLTIHLKRFGAHDPG 324
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KIDK + F + L F+ S + +Y L+G +VH+G+S SGHYY +++ + G WY
Sbjct: 325 QKIDKKVHFGPTMDLKPFVS-GSYEENLKYTLYGVLVHAGWSTHSGHYYCFVRTSTGMWY 383
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ V + + VL +K Y+LF++R
Sbjct: 384 SLDDNRVVQVSERTVLDQKAYMLFYVR 410
>gi|402912553|ref|XP_003918821.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 529
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 185/328 (56%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS LC R + C C +E
Sbjct: 81 GLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQLC-----------HRHKCCMLCTME 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL +++DA CL
Sbjct: 130 AHITRAL------HCPGHVIQPSQALAAGFHRGKQEDAHEFLMFIVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQADHDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+K+A+++ +PE L+G N Y C C + A K ++ S +L++ LKRF + G K
Sbjct: 231 QSVKQALEQVVKPEELNGENAYHCGLCLQKAPASKTFTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + +M + + P Y L+ +VH+G+S +GHY +Y+K G+WY
Sbjct: 291 LAKNVQYPECLDIQPYMSQQNTGPL-VYVLYAVLVHAGWSCHNGHYLSYVKAPGGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ ++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTACSIASVLSQQAYVLFYIQKSE 377
>gi|19075305|ref|NP_587805.1| ubiquitin C-terminal hydrolase Ubp16 [Schizosaccharomyces pombe
972h-]
gi|74626856|sp|O74442.1|UBP16_SCHPO RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase 16;
AltName: Full=Deubiquitinating enzyme 16; AltName:
Full=Ubiquitin thioesterase 16; AltName:
Full=Ubiquitin-specific-processing protease 16
gi|3560166|emb|CAA20678.1| ubiquitin C-terminal hydrolase Ubp16 [Schizosaccharomyces pombe]
Length = 457
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 130/333 (39%), Positives = 185/333 (55%), Gaps = 38/333 (11%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++NSVLQ +T TPPL + L QHS C R C C +E
Sbjct: 126 GLVNLGNTCFMNSVLQLMTQTPPLVQYLLSGQHSLSC------------RMNACVLCRME 173
Query: 88 KRIVRSLSVDLTLDA----PAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
+ + R+ T A P+ IQS L++ + HF+ RQEDAHEF+RY++DA +CL+
Sbjct: 174 QHVARAYPNKGTKRASAFKPSGIQSMLKVISSHFRPYRQEDAHEFMRYLVDAWQKSCLQN 233
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
K + + +SVV IFGG L+ Q+ C C SN ++D+S+D
Sbjct: 234 HK-------------NLDHPSRETSVVHRIFGGYLRQQILCSVCKKPSNTYQALLDLSVD 280
Query: 204 ILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR--FE 261
S SL ++++ F E L NKY+C+NCK+LV A KQM+I ++PNIL I KR F
Sbjct: 281 AKGS-SLADSLKHFVHAEKLTKQNKYRCENCKQLVDASKQMTIYRAPNILTIHFKRFTFN 339
Query: 262 GIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPE--YKLFGTIVHSGFSPDSGHYYAYIKD 319
G KI K I++ E L +M DP Y+L G +VH+G S SGHYY++ K
Sbjct: 340 GFQSSKISKQISYPESFNLGPYM----SDPNCSCWYELIGVLVHAGGSTRSGHYYSFCKS 395
Query: 320 AIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+ G W +D +VS S++ VL+++ YIL + R
Sbjct: 396 SNGVWLKFDDDFVSNSSIDRVLNQQAYILQYKR 428
>gi|37778800|gb|AAO38845.1| deubiquitinating enzyme 3 [Homo sapiens]
Length = 530
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 186/328 (56%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKGCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRAL------HNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE L+G N Y C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY
Sbjct: 291 IAKNVQYPECLDMQPYMSQPNTGPL-VYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ S++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTASSIISVLSQQAYVLFYIQKSE 377
>gi|225459111|ref|XP_002283885.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Vitis
vinifera]
Length = 1213
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 126/334 (37%), Positives = 192/334 (57%), Gaps = 27/334 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N+VLQCL +TPPL ++ L+ HS C +K C C
Sbjct: 648 PCGLMNCGNSCYANAVLQCLAFTPPLTSYFLQGLHSKSCL-----------KKEWCFTCE 696
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
E I+++ + L +P I S +R H G++EDAHEFLRY IDA + CL+
Sbjct: 697 FESLILKAKEGNSPL-SPLGILSQIRNIGSHLGNGKEEDAHEFLRYAIDAMQSVCLK--- 752
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
+ G ++ G ET S++ FGG L+S++KC+ C +S + + +MD++++I
Sbjct: 753 ---EAGVNASGSLEEET-----SLIGLTFGGYLRSKIKCMKCHGKSERHERMMDLTVEIE 804
Query: 206 NSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
+L+EA+ KF E+LDG NKY+C CK A+K++++ ++PNIL I LKRF+
Sbjct: 805 GDIGTLEEALHKFTSTEILDGENKYQCSRCKSYEKAKKKLTVSEAPNILTIALKRFQSGK 864
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIG 322
GK++K+I F E+L L+ FM S D P Y+L+ +VH + SGHY Y+K+
Sbjct: 865 FGKLNKSIRFPEILDLAPFMSGTS-DKSPIYRLYAVVVHLDIMNAAFSGHYVCYVKNIQN 923
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
+W+ +DS V L+ VL++ Y+L + R + R
Sbjct: 924 KWFKIDDSTVKPVELERVLTKGAYMLLYARCSPR 957
>gi|33333162|gb|AAQ11742.1| deubiquitinating enzyme DUB2 [Homo sapiens]
Length = 530
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 186/328 (56%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKGCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRALH------NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE L+G N Y C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY
Sbjct: 291 IAKNVQYPECLDMQPYMSQQNTGPL-VYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ S++ VL+++ Y+LF+I+ ++
Sbjct: 350 DDAEVTASSITPVLTQQAYVLFYIQKSE 377
>gi|378925638|ref|NP_001243786.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 17 [Homo
sapiens]
gi|449061957|sp|D6RBQ6.1|U17LH_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
17
Length = 530
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 186/328 (56%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKGCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRALH------NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE L+G N Y C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY
Sbjct: 291 IAKNVQYPECLDMQPYMSQQNTGPL-VYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ +++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTAASITSVLSQQAYVLFYIQKSE 377
>gi|147776521|emb|CAN74012.1| hypothetical protein VITISV_003549 [Vitis vinifera]
Length = 1225
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 126/334 (37%), Positives = 192/334 (57%), Gaps = 27/334 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N+VLQCL +TPPL ++ L+ HS C +K C C
Sbjct: 660 PCGLMNCGNSCYANAVLQCLAFTPPLTSYFLQGLHSKSCL-----------KKEWCFTCE 708
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
E I+++ + L +P I S +R H G++EDAHEFLRY IDA + CL+
Sbjct: 709 FESLILKAKEGNSPL-SPLGILSQIRNIGSHLGNGKEEDAHEFLRYAIDAMQSVCLK--- 764
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
+ G ++ G ET S++ FGG L+S++KC+ C +S + + +MD++++I
Sbjct: 765 ---EAGVNASGSLEEET-----SLIGLTFGGYLRSKIKCMKCHGKSERHERMMDLTVEIE 816
Query: 206 NSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
+L+EA+ KF E+LDG NKY+C CK A+K++++ ++PNIL I LKRF+
Sbjct: 817 GDIGTLEEALHKFTSTEILDGENKYQCSRCKSYEKAKKKLTVSEAPNILTIALKRFQSGK 876
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIG 322
GK++K+I F E+L L+ FM S D P Y+L+ +VH + SGHY Y+K+
Sbjct: 877 FGKLNKSIRFPEILDLAPFMSGTS-DKSPIYRLYAVVVHLDIMNAAFSGHYVCYVKNIQN 935
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
+W+ +DS V L+ VL++ Y+L + R + R
Sbjct: 936 KWFKIDDSTVKPVELERVLTKGAYMLLYARCSPR 969
>gi|393246455|gb|EJD53964.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
Length = 662
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 182/333 (54%), Gaps = 40/333 (12%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECP----- 82
GL N GN+C+LNS LQCL +TPPL + L R+CP
Sbjct: 109 GLYNQGNTCFLNSALQCLLHTPPLLHAVL-------------------NHPRDCPAQDDG 149
Query: 83 FCIL--EKRIVR-SLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNT 139
FCI +R+ + S V +P+ I L A+ + GRQEDAHEFLR++IDA
Sbjct: 150 FCITCSFRRVAQDSFKVKGNAFSPSPILHNLHKIAKSLRRGRQEDAHEFLRFLIDAMQKA 209
Query: 140 CLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMD 199
CL G + ++ V +FGG L+S+V+C +C S+ D I+D
Sbjct: 210 CLH------------GQPKKVDPAVAEATWVSRVFGGKLRSRVRCCSCNHPSDTFDSILD 257
Query: 200 ISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
+SLDI N+ S+ +A++ F + L G +KYKC+ CKK V+A KQ +I +P L + LKR
Sbjct: 258 LSLDIQNASSVHQALKHFVAIDHLRGADKYKCEKCKKPVNAEKQFTIDSAPLALTVHLKR 317
Query: 260 FEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKD 319
F FG K+ + ++E L L+ M K +++ P+YKL+G I H+G P+SGHYYA+ K
Sbjct: 318 FTP-FGRKLAHVVQYKEHLSLAGAMSKDAKEQSPQYKLYGVICHAGSGPNSGHYYAFTKG 376
Query: 320 AIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
GRWY ND VS+ T + + Y+LF++R
Sbjct: 377 PNGRWYEMNDDAVSLQTRPPLDLKSAYMLFYLR 409
>gi|378925636|ref|NP_001243784.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 13 [Homo
sapiens]
gi|449061955|sp|C9JLJ4.1|U17LD_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
13
Length = 530
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 186/328 (56%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKGCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRALH------NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHPSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE L+G N Y C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY
Sbjct: 291 IAKNVQYPECLDMQPYMSQQNTGPLV-YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ +++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTAASITSVLSQQAYVLFYIQKSE 377
>gi|332244679|ref|XP_003271501.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like isoform 1 [Nomascus leucogenys]
gi|332267671|ref|XP_003282805.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Nomascus leucogenys]
gi|441611210|ref|XP_004088001.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like isoform 2 [Nomascus leucogenys]
Length = 529
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 185/328 (56%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKCCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRAL------HRPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMRKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDPHSKDTTLIHQIFGGYWRSQIKCLHCQGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+K+A+++ +PE L+G N Y C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVKQALEQLVKPEELNGENAYHCGLCLQKAPASKTLTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY
Sbjct: 291 LAKNVQYPECLDMQPYMSQQNTGPL-VYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ S + VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTASGITSVLSQQAYVLFYIQKSE 377
>gi|332244521|ref|XP_003271421.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Nomascus leucogenys]
Length = 529
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 185/328 (56%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKCCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRAL------HRPGDVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMRKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDPHSKDTTLIHQIFGGYWRSQIKCLHCQGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+K+A+++ +PE L+G N Y C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVKQALEQLVKPEELNGENAYHCGLCLQKAPASKTLTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY
Sbjct: 291 LAKNVQYPECLDMQPYMSQQNTGPL-VYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ S + VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTASGITSVLSQQAYVLFYIQKSE 377
>gi|168040440|ref|XP_001772702.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675927|gb|EDQ62416.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 428
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 129/331 (38%), Positives = 186/331 (56%), Gaps = 27/331 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSC+ N VLQCLTYT PL + L H +CK R C C
Sbjct: 121 PCGLVNCGNSCFANVVLQCLTYTRPLTAYLLNDSHREVCK-----------RNDWCFMCE 169
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
L+ VR + +P +I S +R H G+QEDAHEF+R+ ID+ +TCL
Sbjct: 170 LQSH-VRKVRETQNPFSPIRILSRIRSIGSHLGYGKQEDAHEFMRFAIDSMQSTCL---- 224
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQV-KCLACGAESNKVDEIMDISLDI 204
GG + ++++ IFGG LQSQV KC+ C ESN+ + +MD++++I
Sbjct: 225 ------DEFGGEKAVDPATQETTLIHHIFGGHLQSQVVKCMECHHESNRYESMMDLAVEI 278
Query: 205 LNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI 263
SL++A+ +F E+LDG+NKYKCD C V A K++++ ++PNIL I LKRF+
Sbjct: 279 HGVVESLEDAIAQFTAAEMLDGDNKYKCDRCNAYVRAGKRLTVHEAPNILTIALKRFQSG 338
Query: 264 FGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYIKDAI 321
GK++K + F + L +S +M + D P Y L+ +VH S GHY Y+KD+
Sbjct: 339 KFGKLNKRVTFPKTLDMSPYM-SGTNDDSPLYGLYAVVVHVDLLNASFFGHYICYVKDSN 397
Query: 322 GRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
G WY +DS V L++VL++K Y+LF+ R
Sbjct: 398 GVWYKIDDSKVKEVELEKVLAQKAYMLFYTR 428
>gi|356498842|ref|XP_003518257.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
max]
Length = 1036
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/357 (36%), Positives = 197/357 (55%), Gaps = 29/357 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N+VLQCL TPPL + L+ HS C K+ C C
Sbjct: 505 PFGLINCGNSCYANAVLQCLAVTPPLTAYLLQGLHSKSCAN-----------KKWCFTCE 553
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
E I++S + + +P I S L+ GR+EDAHEFLR V++ + CL
Sbjct: 554 FESLILKSKDTNSPM-SPLGILSQLQNIGSQLGNGREEDAHEFLRLVVETMQSVCLM--- 609
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
G +++ ++++ FGG LQS++KC+ CG +S + + +MD++++I
Sbjct: 610 --------ESGDNMSDSLKEETNLMGLTFGGYLQSKIKCMKCGGKSERQERMMDLTVEIE 661
Query: 206 NS-CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
+L+EA+++F E LDG NKY+C CK A+K+M++L++PN+L I LKRF+
Sbjct: 662 GEIATLEEALRQFTSAETLDGENKYRCVRCKSYEKAKKKMTVLEAPNVLTIALKRFQSGK 721
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIG 322
GK++K I F E+L L+ FM S P Y+L+G +VH + SGHY Y+K+
Sbjct: 722 FGKLNKPIRFPEILDLAPFMSGTSD--LPIYRLYGVVVHLDIMNAAFSGHYVCYVKNFQS 779
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR-PVSANGTFASNGVKSHENGKEA 378
RW+ +DS V+ L+ VL++ Y+LF+ R + R P + S+ K NGK A
Sbjct: 780 RWFKVDDSVVTAVELESVLAKGAYMLFYSRCSPRAPRLIRNSIVSSDSKWKLNGKTA 836
>gi|187663985|sp|Q6QN14.2|U17L6_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
6; AltName: Full=Deubiquitinating enzyme 17-like protein
6; AltName: Full=Ubiquitin thioesterase 17-like protein
6; AltName: Full=Ubiquitin-specific-processing protease
17-like protein 6
Length = 398
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 188/336 (55%), Gaps = 31/336 (9%)
Query: 20 RKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKR 79
R+ GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R +
Sbjct: 73 RRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHK 121
Query: 80 ECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNT 139
C C ++ I R+L P + + A F G+QEDAHEFL + +DA
Sbjct: 122 GCMLCTMQAHITRAL------HNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKA 175
Query: 140 CLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMD 199
CL G + + ++++ +IFGG +SQ+KCL C S+ D +D
Sbjct: 176 CL-------------PGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLD 222
Query: 200 ISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
I+LDI + S+++A+++ +PE L+G N Y C C + A K +++ S +L++ LKR
Sbjct: 223 IALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKR 282
Query: 260 FEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKD 319
F + G KI K + + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K
Sbjct: 283 FSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPL-VYVLYAVLVHAGWSCHNGHYFSYVKA 341
Query: 320 AIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQ 355
G+WY +D+ V+ S++ VLS++ Y+LF+I+ ++
Sbjct: 342 QEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSE 377
>gi|342321481|gb|EGU13414.1| Ubiquitin carboxyl-terminal hydrolase [Rhodotorula glutinis ATCC
204091]
Length = 656
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/332 (39%), Positives = 181/332 (54%), Gaps = 34/332 (10%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSS----LCKQLTGDSALDAERKRECPF 83
GL NLGN+C+LNS LQ L +TPPL + QH S CKQ +K C
Sbjct: 134 GLNNLGNTCFLNSALQVLLHTPPLLRYLESSQHPSENNCKCKQ----------QKDFCMI 183
Query: 84 CILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
C + S + +P + L+ A+H + GRQED+HEFLR+ IDA L
Sbjct: 184 CTMRACARVSFTGRQRSYSPNPVVRNLKKIAKHMRLGRQEDSHEFLRFSIDAMQAAALYG 243
Query: 144 K--KLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDIS 201
K KL +K ET + V +IFGG L+S+V CLACG S+ D I+D+S
Sbjct: 244 KSPKLEQKIK---------ET-----TFVHQIFGGRLRSRVHCLACGHNSDTFDSILDLS 289
Query: 202 LDILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF 260
LD+ N +LK+A+ F + + L G NKYKC+ CKKLV+A K +I +P +L + LKRF
Sbjct: 290 LDLGNRANTLKDALDNFVRIDKLSGQNKYKCEKCKKLVNAEKYFAIEDAPLVLTVHLKRF 349
Query: 261 EGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDA 320
G KI + + E L L +M DP Y+L+G I+HSG P SGHY +Y++ +
Sbjct: 350 SPT-GRKITGQLRYPETLHLGPYMSNPKVDP--SYRLYGIILHSGGGPHSGHYTSYVRSS 406
Query: 321 IGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
G+W+ ND YVS + + Y+LF++R
Sbjct: 407 SGKWHDMNDDYVSSLSHPPLSDRDAYVLFYVR 438
>gi|402912282|ref|XP_003918703.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
gi|402912555|ref|XP_003918822.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 529
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 185/328 (56%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS LC R + C C +E
Sbjct: 81 GLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQLC-----------HRHKCCMLCTME 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL +++DA CL
Sbjct: 130 AHITRAL------HCPGHVIQPSQALAAGFHRGKQEDAHEFLMFIVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+K+A+++ +PE L+G N Y C C + A K ++ S +L++ LKRF + G K
Sbjct: 231 QSVKQALEQVVKPEELNGENAYHCGLCLQKAPASKTFTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + +M + + P Y L+ +VH+G+S +GHY +Y+K G+WY
Sbjct: 291 LAKNVQYPECLDIQPYMSQQNTGPL-VYVLYAVLVHAGWSCHNGHYLSYVKAPGGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ ++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTACSIASVLSQQAYVLFYIQKSE 377
>gi|302142049|emb|CBI19252.3| unnamed protein product [Vitis vinifera]
Length = 841
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/334 (37%), Positives = 192/334 (57%), Gaps = 27/334 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N+VLQCL +TPPL ++ L+ HS C +K C C
Sbjct: 470 PCGLMNCGNSCYANAVLQCLAFTPPLTSYFLQGLHSKSCL-----------KKEWCFTCE 518
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
E I+++ + L +P I S +R H G++EDAHEFLRY IDA + CL+
Sbjct: 519 FESLILKAKEGNSPL-SPLGILSQIRNIGSHLGNGKEEDAHEFLRYAIDAMQSVCLK--- 574
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
+ G ++ G ET S++ FGG L+S++KC+ C +S + + +MD++++I
Sbjct: 575 ---EAGVNASGSLEEET-----SLIGLTFGGYLRSKIKCMKCHGKSERHERMMDLTVEIE 626
Query: 206 NSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
+L+EA+ KF E+LDG NKY+C CK A+K++++ ++PNIL I LKRF+
Sbjct: 627 GDIGTLEEALHKFTSTEILDGENKYQCSRCKSYEKAKKKLTVSEAPNILTIALKRFQSGK 686
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIG 322
GK++K+I F E+L L+ FM S D P Y+L+ +VH + SGHY Y+K+
Sbjct: 687 FGKLNKSIRFPEILDLAPFMSGTS-DKSPIYRLYAVVVHLDIMNAAFSGHYVCYVKNIQN 745
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
+W+ +DS V L+ VL++ Y+L + R + R
Sbjct: 746 KWFKIDDSTVKPVELERVLTKGAYMLLYARCSPR 779
>gi|50725209|dbj|BAD33960.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
gi|222641732|gb|EEE69864.1| hypothetical protein OsJ_29670 [Oryza sativa Japonica Group]
Length = 940
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/336 (38%), Positives = 192/336 (57%), Gaps = 18/336 (5%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSAL--DAERKRECPF 83
P GL NLGNSCY N+VLQCL +T PL + + HS C + + + +K C
Sbjct: 381 PFGLVNLGNSCYANAVLQCLAFTRPLTAYLTEGLHSRNCNLILSQNCVTYHGSKKEWCFM 440
Query: 84 CILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
C EK I+ L +P I S LR F GR+EDAHEFLRY ID + ++
Sbjct: 441 CEFEKLILEGRRGKSHL-SPTGILSHLRDIGSSFGPGREEDAHEFLRYAIDTMQSASMKE 499
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
K +G G E +++V+ IFGG L+S++KC C S + + I+D++++
Sbjct: 500 AK-------KNGVYGLPEE----TTLVQLIFGGYLRSKIKCTMCQGSSEQCERILDLTVE 548
Query: 204 ILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEG 262
I +L+EA+ +F E+LDG+N+Y C CK A+K+++I ++PNIL I LKR++
Sbjct: 549 IDGDINTLEEALHRFTSTEILDGDNRYNCSRCKSYERAKKKLTISEAPNILTIALKRYQS 608
Query: 263 IFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDA 320
GKI+KA+ F E L LS++M A D P Y+L+ +VH + SGHY Y+KD
Sbjct: 609 GNFGKINKAVRFTEYLNLSNYMSTA-DDISPVYQLYAVVVHHDVMNAAFSGHYVCYVKDT 667
Query: 321 IGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
G+W+ +DS V +L++VLS+ Y+LF+ R + R
Sbjct: 668 QGKWHKMDDSQVKPVSLEKVLSKCAYMLFYARCSPR 703
>gi|378925630|ref|NP_001243781.1| ubiquitin specific peptidase 17-like family member 10 [Homo
sapiens]
gi|449061953|sp|C9JJH3.1|U17LA_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
10
Length = 530
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/344 (34%), Positives = 189/344 (54%), Gaps = 41/344 (11%)
Query: 22 RGGPPL----------GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDS 71
R PPL GL+N+GN+CY+N+ LQCLTY PPLAN+ L +HS C
Sbjct: 65 REKPPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYKPPLANYMLFREHSQTC------- 117
Query: 72 ALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRY 131
R + C C ++ I R+L + P + + A F G+QEDAHEFL +
Sbjct: 118 ----HRHKGCMLCTMQAHITRALHI------PGHVIQPSQALAAGFHRGKQEDAHEFLMF 167
Query: 132 VIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAES 191
+DA CL G + + ++++ +IFGG +SQ+KCL C S
Sbjct: 168 TVDAMRKACL-------------PGHKQVDRHSKDTTLIHQIFGGYWRSQIKCLHCHGIS 214
Query: 192 NKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPN 251
+ D +DI+LDI + S+++A+++ +PE L+G N Y C C + A K +++ S
Sbjct: 215 DTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHNSAK 274
Query: 252 ILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
+L++ LKRF + G KI K + + E L + +M + + P Y L+ +VH+G+S +G
Sbjct: 275 VLILVLKRFPDVTGNKIAKNVQYPECLDMQPYMSQQNTGPL-VYVLYAVLVHAGWSCHNG 333
Query: 312 HYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQ 355
HY +Y+K G+WY +D+ V+ S++ VLS++ Y+LF+I+ ++
Sbjct: 334 HYSSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSE 377
>gi|302797124|ref|XP_002980323.1| hypothetical protein SELMODRAFT_420048 [Selaginella moellendorffii]
gi|300151939|gb|EFJ18583.1| hypothetical protein SELMODRAFT_420048 [Selaginella moellendorffii]
Length = 924
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/352 (36%), Positives = 197/352 (55%), Gaps = 37/352 (10%)
Query: 25 PPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFC 84
PP GL N GNSC+ N +LQCL+YT PLA + L+ H + C+ R C C
Sbjct: 226 PPCGLINCGNSCFANVILQCLSYTRPLAAYLLEGSHRAECR-----------RNDWCFMC 274
Query: 85 ILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLK 144
L+ +R + ++ +P +I S LR H GRQEDAHEF+R+ +D+ + CL
Sbjct: 275 ELQDHALRVFNSEVPF-SPFRILSRLRDIGNHLGYGRQEDAHEFMRFAVDSMQSICL--- 330
Query: 145 KLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI 204
GG ++ + +++++ IFGG LQSQVKC+ CG ESN+ + +MD++++I
Sbjct: 331 -------DQFGGEKQVDSRSQETTLIQYIFGGHLQSQVKCMQCGHESNRYENMMDLAVEI 383
Query: 205 LNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVS----ARKQMSILQSPNILVIQLKR 259
+ SL++ + +F PE LDG NKYKCD + + + K++S+ ++PNIL I LKR
Sbjct: 384 QGAVESLEDGLAQFTAPEWLDGENKYKCDRWCDVWAIPLFSCKRLSVYEAPNILTIALKR 443
Query: 260 FEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYI 317
F+ GK++K + F E L +S +M P P Y+L+ +VH S GHY Y+
Sbjct: 444 FQSGKFGKLNKRVTFPEALNISPYMSGEGDKP-PLYRLYAVVVHVDMLNASFFGHYICYV 502
Query: 318 KDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR--PVSANGTFASN 367
+D G WY V ++V+S+K Y+L + R++ R P +A G+ AS
Sbjct: 503 RDMTGTWY-----KVKEVDTEKVMSQKAYMLMYSRSSARPGPETAVGSVAST 549
>gi|45386059|gb|AAS59847.1| deubiquitinating enzyme DUB4 [Homo sapiens]
Length = 398
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 186/328 (56%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKGCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRALH------NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE L+G N Y C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY
Sbjct: 291 IAKNVQYPECLDMQPYMSQQNTGPL-VYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ S++ VL+++ Y+LF+I+ ++
Sbjct: 350 DDAEVTASSITSVLTQQAYVLFYIQKSE 377
>gi|356510092|ref|XP_003523774.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
max]
Length = 1063
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/334 (36%), Positives = 187/334 (55%), Gaps = 27/334 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N+VLQCL +TPPL + L+ HS C K+ C C
Sbjct: 602 PFGLINCGNSCYANAVLQCLAFTPPLTAYLLQGSHSKSCAN-----------KKWCFTCE 650
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
E+ I++S + +P I S L+ GR+EDAHEFLR+VID + CL
Sbjct: 651 FERLILKSKDTKSAV-SPMGIISHLQNIGSQLANGREEDAHEFLRHVIDTMQSVCLMEAG 709
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
+ G ++ ++++ + FGG L S++KC+ CG +S + + +MD++++I
Sbjct: 710 VNALG-----------SLEEDTTLMGQTFGGYLLSKIKCMRCGGKSERQERMMDLTVEIE 758
Query: 206 NS-CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
+L EA+++F E LDG NKY C CK A+K++++ ++PN+L + LKRF+
Sbjct: 759 GEITTLVEALRRFTSTETLDGENKYHCVRCKSYEKAKKKLTVSEAPNVLTVALKRFQSGK 818
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIG 322
GK++K I F E+L L+ FM S D P Y+L+G +VH + SGHY Y+K+
Sbjct: 819 FGKLNKPIQFPEILNLAPFMSGTS-DKSPIYRLYGVVVHLDIMNAAFSGHYVCYVKNIQN 877
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
+W+ +DS V+ L VL++ Y+LF+ R + R
Sbjct: 878 KWFKVDDSVVTAVELDRVLTKGAYMLFYARCSPR 911
>gi|297609602|ref|NP_001063411.2| Os09g0464400 [Oryza sativa Japonica Group]
gi|255678959|dbj|BAF25325.2| Os09g0464400 [Oryza sativa Japonica Group]
Length = 918
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 129/336 (38%), Positives = 192/336 (57%), Gaps = 18/336 (5%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSAL--DAERKRECPF 83
P GL NLGNSCY N+VLQCL +T PL + + HS C + + + +K C
Sbjct: 381 PFGLVNLGNSCYANAVLQCLAFTRPLTAYLTEGLHSRNCNLILSQNCVTYHGSKKEWCFM 440
Query: 84 CILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
C EK I+ L +P I S LR F GR+EDAHEFLRY ID + ++
Sbjct: 441 CEFEKLILEGRRGKSHL-SPTGILSHLRDIGSSFGPGREEDAHEFLRYAIDTMQSASMKE 499
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
K +G G E +++V+ IFGG L+S++KC C S + + I+D++++
Sbjct: 500 AK-------KNGVYGLPEE----TTLVQLIFGGYLRSKIKCTMCQGSSEQCERILDLTVE 548
Query: 204 ILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEG 262
I +L+EA+ +F E+LDG+N+Y C CK A+K+++I ++PNIL I LKR++
Sbjct: 549 IDGDINTLEEALHRFTSTEILDGDNRYNCSRCKSYERAKKKLTISEAPNILTIALKRYQS 608
Query: 263 IFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDA 320
GKI+KA+ F E L LS++M A D P Y+L+ +VH + SGHY Y+KD
Sbjct: 609 GNFGKINKAVRFTEYLNLSNYMSTA-DDISPVYQLYAVVVHHDVMNAAFSGHYVCYVKDT 667
Query: 321 IGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
G+W+ +DS V +L++VLS+ Y+LF+ R + R
Sbjct: 668 QGKWHKMDDSQVKPVSLEKVLSKCAYMLFYARCSPR 703
>gi|302815104|ref|XP_002989234.1| hypothetical protein SELMODRAFT_1651 [Selaginella moellendorffii]
gi|300142977|gb|EFJ09672.1| hypothetical protein SELMODRAFT_1651 [Selaginella moellendorffii]
Length = 309
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 134/331 (40%), Positives = 183/331 (55%), Gaps = 32/331 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNSVLQCLTYT PLA F QH LCK S C C LE
Sbjct: 3 GLTNLGNTCFLNSVLQCLTYTQPLAEFLKSGQHKLLCK----SSGF-------CAMCALE 51
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRI----FAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
+ +L + AP + S + + F+ RQEDAHEFLRY+++A CL
Sbjct: 52 GHVRNALQSWGKVIAPNHMISRVNYSNAGISRAFQPWRQEDAHEFLRYLMEALQKDCLPS 111
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
K + +++ +IFGG L+SQVKC C S VD +D+SLD
Sbjct: 112 KT-------------PMNSPEQEKTLLYKIFGGRLRSQVKCSNCLERSETVDPFLDLSLD 158
Query: 204 ILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE-- 261
I + SL +A+ F E+LDG+NKY C+ CKK V A K+ +I +PN+L +Q KRF
Sbjct: 159 ITRADSLGKALAWFTANEILDGDNKYHCEKCKKKVRAIKRFTIETAPNVLTVQFKRFSST 218
Query: 262 GIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI 321
G+ G KIDK + F L ++ FM A Y L+G +VH+G+S SGHYY +++ +
Sbjct: 219 GLHGQKIDKKVHFGRKLDITPFMSNARDG--AVYDLYGVLVHAGWSTRSGHYYCFVRTSS 276
Query: 322 GRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
W+ +DS V + Q VL++K YILF+IR
Sbjct: 277 DMWHVLDDSRVQQLSEQTVLNQKAYILFYIR 307
>gi|302765142|ref|XP_002965992.1| hypothetical protein SELMODRAFT_1903 [Selaginella moellendorffii]
gi|300166806|gb|EFJ33412.1| hypothetical protein SELMODRAFT_1903 [Selaginella moellendorffii]
Length = 309
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 134/331 (40%), Positives = 183/331 (55%), Gaps = 32/331 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNSVLQCLTYT PLA F QH LCK S C C LE
Sbjct: 3 GLTNLGNTCFLNSVLQCLTYTQPLAEFLKSGQHKLLCK----SSGF-------CAMCALE 51
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRI----FAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
+ +L + AP + S + + F+ RQEDAHEFLRY+++A CL
Sbjct: 52 GHVKNALQSWGKVIAPNHMISRVNYSNAGISRAFQPWRQEDAHEFLRYLMEALQKDCLPS 111
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
K + +++ +IFGG L+SQVKC C S VD +D+SLD
Sbjct: 112 KT-------------PMNSPEQEKTLLYKIFGGRLRSQVKCSNCLERSETVDPFLDLSLD 158
Query: 204 ILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE-- 261
I + SL +A+ F E+LDG+NKY C+ CKK V A K+ +I +PN+L +Q KRF
Sbjct: 159 ITRADSLGKALAWFTANEILDGDNKYHCEKCKKKVRAIKRFTIETAPNVLTVQFKRFSST 218
Query: 262 GIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI 321
G+ G KIDK + F L ++ FM A Y L+G +VH+G+S SGHYY +++ +
Sbjct: 219 GLHGQKIDKKVHFGRKLDITPFMSNARDG--AVYDLYGVLVHAGWSTRSGHYYCFVRTSS 276
Query: 322 GRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
W+ +DS V + Q VL++K YILF+IR
Sbjct: 277 DMWHVLDDSRVQQLSEQTVLNQKAYILFYIR 307
>gi|330840214|ref|XP_003292114.1| hypothetical protein DICPUDRAFT_156792 [Dictyostelium purpureum]
gi|325077668|gb|EGC31366.1| hypothetical protein DICPUDRAFT_156792 [Dictyostelium purpureum]
Length = 413
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 130/343 (37%), Positives = 182/343 (53%), Gaps = 37/343 (10%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N+GN+C++NSVLQCLTY+P LAN+ + +HS C K C FC +E
Sbjct: 12 GLYNIGNTCFMNSVLQCLTYSPALANYMISGEHSKNC-----------TNKSFCIFCSIE 60
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I+ S P I + A F+ GRQED+HEF +VID+ CL
Sbjct: 61 IHIIASHKATGKATTPLVIAKNIEKVAPTFRIGRQEDSHEFFCFVIDSLQKVCL------ 114
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S G + ++V+ IFGG L+SQVKC C ESN DE MD+ ++I +
Sbjct: 115 -----SKFPKGSISPRDSMTTVIGSIFGGYLRSQVKCTVCQYESNTFDEFMDLCVEINQA 169
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI--FG 265
SL + +Q F +PE+LDG N YKC C KLV A K + I SP +L +Q+KRF + +G
Sbjct: 170 NSLTKGLQNFVKPEILDGENGYKCKKCNKLVKAEKSLQIEISPPVLTVQIKRFSFLNSYG 229
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
GK +K I F + L LS +M + ++ Y L +VH G S +SGHYY Y+K + G WY
Sbjct: 230 GKDNKHIQFGQTLDLSPYMTQ--KNDYSIYDLNSVLVHLGDSANSGHYYCYVKGSNGVWY 287
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIRA-NQRPVSANGTFASN 367
+DS VS + Y +F+ + +R ++ N N
Sbjct: 288 KMDDSMVS----------QAYNVFYTKGYTERSINTNSVIPKN 320
>gi|356564905|ref|XP_003550687.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Glycine
max]
Length = 903
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 129/327 (39%), Positives = 183/327 (55%), Gaps = 26/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRNLGN+C+LNSVLQCLTYT PLA + +H + C + G C C ++
Sbjct: 99 GLRNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHKTSC-HVAG----------FCALCAIQ 147
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R+L + AP + LR + +F+ RQEDAHE++ +++ H CL
Sbjct: 148 NHVSRALQSTGRILAPEDLVGNLRCISRNFRNARQEDAHEYMVNLLECMHKCCL------ 201
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G S G E S V +IFGG L+SQVKC C SNK D +D+SL+I +
Sbjct: 202 -PSGIPSESPGAYE-----KSFVHKIFGGRLRSQVKCHQCSYCSNKFDPFLDLSLEIFKA 255
Query: 208 CSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI-FG 265
SL++A+ F E LDG K Y C CK+ V A KQ++I ++P +L I LKRF G
Sbjct: 256 DSLQKALSNFTAAEWLDGGEKEYHCQRCKQKVKALKQLTIHKAPYVLTIHLKRFHAHDTG 315
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KI K + F L L F+ S D +Y L+G +VH+G S SGHYY Y++ + WY
Sbjct: 316 QKIKKKVQFGCALDLKPFV-SGSNDGDVKYSLYGVLVHAGSSTHSGHYYCYVRTSNNMWY 374
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ VS + +EVL+++ Y+LF++R
Sbjct: 375 TLDDNRVSHVSEREVLNQQAYMLFYVR 401
>gi|296088835|emb|CBI38293.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 185/327 (56%), Gaps = 26/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNSVLQCLTYT PLA + +H + C + G C C ++
Sbjct: 108 GLENLGNTCFLNSVLQCLTYTEPLAAYLQSGKHQNSC-HIAG----------FCALCAIQ 156
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
K + R+L + AP + S LR + +F+ RQEDAHE++ +++ H CL
Sbjct: 157 KHVSRALQSTGRILAPKDLVSNLRCISRNFRNARQEDAHEYMVNLLETMHKCCL------ 210
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G S E S+V +IFGG L+SQVKC+ C SNK D +D+SL+I +
Sbjct: 211 -PSGVPSESPSAYE-----KSLVHKIFGGLLRSQVKCMQCSYCSNKFDPFLDLSLEIFKA 264
Query: 208 CSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF-G 265
SL +A+ F E LDG + Y+C CK+ V A KQ+++ ++P +L I LKRF G
Sbjct: 265 DSLHKALMHFTATEQLDGGERQYQCQRCKQKVKALKQLTVHKAPYVLTIHLKRFGAHDPG 324
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KIDK + F + L F+ S + +Y L+G +VH+G+S SGHYY +++ + G WY
Sbjct: 325 QKIDKKVHFGPTMDLKPFV-SGSYEENLKYTLYGVLVHAGWSTHSGHYYCFVRTSTGMWY 383
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ V + + VL +K Y+LF++R
Sbjct: 384 SLDDNRVVQVSERTVLDQKAYMLFYVR 410
>gi|357465295|ref|XP_003602929.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355491977|gb|AES73180.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 1116
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/334 (36%), Positives = 187/334 (55%), Gaps = 27/334 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N+GNSCY N+VLQCL +TPPL+ + ++ HS C K C C
Sbjct: 583 PFGLINIGNSCYANAVLQCLAFTPPLSAYLVQGLHSKSCSN-----------KTWCFICE 631
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
E+ I +S L +P I S L+ G++EDAHEFLR+ ID + CL
Sbjct: 632 FERLIFKSKDTKSPL-SPTGILSQLQSIGSQLGNGKEEDAHEFLRHAIDTMQSVCLM--- 687
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
G +SG T+ G + FGG L+S++KC+ CG +S + + +MD++++I
Sbjct: 688 --EAGINASGSSEEDTTLMG------QTFGGYLRSKIKCMKCGGKSERQERMMDLTVEIE 739
Query: 206 NSCS-LKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
S L EA+++F E LDG NKY C CK A+K++++ ++PNIL + LKRF+
Sbjct: 740 GEISTLAEALRRFTSTETLDGENKYHCVRCKSYQKAKKKLTVSEAPNILTVALKRFQSGK 799
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIG 322
GK++K + F E+L L+ F+ S D P Y+L+G +VH + SGHY Y+K+
Sbjct: 800 FGKLNKPVQFPEILDLAPFVSGTS-DKTPIYRLYGVVVHLDVMNASFSGHYVCYLKNIQN 858
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
+W+ +DS V+ L+ VL++ Y+LF+ R + R
Sbjct: 859 KWFKVDDSVVTAVELERVLTKGAYMLFYARCSPR 892
>gi|356556906|ref|XP_003546761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Glycine
max]
Length = 989
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 135/338 (39%), Positives = 187/338 (55%), Gaps = 32/338 (9%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N+VLQCLT T PL + L HS C K C C
Sbjct: 468 PRGLLNCGNSCYANAVLQCLTSTKPLVIYLLYRSHSKACCA-----------KDWCLMCE 516
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
LE+ I+ L + +P++I +R H G QEDAHEFLR +I + + CL
Sbjct: 517 LEQHIM-ILRENGAPLSPSRILWHMRSINCHMGEGSQEDAHEFLRLLIASMQSICLE--- 572
Query: 146 LRRKGGGSSGGGGGGETIN---GGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISL 202
G GG + ++ ++ ++ FGG LQS+VKCL C ES + + IMD++L
Sbjct: 573 ----------GLGGEKKVDPRIQETTFIQHTFGGRLQSKVKCLNCNHESERYENIMDLTL 622
Query: 203 DILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE 261
+IL SL++A+ +F PE LDG N Y+C C V ARKQ+SI ++PNIL I LKRF+
Sbjct: 623 EILGWVESLEDALTQFTSPEDLDGENMYRCGRCTSYVRARKQLSIHEAPNILTIVLKRFQ 682
Query: 262 GIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH--SGFSPDSGHYYAYIKD 319
GKI+K I F E+L + FM P P Y L+ +VH + + SGHY +Y+KD
Sbjct: 683 EGRYGKINKCITFPEMLDMIPFMTGTGDIP-PLYMLYAVVVHLDTLNASFSGHYVSYVKD 741
Query: 320 AIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
G W+ +D+ V + +V+SE YILF++R+ RP
Sbjct: 742 LQGNWFRIDDAEVQPVLINQVMSEGAYILFYMRSCPRP 779
>gi|449461409|ref|XP_004148434.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Cucumis
sativus]
Length = 1113
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 123/334 (36%), Positives = 187/334 (55%), Gaps = 27/334 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N VLQCLT+TPPL + L+ HS C ++R C C
Sbjct: 595 PSGLVNCGNSCYANVVLQCLTFTPPLTAYFLQGLHSKACA-----------KERWCFTCE 643
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
E I+ + L +P +I S LR G++EDAHEFLR ID + C +
Sbjct: 644 FESLILEAKEGKSPL-SPFRIISQLRKIGSQLVNGKEEDAHEFLRCAIDTMQSICFMEAQ 702
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
R G + ++++ FGG L S++KC C +S +++ I+D++++I
Sbjct: 703 ASRSG-----------PVEEETTLIGLTFGGYLLSKIKCTRCENKSERIERILDLTVEIS 751
Query: 206 NSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
+++EA+Q++ PE+LDG+N+Y C C V ARK++SIL++PNIL I LKRF+
Sbjct: 752 GDIETIEEALQQYTSPEILDGDNRYHCTRCNSYVKARKRLSILEAPNILTIALKRFQSGK 811
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIG 322
GK++K + F E+L L+ +M S D P Y+L+G IVH + SGHY YI++
Sbjct: 812 FGKLNKPVIFSEILDLAPYMSSRS-DKSPVYRLYGVIVHLDVMNAAFSGHYVCYIRNNQN 870
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
+W+ +DS V+ ++ VL+ Y+LF+ R + R
Sbjct: 871 KWFKVDDSTVTAMDVKNVLTRGAYMLFYARCSPR 904
>gi|402912765|ref|XP_003918915.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 400
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 116/336 (34%), Positives = 187/336 (55%), Gaps = 31/336 (9%)
Query: 20 RKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKR 79
R+ GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS LC R +
Sbjct: 73 RRPAAVGAGLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQLC-----------HRHK 121
Query: 80 ECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNT 139
C C +E I R+L P + + A F G+QEDAHEFL +++DA
Sbjct: 122 CCMLCTMEAHITRAL------HCPGHVIQPSQALAAGFHRGKQEDAHEFLMFIVDAMKKA 175
Query: 140 CLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMD 199
CL G + + ++++ +IFGG +SQ+KCL C S+ D +D
Sbjct: 176 CLP-------------GHKQVDHDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLD 222
Query: 200 ISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
I+LDI + S+K+A+++ +PE L+G N Y C C + A K ++ S +L++ LKR
Sbjct: 223 IALDIQAAQSVKQALEQVVKPEELNGENAYHCGLCLQKAPASKTFTLHTSAKVLILVLKR 282
Query: 260 FEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKD 319
F + G K+ K + + E L + +M + + P Y L+ +VH+G+S +GHY +Y+K
Sbjct: 283 FSDVTGNKLAKNVQYPECLDVQPYMSQQNTGPL-VYVLYAVLVHAGWSCHNGHYLSYVKA 341
Query: 320 AIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQ 355
G+WY +D+ V+ ++ VLS++ Y+LF+I+ ++
Sbjct: 342 PGGQWYKMDDAEVTACSIASVLSQQAYVLFYIQKSE 377
>gi|242081757|ref|XP_002445647.1| hypothetical protein SORBIDRAFT_07g023330 [Sorghum bicolor]
gi|241941997|gb|EES15142.1| hypothetical protein SORBIDRAFT_07g023330 [Sorghum bicolor]
Length = 998
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 126/338 (37%), Positives = 185/338 (54%), Gaps = 26/338 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N+GNSCY N+VLQCL +T PL + L+ HS C Q K C C
Sbjct: 464 PFGLHNVGNSCYANAVLQCLMFTRPLTTYLLEGLHSKNCSQ-----------KGWCFMCE 512
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
EK IV L +P I S L G+QEDAHEFLRY IDA + C++
Sbjct: 513 FEKLIVEGKRRKTAL-SPTGILSHLHDIGSSLGPGKQEDAHEFLRYAIDAMQSVCMK--- 568
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
+ GG +++ +++V+ IFGG L+S++KC C S + + ++D++++I
Sbjct: 569 -------EASKGGVIQSMEE-TTLVQLIFGGYLRSKIKCSRCHVSSEQCEPMLDLTVEID 620
Query: 206 NSCS-LKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
S L EA+++F EVLDG NKY C CK A+K+++I ++PN+L I LKR++
Sbjct: 621 GDISSLDEALERFTSTEVLDGENKYHCSRCKSYERAKKKLTIEEAPNVLTIALKRYQSGK 680
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIG 322
GKI KAI F + L + +M + D P Y L+ +VH + SGHY Y+KD G
Sbjct: 681 FGKISKAIRFPDTLNMGHYMNPDTDDISPVYSLYAVVVHHDVMNAAFSGHYVCYVKDTQG 740
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSA 360
+W+ +DS V +L V+S+ Y+L + R + R S+
Sbjct: 741 KWFKADDSQVKPVSLDNVMSKCAYMLLYARCSPRAPSS 778
>gi|449511450|ref|XP_004163959.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 16-like, partial [Cucumis sativus]
Length = 1115
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 123/334 (36%), Positives = 187/334 (55%), Gaps = 27/334 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N VLQCLT+TPPL + L+ HS C ++R C C
Sbjct: 597 PSGLVNCGNSCYANVVLQCLTFTPPLTAYFLQGLHSKACA-----------KERWCFTCE 645
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
E I+ + L +P +I S LR G++EDAHEFLR ID + C +
Sbjct: 646 FESLILEAKEGKSPL-SPFRIISQLRKIGSQLVNGKEEDAHEFLRCAIDTMQSICFMEAQ 704
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
R G + ++++ FGG L S++KC C +S +++ I+D++++I
Sbjct: 705 ASRSG-----------PVEEETTLIGLTFGGYLLSKIKCTRCENKSERIERILDLTVEIS 753
Query: 206 NSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
+++EA+Q++ PE+LDG+N+Y C C V ARK++SIL++PNIL I LKRF+
Sbjct: 754 GDIETIEEALQQYTSPEILDGDNRYHCTRCNSYVKARKRLSILEAPNILTIALKRFQSGK 813
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIG 322
GK++K + F E+L L+ +M S D P Y+L+G IVH + SGHY YI++
Sbjct: 814 FGKLNKPVIFSEILDLAPYMSSRS-DKSPVYRLYGVIVHLDVMNAAFSGHYVCYIRNNQN 872
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
+W+ +DS V+ ++ VL+ Y+LF+ R + R
Sbjct: 873 KWFKVDDSTVTAMDVKNVLTRGAYMLFYARCSPR 906
>gi|402913327|ref|XP_003919158.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 392
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 116/336 (34%), Positives = 187/336 (55%), Gaps = 31/336 (9%)
Query: 20 RKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKR 79
R+ GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS LC R +
Sbjct: 73 RRPAAVGAGLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQLC-----------HRHK 121
Query: 80 ECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNT 139
C C +E I R+L P + + A F G+QEDAHEFL +++DA
Sbjct: 122 CCMLCTMEAHITRAL------HCPGHVIQPSQALAAGFHRGKQEDAHEFLMFIVDAMKKA 175
Query: 140 CLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMD 199
CL G + + ++++ +IFGG +SQ+KCL C S+ D +D
Sbjct: 176 CLP-------------GHKQVDHDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLD 222
Query: 200 ISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
I+LDI + S+K+A+++ +PE L+G N Y C C + A K ++ S +L++ LKR
Sbjct: 223 IALDIQAAQSVKQALEQVVKPEELNGENAYHCGLCLQKAPASKTFTLHTSAKVLILVLKR 282
Query: 260 FEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKD 319
F + G K+ K + + E L + +M + + P Y L+ +VH+G+S +GHY +Y+K
Sbjct: 283 FSDVTGNKLAKNVQYPECLDIQPYMSQQNTGPL-VYVLYAVLVHAGWSCHNGHYLSYVKA 341
Query: 320 AIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQ 355
G+WY +D+ V+ ++ VLS++ Y+LF+I+ ++
Sbjct: 342 PGGQWYKMDDAEVTACSIASVLSQQAYVLFYIQKSE 377
>gi|426358757|ref|XP_004046661.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Gorilla
gorilla gorilla]
Length = 530
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 184/328 (56%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKGCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRALY------RPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +S++KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGYWRSEIKCLHCHGMSDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+K+A+++ +PE L+G N Y C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVKQALEQLVKPEELNGENAYHCALCLQKAPASKTLTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY
Sbjct: 291 LAKNVQYPECLDMQPYMSQQNTGPLV-YVLYAVLVHTGWSCHNGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ S + LS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTASGITSALSQQAYVLFYIQKSE 377
>gi|426358866|ref|XP_004046711.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Gorilla
gorilla gorilla]
Length = 530
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 185/328 (56%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLA++ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLASYMLSPEHSQTC-----------HRHKGCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHVTRALY------RPGHVIQPSQALAAGFHRGKQEDAHEFLMFAVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ++CL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSNDTTLIHQIFGGYWRSQIRCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+K+A+++ +PE L+G N Y+C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVKQALEQLVKPEELNGENAYQCGLCLQKAPASKTLTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + +M + + P Y L+ +VH+G+S SGHY +Y+K G+WY
Sbjct: 291 LAKNVQYPECLDMQPYMSQQNTGPLV-YVLYAVLVHAGWSCHSGHYLSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ S + VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTASGITSVLSQQAYVLFYIQKSE 377
>gi|118388360|ref|XP_001027278.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89309048|gb|EAS07036.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 778
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 123/330 (37%), Positives = 186/330 (56%), Gaps = 30/330 (9%)
Query: 24 GPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPF 83
GP GL NLGN+C+ NSVLQCLTYTPPLAN+ L +H C ++ C
Sbjct: 54 GP--GLANLGNTCFFNSVLQCLTYTPPLANYLLSGEHKKTC----------PRKESFCAI 101
Query: 84 CILEKRIVRSLSVDLT-LDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR 142
C+LE+ I + S + + P KI +R + FK GRQ+D+HE LR ++++ + L
Sbjct: 102 CLLEQHIEQCFSQNRPPVVQPRKIIQNMRYINKKFKLGRQDDSHELLRLLLESMQKSALD 161
Query: 143 LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISL 202
K + I + + K +F G L+SQV+C C S ++ D+SL
Sbjct: 162 FK------------PKVDQKIEEATPIYK-MFAGKLKSQVECSVCNYRSENIEAFYDLSL 208
Query: 203 DILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEG 262
+ S ++++ + FF+ E L+GNNKY+C CKKLV A+K I Q PN+L +Q+KRF
Sbjct: 209 ECKES--VQKSFELFFRKEKLEGNNKYRCSKCKKLVEAQKGYVIHQLPNVLTLQIKRFNN 266
Query: 263 IFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIG 322
F KI+ F + +S ++ +A++ P+ Y L+G ++H G GHYY Y+K++
Sbjct: 267 -FMMKINTHTQFPAEIDISKYVQQANKKPEI-YDLYGVLIHIGGGLHFGHYYCYVKNSND 324
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
WYC NDS VS + QEV E+ Y+LF+++
Sbjct: 325 MWYCMNDSSVSQRSFQEVSKERPYLLFYVK 354
>gi|218202292|gb|EEC84719.1| hypothetical protein OsI_31685 [Oryza sativa Indica Group]
Length = 927
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/334 (38%), Positives = 189/334 (56%), Gaps = 27/334 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL NLGNSCY N+VLQCL +T PL + + HS C +K C C
Sbjct: 381 PFGLVNLGNSCYANAVLQCLAFTRPLTAYLTEGLHSRNCS-----------KKEWCFMCE 429
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
EK I+ L +P I S LR F GR+EDAHEFLRY ID + ++ K
Sbjct: 430 FEKLILEGRRGKSHL-SPTGILSHLRDIGSSFGPGREEDAHEFLRYAIDTMQSASMKEAK 488
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
+G G E +++V+ IFGG L+S++KC C S + + I+D++++I
Sbjct: 489 -------KNGVYGLPEE----TTLVQLIFGGYLRSKIKCTMCQGSSEQCERILDLTVEID 537
Query: 206 NSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
+L+EA+ +F E+LDG+N+Y C CK A+K+++I ++PNIL I LKR++
Sbjct: 538 GDINTLEEALHRFTSTEILDGDNRYNCSRCKSYERAKKKLTISEAPNILTIALKRYQSGN 597
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIG 322
GKI+KA+ F E L LS++M A D P Y+L+ +VH + SGHY Y+KD G
Sbjct: 598 FGKINKAVRFTEYLNLSNYMSTA-DDISPVYQLYAVVVHHDVMNAAFSGHYVCYVKDTQG 656
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
+W+ +DS V +L++VLS+ Y+LF+ R + R
Sbjct: 657 KWHKMDDSQVKPVSLEKVLSKCAYMLFYARCSPR 690
>gi|351702295|gb|EHB05214.1| Ubiquitin carboxyl-terminal hydrolase 17 [Heterocephalus glaber]
Length = 491
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 179/342 (52%), Gaps = 40/342 (11%)
Query: 16 LSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDA 75
LS KR G GL NLGN+CY+N+ LQCLTYTPPLAN+ L +H C LTG
Sbjct: 37 LSWKRPHGVGA-GLWNLGNTCYVNATLQCLTYTPPLANYMLSREHKPTCPSLTG------ 89
Query: 76 ERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDA 135
C C L++ + +L P ++ L F +QEDAHEFL +++DA
Sbjct: 90 -----CMLCALQRHVTHALR------HPGRVIQPLHTLIAAFHRQKQEDAHEFLMFIVDA 138
Query: 136 CHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVD 195
E + ++ IFGG +SQ+KCL CG+ S+ D
Sbjct: 139 MQQ---------------------AELHSEDRELMHHIFGGYWRSQIKCLHCGSTSDTFD 177
Query: 196 EIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVI 255
+DI+LDI + S+K+A+ + PE L G+N Y C C + + A K MS+ S +L++
Sbjct: 178 PYLDITLDIKAAQSVKQALTRSIAPEELSGDNAYHCSVCLQKMPATKTMSLHTSSEVLIL 237
Query: 256 QLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYA 315
LKRF G K K + + E L + +M + ++ P Y L+ ++H+G + SGHY++
Sbjct: 238 VLKRFSDFTGEKFAKHVQYSECLDMQPYMSEQNRGPL-LYTLYAVLIHAGSTCHSGHYFS 296
Query: 316 YIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
Y+K GRWY ND+ V+ + VL++ Y+LF++R P
Sbjct: 297 YVKAGDGRWYQMNDNKVTACDTRCVLAQDAYVLFYVRKTNLP 338
>gi|389744531|gb|EIM85714.1| cysteine proteinase [Stereum hirsutum FP-91666 SS1]
Length = 766
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/364 (35%), Positives = 191/364 (52%), Gaps = 33/364 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N GN+C+LNS LQCL +TP L + L + C+ K C C L
Sbjct: 141 GLHNTGNTCFLNSALQCLLHTPGLLHILLAHTKTDPCRA-----------KGFCMSCCLR 189
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
++ S PA++ + L A+H + GRQED+HEFLRY IDA +CL
Sbjct: 190 GVLLNSHFTRQRSFTPAQVTNNLSAIAKHLRRGRQEDSHEFLRYAIDALQKSCL------ 243
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+G + ++ V ++FGG L+S+V C +CG S+ D I+D+S+DI +
Sbjct: 244 ------AGYPPKLDPKLAETTWVHKLFGGKLRSRVTCQSCGHNSDTFDNILDLSIDIFGA 297
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A++KF + L G +KYKCD CK+ V A K+ +I ++P +L I LKRF + G K
Sbjct: 298 SSVQQALKKFVAIDSLKGADKYKCDACKRRVVAEKRFTIHEAPVVLTIHLKRFSPL-GRK 356
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I AI ++E L L+ +M + P Y L+G I H+G P+SGHYYA+++ G WY
Sbjct: 357 IGHAIKYDEKLTLAPYMSEGQFG--PSYALYGVISHAGGGPNSGHYYAHVRGPNGSWYEM 414
Query: 328 NDSYVSVSTL---QEVLSEKVYILFFI----RANQRPVSANGTFASNGVKSHENGKEAYK 380
ND V+ + + Y+LF++ +A Q V NG A +H NG
Sbjct: 415 NDETVTPAGMGGEAPTGLRSAYMLFYVMEKGQALQAAVGMNGAGAYVNGNAHSNGHGQNG 474
Query: 381 GVKG 384
V G
Sbjct: 475 AVNG 478
>gi|357153956|ref|XP_003576621.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like
[Brachypodium distachyon]
Length = 959
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 193/338 (57%), Gaps = 20/338 (5%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSAL----DAERKREC 81
P GL NLGNSCY+N+VLQCL +T PL + + HS CK + ++ +K C
Sbjct: 406 PFGLCNLGNSCYVNAVLQCLAFTRPLTAYLFEGLHSKKCKLMLNFYSMCYTAFCSKKEWC 465
Query: 82 PFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL 141
C EK IV + L +P I S L F G++EDAHEFLRY ID
Sbjct: 466 FLCEFEKLIVEGKAGKSPL-SPTGILSHLHDIGSSFGLGKEEDAHEFLRYAIDT------ 518
Query: 142 RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDIS 201
+++ K +G G E +++++ +FGG ++SQ+KC C S + + I+D++
Sbjct: 519 -IQRASMKEAEKNGVGKLAEE----TTLMQLMFGGFVRSQIKCTKCQVSSGQCERILDLT 573
Query: 202 LDILNSCS-LKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF 260
++I S L+EA+ +F EVLDG+NKY C C A+K+++I ++PNIL I LKR+
Sbjct: 574 VEIDGDISTLEEALHQFTSTEVLDGDNKYHCSRCNSYERAKKKLTIYEAPNILTIALKRY 633
Query: 261 EGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIK 318
+ GKI+KAI+F E L LSS+M + D P Y+L+ +VH + SGHY Y+K
Sbjct: 634 QTGSSGKINKAISFPECLNLSSYM-STTNDYSPVYRLYAVVVHHDVQNAAFSGHYVCYVK 692
Query: 319 DAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
D+ +W+ +D V +L++VL++ Y+LF+ R + R
Sbjct: 693 DSHEKWHEMDDRQVKSVSLEKVLTKCAYMLFYARCSPR 730
>gi|354501314|ref|XP_003512737.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Cricetulus griseus]
gi|344238609|gb|EGV94712.1| Ubiquitin carboxyl-terminal hydrolase DUB-1 [Cricetulus griseus]
Length = 482
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 202/398 (50%), Gaps = 43/398 (10%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
E +SWQ G GL N GNSCY+N+VLQCLT+TPPL N+ L +HS C
Sbjct: 98 EFHLSWQ-----RPHDVGA---GLENTGNSCYMNAVLQCLTHTPPLVNYMLSREHSQNCC 149
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
GD C C +E + RSL L + IQ ++ A F RQEDA
Sbjct: 150 H-QGD----------CMICAMEAHVTRSL-----LYSGDVIQPSEKLTAA-FHKHRQEDA 192
Query: 126 HEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
HEFL + ++A H +CL GS G E SS++ EIFGG+ +SQ+KCL
Sbjct: 193 HEFLLFTLNAMHTSCL---------PGSKLLGCTSEQ----SSLIHEIFGGSWKSQIKCL 239
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
C ++ ++ +DI+LDI + S+ +A++ E L G N Y CDNC++ A K ++
Sbjct: 240 HCNETTDLLEPFLDITLDIQTAQSVNQALENLVMEEQLCGENAYHCDNCRQKTMASKTLT 299
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
+ +P +L++ L RF G K D+ +++ E ++ ++ + P Y L+ +VH G
Sbjct: 300 VKDAPKVLLLVLNRFSEFTGDKKDRKVSYPESFDFQPYISQSHRQPL-FYSLYAVLVHDG 358
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFA 365
+ SGHY+ Y+K G WY +DS V+ + VLSE Y+LF+++ Q + N
Sbjct: 359 VTCHSGHYFCYVKAGNGHWYKMDDSSVTRCDVNSVLSEPAYVLFYVQ--QTDLRTNLWVL 416
Query: 366 SNGVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSSRK 403
S H+ G+ Y + P +A E ++ K
Sbjct: 417 SQA--EHQVGESWYTTINRGSPTEAAEPPDHTENTAAK 452
>gi|356546765|ref|XP_003541793.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Glycine
max]
Length = 990
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/335 (40%), Positives = 184/335 (54%), Gaps = 26/335 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N+VLQCLT T PL + L HS C K C C
Sbjct: 470 PRGLLNCGNSCYANAVLQCLTSTKPLVVYLLYRSHSKACCA-----------KDWCLMCE 518
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
LEK I+ L + +P++I +R H G QEDAHEFLR +I + + CL
Sbjct: 519 LEKHIM-VLRENGDPLSPSRILWHMRSINCHMGEGNQEDAHEFLRLLIASMQSICLE--- 574
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
+ GG + ++ ++ FGG LQS+VKCL C ES + + IMD++L+IL
Sbjct: 575 -------ALGGEKKVDPRLQETTFIQHTFGGRLQSKVKCLKCNHESERYENIMDLTLEIL 627
Query: 206 NSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
SL++A+ +F PE LDG N Y+C C V ARKQ+SI ++PNIL I LKRF+
Sbjct: 628 GWVESLEDALTQFTSPEDLDGENMYRCGRCTSYVRARKQLSIHEAPNILTIVLKRFQEGR 687
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH--SGFSPDSGHYYAYIKDAIG 322
GKI+K I F E+L + FM P P Y L+ +VH + + SGHY +Y+KD G
Sbjct: 688 YGKINKCITFPEMLDMIPFMTGTGDIP-PLYMLYAVVVHLDTLNASFSGHYVSYVKDLQG 746
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
W+ +D V + +V+SE YILF++R+ RP
Sbjct: 747 NWFRIDDIEVQPVLVNQVMSEGAYILFYMRSCPRP 781
>gi|402912436|ref|XP_003918772.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 529
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 185/328 (56%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS LC +R + C C +E
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQLC-----------QRHKCCMLCTME 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R++ P + + A F G+QEDAHEFL +++DA CL
Sbjct: 130 AHITRAV------HCPGHVIQPSQALAAGFHRGKQEDAHEFLMFIVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+K+A+++ +PE L+G N Y C C + A K ++ S +L++ LKRF + G K
Sbjct: 231 QSVKQALEQVMKPEELNGENAYHCGLCLQKAPASKTFTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + +M + + P Y L+ +VH+G+ +GHY +Y+K G+WY
Sbjct: 291 LAKNVQYPECLDMQPYMSQQNTGPL-VYVLYAVLVHAGWCCHNGHYLSYVKAPGGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ ++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTACSIASVLSQQAYVLFYIQKSE 377
>gi|40804411|gb|AAR91701.1| deubiquitinating enzyme 3 [Homo sapiens]
gi|162317638|gb|AAI56291.1| Deubiquitinating enzyme 3 [synthetic construct]
gi|162319434|gb|AAI57074.1| Deubiquitinating enzyme 3 [synthetic construct]
Length = 530
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 184/328 (56%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY N+ LQCLTYTPPLAN+ L +HS C +R + C C ++
Sbjct: 81 GLQNMGNTCYENASLQCLTYTPPLANYMLSREHSQTC-----------QRPKCCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I L +P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHIT------WALHSPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C + D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGIPDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+K+A+++ +PE L+G N Y C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVKQALEQLVKPEELNGENAYHCGLCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY
Sbjct: 291 LAKNVQYPECLDMQPYMSQQNTGPL-VYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ S++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTASSITSVLSQQAYVLFYIQKSE 377
>gi|356498762|ref|XP_003518218.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Glycine
max]
Length = 879
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/327 (39%), Positives = 183/327 (55%), Gaps = 26/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRNLGN+C+LNSVLQCLTYT PLA + +H + C + G C C ++
Sbjct: 96 GLRNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHKTSC-HVAG----------FCALCAIQ 144
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R+L + +P + LR + +F+ RQEDAHE++ +++ H CL
Sbjct: 145 NHVSRALQSTGRILSPEDLVGNLRCISRNFRNARQEDAHEYMVNLLECMHKCCL------ 198
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G S G E S V +IFGG L+SQVKC C SNK D +D+SL+I +
Sbjct: 199 -PSGIPSESPGAYE-----KSFVHKIFGGRLRSQVKCHQCSYCSNKFDPFLDLSLEIFKA 252
Query: 208 CSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF-G 265
SL++A+ F E LDG K Y C CK+ V A KQ++I ++P +L I LKRF G
Sbjct: 253 DSLQKALSNFTAAEWLDGGEKEYHCQRCKQKVRALKQLTIHKAPYVLTIHLKRFHAHDPG 312
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KI K I F L L F+ S D +Y L+G +VH+G S SGHYY Y++ + WY
Sbjct: 313 QKIKKKIQFGCALDLKPFV-SGSYDGDVKYSLYGVLVHAGSSTHSGHYYCYVRTSNNMWY 371
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ VS + +EVL+++ Y+LF++R
Sbjct: 372 TLDDNRVSHVSEREVLNQQAYMLFYVR 398
>gi|357125023|ref|XP_003564195.1| PREDICTED: uncharacterized protein LOC100826635 [Brachypodium
distachyon]
Length = 895
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/327 (37%), Positives = 182/327 (55%), Gaps = 26/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CYLNSVLQCLTYT P A + +H S C+ C C L+
Sbjct: 54 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGRHKSSCRTAGF-----------CALCALQ 102
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ +L + P++I LR + F+ RQEDAHE + ++++ H CL
Sbjct: 103 NHVKTALQSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCL------ 156
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G S E S+V IFGG L+SQVKC C SNK D +D+SLDI +
Sbjct: 157 -PSGVPSESPSAYE-----KSLVHRIFGGRLRSQVKCTRCSHCSNKFDPFLDLSLDIAKA 210
Query: 208 CSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFG- 265
+L A+Q F + E+LDG K Y+C+ C++ V A+K+ +I ++PN+L I LKRF
Sbjct: 211 SNLVRALQNFTEDELLDGGQKQYQCERCRQKVVAKKRFTIDRAPNVLTIHLKRFSPFNPR 270
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KIDK + F+ VL L F+ S+ +Y L+G +VH+G++ GHYY +++ + G W+
Sbjct: 271 DKIDKKVDFQPVLDLKPFVSD-SKVSDYKYSLYGVLVHAGWNTQCGHYYCFVRTSSGMWH 329
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ V +VL +K Y+LF++R
Sbjct: 330 NLDDNQVRQVREADVLKQKAYMLFYVR 356
>gi|125561915|gb|EAZ07363.1| hypothetical protein OsI_29613 [Oryza sativa Indica Group]
Length = 978
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 189/338 (55%), Gaps = 26/338 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL NLGNSCY N+VLQCL +T PL ++ L HS C +K C C
Sbjct: 449 PFGLHNLGNSCYANAVLQCLMFTRPLTSYLLGGLHSKNCS-----------KKEWCFMCE 497
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
EK + + L +P I S L F G+QEDAHEFLRY IDA + C+ K+
Sbjct: 498 FEKLVGEGRQGKIAL-SPTGILSHLPDIGSSFGPGKQEDAHEFLRYAIDAMQSVCM--KE 554
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
R+ G ++ +++++ IFGG L+S+++C C A S + + I+D++++I
Sbjct: 555 ARK---------SGTHRLHEETTLMQLIFGGYLRSKIRCTRCDATSEQHERILDLTVEID 605
Query: 206 NSCS-LKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
S L+ A+++F EVLDG+NKYKC CK A+K+++I ++PN+L I LKR++
Sbjct: 606 GDISSLEGALERFTSTEVLDGDNKYKCSRCKSHERAKKKLTISEAPNVLTIALKRYQSGK 665
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIG 322
GKI+KAI F E L L +M + D P + + VH + SGHY Y+KD G
Sbjct: 666 FGKINKAIRFPETLNLQRYMSPKADDTSPGLQPVCSGVHHDIMNAAFSGHYVCYVKDTHG 725
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSA 360
+WY +DS V +L+ V+S+ Y+L + R + R S+
Sbjct: 726 KWYKTDDSQVKPVSLENVMSKCAYMLLYARCSPRAPSS 763
>gi|402912993|ref|XP_003919017.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 529
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 185/328 (56%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS LC +R + C C +E
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQLC-----------QRHKCCMLCTME 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R++ P + + A F G+QEDAHEFL +++DA CL
Sbjct: 130 AHITRAV------HCPGHVIQPSQALAAGFHRGKQEDAHEFLMFIVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+K+A+++ +PE L+G N Y C C + A K ++ S +L++ LKRF + G K
Sbjct: 231 QSVKQALEQVVKPEELNGENAYHCGLCLQKAPASKTFTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + +M + + P Y L+ +VH+G+ +GHY +Y+K G+WY
Sbjct: 291 LAKNVQYPECLDMQPYMSQQNTGPL-VYVLYAVLVHAGWCCHNGHYLSYVKAPGGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ ++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTACSIASVLSQQAYVLFYIQKSE 377
>gi|224063313|ref|XP_002301091.1| predicted protein [Populus trichocarpa]
gi|222842817|gb|EEE80364.1| predicted protein [Populus trichocarpa]
Length = 1095
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/337 (36%), Positives = 193/337 (57%), Gaps = 33/337 (9%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N+VLQCL +TPPL ++ ++ HS C +K C C
Sbjct: 557 PCGLINCGNSCYANAVLQCLAFTPPLTSYFVQGLHSKACV-----------KKERCFSCE 605
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
EK I+++ L +P I S L+ GR+EDAHEFLRY IDA + CL+ +
Sbjct: 606 FEKVILKAKEGKSPL-SPIGILSQLQNIGSQLGNGREEDAHEFLRYAIDAMQSVCLKEAR 664
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
+ ++ ++++ FGG L+S++KC+ C +S + +MD++++I
Sbjct: 665 V-----------NAVDSFEEEATLIGLTFGGYLRSKIKCMKCHYKSEWQERMMDLTVEIE 713
Query: 206 NSCS-LKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
L++A+++F E+LDG+NKY+C C+ A+K+++IL++PN+L I LKRF+
Sbjct: 714 GDIGKLEDALRRFTGTEILDGDNKYQCGRCRSYEKAKKKLTILEAPNVLTIALKRFQSGK 773
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH-----SGFSPDSGHYYAYIKD 319
GK++K+I F E+L L+ +M S D P Y+L+G IVH + F SGHY Y+K+
Sbjct: 774 FGKLNKSIRFPEILDLAPYMSGTS-DKSPIYRLYGVIVHLDVMNAAF---SGHYVCYVKN 829
Query: 320 AIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
+W+ +DS V+ L+ VLS+ Y+L + R + R
Sbjct: 830 IQNKWFKIDDSTVTAVELERVLSKGAYMLLYARCSPR 866
>gi|153792150|ref|NP_958804.2| ubiquitin carboxyl-terminal hydrolase 17 [Homo sapiens]
gi|187663988|sp|Q6R6M4.2|U17L2_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17;
Short=USP17; AltName: Full=Deubiquitinating enzyme
17-like protein 2; AltName: Full=Deubiquitinating
protein 3; Short=DUB-3; AltName: Full=Ubiquitin
carboxyl-terminal hydrolase 17-like protein 2; AltName:
Full=Ubiquitin thioesterase 17-like protein 2; AltName:
Full=Ubiquitin-specific-processing protease 17-like
protein 2
Length = 530
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 183/328 (55%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY N+ LQCLTYTPPLAN+ L +HS C +R + C C ++
Sbjct: 81 GLQNMGNTCYENASLQCLTYTPPLANYMLSREHSQTC-----------QRPKCCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I L +P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHIT------WALHSPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+K+A+++ +PE L+G N Y C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVKQALEQLVKPEELNGENAYHCGLCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + +M + + P Y L+ +VH+G+S GHY++Y+K G+WY
Sbjct: 291 LAKNVQYPECLDMQPYMSQQNTGPL-VYVLYAVLVHAGWSCHDGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ ++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAKVTACSITSVLSQQAYVLFYIQKSE 377
>gi|356518408|ref|XP_003527871.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
max]
Length = 1125
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/334 (36%), Positives = 185/334 (55%), Gaps = 27/334 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N+VLQCL +TPPL + L+ H C K+ C C
Sbjct: 599 PFGLVNCGNSCYANAVLQCLAFTPPLTAYLLQGLHLKSCAN-----------KKWCFTCE 647
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
E+ I++S + +P I S L+ GR+EDAHEFLR+VID + CL
Sbjct: 648 FERLILKSKDTKSAV-SPMGIISHLQNIGSQLGNGREEDAHEFLRHVIDTMQSVCL---- 702
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
+ G ++ ++++ + FGG L+S++KC+ CG +S + +MD++++I
Sbjct: 703 -------TEAGVNASGSLEEDTTLMGQTFGGYLRSKIKCMRCGGKSEHQERMMDLTVEIE 755
Query: 206 NS-CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
+L EA+++F E LDG NKY C CK A+K++++ ++PN+L + LKRF+
Sbjct: 756 GEITTLVEALRRFTSTETLDGENKYHCVRCKSYEKAKKKLTVSEAPNVLTVALKRFQSGK 815
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIG 322
GK++K I F E+L L+ FM S D P Y+L+G +VH + SGHY Y+K+
Sbjct: 816 FGKLNKPIQFPEILNLAPFMSGTS-DKSPIYRLYGVVVHLDVMNASFSGHYVCYVKNIQN 874
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
+W +DS V+ L VL++ YILF+ R + R
Sbjct: 875 KWSKVDDSVVTAVELDRVLTKGAYILFYARCSPR 908
>gi|359494410|ref|XP_002266179.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Vitis
vinifera]
Length = 906
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 152/417 (36%), Positives = 208/417 (49%), Gaps = 49/417 (11%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N+VLQCLT T PL + L+ HS C C C
Sbjct: 378 PRGLLNCGNSCYANAVLQCLTCTKPLIIYLLQRSHSRTCCVTNW-----------CLMCE 426
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
LEK ++ L +P++I S +R G QEDAHEFLR ++ + + CL
Sbjct: 427 LEKHVMMLRESGGPL-SPSRILSHMRSINCQIGDGSQEDAHEFLRLLVTSMQSICLE--- 482
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
+ GG ET + ++ FGG L+S+VKCL C ES + + IMD++L+I
Sbjct: 483 --KLGGEREVDARLQET-----TFIQHTFGGRLRSKVKCLRCHLESERYENIMDLTLEIF 535
Query: 206 NSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
SL++A+ +F PE LDG N Y+C C V ARKQ+SI ++PNIL I LKRF+
Sbjct: 536 GWVESLEDALTQFTTPEDLDGENMYRCRRCTTYVRARKQLSIHEAPNILTIVLKRFQEGR 595
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIG 322
GKI+K I F ++L + FM + D P Y L+ +VH + SGHY AY+KD G
Sbjct: 596 YGKINKCITFPDMLDMIPFM-TGTYDVPPLYMLYAVVVHMDTLNASFSGHYVAYVKDLQG 654
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKSHENGKEAYKGV 382
W+ +D+ V + +V+SE YILF++R+ RP A K +
Sbjct: 655 NWFRVDDAEVQPVSTNQVMSEGAYILFYMRSWPRPPRAFPV----------------KAI 698
Query: 383 KGTVPLKAVATKPSAEQSSRKTPSTISKVEKVPSNPRLKFSISGSSGCKGVPPTSNG 439
+ P A +SSR P V PSNP+ + S SS TSNG
Sbjct: 699 QQQAPASAKHCSSKTHKSSRSKPRG-DFVGLEPSNPKREVSPGFSSA------TSNG 748
>gi|334182643|ref|NP_001185019.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
gi|332191422|gb|AEE29543.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
Length = 928
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 133/335 (39%), Positives = 188/335 (56%), Gaps = 26/335 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N+VLQ LT T PL + L+ HS C K C C
Sbjct: 441 PRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSG-----------KDWCLMCE 489
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
LE+ ++ L A ++I S +R G QEDAHEFLR ++ + + CL
Sbjct: 490 LEQHVMMLRESGGPLSA-SRILSHMRSINCQIGDGSQEDAHEFLRLLVASMQSICLE--- 545
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
R GG + ET ++V+ +FGG L+S+VKCL C ES + + IMD++L+I
Sbjct: 546 --RLGGETKVDPRLQET-----TLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIY 598
Query: 206 NSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
SL++A+ +F +PE LDG N Y+C C V ARK++SI ++PNIL I LKRF+
Sbjct: 599 GWVESLQDALTQFTRPEDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQEGR 658
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH--SGFSPDSGHYYAYIKDAIG 322
GKI+K I+F E+L + FM + P P Y L+ IVH + + SGHY +Y+KD G
Sbjct: 659 YGKINKCISFPEMLDMIPFMTRTGDVP-PLYMLYAVIVHLDTLNASFSGHYISYVKDLRG 717
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
WY +DS + + +V+SE Y+LF++R+ RP
Sbjct: 718 NWYRIDDSEIHPVPMTQVMSEGAYMLFYMRSYPRP 752
>gi|112983634|ref|NP_001001559.2| deubiquitinating enzyme 2a [Mus musculus]
gi|148684706|gb|EDL16653.1| mCG124600 [Mus musculus]
gi|148922521|gb|AAI46299.1| Deubiquitinating enzyme 2a [synthetic construct]
gi|151555365|gb|AAI48744.1| Deubiquitinating enzyme 2a [synthetic construct]
Length = 545
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 189/347 (54%), Gaps = 31/347 (8%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
EL + +PSL E + GP GL+N GNSCYLN+ LQCLT+TPPLA++ L ++S C
Sbjct: 32 ELTANDKPSLSWECPQ--GPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCC 89
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
G C C +E + +SL + D Q F +H +QEDA
Sbjct: 90 SPEG-----------CKMCAMEAHVTQSLLHSHSGDVMKPSQILTSAFHKH----QQEDA 134
Query: 126 HEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
HEFL + ++ H +CL++ + E + SS + +IFGG +SQ+KCL
Sbjct: 135 HEFLMFTLETMHESCLQVHR-------------QSEPTSEDSSPIHDIFGGLWRSQIKCL 181
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
C S+ D +D+ LDI ++ S+ +A+ + E L G N Y C C++ + A K +
Sbjct: 182 HCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKSEELRGENAYYCGRCRQKMPASKTLH 241
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
I +P +L++ LKRF G K+D+ +++ E L L ++ + + P P Y L+ +VH G
Sbjct: 242 IHSAPKVLLLVLKRFSAFMGNKLDRKVSYPEFLDLKPYLSQPTGGPLP-YALYAVLVHEG 300
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+ SGHY++Y+K G+WY +D+ V+ + VL+E Y+LF+++
Sbjct: 301 ATCHSGHYFSYVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFYVQ 347
>gi|18394440|ref|NP_564014.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
gi|166201354|sp|Q9FPS9.2|UBP15_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 15; AltName:
Full=Deubiquitinating enzyme 15; Short=AtUBP15; AltName:
Full=Ubiquitin thioesterase 15; AltName:
Full=Ubiquitin-specific-processing protease 15
gi|332191421|gb|AEE29542.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
Length = 924
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 133/335 (39%), Positives = 188/335 (56%), Gaps = 26/335 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N+VLQ LT T PL + L+ HS C K C C
Sbjct: 437 PRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSG-----------KDWCLMCE 485
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
LE+ ++ L A ++I S +R G QEDAHEFLR ++ + + CL
Sbjct: 486 LEQHVMMLRESGGPLSA-SRILSHMRSINCQIGDGSQEDAHEFLRLLVASMQSICLE--- 541
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
R GG + ET ++V+ +FGG L+S+VKCL C ES + + IMD++L+I
Sbjct: 542 --RLGGETKVDPRLQET-----TLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIY 594
Query: 206 NSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
SL++A+ +F +PE LDG N Y+C C V ARK++SI ++PNIL I LKRF+
Sbjct: 595 GWVESLQDALTQFTRPEDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQEGR 654
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH--SGFSPDSGHYYAYIKDAIG 322
GKI+K I+F E+L + FM + P P Y L+ IVH + + SGHY +Y+KD G
Sbjct: 655 YGKINKCISFPEMLDMIPFMTRTGDVP-PLYMLYAVIVHLDTLNASFSGHYISYVKDLRG 713
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
WY +DS + + +V+SE Y+LF++R+ RP
Sbjct: 714 NWYRIDDSEIHPVPMTQVMSEGAYMLFYMRSYPRP 748
>gi|297850108|ref|XP_002892935.1| ubiquitin-specific protease 15 [Arabidopsis lyrata subsp. lyrata]
gi|297338777|gb|EFH69194.1| ubiquitin-specific protease 15 [Arabidopsis lyrata subsp. lyrata]
Length = 926
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 133/335 (39%), Positives = 188/335 (56%), Gaps = 26/335 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N+VLQ LT T PL + L+ HS C K C C
Sbjct: 441 PRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSG-----------KDWCLMCE 489
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
LE+ ++ L A ++I S +R G QEDAHEFLR ++ + + CL
Sbjct: 490 LEQHVMMLRESGGPLSA-SRILSHMRSINCQIGDGSQEDAHEFLRLLVASMQSICLE--- 545
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
R GG + ET ++V+ +FGG L+S+VKCL C ES + + IMD++L+I
Sbjct: 546 --RLGGETKVDPRLQET-----TLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIY 598
Query: 206 NSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
SL++A+ +F +PE LDG N Y+C C V ARK++SI ++PNIL I LKRF+
Sbjct: 599 GWVESLQDALTQFTRPEDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQEGR 658
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH--SGFSPDSGHYYAYIKDAIG 322
GKI+K I+F E+L + FM + P P Y L+ IVH + + SGHY +Y+KD G
Sbjct: 659 YGKINKCISFPEMLDMIPFMTRTGDVP-PLYMLYAVIVHLDTLNASFSGHYISYVKDLRG 717
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
WY +DS + + +V+SE Y+LF++R+ RP
Sbjct: 718 NWYRIDDSEIHRVPMTQVMSEGAYMLFYMRSYPRP 752
>gi|115466786|ref|NP_001056992.1| Os06g0184300 [Oryza sativa Japonica Group]
gi|55773912|dbj|BAD72517.1| putative ubiquitin-specific protease 23 [Oryza sativa Japonica
Group]
gi|113595032|dbj|BAF18906.1| Os06g0184300 [Oryza sativa Japonica Group]
Length = 899
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 181/327 (55%), Gaps = 26/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CYLNSVLQCLTYT P A + +H S C+ C C L+
Sbjct: 60 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGF-----------CALCALQ 108
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ +L + P++I LR + F+ RQEDAHE + ++++ H CL
Sbjct: 109 NHVKTALQSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCL------ 162
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G S E S+V +IFGG L+SQVKC C SNK D +D+SLDI +
Sbjct: 163 -PSGVPSESPSAYE-----KSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKA 216
Query: 208 CSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF-G 265
SL A+Q F E+LDG K Y+C C+K V A+K+ +I ++P +L I LKRF
Sbjct: 217 TSLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPR 276
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KIDK + F+ +L L F+ S+ +Y L+G +VH+G++ SGHYY +++ + G W+
Sbjct: 277 EKIDKKVDFQPMLDLKPFISD-SKGADFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWH 335
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ V +VL +K Y+LF++R
Sbjct: 336 NLDDNQVRQVREADVLRQKAYMLFYVR 362
>gi|356551761|ref|XP_003544242.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
max]
Length = 1045
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 122/334 (36%), Positives = 185/334 (55%), Gaps = 28/334 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N+VLQCL +TPPL + L+ HS C K+ C C
Sbjct: 506 PFGLINCGNSCYANAVLQCLAFTPPLTAYLLQGLHSKSCAN-----------KKWCFTCE 554
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
E I++S + + +P I S L+ GR+EDAHEFLR ++ + CL
Sbjct: 555 FESLILKSKDTNSPI-SPVGILSQLQNIGSQLGNGREEDAHEFLRLAVETMQSVCLM--- 610
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
G +++ ++++ FGG LQS++KC+ CG +S + +MD++++I
Sbjct: 611 --------ESGDNMSDSLKEETNLMGLTFGGYLQSKIKCMKCGGKSECQERMMDLTVEIE 662
Query: 206 NS-CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
+L+EA+Q+F E LDG NKY C CK A+K+M++ ++PN+L I LKRF+
Sbjct: 663 GEITTLEEALQQFTSAETLDGENKYHCVRCKSYEKAKKKMTVSEAPNVLTIALKRFQSGK 722
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIG 322
GK++K I F E+L L+ FM S P Y+L+G +VH + SGHY Y+K+
Sbjct: 723 FGKLNKPIRFPEILDLAPFMSGTSD--LPIYRLYGVVVHLDIMNAAFSGHYVCYVKNFQS 780
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
RW+ +DS V+ L+ VL++ Y+LF+ R + R
Sbjct: 781 RWFKVDDSVVTAVELESVLAKGAYMLFYARCSPR 814
>gi|29367503|gb|AAO72607.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
Length = 842
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 181/327 (55%), Gaps = 26/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CYLNSVLQCLTYT P A + +H S C+ C C L+
Sbjct: 3 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGF-----------CALCALQ 51
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ +L + P++I LR + F+ RQEDAHE + ++++ H CL
Sbjct: 52 NHVKTALQSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCL------ 105
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G S E S+V +IFGG L+SQVKC C SNK D +D+SLDI +
Sbjct: 106 -PSGVPSESPSAYE-----KSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKA 159
Query: 208 CSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF-G 265
SL A+Q F E+LDG K Y+C C+K V A+K+ +I ++P +L I LKRF
Sbjct: 160 TSLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPR 219
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KIDK + F+ +L L F+ S+ +Y L+G +VH+G++ SGHYY +++ + G W+
Sbjct: 220 EKIDKKVDFQPMLDLKPFISD-SKVSNLKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWH 278
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ V +VL +K Y+LF++R
Sbjct: 279 NLDDNQVRQVREADVLRQKAYMLFYVR 305
>gi|392568498|gb|EIW61672.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 664
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 176/325 (54%), Gaps = 25/325 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N+GN+C+LNS LQCL +TPPL + LK C+ A + C C L
Sbjct: 114 GLNNIGNTCFLNSALQCLLHTPPLLHVLLKHSKGEPCR---------APKNSYCTICALR 164
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ + S + P I + L++ A+ + GRQED+HEFLRY++DA + L
Sbjct: 165 QVMTEIFSKSHPV-TPYPITTKLQVIAKQMRRGRQEDSHEFLRYLVDALQKSSL------ 217
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+G G + + V +IFGG L+S+V CL+C S+ D ++D+S+DI
Sbjct: 218 ------AGLPGKVDPKVAEKTWVYKIFGGLLRSRVNCLSCDYNSDTYDRMLDLSVDIAGV 271
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
+LK+A++KF + L G +KYKC+ CKK V+A K+ +I ++P +L + LKRF + G K
Sbjct: 272 ATLKDALRKFVAVDRLRGADKYKCEKCKKPVNADKRFTIDEAPVVLTLHLKRFSPM-GRK 330
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I +++ E L L +M P Y L+ I H+G P+SGHYYA++K G WY
Sbjct: 331 IPHPVSYPERLTLQPYMSDGKFGPS--YSLYAVISHAGSGPNSGHYYAHVKGGNGTWYEM 388
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR 352
ND V + Y+LF+IR
Sbjct: 389 NDESVMRQSSAPTNMRSAYMLFYIR 413
>gi|14994718|gb|AAK77003.1| deubiquitinating enzyme 2A [Mus musculus]
Length = 545
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 189/347 (54%), Gaps = 31/347 (8%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
EL + +PSL E + GP GL+N GNSCYLN+ LQCLT+TPPLA++ L ++S C
Sbjct: 32 ELTANDKPSLSWECPQ--GPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCC 89
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
G C C +E + +SL + D Q F +H +QEDA
Sbjct: 90 SPEG-----------CKMCAMEAHVTQSLLHSHSGDVMKPSQILTSAFHKH----QQEDA 134
Query: 126 HEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
HEFL + ++ H +CL++ + E + SS + +IFGG +SQ+KCL
Sbjct: 135 HEFLMFTLETMHESCLQVHR-------------QSEPTSEDSSPIHDIFGGLWRSQIKCL 181
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
C S+ D +D+ LDI ++ S+ +A+ + E L G N Y C C++ + A K +
Sbjct: 182 HCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKSEELRGENAYYCGRCRQKMPASKTLH 241
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
I +P +L++ LKRF G K+D+ +++ E L L ++ + + P P Y L+ +VH G
Sbjct: 242 IHSAPKVLLLVLKRFSAFMGNKLDRKVSYPEFLDLKPYLSQPTGGPLP-YALYAVLVHEG 300
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+ SGHY++Y+K G+WY +D+ V+ + VL+E Y+LF+++
Sbjct: 301 ATCHSGHYFSYVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFYVQ 347
>gi|149742816|ref|XP_001494472.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Equus
caballus]
Length = 535
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 116/337 (34%), Positives = 184/337 (54%), Gaps = 32/337 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLA++ L QHS C + +R C C ++
Sbjct: 82 GLQNMGNTCYVNAALQCLTYTPPLASYMLSQQHSKTC-----------QNQRFCTLCAMQ 130
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + L F RQEDAHEFL + +DA CL + +
Sbjct: 131 VHITRALY------HPGDVIQPLPELVTGFHRRRQEDAHEFLMFTLDAMQQACL--SEYK 182
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+ G S +++V++IFGG +SQ++CL C S+ D +D++LDI +
Sbjct: 183 QVDGHSD------------NTLVRQIFGGYWRSQIQCLHCHGVSDTFDPYLDVTLDIKAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++ +PE LDG N Y C C K V A K +++ S +L++ LKRF G K
Sbjct: 231 LSVNQALEQLVKPEKLDGENSYHCSMCLKKVPASKTLTLHTSSKVLMLLLKRFSNFTGSK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + +M + + P Y L+ +VH+G+S +GHY+ YIK G+WY
Sbjct: 291 MPKDVQYPEYLDMQQYMSQQNSGPL-LYVLYAVLVHAGWSCHNGHYFCYIKAGNGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTF 364
+D+ V+ + LS+ Y+LF+I+ ++ + F
Sbjct: 350 DDAKVTACDVTSALSQCAYVLFYIQKSELERDSGSVF 386
>gi|426343802|ref|XP_004038475.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
6-like, partial [Gorilla gorilla gorilla]
Length = 387
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 113/336 (33%), Positives = 185/336 (55%), Gaps = 31/336 (9%)
Query: 20 RKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKR 79
R+ GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R +
Sbjct: 73 RRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHK 121
Query: 80 ECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNT 139
C C ++ + R+L P + + A F G+QEDAHEFL + +DA
Sbjct: 122 GCMLCTMQAHVTRALY------RPGHVIQPSQALAAGFHRGKQEDAHEFLMFAVDAMKKA 175
Query: 140 CLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMD 199
CL G + + ++++ +IFGG +SQ+KCL C S+ D +D
Sbjct: 176 CL-------------PGHKQVDHHSNDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLD 222
Query: 200 ISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
I+LDI + S+K+A+++ +PE L+G N Y C C + A K +++ S +L++ LKR
Sbjct: 223 IALDIQAAQSVKQALEQLVKPEELNGENAYHCALCLQKAPASKTLTLHTSAKVLILVLKR 282
Query: 260 FEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKD 319
F + G K+ K + + E L + +M + P Y L+ +VH+G+S +GHY++Y+K
Sbjct: 283 FSDVTGNKLVKNVQYPECLDMQPYMSQQITGPLV-YVLYAVLVHAGWSCHNGHYFSYVKA 341
Query: 320 AIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQ 355
G+WY +D+ V+ S + LS++ Y+LF+I+ ++
Sbjct: 342 QEGQWYKMDDAEVTASGITSALSQQAYVLFYIQKSE 377
>gi|218197715|gb|EEC80142.1| hypothetical protein OsI_21934 [Oryza sativa Indica Group]
Length = 940
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 181/327 (55%), Gaps = 26/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CYLNSVLQCLTYT P A + +H S C+ C C L+
Sbjct: 101 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGF-----------CALCALQ 149
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ +L + P++I LR + F+ RQEDAHE + ++++ H CL
Sbjct: 150 NHVKTALQSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCL------ 203
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G S E S+V +IFGG L+SQVKC C SNK D +D+SLDI +
Sbjct: 204 -PSGVPSESPSAYE-----KSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKA 257
Query: 208 CSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF-G 265
SL A+Q F E+LDG K Y+C C+K V A+K+ +I ++P +L I LKRF
Sbjct: 258 TSLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPR 317
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KIDK + F+ +L L F+ S+ +Y L+G +VH+G++ SGHYY +++ + G W+
Sbjct: 318 EKIDKKVDFQPMLDLKPFISD-SKGADFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWH 376
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ V +VL +K Y+LF++R
Sbjct: 377 NLDDNQVRQVREADVLRQKAYMLFYVR 403
>gi|55773913|dbj|BAD72518.1| putative ubiquitin-specific protease 23 [Oryza sativa Japonica
Group]
Length = 874
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 181/327 (55%), Gaps = 26/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CYLNSVLQCLTYT P A + +H S C+ C C L+
Sbjct: 60 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGF-----------CALCALQ 108
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ +L + P++I LR + F+ RQEDAHE + ++++ H CL
Sbjct: 109 NHVKTALQSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCL------ 162
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G S E S+V +IFGG L+SQVKC C SNK D +D+SLDI +
Sbjct: 163 -PSGVPSESPSAYE-----KSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKA 216
Query: 208 CSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF-G 265
SL A+Q F E+LDG K Y+C C+K V A+K+ +I ++P +L I LKRF
Sbjct: 217 TSLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPR 276
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KIDK + F+ +L L F+ S+ +Y L+G +VH+G++ SGHYY +++ + G W+
Sbjct: 277 EKIDKKVDFQPMLDLKPFISD-SKGADFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWH 335
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ V +VL +K Y+LF++R
Sbjct: 336 NLDDNQVRQVREADVLRQKAYMLFYVR 362
>gi|15088628|gb|AAK84135.1|AF393637_1 deubiquitinating enzyme 2A [Mus musculus]
Length = 545
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 189/347 (54%), Gaps = 31/347 (8%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
EL + +PSL E + GP GL+N GNSCYLN+ LQCLT+TPPLA++ L ++S C
Sbjct: 32 ELTANDKPSLSWECPQ--GPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCC 89
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
G C C +E + +SL + D Q F +H +QEDA
Sbjct: 90 SPEG-----------CKMCAMEAHVTQSLLHSHSGDVMKPSQILTSAFHKH----QQEDA 134
Query: 126 HEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
HEFL + ++ H +CL++ + E + SS + +IFGG +SQ+KCL
Sbjct: 135 HEFLMFTLETMHESCLQVHR-------------QSEPTSEDSSPIHDIFGGLWRSQIKCL 181
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
C S+ D +D+ LDI ++ S+ +A+ + E L G N Y C C++ + A K +
Sbjct: 182 HCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKSEELRGENAYYCGRCRQKMPASKTLH 241
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
I +P +L++ LKRF G K+D+ +++ E L L ++ + + P P Y L+ +VH G
Sbjct: 242 IHSAPKVLLLVLKRFSASMGNKLDRKVSYPEFLDLKPYLSQPTGGPLP-YALYAVLVHEG 300
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+ SGHY++Y+K G+WY +D+ V+ + VL+E Y+LF+++
Sbjct: 301 ATCHSGHYFSYVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFYVQ 347
>gi|348552570|ref|XP_003462100.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Cavia
porcellus]
Length = 491
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 124/370 (33%), Positives = 188/370 (50%), Gaps = 47/370 (12%)
Query: 5 HELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLC 64
HE+ +SW+ G GLRNLGN+CY+N+ LQCLTYTPPLAN L L
Sbjct: 40 HEVSLSWKTPY--------GVGAGLRNLGNTCYVNATLQCLTYTPPLANHMLAL------ 85
Query: 65 KQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQED 124
L KR C +C + I ++L P ++ R F QED
Sbjct: 86 -----GLRLSCPGKRICMWCAIRCHITQALR------HPGRVIQPSRALLADFHRENQED 134
Query: 125 AHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
AHEFL +++DA L + S+V+EIFGG +SQ+KC
Sbjct: 135 AHEFLMFIVDAMQKVDLH---------------------SENRSLVREIFGGYWRSQIKC 173
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
L CG+ S+ D +DI LDI ++ S+K+A+ + QPE L G N Y C C + + A K +
Sbjct: 174 LQCGSTSDTFDPYLDIPLDIKSTRSVKQALARSVQPEELSGENAYHCSICLQKMPASKTL 233
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHS 304
++ + +L+I LKRF + G KI K + + E L + +M + + P Y L+ +VH+
Sbjct: 234 TLHTASKVLIILLKRFSDVTGKKIAKHVQYSECLDMQPYMSEQNNKPLL-YTLYAVLVHA 292
Query: 305 GFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTF 364
GF+ SGHY++Y++ G WY ND+ V+ L + Y+LF+++ + ++G
Sbjct: 293 GFTSHSGHYFSYVRAGDGHWYKMNDNKVTACDRTSALIQDAYVLFYVQRSNLETDSSGMS 352
Query: 365 ASNGVKSHEN 374
A K+ E+
Sbjct: 353 ADTKAKTLES 362
>gi|413952907|gb|AFW85556.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 903
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 122/327 (37%), Positives = 185/327 (56%), Gaps = 26/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+CYLNSVLQCLTYT P A + +H+S C+ S C C L+
Sbjct: 91 GLENLGNTCYLNSVLQCLTYTEPFAAYLQSGKHTSSCRT----SGF-------CALCALQ 139
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ +L + P +I LR + F+ RQEDAHE + ++++ H CL
Sbjct: 140 IHVKTALESTGKIVTPFRIVKNLRCISRTFRNSRQEDAHELMVNLLESMHKCCL------ 193
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G S+ + S+V +IFGG L+SQVKC C SNK D +D+SL+I +
Sbjct: 194 -PSGVSTESQSAYD-----KSLVHKIFGGRLRSQVKCTRCLHCSNKFDPFLDLSLEIAKA 247
Query: 208 CSLKEAMQKFFQPEVLD-GNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFG- 265
+L A++ F + E+LD G +Y+C+ C++ V A+K+++I ++PN+L I LKRF
Sbjct: 248 TTLVRALENFTEDELLDEGQKEYECERCRQKVVAKKRLTIDKAPNVLTIHLKRFSPFNPR 307
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KIDK + F+ +L L F+ S+ +Y L+G +VH+G+S SGHYY Y++ + G W+
Sbjct: 308 EKIDKKVDFQSILDLKPFVSD-SKGTDFKYSLYGVLVHTGWSTQSGHYYCYVRTSSGMWH 366
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIR 352
+D V +VL +K Y+LF++R
Sbjct: 367 NLDDKEVRQVREADVLKQKAYMLFYVR 393
>gi|5734755|gb|AAD50020.1|AC007651_15 Unknown protein [Arabidopsis thaliana]
Length = 891
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 133/335 (39%), Positives = 188/335 (56%), Gaps = 26/335 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N+VLQ LT T PL + L+ HS C K C C
Sbjct: 404 PRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSG-----------KDWCLMCE 452
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
LE+ ++ L A ++I S +R G QEDAHEFLR ++ + + CL
Sbjct: 453 LEQHVMMLRESGGPLSA-SRILSHMRSINCQIGDGSQEDAHEFLRLLVASMQSICLE--- 508
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
R GG + ET ++V+ +FGG L+S+VKCL C ES + + IMD++L+I
Sbjct: 509 --RLGGETKVDPRLQET-----TLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIY 561
Query: 206 NSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
SL++A+ +F +PE LDG N Y+C C V ARK++SI ++PNIL I LKRF+
Sbjct: 562 GWVESLQDALTQFTRPEDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQEGR 621
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH--SGFSPDSGHYYAYIKDAIG 322
GKI+K I+F E+L + FM + P P Y L+ IVH + + SGHY +Y+KD G
Sbjct: 622 YGKINKCISFPEMLDMIPFMTRTGDVP-PLYMLYAVIVHLDTLNASFSGHYISYVKDLRG 680
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
WY +DS + + +V+SE Y+LF++R+ RP
Sbjct: 681 NWYRIDDSEIHPVPMTQVMSEGAYMLFYMRSYPRP 715
>gi|222635089|gb|EEE65221.1| hypothetical protein OsJ_20367 [Oryza sativa Japonica Group]
Length = 940
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 181/327 (55%), Gaps = 26/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CYLNSVLQCLTYT P A + +H S C+ C C L+
Sbjct: 101 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGF-----------CALCALQ 149
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ +L + P++I LR + F+ RQEDAHE + ++++ H CL
Sbjct: 150 NHVKTALQSTGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCL------ 203
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G S E S+V +IFGG L+SQVKC C SNK D +D+SLDI +
Sbjct: 204 -PSGVPSESPSAYE-----KSLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKA 257
Query: 208 CSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF-G 265
SL A+Q F E+LDG K Y+C C+K V A+K+ +I ++P +L I LKRF
Sbjct: 258 TSLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPR 317
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KIDK + F+ +L L F+ S+ +Y L+G +VH+G++ SGHYY +++ + G W+
Sbjct: 318 EKIDKKVDFQPMLDLKPFISD-SKGADFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWH 376
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ V +VL +K Y+LF++R
Sbjct: 377 NLDDNQVRQVREADVLRQKAYMLFYVR 403
>gi|359495665|ref|XP_003635052.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Vitis
vinifera]
Length = 942
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 140/401 (34%), Positives = 212/401 (52%), Gaps = 46/401 (11%)
Query: 1 MGLAHELQM---SWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLK 57
M +EL M SW+ LS P GL N GNSCY N+VLQCLT+T PLA++ L+
Sbjct: 376 MLFPYELFMELYSWEKVELS--------PFGLMNCGNSCYANAVLQCLTFTRPLASYLLQ 427
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
HS C ++ C C E I+ + L +P I S ++ H
Sbjct: 428 GLHSKACP-----------KEDWCFICEFECLILEAREGKSPL-SPMGILSQIQRIGSHL 475
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
GR+EDAHEFLRY +D + CL K G G + +++V FGG
Sbjct: 476 GHGREEDAHEFLRYAVDTMQSVCL-------KDTGVVG------PLAEDTTLVGLTFGGY 522
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKK 236
L S++KC+ C +S + + +MD++++I +L+EA+ +F E+LDG NKY+C C+
Sbjct: 523 LLSKIKCMKCQGKSERCERMMDLTVEIDGDIGTLEEALAQFTATEILDGENKYQCGRCRS 582
Query: 237 LVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYK 296
A+K++ +L++PNIL I LKRF+ GK++K++ F E L L+ +M + D P Y
Sbjct: 583 YEKAKKKLMVLEAPNILTIVLKRFQSSNFGKLNKSVRFPETLNLTPYM-SGTDDRYPVYS 641
Query: 297 LFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRAN 354
L+ +VH + SGHY ++K+ +G W+ +DS V+ L VL E Y+L + R +
Sbjct: 642 LYAVVVHLDIMNAAFSGHYVCFVKNFLGDWFRIDDSTVTPVELDRVLLEGAYMLLYARRS 701
Query: 355 QRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKAVATKP 395
+P + + N SHE GK + ++ VP ATKP
Sbjct: 702 PKPPA----LSRNMAVSHE-GKLKMRNLEA-VPSSLAATKP 736
>gi|358055232|dbj|GAA99001.1| hypothetical protein E5Q_05690 [Mixia osmundae IAM 14324]
Length = 601
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 128/370 (34%), Positives = 190/370 (51%), Gaps = 30/370 (8%)
Query: 3 LAHELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQ-HS 61
+A + +SW +R R GP G N+GN+C+LNS LQ L +T PL + HS
Sbjct: 159 IARGISLSW------PRRVRVGP--GFNNVGNTCFLNSALQVLVHTAPLVSALTGTHWHS 210
Query: 62 SLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGR 121
LTG R + C C+++ I R + P L+ A+HF+ GR
Sbjct: 211 ERTCYLTG-------RSQFCLVCVMQDLINRCFGQSRSPLTPRGFTDNLKRIAKHFRLGR 263
Query: 122 QEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQ 181
QED+HE LR+VID L +G ++++ IFGG L+S+
Sbjct: 264 QEDSHELLRFVIDGMQQHEL------------AGVPPDALKARRDTTMIHRIFGGKLRSR 311
Query: 182 VKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSAR 241
V C CG S+ + +D+SLDI L++A+++FFQP+ L G NKYKC+ C ++V A
Sbjct: 312 VLCNKCGHASDTFESFLDLSLDIQGLDHLRDALRRFFQPDDLRGQNKYKCEACTRMVEAT 371
Query: 242 KQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTI 301
KQ +I P +L + LKRF + G KI ++I F+E L L + Y+L+G +
Sbjct: 372 KQYTIQSPPQVLTLHLKRFTPL-GKKIGRSIGFDEDLNLGRHTSE-DHGKGLRYRLYGIV 429
Query: 302 VHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSAN 361
H+G P SGHY A+++D++G W +DS+VS S S Y+LF+ R + N
Sbjct: 430 HHAGGGPQSGHYIAHVRDSVGSWNRMDDSHVSPSERMPRQSSTAYVLFYARDVSLSAAIN 489
Query: 362 GTFASNGVKS 371
G S+G S
Sbjct: 490 GASPSSGTPS 499
>gi|356509862|ref|XP_003523663.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 742
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 158/449 (35%), Positives = 226/449 (50%), Gaps = 54/449 (12%)
Query: 21 KRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
K G PP GL N GNSC+ N VLQCL++T PL F L+ H C
Sbjct: 172 KPGFPPCGLLNCGNSCFANVVLQCLSFTRPLIAFLLEKGHHRECCH-----------NDW 220
Query: 81 CPFCILEKRIVRSLSVDLTLDA--PAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHN 138
C C E + + V L+ A P I S L + GRQEDAHEF+R+ IDA +
Sbjct: 221 CFLCEFETHVEK---VRLSSQAFSPMNILSRLPNISGTLGYGRQEDAHEFMRFSIDAMQS 277
Query: 139 TCLRLKKLRRKGGGSSGGGGGGETI----NGGSSVVKEIFGGALQSQVKCLACGAESNKV 194
CL GGE + N +++++ IFGG LQS+V C C SN+
Sbjct: 278 VCL--------------DEFGGEKVVPPRNQETTLIQHIFGGHLQSEVICTECEKNSNQY 323
Query: 195 DEIMDISLDIL-NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
+ +MD++++I ++ SL+E + +F E L G+N YKCD CK V A K++++ Q+PNIL
Sbjct: 324 ENMMDLTVEIHGDAASLEECLDQFTAKEWLHGDNMYKCDGCKGYVKAWKRLTVKQAPNIL 383
Query: 254 VIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--G 311
I LKRF+ GK++K + F E L LS +M + D YKL+ +VH S G
Sbjct: 384 TIALKRFQSGRFGKLNKRVTFPETLDLSPYMSEVG-DGSDIYKLYAVVVHIDMLNASFFG 442
Query: 312 HYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
HY YIKD G WY +D VS L+EVLS+ Y+L + R N RP +G++S
Sbjct: 443 HYICYIKDFCGNWYRIDDWKVSSVELEEVLSQGAYMLLYSRVNARP---------SGLQS 493
Query: 372 HENGKEA-YKGVKGTVPLKAVATKPSAEQSSRKTPSTISKVEKVPSNPRLKFSISGSSGC 430
E+ + A + +K VP T+ + S KT + E P + L+ + S C
Sbjct: 494 IESSETAEVQTIKSEVP--PGPTEQAECLSDMKTETYSGGCEAFPFDSSLELKV---SCC 548
Query: 431 KGVPPTS-NGKVNVHKSQSVKMNGVVKDS 458
+ V T N +V + + V + V +S
Sbjct: 549 ENVSLTEMNSEVKREQFKDVDIIDVANES 577
>gi|393216033|gb|EJD01524.1| cysteine proteinase [Fomitiporia mediterranea MF3/22]
Length = 775
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 132/356 (37%), Positives = 187/356 (52%), Gaps = 36/356 (10%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N GN+C+LNS LQCL +TPPL L + C+ +G C C ++
Sbjct: 180 GLFNQGNTCFLNSALQCLLHTPPLLRI-LMAHTKAECRVKSG----------FCMSCAMQ 228
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ S P I L A+H + GRQEDAHEFLRY ID+ +CL
Sbjct: 229 EVSSDSFKKGRAF-TPLPITRNLNSIAKHLRKGRQEDAHEFLRYAIDSLQKSCL------ 281
Query: 148 RKGGGSSGGGGGGETIN---GGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI 204
G I+ ++ V +IFGG L+S+V C CG S+ D I+D+S+DI
Sbjct: 282 ---------AGYPPKIDHKLAETTWVHKIFGGQLRSRVTCQQCGYNSDTFDSILDLSIDI 332
Query: 205 LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
N LKEA++KF + L G +KYKC+ CK+ V+A KQ +I ++P +L + LKRF +
Sbjct: 333 YNISGLKEALKKFTAKDYLKGADKYKCEKCKRPVNAEKQFTIHEAPAVLTVHLKRFTPM- 391
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRW 324
G K+ I ++EVL L M + P YKL+G I H G P+SGHY+A+++ G+W
Sbjct: 392 GRKLQHPIRYDEVLSLQPAMSEGQHGPT--YKLYGVISHMGGGPNSGHYFAHVRGGDGQW 449
Query: 325 YCCNDSYVSVSTLQEVLSEK-VYILFFIRANQRPVSA--NGTFASNGVKSHENGKE 377
Y ND V E L+ K Y+LF+IR ++A +G NG+ + KE
Sbjct: 450 YEMNDDSVERVHKPEPLNMKNAYMLFYIRQKGEALAAAVHGGGFVNGISLSKKRKE 505
>gi|296086860|emb|CBI33027.3| unnamed protein product [Vitis vinifera]
Length = 894
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 133/338 (39%), Positives = 184/338 (54%), Gaps = 26/338 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N+VLQCLT T PL + L+ HS C C C
Sbjct: 407 PRGLLNCGNSCYANAVLQCLTCTKPLIIYLLQRSHSRTCCVTNW-----------CLMCE 455
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
LEK ++ L +P++I S +R G QEDAHEFLR ++ + + CL
Sbjct: 456 LEKHVMMLRESGGPL-SPSRILSHMRSINCQIGDGSQEDAHEFLRLLVTSMQSICLE--- 511
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
+ GG ET + ++ FGG L+S+VKCL C ES + + IMD++L+I
Sbjct: 512 --KLGGEREVDARLQET-----TFIQHTFGGRLRSKVKCLRCHLESERYENIMDLTLEIF 564
Query: 206 NSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
SL++A+ +F PE LDG N Y+C C V ARKQ+SI ++PNIL I LKRF+
Sbjct: 565 GWVESLEDALTQFTTPEDLDGENMYRCRRCTTYVRARKQLSIHEAPNILTIVLKRFQEGR 624
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIG 322
GKI+K I F ++L + FM + D P Y L+ +VH + SGHY AY+KD G
Sbjct: 625 YGKINKCITFPDMLDMIPFM-TGTYDVPPLYMLYAVVVHMDTLNASFSGHYVAYVKDLQG 683
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSA 360
W+ +D+ V + +V+SE YILF++R+ RP A
Sbjct: 684 NWFRVDDAEVQPVSTNQVMSEGAYILFYMRSWPRPPRA 721
>gi|412989987|emb|CCO20629.1| predicted protein [Bathycoccus prasinos]
Length = 706
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 138/393 (35%), Positives = 211/393 (53%), Gaps = 69/393 (17%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
++QM WQ K G GL+NLGN+C+LN+VLQCLTYTP LANF L +H
Sbjct: 71 KIQMEWQTV-----SKIGS---GLQNLGNTCFLNAVLQCLTYTPALANFFLNNEHQKHKN 122
Query: 66 QLTGDSALDAERKRECPF---CILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQ 122
+G ++L F +++ ++ S + + A +++ +R ++ FK GRQ
Sbjct: 123 LSSGFNSL---------FEMGNLVKNTLIHSKNKHHAVPPTAFVKN-IRALSKTFKKGRQ 172
Query: 123 EDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGG----------SSVVKE 172
ED+HEF R ++D+ H C L ++ GSS G+ + ++ +
Sbjct: 173 EDSHEFARCLLDSMHKRCCMLGRV---DDGSSSNTRNGKKLTANAIDPESKEAETTFIWR 229
Query: 173 IFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCD 232
+FGG L+S V C +CG ES K+D MD+SL+ SL++A++ F + EVLDG+NKY+C+
Sbjct: 230 VFGGQLRSCVTCQSCGRESAKLDPCMDMSLECAKVKSLEQALKLFTRVEVLDGDNKYRCE 289
Query: 233 NCKKLVSARKQMSILQSPNILVIQLKRFEGI-FG-GKIDKAIAFEEVLVLSSFMC----- 285
CKKL A+KQ S+ ++PN+L IQLKRFE + FG GK+ + I + VL L+S++
Sbjct: 290 GCKKLSRAKKQFSVDKAPNVLQIQLKRFEFVPFGRGKLSQFIEYPLVLDLTSYLTSILKI 349
Query: 286 ----------------------------KASQDPQPEYKLFGTIVHSGFSPDSGHYYAYI 317
KA Y L G +VH+G S +SGHYY+Y+
Sbjct: 350 NGGRRGKKRSKSANNAVLDDIMGGSSTEKAFSSSSSVYDLIGVLVHAGSSMNSGHYYSYV 409
Query: 318 KDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
K G W+ +D V+ + + VL +K Y+LF+
Sbjct: 410 KAQNGFWFEMDDESVTNVSEKTVLRQKAYLLFY 442
>gi|242094960|ref|XP_002437970.1| hypothetical protein SORBIDRAFT_10g005680 [Sorghum bicolor]
gi|241916193|gb|EER89337.1| hypothetical protein SORBIDRAFT_10g005680 [Sorghum bicolor]
Length = 917
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/328 (37%), Positives = 183/328 (55%), Gaps = 28/328 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+CYLNSVLQCLTYT P A + +H S C+ S C C L+
Sbjct: 91 GLENLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRA----SGF-------CALCALQ 139
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ +L + P +I LR + F+ RQEDAHE + ++++ H CL
Sbjct: 140 NHVKTALESTGKIVTPFRIVKNLRCISRTFRNSRQEDAHELMVNLLESMHKCCL------ 193
Query: 148 RKGGGSSGGGGGGETING-GSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
G E+ + S+V +IFGG L+SQVKC C SNK D +D+SLDI
Sbjct: 194 -------PSGVPSESQSAYDKSLVHKIFGGRLRSQVKCTRCSHCSNKFDPFLDLSLDIAK 246
Query: 207 SCSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFG 265
+ +L A++ F + E+LDG K Y+C+ C++ V A+K+ +I ++PN+L I LKRF
Sbjct: 247 ATTLVRALENFTEDELLDGGQKQYQCERCRQKVVAKKRFTIDKAPNVLTIHLKRFSPFNP 306
Query: 266 -GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRW 324
KIDK + F+ L L F+ S+ +Y L+G +VH+G++ SGHYY +++ + G W
Sbjct: 307 REKIDKKVDFQPSLDLKPFVSD-SKGTDFKYSLYGVLVHTGWNTQSGHYYCFVRTSSGMW 365
Query: 325 YCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+ +D+ V +VL +K Y+LF++R
Sbjct: 366 HNLDDNKVRQVREADVLKQKAYMLFYVR 393
>gi|2739431|gb|AAB95194.1| hematopoietic-specific IL-2 deubiquitinating enzyme [Mus musculus]
Length = 545
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 188/347 (54%), Gaps = 31/347 (8%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
EL + +PSL E + GP GL+N GNSCYLN+ LQCLT+TPPLA++ L ++S C
Sbjct: 32 ELTANDKPSLSWECPQ--GPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCC 89
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
G C C +E + +SL + D Q F +H +QEDA
Sbjct: 90 SPEG-----------CKMCAMEAHVTQSLLHSHSGDVMKPSQILTSAFHKH----QQEDA 134
Query: 126 HEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
HEFL + ++ H +CL++ + E + SS + +IFGG +SQ+KCL
Sbjct: 135 HEFLMFTLETMHESCLQVHR-------------QSEPTSEDSSPIHDIFGGLWRSQIKCL 181
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
C S+ D +D+ LDI ++ S+ +A+ + E L G N Y C C++ + A K +
Sbjct: 182 HCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKSEELRGENAYYCGRCRQKMPASKTLH 241
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
I +P +L++ LKRF G K+D+ +++ E L L ++ + + P P Y L+ +VH G
Sbjct: 242 IHSAPKVLLLVLKRFSAFMGNKLDRKVSYPEFLDLKPYLSQPTGGPLP-YALYAVLVHEG 300
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+ SGHY++Y+K G WY +D+ V+ + VL+E Y+LF+++
Sbjct: 301 ATCHSGHYFSYVKARHGAWYKMDDTKVTSCDVTSVLNENAYVLFYVQ 347
>gi|2739433|gb|AAB94636.1| hematopoietic-specific IL-2 deubiquitinating enzyme [Mus musculus]
Length = 545
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 188/347 (54%), Gaps = 31/347 (8%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
EL + +PSL E + GP GL+N GNSCYLN+ LQCLT+TPPLA++ L ++S C
Sbjct: 32 ELTANDKPSLSWECPQ--GPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCC 89
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
G C C +E + +SL + D Q F +H +QEDA
Sbjct: 90 SPEG-----------CKMCAMEAHVTQSLLHSHSGDVMKPSQILTSAFHKH----QQEDA 134
Query: 126 HEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
HEFL + ++ H +CL++ + E + SS + +IFGG +SQ+KCL
Sbjct: 135 HEFLMFTLETMHESCLQVHR-------------QSEPTSEDSSPIHDIFGGLWRSQIKCL 181
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
C S+ D +D+ LDI ++ S+ +A+ + E L G N Y C C++ + A K +
Sbjct: 182 HCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKSEELRGENAYYCGRCRQKMPASKTLH 241
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
I +P +L++ LKRF G K+D+ +++ E L L ++ + + P P Y L+ +VH G
Sbjct: 242 IHSAPKVLLLVLKRFSAFMGNKLDRKVSYPEFLDLKPYLSQPTGGPLP-YALYAVLVHEG 300
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+ SGHY++Y+K G WY +D+ V+ + VL+E Y+LF+++
Sbjct: 301 ATCHSGHYFSYVKARHGAWYKMDDTKVTSCDVTSVLNENAYVLFYVQ 347
>gi|119964688|ref|NP_034219.3| deubiquitinating enzyme 2 [Mus musculus]
gi|148684713|gb|EDL16660.1| mCG122921 [Mus musculus]
gi|157169780|gb|AAI52900.1| Deubiquitinating enzyme 2 [synthetic construct]
Length = 545
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 188/347 (54%), Gaps = 31/347 (8%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
EL + +PSL E + GP GL+N GNSCYLN+ LQCLT+TPPLA++ L ++S C
Sbjct: 32 ELTANDKPSLSWECPQ--GPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCC 89
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
G C C +E + +SL + D Q F +H +QEDA
Sbjct: 90 SPEG-----------CKMCAMEAHVTQSLLHSHSGDVMKPSQILTSAFHKH----QQEDA 134
Query: 126 HEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
HEFL + ++ H +CL++ + E + SS + +IFGG +SQ+KCL
Sbjct: 135 HEFLMFTLETMHESCLQVHR-------------QSEPTSEDSSPIHDIFGGLWRSQIKCL 181
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
C S+ D +D+ LDI ++ S+ +A+ + E L G N Y C C++ + A K +
Sbjct: 182 HCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKSEELRGENAYYCGRCRQKMPASKTLH 241
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
I +P +L++ LKRF G K+D+ +++ E L L ++ + + P P Y L+ +VH G
Sbjct: 242 IHSAPKVLLLVLKRFSAFMGNKLDRKVSYPEFLDLKPYLSQPTGGPLP-YALYAVLVHEG 300
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+ SGHY++Y+K G WY +D+ V+ + VL+E Y+LF+++
Sbjct: 301 ATCHSGHYFSYVKARHGAWYKMDDTKVTSCDVTSVLNENAYVLFYVQ 347
>gi|115469288|ref|NP_001058243.1| Os06g0654000 [Oryza sativa Japonica Group]
gi|113596283|dbj|BAF20157.1| Os06g0654000, partial [Oryza sativa Japonica Group]
Length = 944
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/335 (38%), Positives = 184/335 (54%), Gaps = 25/335 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSC+ N VLQCL+ T PLA + L + HS C + D C C
Sbjct: 78 PCGLLNCGNSCFANVVLQCLSCTRPLAAYLLGMDHSRECYKRHED---------WCFLCE 128
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
L+ I R+ S + AP I S L + GRQEDAHEF+R+ ID + CL
Sbjct: 129 LQCHIQRA-SESMHPFAPKNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACLD--- 184
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
GG + +++++ IFGG LQSQV+C ACG SN+ + +MD++++I
Sbjct: 185 -------EFGGEKAVDPSTQETTLIQHIFGGRLQSQVQCTACGMVSNRYENMMDLTVEIH 237
Query: 206 -NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
++ SL+E + KF E LDG+NKYKCD C V A+K++++ Q+PNIL I LKRF+
Sbjct: 238 GDADSLEECLDKFTAVEWLDGDNKYKCDGCSDYVKAQKRLTVYQAPNILTITLKRFQSGR 297
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYIKDAIG 322
GK++K + F L L+ +M +S D +Y L+ +VH S GHY YIK+ G
Sbjct: 298 FGKLNKRVTFPMKLDLTPYM--SSTDGSDQYDLYAVVVHLDMLNASFFGHYICYIKNYRG 355
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
RWY +D V +EV ++ Y+L + R RP
Sbjct: 356 RWYKIDDCKVMAVDEEEVHAQGAYMLLYSRRTARP 390
>gi|255545936|ref|XP_002514028.1| conserved hypothetical protein [Ricinus communis]
gi|223547114|gb|EEF48611.1| conserved hypothetical protein [Ricinus communis]
Length = 1060
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/334 (36%), Positives = 192/334 (57%), Gaps = 27/334 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N+VLQCL +TPPL + ++ HS C K C C
Sbjct: 522 PCGLINCGNSCYANAVLQCLAFTPPLTAYFVQGLHSKECVN-----------KEWCFTCE 570
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
E ++++ L +P I S L+ A GR+EDAHEFLRY ID + CL+
Sbjct: 571 FESLMLKAKEGKSPL-SPIGILSQLQNIASQLGTGREEDAHEFLRYAIDTMQSVCLK--- 626
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
+ G ++ G ET +++ FGG L+S++KC+ C +S + + +MD++++I
Sbjct: 627 ---EAGVNALGSFEEET-----TLIGLTFGGYLRSKIKCMKCHYKSERHERMMDLTVEIE 678
Query: 206 NSCS-LKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
L++A+++F E+LDG+NKY+C CK A+K+++IL++PN+L I LKRF+
Sbjct: 679 GDIEKLEDALRRFTGTEILDGDNKYQCGRCKSYEKAKKKLTILEAPNVLTIALKRFQSGK 738
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIG 322
GK++K+I F E+L L+ +M + D P Y+L+G +VH + SGHY Y+K+
Sbjct: 739 FGKLNKSIRFPEILDLAPYM-SGTSDKSPIYRLYGVVVHLDIMNASFSGHYVCYVKNVQN 797
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
+W+ +DS V+ L+ VL++ Y+L + R + R
Sbjct: 798 KWFKIDDSTVTAVELERVLTKGAYMLLYARCSPR 831
>gi|125556320|gb|EAZ01926.1| hypothetical protein OsI_23952 [Oryza sativa Indica Group]
Length = 1079
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/335 (38%), Positives = 184/335 (54%), Gaps = 25/335 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSC+ N VLQCL+ T PLA + L + HS C + D C C
Sbjct: 213 PCGLLNCGNSCFANVVLQCLSCTRPLAAYLLGMDHSRECYKRHED---------WCFLCE 263
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
L+ I R+ S + AP I S L + GRQEDAHEF+R+ ID + CL
Sbjct: 264 LQCHIQRA-SESMHPFAPKNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACLD--- 319
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
GG + +++++ IFGG LQSQV+C ACG SN+ + +MD++++I
Sbjct: 320 -------EFGGEKAVDPSTQETTLIQHIFGGRLQSQVQCTACGMVSNRYENMMDLTVEIH 372
Query: 206 -NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
++ SL+E + KF E LDG+NKYKCD C V A+K++++ Q+PNIL I LKRF+
Sbjct: 373 GDADSLEECLDKFTAVEWLDGDNKYKCDGCSDYVKAQKRLTVYQAPNILTITLKRFQSGR 432
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYIKDAIG 322
GK++K + F L L+ +M +S D +Y L+ +VH S GHY YIK+ G
Sbjct: 433 FGKLNKRVTFPMKLDLTPYM--SSTDGSDQYDLYAVVVHLDMLNASFFGHYICYIKNYRG 490
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
RWY +D V +EV ++ Y+L + R RP
Sbjct: 491 RWYKIDDCKVMAVDEEEVHAQGAYMLLYSRRTARP 525
>gi|356502067|ref|XP_003519843.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Glycine
max]
Length = 938
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 193/351 (54%), Gaps = 34/351 (9%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N+VLQCL YT PL ++ + HS C ++K C C
Sbjct: 413 PFGLTNCGNSCYANAVLQCLAYTRPLTSYLFQGFHSKRC-----------QKKGWCFTCE 461
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
E +++ ++ +P I S + H GR+EDAHEFLR V+D + CL+
Sbjct: 462 FE-YLIQKAKEGISPLSPIGILSKIHKIGSHLGRGREEDAHEFLRCVVDTMQSICLK--- 517
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
G + +++V FGG L+S++KCL C +S + + +MD++++I
Sbjct: 518 ----------EVGVSSPLAEETTLVSYTFGGYLRSKIKCLRCLGKSERYERMMDLTVEID 567
Query: 206 NSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
+L+EA+ +F PE+LD +NKY C CK V ARK++++L++PNIL I LKRF+
Sbjct: 568 GDIGTLEEALGQFTAPEILDKDNKYNCSRCKTYVKARKKLTVLEAPNILTIVLKRFQSGN 627
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF----SPDSGHYYAYIKDA 320
K++K++ F EVL ++ +M ++D P Y L+ +VH + SGHY Y+K+
Sbjct: 628 FEKLNKSVQFPEVLNMAPYM-SGTKDKSPLYSLYAVVVHLDLDIMNAAFSGHYVCYVKNI 686
Query: 321 IGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
G W+ +DS V L VLSE+ Y+L + R + +P+ G +SN + S
Sbjct: 687 QGEWFRTDDSRVEPVELSRVLSERAYMLLYARHSPKPL---GLVSSNVISS 734
>gi|125598076|gb|EAZ37856.1| hypothetical protein OsJ_22202 [Oryza sativa Japonica Group]
Length = 995
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 130/335 (38%), Positives = 184/335 (54%), Gaps = 25/335 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSC+ N VLQCL+ T PLA + L + HS C + D C C
Sbjct: 129 PCGLLNCGNSCFANVVLQCLSCTRPLAAYLLGMDHSRECYKRHED---------WCFLCE 179
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
L+ I R+ S + AP I S L + GRQEDAHEF+R+ ID + CL
Sbjct: 180 LQCHIQRA-SESMHPFAPKNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACLD--- 235
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
GG + +++++ IFGG LQSQV+C ACG SN+ + +MD++++I
Sbjct: 236 -------EFGGEKAVDPSTQETTLIQHIFGGRLQSQVQCTACGMVSNRYENMMDLTVEIH 288
Query: 206 -NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
++ SL+E + KF E LDG+NKYKCD C V A+K++++ Q+PNIL I LKRF+
Sbjct: 289 GDADSLEECLDKFTAVEWLDGDNKYKCDGCSDYVKAQKRLTVYQAPNILTITLKRFQSGR 348
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYIKDAIG 322
GK++K + F L L+ +M +S D +Y L+ +VH S GHY YIK+ G
Sbjct: 349 FGKLNKRVTFPMKLDLTPYM--SSTDGSDQYDLYAVVVHLDMLNASFFGHYICYIKNYRG 406
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
RWY +D V +EV ++ Y+L + R RP
Sbjct: 407 RWYKIDDCKVMAVDEEEVHAQGAYMLLYSRRTARP 441
>gi|51535049|dbj|BAD37420.1| putative ubiquitin-specific protease 15 [Oryza sativa Japonica
Group]
gi|51535599|dbj|BAD37542.1| putative ubiquitin-specific protease 15 [Oryza sativa Japonica
Group]
Length = 1069
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 130/335 (38%), Positives = 184/335 (54%), Gaps = 25/335 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSC+ N VLQCL+ T PLA + L + HS C + D C C
Sbjct: 203 PCGLLNCGNSCFANVVLQCLSCTRPLAAYLLGMDHSRECYKRHED---------WCFLCE 253
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
L+ I R+ S + AP I S L + GRQEDAHEF+R+ ID + CL
Sbjct: 254 LQCHIQRA-SESMHPFAPKNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACLD--- 309
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
GG + +++++ IFGG LQSQV+C ACG SN+ + +MD++++I
Sbjct: 310 -------EFGGEKAVDPSTQETTLIQHIFGGRLQSQVQCTACGMVSNRYENMMDLTVEIH 362
Query: 206 -NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
++ SL+E + KF E LDG+NKYKCD C V A+K++++ Q+PNIL I LKRF+
Sbjct: 363 GDADSLEECLDKFTAVEWLDGDNKYKCDGCSDYVKAQKRLTVYQAPNILTITLKRFQSGR 422
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYIKDAIG 322
GK++K + F L L+ +M +S D +Y L+ +VH S GHY YIK+ G
Sbjct: 423 FGKLNKRVTFPMKLDLTPYM--SSTDGSDQYDLYAVVVHLDMLNASFFGHYICYIKNYRG 480
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
RWY +D V +EV ++ Y+L + R RP
Sbjct: 481 RWYKIDDCKVMAVDEEEVHAQGAYMLLYSRRTARP 515
>gi|339245907|ref|XP_003374587.1| ubiquitin carboxyl- hydrolase family protein [Trichinella spiralis]
gi|316972184|gb|EFV55872.1| ubiquitin carboxyl- hydrolase family protein [Trichinella spiralis]
Length = 918
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 144/438 (32%), Positives = 219/438 (50%), Gaps = 58/438 (13%)
Query: 5 HELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHS-SL 63
H+L+++W +E + G +GL+NLGN+C++NSVLQ LT TPP+AN+ +H L
Sbjct: 151 HKLKLTWN----AENQSSTG--VGLQNLGNTCFMNSVLQVLTNTPPMANYLTSGEHGRQL 204
Query: 64 CKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQE 123
C G A+ A R KR+ + + +P I +R + GRQE
Sbjct: 205 CPGTNGFCAICALRSHV-------KRVFAAAKSNSGSFSPTHIAQHIRCVMKSHSHGRQE 257
Query: 124 DAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVK 183
DAHEFLRY +DA N L + G + +S++ IFGG +SQ+
Sbjct: 258 DAHEFLRYFVDAMQNAALFPYR-----------GRNLDIFTQETSIISRIFGGFHRSQIV 306
Query: 184 CLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C C S D +D+SL+I +++ AM + + E L ++ Y C CK+ VSARK
Sbjct: 307 CNNCQYVSVIYDPFLDLSLEIKQWNTVEHAMAHYTKMETLSNDDAYNCPRCKRRVSARKI 366
Query: 244 MSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH 303
++I +PN+L I LKRF+ GKID+ I + + + L FM + Q P Y+L+G ++H
Sbjct: 367 LTIHSAPNVLTIHLKRFDHF--GKIDRHIGYSDRMNLRPFMTE-KQGPPVNYRLYGVVIH 423
Query: 304 SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRAN--------- 354
+G S +SGHYYA++ + +G+W+ +DS V + + L Y+LF++R
Sbjct: 424 NGRSTNSGHYYAFVCNPLGQWHLMDDSRVCPVSSESALKASAYVLFYVRVTTPTATVKPQ 483
Query: 355 --------QRPVSANGTFASNGV-------KSHENGKEAYKGVKGTVPLKAVATKPSAEQ 399
Q PVSA N + + EN K ++ + K V T SA
Sbjct: 484 AKLDIHPVQPPVSATTNIVKNKICLFKPRSVTVENN---IKPLQINLKHKVVVTNGSALS 540
Query: 400 SS---RKTPSTISKVEKV 414
+S R+ SKVEKV
Sbjct: 541 NSKMKRQDAGDSSKVEKV 558
>gi|379030633|ref|NP_001243801.1| inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 8
[Homo sapiens]
gi|187653909|sp|P0C7I0.1|U17L8_HUMAN RecName: Full=Inactive ubiquitin carboxyl-terminal hydrolase
17-like protein 8
Length = 530
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 185/328 (56%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CYLN+ LQCLTYTPPLAN+ L +HS C +R + C C ++
Sbjct: 81 GLQNMGNTCYLNASLQCLTYTPPLANYMLSREHSQTC-----------QRPKCCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I +L +P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITWALH------SPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+K+A+++ +PE L+G N Y C C + A +++ S +L++ LKRF + G K
Sbjct: 231 QSVKQALEQLVKPEELNGENAYPCGLCLQRAPASNTLTLHTSAKVLILVLKRFCDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + +M + + P Y L+ +VH+G+S +G+Y++Y+K G+WY
Sbjct: 291 LAKNVQYPECLDMQPYMSQQNTGPL-VYVLYAVLVHAGWSCHNGYYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ ++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTACSITSVLSQQAYVLFYIQKSE 377
>gi|109085555|ref|XP_001084204.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Macaca mulatta]
Length = 529
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 183/328 (55%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+G++CY+N+ LQCLTYTPPLAN+ L +HS LC + C C +E
Sbjct: 81 GLQNMGDTCYVNASLQCLTYTPPLANYMLSREHSQLC-----------HCHKSCMLCTME 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I +L P + + A F G+QEDAHEFL +++DA CL
Sbjct: 130 AHITWAL------HCPGHVIQPSQTLAAGFHRGKQEDAHEFLMFIVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIRAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+K+A+++ +PE L+G N Y C C + A K ++ S +L++ LKRF + G K
Sbjct: 231 QSVKQALEQVVKPEELNGENAYHCGLCLQKAPASKTFTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + +M + + P Y L+ +VH+G+S +GHY +++K G+WY
Sbjct: 291 LAKNVQYPECLDMQPYMSQQNTGPL-VYVLYAVLVHAGWSCHNGHYLSFVKAPGGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ ++ VLS++ Y+LF+I+ +Q
Sbjct: 350 DDAKVTACSIASVLSQQAYVLFYIQKSQ 377
>gi|224084576|ref|XP_002307344.1| predicted protein [Populus trichocarpa]
gi|222856793|gb|EEE94340.1| predicted protein [Populus trichocarpa]
Length = 325
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 125/331 (37%), Positives = 190/331 (57%), Gaps = 29/331 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPF-C 84
P GL N GNSCY N+VLQCL +TPPL +F ++ HS C REC F C
Sbjct: 20 PCGLINCGNSCYANAVLQCLAFTPPLTSFFVQGLHSKSC------------LNRECCFSC 67
Query: 85 ILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLK 144
E I+++ L +P I S L+ GR+EDAHEFLRY IDA + CL+
Sbjct: 68 EFESIILKAKEGKSPL-SPLGILSQLQNIGSQLGNGREEDAHEFLRYAIDAMQSVCLK-- 124
Query: 145 KLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI 204
G ++ ++++ FGG L S++KC+ C +S + + +MD++++I
Sbjct: 125 ---------EAGVNAMDSFAEETTLIGLTFGGYLHSKIKCMKCHYKSERQERMMDLTVEI 175
Query: 205 L-NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI 263
N L++A+++F E+LDG+NKY+C CK A+K+M+IL++PN+L I LKRF+
Sbjct: 176 EGNIGKLEDALRRFTSAEILDGDNKYQCGRCKSYEKAKKKMTILEAPNVLTIALKRFQSG 235
Query: 264 FGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAI 321
GK++K+I F E+L L+ +M + D P Y+L+G IVH + SGHY Y+K+
Sbjct: 236 KFGKLNKSIRFPEILDLAPYM-SGTSDKSPIYRLYGVIVHLDVMNAAFSGHYVCYVKNIQ 294
Query: 322 GRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+W+ +DS V+ L+ VLS+ Y+L + R
Sbjct: 295 NKWFKIDDSTVTAVELERVLSKGAYMLLYAR 325
>gi|330822492|ref|XP_003291685.1| hypothetical protein DICPUDRAFT_6348 [Dictyostelium purpureum]
gi|325078121|gb|EGC31790.1| hypothetical protein DICPUDRAFT_6348 [Dictyostelium purpureum]
Length = 328
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 133/327 (40%), Positives = 181/327 (55%), Gaps = 26/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N+GN+C++NSVLQCLTY+ LAN+ + +HS C K C FC LE
Sbjct: 26 GLYNIGNTCFMNSVLQCLTYSSALANYMISGEHSKNCT-----------NKSFCVFCSLE 74
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I+ S P I + A F+ GRQED+HEF +VID+ CL
Sbjct: 75 IHIIASHQATGKSITPLVIAKNIEKVAPTFRIGRQEDSHEFFCFVIDSLQKVCL------ 128
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+ G + ++V+ IFGG L+SQVKC C ESN DE MD+ ++I +
Sbjct: 129 -----AKFPKGSISPRDSMTTVIGSIFGGYLRSQVKCTVCQYESNTFDEFMDLCVEINQA 183
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI--FG 265
SL + +Q F +PE+LDG N YKC CKKLV A K + I SP +L +Q+KRF + +G
Sbjct: 184 NSLTKGLQNFVKPEILDGENGYKCKKCKKLVKAEKSLQIEISPPVLTVQIKRFSFLNSYG 243
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
GK +K I F + L LS +M + + Y L +VH G S +SGHYY Y+K + G WY
Sbjct: 244 GKDNKHIQFCQTLDLSPYMTQT--NDHSIYDLNSVLVHLGDSTNSGHYYCYVKGSNGVWY 301
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIR 352
+DS VS +LQ VL K Y+LF+ +
Sbjct: 302 KMDDSMVSQVSLQTVLRSKAYMLFYTK 328
>gi|218191741|gb|EEC74168.1| hypothetical protein OsI_09271 [Oryza sativa Indica Group]
Length = 1156
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 119/331 (35%), Positives = 182/331 (54%), Gaps = 26/331 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N GN+CYLNSVLQCLTYT P + +H S C+ + C C L+
Sbjct: 86 GLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSCRTIGF-----------CALCALQ 134
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ + +L + P I LR + F+ RQEDAHE + ++++ H CL
Sbjct: 135 RHVNSALQSTGKILRPVHIVRNLRCISRSFRISRQEDAHELMVRLLESMHKCCL------ 188
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G SG E S+V IFGG L+SQV+C C SNK D +D+SL+I N+
Sbjct: 189 -PSGVPSGSPSAYE-----KSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEIANA 242
Query: 208 CSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFG- 265
+L +A+Q F E+LDG K Y C++C++ V A+K+ I ++P++L I LKRF
Sbjct: 243 ATLVKALQHFTAEELLDGGEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFSPFNPC 302
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KIDK + F+ L L ++ + + +Y L+G +VH+G++ SGHYY +++ + G W+
Sbjct: 303 HKIDKKVQFQPTLNLKPYVSNP-EGMEFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGIWH 361
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
+D+ V +VL +K Y+LF++R R
Sbjct: 362 NLDDNEVYQVREADVLRQKAYMLFYVRDRTR 392
>gi|428166280|gb|EKX35258.1| hypothetical protein GUITHDRAFT_79938, partial [Guillardia theta
CCMP2712]
Length = 347
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 124/334 (37%), Positives = 187/334 (55%), Gaps = 28/334 (8%)
Query: 24 GPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLT--GDSALDAERKREC 81
GP GL N+GN+C+ N+VLQCLTYTPPLAN C +HS K++T G DA ++
Sbjct: 36 GP--GLLNVGNTCFCNAVLQCLTYTPPLANLCKAQEHS---KRITRDGQGKFDALKE--- 87
Query: 82 PFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL 141
+E+ I+ S + P+ I + R + GRQEDAHEF R +++A H L
Sbjct: 88 ----VERHIITSSRCTQGVLKPSNIVNSFRKIGARLRLGRQEDAHEFTRLLMEAMHLADL 143
Query: 142 RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDIS 201
+ + G +V IFGG L+SQV+C C SN D +D+S
Sbjct: 144 AACRFTESPYSRAAQTG----------LVHGIFGGHLRSQVRCETCRYNSNTYDAFLDLS 193
Query: 202 LDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE 261
L+I + ++ +A++ F +PE+LDGNNKYKC +C A K+ S+ ++P +L + LKRFE
Sbjct: 194 LEIKKADNITDALRLFTKPEILDGNNKYKCSHCGCKTRATKRFSVHRAPLVLQLHLKRFE 253
Query: 262 GIFGG---KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIK 318
+ G K+ K + FE+ L L +M + + Y L+G +VHSG S SGHYYA++K
Sbjct: 254 TSWSGNSCKLSKHVMFEQTLQLDPYMSEG-EKAGSRYNLYGVVVHSGHSMKSGHYYAFVK 312
Query: 319 DAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
++ G WY +D V + V ++ Y+LF+++
Sbjct: 313 NSNGVWYEMDDDSVRQVSYSAVARQQAYMLFYVQ 346
>gi|119613077|gb|EAW92671.1| hCG1807742 [Homo sapiens]
Length = 314
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 182/324 (56%), Gaps = 31/324 (9%)
Query: 32 LGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIV 91
+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++ I
Sbjct: 1 MGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKGCMLCTMQAHIT 49
Query: 92 RSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGG 151
R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 50 RAL------HNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACL---------- 93
Query: 152 GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLK 211
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI + S++
Sbjct: 94 ---PGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQ 150
Query: 212 EAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKA 271
+A+++ +PE L+G N Y C C + A K +++ S +L++ LKRF + G KI K
Sbjct: 151 QALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKN 210
Query: 272 IAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSY 331
+ + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY +D+
Sbjct: 211 VQYPECLDMQPYMSQQNTGPLV-YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAE 269
Query: 332 VSVSTLQEVLSEKVYILFFIRANQ 355
V+ S++ VLS++ Y+LF+I+ ++
Sbjct: 270 VTASSITSVLSQQAYVLFYIQKSE 293
>gi|308808989|ref|XP_003081804.1| putative ubiquitin-specific protease (ISS) [Ostreococcus tauri]
gi|116060271|emb|CAL55607.1| putative ubiquitin-specific protease (ISS) [Ostreococcus tauri]
Length = 688
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 131/369 (35%), Positives = 201/369 (54%), Gaps = 44/369 (11%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
+++MSW + +R G GL NLGN+C+LNSVLQCLT+TP LA+F L +H K
Sbjct: 110 DVRMSWFGA------RRAG--AGLANLGNTCFLNSVLQCLTHTPALAHFALSGEH----K 157
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
+ + +A + + + R+L+ AP + +R ++ F+ GRQEDA
Sbjct: 158 KYKTSGSFNA-------MYEIGEHVARALNSSGRTIAPTAVVKNMRALSKTFRKGRQEDA 210
Query: 126 HEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
HE R ++DA H C+ L K + S GET S V ++FGG L+S+V C
Sbjct: 211 HELARCLLDAMHKKCVELVKPK-----ISPNSARGET-----SFVWKVFGGKLRSRVNCK 260
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCK------KLVS 239
CG S D +D+SL++ + S+ A + F E+LDG+NKYKC+
Sbjct: 261 TCGRNSETFDPFLDLSLEVGRAKSVLGAFKLFTHTEILDGDNKYKCEGKNPGQSKPHFTK 320
Query: 240 ARKQMSILQSPNILVIQLKRFEGI-FG-GKIDKAIAFEEVLVLSSFMCKASQDPQPE--Y 295
A KQ ++ Q+PN+L +QLKRF + FG GK+ + + VL ++ ++ ++ + Y
Sbjct: 321 ASKQFTVDQAPNVLAVQLKRFAYVPFGRGKLSHFVEYPLVLDVTPYLSDEDRNSKNRAVY 380
Query: 296 KLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQ 355
L+G +VH+G S +SGHYY ++K A G W +D VS + + VL ++ Y+LF+ R N
Sbjct: 381 DLYGVLVHAGSSSNSGHYYCFVKTATGTWCEMDDESVSSVSEKTVLKQQAYLLFYARRN- 439
Query: 356 RPVSANGTF 364
A GTF
Sbjct: 440 ----APGTF 444
>gi|297679837|ref|XP_002817723.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Pongo abelii]
Length = 1176
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 164/274 (59%), Gaps = 14/274 (5%)
Query: 81 CPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
C C ++ I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA C
Sbjct: 13 CMMCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKAC 72
Query: 141 LRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDI 200
L G + +++V +IFGG L+S+VKCL C S+ D +DI
Sbjct: 73 L-------------NGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDI 119
Query: 201 SLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF 260
+L+I + S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF
Sbjct: 120 TLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRF 179
Query: 261 EGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDA 320
GGKI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK +
Sbjct: 180 ANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKAS 238
Query: 321 IGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRAN 354
G WY NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 239 NGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSH 272
>gi|115449203|ref|NP_001048381.1| Os02g0795000 [Oryza sativa Japonica Group]
gi|47497222|dbj|BAD19267.1| putative hematopoietic-specific IL-2 deubiquitinating enzyme [Oryza
sativa Japonica Group]
gi|113537912|dbj|BAF10295.1| Os02g0795000 [Oryza sativa Japonica Group]
Length = 1185
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 119/331 (35%), Positives = 182/331 (54%), Gaps = 26/331 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N GN+CYLNSVLQCLTYT P + +H S C+ + C C L+
Sbjct: 87 GLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSCRTIGF-----------CALCALQ 135
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ + +L + P I LR + F+ RQEDAHE + ++++ H CL
Sbjct: 136 RHVNSALQSTGKILRPVHIVRNLRCISRSFRISRQEDAHELMVSLLESMHKCCL------ 189
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G SG E S+V IFGG L+SQV+C C SNK D +D+SL+I N+
Sbjct: 190 -PSGVPSGSPSAYE-----KSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEIANA 243
Query: 208 CSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFG- 265
+L +A+Q F E+LDG K Y C++C++ V A+K+ I ++P++L I LKRF
Sbjct: 244 ATLVKALQHFTAEELLDGGEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFSPFNPR 303
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KIDK + F+ L L ++ + + +Y L+G +VH+G++ SGHYY +++ + G W+
Sbjct: 304 HKIDKKVQFQPTLNLKPYVSNP-EGMEFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGIWH 362
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
+D+ V +VL +K Y+LF++R R
Sbjct: 363 NLDDNKVYQVREADVLRQKAYMLFYVRDRTR 393
>gi|332244569|ref|XP_003271445.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
6-like [Nomascus leucogenys]
Length = 399
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 115/332 (34%), Positives = 184/332 (55%), Gaps = 33/332 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKCCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRAL------HRPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMRKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGYKQVDPHSKDTTLIHQIFGGYWRSQIKCLHCQGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+K+A+++ +PE L+G N Y C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVKQALEQLVKPEELNGENAYHCGLCLQKAPASKTLTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY
Sbjct: 291 LAKNVQYPECLDMQPYMSQQNTGPL-VYVLYAVLVHAGWSGHNGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ--RP 357
+ V+ S + VLS++ Y LF+I+ ++ RP
Sbjct: 350 DGDQVTASGITSVLSQQAYDLFYIQNSELGRP 381
>gi|219519282|gb|AAI45059.1| Dub1a protein [Mus musculus]
gi|223460645|gb|AAI37943.1| Dub1a protein [Mus musculus]
Length = 467
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 177/331 (53%), Gaps = 29/331 (8%)
Query: 24 GPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPF 83
GP GL+N GNSCYLN+ LQCLT+TPPLA++ L +HS C G C
Sbjct: 47 GPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEG-----------CKM 95
Query: 84 CILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
C +E + +SL + D Q I F +QEDAHEFL + ++ H +CL++
Sbjct: 96 CAMEAHVTQSLLHTHSGDVMKPSQ----ILTSAFHKRKQEDAHEFLMFTLETMHESCLQV 151
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
+ E + SS + +IFGG +SQ+KC C S D +DI LD
Sbjct: 152 HR-------------QSEPTSEDSSPIHDIFGGWWRSQIKCHHCQGTSYSYDPFLDIPLD 198
Query: 204 ILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI 263
I + S+K+A+Q + E L G N Y C C++ A K + + +P +L++ LKRF G
Sbjct: 199 ISSVQSVKQALQDTEKAEELCGENSYYCGRCRQKKPASKTLKLYSAPKVLMLVLKRFSGS 258
Query: 264 FGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR 323
G K+D+ +++ E L L ++ + + P P Y L+ +VH G + SGHY+ +K G+
Sbjct: 259 MGKKLDRKVSYPEFLDLKPYLSQPTGGPLP-YALYAVLVHEGATCHSGHYFCCVKAGHGK 317
Query: 324 WYCCNDSYVSVSTLQEVLSEKVYILFFIRAN 354
WY +D+ V+ + VL+E Y+LF+++ N
Sbjct: 318 WYKMDDTKVTSCDVTSVLNENAYVLFYVQQN 348
>gi|301762222|ref|XP_002916532.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like
[Ailuropoda melanoleuca]
Length = 1186
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 164/274 (59%), Gaps = 14/274 (5%)
Query: 81 CPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
C C ++ I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA C
Sbjct: 12 CMMCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKAC 71
Query: 141 LRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDI 200
L G + +++V +IFGG L+S+VKCL C S+ D +DI
Sbjct: 72 L-------------NGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDI 118
Query: 201 SLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF 260
+L+I + S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF
Sbjct: 119 TLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRF 178
Query: 261 EGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDA 320
GGKI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK +
Sbjct: 179 ANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKAS 237
Query: 321 IGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRAN 354
G WY NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 238 NGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSH 271
>gi|255584453|ref|XP_002532957.1| conserved hypothetical protein [Ricinus communis]
gi|223527267|gb|EEF29423.1| conserved hypothetical protein [Ricinus communis]
Length = 834
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 125/338 (36%), Positives = 188/338 (55%), Gaps = 31/338 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNSVLQCLTYT PLA + +H + C + G C C ++
Sbjct: 8 GLENLGNTCFLNSVLQCLTYTEPLAAYLQSGKHQTSC-HIAG----------FCALCAIQ 56
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
K + R+L P + S LR + +F+ RQEDAHE++ ++++ H CL
Sbjct: 57 KHVSRALQSTGRSLVPKDLVSNLRCISRNFRNARQEDAHEYMVNLLESMHKCCL------ 110
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G S E S+V +IFGG L+SQV+C C SNK D +D+SL+I+ +
Sbjct: 111 -PSGVPSESPAAYE-----KSLVHKIFGGRLRSQVECQQCSYCSNKFDPFLDLSLEIVKA 164
Query: 208 CSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+L A++ F E+LDG K Y+C CK+ V A+K++++ +PN+L I LKRF G
Sbjct: 165 DTLPVALRNFTAAELLDGGEKHYQCQKCKQKVRAKKRLTVHNAPNVLTIHLKRFHAHDPG 224
Query: 267 -KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
K+DK + F+ L + F+ S + +Y L+G +VH G S SGHY +I+ + G W+
Sbjct: 225 RKVDKKVLFDHSLDMKPFV-SGSYEGDLKYSLYGVLVHFGHSTHSGHYVCFIRTSSGIWH 283
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIR-----ANQRPV 358
ND+ V + + VL +K Y+LF++R A +RP
Sbjct: 284 LLNDNEVRPVSEKVVLDQKAYMLFYVRDRKANATKRPA 321
>gi|194376936|dbj|BAG63029.1| unnamed protein product [Homo sapiens]
Length = 1044
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 163/272 (59%), Gaps = 14/272 (5%)
Query: 83 FCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR 142
C ++ I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL
Sbjct: 2 MCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL- 60
Query: 143 LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISL 202
G + +++V +IFGG L+S+VKCL C S+ D +DI+L
Sbjct: 61 ------------NGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITL 108
Query: 203 DILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEG 262
+I + S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF
Sbjct: 109 EIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFAN 168
Query: 263 IFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIG 322
GGKI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G
Sbjct: 169 FTGGKIAKDVKYPEYLDIRPYMSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNG 227
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRAN 354
WY NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 228 LWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSH 259
>gi|255086819|ref|XP_002509376.1| predicted protein [Micromonas sp. RCC299]
gi|226524654|gb|ACO70634.1| predicted protein [Micromonas sp. RCC299]
Length = 383
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/354 (36%), Positives = 200/354 (56%), Gaps = 30/354 (8%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
++M W P++ RK G GL NLGN+C++N+V+QCLT+TP LA FCL +H
Sbjct: 50 HIRMEW-PTV----RKVGS---GLANLGNTCFMNAVMQCLTHTPALAAFCLDGEHRRFRP 101
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
+ E + + + R+L+ + + +P+ LR ++ F+ GRQEDA
Sbjct: 102 KGGNGGGGSFSAIYE-----MGEHVCRALAGERRVVSPSAFVKNLRSISKTFRKGRQEDA 156
Query: 126 HEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
HEF R ++DA H C+ + R K +S ++ V ++FGG L+SQV C
Sbjct: 157 HEFARCLLDAMHEKCV--EHARPKPPKNS--------PRAETTFVFQVFGGRLRSQVTCK 206
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCD---NCKKLVSARK 242
CG +S+ D MD+SLDI + S++ A++++ EVLDG+NKYKC+ + A K
Sbjct: 207 TCGRKSDTFDSFMDLSLDIAKAKSVEAALKRYVAVEVLDGSNKYKCEMGGGKPHMTRATK 266
Query: 243 QMSILQSPNILVIQLKRFEGI-FG-GKIDKAIAFEEVLVLSSFMCKASQDPQ--PEYKLF 298
Q +I +P +L +QLKRFE + FG GK+ + + + L ++ M A+ + +Y LF
Sbjct: 267 QFTIDAAPLVLTVQLKRFEYVPFGRGKLTQFVEYPTSLDITGAMSDANPKARGVEKYSLF 326
Query: 299 GTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+VH+G S SGHYY Y+K A G WY +D VS ++ + L++K Y+LF+ R
Sbjct: 327 AVLVHAGGSMHSGHYYCYVKAATGVWYEMDDEGVSATSERTALNQKAYLLFYAR 380
>gi|115299771|ref|NP_958811.2| deubiquitinating enzyme 1a [Mus musculus]
Length = 468
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/331 (34%), Positives = 178/331 (53%), Gaps = 29/331 (8%)
Query: 24 GPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPF 83
GP GL+N GNSCYLN+ LQCLT+TPPLA++ L +HS C G C
Sbjct: 48 GPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEG-----------CKM 96
Query: 84 CILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
C +E + +SL + D Q+ F + +QEDAHEFL + ++ H +CL++
Sbjct: 97 CAMEAHVTQSLLHTHSGDVMKPSQNLTSAFHKR----KQEDAHEFLMFTLETMHESCLQV 152
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
+ E + SS + +IFGG +SQ+KC C S D +DI LD
Sbjct: 153 HR-------------QSEPTSEDSSPIHDIFGGWWRSQIKCHHCQGTSYSYDPFLDIPLD 199
Query: 204 ILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI 263
I + S+K+A+Q + E L G N Y C C++ A K + + +P +L++ LKRF G
Sbjct: 200 ISSVQSVKQALQDTEKAEELCGENSYYCGRCRQKKPASKTLKLYSAPKVLMLVLKRFSGS 259
Query: 264 FGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR 323
G K+D+ +++ E L L ++ + + P P Y L+ +VH G + SGHY+ +K G+
Sbjct: 260 MGKKLDRKVSYPEFLDLKPYLSQPTGGPLP-YALYAVLVHEGATCHSGHYFCCVKAGHGK 318
Query: 324 WYCCNDSYVSVSTLQEVLSEKVYILFFIRAN 354
WY +D+ V+ + VL+E Y+LF+++ N
Sbjct: 319 WYKMDDTKVTSCDVTSVLNENAYVLFYVQQN 349
>gi|357143373|ref|XP_003572898.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like
[Brachypodium distachyon]
Length = 1051
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 191/347 (55%), Gaps = 29/347 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CYLNSVLQCLTYT P + +H S C+ C C L+
Sbjct: 83 GLQNLGNTCYLNSVLQCLTYTEPFVAYLQSGKHKSSCRTAGF-----------CALCALQ 131
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ +L + P + LR + F+ RQEDAHE + ++++ H CL
Sbjct: 132 NHVRCALQSTGKILTPMQFVKNLRCISRSFRNYRQEDAHELMVNLLESMHKCCL------ 185
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G S E S+V IFGG L+SQVKC++C S+K D +D+SL+I N+
Sbjct: 186 -PSGMPSQSPSAYE-----KSLVHRIFGGRLRSQVKCVSCSHCSSKFDPFLDLSLEIANA 239
Query: 208 CSLKEAMQKFFQPEVL-DGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFG- 265
+L +A+Q F + E+L DG +Y C +C++ V+A+K+ +I ++P++L I LKRF
Sbjct: 240 ATLVKALQNFTEEELLDDGEKQYNCQHCRQKVAAKKRFTIDKAPDVLTIHLKRFSPFNPR 299
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KIDK + F+ L L F+ S+D Y L+G +VH+G++ +GHYY +++ + G W+
Sbjct: 300 HKIDKKVDFQPTLDLKPFVSN-SEDMDFRYNLYGVLVHAGWNTQAGHYYCFVRTSSGMWH 358
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKSH 372
+D+ V +VL +K Y+LF++R V ++ F NG ++
Sbjct: 359 NLDDNQVHQVREADVLRQKAYMLFYVRDR---VRSSVIFKDNGAANY 402
>gi|32402146|gb|AAP81046.1| deubiquitinating enzyme 1A [Mus musculus]
Length = 465
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/331 (34%), Positives = 178/331 (53%), Gaps = 30/331 (9%)
Query: 24 GPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPF 83
GP GL+N GNSCYLN+ LQCLT+TPPLA++ L +HS C G C
Sbjct: 48 GPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEG-----------CKM 96
Query: 84 CILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
C +E + +SL + D Q+ F + R+EDAHEFL + ++ H +CL++
Sbjct: 97 CAMEAHVTQSLLHTHSGDVMKPSQNLTSAFHK-----RKEDAHEFLMFTLETMHESCLQV 151
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
+ E + SS + +IFGG +SQ+KC C S D +DI LD
Sbjct: 152 HR-------------QSEPTSEDSSPIHDIFGGWWRSQIKCHHCQGTSYSYDPFLDIPLD 198
Query: 204 ILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI 263
I + S+K+A+Q + E L G N Y C C++ A K + + +P +L++ LKRF G
Sbjct: 199 ISSVQSVKQALQDTEKAEELCGENSYYCGRCRQKKPASKTLKLYSAPKVLMLVLKRFSGS 258
Query: 264 FGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR 323
G K+D+ +++ E L L ++ + + P P Y L+ +VH G + SGHY+ +K G+
Sbjct: 259 MGKKLDRKVSYPEFLDLKPYLSQPTGGPLP-YALYAVLVHEGATCHSGHYFCCVKAGHGK 317
Query: 324 WYCCNDSYVSVSTLQEVLSEKVYILFFIRAN 354
WY +D+ V+ + VL+E Y+LF+++ N
Sbjct: 318 WYKMDDTKVTSCDVTSVLNENAYVLFYVQQN 348
>gi|11993475|gb|AAG42756.1|AF302665_1 ubiquitin-specific protease 15 [Arabidopsis thaliana]
Length = 924
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 131/335 (39%), Positives = 185/335 (55%), Gaps = 26/335 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N+VLQ LT T PL + L+ HS C K C C
Sbjct: 437 PRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSG-----------KDWCLMCE 485
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
LE+ ++ L A ++I S +R G QEDAHEFLR ++ + + CL
Sbjct: 486 LEQHVMMLRESGGPLSA-SRILSHMRSINCQIGDGSQEDAHEFLRLLVASMPSICLE--- 541
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
R GG + ET ++V+ +FGG L S+VKCL C ES + + IMD++L+I
Sbjct: 542 --RLGGETKVDPRLQET-----TLVQHMFGGRLHSKVKCLRCDHESERYENIMDLTLEIY 594
Query: 206 NSCSL-KEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
++A+ +F +PE LDG N Y+C C V ARK++SI ++PNIL I LKRF+
Sbjct: 595 GWVEFFQDALIQFTRPEDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQEGR 654
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH--SGFSPDSGHYYAYIKDAIG 322
GKI+K I+F E+L + FM + P P Y L+ IVH + + SGHY +Y+KD G
Sbjct: 655 YGKINKCISFPEMLDMIPFMTRTGDVP-PLYMLYAVIVHLDTLNASFSGHYISYVKDLRG 713
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
WY +DS + + +V+SE Y+LF++R+ RP
Sbjct: 714 NWYRIDDSEIHPVPMTQVMSEGAYMLFYMRSYPRP 748
>gi|326524007|dbj|BAJ97014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1026
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 180/340 (52%), Gaps = 33/340 (9%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSC+ N VLQCL+YT PL + L+ H+ C + C C
Sbjct: 133 PCGLVNCGNSCFANVVLQCLSYTRPLVAYLLEKDHTRQCT---------IRHEDWCFLCE 183
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
L+ I +++ + AP I S LR + GRQEDAHEF+R+ ID + CL
Sbjct: 184 LQSHIQKAID-SVHAFAPMNILSRLRNIGGNLGFGRQEDAHEFMRFAIDKMQSACLDEY- 241
Query: 146 LRRKGGGSSGGGGGGETINGGSS----VVKEIFGGALQSQVKCLACGAESNKVDEIMDIS 201
GGE + S+ V++ IFGG LQSQV+C ACG SN+ + +MD++
Sbjct: 242 -------------GGEKVVDHSTQETTVIQHIFGGRLQSQVQCTACGMVSNRYENMMDLT 288
Query: 202 LDILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF 260
++I SL++ + +F E LDG+NKYKCD C V ARK +++ Q+PNIL I LKRF
Sbjct: 289 VEIHGDAESLEKCLDQFTAVEWLDGDNKYKCDGCNDYVKARKHLTVHQAPNILTITLKRF 348
Query: 261 EGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYIK 318
+ GK++K + F L L+ +M ++ D +Y L+ +VH S GHY YIK
Sbjct: 349 QSGRFGKLNKKVTFPTTLDLTPYM--STTDGTDQYDLYAVVVHLDMLNASFFGHYICYIK 406
Query: 319 DAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPV 358
G W +D V +EV ++ Y+L + R RPV
Sbjct: 407 HHRGCWLKIDDCKVMAVDEEEVHAQGAYMLLYSRRTPRPV 446
>gi|50252264|dbj|BAD28270.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
Length = 919
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 131/342 (38%), Positives = 188/342 (54%), Gaps = 32/342 (9%)
Query: 22 RGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKREC 81
RG P GL N GNSCY N+VLQCL T PL + L HS C K C
Sbjct: 380 RGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCS-----------KNWC 428
Query: 82 PFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL 141
C LE+ +L +P++I S LR G QEDAHEFLR+++ + CL
Sbjct: 429 LMCELEQ-YASTLRESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQGACL 487
Query: 142 RLKKLRRKGGGSSGGGGGGETINGG---SSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
G GG + + +++++++FGG L+S+VKCL C ES + + IM
Sbjct: 488 -------------DGLGGEKQVEASLQETTLIQQMFGGRLKSKVKCLRCYHESERYENIM 534
Query: 199 DISLDILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQL 257
D++L+I SL++A+ +F PE LDG N YKC C V ARKQ+S+ + PNIL + L
Sbjct: 535 DLTLEIHGWVESLQDALTQFTAPEDLDGENMYKCGRCSAYVKARKQLSVHEVPNILTVVL 594
Query: 258 KRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH--SGFSPDSGHYYA 315
KRF+ GKI+K + F ++L + F+ A +P P Y L+ +VH + + SGHY +
Sbjct: 595 KRFQTGKYGKINKCVTFPDMLDMVPFVTGAGDNP-PLYFLYAVVVHVDTENASFSGHYIS 653
Query: 316 YIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
Y+KD G W +DS V +L +V+SE Y+LF++R+ RP
Sbjct: 654 YVKDMQGTWLRIDDSEVQAVSLNQVMSEGAYMLFYMRSFPRP 695
>gi|302696891|ref|XP_003038124.1| hypothetical protein SCHCODRAFT_37924 [Schizophyllum commune H4-8]
gi|300111821|gb|EFJ03222.1| hypothetical protein SCHCODRAFT_37924, partial [Schizophyllum
commune H4-8]
Length = 314
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 191/344 (55%), Gaps = 33/344 (9%)
Query: 12 QPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDS 71
+P +S G GL N GN+C++NS LQCL +TPPL L+L L+ S
Sbjct: 1 EPIDISWPDNVNGVGAGLFNTGNTCFMNSALQCLFHTPPL----LRL--------LSAHS 48
Query: 72 ALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRY 131
+ C C ++ +RS S + + P I L+ FA+ + GRQED+HEFLR+
Sbjct: 49 KDTCKSSGFCMTCCMKYTAMRSQSSNKSAFNPDGITRNLKAFAKSLRYGRQEDSHEFLRH 108
Query: 132 VIDACHNTCLRLKKLRRKGGGSSGGGGGGETIN---GGSSVVKEIFGGALQSQVKCLACG 188
I+ +CL G + ++ +S V ++FGG L+S+V C CG
Sbjct: 109 AIEGLQRSCL---------------AGQPQKVDPKLAETSWVHQLFGGQLRSRVHCKGCG 153
Query: 189 AESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQ 248
S+ D I+D+SLDI + SLK+A++ F P+ L G++KYKCD+CKK V+A K+ +I +
Sbjct: 154 HNSDTYDSILDLSLDIHRTSSLKDALKSFVAPDYLKGSDKYKCDHCKKYVNAEKRFTINK 213
Query: 249 SPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSP 308
+P +L I LKRF FG K+ + ++E + L +M + S P+ Y L+G I HSG P
Sbjct: 214 APLVLTIHLKRFSP-FGSKLTNLLHYDEHITLKPYMSEGSFGPR--YSLYGVICHSGSGP 270
Query: 309 DSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+SGHY++++K GRWY ND V+ + + + Y+L +I+
Sbjct: 271 NSGHYFSFVKSKQGRWYEMNDESVTPCSKPYPMLKTAYMLMYIQ 314
>gi|115445271|ref|NP_001046415.1| Os02g0244300 [Oryza sativa Japonica Group]
gi|113535946|dbj|BAF08329.1| Os02g0244300 [Oryza sativa Japonica Group]
Length = 975
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 131/342 (38%), Positives = 188/342 (54%), Gaps = 32/342 (9%)
Query: 22 RGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKREC 81
RG P GL N GNSCY N+VLQCL T PL + L HS C K C
Sbjct: 436 RGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCS-----------KNWC 484
Query: 82 PFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL 141
C LE+ +L +P++I S LR G QEDAHEFLR+++ + CL
Sbjct: 485 LMCELEQ-YASTLRESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQGACL 543
Query: 142 RLKKLRRKGGGSSGGGGGGETINGG---SSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
G GG + + +++++++FGG L+S+VKCL C ES + + IM
Sbjct: 544 -------------DGLGGEKQVEASLQETTLIQQMFGGRLKSKVKCLRCYHESERYENIM 590
Query: 199 DISLDILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQL 257
D++L+I SL++A+ +F PE LDG N YKC C V ARKQ+S+ + PNIL + L
Sbjct: 591 DLTLEIHGWVESLQDALTQFTAPEDLDGENMYKCGRCSAYVKARKQLSVHEVPNILTVVL 650
Query: 258 KRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH--SGFSPDSGHYYA 315
KRF+ GKI+K + F ++L + F+ A +P P Y L+ +VH + + SGHY +
Sbjct: 651 KRFQTGKYGKINKCVTFPDMLDMVPFVTGAGDNP-PLYFLYAVVVHVDTENASFSGHYIS 709
Query: 316 YIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
Y+KD G W +DS V +L +V+SE Y+LF++R+ RP
Sbjct: 710 YVKDMQGTWLRIDDSEVQAVSLNQVMSEGAYMLFYMRSFPRP 751
>gi|218190388|gb|EEC72815.1| hypothetical protein OsI_06524 [Oryza sativa Indica Group]
Length = 808
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 131/342 (38%), Positives = 188/342 (54%), Gaps = 32/342 (9%)
Query: 22 RGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKREC 81
RG P GL N GNSCY N+VLQCL T PL + L HS C K C
Sbjct: 269 RGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCS-----------KNWC 317
Query: 82 PFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL 141
C LE+ +L +P++I S LR G QEDAHEFLR+++ + CL
Sbjct: 318 LMCELEQ-YASTLRESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQGACL 376
Query: 142 RLKKLRRKGGGSSGGGGGGETINGG---SSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
G GG + + +++++++FGG L+S+VKCL C ES + + IM
Sbjct: 377 -------------DGLGGEKQVEASLQETTLIQQMFGGRLKSKVKCLRCYHESERYENIM 423
Query: 199 DISLDILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQL 257
D++L+I SL++A+ +F PE LDG N YKC C V ARKQ+S+ + PNIL + L
Sbjct: 424 DLTLEIHGWVESLQDALTQFTAPEDLDGENMYKCGRCSAYVKARKQLSVHEVPNILTVVL 483
Query: 258 KRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH--SGFSPDSGHYYA 315
KRF+ GKI+K + F ++L + F+ A +P P Y L+ +VH + + SGHY +
Sbjct: 484 KRFQTGKYGKINKCVTFPDMLDMVPFVTGAGDNP-PLYFLYAVVVHVDTENASFSGHYIS 542
Query: 316 YIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
Y+KD G W +DS V +L +V+SE Y+LF++R+ RP
Sbjct: 543 YVKDMQGTWLRIDDSEVQAVSLNQVMSEGAYMLFYMRSFPRP 584
>gi|15238468|ref|NP_201348.1| ubiquitin carboxyl-terminal hydrolase 17 [Arabidopsis thaliana]
gi|75262625|sp|Q9FKP5.1|UBP17_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17; AltName:
Full=Deubiquitinating enzyme 17; Short=AtUBP17; AltName:
Full=Ubiquitin thioesterase 17; AltName:
Full=Ubiquitin-specific-processing protease 17
gi|9759625|dbj|BAB11567.1| unnamed protein product [Arabidopsis thaliana]
gi|332010675|gb|AED98058.1| ubiquitin carboxyl-terminal hydrolase 17 [Arabidopsis thaliana]
Length = 731
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 187/340 (55%), Gaps = 28/340 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL NLGNSCY N+VLQCL +T PL ++ ++ HS C+ +K C C
Sbjct: 328 PFGLVNLGNSCYANAVLQCLAFTRPLISYLIRGLHSKTCR-----------KKSWCFVCE 376
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
E I+++ + L +P KI S L+ +H G++EDAHEFLR +D + L+
Sbjct: 377 FEHLILKARGGESPL-SPIKILSKLQKIGKHLGPGKEEDAHEFLRCAVDTMQSVFLK--- 432
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
+ G ET ++V FGG L S++KC+AC +S + + +MD++++I
Sbjct: 433 -----EAPAAGPFAEET-----TLVGLTFGGYLHSKIKCMACLHKSERPELMMDLTVEID 482
Query: 206 NSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
SL+EA+ +F EVLDG N+Y C CK A+K++ IL+ PNIL + LKRF+
Sbjct: 483 GDIGSLEEALAQFTAYEVLDGENRYFCGRCKSYQKAKKKLMILEGPNILTVVLKRFQSDN 542
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH--SGFSPDSGHYYAYIKDAIG 322
GK+ K I F E+L +S +M + P Y L+ +VH + + SGHY YIK G
Sbjct: 543 FGKLSKPIHFPELLDISPYMSDPNHGDHPVYSLYAVVVHLDAMSTLFSGHYVCYIKTLDG 602
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANG 362
W+ +DS V L+ VL E Y+L + R + RPVS NG
Sbjct: 603 DWFKIDDSNVFPVQLETVLLEGAYMLLYARDSPRPVSKNG 642
>gi|242064616|ref|XP_002453597.1| hypothetical protein SORBIDRAFT_04g008750 [Sorghum bicolor]
gi|241933428|gb|EES06573.1| hypothetical protein SORBIDRAFT_04g008750 [Sorghum bicolor]
Length = 966
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/342 (38%), Positives = 190/342 (55%), Gaps = 32/342 (9%)
Query: 22 RGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKREC 81
RG P GL N GNSCY N+VLQCL T PL + L HS C K C
Sbjct: 432 RGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCSS-----------KNWC 480
Query: 82 PFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL 141
C LE+ +L +P++I S LR G QEDAHEFLR+++ + CL
Sbjct: 481 LMCELEQ-YASTLRESGGPLSPSRILSNLRNIGCRLGGGTQEDAHEFLRHLVMSMQAACL 539
Query: 142 RLKKLRRKGGGSSGGGGGGETINGG---SSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
G GG + + +++++++FGG L+S+VKCL C ES + + IM
Sbjct: 540 -------------DGLGGEKHVEPSLQETTLIQQMFGGRLKSKVKCLRCYHESERYENIM 586
Query: 199 DISLDILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQL 257
D++L+I SL++A+ +F PE LDG+N YKC C V ARKQ+S+ + PNIL + L
Sbjct: 587 DLTLEIHGWVESLQDALTQFTAPEDLDGDNMYKCGRCSAYVKARKQLSVHEVPNILTLVL 646
Query: 258 KRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH--SGFSPDSGHYYA 315
KRF+ GKI+K + F ++L + F+ + +P P Y L+ +VH + + SGHY +
Sbjct: 647 KRFQSGKYGKINKCVTFPDMLDMVPFVTGSGDNP-PLYFLYAVVVHVDTENASFSGHYIS 705
Query: 316 YIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
Y+KD G W +DS V V ++ +V+SE Y+LF++R+ RP
Sbjct: 706 YVKDMQGTWLRIDDSEVQVVSVNQVMSEGAYMLFYLRSFPRP 747
>gi|379030631|ref|NP_001243800.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 3 [Homo
sapiens]
gi|187653918|sp|A6NCW0.1|U17L3_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
3; AltName: Full=Deubiquitinating enzyme 17-like protein
3; AltName: Full=Ubiquitin thioesterase 17-like protein
3; AltName: Full=Ubiquitin-specific-processing protease
17-like protein 3
Length = 530
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 181/328 (55%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY N+ LQCLTYT PLAN+ L +HS C +R + C C ++
Sbjct: 81 GLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTC-----------QRPKCCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I L +P + + A F G+QED HEFL + +DA CL
Sbjct: 130 AHIT------WALHSPGHVIQPSQALASGFHRGKQEDVHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+K+A+++ +PE L+G N Y C C + A +++ S +L++ LKRF + G K
Sbjct: 231 QSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + +M + + P Y L+ +VH+G+S GHY++Y+K G+WY
Sbjct: 291 LAKNVQYPECLDMQPYMSQQNTGPLV-YVLYAVLVHAGWSCHDGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+V ++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTVCSITSVLSQQAYVLFYIQKSE 377
>gi|357489973|ref|XP_003615274.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355516609|gb|AES98232.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 1050
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/357 (36%), Positives = 193/357 (54%), Gaps = 31/357 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N+VLQCL +TPPL + L+ HS C K+ C C
Sbjct: 541 PFGLTNCGNSCYANAVLQCLVFTPPLTAYLLQGLHSKSCAS-----------KKWCFTCE 589
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
E I++S L +P I S L+ GR+EDAHEFLR+V++ + CL
Sbjct: 590 FESLILKSKDTKFPL-SPIGILSQLQSIGSQLGNGREEDAHEFLRHVVETMQSVCLM--- 645
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
G + + +++V FGG L+S+++C+ CG +S + + +MD++++I
Sbjct: 646 --------ECGVDASDALKEQTNLVGLTFGGYLRSKIQCMKCGGKSERQERMMDLTVEIE 697
Query: 206 NS-CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
SL+EA+++F E LDG NKY C CK A+KQM++ ++PN+L I LKRF
Sbjct: 698 GEITSLEEALKQFTSTETLDGENKYHCGRCKSYEKAKKQMAVSEAPNVLTIALKRFRSGK 757
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH--SGFSPDSGHYYAYIKDAIG 322
GK++K+I F E+L L+ FM S Y+L+G +VH + + SGHY Y+K+
Sbjct: 758 FGKLNKSIRFPEILDLAPFMSGTSD--LAIYRLYGVVVHLDTMNAAFSGHYVGYVKNFQN 815
Query: 323 RWYCCNDSYVSVS--TLQEVLSEKVYILFFIRANQR-PVSANGTFASNGVKSHENGK 376
W+ +DS V V+ L+ VL++ Y+L + R + R P S+ KS NGK
Sbjct: 816 SWFKVDDSVVRVTPVELETVLTKGAYMLLYARCSPRAPRLIRDMIVSSDSKSKVNGK 872
>gi|109459181|ref|XP_219062.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase DUB-1-like [Rattus
norvegicus]
Length = 504
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 187/347 (53%), Gaps = 31/347 (8%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
EL +PSL ++ +R G GL+N+GNSCYLN+VLQCLT+TPPLA++ L +HS C
Sbjct: 32 ELSAKGKPSLSLQRLQRPGS--GLQNIGNSCYLNAVLQCLTHTPPLADYMLSQEHSQRCC 89
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
G C C +E + +SL + I F RQEDA
Sbjct: 90 YPEG-----------CNMCAMEAHVTQSL----LHSHSGGVMKPSEILTSTFHKHRQEDA 134
Query: 126 HEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
HEFL + ++ H +CLR G ET + SS++ +IFGG ++SQ+KC
Sbjct: 135 HEFLMFTLNTMHESCLR-------------GCKQSETTSKDSSLIYDIFGGQMRSQIKCH 181
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
C + D +++ LDI ++ S+K+A++ + E L G+N Y C C++ + A K
Sbjct: 182 HCQGTLDSYDPFLNLFLDICSAQSVKQALEDLVKVEELQGDNAYYCGRCREKMPASKTTK 241
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
+ + +L++ L R G K+++ +++ E L L ++ + + P P Y L+ +VH G
Sbjct: 242 VQTASKVLLLVLNRSYDFGGDKLNRVVSYPEYLDLQPYLSQPTAGPLP-YALYAVLVHDG 300
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+ SGHY+ Y+K + G+WY +DS V+ + VLSE Y+LF+++
Sbjct: 301 VTCSSGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFYVQ 347
>gi|109462598|ref|XP_001074163.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase DUB-1-like [Rattus
norvegicus]
Length = 504
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 187/347 (53%), Gaps = 31/347 (8%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
EL +PSL ++ +R G GL+N+GNSCYLN+VLQCLT+TPPLA++ L +HS C
Sbjct: 32 ELSAKGKPSLSLQRLQRPGS--GLQNIGNSCYLNAVLQCLTHTPPLADYMLSQEHSQRCC 89
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
G C C +E + +SL + I F RQEDA
Sbjct: 90 YPEG-----------CNMCAMEAHVTQSL----LHSHSGGVMKPSEILTSTFHKHRQEDA 134
Query: 126 HEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
HEFL + ++ H +CLR G ET + SS++ +IFGG ++SQ+KC
Sbjct: 135 HEFLMFTLNTMHESCLR-------------GCKQSETTSKDSSLIYDIFGGQMRSQIKCH 181
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
C + D +++ LDI ++ S+K+A++ + E L G+N Y C C++ + A K
Sbjct: 182 HCQGTLDSYDPFLNLFLDICSAQSVKQALEDLVKVEELQGDNAYYCGRCREKMPASKTTK 241
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
+ + +L++ L R G K+++ +++ E L L ++ + + P P Y L+ +VH G
Sbjct: 242 VQTASKVLLLVLNRSYDFGGDKLNRVVSYPEYLDLQPYLSQPTAGPLP-YALYAVLVHDG 300
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+ SGHY+ Y+K + G+WY +DS V+ + VLSE Y+LF+++
Sbjct: 301 VTCSSGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFYVQ 347
>gi|301102127|ref|XP_002900151.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
gi|262102303|gb|EEY60355.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
Length = 739
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 210/379 (55%), Gaps = 45/379 (11%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQ----HS 61
E ++W+ S K+ GP G NLGN+CYLNSVLQCLTYTP A F L + +
Sbjct: 109 ERVLAWKHS------KKIGP--GFANLGNTCYLNSVLQCLTYTPCFAQFLLDKEVFASFN 160
Query: 62 SLCKQLTGDS----------ALDAERKRECPFCILE--KRIVRSLSVD--LTLDAPAKIQ 107
S TG+ + ++ FC + R+++S+ + + + P ++
Sbjct: 161 SGALPSTGNKFNKKFGKNGFSGNSGNAGGNGFCSVRAMSRLLQSVHGNNAVRVLQPKELV 220
Query: 108 SCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGS 167
+R ++ F+ GRQED+HEF R ++D+ +CLR ++ + ++ +
Sbjct: 221 MNVRHISKSFRIGRQEDSHEFFRLLLDSMQRSCLRKAHIKSESHSAAS-----------T 269
Query: 168 SVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSC-SLKEAMQKFFQPEVLDGN 226
+ V +FGG L++ +KC CG S + D+ +D+SL+I N S+K A++ F E LD
Sbjct: 270 TFVYRMFGGKLKNHLKCAKCGFVSERFDDFLDLSLEISNGVHSVKGALRHFTAIEKLDER 329
Query: 227 NKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCK 286
N +KC +C K A K +SI + PN+L+IQLKRF+ +FG KI + I F L ++S M K
Sbjct: 330 NAWKCSSCGKPSRAEKGLSIAECPNVLMIQLKRFDLMFG-KIKRHIEFPRSLDIASGMSK 388
Query: 287 ASQDPQ---PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE 343
+D + +Y+L +VH+GFS D GHYYA++K + G+WY ND V +L VL +
Sbjct: 389 NCEDRRRGRTKYELHAVLVHAGFSTDCGHYYAFVKGSSGQWYEMNDDSVRWVSLDTVLQQ 448
Query: 344 KVYILFFIRA---NQRPVS 359
K Y+LF+ R ++RP S
Sbjct: 449 KAYMLFYSRVLPPSERPKS 467
>gi|356518197|ref|XP_003527768.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 734
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/346 (38%), Positives = 186/346 (53%), Gaps = 38/346 (10%)
Query: 21 KRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
K G PP GL+N GNSC+ N VLQCL++T PL F L+ H C
Sbjct: 164 KPGFPPCGLKNCGNSCFANVVLQCLSFTRPLIAFLLEKGHHGECCH-----------SDW 212
Query: 81 CPFCILEKRIVRSLSVDLTLDA--PAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHN 138
C C E + + V L+ A P I S L + GRQEDAHEF+R+ IDA +
Sbjct: 213 CFLCEFETHVEK---VRLSSQAFSPMNILSRLPNISGTLGYGRQEDAHEFIRFAIDAMQS 269
Query: 139 TCLRLKKLRRKGGGSSGGGGGGETI----NGGSSVVKEIFGGALQSQVKCLACGAESNKV 194
CL GGE + + +++++ IFGG LQS+V C C SN+
Sbjct: 270 VCL--------------DEFGGEKVVPPKHQETTLIQHIFGGHLQSEVICTECEKNSNQY 315
Query: 195 DEIMDISLDIL-NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
+ +MD++++I ++ SL+E + +F E L G+N YKCD CK V A K++++ ++PNIL
Sbjct: 316 ENMMDLNVEIHGDAASLEECLDQFTAKEWLHGDNMYKCDGCKGYVKAWKRLTVKRAPNIL 375
Query: 254 VIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--G 311
I LKRF+ GK++K + F E L LS +M +A D YKL+ +VH S G
Sbjct: 376 TIALKRFQSGRFGKLNKRVTFPETLDLSPYMSEAG-DGSDIYKLYAVVVHIDMLNASFFG 434
Query: 312 HYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
HY +IKD G WY +D VS L+EVLS+ Y+L + R N RP
Sbjct: 435 HYICFIKDLCGNWYRIDDWKVSSVELEEVLSQGAYMLLYSRVNARP 480
>gi|168044470|ref|XP_001774704.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674004|gb|EDQ60519.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 411
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/320 (38%), Positives = 177/320 (55%), Gaps = 26/320 (8%)
Query: 24 GPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPF 83
G P GL N GNSC+ N VLQCLTYT PL + L H CK R C
Sbjct: 114 GVPCGLLNCGNSCFANVVLQCLTYTRPLTAYLLNGSHEEDCK-----------RNDWCFM 162
Query: 84 CILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
C L+ V ++ + +P +I S +R H GRQEDAHEF+R+ ID+ + CL
Sbjct: 163 CELQSH-VHNVRQNRNPFSPIRILSRIRNIGNHLGYGRQEDAHEFMRFAIDSMQSICL-- 219
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
GG + ++++ IFGG LQSQVKC+ C ESN+ + +MD++++
Sbjct: 220 --------DEFGGEKDVDPATQETTLIHHIFGGHLQSQVKCMQCHHESNRYESMMDLAVE 271
Query: 204 ILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEG 262
I SL++A+ +F E+LDG+NKYKCD C V ARKQ+++ ++PN+L I LKRF+
Sbjct: 272 IHGVVDSLEDAIAQFTTIEMLDGDNKYKCDRCNAYVRARKQLTVYEAPNVLTIALKRFQS 331
Query: 263 IFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYIKDA 320
GK++K + F EVL +S +M A+ P Y+L+ +VH S GHY ++KD+
Sbjct: 332 GKFGKLNKRVTFPEVLDMSPYMSGANDHPLL-YRLYAVVVHVDMLNASFFGHYICFVKDS 390
Query: 321 IGRWYCCNDSYVSVSTLQEV 340
G WY +D V L+ V
Sbjct: 391 NGVWYKIDDRKVQRHYLRAV 410
>gi|355754426|gb|EHH58391.1| hypothetical protein EGM_08229 [Macaca fascicularis]
Length = 1130
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 184/348 (52%), Gaps = 30/348 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR----L 143
IV++ + P L+ + + G + D F Y L+ L
Sbjct: 172 NHIVQAFANSGNAIKPVSFIRDLKSKHQSIEVGGRMDEEWFCSYTGHLLQPPSLKGCGLL 231
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
+L R+ +++V +IFGG L+S+VKC C + S+ D +D++L+
Sbjct: 232 FRLDRQ--------------TQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALE 277
Query: 204 ILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI 263
I + ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF
Sbjct: 278 IRQAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANF 337
Query: 264 FGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR 323
GGKI K + + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+
Sbjct: 338 SGGKITKDVGYPEFLNIRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQ 396
Query: 324 WYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
WY NDS V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 397 WYQMNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSS 444
>gi|348673035|gb|EGZ12854.1| hypothetical protein PHYSODRAFT_511733 [Phytophthora sojae]
Length = 742
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 135/380 (35%), Positives = 209/380 (55%), Gaps = 43/380 (11%)
Query: 4 AHELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSS 62
A E ++WQ S K+ GP G NLGN+CYLNSVLQCLTYTP A + L K +S
Sbjct: 95 AVERVLTWQHS------KKIGP--GFANLGNTCYLNSVLQCLTYTPCFAQYLLDKEVFAS 146
Query: 63 LCKQLTGDSALDAERKRECPF---------CILE--KRIVRSLSVD--LTLDAPAKIQSC 109
+ S + + + F C + R+++S+ + + P ++
Sbjct: 147 FNGGMLPASGKNGNKFGKNGFNTSGGGNGFCSVRAMSRLLQSVHGNNAAKVLQPKELVMN 206
Query: 110 LRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSV 169
+R ++ F+ GRQED+HEF R ++D+ +CLR ++ ET + S+
Sbjct: 207 VRHISKSFRIGRQEDSHEFFRLLLDSMQRSCLRKANIK------------SETHSAASTT 254
Query: 170 -VKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSC-SLKEAMQKFFQPEVLDGNN 227
V IFGG L++ +KC CG S + D+ +D+SL+I + ++K A+ F E LD N
Sbjct: 255 FVHRIFGGMLKNYLKCAKCGYVSERFDDFLDLSLEIAHGVNTVKGALNHFTAIETLDDRN 314
Query: 228 KYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKA 287
+KC +C K A K ++I + PN+L+IQLKRF+ +FG KI + I F +L ++S M K
Sbjct: 315 AWKCTSCGKPSRAEKGLTIAECPNVLMIQLKRFDLMFG-KIKRHIEFPRMLDIASGMSKN 373
Query: 288 SQDPQ---PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK 344
+D + +Y+L +VH+GFS D GHYYA++K + G+WY ND V ++ VL +K
Sbjct: 374 CEDRRRGRTKYELHAVLVHAGFSTDCGHYYAFVKGSSGQWYEMNDDTVRWVSIDMVLQQK 433
Query: 345 VYILFFIRA---NQRPVSAN 361
Y+LF+ R ++RP N
Sbjct: 434 AYMLFYSRVLPLSERPKPKN 453
>gi|6681237|ref|NP_031913.1| ubiquitin carboxyl-terminal hydrolase DUB-1 [Mus musculus]
gi|2501457|sp|Q61068.1|UBPW_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase DUB-1; AltName:
Full=Deubiquitinating enzyme 1; AltName: Full=Ubiquitin
thioesterase DUB-1; AltName:
Full=Ubiquitin-specific-processing protease DUB-1
gi|1302630|gb|AAC52532.1| DUB-1 [Mus musculus]
gi|148684794|gb|EDL16741.1| mCG66629 [Mus musculus]
Length = 526
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 115/339 (33%), Positives = 184/339 (54%), Gaps = 30/339 (8%)
Query: 24 GPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPF 83
GP GL+N GNSCYLN+ LQCLT+TPPLA++ L +HS C G C
Sbjct: 48 GPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEG-----------CKL 96
Query: 84 CILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
C +E + +SL + D + I F +QEDAHEFL + ++ H +CL++
Sbjct: 97 CAMEALVTQSLLHSHSGD----VMKPSHILTSAFHKHQQEDAHEFLMFTLETMHESCLQV 152
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
+ + + SS + +IFGG +SQ+KCL C S+ D +DI LD
Sbjct: 153 HRQSK-------------PTSEDSSPIHDIFGGWWRSQIKCLLCQGTSDTYDRFLDIPLD 199
Query: 204 ILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI 263
I ++ S+K+A+ + E L G+N Y C C++ + A K + + +P +L++ L RF
Sbjct: 200 ISSAQSVKQALWDTEKSEELCGDNAYYCGKCRQKMPASKTLHVHIAPKVLMVVLNRFSAF 259
Query: 264 FGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR 323
G K+D+ +++ E L L ++ + + P P Y L+ +VH G + SGHY+ +K G+
Sbjct: 260 TGNKLDRKVSYPEFLDLKPYLSEPTGGPLP-YALYAVLVHDGATSHSGHYFCCVKAGHGK 318
Query: 324 WYCCNDSYVSVSTLQEVLSEKVYILFFI-RANQRPVSAN 361
WY +D+ V+ + VL+E Y+LF++ +AN + VS +
Sbjct: 319 WYKMDDTKVTRCDVTSVLNENAYVLFYVQQANLKQVSID 357
>gi|355568976|gb|EHH25257.1| hypothetical protein EGK_09045 [Macaca mulatta]
Length = 1126
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 184/348 (52%), Gaps = 30/348 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR----L 143
IV++ + P L+ + + G + D F Y L+ L
Sbjct: 172 NHIVQAFANSGNAIKPVSFIRDLKSKHQSIEVGGRMDEEWFCSYTGHLLQPPSLKGCGLL 231
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
+L R+ +++V +IFGG L+S+VKC C + S+ D +D++L+
Sbjct: 232 FRLDRQ--------------TQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALE 277
Query: 204 ILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI 263
I + ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF
Sbjct: 278 IRQAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANF 337
Query: 264 FGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR 323
GGKI K + + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+
Sbjct: 338 SGGKITKDVGYPEFLNIRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQ 396
Query: 324 WYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
WY NDS V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 397 WYQMNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSS 444
>gi|11993486|gb|AAG42761.1|AF302671_1 ubiquitin-specific protease 23 [Arabidopsis thaliana]
Length = 859
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 199/387 (51%), Gaps = 49/387 (12%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+LNSVLQCLTYT PLA H C + G C C ++
Sbjct: 108 GLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKYC-HVAGF----------CALCAIQ 156
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
K + + + + AP + S LR + +F+ RQEDAHE++ +++ H L
Sbjct: 157 KHVRTARQANGRILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMHKCSL------ 210
Query: 148 RKGGGSSGGGGGGETING-GSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
G E+ + S+V +IFGG+L+SQVKC C SNK D +D+SLDI
Sbjct: 211 -------PSGVPSESSDAYRRSLVHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDISK 263
Query: 207 SCSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFG 265
+ SL+ A+ +F E+LD K Y+C+ CK+ V A+KQ+++ ++P +L + LKRFE
Sbjct: 264 ADSLQRALSRFTAVELLDNGAKVYQCERCKQKVKAKKQLTVSKAPYVLTVHLKRFEAHRS 323
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KID+ + F + + F+ + +Y L+G +VH G S SGHY +++ + G WY
Sbjct: 324 EKIDRKVDFTSAIDMKPFV-SGPHEGNLKYTLYGVLVHYGRSSHSGHYACFVRTSSGMWY 382
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANG-------TFASN--------GVK 370
+D+ V + + V ++K Y+LF++R Q V N +FA+N +K
Sbjct: 383 SLDDNRVVQVSEKTVFNQKAYMLFYVRDRQNAVPKNSVPVVKKESFATNRASLIVASNIK 442
Query: 371 SHENGKEAYKG-------VKGTVPLKA 390
NG K G PLK+
Sbjct: 443 DQVNGSTVIKECGFGALVANGLAPLKS 469
>gi|431904918|gb|ELK10055.1| Ubiquitin carboxyl-terminal hydrolase 17-like protein 2 [Pteropus
alecto]
Length = 492
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 189/378 (50%), Gaps = 33/378 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRNLGN+CY N+ LQCLTYT PLA L +H+ C +R C C +
Sbjct: 45 GLRNLGNTCYANAALQCLTYTAPLARCLLSRRHAEAC-----------QRPASCVLCAMR 93
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R+ + PA + F H +QEDAHEFL + +DA CLR + R
Sbjct: 94 AHVARARRCRGEVIQPAT--GLIAGFHRH----KQEDAHEFLMFTVDAMQQACLREPERR 147
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+ G S + ++ IFGG +SQVKCL C S+ +D +DI+LDI +
Sbjct: 148 GRRCGDS-------------TPIRRIFGGYWRSQVKCLRCHGVSDTLDPYLDITLDIQAA 194
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A++ +PE LDG+N Y C C + V A K +++ +L++ LKRF G K
Sbjct: 195 QSVTQALELLVKPEKLDGDNSYHCGVCLEKVPASKTLTLHAPSEVLILVLKRFSDFTGSK 254
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
+ K + + E L + ++ + QD P EY+L+ +VH+G + SGHY+ YIK G+W+
Sbjct: 255 LAKEVQYPEHLDMRQYL--SQQDAGPLEYELYAVLVHAGGTCRSGHYFCYIKAGNGQWFK 312
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKSHENGKEAYKGVKGTV 386
+D+ V+ + LS+ Y+LF+I+ + A + H + +
Sbjct: 313 MDDAKVTACDVSSALSQDAYVLFYIQKRELQRDGGSVSAGEEQRCHWAERTGTRATPQEP 372
Query: 387 PLKAVATKPSAEQSSRKT 404
+ T P AE+ R T
Sbjct: 373 ETDSEVTGPEAEEPERGT 390
>gi|297796717|ref|XP_002866243.1| ubiquitin-specific protease 23 [Arabidopsis lyrata subsp. lyrata]
gi|297312078|gb|EFH42502.1| ubiquitin-specific protease 23 [Arabidopsis lyrata subsp. lyrata]
Length = 863
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 125/354 (35%), Positives = 190/354 (53%), Gaps = 31/354 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+LNSVLQCLTYT PLA H C + G C C ++
Sbjct: 108 GLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKYC-HVAG----------FCALCAIQ 156
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
K + + + AP + S LR + +F+ RQEDAHE++ +++ H L
Sbjct: 157 KHVRTARQATGRILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMHKCSL------ 210
Query: 148 RKGGGSSGGGGGGETING-GSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
G E+ + S+V IFGG+L+SQVKC C SNK D +D+SLDI
Sbjct: 211 -------PSGVPSESSDAYRRSLVHNIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDISK 263
Query: 207 SCSLKEAMQKFFQPEVL-DGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFG 265
+ SL+ A+ +F E+L DG+ Y+C+ CK+ V ARKQ+++ ++P +L I LKRFE
Sbjct: 264 ADSLQRALSRFTAVELLDDGSKVYQCERCKQKVKARKQLTVSKAPYVLTIHLKRFEAHRS 323
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KID+ + F + + F+ + +Y L+G +VH G S SGHY +++ + G WY
Sbjct: 324 EKIDRKVDFASAIDMKPFVS-GPHEGNLKYTLYGVLVHYGRSSHSGHYACFVRTSSGMWY 382
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKSHENGKEAY 379
+D+ V + + V ++K Y+LF++R + V N S V E KE++
Sbjct: 383 SLDDNRVLQVSEKTVFNQKAYMLFYVRDRRNAVPKN----SVPVVKKETSKESF 432
>gi|297794145|ref|XP_002864957.1| hypothetical protein ARALYDRAFT_332761 [Arabidopsis lyrata subsp.
lyrata]
gi|297310792|gb|EFH41216.1| hypothetical protein ARALYDRAFT_332761 [Arabidopsis lyrata subsp.
lyrata]
Length = 731
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 186/340 (54%), Gaps = 28/340 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL NLGNSCY NSVLQCL +T PL ++ ++ HS C+ +K C C
Sbjct: 328 PFGLVNLGNSCYANSVLQCLAFTRPLMSYLIRGLHSKTCR-----------KKSWCFVCE 376
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
E I+++ + L +P KI S L+ +H G++EDAHEFLR ++ + L+
Sbjct: 377 FEHLILKARGGESPL-SPIKILSKLQKIGKHLGPGKEEDAHEFLRCAVETMQSVFLK--- 432
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
S+ G ET ++V FGG L S++KC+ C +S + + +MD++++I
Sbjct: 433 -----EASAAGPFAEET-----TLVGLTFGGYLHSKIKCMKCLHKSEQSELMMDLTVEID 482
Query: 206 NSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
SL+EA+ +F EVLDG N+Y C CK A+K++ IL+ PNIL + LKRF+
Sbjct: 483 GDIGSLEEALAQFTAYEVLDGENRYFCGRCKSYQKAKKKLMILEGPNILTVVLKRFQSDN 542
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH--SGFSPDSGHYYAYIKDAIG 322
GK+ K I F E+L + +M + P Y L+ +VH + + SGHY YIK G
Sbjct: 543 FGKLSKPIHFPELLDIGPYMSDPNHGDHPVYSLYAVVVHLDAMSTSFSGHYVCYIKTLHG 602
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANG 362
W+ +DS V L+ VL E Y+L + R + RPVS NG
Sbjct: 603 DWFKIDDSNVFRVQLETVLLEGAYMLLYARNSPRPVSKNG 642
>gi|74206968|dbj|BAE33280.1| unnamed protein product [Mus musculus]
gi|187952153|gb|AAI39143.1| Ubiquitin specific peptidase, pseudogene (USP17 homolog) [Mus
musculus]
Length = 541
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 177/327 (54%), Gaps = 29/327 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N GNSCYLN+ LQCLT+TPPLA++ L +HS C G C C +E
Sbjct: 86 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEG-----------CKMCAME 134
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ +SL + D I +I F +QEDAHEFL + ++ H +CL++ +
Sbjct: 135 AHVTQSLLHTHSGD----IMKPSQILTSAFHKYQQEDAHEFLMFTLETMHESCLQVHR-- 188
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
E + SS + +IFGG +SQ+KCL C S+ D +D+ LDI ++
Sbjct: 189 -----------QSEPTSEDSSPIHDIFGGWWRSQIKCLLCQGTSDTYDPFLDVPLDISSA 237
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+ + E L G N Y C C++ + A K + + +P +L++ LKRF G K
Sbjct: 238 QSVNQALWDTEKSEELHGENAYYCGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGNK 297
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+D+ +++ E L L ++ + + P P Y L+ +VH G + SGHY+ +K G+WY
Sbjct: 298 LDRKVSYPEFLDLKPYLSQPTAGPLP-YALYAVLVHDGATCHSGHYFCCVKAGHGKWYKM 356
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRAN 354
+D+ V+ + VL+E Y+LF+++ N
Sbjct: 357 DDTKVTRCDVTSVLNENAYVLFYVQQN 383
>gi|359496742|ref|XP_003635320.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Vitis
vinifera]
Length = 860
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 144/424 (33%), Positives = 222/424 (52%), Gaps = 51/424 (12%)
Query: 1 MGLAHELQM---SWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLK 57
M +EL M SW+ LS P GL N GNSCY N+VLQCLT+T PLA++ L+
Sbjct: 375 MLFPYELFMELYSWEKVELS--------PFGLMNCGNSCYANAVLQCLTFTRPLASYLLQ 426
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
HS C ++ C C E I+ + L +P I S ++ H
Sbjct: 427 GLHSKACP-----------KEDWCFICEFECLILEAREGKSPL-SPMGILSQIQRIGSHL 474
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
GR+EDAHEFLRY +D + CL K G G + +++V FGG
Sbjct: 475 GHGREEDAHEFLRYAVDTMQSVCL-------KDTGVVG------PLAEDTTLVGLTFGGY 521
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKK 236
L S++KC+ C +S + + +MD++++I +L+EA+ +F E+LDG NKY+C C+
Sbjct: 522 LLSKIKCMKCRGKSERCERMMDLTVEIDGDIGTLEEALAQFTATEILDGENKYQCGRCRS 581
Query: 237 LVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYK 296
A+K++ +L++PNIL I LKRF+ GK++K++ F E L ++ +M + D P Y
Sbjct: 582 YEKAKKKLMVLEAPNILTIVLKRFQSSNFGKLNKSVRFPETLNMTPYM-SGTDDRYPVYS 640
Query: 297 LFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRAN 354
L+ +VH + SGHY ++K+ +G W+ +DS V+ L VL E Y+L + R +
Sbjct: 641 LYAVVVHLDIMNAAFSGHYVCFVKN-LGDWFRIDDSTVTPVELDRVLLEGAYMLLYARRS 699
Query: 355 QRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPST-ISKVEK 413
+P + + N SHE GK + ++ VP ATKP +S+ P S +++
Sbjct: 700 PKPPA----LSRNMAVSHE-GKLKMRNLEA-VPSSLAATKP---RSNSAVPGVDRSMIQR 750
Query: 414 VPSN 417
P N
Sbjct: 751 KPEN 754
>gi|219841872|gb|AAI45563.1| Usp-ps protein [Mus musculus]
Length = 540
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 177/327 (54%), Gaps = 29/327 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N GNSCYLN+ LQCLT+TPPLA++ L +HS C G C C +E
Sbjct: 85 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEG-----------CKMCAME 133
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ +SL + D I +I F +QEDAHEFL + ++ H +CL++ +
Sbjct: 134 AHVTQSLLHTHSGD----IMKPSQILTSAFHKYQQEDAHEFLMFTLETMHESCLQVHR-- 187
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
E + SS + +IFGG +SQ+KCL C S+ D +D+ LDI ++
Sbjct: 188 -----------QSEPTSEDSSPIHDIFGGWWRSQIKCLLCQGTSDTYDPFLDVPLDISSA 236
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+ + E L G N Y C C++ + A K + + +P +L++ LKRF G K
Sbjct: 237 QSVNQALWDTEKSEELHGENAYYCGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGNK 296
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+D+ +++ E L L ++ + + P P Y L+ +VH G + SGHY+ +K G+WY
Sbjct: 297 LDRKVSYPEFLDLKPYLSQPTAGPLP-YALYAVLVHDGATCHSGHYFCCVKAGHGKWYKM 355
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRAN 354
+D+ V+ + VL+E Y+LF+++ N
Sbjct: 356 DDTKVTRCDVTSVLNENAYVLFYVQQN 382
>gi|384252944|gb|EIE26419.1| cysteine proteinase [Coccomyxa subellipsoidea C-169]
Length = 840
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 124/328 (37%), Positives = 177/328 (53%), Gaps = 47/328 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNSVLQCLT+TPPLA L + G +A E F L
Sbjct: 41 GLENLGNTCFLNSVLQCLTHTPPLAEVLL-------SNRPLGSAA-------EWDFLRLT 86
Query: 88 K-RIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
+ ++R+L + +P + LR F+ GRQEDAHE+L ++DA H L
Sbjct: 87 QLHVMRALHNRSRVISPRPHANGLRRICRSFRRGRQEDAHEYLVALLDAMHEAAL----- 141
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
+G + +VKC CG ESN ++ MDI LDI
Sbjct: 142 -------AG------------------YNPKPSREVKCCECGYESNTMESFMDICLDIGR 176
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE-GIFG 265
+ SL A++++ +PE+LD NKYKC +LV ARK ++I + PN+LV QLKRFE ++G
Sbjct: 177 AGSLAHALERYTKPEMLDRENKYKCPKQGRLVRARKTITIERVPNVLVFQLKRFEYSMYG 236
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KI K + F L ++ +M PQ Y+LFG +VH+G S SGHY+ +++ G W+
Sbjct: 237 SKIGKKVDFYTHLDMAPYMSNRRAGPQ-MYELFGVLVHAGHSVHSGHYFCFVRAPNGLWH 295
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIRA 353
+D VS + + VL +K YILF+IR+
Sbjct: 296 RMDDVQVSQVSERVVLGQKAYILFYIRS 323
>gi|18424054|ref|NP_568873.1| ubiquitin carboxyl-terminal hydrolase 23 [Arabidopsis thaliana]
gi|166201350|sp|Q9FPS4.2|UBP23_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 23; AltName:
Full=Deubiquitinating enzyme 23; Short=AtUBP23; AltName:
Full=Ubiquitin thioesterase 23; AltName:
Full=Ubiquitin-specific-processing protease 23
gi|332009599|gb|AED96982.1| ubiquitin carboxyl-terminal hydrolase 23 [Arabidopsis thaliana]
Length = 859
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 133/395 (33%), Positives = 202/395 (51%), Gaps = 52/395 (13%)
Query: 20 RKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKR 79
RK G GL+NLGN+C+LNSVLQCLTYT PLA H C + G
Sbjct: 103 RKIGA---GLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKYC-HVAGF--------- 149
Query: 80 ECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNT 139
C C ++K + + + + AP + S LR + +F+ RQEDAHE++ +++ H
Sbjct: 150 -CALCAIQKHVRTARQANGRILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMHKC 208
Query: 140 CLRLKKLRRKGGGSSGGGGGGETING-GSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
L G E+ + S+V +IFGG+L+SQVKC C SNK D +
Sbjct: 209 SL-------------PSGVPSESSDAYRRSLVHKIFGGSLRSQVKCEQCSHCSNKFDPFL 255
Query: 199 DISLDILNSCSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQL 257
D+SLDI + SL+ A+ +F E+LD K Y+C+ CK+ V A+KQ+++ ++P +L + L
Sbjct: 256 DLSLDISKADSLQRALSRFTAVELLDNGAKVYQCERCKQKVKAKKQLTVSKAPYVLTVHL 315
Query: 258 KRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYI 317
KRFE KID+ + F + + F+ + +Y L+G +VH G S SGHY ++
Sbjct: 316 KRFEAHRSEKIDRKVDFTSAIDMKPFV-SGPHEGNLKYTLYGVLVHYGRSSHSGHYACFV 374
Query: 318 KDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANG-------TFASN--- 367
+ + G WY +D+ V + + V ++K Y+LF++R Q V N +FA+N
Sbjct: 375 RTSSGMWYSLDDNRVVQVSEKTVFNQKAYMLFYVRDRQNAVPKNSVPVVKKESFATNRAS 434
Query: 368 -----GVKSHENGKEAYKG-------VKGTVPLKA 390
+K NG K G PLK+
Sbjct: 435 LIVASNIKDQVNGSTVIKECGFGALVANGLAPLKS 469
>gi|348560035|ref|XP_003465820.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Cavia
porcellus]
Length = 435
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 171/325 (52%), Gaps = 62/325 (19%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C++N+ LQCLTYTPPLAN+ L +H+ C
Sbjct: 98 GLQNLGNTCFVNAALQCLTYTPPLANYMLSREHTKTC----------------------- 134
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
A HF+ G QEDAHEFL+Y +DA CL+
Sbjct: 135 -------------------------IASHFRFGNQEDAHEFLQYTLDAMQEACLQ----- 164
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + ++++ +IFGG L+S+VKCL C S+ D +D++L+I +
Sbjct: 165 --------GSYELDRHTQATTLIYQIFGGYLRSRVKCLNCRGVSDTFDLYLDVTLEIQDV 216
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ EA+ +F +PE L+G N YKC C +V A K +SI + N+L + LKRF G K
Sbjct: 217 RSVNEALAQFVKPEQLEGENCYKCSKCNSMVPASKSLSIHRPSNVLTLSLKRFSNCTGSK 276
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + ++M + S + +Y L+ +VH+G GHY++Y+K + G WY
Sbjct: 277 IAKIVKYPEHLNIRAYMSQPSGEAM-QYSLYAVLVHTGSKCCVGHYFSYVKASNGLWYQM 335
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR 352
ND VS S + VLS++ YILF+IR
Sbjct: 336 NDFMVSPSDISSVLSQQAYILFYIR 360
>gi|300681222|sp|Q7M764.2|U17L2_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17;
Short=USP17; AltName: Full=Deubiquitinating enzyme
17-like protein 2; AltName: Full=Deubiquitinating
protein 3; Short=DUB-3; AltName: Full=Deubiquitinating
protein 6; AltName: Full=Ubiquitin carboxyl-terminal
hydrolase 17-like protein 2; AltName: Full=Ubiquitin
thioesterase 17-like protein 2; AltName:
Full=Ubiquitin-specific-processing protease 17-like
protein 2
Length = 540
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 178/329 (54%), Gaps = 29/329 (8%)
Query: 24 GPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPF 83
GP GL+N GNSCYLN+ LQCLT+TPPLA++ L +HS C G C
Sbjct: 82 GPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEG-----------CKM 130
Query: 84 CILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
C +E + +SL + D Q F +H +QEDAHEFL + ++ H +CL++
Sbjct: 131 CAMEAHVTQSLLHSHSGDVMKPSQILTSAFHKH----QQEDAHEFLMFTLETMHESCLQV 186
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
+ + +S + +IFGG +SQ+KCL C S+ D +D+ LD
Sbjct: 187 HR-------------QSDPTPQDTSPIHDIFGGWWRSQIKCLHCQGTSHTFDPFLDVPLD 233
Query: 204 ILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI 263
I ++ S+ +A+ + E L G N Y C C++ + A K + + +P +L++ LKRF
Sbjct: 234 ISSAQSVNQALWDTGKSEELLGENAYYCGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAF 293
Query: 264 FGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR 323
G K+D+ +++ E L L ++ + + P P Y L+ +VH G + +SGHY+ +K G+
Sbjct: 294 TGNKLDRKVSYPEFLDLKPYLSEPTGGPLP-YALYAVLVHDGATSNSGHYFCCVKAGHGK 352
Query: 324 WYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
WY +D+ V+ + VL+E Y+LF+++
Sbjct: 353 WYKMDDTKVTRCDVTSVLNENAYVLFYVQ 381
>gi|379698859|ref|NP_001243902.1| ubiquitin carboxyl-terminal hydrolase 17 [Mus musculus]
Length = 540
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 178/329 (54%), Gaps = 29/329 (8%)
Query: 24 GPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPF 83
GP GL+N GNSCYLN+ LQCLT+TPPLA++ L +HS C G C
Sbjct: 82 GPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEG-----------CKM 130
Query: 84 CILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
C +E + +SL + D Q F +H +QEDAHEFL + ++ H +CL++
Sbjct: 131 CAMEAHVTQSLLHSHSGDVMKPSQILTSAFHKH----QQEDAHEFLMFTLETMHESCLQV 186
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
+ + +S + +IFGG +SQ+KCL C S+ D +D+ LD
Sbjct: 187 HR-------------QSDPTPQDTSPIHDIFGGWWRSQIKCLHCQGTSHTFDPFLDVPLD 233
Query: 204 ILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI 263
I ++ S+ +A+ + E L G N Y C C++ + A K + + +P +L++ LKRF
Sbjct: 234 ISSAQSVNQALWDTGKSEELLGENAYYCGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAF 293
Query: 264 FGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR 323
G K+D+ +++ E L L ++ + + P P Y L+ +VH G + +SGHY+ +K G+
Sbjct: 294 TGNKLDRKVSYPEFLDLKPYLSEPTGGPLP-YALYAVLVHDGATSNSGHYFCCVKAGHGK 352
Query: 324 WYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
WY +D+ V+ + VL+E Y+LF+++
Sbjct: 353 WYKMDDTKVTRCDVTSVLNENAYVLFYVQ 381
>gi|187954679|gb|AAI40989.1| Deubiquitinating enzyme 1 [Mus musculus]
Length = 526
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 115/339 (33%), Positives = 184/339 (54%), Gaps = 30/339 (8%)
Query: 24 GPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPF 83
GP GL+N GNSCYLN+ LQCLT+TPPLA++ L +HS C G C
Sbjct: 48 GPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEG-----------CKM 96
Query: 84 CILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
C +E + +SL + D + I F +QEDAHEFL + ++ H +CL++
Sbjct: 97 CAMEAHVTQSLLHSHSGD----VMKPSHILTSAFHKHQQEDAHEFLMFTLETMHESCLQV 152
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
+ + + SS + +IFGG +SQ+KCL C S+ D +DI LD
Sbjct: 153 HRQSK-------------PTSEDSSPIHDIFGGWWRSQIKCLLCQGTSDTYDCFLDIPLD 199
Query: 204 ILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI 263
I ++ S+K+A+ + E L G+N Y C C++ + A K + + +P +L++ L RF
Sbjct: 200 ISSAQSVKQALWDTEKSEELCGDNAYYCGKCREKMPASKTLHVHIAPKVLMVVLNRFSAF 259
Query: 264 FGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR 323
G K+D+ +++ E L L ++ + + P P Y L+ +VH G + SGHY+ +K G+
Sbjct: 260 TGNKLDRKVSYPEFLDLKPYLSEPTGGPLP-YALYAVLVHDGATSHSGHYFCCVKAGHGK 318
Query: 324 WYCCNDSYVSVSTLQEVLSEKVYILFFI-RANQRPVSAN 361
WY +D+ V+ + VL+E Y+LF++ +AN + VS +
Sbjct: 319 WYKMDDTKVTRCDVTSVLNENAYVLFYVQQANLKQVSID 357
>gi|356497712|ref|XP_003517703.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Glycine
max]
Length = 927
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 213/394 (54%), Gaps = 36/394 (9%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N+VLQCL YT PL ++ + HS C ++K C C
Sbjct: 411 PFGLTNCGNSCYANAVLQCLAYTRPLTSYLFQGFHSKRC-----------QKKGWCFTCE 459
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
E +++ ++ +P I S + H G++EDAHEFLR +D + CL+
Sbjct: 460 FE-YLIQKAKEGISPLSPIGILSKIHKIGSHLGRGKEEDAHEFLRCAVDTMQSVCLK--- 515
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
G + +++V FGG L+S++KCL C +S + + +MD++++I
Sbjct: 516 ----------EVGVSSPLAEETTLVGYTFGGYLRSKIKCLRCLGKSERYERMMDLTVEID 565
Query: 206 NSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
+L+EA+ +F PE+LD +NKY C CK ARK++++L++PNIL I LKRF+
Sbjct: 566 GDIGTLEEALGQFTAPEILDKDNKYNCSRCKTYEKARKKLTVLEAPNILTIVLKRFQSGN 625
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIG 322
K++K++ F EVL ++ +M ++D P Y L+ +VH + SGHY Y+K+ G
Sbjct: 626 FEKLNKSVQFPEVLNMAPYM-SGTKDKSPLYSLYAVVVHLDIMNAAFSGHYVCYVKNIQG 684
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKSHENGKEAYKGV 382
W+ +DS V L VLSE+ Y+L + R + +P+ G +SN + S GK + +
Sbjct: 685 EWFRTDDSRVEPVELSRVLSERAYMLLYARHSPKPL---GLVSSNVISS--AGKFKRRNL 739
Query: 383 KGTVPLKAVATKPSAEQSSRKTPSTISKVEKVPS 416
+ +P + T+ ++ +S ++PS K K P+
Sbjct: 740 EA-IPASS-KTRSNSMATSGESPSLQQKHGKYPN 771
>gi|41019553|tpe|CAD66057.1| TPA: mouse deubiquitinating enzyme 6 [Mus musculus]
Length = 505
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 178/329 (54%), Gaps = 29/329 (8%)
Query: 24 GPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPF 83
GP GL+N GNSCYLN+ LQCLT+TPPLA++ L +HS C G C
Sbjct: 47 GPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEG-----------CKM 95
Query: 84 CILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
C +E + +SL + D Q F +H +QEDAHEFL + ++ H +CL++
Sbjct: 96 CAMEAHVTQSLLHSHSGDVMKPSQILTSAFHKH----QQEDAHEFLMFTLETMHESCLQV 151
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
+ + +S + +IFGG +SQ+KCL C S+ D +D+ LD
Sbjct: 152 HR-------------QSDPTPQDTSPIHDIFGGWWRSQIKCLHCQGTSHTFDPFLDVPLD 198
Query: 204 ILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI 263
I ++ S+ +A+ + E L G N Y C C++ + A K + + +P +L++ LKRF
Sbjct: 199 ISSAQSVNQALWDTGKSEELLGENAYYCGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAF 258
Query: 264 FGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR 323
G K+D+ +++ E L L ++ + + P P Y L+ +VH G + +SGHY+ +K G+
Sbjct: 259 TGNKLDRKVSYPEFLDLKPYLSEPTGGPLP-YALYAVLVHDGATSNSGHYFCCVKAGHGK 317
Query: 324 WYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
WY +D+ V+ + VL+E Y+LF+++
Sbjct: 318 WYKMDDTKVTRCDVTSVLNENAYVLFYVQ 346
>gi|449453974|ref|XP_004144731.1| PREDICTED: uncharacterized protein LOC101219654 [Cucumis sativus]
Length = 933
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 123/327 (37%), Positives = 181/327 (55%), Gaps = 25/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+LNSVLQCLTYT PLA + +H + C + G C C ++
Sbjct: 102 GLQNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHQNSC-HVAG----------FCALCAIQ 150
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
K + R+L + AP + S LR + +F+ RQEDAHE++ ++++ H CL L
Sbjct: 151 KHVSRALQSSGRILAPKDLVSNLRCISRNFRNARQEDAHEYMVNLLESMHKCCLPL---- 206
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G S E S+V +IFGG L+SQVKC+ C SNK D +D+SLDI+ +
Sbjct: 207 ---GLPSESPSAYE-----KSLVHKIFGGRLRSQVKCMQCSFCSNKFDPFLDLSLDIVKA 258
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKL-VSARKQMSILQSPNILVIQLKRFEGI-FG 265
S+ +A + F PE+LDG + K V A KQ ++ ++P +L I LKRF+
Sbjct: 259 DSIYKAFKNFTTPELLDGGERQYQCQQCKQKVKALKQFTVHKAPYVLTIHLKRFQSYNLE 318
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KI K I F L L+ F+ + D +Y L+G +VH G S SGHYY Y++ + WY
Sbjct: 319 EKIHKKIHFGPTLDLAPFVSGSYADGDLKYTLYGVLVHHGGSTRSGHYYCYVRTSSAMWY 378
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ VS + V ++ Y+LF++R
Sbjct: 379 ALDDNRVSHVGDRTVYEQQAYMLFYVR 405
>gi|392337921|ref|XP_001074389.3| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase DUB-1 [Rattus norvegicus]
Length = 549
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 187/347 (53%), Gaps = 31/347 (8%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
EL +PSL ++ + P GL+N+GNSCYLN+VLQCLT+TPPLA++ L +HS C
Sbjct: 77 ELSAKGKPSLSLQRIQ--SPGSGLQNIGNSCYLNAVLQCLTHTPPLADYMLSQEHSQRCC 134
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
G C C +E + +SL + I F RQEDA
Sbjct: 135 YPEG-----------CKMCAMEAHVTQSL----LHSHSGGVMKPSEILTSTFHKHRQEDA 179
Query: 126 HEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
HEFL + ++A H +CLR G ET + SS++ +IFGG ++SQ+KC
Sbjct: 180 HEFLMFTLNAMHESCLR-------------GCKQSETSSKDSSLIYDIFGGQMRSQIKCH 226
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
C + D +++ LDI ++ S+K+A++ + E L G+N Y C C++ + A K
Sbjct: 227 HCQGTLDSYDPFLNLFLDICSAQSVKQALEDLVKLEELQGDNAYYCGRCREKMPASKTTK 286
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
+ + +L++ L R G K+++ +++ E L L ++ + + P P Y L+ +VH G
Sbjct: 287 VQTASKVLLLVLNRSYDFGGDKLNRVVSYPEYLDLQPYLSQPTAGPLP-YALYAVLVHDG 345
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+ SGHY+ Y+K + G+WY +DS V+ + VLSE Y+LF+++
Sbjct: 346 VTCSSGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFYVQ 392
>gi|379030637|ref|NP_001243803.1| inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4
[Homo sapiens]
gi|187663999|sp|A6NCW7.3|U17L4_HUMAN RecName: Full=Inactive ubiquitin carboxyl-terminal hydrolase
17-like protein 4
Length = 530
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 181/328 (55%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY N+ LQCLTYT PLAN+ L +HS C +R + C C ++
Sbjct: 81 GLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTC-----------QRPKCCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I L +P + + A F G+QED HEFL + +DA CL
Sbjct: 130 AHIT------WALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+K+A+++ +PE L+G N Y C C + A +++ S +L++ LKRF + G K
Sbjct: 231 QSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + +M + + P Y L+ +VH+G+S G+Y++Y+K G+WY
Sbjct: 291 LAKNVQYPECLDMQPYMSQQNTGPL-VYVLYAVLVHAGWSCHDGYYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+V ++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTVCSITSVLSQQAYVLFYIQKSE 377
>gi|74140773|dbj|BAC40791.2| unnamed protein product [Mus musculus]
Length = 467
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 177/327 (54%), Gaps = 29/327 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N GNSCYLN+ LQCLT+TPPLA++ L +HS C G C C +E
Sbjct: 52 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEG-----------CKMCAME 100
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ +SL + D I +I F +QEDAHEFL + ++ H +CL++ +
Sbjct: 101 AHVTQSLLHTHSGD----IMKPSQILTSAFHKYQQEDAHEFLMFTLETMHESCLQVHR-- 154
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
E + SS + +IFGG +SQ+KCL C S+ D +D+ LDI ++
Sbjct: 155 -----------QSEPTSEDSSPIHDIFGGWWRSQIKCLLCQGTSDTYDPFLDVPLDISSA 203
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+ + E L G N Y C C++ + A K + + +P +L++ LKRF G K
Sbjct: 204 QSVNQALWDTEKSEELHGENAYYCGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGNK 263
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+D+ +++ E L L ++ + + P P Y L+ +VH G + SGHY+ +K G+WY
Sbjct: 264 LDRKVSYPEFLDLKPYLSQPTAGPLP-YALYAVLVHDGATCHSGHYFCCVKAGHGKWYKM 322
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRAN 354
+D+ V+ + VL+E Y+LF+++ N
Sbjct: 323 DDTKVTRCDVTSVLNENAYVLFYVQQN 349
>gi|392344528|ref|XP_001071809.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein 2
[Rattus norvegicus]
Length = 832
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 187/347 (53%), Gaps = 31/347 (8%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
EL +PSL ++ + G GL+N+GNSCYLN+VLQCLT+TPPLA++ L +HS C
Sbjct: 360 ELSAKGKPSLSLQRIQSPGS--GLQNIGNSCYLNAVLQCLTHTPPLADYMLSQEHSQRCC 417
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
G C C +E + +SL + I F RQEDA
Sbjct: 418 YPEG-----------CKMCAMEAHVTQSL----LHSHSGGVMKPSEILTSTFHKHRQEDA 462
Query: 126 HEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
HEFL + ++A H +CLR G ET + SS++ +IFGG ++SQ+KC
Sbjct: 463 HEFLMFTLNAMHESCLR-------------GCKQSETSSKDSSLIYDIFGGQMRSQIKCH 509
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
C + D +++ LDI ++ S+K+A++ + E L G+N Y C C++ + A K
Sbjct: 510 HCQGTLDSYDPFLNLFLDICSAQSVKQALEDLVKLEELQGDNAYYCGRCREKMPASKTTK 569
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
+ + +L++ L R G K+++ +++ E L L ++ + + P P Y L+ +VH G
Sbjct: 570 VQTASKVLLLVLNRSYDFGGDKLNRVVSYPEYLDLQPYLSQPTAGPLP-YALYAVLVHDG 628
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+ SGHY+ Y+K + G+WY +DS V+ + VLSE Y+LF+++
Sbjct: 629 VTCSSGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFYVQ 675
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 109/209 (52%), Gaps = 30/209 (14%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
EL +PSL ++ + G GL+N+GNSCYLN+VLQCLT+TPPLA++ L +HS C
Sbjct: 32 ELSAKGKPSLSLQRIQSPGS--GLQNIGNSCYLNAVLQCLTHTPPLADYMLSQEHSQRCC 89
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
G C C +E + +S L + I F RQED+
Sbjct: 90 YPEG-----------CKMCAMEAHVTQS----LLHSHSGGVMKPSEILTSTFHKHRQEDS 134
Query: 126 HEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
HEFL + ++A H +CLR G ET + SS++ +IFGG ++SQ+KC
Sbjct: 135 HEFLMFTLNAMHESCLR-------------GCKQSETSSKDSSLIYDIFGGQMRSQIKCH 181
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAM 214
C + D +++ LDI ++ S+K+A+
Sbjct: 182 HCQGTLDSYDPFLNLFLDICSAQSVKQAL 210
>gi|336373694|gb|EGO02032.1| hypothetical protein SERLA73DRAFT_49755 [Serpula lacrymans var.
lacrymans S7.3]
Length = 337
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/325 (37%), Positives = 174/325 (53%), Gaps = 26/325 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N GN+C+LNS LQCL +TPPL + + C+ TG C C L
Sbjct: 39 GLHNTGNTCFLNSALQCLLHTPPLLHIISAHSKADPCRVKTG----------FCMSCNLR 88
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ V + + P I + L+ A+H K GRQED+HEFLRY IDA +CL
Sbjct: 89 QVAVEAHATKRAF-VPYPITTKLQTIAKHMKRGRQEDSHEFLRYAIDALQKSCL------ 141
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+G + ++ V IFGG L+S+V C C S+ D I+D+SLDI
Sbjct: 142 ------AGYPPKLDPKVAETTWVHRIFGGHLRSRVTCRECQHNSDTFDSILDLSLDIYGV 195
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+KEA++KF + L G++KYKC+ CKK V A K+ ++ +P +L + LKRF + G K
Sbjct: 196 ASIKEALRKFVAVDYLKGSDKYKCEKCKKAVIAEKRFTVHDAPVVLTVHLKRFSPL-GRK 254
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I + +++ L L M + P Y L+G I H+G P+SGHYYA++K G+WY
Sbjct: 255 IGHYVKYDDRLGLQPIMSEGQFG--PSYSLYGVICHAGGGPNSGHYYAHVKGGNGQWYEM 312
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR 352
ND VS V + Y+LF+IR
Sbjct: 313 NDGMVSSQRNSPVGMKNAYMLFYIR 337
>gi|224056573|ref|XP_002298917.1| predicted protein [Populus trichocarpa]
gi|222846175|gb|EEE83722.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/335 (39%), Positives = 182/335 (54%), Gaps = 26/335 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N+VLQCLT T PL F L+ HS C K C C
Sbjct: 350 PRGLVNCGNSCYANAVLQCLTCTKPLIIFLLRRSHSRACCG-----------KDWCLMCE 398
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
LE+ ++ L +P++I +R G QEDAHEFLR +I + + CL
Sbjct: 399 LEQHVMMLRECGGPL-SPSRILLHMRKINCQIGDGSQEDAHEFLRLLIASMQSICLE--- 454
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
R GG ET + ++ FGG L+S+VKCL C ES + + IMD++L+I
Sbjct: 455 --RLGGEDKVDPRLQET-----TFIQHTFGGLLRSKVKCLRCHHESERYENIMDLTLEIF 507
Query: 206 NSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
SL++A+ +F PE LDG N Y+C C V ARKQ+SI ++PNIL I LKRF+
Sbjct: 508 GWVESLEDALTQFTTPEELDGENMYRCGRCAAYVRARKQLSIHEAPNILTIVLKRFQEGK 567
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH--SGFSPDSGHYYAYIKDAIG 322
GKI+K I F ++L + FM P P Y L+ +VH + + SGHY AY+KD G
Sbjct: 568 YGKINKCITFPDMLDMIPFMTGMGDVP-PLYMLYAVVVHLDTLNASFSGHYVAYVKDLRG 626
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
W+ +D+ V ++ +V+ E YILF+ R+ RP
Sbjct: 627 SWFKIDDTEVHPVSMSQVMLEGAYILFYKRSCTRP 661
>gi|242096572|ref|XP_002438776.1| hypothetical protein SORBIDRAFT_10g026010 [Sorghum bicolor]
gi|241916999|gb|EER90143.1| hypothetical protein SORBIDRAFT_10g026010 [Sorghum bicolor]
Length = 979
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/335 (38%), Positives = 176/335 (52%), Gaps = 25/335 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSC+ N VLQCL+ T PL ++ L HS C D C C
Sbjct: 185 PCGLMNCGNSCFANVVLQCLSCTRPLVSYLLGKDHSRECSMRHED---------WCFLCE 235
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
L+ I R+ S L AP I S L + GRQEDAHEF+R+ ID + CL
Sbjct: 236 LQCHIHRA-SGSLHPFAPTNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACLD--- 291
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
GG + +++++ IFGG LQSQV+C ACG SN+ D +MD++++I
Sbjct: 292 -------EYGGEKAVDLSTQETTIIQHIFGGRLQSQVQCTACGMVSNRYDNMMDLTVEIQ 344
Query: 206 NSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
SL++ + +F E LDG+NKYKCD C V ARK +S+ Q+PNIL I LKRF+
Sbjct: 345 GDAESLEKCLDQFTAIEWLDGDNKYKCDGCNDYVKARKHLSVHQAPNILTITLKRFQSGR 404
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYIKDAIG 322
GK++K + F L L+ + + D Y L+ +VH S GHY YIK G
Sbjct: 405 FGKLNKRVTFPMELDLTPYT--SCTDGSDLYDLYAVVVHLDMLNASFFGHYICYIKGYQG 462
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
RWY +D V V +EV ++ Y+L + R RP
Sbjct: 463 RWYKIDDCKVMVVDEEEVHAQGAYMLLYSRRTARP 497
>gi|413943501|gb|AFW76150.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 944
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/337 (38%), Positives = 175/337 (51%), Gaps = 25/337 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSC+ N VLQCL+ T PL + L HS C + C C
Sbjct: 191 PCGLMNCGNSCFANVVLQCLSCTRPLVAYLLGKDHSRECS---------VRHEDWCFLCE 241
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
L+ I R+ S L AP I S L + GRQEDAHEF+R+ ID + CL
Sbjct: 242 LQCHIQRA-SGSLHPFAPTNILSHLPNIGGNLGVGRQEDAHEFMRFAIDKMQSACL---- 296
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
GG + +++++ IFGG LQSQV+C CG SN+ D +MD++++I
Sbjct: 297 ------DEYGGEKAVDLSIQETTIIQHIFGGRLQSQVQCTTCGMVSNRYDNMMDLTVEIQ 350
Query: 206 NSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
SL+ + +F E LDG+NKYKCD C V ARK +S+ Q+PNIL I LKRF+
Sbjct: 351 GDAESLERCLDQFTAVEWLDGDNKYKCDGCNDYVKARKHLSVQQAPNILTITLKRFQTGR 410
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYIKDAIG 322
GK++K + F L L+ +M + D Y L+ +VH S GHY YIK G
Sbjct: 411 FGKLNKRVTFPMELDLTPYM--SCTDGSDLYDLYAVVVHLDMLNASFFGHYICYIKGYQG 468
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVS 359
RWY +D V V +EV ++ Y+L + R RP S
Sbjct: 469 RWYKIDDCKVMVVDEEEVHAQGAYMLLYSRRTARPRS 505
>gi|242049526|ref|XP_002462507.1| hypothetical protein SORBIDRAFT_02g026980 [Sorghum bicolor]
gi|241925884|gb|EER99028.1| hypothetical protein SORBIDRAFT_02g026980 [Sorghum bicolor]
Length = 867
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/351 (35%), Positives = 186/351 (52%), Gaps = 28/351 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL NLGNSCY N VLQCL +T PL + L+ HS C + C C
Sbjct: 353 PFGLYNLGNSCYANVVLQCLAFTRPLTAYLLEGHHSQNCS-----------KNEWCFMCE 401
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
LEK ++ +L +P I L F G +EDAHEFLRY ID + ++ K
Sbjct: 402 LEKVLIEGKH-GKSLVSPTGILCHLNEIGVSFGHGAEEDAHEFLRYAIDKMQSASIKEAK 460
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
G + + +++V IFGG L+S++KC C S + + I+D++++I
Sbjct: 461 -----------KNGIQQLAEETTLVHFIFGGYLRSKIKCTKCQVSSKQSERILDLTVEID 509
Query: 206 NSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
+L A+++F EVLDG+N+Y C C A+K+++IL++PNIL I LKR++
Sbjct: 510 GDINTLDGALRRFTSSEVLDGDNRYHCSRCNSYERAQKKLTILEAPNILTIALKRYQSGV 569
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPD--SGHYYAYIKDAIG 322
G+ K + F E L LS +M + + D P Y L+ +VH S SGHY Y+KD+ G
Sbjct: 570 LGETSKVVKFPEHLNLSQYMSR-TDDSSPVYTLYAVVVHHNVSNATVSGHYVCYVKDSQG 628
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR-PVSANGTFASNGVKSH 372
+W+ +D+ V ++Q+VLS+ Y+L + R + R P A G G SH
Sbjct: 629 KWHEMDDNKVKPVSIQKVLSKCAYMLLYARISPRAPTGARGAMLRQGASSH 679
>gi|297735922|emb|CBI18698.3| unnamed protein product [Vitis vinifera]
Length = 669
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/358 (36%), Positives = 193/358 (53%), Gaps = 31/358 (8%)
Query: 1 MGLAHELQM---SWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLK 57
M +EL M SW+ LS P GL N GNSCY N+VLQCLT+T PLA++ L+
Sbjct: 337 MLFPYELFMELYSWEKVELS--------PFGLMNCGNSCYANAVLQCLTFTRPLASYLLQ 388
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
HS CK L E C C E I+ + L +P I S ++ H
Sbjct: 389 GLHSKACKFLFMTPLCPKED--WCFICEFECLILEAREGKSPL-SPMGILSQIQRIGSHL 445
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
GR+EDAHEFLRY +D + CL K G G + +++V FGG
Sbjct: 446 GHGREEDAHEFLRYAVDTMQSVCL-------KDTGVVG------PLAEDTTLVGLTFGGY 492
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKK 236
L S++KC+ C +S + + +MD++++I +L+EA+ +F E+LDG NKY+C C+
Sbjct: 493 LLSKIKCMKCQGKSERCERMMDLTVEIDGDIGTLEEALAQFTATEILDGENKYQCGRCRS 552
Query: 237 LVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYK 296
A+K++ +L++PNIL I LKRF+ GK++K++ F E L L+ +M + D P Y
Sbjct: 553 YEKAKKKLMVLEAPNILTIVLKRFQSSNFGKLNKSVRFPETLNLTPYM-SGTDDRYPVYS 611
Query: 297 LFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
L+ +VH + SGHY ++K+ +G W+ +DS V+ L VL E Y+L + R
Sbjct: 612 LYAVVVHLDIMNAAFSGHYVCFVKNFLGDWFRIDDSTVTPVELDRVLLEGAYMLLYAR 669
>gi|409079510|gb|EKM79871.1| hypothetical protein AGABI1DRAFT_23476, partial [Agaricus bisporus
var. burnettii JB137-S8]
gi|426192538|gb|EKV42474.1| hypothetical protein AGABI2DRAFT_53097, partial [Agaricus bisporus
var. bisporus H97]
Length = 309
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 123/328 (37%), Positives = 182/328 (55%), Gaps = 36/328 (10%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKREC-PFCIL 86
GL N GN+C+LNS LQCL +TPPL + + K +C PFC++
Sbjct: 15 GLYNTGNTCFLNSALQCLLHTPPLLR------------------QVFSHNKEKCKPFCMV 56
Query: 87 --EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLK 144
+++ + +P+ + L+ A+H + GRQED+HEFLRY IDA +CL
Sbjct: 57 CAFRQVTVQAHKGSSPFSPSPVSGRLQTIAKHMRRGRQEDSHEFLRYAIDAMQKSCL--- 113
Query: 145 KLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI 204
+G E G ++ V +IFGG L+S+V C C S+ D I+D+SLDI
Sbjct: 114 ---------AGFPPKAEAKLGEATWVHKIFGGRLRSRVSCQNCDHNSDTFDRILDLSLDI 164
Query: 205 LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
+ + SLKEA++ F P+ L G +KYKC+ CKK V+A K+ +I ++P++L + LKRF +
Sbjct: 165 MRADSLKEALRSFISPDFLKGADKYKCEKCKKHVNAEKRFTIHEAPSVLTVHLKRFSPL- 223
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRW 324
G KI + ++E L L +M K Y L+G I H+G P+SGHY+A++K GRW
Sbjct: 224 GRKIGHHVIYDEHLNLQPYMSKGQYGFT--YSLYGVICHAGGGPNSGHYFAFVKSRSGRW 281
Query: 325 YCCNDSYVSVSTLQEVLSEKVYILFFIR 352
Y ND S + V + YILF++R
Sbjct: 282 YEMNDEMASPISGPPVSKKTAYILFYMR 309
>gi|344297603|ref|XP_003420486.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Loxodonta
africana]
Length = 621
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/375 (32%), Positives = 195/375 (52%), Gaps = 34/375 (9%)
Query: 14 SLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSAL 73
+L S + G GLRN+G++CY+N+ LQCLTYTPPLA++ L +H++ C Q
Sbjct: 63 TLASTWSRSSGVGAGLRNMGDTCYVNAALQCLTYTPPLADYMLSREHAASCGQ------- 115
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
+ C C ++ I R+LS P + A +QEDAHEFL +
Sbjct: 116 ----QGYCVLCAMQDHITRALS------HPGDVMEPSHALARGLHRHQQEDAHEFLMSTL 165
Query: 134 DACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNK 193
DA CLR + R ++ +++++ IFGG +S+++C C S+
Sbjct: 166 DAVQKACLRSYRHLRG-------------LSEDTTLIRRIFGGYWRSRIQCRHCQGVSDT 212
Query: 194 VDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
D +DI+LDI + S+ +A+++ E LDG N Y+C C++ + A K +++ P L
Sbjct: 213 FDPYLDITLDIQAAQSVNQALEQLVTAEELDGENSYQCRICQRKMPASKTLTLHTCPEAL 272
Query: 254 VIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP-EYKLFGTIVHSGFSPDSGH 312
V+ LKRF + G K K + + L +S C + QD P Y+L+ +VH G++ +GH
Sbjct: 273 VLVLKRFSDLSGDKNAKQVRYPASLDVSR--CLSRQDGGPAAYRLYAVLVHVGWTCHTGH 330
Query: 313 YYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKSH 372
Y +Y+K G+WY +D+ VS + VLS++ Y LF+I ++ V +G A G
Sbjct: 331 YLSYVKAGNGKWYRMDDAEVSACDVTCVLSQQAYALFYIHQSEL-VRGSGGVARGGASGG 389
Query: 373 ENGKEAYKGVKGTVP 387
+ A +G + VP
Sbjct: 390 HGMEAADEGPRPGVP 404
>gi|344297595|ref|XP_003420482.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Loxodonta
africana]
gi|344297601|ref|XP_003420485.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Loxodonta
africana]
Length = 529
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/375 (32%), Positives = 195/375 (52%), Gaps = 34/375 (9%)
Query: 14 SLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSAL 73
+L S + G GLRN+G++CY+N+ LQCLTYTPPLA++ L +H++ C Q
Sbjct: 63 TLASTWSRSSGVGAGLRNMGDTCYVNAALQCLTYTPPLADYMLSREHAASCGQ------- 115
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
+ C C ++ I R+LS P + A +QEDAHEFL +
Sbjct: 116 ----QGYCVLCAMQDHITRALS------HPGDVMEPSHALARGLHRHQQEDAHEFLMSTL 165
Query: 134 DACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNK 193
DA CLR + R ++ +++++ IFGG +S+++C C S+
Sbjct: 166 DAVQKACLRSHRHLRG-------------LSEDTTLIRRIFGGYWRSRIQCCHCQGVSDT 212
Query: 194 VDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
D +DI+LDI + S+ +A+++ E LDG N Y+C C++ + A K +++ P L
Sbjct: 213 FDPYLDITLDIQAAQSVNQALEQLVTAEELDGENSYQCRICQRKMPASKTLTLHTCPEAL 272
Query: 254 VIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP-EYKLFGTIVHSGFSPDSGH 312
V+ LKRF + G K K + + L +S C + QD P Y+L+ +VH G++ +GH
Sbjct: 273 VLVLKRFSDLSGDKNAKQVRYPASLDVSR--CLSRQDGGPAAYRLYAVLVHVGWTCHTGH 330
Query: 313 YYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKSH 372
Y +Y+K G+WY +D+ VS + VLS++ Y LF+I ++ V +G A G
Sbjct: 331 YLSYVKAGNGKWYRMDDAEVSACDVTCVLSQQAYALFYIHQSEL-VRGSGGVARGGASGG 389
Query: 373 ENGKEAYKGVKGTVP 387
+ A +G + VP
Sbjct: 390 HGMEAADEGPRPGVP 404
>gi|449490903|ref|XP_004158744.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 23-like [Cucumis sativus]
Length = 898
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/327 (38%), Positives = 186/327 (56%), Gaps = 26/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+LNSVLQCLTYT PLA + +H + C + G C C ++
Sbjct: 102 GLQNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHQNSC-HVAG----------FCALCAIQ 150
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
K + R+L + AP + S LR + +F+ RQEDAHE++ ++++ H CL L
Sbjct: 151 KHVSRALQSSGRILAPKDLVSNLRCISRNFRNARQEDAHEYMVNLLESMHKCCLPL---- 206
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G S E S+V +IFGG L+SQVKC+ C SNK D +D+SLDI+ +
Sbjct: 207 ---GLPSESPSAYE-----KSLVHKIFGGRLRSQVKCMQCSXCSNKFDPFLDLSLDIVKA 258
Query: 208 CSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI-FG 265
S+ +A + F PE+LDG + Y+C CK+ V A KQ ++ ++P +L I LKRF+
Sbjct: 259 DSIYKAFKNFTTPELLDGGXRQYQCQQCKQKVKALKQFTVHKAPYVLTIHLKRFQSYNLE 318
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KI K I F L L+ F+ S D +Y L+G +VH G S SGHYY Y++ + WY
Sbjct: 319 EKIHKKIHFGPTLDLAPFV-SGSYDGDLKYTLYGVLVHHGGSTRSGHYYCYVRTSSAMWY 377
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ VS + V ++ Y+LF++R
Sbjct: 378 ALDDNRVSHVGDRTVYEQQAYMLFYVR 404
>gi|326510035|dbj|BAJ87234.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 979
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 131/342 (38%), Positives = 187/342 (54%), Gaps = 32/342 (9%)
Query: 22 RGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKREC 81
RG P GL N GNSCY N+VLQCL T PL L HS C K C
Sbjct: 438 RGISPRGLFNCGNSCYANAVLQCLMCTKPLMIHLLLRLHSKDCCS-----------KNWC 486
Query: 82 PFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL 141
C LE+ +L +P++I S LR G QEDAHEFLR+++ + CL
Sbjct: 487 LMCELEQ-YASTLRESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQAACL 545
Query: 142 RLKKLRRKGGGSSGGGGGGETINGG---SSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
G GG + + +++++++FGG L+S+VKCL C ES + + IM
Sbjct: 546 -------------DGLGGEKQVEQSLQETTLIQQMFGGRLKSKVKCLRCHHESERYENIM 592
Query: 199 DISLDILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQL 257
D++L+I SL++A+ +F PE LDG+N YKC C V ARKQ+S+ + PNIL + L
Sbjct: 593 DLTLEIHGWVESLQDALTQFTAPEDLDGDNMYKCGRCCAYVKARKQLSVHEVPNILTVVL 652
Query: 258 KRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH--SGFSPDSGHYYA 315
KRF+ GKI+K + F ++L + F+ A P P Y L+ +VH + + SGHY +
Sbjct: 653 KRFQTGKYGKINKCVTFPDMLDMVPFVTGAGDHP-PLYFLYAVVVHVDTENASFSGHYIS 711
Query: 316 YIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
Y+KD G W +DS V +L +V+SE Y+LF++R+ RP
Sbjct: 712 YVKDMQGTWLRIDDSEVKAVSLNQVMSEGAYMLFYLRSFPRP 753
>gi|353234548|emb|CCA66572.1| related to ubiquitin carboxyl-terminal hydrolase 36 [Piriformospora
indica DSM 11827]
Length = 701
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 131/345 (37%), Positives = 188/345 (54%), Gaps = 39/345 (11%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGNSC++NS LQ L +T PL N L +H S CK ALD C C L
Sbjct: 136 GLHNLGNSCFMNSTLQILLHTAPLLNVLLSHRHDS-CKL-----ALDGSY---CFTCQL- 185
Query: 88 KRIVRSLSVDL------TLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL 141
R L++D+ +P I L+ + + RQEDAHEFLR+ IDA L
Sbjct: 186 ----RKLALDILCRKSRQARSPEDIFRNLKRISPTLRQYRQEDAHEFLRFSIDA-----L 236
Query: 142 RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDIS 201
+L +G E + +S V +FGG +S+V C +CG S+ D ++D+S
Sbjct: 237 QL-------SAQNGVKSVPEKL-AATSWVYRLFGGQFRSRVTCGSCGHNSDTFDTLLDLS 288
Query: 202 LDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE 261
+DI +LK+A++ F E L+G+NKYKC+ CKK V+A+KQ+++ ++P L IQLKRF
Sbjct: 289 VDIAKCDTLKQALRMFSAIERLEGSNKYKCEKCKKPVNAKKQITVHKAPMALCIQLKRFS 348
Query: 262 GIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI 321
+G KI I + E L L+ + P Y+L+G IVH+G P+SGHYY ++K+
Sbjct: 349 P-WGRKITNMIDYPETLSLNEILSDNQTSPM--YQLYGVIVHAGSGPNSGHYYTFVKNYA 405
Query: 322 GRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFAS 366
G+W ND V + S+ Y+LF++R RP + N AS
Sbjct: 406 GKWLRINDDEVDTIPRAPLGSKNAYMLFYMR---RPFNINDVVAS 447
>gi|344297599|ref|XP_003420484.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Loxodonta
africana]
Length = 529
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 121/375 (32%), Positives = 195/375 (52%), Gaps = 34/375 (9%)
Query: 14 SLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSAL 73
+L S + G GLRN+G++CY+N+ LQCLTYTPPLA++ L +H++ C Q
Sbjct: 63 TLASTWSRSSGVGAGLRNMGDTCYVNAALQCLTYTPPLADYMLSREHAASCGQ------- 115
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
+ C C ++ I R+LS P + A +QEDAHEFL +
Sbjct: 116 ----QGYCVLCAMQDHITRALS------HPGDVMEPSHALARGLHRHQQEDAHEFLMSTL 165
Query: 134 DACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNK 193
DA CLR + R ++ +++++ IFGG +S+++C C S+
Sbjct: 166 DAVQKACLRSHRHLRG-------------LSEDTTLIRRIFGGYWRSRIQCCHCQGVSDT 212
Query: 194 VDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
D +DI+LDI + S+ +A+++ E LDG N Y+C C++ + A K +++ P L
Sbjct: 213 FDPYLDITLDIQAAQSVNQALEQLVTVEELDGENSYQCRICQRKMPASKTLTLHTCPEAL 272
Query: 254 VIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP-EYKLFGTIVHSGFSPDSGH 312
V+ LKRF + G K K + + L +S C + QD P Y+L+ +VH G++ +GH
Sbjct: 273 VLVLKRFSDLSGDKNAKQVRYPASLDVSR--CLSRQDGGPAAYRLYAVLVHVGWTCHTGH 330
Query: 313 YYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKSH 372
Y +Y+K G+WY +D+ VS + VLS++ Y LF+I ++ V +G A G
Sbjct: 331 YLSYVKAGNGKWYRMDDAEVSACDVTCVLSQQAYALFYIHQSEL-VRGSGGVARGGASGG 389
Query: 373 ENGKEAYKGVKGTVP 387
+ A +G + VP
Sbjct: 390 HGMEAADEGPRPGVP 404
>gi|357140850|ref|XP_003571975.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like
[Brachypodium distachyon]
Length = 971
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 131/342 (38%), Positives = 186/342 (54%), Gaps = 33/342 (9%)
Query: 22 RGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKREC 81
RG P GL N GNSCY N+VLQCL T PL + L HS C K C
Sbjct: 431 RGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCS------------KNGC 478
Query: 82 PFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL 141
C LE+ +L +P++I S LR G QEDAHEFLR+++ + CL
Sbjct: 479 LMCELEQ-YASTLRESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQAACL 537
Query: 142 RLKKLRRKGGGSSGGGGGGETINGG---SSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
G GG + + +++++++FGG L+S+VKCL C ES + + IM
Sbjct: 538 -------------DGLGGEKHVEPSLQETTLIQQMFGGRLKSKVKCLRCLHESERYENIM 584
Query: 199 DISLDILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQL 257
D++L+I SL++A+ +F PE LDG N YKC C V ARKQ+S+ + PNIL + L
Sbjct: 585 DLTLEIHGWVESLQDALTQFTAPEDLDGENMYKCGRCCAYVKARKQLSVHEVPNILTVVL 644
Query: 258 KRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH--SGFSPDSGHYYA 315
KRF+ GKI+K + F E+L + F+ A P P Y L+ +VH + + SGHY +
Sbjct: 645 KRFQTGKYGKINKCVTFPEMLDMVPFVTGAGDHP-PLYFLYAVVVHVDTENASFSGHYIS 703
Query: 316 YIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
Y+KD G W +DS V + +V+SE Y+LF++R+ RP
Sbjct: 704 YVKDMQGTWLRIDDSEVKAVSPNQVMSEGAYMLFYLRSFPRP 745
>gi|224142061|ref|XP_002324377.1| predicted protein [Populus trichocarpa]
gi|222865811|gb|EEF02942.1| predicted protein [Populus trichocarpa]
Length = 489
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 127/331 (38%), Positives = 176/331 (53%), Gaps = 26/331 (7%)
Query: 25 PPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFC 84
PP GL N GNSC+ N VLQCLTYT PL + L+ H + CK C C
Sbjct: 179 PPCGLLNCGNSCFANVVLQCLTYTRPLVAYLLEKGHQTECKH-----------NDWCFLC 227
Query: 85 ILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLK 144
+ + R+ L +P I S LR + GRQEDAHEF+R+ ID + CL
Sbjct: 228 EFQSHVERASQSALPF-SPMNILSRLRNIGGNLGYGRQEDAHEFMRFAIDTMQSVCL--- 283
Query: 145 KLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI 204
GG E + +++++ IFGG LQSQV C C SN+ + +MD++++I
Sbjct: 284 -------DEFGGEKAVEPASQETTIIQHIFGGRLQSQVICTKCNKISNQFENMMDLTVEI 336
Query: 205 L-NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI 263
++ SL+E + +F E L G N YKCD C V A K+++I ++PN+L I LKRF+
Sbjct: 337 HGDAESLEECLNQFTDKEWLHGENMYKCDGCNDYVKAWKRLTIQRAPNVLTIALKRFQSG 396
Query: 264 FGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYIKDAI 321
GK++K + F E L LS +M + D YKL+ +VH S GHY Y KD
Sbjct: 397 RFGKLNKRVTFPETLDLSPYMSEKG-DGADVYKLYAVVVHVDMLNASFFGHYICYTKDFH 455
Query: 322 GRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
G W+ +DS VS L EVLS+ Y+L + R
Sbjct: 456 GNWHRIDDSKVSSVELDEVLSQGAYMLLYSR 486
>gi|224116680|ref|XP_002317364.1| predicted protein [Populus trichocarpa]
gi|222860429|gb|EEE97976.1| predicted protein [Populus trichocarpa]
Length = 777
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 138/380 (36%), Positives = 200/380 (52%), Gaps = 28/380 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N+VLQCLT T PL F L HS C ++ C C
Sbjct: 380 PRGLVNCGNSCYANAVLQCLTCTKPLIVFLLHRSHSRACCEIDW-----------CLMCE 428
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
LE+ ++ L +P++I +R G QEDAHEFLR +I + + CL +K
Sbjct: 429 LEQHVMMLRECGGPL-SPSRILLHMRNINHQIGDGSQEDAHEFLRLLIASMQSICL--EK 485
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
L GG + ++ ++ FGG L+S+VKCL C ES + + IMD++L+I
Sbjct: 486 L--------GGEDKVDPRLQETTFIQHTFGGRLRSKVKCLRCHHESERYENIMDLTLEIF 537
Query: 206 NSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
SL++A+ +F PE LDG N Y+C C V ARKQ+SI ++PNIL I LKRF+
Sbjct: 538 GWVKSLEDALTQFTTPEELDGENMYRCGRCAAYVRARKQLSIHEAPNILTIVLKRFQEGK 597
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH--SGFSPDSGHYYAYIKDAIG 322
GKI+K I F ++L + FM + D P Y L+ +VH + + SGHY AY+KD G
Sbjct: 598 YGKINKCITFPDMLDMIPFM-TGTGDVPPLYMLYAVVVHLDTLNASFSGHYVAYVKDLQG 656
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNG--VKSHENGKEAYK 380
W+ +D+ V ++ +V+ E YILF+ P ++ NG + S+ NG
Sbjct: 657 SWFRIDDTEVHPVSMSQVMLEGAYILFYTSHFVGPEASLDVKPENGSSLASYANGIPRSS 716
Query: 381 GVKGTVPLKAVATKPSAEQS 400
K T + + S+++S
Sbjct: 717 ANKNTTQVMDFSDATSSDRS 736
>gi|344239651|gb|EGV95754.1| Ubiquitin carboxyl-terminal hydrolase 42 [Cricetulus griseus]
Length = 838
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 152/246 (61%), Gaps = 16/246 (6%)
Query: 110 LRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKLRRKGGGSSGGGGGGETINGGSS 168
+R A HF+ G QEDAHEFL+Y +DA CL KL R ++
Sbjct: 7 MRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRH--------------TQATT 52
Query: 169 VVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNK 228
+V +IFGG L+S+VKCL C S+ D +DI+L+I + S+ +A+++F +PE LDG N
Sbjct: 53 LVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQLDGENS 112
Query: 229 YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKAS 288
YKC CKK+V A K+ +I +S N+L I LKRF GGKI K + + E L + +M + +
Sbjct: 113 YKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPN 172
Query: 289 QDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
+P Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VL+++ Y+L
Sbjct: 173 GEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLNQQAYVL 231
Query: 349 FFIRAN 354
F+IR++
Sbjct: 232 FYIRSH 237
>gi|325190752|emb|CCA25244.1| ubiquitinspecific protease putative [Albugo laibachii Nc14]
Length = 699
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 193/379 (50%), Gaps = 52/379 (13%)
Query: 9 MSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLT 68
M W+ + ++ GP G NLGN+CYLNSVLQCL YTP L + L+ +++
Sbjct: 90 MEWRNA------RKIGP--GFSNLGNTCYLNSVLQCLCYTPCLVQYLLQNRNTI------ 135
Query: 69 GDSALDAERKRECPFCILEKRIVRSLSVDLTLDA-------------------PAKIQSC 109
+++K+ FC L+ + V L + + P
Sbjct: 136 ------SKKKQVNSFCALQSIVNLFARVHLEVKSVQSQNAFHNKSLQHAKVMQPRDFVMN 189
Query: 110 LRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSV 169
+R+ ++HF+ GRQEDAHEF R ++D+ + L+ + +++
Sbjct: 190 VRLLSKHFRIGRQEDAHEFFRSLLDSIQKSSLQAARF-----------ASDSDPLASTTM 238
Query: 170 VKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSC-SLKEAMQKFFQPEVLDGNNK 228
+ IFGG L+S +KC+ C S +++ D+SL+I N ++ EA+ F E LD N
Sbjct: 239 IPRIFGGKLKSSLKCVKCSYVSEHLEDFQDLSLEIHNGIQTITEAIDHFTAVEKLDETNA 298
Query: 229 YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKAS 288
+KC C+ A K ++I + PN+LVIQLKRF+G GGK+ K I+F L L + CK+
Sbjct: 299 WKCTKCRLFNRAEKGLTIAEYPNVLVIQLKRFDGFLGGKLKKHISFPLELALPN-TCKSK 357
Query: 289 QDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
+ +Y L+ +VH+G S D GHYYA++K + +WY ND V + VLS++ Y+L
Sbjct: 358 SQNRTKYTLYAILVHAGHSTDCGHYYAFVKGSSRQWYEMNDDSVRWVSADTVLSQRAYML 417
Query: 349 FFIRANQRPVSANGTFASN 367
F+ R + T SN
Sbjct: 418 FYSRVIDKDTKPATTSISN 436
>gi|403280795|ref|XP_003931895.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Saimiri
boliviensis boliviensis]
Length = 1119
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 180/345 (52%), Gaps = 34/345 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
IV++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 172 NHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKL 231
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +DI+L+I
Sbjct: 232 DRQ--------------TQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDIALEIRQ 277
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F + +VL G N Y C ++S + S+L +
Sbjct: 278 AANIVRALELFVKADVLSGENAYMCAKIMAVLS--RVSSVL---SWCAQPTAAMPAAITA 332
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
K D + + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 333 KND--VGYPEFLNIRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 389
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
NDS V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 390 MNDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGPISKTGSSS 434
>gi|440803342|gb|ELR24249.1| Ubiquitin carboxylterminal hydrolase [Acanthamoeba castellanii str.
Neff]
Length = 916
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 125/356 (35%), Positives = 176/356 (49%), Gaps = 81/356 (22%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N+GN+C+LNS LQCLTY PPLAN+ QHS C+++ C C++E
Sbjct: 13 GLHNVGNTCFLNSTLQCLTYCPPLANYFQSRQHSKACRKVGF-----------CAMCVME 61
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ +V +L P +I S LR +HF+ GRQEDA EFL Y++ H + L
Sbjct: 62 RHVVAALKATSGAIVPKEIVSQLRAIVKHFRLGRQEDAQEFLCYLLSGMHKSSLPQ---- 117
Query: 148 RKGGGSSGGGGGGETING---GSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI 204
GE + +SVV IFGG LQS ++C A M +
Sbjct: 118 ------------GEKLEARIEQTSVVHRIFGGHLQSSLECTA-----------MRL---- 150
Query: 205 LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF--EG 262
C K A+KQ+SI ++PN+L IQLKRF
Sbjct: 151 -----------------------------CAKRSRAKKQLSIHEAPNVLAIQLKRFSYRS 181
Query: 263 IFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIG 322
+FGGKI K I++ L L FM K D P Y L+G +VHSG+ +GHYY YIK++ G
Sbjct: 182 MFGGKISKFISYPAKLSLKPFMSKNQYDSNPCYDLYGVLVHSGYDTRAGHYYCYIKNSNG 241
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKSHENGKEA 378
W+ NDS + ++V+ ++ Y+LF++R+ P S NG +S E+ +EA
Sbjct: 242 IWHEMNDSTRRQVSQEQVMKQQAYLLFYVRS---PASLPAQL--NGNESSESDQEA 292
>gi|255083302|ref|XP_002504637.1| predicted protein [Micromonas sp. RCC299]
gi|226519905|gb|ACO65895.1| predicted protein [Micromonas sp. RCC299]
Length = 368
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 124/358 (34%), Positives = 186/358 (51%), Gaps = 49/358 (13%)
Query: 25 PPLG--LRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECP 82
PP+G LRNLGNSC+LNS+LQ LT+T PLA CL +H++ C AL R+ C
Sbjct: 27 PPVGRGLRNLGNSCFLNSILQALTHTAPLAKLCLARRHTANC-------ALTNARE-PCA 78
Query: 83 FCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR 142
FCI+E+ + AP ++ LR+ A HF GRQEDAHE LR ++A ++CL
Sbjct: 79 FCIIERHAI----------APEEVFGNLRLLARHFVRGRQEDAHELLRLSLEAMDDSCLA 128
Query: 143 L--KKLRRKGGGSSGGGGGGETINGGS----SVVKEIFGGALQSQVKCLACGAESNKVDE 196
+ R+GG + G + V+ IF G ++ V+C CG ES D
Sbjct: 129 NCGRPSARRGGHRGQSSVVFDPETGARLAPPTAVERIFQGKFRNLVRCARCGHESKTYDP 188
Query: 197 IMDISLDILN----------------------SCSLKEAMQKFFQPEVLDGNNKYKCDNC 234
+D+SL++ S++ A++ F + E L+G N Y+C+ C
Sbjct: 189 FLDVSLELPGREDRSSHGGGYGPGYLRGSGSARGSVESALKNFTEEERLEGENAYRCERC 248
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPE 294
K L A K+++I ++P ILV+ LKRF+ +GGKI+ + F E L L M + +++ P
Sbjct: 249 KDLCPATKRLTIHEAPAILVVHLKRFDH-YGGKINSPVDFTERLTLGGHMSEDAEEAGPA 307
Query: 295 YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
Y+L+ + HSG + Y A + WY C+DS V +V E+ Y+LF+ R
Sbjct: 308 YRLYAMVTHSGNDAIASFYGAATNASDDEWYLCDDSSVRRVNRADVFDEQAYVLFYER 365
>gi|302774793|ref|XP_002970813.1| hypothetical protein SELMODRAFT_171601 [Selaginella moellendorffii]
gi|300161524|gb|EFJ28139.1| hypothetical protein SELMODRAFT_171601 [Selaginella moellendorffii]
Length = 419
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/330 (37%), Positives = 177/330 (53%), Gaps = 26/330 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N VLQCL T PLA + L H C +R+ C C
Sbjct: 113 PCGLINCGNSCYANVVLQCLASTRPLAAYLLHGMHQEAC-----------QREGWCFMCE 161
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
LE + ++ + + +P KI S LR GRQEDAHEF+R +D CL
Sbjct: 162 LEDHVQKAFNNQMPF-SPIKILSRLRSIGNSLGYGRQEDAHEFMRLAVDCMQKICL---- 216
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
+GG + +++++ IFGG LQSQV C C SN + ++D+S+ I
Sbjct: 217 ------DEAGGETTLDARTQETTLIQHIFGGYLQSQVVCCQCQQRSNLYENMLDLSVGIQ 270
Query: 206 -NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
N SL++A+++F PE LDG+NKY+CD C V A+K++S+ ++PNIL I LKRF+G
Sbjct: 271 GNVESLEDALKQFTSPEWLDGDNKYRCDRCNAYVRAKKRLSVHEAPNILTIALKRFQGGK 330
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYIKDAIG 322
GKI+K + F E L + +M + D P YKL+ +VH S GHY Y++ G
Sbjct: 331 FGKINKKVTFPEELDMVPYM-SGTVDTPPAYKLYAVVVHVDMLNASYFGHYVCYVRAGNG 389
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
W+ +DS V V+S+K Y+L + R
Sbjct: 390 AWFKVDDSKVKEVDQIRVMSQKAYMLLYRR 419
>gi|379030635|ref|NP_001243802.1| putative ubiquitin carboxyl-terminal hydrolase 17-like protein 1
[Homo sapiens]
gi|74723224|sp|Q7RTZ2.1|U17L1_HUMAN RecName: Full=Putative ubiquitin carboxyl-terminal hydrolase
17-like protein 1; AltName: Full=Deubiquitinating enzyme
17-like protein 1; AltName: Full=Ubiquitin thioesterase
17-like protein 1; AltName:
Full=Ubiquitin-specific-processing protease 17-like
protein 1
gi|33186790|tpe|CAD66056.1| TPA: ubiquitin-specific protease 17-like protein [Homo sapiens]
Length = 530
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 180/328 (54%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY N+ LQCLTYT PLAN+ L +HS C +R + C C ++
Sbjct: 81 GLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTC-----------QRPKCCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I +L +P + + A F G+QED HEFL + +DA CL
Sbjct: 130 AHITWALH------SPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHCKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+K+A+++ +PE L+G N Y C C + A +++ S +L++ LKRF + G K
Sbjct: 231 QSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + +M + + P Y L+ +VH+G+S GHY++Y+K +WY
Sbjct: 291 LAKNVQYPECLDMQPYMSQQNTGPLV-YVLYAVLVHAGWSCHDGHYFSYVKAQEVQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+V ++ VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTVCSIISVLSQQAYVLFYIQKSE 377
>gi|291408075|ref|XP_002720394.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 503
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 174/331 (52%), Gaps = 37/331 (11%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L HS C+ S C C +E
Sbjct: 57 GLQNMGNTCYMNATLQCLTYTPPLANYMLSQAHSQTCR----PSGF-------CMLCAVE 105
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ L +P + + A F RQEDAHEFL + +DA
Sbjct: 106 THFL------WALHSPGDVIQPCQALAAAFHRNRQEDAHEFLVFTVDAL----------- 148
Query: 148 RKGGGSSGGGGGGETING---GSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI 204
+ G G + G S+ +IFGG +SQ+KCL C S+ +D +DI+LDI
Sbjct: 149 -----KAAGLPGLMNVVGPKEDKSLSHQIFGGYWKSQIKCLQCQGVSDTLDPYLDIALDI 203
Query: 205 LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
+ S+++A+++ +PE LDG N Y+C C K +A K + + S N+L+ LKRF
Sbjct: 204 KTADSVQQALEQLVKPEELDGENAYECGICLKKTAASKTLVLQSSGNVLIFVLKRFSDFT 263
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRW 324
G KI + + + E L + +M + S P EY L+ +VH G GHY+ Y+K G W
Sbjct: 264 GEKIARQVQYPECLDMRPYMSQQSGRPL-EYVLYAALVHVGLRCQKGHYFCYVKAGNGHW 322
Query: 325 YCCNDSYVSVSTLQEVLSEKVYILFFIRANQ 355
Y +D+ V+ + VL++ Y+LF+++ ++
Sbjct: 323 YKMDDAKVTACDITSVLNQSAYVLFYVQKSE 353
>gi|344297597|ref|XP_003420483.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Loxodonta africana]
Length = 529
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/375 (32%), Positives = 194/375 (51%), Gaps = 34/375 (9%)
Query: 14 SLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSAL 73
+L S + G GLRN+G++CY N+ LQCLTYTPPLA++ L +H++ C Q
Sbjct: 63 TLASTWSRSSGVGAGLRNMGDTCYGNAALQCLTYTPPLADYMLSREHAASCGQ------- 115
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
+ C C ++ I R+LS P + A +QEDAHEFL +
Sbjct: 116 ----QGYCVLCAMQDHITRALS------HPGDVMEPSHALARGLHRHQQEDAHEFLMSAL 165
Query: 134 DACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNK 193
DA CLR + R ++ +++++ IFGG +S+++C C S+
Sbjct: 166 DAVQKACLRSHRHLRG-------------LSEDTTLIRRIFGGYWRSRIQCCHCQGVSDT 212
Query: 194 VDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
D +DI+LDI + S+ +A+++ E LDG N Y+C C++ + A K +++ P L
Sbjct: 213 FDPYLDITLDIQAAQSVNQALEQLVTAEELDGENSYQCRICQRKMPASKTLTLHTCPEAL 272
Query: 254 VIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP-EYKLFGTIVHSGFSPDSGH 312
V+ LKRF + G K K + + L +S C + QD P Y+L+ +VH G++ +GH
Sbjct: 273 VLVLKRFSDLSGDKNAKQVRYPASLDVSR--CLSRQDGGPAAYRLYAVLVHVGWTCHTGH 330
Query: 313 YYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKSH 372
Y +Y+K G+WY +D+ VS + VLS++ Y LF+I ++ V +G A G
Sbjct: 331 YLSYVKAGNGKWYRMDDAEVSACDVTCVLSQQAYALFYIHQSEL-VRGSGGVARGGASGG 389
Query: 373 ENGKEAYKGVKGTVP 387
+ A +G + VP
Sbjct: 390 HGMEAADEGPRPGVP 404
>gi|356554161|ref|XP_003545417.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 729
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 147/444 (33%), Positives = 215/444 (48%), Gaps = 39/444 (8%)
Query: 21 KRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
K G PP GL N GNSC+ N VLQCL++T PL + L+ H C
Sbjct: 177 KPGFPPCGLLNCGNSCFANVVLQCLSFTKPLVAYLLEKGHRRECSC-----------NDW 225
Query: 81 CPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
C C E + R+ +P I S L GRQEDAHEF+R+ ID + C
Sbjct: 226 CFLCEFENHVERTRLSSQAF-SPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQSVC 284
Query: 141 LRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDI 200
L GG + ET ++++ IFGG LQS+V C C SN+ + +MD+
Sbjct: 285 LD-----EFGGEKAVPPNLQET-----TLIQHIFGGRLQSEVICTKCNKISNQYENMMDL 334
Query: 201 SLDIL-NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
+++I ++ SL+E + +F E LDG N YKC+ CK V A K++++ +PNIL I LKR
Sbjct: 335 TVEIHGDAASLEECLDQFTARERLDGENMYKCEGCKDYVKAWKRLTVKCAPNILTIALKR 394
Query: 260 FEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYI 317
F+ GK++K I+F E L LS +M +A D YKL+G +VH S GHY YI
Sbjct: 395 FQSGRFGKLNKRISFPETLNLSPYMSEAG-DGSDIYKLYGVVVHIDMLNASFFGHYICYI 453
Query: 318 KDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKSHENGKE 377
KD G WY +D V ++EVLS+ Y+L + R + RP +G++ +
Sbjct: 454 KDFQGNWYRIDDWKVMTVEVEEVLSQGAYMLLYSRCSARP---------SGLQIQTSESS 504
Query: 378 AYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKVEKVPSNPRLKFSISGSSGCKGVP--- 434
V+ V ++ T+ S+ K + E +PS+ + +S S C+
Sbjct: 505 GIAEVQTEVEVEPGQTEQDECLSNMKALTCSRGSEVLPSDVSPELKVSSSYDCESFAGLN 564
Query: 435 -PTSNGKVNVHKSQSVKMNGVVKD 457
P + N V G+V +
Sbjct: 565 SPVKREQFNDVDMMDVDSTGIVNE 588
>gi|34324152|gb|AAN10252.1| deubiquitinating enzyme [Mus musculus]
Length = 526
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/339 (33%), Positives = 182/339 (53%), Gaps = 30/339 (8%)
Query: 24 GPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPF 83
GP GL+N GNSCYLN+ LQCLT+TPPLA++ L +HS C G C
Sbjct: 48 GPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEG-----------CKM 96
Query: 84 CILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
C +E + +SL + D + I F +QEDAHEFL + ++ H +CL++
Sbjct: 97 CAMEAHVTQSLLHSHSGD----VMKPSHILTSAFHKHQQEDAHEFLMFTLETMHESCLQV 152
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
+ + + S + +IFGG +SQ+KCL C S+ D +DI LD
Sbjct: 153 HRQSKP-------------TSEDSLPIHDIFGGWWRSQIKCLLCQGTSDTYDRFLDIPLD 199
Query: 204 ILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI 263
I ++ S+K+A+ + E L G+N Y C C++ + A K + + +P +L++ L RF
Sbjct: 200 ISSAQSVKQALWDTEKSEELCGDNAYYCGKCRQKMPASKTLHVHIAPKVLMVVLNRFSAF 259
Query: 264 FGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR 323
G K+D+ +++ E L L ++ + + P P Y L+ +VH G + SGHY+ +K G+
Sbjct: 260 TGNKLDRKVSYPEFLDLKPYLSEPTGGPLP-YTLYAVLVHDGATSHSGHYFCCVKAGHGK 318
Query: 324 WYCCNDSYVSVSTLQEVLSEKVYILFFI-RANQRPVSAN 361
WY +D+ V+ + VL+E Y+L ++ +AN + VS +
Sbjct: 319 WYKMDDTKVTRCDVTSVLNENAYVLSYVQQANLKQVSID 357
>gi|449447371|ref|XP_004141442.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Cucumis
sativus]
Length = 711
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/342 (38%), Positives = 186/342 (54%), Gaps = 26/342 (7%)
Query: 21 KRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
K+ P GL N GNSC+ N VLQCL++T PL F L+ H + C R
Sbjct: 182 KKDFHPCGLLNCGNSCFANVVLQCLSFTRPLFAFLLEKGHRNECV-----------RDDW 230
Query: 81 CPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
C FC + + R+ S + +P I L + GRQEDAHEF+R+ ID
Sbjct: 231 CFFCEFQTHVERA-SQNAQPFSPNNIILRLPNIGGNLGYGRQEDAHEFMRFAIDR----- 284
Query: 141 LRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDI 200
++L L GG + ET ++++ IFGG LQSQV C C SN+ + +MD+
Sbjct: 285 MQLACLDEFGGEKAVCAHSRET-----TIIQHIFGGQLQSQVICTNCNNVSNQHENMMDL 339
Query: 201 SLDIL-NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
+++I ++ SL+E + +F + E L G+NKYKCD C V A K+++I Q+PNIL I LKR
Sbjct: 340 TVEIHGDAASLEECLDQFTKIEWLHGDNKYKCDGCNDYVKASKRLTIKQAPNILTIALKR 399
Query: 260 FEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYI 317
F+ GK++K +AF E L LS +M +A D + Y+L+ +VH S GHY YI
Sbjct: 400 FQSGRFGKLNKKVAFPETLDLSPYMSEAG-DRKDVYRLYAVVVHVDMLNASFFGHYICYI 458
Query: 318 KDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVS 359
KD G WY +D V L+EVLS+ Y++ + R R S
Sbjct: 459 KDFSGNWYRIDDCKVFKVDLEEVLSQGAYMILYSRVRPRSSS 500
>gi|359324297|ref|XP_003640330.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 645
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 181/325 (55%), Gaps = 30/325 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYT PLA++ L QH + C+ R+ C C L+
Sbjct: 191 GLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCR-----------RQTSCMLCTLQ 239
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
++R L P ++ L + F +QEDAHE+L +++DA CL KL
Sbjct: 240 THLMRVLC------HPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKL- 292
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S++++++FGG +SQ++CL C S+ ++ +DISLDI ++
Sbjct: 293 -----------SDPECPQDSTLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGDA 341
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++ +PE+L+G N Y C C + V A K +++ SP +L++ L+RF + G K
Sbjct: 342 HSVSQALEQLVKPELLEGENAYHCSKCLEKVPASKVLTLHTSPKVLILVLRRFSDLTGNK 401
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + ++ + P Y L+ +VH+G S SGHY+ ++K G+WY
Sbjct: 402 MTKEVQYPERLDMQHYLSEQRAGPL-VYVLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKM 460
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ VS + L + Y+LF+++
Sbjct: 461 DDAKVSACDVTCALRQPAYVLFYMQ 485
>gi|358421676|ref|XP_003585072.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Bos
taurus]
Length = 326
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 163/272 (59%), Gaps = 14/272 (5%)
Query: 83 FCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR 142
C ++ I ++LS + P + + +R A HF+ G QEDAHEFL+Y +DA CL
Sbjct: 2 MCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL- 60
Query: 143 LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISL 202
G + +++V +IFGG L+S+VKCL C S+ D +DI+L
Sbjct: 61 ------------NGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITL 108
Query: 203 DILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEG 262
+I + S+ +A+++F +PE LDG N YKC CKK+V A K+ +I +S N+L + LKRF
Sbjct: 109 EIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFAN 168
Query: 263 IFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIG 322
GGKI K + + E L + +M + + +P Y L+ +VH+GF+ +GHY+ YIK + G
Sbjct: 169 FTGGKIAKDVKYPEYLDIRPYMSQPNGEP-IIYVLYAVLVHTGFNCHAGHYFCYIKASNG 227
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRAN 354
WY NDS VS S ++ VLS++ Y+LF+IR++
Sbjct: 228 LWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSH 259
>gi|449486818|ref|XP_004157412.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Cucumis
sativus]
Length = 711
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/342 (38%), Positives = 186/342 (54%), Gaps = 26/342 (7%)
Query: 21 KRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
K+ P GL N GNSC+ N VLQCL++T PL F L+ H + C R
Sbjct: 182 KKDFHPCGLLNCGNSCFANVVLQCLSFTRPLFAFLLEKGHRNECV-----------RDDW 230
Query: 81 CPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
C FC + + R+ S + +P I L + GRQEDAHEF+R+ ID
Sbjct: 231 CFFCEFQTHVERA-SQNAQPFSPNNIILRLPNIGGNLGYGRQEDAHEFMRFAIDR----- 284
Query: 141 LRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDI 200
++L L GG + ET ++++ IFGG LQSQV C C SN+ + +MD+
Sbjct: 285 MQLACLDEFGGEKAVCAHSRET-----TIIQHIFGGQLQSQVICTNCNNVSNQHENMMDL 339
Query: 201 SLDIL-NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
+++I ++ SL+E + +F + E L G+NKYKCD C V A K+++I Q+PNIL I LKR
Sbjct: 340 TVEIHGDAASLEECLDQFTKIEWLHGDNKYKCDGCNDYVKASKRLTIKQAPNILTIALKR 399
Query: 260 FEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYI 317
F+ GK++K +AF E L LS +M +A D + Y+L+ +VH S GHY YI
Sbjct: 400 FQSGRFGKLNKKVAFPETLDLSPYMSEAG-DRKDVYRLYAVVVHVDMLNASFFGHYICYI 458
Query: 318 KDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVS 359
KD G WY +D V L+EVLS+ Y++ + R R S
Sbjct: 459 KDFSGNWYRIDDCKVFKVDLEEVLSQGAYMILYSRVRPRSSS 500
>gi|301789131|ref|XP_002929987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Ailuropoda melanoleuca]
Length = 531
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 174/328 (53%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CY+N+VLQCLTYTPPLA+ L QH C + T C C L+
Sbjct: 81 GLQNLGNTCYVNAVLQCLTYTPPLASSMLSQQHQQTCGKQTF-----------CMLCALQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R+L P + L F +QEDAHEFL + + A CL K
Sbjct: 130 AHMTRALC------HPGDVIRPLPRLLAAFHTHQQEDAHEFLMFTLGAMQQACLPEDK-- 181
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+ + ++++++IFGG +SQ+ CL C S+ +D +DISLDI +
Sbjct: 182 -----------PSDPQSEDATLIRQIFGGYWRSQIHCLHCQGISSTMDPYLDISLDIEAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++ +PE LDG N Y C+ C V A K +++ +L++ LKRF G K
Sbjct: 231 QSVSQALEQLVKPEKLDGENAYHCNTCLGKVPASKMLTLHTPSKVLILVLKRFSDFTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + ++C+ P Y L+ +VH+G+S SGHY+ ++K G+WY
Sbjct: 291 MAKDVHYPEHLDMQPYLCEQRAGPL-VYVLYAVLVHAGWSCHSGHYFCFVKAGNGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+DS V+ LS+ Y+LF+I+ +
Sbjct: 350 DDSKVTARDATCALSQHAYVLFYIQKTE 377
>gi|119922838|ref|XP_001254514.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 480
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 183/337 (54%), Gaps = 31/337 (9%)
Query: 16 LSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDA 75
+ ++ RGG GL+NLGN+CY+N+ LQCL++TPPLA++ + QH++LC
Sbjct: 28 IPREKGRGGVGAGLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPA--------- 78
Query: 76 ERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDA 135
+ C C + + R+L + P K L F H +QEDAHEFL + ++A
Sbjct: 79 --RSACTLCAMRAHVTRALLHAGEVIRPRK--DLLAGFHRH----QQEDAHEFLMFTLNA 130
Query: 136 CHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVD 195
CL S G E ++V+++IFGG +SQ++CL C S+ D
Sbjct: 131 MQQGCL---------SASQPSGHASED----TTVIRQIFGGTWRSQIQCLRCLGVSDTFD 177
Query: 196 EIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVI 255
+DISLDI + S+++A+++ +PE LD +N Y C C + V A K++++ + +LV+
Sbjct: 178 PYLDISLDITAAQSVEQALRELVKPEKLDADNAYDCGVCLRKVPATKRLTLHSTSQVLVL 237
Query: 256 QLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYA 315
LKRF + G K + + + + L L + + P Y L+ +VHSG+S + GHY+
Sbjct: 238 VLKRFTLVSGAKRAQEVRYPQCLDLQPYTSERKAGPL-GYVLYAVLVHSGWSCERGHYFC 296
Query: 316 YIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
Y++ G+WY +D+ V+ LS+ Y+LF+ R
Sbjct: 297 YVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 333
>gi|296083782|emb|CBI23999.3| unnamed protein product [Vitis vinifera]
Length = 892
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 144/407 (35%), Positives = 197/407 (48%), Gaps = 28/407 (6%)
Query: 21 KRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
K G PP GL N GNSC+ N VLQCL YT PL + L+ H C+ R
Sbjct: 114 KPGFPPCGLINCGNSCFANVVLQCLAYTRPLVAYLLEKGHRRQCR-----------RNDW 162
Query: 81 CPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
C C + + R+ +P I S L + G+QEDAHEF+R+ ID + C
Sbjct: 163 CFLCEFQVHVERASHSPQPF-SPINILSRLPSIGGNLGYGKQEDAHEFMRFAIDTMQSVC 221
Query: 141 LRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDI 200
L GG S ET ++++ IFGG LQSQV C C SN+ + +MD+
Sbjct: 222 LD-----EFGGEKSVHPSSQET-----TLIQHIFGGHLQSQVICTKCSKISNQYENMMDL 271
Query: 201 SLDIL-NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
+++I ++ SL+E + +F E L G N YKCD C V A K++++ +PNIL I LKR
Sbjct: 272 TVEIHGDAASLEECLDQFTVTEWLHGENMYKCDGCNDYVKASKRLTVRHAPNILTIALKR 331
Query: 260 FEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYI 317
F+ GK++K + F E L LS +M KA YKL+ +VH S GHY Y
Sbjct: 332 FQSGRFGKLNKRVTFPETLDLSPYMSKAVVGTDV-YKLYAVVVHLDMLNASFFGHYVCYT 390
Query: 318 KDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGT--FASNGVKSHENG 375
KD G WY +D V+ L +VLS+ Y+L + R R T F + E
Sbjct: 391 KDFGGNWYRIDDCKVTRVELDDVLSQGAYMLLYSRVCVRSSCLKTTEPFKKENEQMVEVA 450
Query: 376 KEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKVEKVPSNPRLKF 422
+E K V A K + +SSR PS + KV + L F
Sbjct: 451 QEVEPCSKQPVECFTKAEKSNHVESSRFLPSESNACSKVSNCEELSF 497
>gi|359476454|ref|XP_002271840.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Vitis
vinifera]
Length = 940
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 144/407 (35%), Positives = 197/407 (48%), Gaps = 28/407 (6%)
Query: 21 KRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
K G PP GL N GNSC+ N VLQCL YT PL + L+ H C+ R
Sbjct: 190 KPGFPPCGLINCGNSCFANVVLQCLAYTRPLVAYLLEKGHRRQCR-----------RNDW 238
Query: 81 CPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
C C + + R+ +P I S L + G+QEDAHEF+R+ ID + C
Sbjct: 239 CFLCEFQVHVERASHSPQPF-SPINILSRLPSIGGNLGYGKQEDAHEFMRFAIDTMQSVC 297
Query: 141 LRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDI 200
L GG S ET ++++ IFGG LQSQV C C SN+ + +MD+
Sbjct: 298 LD-----EFGGEKSVHPSSQET-----TLIQHIFGGHLQSQVICTKCSKISNQYENMMDL 347
Query: 201 SLDIL-NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
+++I ++ SL+E + +F E L G N YKCD C V A K++++ +PNIL I LKR
Sbjct: 348 TVEIHGDAASLEECLDQFTVTEWLHGENMYKCDGCNDYVKASKRLTVRHAPNILTIALKR 407
Query: 260 FEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYI 317
F+ GK++K + F E L LS +M KA YKL+ +VH S GHY Y
Sbjct: 408 FQSGRFGKLNKRVTFPETLDLSPYMSKAVVGTDV-YKLYAVVVHLDMLNASFFGHYVCYT 466
Query: 318 KDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGT--FASNGVKSHENG 375
KD G WY +D V+ L +VLS+ Y+L + R R T F + E
Sbjct: 467 KDFGGNWYRIDDCKVTRVELDDVLSQGAYMLLYSRVCVRSSCLKTTEPFKKENEQMVEVA 526
Query: 376 KEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKVEKVPSNPRLKF 422
+E K V A K + +SSR PS + KV + L F
Sbjct: 527 QEVEPCSKQPVECFTKAEKSNHVESSRFLPSESNACSKVSNCEELSF 573
>gi|359324293|ref|XP_003640328.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 181/325 (55%), Gaps = 30/325 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYT PLA++ L QH + C+ R+ C C L+
Sbjct: 81 GLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCR-----------RQTSCMLCTLQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
++R L P ++ L + F +QEDAHE+L +++DA CL KL
Sbjct: 130 AHLMRVLC------HPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKL- 182
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S++++++FGG +SQ++CL C S+ ++ +DISLDI ++
Sbjct: 183 -----------SDPECPQDSTLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGDA 231
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++ +PE+L+G N Y C C + V A K +++ SP +L++ L+RF + G K
Sbjct: 232 HSVSQALEQLVKPELLEGENAYHCSKCLEKVPASKVLTLHTSPKVLILVLRRFSDLTGNK 291
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + ++ + P Y L+ +VH+G S SGHY+ ++K G+WY
Sbjct: 292 MTKEVQYPERLDMQHYLSEQRAGPL-VYVLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKM 350
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ VS + L + Y+LF+++
Sbjct: 351 DDAKVSACDVTCALRQPAYVLFYMQ 375
>gi|357117231|ref|XP_003560376.1| PREDICTED: uncharacterized protein LOC100846465 [Brachypodium
distachyon]
Length = 1046
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 180/339 (53%), Gaps = 33/339 (9%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSC+ N VLQCL+ T PL + L H+ C + D C C
Sbjct: 202 PCGLVNCGNSCFANVVLQCLSCTRPLVAYLLWKDHARECSRRHED---------WCFLCE 252
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
L+ I ++ L AP KI S L + G+QEDAHEF+R+ ID + CL
Sbjct: 253 LQSHIQKATD-SLHPFAPMKILSHLPNIGGNLGFGKQEDAHEFMRFAIDKMQSACL---- 307
Query: 146 LRRKGGGSSGGGGGGETINGGS----SVVKEIFGGALQSQVKCLACGAESNKVDEIMDIS 201
GGE + S ++++ IFGG L+SQV+C ACG SN+ + +MD++
Sbjct: 308 ----------DEFGGEKVVDLSIQETTIIQHIFGGRLRSQVQCTACGMVSNRYENMMDLT 357
Query: 202 LDILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF 260
++I SL+E + +F E LDG+NKY+CD C V A+K +++ Q+PNIL I LKRF
Sbjct: 358 VEIHGDAESLEECLNQFTAVEWLDGDNKYRCDGCSDYVKAQKHLTVHQAPNILTITLKRF 417
Query: 261 EGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYIK 318
+ GK++K + F L L+ +M ++ D +Y L+ +VH S GHY YIK
Sbjct: 418 QSGRYGKLNKRVTFPTKLDLTRYM--STTDGSDQYDLYAVVVHLDMMNASYFGHYICYIK 475
Query: 319 DAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
D GRW +D V + +EV ++ Y+L + R RP
Sbjct: 476 DFRGRWRKVDDCKVMIVDEEEVHAQGAYMLLYSRRTARP 514
>gi|443897312|dbj|GAC74653.1| ubiquitin carboxyl-terminal hydrolase [Pseudozyma antarctica T-34]
Length = 744
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 117/330 (35%), Positives = 181/330 (54%), Gaps = 26/330 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTG--DSALDAERKRECPFCI 85
GL N GN+CY+NSV+Q L +TPPLA L + L + G ++A DA
Sbjct: 196 GLSNYGNTCYMNSVMQALVHTPPLAFALLTQELDVLHGEWGGKPNAAFDA-------VTA 248
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL-RLK 144
+ RSL +AP + L+ FA+ + GRQEDAHE+LR++++A +CL R
Sbjct: 249 MHSFAKRSLQGTRPTNAPQEFNRNLKAFAKPLRQGRQEDAHEYLRFLLEALQQSCLARAP 308
Query: 145 KLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI 204
K + + ++ V + FGG L+S+V C +CG S+ D MD+SLD+
Sbjct: 309 KSLKPDDPARR-----------TTFVHKTFGGKLRSRVMCHSCGHNSDTFDPFMDLSLDV 357
Query: 205 LNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI 263
SL +A++ F + L G KYKCD CK+ V A KQ +I +P L + LKRF +
Sbjct: 358 RKGINSLTDALRAFVAKDHLTGAEKYKCDKCKRKVDATKQFTIDAAPPALTVHLKRFT-V 416
Query: 264 FGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR 323
FGGK+ + IAF+++L ++ ++ + P Y+L+ T+ H G P+SGHY A ++ G+
Sbjct: 417 FGGKVSRQIAFDDMLNIAPYLS-VNNGPA-RYRLYATVHHYGSGPNSGHYVASVRSPSGK 474
Query: 324 WYCCNDSYVS-VSTLQEVLSEKVYILFFIR 352
W +DS+V+ + + YILF++R
Sbjct: 475 WMRMDDSHVAEMGRSGPTNDQSAYILFYLR 504
>gi|170091622|ref|XP_001877033.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648526|gb|EDR12769.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 312
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 183/346 (52%), Gaps = 37/346 (10%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQ 66
+ M+W S S GL N GN+C+LNS LQCL +TPPL + + H + C+
Sbjct: 4 IDMTWPASCNSAA--------GLFNSGNTCFLNSALQCLLHTPPLLR--IIISHKT-CRM 52
Query: 67 LTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAH 126
G C C L + IV++ + P+ I + L+ A+H + GRQED H
Sbjct: 53 DKG----------FCMSCNLREVIVKAYGSKGPV-VPSSITNRLQTIAKHMRKGRQEDTH 101
Query: 127 EFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLA 186
EFLRY IDA +CL +G + ++ V ++FGG L+S+V C
Sbjct: 102 EFLRYAIDALQKSCL------------AGHSPKIDPKIAETTWVHKVFGGRLRSRVTCRD 149
Query: 187 CGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSI 246
CG S+ D I+D+SLDI S SL++A++ F + L G +KYKC+ CKK V A K+ +I
Sbjct: 150 CGHNSDTFDSILDLSLDIHKSESLRDALRTFVAIDYLRGADKYKCEKCKKHVVAEKRFTI 209
Query: 247 LQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF 306
++P +L + KRF + G KI I FEE L L FM + P Y L+G I H+G
Sbjct: 210 HEAPLVLTVHFKRFSPM-GRKIGHHINFEEHLSLKPFMSEGQHGPS--YSLYGIICHAGG 266
Query: 307 SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
P+SGHYYA++K G+W+ ND S + Y+LF+IR
Sbjct: 267 GPNSGHYYAFVKAKDGQWWEMNDEMRSRVGSAPTNKKTAYMLFYIR 312
>gi|345781818|ref|XP_851591.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 179/325 (55%), Gaps = 30/325 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYT PLA++ L QH + C+ R+ C C L+
Sbjct: 81 GLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCR-----------RQTSCMLCTLQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R L P ++ L + F +QEDAHE+L +++DA CL KL
Sbjct: 130 AHLTRVLC------HPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKL- 182
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S++++++FGG +SQ++CL C S+ ++ +DISLDI +
Sbjct: 183 -----------SDPECPQDSTLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGAA 231
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++ +PE+L+G N Y C C + V A K +++ SP +L++ L+RF + G K
Sbjct: 232 HSISQALEQLMKPELLEGENAYHCSKCLEKVPASKVLTLHTSPKVLILVLRRFSDLTGNK 291
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + ++ + P Y L+ +VH+G S SGHY+ ++K G+WY
Sbjct: 292 MTKEVQYPERLDMQHYLSEQRAGPL-VYVLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKM 350
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ VS + L + Y+LF+++
Sbjct: 351 DDAKVSACDVTCALRQPAYVLFYMQ 375
>gi|326432192|gb|EGD77762.1| hypothetical protein PTSG_08851 [Salpingoeca sp. ATCC 50818]
Length = 1156
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 179/336 (53%), Gaps = 29/336 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ LQCL YTP LANFCL Q+ + T DA + ++E
Sbjct: 113 GLGNLGNTCFLNATLQCLAYTPALANFCLSGQYQ---RTHTPQPGFDAMK-------LVE 162
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ RSL+ P I + LR + F+ +Q+DAHEF ++DA L
Sbjct: 163 LHVHRSLTSPKRTVLPKGIINHLRQINKAFRHYQQQDAHEFFICLLDAMQTALL------ 216
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + ++V+ IFGG L+SQ++C+ C SN + D+S+DI +
Sbjct: 217 -------GDYKNLDLRVQETTVLHHIFGGYLRSQIQCVRCKHCSNTFESFFDLSIDIKAA 269
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI--FG 265
SL A+Q+F E+L N Y C CK V A KQ++I + PN+L IQLKRF + FG
Sbjct: 270 NSLTRALQQFVTKELLFKTNSYSCSGCKNKVPATKQLTIHRLPNVLCIQLKRFSFMSHFG 329
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQP----EYKLFGTIVHSGFSPDSGHYYAYIKDAI 321
K+ +++ L + F+ ++ + Y+L+G +VH G + SGHY AY++ A
Sbjct: 330 SKLRHKVSYPMQLNVHEFLSRSIRSRISRGACRYELYGVLVHLGATLSSGHYIAYVRAAN 389
Query: 322 GRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
G WYC +D V S EVL++ Y+LF+ R + +P
Sbjct: 390 GMWYCADDDDVRFSKENEVLNQAAYMLFYTRTDNKP 425
>gi|224143963|ref|XP_002325138.1| predicted protein [Populus trichocarpa]
gi|222866572|gb|EEF03703.1| predicted protein [Populus trichocarpa]
Length = 436
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 118/327 (36%), Positives = 184/327 (56%), Gaps = 26/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNSV+QCLTYT PLA + +H + C + G C C ++
Sbjct: 110 GLENLGNTCFLNSVVQCLTYTEPLAAYLQSGKHQNSC-HVAG----------FCALCAIQ 158
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
K + R+L P + S LR + +F+ RQEDAHE++ ++++ H CL
Sbjct: 159 KHVSRALQSSGRSLVPKDLVSNLRCISRNFRNARQEDAHEYMVNLLESMHKCCL------ 212
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G S E S+V +IFGG L+SQV+C C SNK D +D+SL+I +
Sbjct: 213 -PSGVPSESPAAYE-----KSLVHKIFGGHLRSQVECQQCSYCSNKFDPFLDLSLEIAKA 266
Query: 208 CSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF-G 265
+L A++ F EVLDG K Y+C CK+ V A+K++++ ++P++L I LKRF G
Sbjct: 267 DTLPVALRNFTAAEVLDGGEKQYQCQRCKQKVRAKKRLTVHKAPHVLTIHLKRFHAHDPG 326
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
K+DK + F+ L + F+ S + + +Y L+G +VH G + SGHY +++ + W+
Sbjct: 327 RKVDKKVIFDRSLDIKPFV-SGSYEGELKYSLYGVLVHYGHNTHSGHYVCFVRTSSNMWH 385
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIR 352
ND+ V + + VL +K Y+LF++R
Sbjct: 386 LLNDNQVRQVSEKTVLEQKAYMLFYVR 412
>gi|297468710|ref|XP_002706267.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 763
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 177/325 (54%), Gaps = 31/325 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CY+N+ LQCL++TPPLA++ + QH++LC + C C +
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPA-----------RSACTLCAMR 141
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R+L + P K L F H +QEDAHEFL + ++A CL
Sbjct: 142 AHVTRALLHAGEVIRPRK--DLLAGFHRH----QQEDAHEFLMFTLNAMQQGCL------ 189
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S G E ++V+++IFGG +SQ++CL C S+ D +DISLDI +
Sbjct: 190 ---SASQPSGHASED----TTVIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAA 242
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE LD +N Y C C + V A K++++ + +LV+ LKRF + G K
Sbjct: 243 QSVEQALRELVKPEKLDADNAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAK 302
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ + + + L L + + P Y L+ +VHSG+S + GHY+ Y++ G+WY
Sbjct: 303 RAQEVRYPQCLDLQPYTSERKAGPL-GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKM 361
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ V+ LS+ Y+LF+ R
Sbjct: 362 DDAKVTACDETAALSQSAYVLFYAR 386
>gi|359321516|ref|XP_853986.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 573
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 181/325 (55%), Gaps = 30/325 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYT PLA++ L QH + C+ R+ C C L+
Sbjct: 81 GLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCR-----------RQTSCMLCTLQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
++R L P ++ L + F +QEDAHE+L +++DA CL KL
Sbjct: 130 THLMRVLC------HPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKL- 182
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S++++++FGG +SQ++CL C S+ ++ +DISLDI ++
Sbjct: 183 -----------SDPECPQDSTLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGDA 231
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++ +PE+L+G N Y C C + V A K +++ SP +L++ L+RF + G K
Sbjct: 232 HSVSQALEQLVKPELLEGENAYHCSKCLEKVPASKVLTLHTSPKVLILVLRRFSDLTGNK 291
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + ++ + P Y L+ +VH+G S SGHY+ ++K G+WY
Sbjct: 292 MTKEVQYPERLDMQHYLSEQRAGPL-VYVLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKM 350
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ VS + L + Y+LF+++
Sbjct: 351 DDAKVSACDVTCALRQPAYVLFYMQ 375
>gi|359321530|ref|XP_851647.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 180/325 (55%), Gaps = 30/325 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYT PLA++ L QH + C+ R+ C C L+
Sbjct: 81 GLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCR-----------RQTSCMLCTLQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R L P ++ L + F +QEDAHE+L +++DA CL KL
Sbjct: 130 AHLTRVLC------HPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKLS 183
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S++++++FGG +SQ++CL C S+ ++ +DISLDI ++
Sbjct: 184 DPERPQD------------STLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGDA 231
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++ +PE+L+G N Y C C + V A K +++ SP +L++ L+RF + G K
Sbjct: 232 HSVSQALEQLVKPELLEGENAYHCSKCLEKVPASKVLTLHTSPKVLILVLRRFSNLTGNK 291
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L L ++ + P Y L+ +VH+G S SGHY+ +IK G+WY
Sbjct: 292 MTKEVQYPERLDLQHYLSEQRAGPL-VYVLYAVLVHAGRSCHSGHYFCFIKAGNGQWYKM 350
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ VS + L + Y+LF+++
Sbjct: 351 DDAKVSSCDVICALRQPAYVLFYMQ 375
>gi|299470395|emb|CBN80156.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 782
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 129/361 (35%), Positives = 184/361 (50%), Gaps = 46/361 (12%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFC-- 84
+GL N+GN+CYLNS+LQCL+Y PPLA L +S +S + FC
Sbjct: 134 VGLENMGNTCYLNSILQCLSYVPPLAQHLLNGSYSQGSHATCSESPFSFNGSTD--FCED 191
Query: 85 ----ILEKRI-----VRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDA 135
++K + +S S + P LR E F+ GRQEDAHEFLR+++D
Sbjct: 192 DILGAMQKLVGQIHQTKSGSAEQQAIRPRTFSDNLRKIGEKFRRGRQEDAHEFLRHLVDK 251
Query: 136 CHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVD 195
+ L R+G ET + + +FGG L+SQ+KC CG S+ D
Sbjct: 252 MAGS-----YLERRGVDPFAPNRLAET-----TPIHRVFGGYLRSQLKCSECGFCSDTFD 301
Query: 196 EIMDISLDI---------LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSI 246
MD+++++ +N SL+ A+++F PE L N++KC C KLV A K +S+
Sbjct: 302 PFMDLAMNVEKVDSSGVAMNERSLQAALRRFTAPETLGAGNEWKCGGCNKLVEAEKNLSV 361
Query: 247 LQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHS 304
+ PN LV QLKRF G G K+ I+F + L L + + Y L G +VHS
Sbjct: 362 FKPPNALVFQLKRF-GFTNGPRKVKDHISFGDKLNLEV----SGPERWANYDLTGVVVHS 416
Query: 305 GFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRAN-------QRP 357
G + SGHYYAY++ + G W NDS V+ TL VL +K Y+LF+ R QRP
Sbjct: 417 GKTMSSGHYYAYVRSSAGSWARMNDSVVTKVTLDTVLRDKAYVLFYTRRPPPAPPAVQRP 476
Query: 358 V 358
+
Sbjct: 477 I 477
>gi|119929781|ref|XP_874913.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 558
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 177/325 (54%), Gaps = 31/325 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CY+N+ LQCL++TPPLA++ + QH++LC + C C +
Sbjct: 118 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPA-----------RSACTLCAMR 166
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R+L + P K L F H +QEDAHEFL + ++A CL
Sbjct: 167 AHVTRALLHAGEVIRPRK--DLLAGFHRH----QQEDAHEFLMFTLNAMQQGCL------ 214
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S G E ++V+++IFGG +SQ++CL C S+ D +DISLDI +
Sbjct: 215 ---SASQPSGHASED----TTVIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAA 267
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE LD +N Y C C + V A K++++ + +LV+ LKRF + G K
Sbjct: 268 QSVEQALRELVKPEKLDADNAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAK 327
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ + + + L L + + P Y L+ +VHSG+S + GHY+ Y++ G+WY
Sbjct: 328 RAQEVRYPQCLDLQPYTSERKAGPL-GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKM 386
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ V+ LS+ Y+LF+ R
Sbjct: 387 DDAKVTACDETAALSQSAYVLFYAR 411
>gi|334184421|ref|NP_001189593.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
gi|227206324|dbj|BAH57217.1| AT2G24640 [Arabidopsis thaliana]
gi|330252514|gb|AEC07608.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
Length = 502
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 176/335 (52%), Gaps = 26/335 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSC+ N VLQCL++T PL + L+ H C+ R C C
Sbjct: 3 PCGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECR-----------RNDWCFLCE 51
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
E + R+ +P I S L + GRQEDAHE +R+ ID + CL
Sbjct: 52 FENHLDRANYSRFPF-SPMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCLD--- 107
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
GG ET ++++ IFGG LQSQV+C AC S++ + +MD++++I
Sbjct: 108 --EFGGEKVVPPRAQET-----TLIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIH 160
Query: 206 -NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
++ SL+E + +F E L G+N YKCD C V A K++SI +PNIL I LKRF+G
Sbjct: 161 GDAVSLEECLDQFTAKEWLQGDNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQGGR 220
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYIKDAIG 322
GK++K I+F E L +M + YKL+ IVH S GHY Y+KD G
Sbjct: 221 FGKLNKRISFPETFDLGPYMSGGGEGSDV-YKLYAVIVHLDMLNASFFGHYICYVKDFRG 279
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
WY +DS V L++VLS++ Y+L + R RP
Sbjct: 280 NWYRIDDSEVEKVELEDVLSQRAYMLLYSRVQPRP 314
>gi|281345036|gb|EFB20620.1| hypothetical protein PANDA_020318 [Ailuropoda melanoleuca]
Length = 411
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 174/328 (53%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CY+N+VLQCLTYTPPLA+ L QH C + T C C L+
Sbjct: 81 GLQNLGNTCYVNAVLQCLTYTPPLASSMLSQQHQQTCGKQTF-----------CMLCALQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R+L P + L F +QEDAHEFL + + A CL K
Sbjct: 130 AHMTRALC------HPGDVIRPLPRLLAAFHTHQQEDAHEFLMFTLGAMQQACLPEDK-- 181
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+ + ++++++IFGG +SQ+ CL C S+ +D +DISLDI +
Sbjct: 182 -----------PSDPQSEDATLIRQIFGGYWRSQIHCLHCQGISSTMDPYLDISLDIEAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++ +PE LDG N Y C+ C V A K +++ +L++ LKRF G K
Sbjct: 231 QSVSQALEQLVKPEKLDGENAYHCNTCLGKVPASKMLTLHTPSKVLILVLKRFSDFTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + ++C+ P Y L+ +VH+G+S SGHY+ ++K G+WY
Sbjct: 291 MAKDVHYPEHLDMQPYLCEQRAGPL-VYVLYAVLVHAGWSCHSGHYFCFVKAGNGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+DS V+ LS+ Y+LF+I+ +
Sbjct: 350 DDSKVTARDATCALSQHAYVLFYIQKTE 377
>gi|291411125|ref|XP_002721843.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 500
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/446 (29%), Positives = 214/446 (47%), Gaps = 53/446 (11%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N GN+CYLN+ LQCLTYTPPLAN+ L HS C+ R C C +E
Sbjct: 53 GLQNTGNTCYLNAALQCLTYTPPLANYMLSQVHSQSCR-----------RSDRCILCAVE 101
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ +L +P + ++ A F RQEDAHEFL + +D L
Sbjct: 102 THFLWAL------HSPGDVIQPCQVLAAGFHTNRQEDAHEFLMFALDVLKAAGLP----- 150
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + G G E S ++I GG +SQ++CL C S +D ++I+LDI +
Sbjct: 151 ----GLTDGVGPQED----QSPSQQIVGGHWRSQIQCLQCQGISETLDPYLEIALDIKTA 202
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+Q QPE L G N Y C C++ +A K +++ + +L+ LKRF G K
Sbjct: 203 DSVEQALQHLVQPEELAGENAYHCATCRQKTAASKTLTLQSAGKVLLFVLKRFSEFTGEK 262
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ + + E L + +M + + P +Y L+ +VH G SGHY+ Y+K G WY
Sbjct: 263 LGGQVHYPECLDMRPYMSQQNGRPL-DYVLYAVLVHVGLRCQSGHYFCYVKAGSGHWYKM 321
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR--------ANQRPVSANGTFASNGVKSHENGKEAY 379
+D+ V+ VL++ Y+LF++R P + + H G+
Sbjct: 322 DDAKVTACDTTCVLNQSAYVLFYVRKSGVGGEHGTVSPGRGPSDLEAANTRGHTPGE--- 378
Query: 380 KGVKGTVPLKAVATKPSAEQSSRKTPSTISKVEKVPSNPRLKFSISGSSGCKGVPPT-SN 438
++ PL+A ++ EQ+++ + + S PR FS+ + V PT +
Sbjct: 379 --LERPSPLEAGESEEHLEQTTQDLTLDAWQALQAQSRPRSAFSL------RTVEPTLPS 430
Query: 439 GKVNVHKSQSVKMNGVVKDSVPKEKS 464
+ +H+++S G+ K +E++
Sbjct: 431 NAIVIHQARSAA--GMRKHHPDQERA 454
>gi|326930828|ref|XP_003211542.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Meleagris
gallopavo]
Length = 874
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 160/280 (57%), Gaps = 16/280 (5%)
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
D+ + C C+++ ++++ + P L+ A HF+ G QEDAHEFLRY I
Sbjct: 13 DSHQGGFCMMCVMQNHMIQAFANSGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTI 72
Query: 134 DACHNTCLR-LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESN 192
DA CL +L R+ +++V +IFGG L+S+VKC C + S+
Sbjct: 73 DAMQKACLSGCTRLDRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSD 118
Query: 193 KVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNI 252
D +D+SL+I + ++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+
Sbjct: 119 TYDPYLDVSLEIRQAANIVRALELFVKSDVLSGENAYMCARCKKKVPASKRFTIHRASNV 178
Query: 253 LVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGH 312
L + LKRF GGKI K + + E L + +M + + DP Y L+ +VHSG+S +GH
Sbjct: 179 LTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNTGDPV-MYGLYAVLVHSGYSCHAGH 237
Query: 313 YYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
YY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 238 YYCYVKASNGQWYQMNDSLVHCSNIKVVLNQQAYVLFYLR 277
>gi|320165971|gb|EFW42870.1| DUB1 [Capsaspora owczarzaki ATCC 30864]
Length = 495
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/309 (39%), Positives = 174/309 (56%), Gaps = 26/309 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N+GN+C+LNSVLQCLTYTPPLA++ L HS C+ C C LE
Sbjct: 206 GLSNMGNTCFLNSVLQCLTYTPPLASYALSGAHSQACR-----------LPEICMCCELE 254
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ I R+L V AP I LR F+ G QEDAHEFLR ++++ + L+
Sbjct: 255 QHIRRAL-VHRGNIAPKPIIRQLRKIGS-FRLGHQEDAHEFLRCLMESVQQSILK----- 307
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S GG +++V ++ GG S+V C C A S+ + +D+SLDI N
Sbjct: 308 -----SFGGEKRIAHRVQETTLVHQMLGGYSNSRVHCTNCKANSDTYEAFLDLSLDIGNC 362
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI--FG 265
S+ +A+ K+ E L+ N Y C+ CK+ V+A KQ SI ++PN+L + LKRF+ +
Sbjct: 363 ASVADALAKYTVIERLE-KNAYNCEKCKRKVTATKQTSIHRAPNVLSLHLKRFDFLRSHN 421
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KI++ I F+E L LS FM K Y+L+ +VH+G S SGHYY Y++++ +WY
Sbjct: 422 AKINRPIRFDEELDLSPFMSKGLPQQNLRYRLYAVLVHAGHSCHSGHYYCYVRNSDNQWY 481
Query: 326 CCNDSYVSV 334
NDS+VS+
Sbjct: 482 EMNDSHVSI 490
>gi|73979654|ref|XP_854031.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Canis
lupus familiaris]
Length = 535
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 180/326 (55%), Gaps = 32/326 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYT PLA++ L QH + C+ R+ C C L+
Sbjct: 81 GLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCR-----------RQTSCMLCTLQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R L P ++ L + F +QEDAHE+L +++DA CL KL
Sbjct: 130 AHLTRVLC------HPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKL- 182
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S++++++FGG +SQ++CL C S+ ++ +DISLDI ++
Sbjct: 183 -----------SDPECPQDSTLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGDA 231
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++ +PE+L+G N Y C C + V A K +++ SP +L++ L+RF + G K
Sbjct: 232 HSVSQALEQLMKPELLEGENAYHCSKCLEKVPASKVLTLHTSPKVLILVLRRFSDLTGNK 291
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
+ K + + E L + C + Q P Y L+ +VH+G S SGHY+ ++K G+WY
Sbjct: 292 MTKEVQYPERLDMQH--CLSEQRAGPLVYVLYAVLVHTGRSCHSGHYFCFVKAGNGQWYK 349
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ VS + L + Y+LF+++
Sbjct: 350 MDDAKVSACDVTCALRQPAYVLFYMQ 375
>gi|255579710|ref|XP_002530694.1| cysteine-type endopeptidase, putative [Ricinus communis]
gi|223529750|gb|EEF31689.1| cysteine-type endopeptidase, putative [Ricinus communis]
Length = 777
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/357 (35%), Positives = 188/357 (52%), Gaps = 43/357 (12%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GLRN GNSCY N+V+QCL +T PL ++ ++ HS CK K C C
Sbjct: 353 PFGLRNCGNSCYANTVIQCLAFTRPLTSYFVRGLHSKSCK------------KGWCFNCE 400
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
+ I+++ + L +P +I S ++ H GR+EDAHEFLRY +D + L
Sbjct: 401 FQLLILKAREGESPL-SPIRILSKIQKIGSHLGHGREEDAHEFLRYAVDTMQSVFL---- 455
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
K GS T+ +KC+ C +S + + IMD++++I
Sbjct: 456 ---KEAGSLVPLSEESTL------------------IKCMRCLGKSERFERIMDLTVEID 494
Query: 206 -NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
N SL++A+ +F E+LDG NKY C CK V A+K+++IL++PNIL I LKRF+
Sbjct: 495 GNIESLEQALTQFTADEMLDGENKYNCSRCKSYVKAKKKLTILEAPNILTIVLKRFQSSN 554
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPD--SGHYYAYIKDAIG 322
GK++K++ F EVL ++ +MC S D P+Y L+ +VH D +GHY YIK + G
Sbjct: 555 FGKLNKSVRFPEVLDMAPYMCGTS-DKSPQYSLYAVVVHRDTMSDASTGHYVCYIKTSRG 613
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIR-ANQRPVSANGTFASNGVKSHENGKEA 378
W+ NDS V L+ VL E+ Y+L + R Q P ++ KS + EA
Sbjct: 614 EWFGINDSIVKPVELKRVLLEEAYMLLYARHCPQAPAVRKSNVETHCTKSKKRILEA 670
>gi|119914980|ref|XP_001256113.1| PREDICTED: ubiquitin specific peptidase 17-like 2-like [Bos taurus]
Length = 533
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 177/325 (54%), Gaps = 31/325 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CY+N+ LQCL++TPPLA++ + QH++LC + C C +
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPA-----------RSACTLCAMR 141
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R+L + P K L F H +QEDAHEFL + ++A CL
Sbjct: 142 AHVTRALLHAGEVIRPRK--DLLAGFHRH----QQEDAHEFLMFTLNAMQQGCL------ 189
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S G E ++V+++IFGG +SQ++CL C S+ D +DISLDI +
Sbjct: 190 ---SASQPSGHASED----TTVIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAA 242
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE LD +N Y C C + V A K++++ + +LV+ LKRF + G K
Sbjct: 243 QSVEQALRELVKPEKLDADNAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAK 302
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ + + + L L + + P Y L+ +VHSG+S + GHY+ Y++ G+WY
Sbjct: 303 RAQEVRYPQCLDLQPYTSERKAGPL-GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKM 361
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ V+ LS+ Y+LF+ R
Sbjct: 362 DDAKVTACDETAALSQSAYVLFYAR 386
>gi|119929526|ref|XP_001251337.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Bos taurus]
Length = 533
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 177/325 (54%), Gaps = 31/325 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CY+N+ LQCL++TPPLA++ + QH++LC + C C +
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPA-----------RSACTLCAMR 141
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R+L + P K L F H +QEDAHEFL + ++A CL
Sbjct: 142 AHVTRALLHAGEVIRPRK--DLLAGFHRH----QQEDAHEFLMFTLNAMQQGCLS----- 190
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S G E ++V+++IFGG +SQ++CL C S+ D +DISLDI +
Sbjct: 191 ----ASQPSGHASED----TTVIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAA 242
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE LD +N Y C C + V A K++++ + +LV+ LKRF + G K
Sbjct: 243 QSVEQALRELVKPEKLDADNAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAK 302
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ + + + L L + + P Y L+ +VHSG+S + GHY+ Y++ G+WY
Sbjct: 303 RAQEVRYPQCLDLQPYTSERKAGPL-GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKM 361
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ V+ LS+ Y+LF+ R
Sbjct: 362 DDAKVTACDETAALSQSAYVLFYAR 386
>gi|18400597|ref|NP_565576.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
gi|75265927|sp|Q9SJA1.2|UBP19_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 19; AltName:
Full=Deubiquitinating enzyme 19; Short=AtUBP19; AltName:
Full=Ubiquitin thioesterase 19; AltName:
Full=Ubiquitin-specific-processing protease 19
gi|13430806|gb|AAK26025.1|AF360315_1 putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|15810655|gb|AAL07252.1| putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|20197976|gb|AAD23896.2| putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|330252513|gb|AEC07607.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
Length = 672
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 176/335 (52%), Gaps = 26/335 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSC+ N VLQCL++T PL + L+ H C+ R C C
Sbjct: 173 PCGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECR-----------RNDWCFLCE 221
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
E + R+ +P I S L + GRQEDAHE +R+ ID + CL
Sbjct: 222 FENHLDRANYSRFPF-SPMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCLD--- 277
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
GG ET ++++ IFGG LQSQV+C AC S++ + +MD++++I
Sbjct: 278 --EFGGEKVVPPRAQET-----TLIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIH 330
Query: 206 -NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
++ SL+E + +F E L G+N YKCD C V A K++SI +PNIL I LKRF+G
Sbjct: 331 GDAVSLEECLDQFTAKEWLQGDNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQGGR 390
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYIKDAIG 322
GK++K I+F E L +M + YKL+ IVH S GHY Y+KD G
Sbjct: 391 FGKLNKRISFPETFDLGPYMSGGGEGSDV-YKLYAVIVHLDMLNASFFGHYICYVKDFRG 449
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
WY +DS V L++VLS++ Y+L + R RP
Sbjct: 450 NWYRIDDSEVEKVELEDVLSQRAYMLLYSRVQPRP 484
>gi|303284199|ref|XP_003061390.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456720|gb|EEH54020.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 308
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 182/349 (52%), Gaps = 48/349 (13%)
Query: 9 MSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLT 68
M W E RK G GL NLGN+C++N+V+QCLT+TPPLA FCL +H + ++
Sbjct: 1 MEW-----PEARKIGA---GLANLGNTCFMNAVMQCLTHTPPLAQFCLAGEHRNALYEMG 52
Query: 69 GD--SALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAH 126
AL E +R APA LR ++ F+ GRQEDAH
Sbjct: 53 EHVSRALGREGRRHTI-------------------APATFVKNLRALSKTFRKGRQEDAH 93
Query: 127 EFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLA 186
EF R ++DA H C+ + + K G + +S V ++FGG L+S+V C
Sbjct: 94 EFARCLLDAMHKRCVDAARPKPKEGSA----------RSETSFVWQVFGGRLRSRVACKT 143
Query: 187 CGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCD---NCKKLVSARKQ 243
CG S+ D MD+SLD+ S S++ A++ + EVLDG NKYKC+ + A KQ
Sbjct: 144 CGKMSDTFDSFMDLSLDVARSRSVQSALKSYTAVEVLDGANKYKCEMGPGKPHMTRATKQ 203
Query: 244 MSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP--QPEYKLFGTI 301
+I +P +L IQ + K+++ + + L +S M AS + Y LFG +
Sbjct: 204 FTIDAAPKVLTIQAR----FTRRKLNQFVEYPTRLDVSEAMSDASPRARGRERYSLFGVL 259
Query: 302 VHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
VHSG S SGHYY Y+K + G WY +D VS + + LS++ Y+LF+
Sbjct: 260 VHSGGSMHSGHYYCYVKGSTGHWYEMDDEGVSPVSEKTALSQRAYLLFY 308
>gi|119924425|ref|XP_001250435.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Bos taurus]
Length = 533
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 177/325 (54%), Gaps = 31/325 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CY+N+ LQCL++TPPLA++ + QH++LC + C C +
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPA-----------RSACTLCAMR 141
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R+L + P K L F H +QEDAHEFL + ++A CL
Sbjct: 142 AHVTRALLHAGEVIRPRK--DLLAGFHRH----QQEDAHEFLMFTLNAMQQGCL------ 189
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S G E ++V+++IFGG +SQ++CL C S+ D +DISLDI +
Sbjct: 190 ---SASQPSGHASED----TTVIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAA 242
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE LD +N Y C C + V A K++++ + +LV+ LKRF + G K
Sbjct: 243 QSVEQALRELVKPEKLDADNAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAK 302
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ + + + L L + + P Y L+ +VHSG+S + GHY+ Y++ G+WY
Sbjct: 303 RAQEVRYPQCLDLQPYTSERKAGPL-GYVLYAVLVHSGWSCERGHYFYYVRAGNGQWYKM 361
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ V+ LS+ Y+LF+ R
Sbjct: 362 DDAKVTACDETAALSQSAYVLFYAR 386
>gi|440896875|gb|ELR48685.1| Ubiquitin carboxyl-terminal hydrolase 17, partial [Bos grunniens
mutus]
Length = 468
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 177/325 (54%), Gaps = 31/325 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CY+N+ LQCL++TPPLA++ + QH++LC + C C +
Sbjct: 28 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPA-----------RSACTLCAMR 76
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R+L + P K L F H +QEDAHEFL + ++A CL
Sbjct: 77 AHVTRALLHAGEVIRPRK--DLLAGFHRH----QQEDAHEFLMFTLNAMQQGCL------ 124
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S G E ++++++IFGG +SQ++CL C S+ D +DISLDI +
Sbjct: 125 ---SASQPSGHASED----TTIIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAA 177
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE LD +N Y C C + V A K++++ + +LV+ LKRF + G K
Sbjct: 178 QSVEQALRELVKPEKLDADNAYDCGVCLRKVPATKRLALHSTSQVLVLVLKRFTPVSGAK 237
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ + + + L L + + P Y L+ +VHSG+S + GHY+ Y++ G+WY
Sbjct: 238 RAQEVRYPQCLDLQPYTSERKAGPL-GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKM 296
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ V+ LS+ Y+LF+ R
Sbjct: 297 DDAKVTACDETAALSQSAYVLFYAR 321
>gi|297825441|ref|XP_002880603.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297326442|gb|EFH56862.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 650
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 176/335 (52%), Gaps = 26/335 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSC+ N VLQCL++T PL + L+ H C+ R C FC
Sbjct: 173 PCGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECR-----------RNDWCFFCE 221
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
E + R+ +P I S L + GRQEDAHE +R ID + CL
Sbjct: 222 FENHLDRANHSRFPF-SPMNIISRLPNIGGNLGYGRQEDAHELMRSAIDMMQSVCLD--- 277
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
GG ET ++++ IFGG LQSQV+C AC S++ + +MD++++I
Sbjct: 278 --EFGGEKVVPPRAQET-----TLIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIH 330
Query: 206 -NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
++ SL+E + +F E L G+N YKCD C V A K++SI +PNIL I LKRF+G
Sbjct: 331 GDAVSLEECLDQFTAKEWLQGDNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQGGR 390
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYIKDAIG 322
GK++K I+F E L +M + YKL+ IVH S GHY Y+KD G
Sbjct: 391 FGKLNKRISFPETFDLGPYMSSGVEGSDV-YKLYAVIVHLDMLNASFFGHYICYVKDFRG 449
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
WY +DS V L++VLS++ Y+L + R RP
Sbjct: 450 NWYRIDDSEVEKVELEDVLSQRAYMLLYSRVQPRP 484
>gi|255548628|ref|XP_002515370.1| cysteine-type endopeptidase, putative [Ricinus communis]
gi|223545314|gb|EEF46819.1| cysteine-type endopeptidase, putative [Ricinus communis]
Length = 632
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 180/345 (52%), Gaps = 26/345 (7%)
Query: 16 LSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDA 75
L K PP GL N GNSC+ N VLQCLT+T PL + L+ H C+
Sbjct: 164 LYNWNKGAFPPCGLLNCGNSCFANVVLQCLTFTRPLVAYLLEEGHQRECR---------- 213
Query: 76 ERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDA 135
R C C + + R+ +P I S L + G+QEDAHEF+R+ ID
Sbjct: 214 -RNDWCFLCEFQVHVERASKSSHPF-SPMSILSRLPNIGGNLGYGKQEDAHEFMRFAIDT 271
Query: 136 CHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVD 195
+ CL GG + +++++ IFGG LQSQV C C SN+++
Sbjct: 272 MQSVCL----------DEYGGEKAVDPAFQETTLIQHIFGGHLQSQVICTKCNKISNQLE 321
Query: 196 EIMDISLDIL-NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
+MD++++I +S SL++ +++F E L G N Y+CD C V A K+++I ++PNIL
Sbjct: 322 NMMDLTVEIHGDSGSLEDCLEQFTDREQLHGENMYRCDGCNDYVKAWKRLTIRRAPNILT 381
Query: 255 IQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GH 312
I LKRF+ GK++K +AF E L LS + + D Y+L+ +VH S GH
Sbjct: 382 IALKRFQSGRFGKLNKRVAFPESLDLSPYTSEGG-DGTDVYRLYAVVVHVDMLNASFFGH 440
Query: 313 YYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
Y YIKD G WY +D V L+EVLS+ Y+L + R + RP
Sbjct: 441 YICYIKDFCGNWYRVDDCKVRSVELEEVLSQGAYMLLYSRISARP 485
>gi|356563968|ref|XP_003550229.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 735
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 130/342 (38%), Positives = 180/342 (52%), Gaps = 26/342 (7%)
Query: 21 KRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
K G PP GL N GNSC+ N VLQCL++T PL + L+ H C
Sbjct: 178 KPGFPPCGLLNCGNSCFANVVLQCLSFTKPLVAYLLEKGHRRECSC-----------NDW 226
Query: 81 CPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
C C E + R+ +P I S L G+QEDAHEF+R+ ID + C
Sbjct: 227 CFLCEFENHVERTRLSSQAF-SPMNILSRLPNIGGTLGYGKQEDAHEFMRFSIDTMQSVC 285
Query: 141 LRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDI 200
L GG + ET ++++ IFGG LQS+V C C SN+ + +MD+
Sbjct: 286 LD-----EFGGEKAVPPNLQET-----TLIQHIFGGRLQSEVICTKCDKISNQYENMMDL 335
Query: 201 SLDIL-NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
+++I ++ SL+E + +F E LDG N YKC+ CK V A K++++ +PNIL I LKR
Sbjct: 336 TVEIHGDAASLEECLDQFTAKERLDGENMYKCEGCKDYVKAWKRLTVKCAPNILTIALKR 395
Query: 260 FEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYI 317
F+ GK++K IAF E L LS +M +A D YKL+G +VH S GHY YI
Sbjct: 396 FQSGRFGKLNKRIAFPETLNLSPYMSEAG-DGSDIYKLYGVVVHIDMLNASFFGHYICYI 454
Query: 318 KDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVS 359
KD G WY +D V ++EVLS+ Y+L + R + R S
Sbjct: 455 KDFQGNWYRIDDWKVMTVEVEEVLSQGAYMLLYSRCSARTSS 496
>gi|291411123|ref|XP_002721842.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 530
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 131/447 (29%), Positives = 216/447 (48%), Gaps = 55/447 (12%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N GN+CYLN+ LQCLTYTPPLAN+ L HS C+ R C C +E
Sbjct: 83 GLQNTGNTCYLNAALQCLTYTPPLANYMLSQVHSQSCR-----------RSDRCILCAVE 131
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ +L +P + ++ A F RQEDAHEFL + +D L+
Sbjct: 132 THFLWAL------HSPGDVIQPCQVLAAGFHTNRQEDAHEFLMFALDV----------LK 175
Query: 148 RKG-GGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
G G + G G E S ++I GG +SQ++CL C S +D ++I+LDI
Sbjct: 176 AAGLPGLTDGVGPQED----QSPSQQIVGGHWRSQIQCLQCQGISETLDPYLEIALDIKT 231
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+++A+Q QPE L G N Y C C++ +A K +++ + +L+ LKRF G
Sbjct: 232 ADSVEQALQHLVQPEELAGENAYHCATCRQKTAASKTLTLQSAGKVLLFVLKRFSEFTGE 291
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
K+ + + E L + +M + + P +Y L+ +VH G SGHY+ Y+K G WY
Sbjct: 292 KLGGQVHYPECLDMRPYMSQQNGRPL-DYVLYAVLVHVGLRCQSGHYFCYVKAGSGHWYK 350
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIR--------ANQRPVSANGTFASNGVKSHENGKEA 378
+D+ V+ VL++ Y+LF++R P + + H G+
Sbjct: 351 MDDAKVTACDTTCVLNQSAYVLFYVRKSGVGGEHGTVSPGRGPSDLEAANTRGHTPGE-- 408
Query: 379 YKGVKGTVPLKAVATKPSAEQSSRKTPSTISKVEKVPSNPRLKFSISGSSGCKGVPPT-S 437
++ PL+A ++ EQ+++ + + + PR FS+ + V PT
Sbjct: 409 ---LERPSPLEAGESEEHLEQTTQDLTLDAWQALQAQNTPRSAFSL------RTVEPTLP 459
Query: 438 NGKVNVHKSQSVKMNGVVKDSVPKEKS 464
+ + +H+++S G+ K +E++
Sbjct: 460 SNAIVIHQARSAA--GMRKHHPDQERA 484
>gi|313234290|emb|CBY10357.1| unnamed protein product [Oikopleura dioica]
Length = 742
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/329 (34%), Positives = 174/329 (52%), Gaps = 32/329 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+CYLNS LQCL +T PL N + Q+ CP L
Sbjct: 140 GLCNLGNTCYLNSSLQCLMHTAPLVNILSQSQNHPATNGF-------------CPLKALS 186
Query: 88 KRIVRSLSV--DLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
R++R+L + P +I LR A HF GRQE AHEF R +DA +C R+
Sbjct: 187 -RLIRTLQNIGPRSASRPQEIVQNLRKIASHFSYGRQECAHEFTRLFMDALLRSCTRM-- 243
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
G + +++ +FGG L+S+V C C S+ + +DI+L++
Sbjct: 244 -----------NGKVDKYEETTTIPHRVFGGWLRSRVSCSNCKHNSDTFESFLDINLEMK 292
Query: 206 NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFG 265
SL++ M+ F E+LD N YKCD CKK A K+ +I + PN+L I LKRF + G
Sbjct: 293 GCDSLQDCMRHFTMTEILDNGNMYKCDKCKKATRAAKRFTIHRPPNVLAISLKRF-NMMG 351
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
K + I F L +S + + D Y+L+ +VH+GF+ +SGHYY+Y + + G W
Sbjct: 352 NKNGREIRFSSKLDISKYCSYSKMD--NNYELYAILVHAGFTVNSGHYYSYCRTSKGTWS 409
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIRAN 354
+DS V+ ++L+ VL ++ Y+L+++R +
Sbjct: 410 RFDDSCVTPTSLENVLRQQPYMLYYVRTD 438
>gi|260801080|ref|XP_002595424.1| hypothetical protein BRAFLDRAFT_69255 [Branchiostoma floridae]
gi|229280670|gb|EEN51436.1| hypothetical protein BRAFLDRAFT_69255 [Branchiostoma floridae]
Length = 965
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 176/327 (53%), Gaps = 25/327 (7%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCIL 86
+GL N+GN+C+LNSV+QCL+YT PL N + +H C+ C C L
Sbjct: 136 VGLDNMGNTCFLNSVIQCLSYTAPLVNHLMS-EHQQSCRVSDW-----------CMMCEL 183
Query: 87 EKRIVRSLS-VDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
+ + R + + P I + L+ A+ + GRQEDAHEF V++A CL
Sbjct: 184 GRHLHRVFNNSNAHSIRPMTIINRLKSIAKTMQFGRQEDAHEFFMSVVNAMQRACLMNCN 243
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
+ +T +++V ++F G +SQV+C C SN D +D+ LDI
Sbjct: 244 I--------NPNKNVDTSTANTTIVYQVFSGYCRSQVRCCRCSNLSNTFDPFLDLPLDIR 295
Query: 206 NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFG 265
S S+++ ++++ + E + N Y C+ CK+ A K++SI ++PN+L I LKRF + G
Sbjct: 296 GS-SVQQCLERYVRAEQMSDENAYSCEKCKRKCQAVKKLSIHRAPNVLTISLKRFNNM-G 353
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
K+ K + + E + L ++M + + P YKL+ +VH GFS GHYY +IK G W+
Sbjct: 354 LKVTKEVQYSETMNLRAYMSQ--EGPPVIYKLYAVLVHQGFSCHGGHYYCFIKAPNGVWH 411
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIR 352
NDS V L VLS++ Y+LF+IR
Sbjct: 412 MMNDSLVRQVGLNTVLSQQAYLLFYIR 438
>gi|224089481|ref|XP_002308728.1| predicted protein [Populus trichocarpa]
gi|222854704|gb|EEE92251.1| predicted protein [Populus trichocarpa]
Length = 489
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 125/330 (37%), Positives = 173/330 (52%), Gaps = 26/330 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSC+ N VLQCLTYT PL + LK H + CK C C
Sbjct: 180 PCGLLNCGNSCFANVVLQCLTYTRPLVAYLLKKGHQTECKH-----------NDWCFLCE 228
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
+ + R+ L +P I S L + GRQEDAHEF+R ID + CL
Sbjct: 229 FQSHVERASQSTLPF-SPINIISRLPNIGGNLGYGRQEDAHEFMRLAIDTMQSVCL---- 283
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
GG E + +++++ IFGG LQSQV C C SN+ + +MD++++I
Sbjct: 284 ------DEFGGEKAVEPASQETTIIQHIFGGRLQSQVICTKCNKISNQFENMMDLTVEIH 337
Query: 206 -NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
++ SL+E + +F E L G N YKCD C V A K+++I ++PN+L I LKRF+
Sbjct: 338 GDAASLEECLDQFTDKEWLHGENMYKCDRCNDYVKAWKRLTIQRAPNVLTIALKRFQSGR 397
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYIKDAIG 322
GK++K + F E+L LS +M + D YKL+ +VH S GHY Y KD G
Sbjct: 398 FGKLNKRVTFPEMLDLSPYMSEGG-DGTDVYKLYAVVVHVDMLNASFFGHYICYTKDFHG 456
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
W+ +D VS L EVLS+ Y+L + R
Sbjct: 457 NWHRIDDCKVSSVELDEVLSQGAYMLVYSR 486
>gi|358422719|ref|XP_001252302.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 759
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 177/325 (54%), Gaps = 31/325 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CY+N+ LQCL++TPPLA++ + QH++LC + C C +
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPA-----------RSACTLCAMR 141
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R+L + P + L F H K EDAHEFL + ++A CL
Sbjct: 142 AHVTRALLHAGEVIRPR--EDLLAGFHRHQK----EDAHEFLMFTLNAVQQGCL------ 189
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S G E ++V+++IFGG +SQ++CL C + S+ D +DISLDI +
Sbjct: 190 ---SASQPSGHASED----TTVIRQIFGGTWRSQIQCLRCLSVSDTFDPYLDISLDITAA 242
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE LD +N Y C C + V A K++++ + +LV+ LKRF + G K
Sbjct: 243 QSVEQALRELVKPEKLDADNAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTLVSGAK 302
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ + + + L L + + P Y L+ +VHSG+S + GHY+ Y++ G+WY
Sbjct: 303 RAQEVRYPQCLDLQPYTSERKAGPL-GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKM 361
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ V+ LS+ Y+LF+ R
Sbjct: 362 DDAKVTACDETAALSQSAYVLFYAR 386
>gi|388580255|gb|EIM20571.1| cysteine proteinase [Wallemia sebi CBS 633.66]
Length = 515
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 120/328 (36%), Positives = 180/328 (54%), Gaps = 38/328 (11%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRNLGN+C+LNS LQCL +TP L NF L+ QH A+ + + FC++E
Sbjct: 117 GLRNLGNTCFLNSTLQCLLHTPSLMNF-LQSQH--------------AKGRSDNKFCMIE 161
Query: 88 KRIV---RSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-- 142
+ S APA + L+ A H GRQEDA EFLRY +DA + L
Sbjct: 162 ALRTCAKTTFSGSGGSFAPAPVVRNLKAIARHMTVGRQEDAQEFLRYAVDALQASYLSNY 221
Query: 143 LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISL 202
K ++ K + S+ + +IFGG L+S+V C S+ D +D+S+
Sbjct: 222 PKTVKEK--------------HSESNPIHKIFGGKLRSRVLCQNSKHASDTFDTFLDLSV 267
Query: 203 DILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEG 262
++ +++E+ + F + L+G NKYKC+NCKK V+A KQ ++ ++P L + LKRF
Sbjct: 268 NVKGCSNIQESFKSFTALDRLEGANKYKCENCKKPVAATKQFTVHEAPQCLTVHLKRFSP 327
Query: 263 IFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIG 322
+ G K++ +++F+E L + +M K Q P+ Y+L+G + H G S SGHY A++K G
Sbjct: 328 L-GQKLNGSLSFDENLDIQKYMSKGQQSPK--YRLYGVVSHYGGSARSGHYIAHVKAPNG 384
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFF 350
RWY ND VS S S+ Y+LF+
Sbjct: 385 RWYEMNDDLVSPSK-PPFGSKNAYVLFY 411
>gi|297273759|ref|XP_001108648.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Macaca
mulatta]
Length = 1122
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 178/344 (51%), Gaps = 26/344 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 123 GLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSF-----------CMLCVMQ 171
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
IV++ + P L+ A Y + H L L
Sbjct: 172 NHIVQAFANSGNAIKPVSFIRDLKNDGGVVGVVWILAATITRSYPQFSVHTEIPSLLVLD 231
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
R+ +++V +IFGG L+S+VKC C + S+ D +D++L+I +
Sbjct: 232 RQ--------------TQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQA 277
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
++ A++ F + +VL G N Y C CKK V A K+ +I ++ N+L + LKRF GGK
Sbjct: 278 ANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGK 337
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I K + + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 338 ITKDVGYPEFLNIRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQM 396
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 371
NDS V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 397 NDSLVHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGLISRTGSSS 440
>gi|119922836|ref|XP_001254468.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Bos taurus]
Length = 691
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 175/324 (54%), Gaps = 31/324 (9%)
Query: 29 LRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEK 88
L+NLGN+CY+N+ LQCL++TPPLA++ + QH++LC + C C +
Sbjct: 108 LQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPA-----------RSACTLCAMRA 156
Query: 89 RIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRR 148
+ R+L + P K L F H +QEDAHEFL + ++A CL
Sbjct: 157 HVTRALLHAGEVIRPRK--DLLAGFHRH----QQEDAHEFLMFTLNAMQQGCL------- 203
Query: 149 KGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSC 208
S G E ++V+++IFGG +SQ++CL C S+ D +DISLDI +
Sbjct: 204 --SASQPSGHASED----TTVIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQ 257
Query: 209 SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKI 268
S+++A+++ +PE LD +N Y C C + V A K++++ + +LV+ LKRF + G K
Sbjct: 258 SVEQALRELVKPEKLDADNAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAKR 317
Query: 269 DKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCN 328
+ + + L L + + P Y L+ +VHSG+S + GHY+ Y++ G+WY +
Sbjct: 318 AQEARYPQCLDLQPYTSERKAGPL-GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMD 376
Query: 329 DSYVSVSTLQEVLSEKVYILFFIR 352
D+ V+ LS+ Y+LF+ R
Sbjct: 377 DAKVTACDETAALSQSAYVLFYAR 400
>gi|119929778|ref|XP_001255627.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 533
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 31/325 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CY+N+ LQCL++TPPLA++ + QH++LC + C C +
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPA-----------RSACTLCAMR 141
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R+L + P K L F H +QEDAHEFL + ++A CL
Sbjct: 142 AHVTRALLHAGEVIRPRK--DLLAGFHRH----QQEDAHEFLMFTLNAMQQGCL------ 189
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S G E ++V+++IFGG +SQ++CL C S+ D +DISLDI +
Sbjct: 190 ---SASQPSGHASED----TTVIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAA 242
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE LD +N Y C C + V A K++++ + +LV+ LKRF + G K
Sbjct: 243 QSVEQALRELVKPEKLDADNAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAK 302
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ + + L L + + P Y L+ +VHSG+S + GHY+ Y++ G+WY
Sbjct: 303 RAQEARYPQCLDLQPYTSERKAGPL-GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKM 361
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ V+ LS+ Y+LF+ R
Sbjct: 362 DDAKVTACDETAALSQSAYVLFYAR 386
>gi|357451869|ref|XP_003596211.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355485259|gb|AES66462.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 983
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 137/379 (36%), Positives = 190/379 (50%), Gaps = 79/379 (20%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N+VLQCLT T PL + L HS C K C C
Sbjct: 463 PRGLLNCGNSCYANAVLQCLTSTKPLVVYLLYGSHSESCCA-----------KDWCLMCE 511
Query: 86 LEKR--IVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
LE+ I+R + L +P++I +R + G QEDAHEFLR ++ + + CL
Sbjct: 512 LEQHMMILREIGAPL---SPSRILWHMRSINCNMGDGSQEDAHEFLRLLVASMQSICLE- 567
Query: 144 KKLRRKGGGSSGGGGGGETIN---GGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDI 200
G GG ++ ++ ++ FGG LQS+VKCL C ES + + IMD+
Sbjct: 568 ------------GLGGERKVDPRLQETTFIQHTFGGRLQSKVKCLNCSHESERYENIMDL 615
Query: 201 SLDILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
+L+IL SL++A+ +F PE LDG N Y+C C V ARKQ+SI ++PNIL I LKR
Sbjct: 616 TLEILGWVESLEDALTQFTSPEDLDGENMYRCGRCTAYVRARKQLSIHEAPNILTIVLKR 675
Query: 260 F----------------------------EGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 291
F EG +G KI+K I F E+L + FM P
Sbjct: 676 FQIPNNVLNFIIFFILTLRNISCFVLCHQEGRYG-KINKCITFPEMLDMIPFMTGTGDIP 734
Query: 292 QPEYKLFGTIVH-----SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSV--------STLQ 338
P Y L+ +VH + FS GHY +Y+KD G W+ +D+ V + +
Sbjct: 735 -PLYVLYAVVVHLDTLNASFS---GHYVSYVKDLQGNWFRIDDTEVMLLPCLQVQPVLVN 790
Query: 339 EVLSEKVYILFFIRANQRP 357
+V+SE YILF+ R++ RP
Sbjct: 791 QVMSEGAYILFYTRSSPRP 809
>gi|11993477|gb|AAG42757.1|AF302666_1 ubiquitin-specific protease 16 [Arabidopsis thaliana]
Length = 1008
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 185/335 (55%), Gaps = 27/335 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N+GNSC+ N V QCL +TPPL + L+ HS C +K +C C
Sbjct: 541 PCGLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSRACT-----------KKEQCFTCG 589
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
EK +V++ L +P + S L+ G++EDAHEFLR+V+D + C++ +
Sbjct: 590 FEKLVVKAKEEKSPL-SPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASE 648
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
++++ FGG L+S++KC+ C +S +++MD++++I
Sbjct: 649 YDMTKSSKLED----------TTLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEID 698
Query: 206 NSCS-LKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
S L +A+++F + E+LDG NKY+C +CK A+K++ I + PN+L I LKRF+
Sbjct: 699 GDISTLDDALRRFTRTEILDGENKYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQAGK 758
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIG 322
GK++K I F E L L+ ++ S+ +YKL+G IVH + SGHY YI++
Sbjct: 759 FGKLNKLIRFPETLDLAPYVSGGSEKSH-DYKLYGVIVHLDVMNAAFSGHYVCYIRNQ-N 816
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
+WY +DS V S ++ +L++ Y+LF+ R P
Sbjct: 817 KWYKADDSTVVTSDVERILTKGAYMLFYARCTPTP 851
>gi|18416380|ref|NP_567705.1| ubiquitin carboxyl-terminal hydrolase 16 [Arabidopsis thaliana]
gi|75265551|sp|Q9SB51.1|UBP16_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 16; AltName:
Full=Deubiquitinating enzyme 16; Short=AtUBP16; AltName:
Full=Ubiquitin thioesterase 16; AltName:
Full=Ubiquitin-specific-processing protease 16
gi|4220534|emb|CAA23007.1| putative protein [Arabidopsis thaliana]
gi|7269306|emb|CAB79366.1| putative protein [Arabidopsis thaliana]
gi|332659526|gb|AEE84926.1| ubiquitin carboxyl-terminal hydrolase 16 [Arabidopsis thaliana]
Length = 1008
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 185/335 (55%), Gaps = 27/335 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N+GNSC+ N V QCL +TPPL + L+ HS C +K +C C
Sbjct: 541 PCGLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSRACT-----------KKEQCFTCG 589
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
EK +V++ L +P + S L+ G++EDAHEFLR+V+D + C++ +
Sbjct: 590 FEKLVVKAKEEKSPL-SPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASE 648
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
++++ FGG L+S++KC+ C +S +++MD++++I
Sbjct: 649 YDMTKSSKLED----------TTLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEID 698
Query: 206 NSCS-LKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
S L +A+++F + E+LDG NKY+C +CK A+K++ I + PN+L I LKRF+
Sbjct: 699 GDISTLDDALRRFTRTEILDGENKYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQAGK 758
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIG 322
GK++K I F E L L+ ++ S+ +YKL+G IVH + SGHY YI++
Sbjct: 759 FGKLNKLIRFPETLDLAPYVSGGSEKSH-DYKLYGVIVHLDVMNAAFSGHYVCYIRNQ-N 816
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
+WY +DS V S ++ +L++ Y+LF+ R P
Sbjct: 817 KWYKADDSTVVTSDVERILTKGAYMLFYARCTPTP 851
>gi|345781712|ref|XP_854129.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 179/325 (55%), Gaps = 30/325 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYT PLA++ L QH + C+ R+ C C L+
Sbjct: 81 GLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCR-----------RQTSCMLCTLQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R L P ++ L + F +QEDAHE+L +++DA CL KL
Sbjct: 130 AHLTRVLC------HPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKLS 183
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S++++++F G +SQ++CL C S+ ++ +DISLDI ++
Sbjct: 184 DPERPQD------------STLIQQLFEGYWRSQIQCLHCQGISSTLEPYLDISLDIGDA 231
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++ +PE+L+G N Y C C + V A K +++ SP +L++ L+RF + G K
Sbjct: 232 HSVSQALEQLVKPELLEGENAYHCRKCLEKVPASKVLTLHTSPKVLILVLRRFSDLTGNK 291
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + ++ + P Y L+ +VH+G S SGHY+ ++K G+WY
Sbjct: 292 MTKEVQYPERLDMQHYLSEQRAGPL-VYVLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKM 350
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ VS + L + Y+LF+++
Sbjct: 351 DDAKVSACDVTCALRQPAYVLFYMQ 375
>gi|71005508|ref|XP_757420.1| hypothetical protein UM01273.1 [Ustilago maydis 521]
gi|46096903|gb|EAK82136.1| hypothetical protein UM01273.1 [Ustilago maydis 521]
Length = 756
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 121/330 (36%), Positives = 179/330 (54%), Gaps = 26/330 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTG--DSALDAERKRECPFCI 85
GL N GN+CY+NSV+Q L +TPPLA L +L +L G + A DA
Sbjct: 201 GLSNYGNTCYMNSVMQSLIHTPPLAFALLTQDLDALHGELGGKPNVAFDA-------VAA 253
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL-RLK 144
++ SL +AP L+ FA + GRQEDAHE+LR++++A CL R
Sbjct: 254 MQTFAKGSLMGSKPTNAPRDFNRNLKAFARPLRQGRQEDAHEYLRFLLEALQQGCLSRAS 313
Query: 145 KLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI 204
K + + I +S V++IFGG L+S+V C CG S+ D MD+SLD+
Sbjct: 314 KSLKPD----------DPIRA-TSFVQKIFGGKLRSRVTCHKCGHNSDTFDPFMDLSLDV 362
Query: 205 LNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI 263
SL +A + F + L G+ KYKCD CK+ V A KQ +I +P L + LKRF
Sbjct: 363 RKGINSLTDAFRAFVAKDQLTGSEKYKCDKCKRKVDATKQFTIETAPPALTVHLKRFS-P 421
Query: 264 FGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR 323
FGGKI + +AF+E L ++ ++ + P YKL+ + H G P+SGHY A ++ G+
Sbjct: 422 FGGKISRQVAFDEKLNIAPYLS-VNHGPV-RYKLYAVVHHYGSGPNSGHYVASVRSPFGK 479
Query: 324 WYCCNDSYVS-VSTLQEVLSEKVYILFFIR 352
W +DS+VS + + + + YILF+++
Sbjct: 480 WTRMDDSHVSEMGSSGPLGDQSAYILFYLK 509
>gi|291411127|ref|XP_002721844.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 530
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/442 (29%), Positives = 215/442 (48%), Gaps = 45/442 (10%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N GN+CYLN+ LQCLTYTPPLAN+ L HS C+ R C C +E
Sbjct: 83 GLQNTGNTCYLNAALQCLTYTPPLANYMLSQVHSQSCR-----------RSDRCILCAVE 131
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ +L +P + ++ A F RQEDAHEFL + +D L
Sbjct: 132 THFLWAL------HSPGDVIQPCQVLAAGFHTNRQEDAHEFLMFALDVLKAVGLP----- 180
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + G G E S ++I GG +SQ++CL C S +D ++I+LDI +
Sbjct: 181 ----GLTDGVGPQED----QSPSQQIVGGHWRSQIQCLQCQGISETLDPYLEIALDIKTA 232
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+Q QPE L G N Y C C + +A K +++ + +L+ LKRF G K
Sbjct: 233 DSVEQALQHLVQPEELAGENAYHCATCLQKTAASKTLTLQSAGKVLLFVLKRFSEFTGEK 292
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ + + E L + +M + + P +Y L+ +VH G SGHY+ Y+K G WY
Sbjct: 293 LGGQVHYPECLDMRPYMSQQNGRPL-DYVLYAVLVHVGLRCQSGHYFCYVKAGNGHWYKM 351
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKSHENGKEAYKGVKGTV- 386
+D+ V+ VL++ Y+LF++R + +GT ++ S + G +
Sbjct: 352 DDAKVTACDTTCVLNQSAYVLFYVRKSGV-GGEHGTVSAGRGPSDLEAANTHGHTPGELE 410
Query: 387 ---PLKAVATKPSAEQSSRKTPSTISKVEKVPSNPRLKFSISGSSGCKGVPPT-SNGKVN 442
PL+A ++ EQ+++ + + + PR FS+ + V PT + +
Sbjct: 411 RPSPLEAGESEEHLEQTTQDLTLDAWQALQAQNTPRSAFSL------RTVEPTLPSNAIV 464
Query: 443 VHKSQSVKMNGVVKDSVPKEKS 464
+H+++S G+ K +E++
Sbjct: 465 IHQARSAA--GMRKHHPDQERA 484
>gi|194680862|ref|XP_001255688.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 575
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 179/325 (55%), Gaps = 31/325 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CY+N+ LQCL++TPPLA++ + QH++LC + C C +
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPA-----------RSACTLCAMR 141
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R+L L A I+ + A F ++EDAHEFL + ++A CL
Sbjct: 142 AHVTRAL-----LHAGEVIRPREDLLAG-FHRHQKEDAHEFLMFTLNAVQQGCL------ 189
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S G E ++V+++IFGG +SQ++CL C + S+ D +DISLDI +
Sbjct: 190 ---SASQPSGHASED----TTVIRQIFGGTWRSQIQCLRCLSVSDTFDPYLDISLDITAA 242
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE LD +N Y C C + V A K++++ + +LV+ LKRF + G K
Sbjct: 243 QSVEQALRELVKPEKLDADNAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAK 302
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ + + + L L + + P Y L+ +VHSG+S + GHY+ Y++ G+WY
Sbjct: 303 RAQEVRYPQCLDLQPYTSERKAGPL-GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKM 361
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ V+ LS+ Y+LF+ R
Sbjct: 362 DDAKVTACDETAALSQSAYVLFYAR 386
>gi|168037578|ref|XP_001771280.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677369|gb|EDQ63840.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 336
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/333 (36%), Positives = 183/333 (54%), Gaps = 28/333 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSC++N+VLQC TYT PL + L H CK ++ C C
Sbjct: 22 PCGLLNCGNSCFVNAVLQCFTYTQPLVAYLLSGDHGRKCK---------CKKTDWCFICA 72
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
L++ V+ + + +P+ I S LR A G QEDAHEF+ I + CL
Sbjct: 73 LQEHAVK-VKQRIPF-SPSGILSHLRSIARGLNYGNQEDAHEFMSSAIHLMQSICL---- 126
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
+GG G ++ ++ IFGG LQSQVKC C +SN+ + +MD++++I
Sbjct: 127 ------DEAGGEKGVDSCTQQTTFTHHIFGGLLQSQVKCNQCHLQSNRYEVMMDLAVEIP 180
Query: 206 -NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
N SL++A+ F PE+LDG NKYKC+ C V A KQ+++ ++PNILV+ LKRF+ +
Sbjct: 181 GNVRSLEDALGVFTAPEILDGENKYKCNRCDAYVDAYKQLTVHEAPNILVVTLKRFKSLQ 240
Query: 265 G---GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFS--PDSGHYYAYIKD 319
G GK+ +AF EVL + +M ++ P Y L+ +VH+ S +GHY+ +K+
Sbjct: 241 GGRYGKLTNYVAFPEVLDMGPYM-SGNRGLTPVYNLYAVVVHASVSNAAHNGHYFCLVKN 299
Query: 320 AIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
G WY +D+ V+ + V S++ YIL + R
Sbjct: 300 PNGYWYRADDAKVTEVGVDWVTSQEAYILLYKR 332
>gi|51971603|dbj|BAD44466.1| unknown protein [Arabidopsis thaliana]
Length = 631
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 180/342 (52%), Gaps = 34/342 (9%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSC+ N +LQCL++T PL + L+ H C R C C
Sbjct: 167 PCGLMNCGNSCFANVILQCLSWTRPLVAYLLEKGHKRECM-----------RNDWCFLCE 215
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
+ + R+ +P I S L GRQEDAHEF+RY ID + CL
Sbjct: 216 FQTHVERASQSRFPF-SPMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCL---- 270
Query: 146 LRRKGGGSSGGGGGGETI----NGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDIS 201
GGE I + +++++ IFGG LQSQV+C C S++ + +MD+
Sbjct: 271 ----------DEFGGEKIVPPRSQETTLIQYIFGGLLQSQVQCTVCNHVSDQYENMMDLI 320
Query: 202 LDIL-NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF 260
+++ ++ SL+E + +F E L G+N YKCD C V A K+++I ++PNIL I LKR+
Sbjct: 321 VEMHGDAGSLEECLDQFTAEEWLHGDNMYKCDRCSDYVKACKRLTIRRAPNILTIALKRY 380
Query: 261 EGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYIK 318
+G GK++K I+F E L L+ +M + D YKL+ IVH S GHY YIK
Sbjct: 381 QGGRYGKLNKRISFPETLDLNPYMSEGG-DGSDVYKLYAVIVHLDMLNASFFGHYICYIK 439
Query: 319 DAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSA 360
D G WY +DS + L++VLS++ Y+L + R R S+
Sbjct: 440 DFCGNWYRIDDSEIESVELEDVLSQRAYMLLYSRIQARSSSS 481
>gi|15236036|ref|NP_194895.1| ubiquitin carboxyl-terminal hydrolase 18 [Arabidopsis thaliana]
gi|166201351|sp|Q67XW5.2|UBP18_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 18; AltName:
Full=Deubiquitinating enzyme 18; Short=AtUBP18; AltName:
Full=Ubiquitin thioesterase 18; AltName:
Full=Ubiquitin-specific-processing protease 18
gi|3281861|emb|CAA19756.1| putative protein [Arabidopsis thaliana]
gi|7270070|emb|CAB79885.1| putative protein [Arabidopsis thaliana]
gi|23296513|gb|AAN13075.1| unknown protein [Arabidopsis thaliana]
gi|332660543|gb|AEE85943.1| ubiquitin carboxyl-terminal hydrolase 18 [Arabidopsis thaliana]
Length = 631
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 180/342 (52%), Gaps = 34/342 (9%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSC+ N +LQCL++T PL + L+ H C R C C
Sbjct: 167 PCGLMNCGNSCFANVILQCLSWTRPLVAYLLEKGHKRECM-----------RNDWCFLCE 215
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
+ + R+ +P I S L GRQEDAHEF+RY ID + CL
Sbjct: 216 FQTHVERASQSRFPF-SPMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCL---- 270
Query: 146 LRRKGGGSSGGGGGGETI----NGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDIS 201
GGE I + +++++ IFGG LQSQV+C C S++ + +MD+
Sbjct: 271 ----------DEFGGEKIVPPRSQETTLIQYIFGGLLQSQVQCTVCNHVSDQYENMMDLI 320
Query: 202 LDIL-NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF 260
+++ ++ SL+E + +F E L G+N YKCD C V A K+++I ++PNIL I LKR+
Sbjct: 321 VEMHGDAGSLEECLDQFTAEEWLHGDNMYKCDRCSDYVKACKRLTIRRAPNILTIALKRY 380
Query: 261 EGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYIK 318
+G GK++K I+F E L L+ +M + D YKL+ IVH S GHY YIK
Sbjct: 381 QGGRYGKLNKRISFPETLDLNPYMSEGG-DGSDVYKLYAVIVHLDMLNASFFGHYICYIK 439
Query: 319 DAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSA 360
D G WY +DS + L++VLS++ Y+L + R R S+
Sbjct: 440 DFCGNWYRIDDSEIESVELEDVLSQRAYMLLYSRIQARSSSS 481
>gi|297798806|ref|XP_002867287.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297313123|gb|EFH43546.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 618
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 179/342 (52%), Gaps = 34/342 (9%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSC+ N +LQCL++T PL + L+ H C C FC
Sbjct: 167 PCGLMNCGNSCFANVILQCLSWTRPLVAYLLEKGHKRECMH-----------NDWCFFCE 215
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
+ + R+ +P I S L GRQEDAHEF+RY ID + CL
Sbjct: 216 FQTHVERASQSRFPF-SPMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCLE--- 271
Query: 146 LRRKGGGSSGGGGGGETI----NGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDIS 201
GGE I + +++++ IFGG LQSQV+C C S++ + +MD+
Sbjct: 272 -----------EFGGEKIVPPRSQETTLIQYIFGGLLQSQVQCTVCNHVSDQYENMMDLI 320
Query: 202 LDIL-NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF 260
+++ ++ SL+E + +F E L G+N YKCD C V A K+++I ++PNIL I LKR+
Sbjct: 321 VEMHGDAVSLEECLDQFTAEEWLHGDNMYKCDRCSDYVKACKRLTIWRAPNILTIALKRY 380
Query: 261 EGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYIK 318
+G GK++K I+F L L+ +M + D YKL+ IVH S GHY YIK
Sbjct: 381 QGGRYGKLNKRISFPATLDLNPYMSEGG-DGSDVYKLYAVIVHLDMLNASFFGHYICYIK 439
Query: 319 DAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSA 360
D G WY +DS + L++VLS++ Y+L + R R S+
Sbjct: 440 DFCGNWYRIDDSEIESVELEDVLSQRAYMLLYSRIQARSSSS 481
>gi|145351758|ref|XP_001420231.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580465|gb|ABO98524.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 316
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 189/334 (56%), Gaps = 30/334 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNSVLQCLT+TP LANF L+ +H K TG S +A + +
Sbjct: 3 GLANLGNTCFLNSVLQCLTHTPALANFALRGEHK---KYKTGGS-FNALYE-------IG 51
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ + R+L+ AP + LR ++ F+ GRQEDAHE R ++DA H C+ + K +
Sbjct: 52 EHVARALNSSGRTIAPTALVKNLRALSKTFRKGRQEDAHELARCLLDAMHKKCVEVVKPK 111
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S ET S V ++FGG L+SQV C CG S D +D+SL++ +
Sbjct: 112 -----ISPNSARAET-----SFVWKVFGGRLRSQVNCKTCGRNSETFDPFLDLSLEVGRA 161
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCD----NCK-KLVSARKQMSILQSPNILVIQLKRFEG 262
S+ A + F EVLDG+NKY+C+ N K L A KQ ++ Q+PN+L +QLKRF
Sbjct: 162 KSVLGAFKMFTHTEVLDGDNKYRCEGKSANSKSHLTKASKQFTVNQAPNVLALQLKRFAY 221
Query: 263 I-FG-GKIDKAIAFEEVLVLSSFMCKA--SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIK 318
+ FG GK++ + + L ++ + + + Y L+G +VH+G S +SGHYY ++K
Sbjct: 222 VPFGRGKLNHFVEYPLELDITPYTSDEGLTSRGKAVYDLYGVLVHAGNSSNSGHYYCFVK 281
Query: 319 DAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
A G W +D ++ + + VL ++ Y+LF+ R
Sbjct: 282 VATGTWCLMDDDEITSVSEKVVLKQQAYLLFYAR 315
>gi|444520452|gb|ELV13004.1| Ubiquitin carboxyl-terminal hydrolase 17-like protein 2 [Tupaia
chinensis]
Length = 442
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 171/324 (52%), Gaps = 31/324 (9%)
Query: 32 LGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIV 91
+GN+CY+N+ LQCLTYTPP+AN+ L +HS C + C CI++ I
Sbjct: 1 MGNTCYMNAALQCLTYTPPIANYMLSQEHSQTC-----------HHQGFCMLCIMQAHIT 49
Query: 92 RSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGG 151
L P I A F QEDAHEFL + ++A L
Sbjct: 50 ------WVLQHPGSIIQPSYALAASFHRNEQEDAHEFLMFTLEAMQEASL---------- 93
Query: 152 GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLK 211
G + + S++++ IFGG +SQ+KCL C + S+ D +DISLDI + S+
Sbjct: 94 ---SGQKHFDHPSEDSTLIRAIFGGYWRSQIKCLHCHSVSDTFDPYLDISLDIKTAQSVS 150
Query: 212 EAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKA 271
+A+++ +PE LDG N Y C C + A K +++ S +L++ LKRF G K KA
Sbjct: 151 QALEELVKPEELDGENAYHCSVCLERRLASKTLTLHASSKVLILVLKRFSDFTGEKTTKA 210
Query: 272 IAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSY 331
+ + E L + ++ + ++ P Y L+ +VH+G S +GHY+ YIK G+WY +D+
Sbjct: 211 VQYPECLDMQTYTSEQNRGPLI-YGLYAVLVHAGSSCHNGHYFCYIKAGNGQWYKMDDAE 269
Query: 332 VSVSTLQEVLSEKVYILFFIRANQ 355
V+ + VLS+ Y+LF+++ N+
Sbjct: 270 VTACDVTVVLSQPAYVLFYVQKNE 293
>gi|302772254|ref|XP_002969545.1| hypothetical protein SELMODRAFT_91996 [Selaginella moellendorffii]
gi|300163021|gb|EFJ29633.1| hypothetical protein SELMODRAFT_91996 [Selaginella moellendorffii]
Length = 374
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 168/311 (54%), Gaps = 26/311 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSCY N VLQCL T PLA + L H C ER+ C C
Sbjct: 82 PCGLINCGNSCYANVVLQCLASTRPLAAYLLHGMHQEAC-----------EREGWCFMCE 130
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
LE + ++ + + +P KI S LR GRQEDAHEF+R +D CL
Sbjct: 131 LEDHVQKAFNNQMPF-SPIKILSRLRSIGNSLGYGRQEDAHEFMRLAVDCMQKICL---- 185
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
+GG + +++++ IFGG LQSQV C C SN + ++D+S+ I
Sbjct: 186 ------DEAGGETTLDARTQETTLIQHIFGGYLQSQVVCCQCQQRSNLYENMLDLSVGIQ 239
Query: 206 -NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
N SL++A+++F PE LDG+NKY+CD C V A+K++S+ ++PNIL I LKRF+G
Sbjct: 240 GNVESLEDALKQFTSPEWLDGDNKYRCDRCNAYVRAKKRLSVHEAPNILTIALKRFQGGK 299
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYIKDAIG 322
GKI+K + F E L + +M + D P Y+L+ +VH S GHY Y++ G
Sbjct: 300 FGKINKKVTFPEELDMVPYM-SGTVDTPPAYELYAVVVHVDMLNASYFGHYVCYVRAGNG 358
Query: 323 RWYCCNDSYVS 333
W+ +DS VS
Sbjct: 359 AWFKVDDSKVS 369
>gi|449019625|dbj|BAM83027.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 500
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/332 (34%), Positives = 171/332 (51%), Gaps = 11/332 (3%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSAL-DAERKRECPFCI 85
GLRNLGN+CY N+V+Q L +TPPL L S C T + DA F
Sbjct: 131 FGLRNLGNTCYANAVIQALLHTPPLVLKAL----SDGCASATPHTGFFDAM----AAFVR 182
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
L ++++ AP +I L ++ GRQEDAHEFLR+++++ +C R +
Sbjct: 183 LCRQLLVVRPSGTNAVAPTEIIRNLPAICRRYRVGRQEDAHEFLRFLLESIARSCSRRGE 242
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
R S N G+ + IFGG L+S+V C C +S + + +D+SLD
Sbjct: 243 RRLPSQQVSSDELVASDCNHGTGWITRIFGGLLRSRVICRTCQHKSYRTERFLDLSLDFR 302
Query: 206 NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFG 265
S S+ + ++ F E+L G N+Y C C A KQ+ I Q+P +L + LKRF +
Sbjct: 303 QSASISKCLEHFAATELLAGRNRYDCAACHGYSDAEKQIRIRQAPVVLTLHLKRFHAL-- 360
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
K+ + F E L L +M + Y+LF IVH G S SGHYYA+++ A G W
Sbjct: 361 RKLSGVVRFSEWLDLRPYMAEEFVAGPVMYRLFAVIVHEGHSLSSGHYYAFVRSASGAWL 420
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
C+D ++S + V +++ Y+LF++R + P
Sbjct: 421 RCDDEHLSRVGIGSVFAQQAYLLFYLRVDAVP 452
>gi|119929524|ref|XP_001251224.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 490
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 175/324 (54%), Gaps = 31/324 (9%)
Query: 29 LRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEK 88
L+NLGN+CY+N+ LQCL++TPPLA++ + QH++LC + C C +
Sbjct: 51 LQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPA-----------RSACTLCAMRA 99
Query: 89 RIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRR 148
+ R+L + P K L F H +QEDAHEFL + ++A CL
Sbjct: 100 HVTRALLHAGEVIRPRK--DLLAGFHRH----QQEDAHEFLMFTLNAMQQGCL------- 146
Query: 149 KGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSC 208
S G E ++V+++IFGG +SQ++CL C S+ D +DISLDI +
Sbjct: 147 --SASQPSGHASED----TTVIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQ 200
Query: 209 SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKI 268
S+++A+++ +PE LD +N Y C C + V A K++++ + +LV+ LKRF + G K
Sbjct: 201 SVEQALRELVKPEKLDADNAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAKR 260
Query: 269 DKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCN 328
+ + + L L + + P Y L+ +VHSG+S + GHY+ Y++ G+WY +
Sbjct: 261 AQEARYPQCLDLQPYTSERKAGPL-GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMD 319
Query: 329 DSYVSVSTLQEVLSEKVYILFFIR 352
D+ V+ LS+ Y+LF+ R
Sbjct: 320 DAKVTACDETAALSQSAYVLFYAR 343
>gi|388851883|emb|CCF54477.1| related to ubiquitin carboxyl-terminal hydrolase 36 [Ustilago
hordei]
Length = 749
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 121/338 (35%), Positives = 180/338 (53%), Gaps = 38/338 (11%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N GN+CY+NSV+Q L +TPPLA L +L + G ++ + ++
Sbjct: 203 GLSNYGNTCYMNSVMQSLIHTPPLAFALLTQDLETLHGEWGGKPNVNFDA-----VIAMQ 257
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL-RLKK- 145
RSL +AP + L+ FA+ + GRQEDAHE+LR++++A CL R K
Sbjct: 258 NFAKRSLQGTRPTNAPQEFNRNLKAFAKPLRQGRQEDAHEYLRFLLEALQQACLSRAPKS 317
Query: 146 ------LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMD 199
+RR ++ V+++FGG L+S+V C C S+ D MD
Sbjct: 318 LKPDDPIRR------------------TTFVQKMFGGKLRSRVTCHNCSHNSDTFDPFMD 359
Query: 200 ISLDILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLK 258
+SLD+ SL +A + F + L G+ KYKCD CK+ V A KQ +I P L + LK
Sbjct: 360 LSLDVRKGINSLTDAFRAFVAKDHLTGSEKYKCDKCKRKVDATKQFTIESCPPALTVHLK 419
Query: 259 RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP-EYKLFGTIVHSGFSPDSGHYYAYI 317
RF FGGKI + I+F+E L ++ ++ S++ P YKL+ + H G P+SGHY A +
Sbjct: 420 RFTA-FGGKISRQISFDESLNIAPYL---SENRGPVRYKLYAAVHHYGSGPNSGHYVASV 475
Query: 318 KDAIGRWYCCNDSYVS-VSTLQEVLSEKVYILFFIRAN 354
K G+W +DS+VS + V + YILF++R N
Sbjct: 476 KAPCGKWTRMDDSHVSEIGRGGPVNDQSAYILFYLREN 513
>gi|297799550|ref|XP_002867659.1| ubiquitin-specific protease 16 [Arabidopsis lyrata subsp. lyrata]
gi|297313495|gb|EFH43918.1| ubiquitin-specific protease 16 [Arabidopsis lyrata subsp. lyrata]
Length = 1007
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 112/335 (33%), Positives = 185/335 (55%), Gaps = 27/335 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N+GNSC+ N V QCL +TPPL + L+ HS C +K +C C
Sbjct: 539 PCGLINVGNSCFANVVFQCLMFTPPLTTYFLQQLHSRACT-----------KKEQCFTCG 587
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
EK ++++ L +P + S L+ G++EDAHEFLR+V+D + C++ +
Sbjct: 588 FEKLVLKAKEGKSPL-SPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASE 646
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
++++ FGG L+S++KC+ C +S +++MD++++I
Sbjct: 647 YDMPKSSKLED----------TTLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEID 696
Query: 206 NSCS-LKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
S L +A+++F + E+LDG+NKY+C +CK A+K++ I PN+L I LKRF+
Sbjct: 697 GDISTLDDALRRFTRTEILDGDNKYRCGSCKSYERAKKKLKITDPPNVLTIALKRFQAGK 756
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIG 322
GK++K I F E L L+ ++ S+ +YKL+G IVH + SGHY YI++
Sbjct: 757 FGKLNKLIRFPETLDLAPYVSGGSEKSH-DYKLYGVIVHLDIMNAAFSGHYVCYIRNQ-N 814
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
+WY +DS V S ++ ++++ Y+LF+ R P
Sbjct: 815 KWYKADDSTVVTSDVERIMTKGAYMLFYARCTPMP 849
>gi|426259087|ref|XP_004023133.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Ovis aries]
Length = 533
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 176/325 (54%), Gaps = 31/325 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CY+N+ LQCL++TPPLA++ + QH++LC G S C C +
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWLVSRQHATLCP--AGGS---------CTLCAMR 141
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R+L L A I+ + A F +QEDAHEFL + + CL
Sbjct: 142 AHVTRAL-----LHAGEVIRPHRDLLAG-FHRHQQEDAHEFLMFTLSGMQQGCL------ 189
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S G E +SVV++IFGG +SQ++CL C S+ D +DISLDI +
Sbjct: 190 ---SASQPSGHASED----TSVVRQIFGGTWRSQIQCLHCLGVSDTFDPYLDISLDITAA 242
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+++A+++ +PE L+ N Y C C + V A K++++ + +LV+ LKRF + G K
Sbjct: 243 QSVEQALRELVKPEKLEAENAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTQLSGAK 302
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ + + + L + + + P Y L+ +VHSG+S + GHY+ Y++ G+WY
Sbjct: 303 RAQEVRYPQCLDVQPYTSERKAGPL-GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKM 361
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ V+ LS+ YILF+ R
Sbjct: 362 DDAKVTACDETAALSQSAYILFYAR 386
>gi|345806352|ref|XP_851787.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 178/326 (54%), Gaps = 32/326 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYT PLA++ L QH + C+ R+ C C L+
Sbjct: 81 GLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCR-----------RQTSCMLCTLQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R L P ++ L + F +QEDAHE+L +++DA CL KL
Sbjct: 130 AHLTRVLC------HPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKL- 182
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S++++++FGG +SQ++CL C S+ ++ +DISLDI +
Sbjct: 183 -----------SDPECPQDSTLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGAA 231
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++ +PE+L+G N Y C C + V A K +++ SP +L++ L+RF + G K
Sbjct: 232 HSVSQALEQLVKPELLEGENAYHCSKCLEKVPASKVLTLHTSPKVLILVLRRFSDLTGNK 291
Query: 268 IDKAIAFEEVLVLSSFMCKASQDP-QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
+ K + + E L + C + Q Y L+ +VH+G S SGHY+ ++K G+WY
Sbjct: 292 MTKEVRYPERLDMQH--CLSEQRAGLLVYVLYAVLVHAGRSCHSGHYFCFVKAGNGQWYK 349
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ VS + L + YILF+++
Sbjct: 350 MDDAKVSACDVTCALHQPAYILFYMQ 375
>gi|51969076|dbj|BAD43230.1| unknown protein [Arabidopsis thaliana]
Length = 631
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 179/342 (52%), Gaps = 34/342 (9%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSC+ N +LQCL++T PL + L+ H C R C C
Sbjct: 167 PCGLMNCGNSCFANVILQCLSWTRPLVAYLLEKGHKRECM-----------RNDWCFLCE 215
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
+ + R+ +P I S L GRQEDAHEF+RY ID + CL
Sbjct: 216 FQTHVERASQSRFPF-SPMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCL---- 270
Query: 146 LRRKGGGSSGGGGGGETI----NGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDIS 201
GGE I + +++++ IFGG LQSQV+C C S++ + +MD+
Sbjct: 271 ----------DEFGGEKIVPPRSQETTLIQYIFGGLLQSQVQCTVCNHVSDQYENMMDLI 320
Query: 202 LDIL-NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF 260
+++ ++ SL+E + +F E L G+N YKCD C V A K+++I ++PNIL I LKR+
Sbjct: 321 VEMHGDAGSLEECLDQFTAEEWLHGDNMYKCDRCSDYVKACKRLTIRRAPNILTIALKRY 380
Query: 261 EGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYIK 318
+G GK++K I+F E L L+ +M + D YKL+ IVH S HY YIK
Sbjct: 381 QGGRYGKLNKRISFPETLDLNPYMSEGG-DGSDVYKLYAVIVHLDMLNASFFSHYICYIK 439
Query: 319 DAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSA 360
D G WY +DS + L++VLS++ Y+L + R R S+
Sbjct: 440 DFCGNWYRIDDSEIESVELEDVLSQRAYMLLYSRIQARSSSS 481
>gi|343427156|emb|CBQ70684.1| related to ubiquitin carboxyl-terminal hydrolase 36 [Sporisorium
reilianum SRZ2]
Length = 761
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 118/337 (35%), Positives = 181/337 (53%), Gaps = 40/337 (11%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTG--DSALDAERKRECPFCI 85
GL N GN+CY+NSV+Q L +TPPLA L +L +L G ++ DA
Sbjct: 199 GLANYGNTCYMNSVMQSLIHTPPLAFALLTQDLDALHGELGGKPNATFDA-------VTA 251
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL-RLK 144
+ SL +AP + L+ FA+ + GRQEDAHE+LR++++A +CL R
Sbjct: 252 MHAFTRASLMGSKPTNAPKEFNRNLKAFAKPLRQGRQEDAHEYLRFLLEALQQSCLARAS 311
Query: 145 K-------LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEI 197
K +RR ++ V+++FGG L+S+V C +CG S+ D
Sbjct: 312 KSLKPDDPIRR------------------TTFVQKMFGGKLRSRVTCHSCGHNSDTFDPF 353
Query: 198 MDISLDILNS-CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQ 256
MD+SL++ SL +A + F + L G+ KYKCD CK+ V A KQ +I +P L +
Sbjct: 354 MDLSLEVRKGITSLTDAFRAFVAKDHLTGSEKYKCDKCKRKVDATKQFTIEAAPPALTVH 413
Query: 257 LKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAY 316
LKRF FGGK+ + I F+E L ++ ++ ++ P YKL+ + H G P+SGHY A
Sbjct: 414 LKRFTA-FGGKVSRQINFDESLNIAPYLS-VNRGPA-RYKLYAVVHHYGSGPNSGHYVAS 470
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEK-VYILFFIR 352
++ G+W +DS VS L+++ YILF+++
Sbjct: 471 VRSPSGKWTRMDDSLVSEMGRSGPLNDQSAYILFYMK 507
>gi|340508861|gb|EGR34476.1| hypothetical protein IMG5_010250 [Ichthyophthirius multifiliis]
Length = 347
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 116/337 (34%), Positives = 186/337 (55%), Gaps = 43/337 (12%)
Query: 18 EKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAER 77
E + GP GLRNLGN+C++NSVLQC+T+TP L N+ L S L A +
Sbjct: 18 ENLYKIGP--GLRNLGNTCFMNSVLQCITHTPLLVNYLL--------------SNLHACQ 61
Query: 78 KRECPFCILEKRIVRSLSVDLT-LDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDAC 136
K++C C+++K + + S + + AP++I + ++ ++F+ G+Q D+HEFLR++++A
Sbjct: 62 KKQCIICVVQKHVKQCFSNNSNNIIAPSEIINNMKYINKNFRLGKQHDSHEFLRFLLEAM 121
Query: 137 HNT-CLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVD 195
+ + +KK + I + + IFGG L SQ++C +C S ++
Sbjct: 122 QKSYFIDIKK---------------QKILEEQTPIFNIFGGKLISQIQCFSCKQISQNIE 166
Query: 196 EIMDISLDILNSC--SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
D+ L+ C ++ ++ + FF+ E+L GNNKY+C CK LV K I + PNIL
Sbjct: 167 TFYDLLLE----CKQNIDQSFESFFKKEILSGNNKYRCSFCKNLVDCSKGYVIQKFPNIL 222
Query: 254 VIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHY 313
IQLKRF F K++K F + L + ++ Y L+G ++H G + GHY
Sbjct: 223 TIQLKRFNN-FMMKVNKHTQFAPTINLKKY---STNQKDQIYDLYGILIHVGHDLNYGHY 278
Query: 314 YAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
Y Y K +WYC NDS V+ + QEV +EK ++LF+
Sbjct: 279 YCYTKSPNKQWYCMNDSSVNQVSFQEVQNEKAFLLFY 315
>gi|422295802|gb|EKU23101.1| hypothetical protein NGA_0518320 [Nannochloropsis gaditana CCMP526]
Length = 526
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 194/376 (51%), Gaps = 47/376 (12%)
Query: 12 QPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGD 70
P + + +R GP GL NLGN+C+LN+ LQCL Y PPLA + L K + + L+
Sbjct: 123 HPLMTWIRVERVGP--GLYNLGNTCFLNATLQCLAYLPPLAQYFLSKKEEERVPSVLSPG 180
Query: 71 SALDAERKRECPFCILEKRIVRSLSVDLTLD----------------------APAKIQS 108
+ + L +VR L ++ +P I
Sbjct: 181 AGQGHRGGGQARGGWLG--LVRDLIANMHTGSGAGGGDRGDGLARREGGRSPISPKAIVG 238
Query: 109 CLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSS 168
L+ HF+ GRQEDAHEFLR+++DA + CL+ +++ S+ G ET +
Sbjct: 239 NLKALNRHFRVGRQEDAHEFLRHLLDALQSGCLQAARVK-----SNAPGRLAET-----T 288
Query: 169 VVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCS-LKEAMQKFFQPEVLDGNN 227
V IFGG L+SQV+C CG SN D +D+SL+I L+EA+ +F E LD N
Sbjct: 289 FVHRIFGGYLRSQVRCTQCGHCSNTYDNFLDLSLEIHGKVGRLEEALARFTAVETLDRAN 348
Query: 228 KYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFM 284
+++C C +LV A+K++S +PN+ +QLKRF +FG K+ K +A+ E L LS
Sbjct: 349 RWRCPACSQLVCAQKRLSFHTAPNVCTVQLKRF--MFGSRSSKLSKNVAYPESLRLSL-- 404
Query: 285 CKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK 344
+ + Y+L G +VH+G S + GHYY+ +K A G WY +D+ V L VL +
Sbjct: 405 --SGPEGSARYRLAGVLVHAGASVNMGHYYSLVKAANGCWYEMDDAQVRQVGLPTVLHQH 462
Query: 345 VYILFFIRANQRPVSA 360
Y+LF+++ P A
Sbjct: 463 AYLLFYVKVGPSPPPA 478
>gi|335302607|ref|XP_003359505.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Sus scrofa]
Length = 517
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 184/363 (50%), Gaps = 51/363 (14%)
Query: 9 MSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLT 68
+SW+PS++ GL+NLGN+CY+N+VLQCLT+TPPLA L QH C
Sbjct: 71 LSWRPSVVGA---------GLQNLGNTCYVNAVLQCLTHTPPLAISLLNGQHQRAC---- 117
Query: 69 GDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEF 128
+++ C C + + R+L P + + F RQEDAHEF
Sbjct: 118 -------QKQPFCMLCAVRAHVTRALL------HPGDVIQPRKDLVASFHRHRQEDAHEF 164
Query: 129 LRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L + +DA + +++++IFGG +SQ++CL C
Sbjct: 165 LMFALDAM------------------------QRCPSEDTLIQQIFGGCWRSQIQCLRCL 200
Query: 189 AESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQ 248
S+ D +D++LDI + S+++A+++ + E LDG N Y C C + A K++++ +
Sbjct: 201 GVSDTFDPYLDVTLDITAAQSVEQALRELVKAEKLDGENAYHCGVCLRKGPATKRLTLHR 260
Query: 249 SPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSP 308
+ +L++ LKRF + G K+DK + + E L L ++ + +Y+LF +VHSG++
Sbjct: 261 ASKVLILVLKRFTDVTGDKMDKKVRYPEHLDLQPYL-SVQKAGALDYELFAVLVHSGWTC 319
Query: 309 DSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNG 368
GHY+ YI+ G WY +DS V+ LS+ Y+LF+I+ + + G A
Sbjct: 320 HQGHYFCYIRAGNGWWYRMDDSKVTACDTASALSQSAYVLFYIQRGELERATGGASADRA 379
Query: 369 VKS 371
+S
Sbjct: 380 PRS 382
>gi|147832340|emb|CAN75517.1| hypothetical protein VITISV_033021 [Vitis vinifera]
Length = 918
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 168/327 (51%), Gaps = 63/327 (19%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+CYLNSVLQCLTYT PLA + +H + C
Sbjct: 109 GLENLGNTCYLNSVLQCLTYTEPLAAYLQSGKHQNSC----------------------- 145
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ +F+ RQEDAHE++ ++++ H CL
Sbjct: 146 -------------------------ISRNFRNARQEDAHEYMVHLLETMHKCCL------ 174
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G S E S+V +IFGG L+SQVKC+ C SNK D +D+SL+I +
Sbjct: 175 -PSGVPSESPSAYE-----KSLVHKIFGGLLRSQVKCMQCSYCSNKFDPFLDLSLEIFKA 228
Query: 208 CSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF-G 265
SL +A+ F E LDG + Y+C CK+ V A KQ+++ ++P +L I LKRF G
Sbjct: 229 DSLHKALVHFTATEQLDGGERQYQCQRCKQKVKALKQLTVHKAPYVLTIHLKRFGAHDPG 288
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KIDK + F + L F+ S + +Y L+G +VH+G+S SGHYY +++ + G WY
Sbjct: 289 QKIDKKVHFGPTMDLKPFVS-GSYEENLKYTLYGVLVHAGWSTHSGHYYCFVRTSTGMWY 347
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ V + + VL +K Y+LF++R
Sbjct: 348 SLDDNRVVQVSERTVLDQKAYMLFYVR 374
>gi|355728036|gb|AES09395.1| ubiquitin specific peptidase 36 [Mustela putorius furo]
Length = 270
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/295 (37%), Positives = 166/295 (56%), Gaps = 29/295 (9%)
Query: 14 SLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSAL 73
SL E+ R G GL NLGN+C+LNS LQCLTYTPPLA++ L +H+ C Q +
Sbjct: 1 SLKWERVYRVGA--GLHNLGNTCFLNSTLQCLTYTPPLASYLLSKEHTRNCHQGSF---- 54
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
C C+++ +V++ + P L+ A HF+ G QEDAHEFLRY++
Sbjct: 55 -------CMLCLMQNHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYIV 107
Query: 134 DACHNTCLR-LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESN 192
DA CL KL R+ +++V +IFGG L+S+VKC C + S+
Sbjct: 108 DAMQKACLNGCAKLDRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSD 153
Query: 193 KVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNI 252
D +D++L+I + ++ A++ F +P+VL G N Y C CKK V A K+ +I ++ N+
Sbjct: 154 TYDPYLDVALEIRQAANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNV 213
Query: 253 LVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFS 307
L + LKRF GGKI K + + E L + +M ++S +P Y L+ +VHSG+S
Sbjct: 214 LTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGEP-VMYGLYAVLVHSGYS 267
>gi|449679016|ref|XP_002157785.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like, partial
[Hydra magnipapillata]
Length = 372
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/301 (39%), Positives = 165/301 (54%), Gaps = 30/301 (9%)
Query: 21 KRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
++ GP GL NLGN+C+LNSVLQ LTYTPPL N+ + H KQ G
Sbjct: 96 QKVGP--GLANLGNTCFLNSVLQVLTYTPPLFNYIMSEYH----KQKCGTVGF------- 142
Query: 81 CPFCILEKRIVRSLSVDLT-LDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNT 139
C C L + + P I L+ + F+ GRQEDAHEFLRYV++ +
Sbjct: 143 CMQCELTNHFTKVFRGNTNGAIKPMSIIQKLQFIGKSFRFGRQEDAHEFLRYVVEGIQKS 202
Query: 140 CLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMD 199
G + + +SV IFGG +SQVKCL C +SN + +MD
Sbjct: 203 -------------DYVGKPNLDKFSKETSVANAIFGGLYRSQVKCLKCNFDSNTFETMMD 249
Query: 200 ISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
I+LD+ + ++ +A+Q+ + L+G+NKY C+ C+ A+K+ SI + PN+L +QLKR
Sbjct: 250 INLDVKDCSTVIQALQRSVCADRLEGDNKYYCERCRMKTVAQKRNSIYKEPNVLTLQLKR 309
Query: 260 FE--GIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYI 317
F+ +FGGKI K + F E L + FM A P YKL+ +VHSGFS +SGHYY Y+
Sbjct: 310 FDFTNMFGGKISKNVVFPEELDIRPFMSVAQNYPLL-YKLYAVLVHSGFSCNSGHYYCYV 368
Query: 318 K 318
K
Sbjct: 369 K 369
>gi|299470394|emb|CBN80155.1| Ubiquitin-specific protease 16 [Ectocarpus siliculosus]
Length = 1055
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/344 (37%), Positives = 182/344 (52%), Gaps = 33/344 (9%)
Query: 22 RGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKREC 81
R GP GLRNLGN+C+LN+ LQCL+Y PPLA LK + + + RE
Sbjct: 66 RMGP--GLRNLGNTCFLNATLQCLSYLPPLAQHLLKGFYGQGPQGIASRGPRPMGGFRE- 122
Query: 82 PFCILE---------KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYV 132
F +E K++ + L +P + LR+ F+ GRQEDAHEFLR++
Sbjct: 123 -FTKVEILAAMEQHTKQVHQGQFTGLGAISPKVLVQNLRMIGRQFRQGRQEDAHEFLRHL 181
Query: 133 IDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESN 192
+D + C L+R+G SS ET + + IFGG L+S++KC CG S+
Sbjct: 182 LDKMVD-CY----LKRRGVKSSAPNRLAET-----TPINRIFGGYLRSRLKCTKCGHCSD 231
Query: 193 KVDEIMDISLDILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPN 251
D MD+S+D+ S+ A+++F E L N+++C CKK V A K +S+ + PN
Sbjct: 232 TFDPFMDLSMDLSRGVRSIDVALRRFVATERLGSGNEWRCGGCKKPVQAEKSLSVFKPPN 291
Query: 252 ILVIQLKRFEGIF---GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSP 308
LV+QLKRF +F KI I F +VL LS + S Y L G +VH+G S
Sbjct: 292 ALVLQLKRF--VFTRKASKIKDHIQFADVLNLSVSGPERSA----LYDLTGVVVHAGGSM 345
Query: 309 DSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
SGHYYAY++ G W +D VS + VL ++ Y+LF+ R
Sbjct: 346 SSGHYYAYVRSCAGMWSRMDDCSVSKVKRETVLRDQAYVLFYTR 389
>gi|392592963|gb|EIW82289.1| cysteine proteinase [Coniophora puteana RWD-64-598 SS2]
Length = 503
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/250 (42%), Positives = 148/250 (59%), Gaps = 16/250 (6%)
Query: 103 PAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGET 162
P + S L++ A+ + GRQEDAHEFLRY +DA +CL SG +
Sbjct: 21 PYLVTSKLQLIAKSMRRGRQEDAHEFLRYAVDALQRSCL------------SGYPPKMDH 68
Query: 163 INGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEV 222
++ V ++FGG L+S+V C CG S+ D I+D+SLDI S SL+EA++KF E
Sbjct: 69 KLAETTWVHKLFGGRLRSRVTCRDCGYNSDTYDRILDLSLDIYGSNSLREALRKFVTVEY 128
Query: 223 LDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSS 282
L G +KYKC+ CKK V A K+ ++ ++P +L I LKRF + G KI I ++E L L
Sbjct: 129 LKGQDKYKCEKCKKPVVAEKKFNVHEAPVVLTIHLKRFSPL-GRKIGHFIHYDEHLALQP 187
Query: 283 FMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS 342
M + S P Y L+G I H+G P+SGHYYAYIK A G+WY ND V+ S + V
Sbjct: 188 AMSEGSFG--PSYTLYGVICHAGGGPNSGHYYAYIKSANGQWYEMNDDMVAPSKV-AVGV 244
Query: 343 EKVYILFFIR 352
+ YILF++R
Sbjct: 245 KNAYILFYMR 254
>gi|331232103|ref|XP_003328714.1| hypothetical protein PGTG_10673 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309307704|gb|EFP84295.1| hypothetical protein PGTG_10673 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 690
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/351 (37%), Positives = 183/351 (52%), Gaps = 46/351 (13%)
Query: 24 GPPLGLRNLGNSCYLNSVLQCLTYTPPLA-NFCLKLQHSSLCKQLTGDSALDAERKRECP 82
GP G N GN+C+LN+ LQ L +TP LA + +HS L A K+ C
Sbjct: 179 GP--GFYNTGNTCFLNATLQALVHTPALAIGLMDRDEHSPESCDL-------ARAKKFCA 229
Query: 83 FCILEKRIVRSLSVDLTLD---------APAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
C R+ R V++ D P+ I L FA + GRQEDAHEFLR ++
Sbjct: 230 LC----RMYRL--VNMCFDKASYGSHAIEPSPINRALSKFAPTMRGGRQEDAHEFLRLLV 283
Query: 134 DACHNTCL--RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAES 191
+A N L R +K ++K S+ V +FGG L+S+V C C S
Sbjct: 284 EAMQNGALQGRAEKAKQK--------------QKESTFVHRMFGGKLRSRVVCEHCNTPS 329
Query: 192 NKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPN 251
+ D +D+SLDI + S+ A++ + + + L G N+YKCD CK L A+K MS+ +P
Sbjct: 330 DTFDNFLDLSLDISQANSVSSALKAYHKFDRLRGANQYKCDKCKCLRDAKKSMSVFSAPP 389
Query: 252 ILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
IL + LKRF G KI+K + FE+ L L M S YKL+ + H G S SG
Sbjct: 390 ILTLHLKRF-NFRGRKINKRVNFEDSLDLKPAMSNESDIT--GYKLYAVVCHRGQSNKSG 446
Query: 312 HYYAYIKDAIGRWYCCNDSYV-SVSTLQEVLS-EKVYILFFIRANQRPVSA 360
HYYA++K + G+WY +DS V S+S + VL+ E YILF+ R + +SA
Sbjct: 447 HYYAHVKASNGKWYVADDSTVESISDSRTVLANEHAYILFYARDRESLLSA 497
>gi|297742807|emb|CBI35523.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/335 (35%), Positives = 181/335 (54%), Gaps = 31/335 (9%)
Query: 1 MGLAHELQM---SWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLK 57
M +EL M SW+ LS P GL N GNSCY N+VLQCLT+T PLA++ L+
Sbjct: 336 MLFPYELFMELYSWEKVELS--------PFGLMNCGNSCYANAVLQCLTFTRPLASYLLQ 387
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
HS CK L E C C E I+ + L +P I S ++ H
Sbjct: 388 GLHSKACKFLFMTPLCPKED--WCFICEFECLILEAREGKSPL-SPMGILSQIQRIGSHL 444
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
GR+EDAHEFLRY +D + CL K G G + +++V FGG
Sbjct: 445 GHGREEDAHEFLRYAVDTMQSVCL-------KDTGVVG------PLAEDTTLVGLTFGGY 491
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKK 236
L S++KC+ C +S + + +MD++++I +L+EA+ +F E+LDG NKY+C C+
Sbjct: 492 LLSKIKCMKCRGKSERCERMMDLTVEIDGDIGTLEEALAQFTATEILDGENKYQCGRCRS 551
Query: 237 LVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYK 296
A+K++ +L++PNIL I LKRF+ GK++K++ F E L ++ +M + D P Y
Sbjct: 552 YEKAKKKLMVLEAPNILTIVLKRFQSSNFGKLNKSVRFPETLNMTPYM-SGTDDRYPVYS 610
Query: 297 LFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCND 329
L+ +VH + SGHY ++K+ +G W+ +D
Sbjct: 611 LYAVVVHLDIMNAAFSGHYVCFVKNFLGDWFRIDD 645
>gi|384495371|gb|EIE85862.1| hypothetical protein RO3G_10572 [Rhizopus delemar RA 99-880]
Length = 493
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 182/349 (52%), Gaps = 34/349 (9%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
+L+ SW S + GP GL N N+C+LN+VL CLTYT PL + L H C
Sbjct: 64 QLRYSWSFS------RNLGP--GLVNAFNTCFLNAVLCCLTYTAPLTQYLLTDNHKKNC- 114
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
+ G L A + K ++R ++ +P S L+ + + GRQEDA
Sbjct: 115 TIHGFCGLCAMSEHVNKCFTTAKSLMRFSAI-----SPNYFTSNLKKISSNLLLGRQEDA 169
Query: 126 HEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
HEF +++DA + L K G +V IFGG LQSQV C
Sbjct: 170 HEFFMFLLDAFTKS---YTPLNSKLTPQEEDAG----------LVHTIFGGKLQSQVTCN 216
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
C A SN D +D+S+ I S++ A+ +F + + +DG Y CD CK+ V A KQM+
Sbjct: 217 NCKANSNSYDRFLDLSVQINGEKSIQNALSRFIEADTIDG---YNCDACKQKVRAYKQMT 273
Query: 246 ILQSPNILVIQLKRFE-GIFGG---KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTI 301
+ P+ LVI LKRFE ++ KI K++ F E L ++ ++ K + EYKL+ +
Sbjct: 274 ANEVPHNLVIHLKRFEYDMYSNGMRKIHKSVKFPETLDMAPYISKEKKVQAAEYKLYAVL 333
Query: 302 VHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
VH+G S D+GHY+AY+K+ G W ND V ++ EVLS++ Y+LF+
Sbjct: 334 VHAGSSCDAGHYFAYVKNPQGGWLLINDETVHPVSINEVLSQRAYMLFY 382
>gi|379030626|ref|NP_001243798.1| inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 7
[Homo sapiens]
gi|187653908|sp|P0C7H9.1|U17L7_HUMAN RecName: Full=Inactive ubiquitin carboxyl-terminal hydrolase
17-like protein 7
Length = 530
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 177/328 (53%), Gaps = 31/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+ +GN+ Y+N LQCLTYT PL+N+ L + S C + C FC ++
Sbjct: 81 GLQKIGNTFYVNVSLQCLTYTLPLSNYMLSREDSQTC-----------HLHKCCMFCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I +L +P + ++ A F G QEDAHEFL + +DA CL
Sbjct: 130 AHITWALH------SPGHVIQPSQVLAAGFHRGEQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFG +SQ+K L C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQLDHHSKDTTLIHQIFGAYWRSQIKYLHCHGVSDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+K+A+++ +P+ L+G N Y C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVKQALEQLVKPKELNGENAYHCGLCLQKAPASKTLTLPTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + + + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY
Sbjct: 291 LAKNVQYPKCRDMQPYMSQQNTGPL-VYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKM 349
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+D+ V+ S + VLS++ Y+LF+I+ ++
Sbjct: 350 DDAEVTASGITSVLSQQAYVLFYIQKSE 377
>gi|383858607|ref|XP_003704791.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Megachile
rotundata]
Length = 880
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 179/355 (50%), Gaps = 32/355 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLK-LQHSSLCKQLTGDSALDAERKRECPFCIL 86
G+ N+GN+CYLNS LQ L + P L N+ L H+S C+Q G EC C +
Sbjct: 125 GMYNVGNTCYLNSTLQALFHIPALVNWLLSDSHHTSKCEQNDGGG--------ECLTCAV 176
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
K + S P I + L++ G+QEDAHEFLRY+++ L K
Sbjct: 177 AKTLQFSHQKSGCAIKPFYIYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEKAYLTRHKA 236
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
+ ++ + ++ + +IFGG ++++VKCL C S D+ +DI
Sbjct: 237 SKL-----------DSYSKETTPINQIFGGYIRTEVKCLQCRHVSTTFQHFQDLLVDIRK 285
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ +L EA+ +F E LD NN YKC+ CKK V A KQ S+ + P +L +QLKRF + GG
Sbjct: 286 ASTLDEALTSYFSREQLD-NNDYKCEACKKRVPATKQFSLERPPKVLCVQLKRF-SVLGG 343
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDP-QP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRW 324
KI K I F++ + + ++ + +P QP YKL + H G S + GHY A K + G++
Sbjct: 344 KISKHIGFKQSIDMGPYLWREPGEPIQPLTYKLMSIVTHMGPSVNCGHYTAVAKVSTGQY 403
Query: 325 YCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP--------VSANGTFASNGVKS 371
Y +DS V +L +LS YI+ F Q P V NGT N S
Sbjct: 404 YSFDDSCVRPISLSNMLSTNAYIMIFEMEQQTPSQVQTQQTVKLNGTVTVNNTIS 458
>gi|440897206|gb|ELR48950.1| Ubiquitin carboxyl-terminal hydrolase 17-like protein 6, partial
[Bos grunniens mutus]
Length = 334
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 173/321 (53%), Gaps = 31/321 (9%)
Query: 32 LGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIV 91
LGN+CY+N+ LQCL++TPPLA++ + QH++LC + C C + +
Sbjct: 1 LGNTCYVNAGLQCLSHTPPLASWMVSQQHATLCPA-----------RSACTLCAMRAHVT 49
Query: 92 RSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGG 151
R+L + P K L F H +QEDAHEFL + ++A CL
Sbjct: 50 RALLHAGEVIRPRK--DLLAGFHRH----QQEDAHEFLMFTLNAMQQGCL---------S 94
Query: 152 GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLK 211
S G E ++V+++IFGG +SQ++CL C S+ D +DISLDI + S++
Sbjct: 95 ASQPSGHASE----DTTVIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVE 150
Query: 212 EAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKA 271
+A+++ +PE LD +N Y C C + V A K++++ + +LV+ LKRF + G K +
Sbjct: 151 QALRELVKPEKLDADNAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAKRAQE 210
Query: 272 IAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSY 331
+ + + L L + + P Y L+ +VHSG+S + GHY+ Y++ G+WY +D+
Sbjct: 211 VRYPQCLDLQPYTSERKAGPL-GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAK 269
Query: 332 VSVSTLQEVLSEKVYILFFIR 352
V+ LS+ Y+LF+ R
Sbjct: 270 VTACDETAALSQSAYVLFYAR 290
>gi|209876007|ref|XP_002139446.1| ubiquitin carboxyl-terminal hydrolase domain-containing protein
[Cryptosporidium muris RN66]
gi|209555052|gb|EEA05097.1| ubiquitin carboxyl-terminal hydrolase domain-containing protein
[Cryptosporidium muris RN66]
Length = 757
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/366 (34%), Positives = 181/366 (49%), Gaps = 45/366 (12%)
Query: 28 GLRNLG-NSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GL N G N+CYLNS+LQ LTY PP+ CL ++H +CK + C C+
Sbjct: 102 GLLNSGWNTCYLNSILQALTYAPPILYDCLNMRHHKVCKYYRENLV--------CLLCMF 153
Query: 87 EKRIV---------RSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACH 137
E I+ ++++ AP ++ ++ F+ G +DAHEFLRY ++ H
Sbjct: 154 EDHILTIFSGNEKNQNINKSQRAIAPNILRCAQKLIWRKFRIGIMQDAHEFLRYFLEGLH 213
Query: 138 NTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEI 197
+ K S I+ ++ + ++F G +SQ+ C +C SN D
Sbjct: 214 KASVP------KNLQSDDIFRKLNPIDTSTTYIGQLFCGFFRSQIVCFSCLYMSNTYDPF 267
Query: 198 MDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQL 257
MDI LDI+ SL+ A F + E L G N+YKC C+K A K++ I + P +L IQL
Sbjct: 268 MDIPLDIVGVSSLENAFSIFTKKEYLRGANQYKCPKCEKKSDASKEVLIEKLPPLLTIQL 327
Query: 258 KRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA----SQDPQPE-----------YKLFGT 300
KRF I G K K+I + EVL +SS+M SQ P+ Y L+
Sbjct: 328 KRFSFIGHGNRKPYKSIKYNEVLDMSSYMTTKNTCNSQVYTPDNSLDTCRQSFIYDLWSV 387
Query: 301 IVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKV--YILFFIRANQRPV 358
+ HSG S GHYY Y K +WYC ND V +S EVLSE + Y+LF+ + NQ +
Sbjct: 388 VCHSGGSLSGGHYYTYAKGLNNQWYCFNDETVRISKSSEVLSETIGAYLLFYAQRNQ--L 445
Query: 359 SANGTF 364
N TF
Sbjct: 446 QFNETF 451
>gi|356529718|ref|XP_003533435.1| PREDICTED: uncharacterized protein LOC100808015 [Glycine max]
Length = 730
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/334 (34%), Positives = 175/334 (52%), Gaps = 35/334 (10%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN++LQC T+T PL H C + C C L
Sbjct: 125 GLLNLGNTCFLNAILQCFTHTVPLVQGLRSSTHLIPCS---------GHKDGFCVICALR 175
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ RSL +P K + L F+ F+ +QEDAHEF++ +D L LKK
Sbjct: 176 IHVERSLVAPGGTLSPLKFVNNLNYFSSDFRRYQQEDAHEFMQCALDKLERCFLDLKK-- 233
Query: 148 RKGGGSSGGGGGGETIN-GGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
+N ++V+++FGG S+++C CG SN + ++D+SL+I N
Sbjct: 234 -------------SNLNFEDDNLVEKVFGGRFISKLQCSTCGHTSNTFEPLIDMSLEIDN 280
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIF 264
SL A++ F + E +D N ++CDNCK+ VS KQ+ + Q+P++ + LKRF+ GI
Sbjct: 281 VDSLPSALESFTKVENIDEN--FRCDNCKEEVSMEKQLMLDQTPSVAALHLKRFKTNGIL 338
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPE------YKLFGTIVHSGFSPDSGHYYAYIK 318
KIDK I F L L + K +D E Y L+ +VH+G S SGHY+ +++
Sbjct: 339 VEKIDKHIDFPLELDLQPYTIKVMEDLVAENDVPLKYDLYAIVVHTGLSSTSGHYFCFVR 398
Query: 319 DAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
A W+ +DS V+ ++ VLS++ YILF+ R
Sbjct: 399 SAPDTWHKLDDSMVTKVSVDSVLSQEAYILFYAR 432
>gi|426358875|ref|XP_004046715.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
6-like [Gorilla gorilla gorilla]
Length = 346
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 159/291 (54%), Gaps = 31/291 (10%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKGCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRALY------RPGHVIQPSQALAAGFHIGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+K+A+++ +PE L+G N Y C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVKQALEQLVKPEELNGENAYHCGLCLQKAPASKTLTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIK 318
+ K + + E L + +M + + P Y L+ +VH+G+S +GHY +Y+K
Sbjct: 291 LAKNVQYPECLDMQPYMSQQNTGPL-VYVLYAVLVHAGWSCHNGHYLSYVK 340
>gi|402912939|ref|XP_003918993.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 340
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 159/291 (54%), Gaps = 31/291 (10%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS LC R + C C +E
Sbjct: 81 GLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQLC-----------HRHKCCMLCTME 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEF +++DA CL
Sbjct: 130 AHITRAL------HCPGHVIQPSQALAAGFHRGKQEDAHEFPMFIVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+K+A+++ +PE L+G N Y C C + A K ++ S +L++ LKRF + G K
Sbjct: 231 QSVKQALEQVVKPEELNGENAYHCGLCLQKAPASKTFTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIK 318
+ K + + E L + +M + + P Y L+ +VH+G+S +GHY +Y+K
Sbjct: 291 LAKNVQYPECLDIQPYMSQQNTGPL-VYVLYAVLVHAGWSCHNGHYLSYVK 340
>gi|194697876|gb|ACF83022.1| unknown [Zea mays]
Length = 495
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 117/317 (36%), Positives = 167/317 (52%), Gaps = 26/317 (8%)
Query: 47 YTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKI 106
+T PL + L+ HS C Q C C EK IV + L +P I
Sbjct: 2 FTRPLTTYLLEGLHSKNCSQ-----------NGWCFMCEFEKLIVEGKRRKIAL-SPTGI 49
Query: 107 QSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGG 166
S L F G+QEDAHEFLRY IDA + C+ K RKGG
Sbjct: 50 LSHLNDIGSSFGPGKQEDAHEFLRYAIDAMQSVCM---KEARKGGVLQSAEE-------- 98
Query: 167 SSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCS-LKEAMQKFFQPEVLDG 225
+++V+ IFGG L+S++KC C S + + ++D++++I S L EA+ +F EVLDG
Sbjct: 99 TTLVQLIFGGYLRSKIKCSRCHVSSEQCEPMLDLTVEIDGDISSLGEALVRFTSTEVLDG 158
Query: 226 NNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMC 285
NKY C CK A+K+++I ++PNIL I LKR++ GKI KAI F E L L+ +M
Sbjct: 159 ENKYHCSRCKSYERAKKKLTIEEAPNILTIALKRYQSGKFGKISKAIRFPETLNLARYMN 218
Query: 286 KASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE 343
+ D P Y L+ +VH + SGHY Y+KD G+W+ +DS V +L V+S+
Sbjct: 219 PDTDDISPVYSLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWFKADDSQVKPVSLDNVMSK 278
Query: 344 KVYILFFIRANQRPVSA 360
Y+L + R + R S+
Sbjct: 279 CAYMLLYARCSPRAPSS 295
>gi|380012929|ref|XP_003690525.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Apis
florea]
Length = 884
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 113/326 (34%), Positives = 169/326 (51%), Gaps = 24/326 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLK-LQHSSLCKQLTGDSALDAERKRECPFCIL 86
G+ N+GN+CYLNS LQ L + P L N+ L H+S C+Q G EC C +
Sbjct: 125 GMYNVGNTCYLNSTLQALFHVPALVNWLLSDSHHTSKCEQNDGGG--------ECLTCAV 176
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
K + S P I + L++ G+QEDAHEFLRY+++ L K
Sbjct: 177 AKTLQFSHQKSGCAIKPFYIYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEKAYLARHKA 236
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
+ ++ + ++ + +IFGG ++++VKCL C S D+ +DI
Sbjct: 237 SKL-----------DSYSKETTPINQIFGGYIRTEVKCLQCRHVSTTFQHFQDLLVDIRK 285
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ +L EA+ +F E LD NN YKC+ CK+ V A KQ S+ + P +L +QLKRF + GG
Sbjct: 286 ASTLDEALSSYFSREQLD-NNDYKCEACKRRVPATKQFSLERPPKVLCVQLKRF-SVLGG 343
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPE--YKLFGTIVHSGFSPDSGHYYAYIKDAIGRW 324
KI K I F++ + + ++ K +P YKL + H G S + GHY A K + G++
Sbjct: 344 KISKHIGFKQTIDMGPYLWKEPGEPSQSLTYKLMSIVTHMGPSVNCGHYTAVAKVSTGQY 403
Query: 325 YCCNDSYVSVSTLQEVLSEKVYILFF 350
Y +DS V +L VLS YI+ F
Sbjct: 404 YSFDDSCVRPLSLSNVLSTNAYIMIF 429
>gi|345806341|ref|XP_003435418.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like, partial
[Canis lupus familiaris]
Length = 597
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 172/325 (52%), Gaps = 30/325 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYT PLA++ L +H + C++ T C C L+
Sbjct: 81 GLQNMGNTCYVNATLQCLTYTEPLASYVLSQKHGTACRKQTS-----------CMLCTLQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R L P ++ L + F +QEDAHE+L +++DA CL K
Sbjct: 130 AHMTRVLC------HPGRVLRPLPLLLAAFHTHKQEDAHEYLMFILDAMQQACLPEDKPS 183
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S++++ IFGG +SQ++CL C S+ ++ +DISLDI +
Sbjct: 184 DSQHAQD------------STLIQHIFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGAA 231
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++ +PE+L+G N Y C C + V A K ++ +L++ LKRF G K
Sbjct: 232 QSVSQALEQLVKPEMLEGENAYHCSKCLEKVPASKVLTWHSCAKVLILVLKRFSDFTGNK 291
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + + + P Y L+ +VH+G+S SG Y+ ++K G+W+
Sbjct: 292 MTKEMQYPECLDMQHSLSERRAGPL-VYVLYAVLVHAGWSCHSGRYFCFVKAGNGQWHKM 350
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ +S + L + Y+LF+++
Sbjct: 351 DDAKISACVVTCALRQLAYVLFYMQ 375
>gi|340716721|ref|XP_003396843.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Bombus
terrestris]
Length = 875
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 168/326 (51%), Gaps = 24/326 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLK-LQHSSLCKQLTGDSALDAERKRECPFCIL 86
G+ N+GN+CYLNS LQ L + P L N+ L H+S C+Q G EC C +
Sbjct: 125 GMYNVGNTCYLNSTLQALFHVPALVNWLLSDSHHTSKCEQNDGGG--------ECLTCAV 176
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
K + S P I + L++ G+QEDAHEFLRY+++ L K
Sbjct: 177 AKTLQSSHQKSGCAIKPFYIYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEKAYLARHKA 236
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
+ ++ + ++ + +IFGG ++++VKCL C S D+ +DI
Sbjct: 237 SKL-----------DSYSKETTPINQIFGGYIRTEVKCLQCRHVSTTFQHFQDLLVDIRK 285
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ +L EA+ +F E LD NN YKC+ CK+ V A KQ S+ + P +L +QLKRF + GG
Sbjct: 286 ASTLDEALSSYFSREQLD-NNDYKCEACKRRVPATKQFSLERPPKVLCVQLKRF-SVLGG 343
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPE--YKLFGTIVHSGFSPDSGHYYAYIKDAIGRW 324
KI K I F++ + + ++ K +P YKL + H G S + GHY A K + G++
Sbjct: 344 KISKHIGFKQTIDMGPYLWKEPGEPTQSLTYKLMSIVTHMGPSVNCGHYTAVAKVSTGQY 403
Query: 325 YCCNDSYVSVSTLQEVLSEKVYILFF 350
Y +DS V +L V S YI+ F
Sbjct: 404 YSFDDSCVRPLSLSNVFSTNAYIMIF 429
>gi|413923519|gb|AFW63451.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 591
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/333 (34%), Positives = 171/333 (51%), Gaps = 25/333 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N+GN+C+LN+ LQC+T+T PL HS+ C + C FC L+
Sbjct: 45 GLSNMGNTCFLNATLQCITHTVPLFLKLRSTDHSTPCSY---------NKDGFCSFCALK 95
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ + S+ ++ APAK + LR + F G+QEDAHEFLR ++D H L
Sbjct: 96 EHVDESIQRSGSVIAPAKFRDNLRKLSSDFWPGQQEDAHEFLRCLLDNLHKCTL---DPM 152
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG GSS S+V EIFGG L+S + C CG S + +D+SL+I
Sbjct: 153 SKGKGSSF---------DEESIVNEIFGGQLKSHLSCCECGHSSETFEPFLDLSLEIDQV 203
Query: 208 CSLKEAMQKFFQPEVL-DGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
L +A+Q F + E + D NK C++C VS KQ+++ ++P+++ LKRF +
Sbjct: 204 DHLVDALQSFTKVEQIGDSENKLTCESCNAQVSKNKQLTLHRAPDVIAFHLKRFTTLDNS 263
Query: 267 --KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRW 324
KIDK + + + L F +Y L+G + HSG P+ GHY I+ + W
Sbjct: 264 VEKIDKHVVYPLEVDLKPFHSNPDTVGGLKYDLYGVVEHSGL-PNYGHYTCTIRSSPSTW 322
Query: 325 YCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
Y NDS V T L+++ YILF++R + P
Sbjct: 323 YFMNDSKVDSCTDSSALNQEAYILFYVRQGKFP 355
>gi|168051663|ref|XP_001778273.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670370|gb|EDQ56940.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 162/275 (58%), Gaps = 6/275 (2%)
Query: 83 FCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR 142
C L++ I ++L+ + +P I LR ++ F+ RQEDAHE++RY+I++ N+C
Sbjct: 1 MCALQEHIRQALASPGGVISPTYIVKNLRCISKSFRPWRQEDAHEYMRYLIESLDNSCTS 60
Query: 143 LKKLRR--KGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDI 200
+ R +G G+ + S+++++FGG L+SQVKC C SN D ++D+
Sbjct: 61 AGRGERGVRGAGAQSSSSSSSSSPQHPSLIQQMFGGQLRSQVKCTVCSTCSNTYDPLLDL 120
Query: 201 SLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF 260
SL+I+ + SL +A+ +F E L+G+N+Y C CK+ V A KQ +I +SP +L IQ KRF
Sbjct: 121 SLEIVRADSLTKALNRFTAVEALEGDNQYHCATCKQKVCALKQFTIDKSPIVLTIQFKRF 180
Query: 261 ---EGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYI 317
GGKIDK I F L + ++ +D Y L+ +VH+G+S SGHYY ++
Sbjct: 181 SASGSSSGGKIDKKIDFGRTLAMRPYISNP-EDSDANYSLYAVLVHAGWSTHSGHYYCFV 239
Query: 318 KDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+ + G W+ +DS V + + VL +K YILF+IR
Sbjct: 240 RTSGGLWHNLDDSRVRQVSEKTVLEQKAYILFYIR 274
>gi|350421826|ref|XP_003492969.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Bombus
impatiens]
Length = 875
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 168/326 (51%), Gaps = 24/326 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLK-LQHSSLCKQLTGDSALDAERKRECPFCIL 86
G+ N+GN+CYLNS LQ L + P L N+ L H+S C+Q G EC C +
Sbjct: 125 GMYNVGNTCYLNSTLQALFHVPALVNWLLSDSHHTSKCEQNDGGG--------ECLTCAV 176
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
K + S P I + L++ G+QEDAHEFLRY+++ L K
Sbjct: 177 AKTLQSSHQKSGCAIKPFYIYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEKAYLARHKA 236
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
+ ++ + ++ + +IFGG ++++VKCL C S D+ +DI
Sbjct: 237 SKL-----------DSYSKETTPINQIFGGYIRTEVKCLQCRHVSTTFQHFQDLLVDIRK 285
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ +L EA+ +F E LD NN YKC+ CK+ V A KQ S+ + P +L +QLKRF + GG
Sbjct: 286 ASTLDEALSSYFSREQLD-NNDYKCEACKRRVPATKQFSLERPPKVLCVQLKRF-SVLGG 343
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPE--YKLFGTIVHSGFSPDSGHYYAYIKDAIGRW 324
KI K I F++ + + ++ K +P YKL + H G S + GHY A K + G++
Sbjct: 344 KISKHIGFKQTIDMGPYLWKEPGEPTQSLTYKLMSIVTHMGPSVNCGHYTAVAKVSTGQY 403
Query: 325 YCCNDSYVSVSTLQEVLSEKVYILFF 350
Y +DS V +L V S YI+ F
Sbjct: 404 YSFDDSCVRPLSLSNVFSTNAYIMIF 429
>gi|67594014|ref|XP_665769.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656592|gb|EAL35536.1| hypothetical protein Chro.80498, partial [Cryptosporidium hominis]
Length = 671
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 180/362 (49%), Gaps = 42/362 (11%)
Query: 12 QPSLLSEKRKRGGPPLGLRNLG-NSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGD 70
+P +S+ R G GL N G N+CY NS+LQ LTY P L+ CL+ H +CK +
Sbjct: 97 EPKEISQFRPYGR---GLANPGWNTCYFNSILQALTYAPYLSIDCLRRNHQKICKHM--- 150
Query: 71 SALDAERKRECPFCILEKRIVRSLSVDLTLDAPAK-------------IQSCLRIFAEHF 117
+ C C+ E V++ LD +K I+ ++ + F
Sbjct: 151 -----KEHLVCIMCMFEDH------VNIMLDNTSKSNIKNDQPVVSSFIKCAQKLIWKRF 199
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
+ G DA EFLRY ++A H +CL K + I ++ + ++F G
Sbjct: 200 RIGMMHDAQEFLRYFLEALHKSCLP------KNLQTDQTFRKIHPIAASTTYIGQLFCGF 253
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKL 237
S++ C C SN D MD+ LDI+ +L+ A++ F + E L G N+Y C C +
Sbjct: 254 FLSRIVCHNCQYTSNTYDPFMDVPLDIMGVSNLENALKLFTKIEYLKGENRYMCPKCNQR 313
Query: 238 VSARKQMSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFM-CKASQDPQPE 294
A KQ+ I + P +L IQLKRF + G K +KAI F +VL L ++ K +
Sbjct: 314 SDASKQLLIEKLPPLLTIQLKRFSYVGHGSRKPNKAINFSDVLDLQPYISSKTYSESSYI 373
Query: 295 YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE--KVYILFFIR 352
YKL+ + HSG + GHYY + K +WYC ND YV + ++ VL+E K Y+LF+ R
Sbjct: 374 YKLWAVVCHSGNTLSCGHYYTHAKSIDNKWYCFNDDYVKPTRIENVLNENHKAYLLFYYR 433
Query: 353 AN 354
++
Sbjct: 434 SD 435
>gi|168011115|ref|XP_001758249.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690705|gb|EDQ77071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 430
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/343 (33%), Positives = 180/343 (52%), Gaps = 25/343 (7%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSC+ N+VLQCLT+T PL + L H CK ++ D C C
Sbjct: 95 PCGLVNCGNSCFANAVLQCLTHTQPLVAYLLGGDHGRHCKCISVDW---------CFMCA 145
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
L++ V+ + +P+ I S L G QEDAHEF+ I + CL
Sbjct: 146 LQQHAVKVIQQRPF--SPSNILSHLSNIGRGLDFGNQEDAHEFMISAIHLMQSICL---- 199
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI- 204
+GG + ++++ IFGG LQSQV C C +SN + +MD++++I
Sbjct: 200 ------DGAGGENAVDACTEETTLIHHIFGGLLQSQVTCKQCRHQSNSYEIMMDLTVEIN 253
Query: 205 LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF 264
N SL++A+ +F E L G NKYKCD C V A K++++ ++PN+LV+ LKRF+G
Sbjct: 254 RNVRSLEDALAQFSAHEFLHGENKYKCDRCDAYVDAYKRIAVHEAPNVLVVTLKRFKGGR 313
Query: 265 GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS--GHYYAYIKDAIG 322
K+ K + F E+L L+ +M + P P Y L+ +VH S S GHY+ + +
Sbjct: 314 YEKLTKEVVFPEILDLTPYMSENGDRP-PHYNLYAVVVHVNESNASHYGHYFCLVMNPSS 372
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFA 365
WY +D V+ ++ V S++ YIL + R++ ++ + T +
Sbjct: 373 HWYRVDDMKVTEVSVNWVTSQEAYILLYKRSSFSNLNLSNTIS 415
>gi|359322364|ref|XP_003639838.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Canis
lupus familiaris]
Length = 533
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 173/325 (53%), Gaps = 30/325 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYT PLA++ L +H + C++ T C C L+
Sbjct: 81 GLQNMGNTCYVNATLQCLTYTEPLASYVLSQKHGTACRKQTS-----------CMLCTLQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R L P ++ L + F +QEDAHE+L +++DA CL K
Sbjct: 130 AHMTRVLC------HPGRVLRPLPLLLAAFHTHKQEDAHEYLMFILDAMQQACLPEDKPS 183
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S++++ IFGG +SQ++CL C + S+ ++ +DISLDI +
Sbjct: 184 DSQHAQD------------STLIQHIFGGYWRSQIQCLHCQSISSTLEPYLDISLDIGAA 231
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++ +PE+L+G N Y C C + V A K +++ +L++ LK F G K
Sbjct: 232 QSVSQALEQLVKPEMLEGENAYHCCKCLEKVPASKVLTLHSCAKVLILVLKGFSDFTGNK 291
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
+ K + + E L + + + P Y L+ +VH+G+S SG Y+ ++K G+W+
Sbjct: 292 MTKEMQYPECLDMQHSLSEQRAGPL-VYVLYAVLVHAGWSCHSGRYFCFVKAGNGQWHKM 350
Query: 328 NDSYVSVSTLQEVLSEKVYILFFIR 352
+D+ VS + L + Y+LF+++
Sbjct: 351 DDAKVSACVVTCALRQLAYVLFYMQ 375
>gi|321479440|gb|EFX90396.1| hypothetical protein DAPPUDRAFT_39928 [Daphnia pulex]
Length = 447
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 180/339 (53%), Gaps = 24/339 (7%)
Query: 22 RGGPPLG--LRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKR 79
+G P+G + N+GN+CY+NS LQ L + P L+N+ ++ C D +
Sbjct: 127 KGSVPVGAGMINMGNTCYMNSTLQALFHVPSLSNWLSSVRQCKNC---------DPNGSQ 177
Query: 80 ECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNT 139
C CI+ K + + ++ P + + L++ +H GRQEDAHEF+RY+++A
Sbjct: 178 LCVVCIIAKTLQSTHDKSGSVIKPILVYNRLKLICKHLVHGRQEDAHEFMRYLMEAMEKA 237
Query: 140 CLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMD 199
L+ S GG ++ + ++ + +IFGG ++++V CL C S D
Sbjct: 238 YLQ-----------SVGGTKLDSRSKETNPLGQIFGGYIRTEVTCLKCKHTSTTFQHFQD 286
Query: 200 ISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
I LDI ++ +L +A+ +F+ E L+G+N YKC+ CK V A K+ SI ++PN+L IQLKR
Sbjct: 287 IPLDIQHASTLDDALGHYFRRERLEGDNAYKCEKCKSKVPATKKFSIERAPNVLCIQLKR 346
Query: 260 FEGIFGGKIDKAIAFEEVLVLSSFMC-KASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIK 318
F G+ GGK+ K I F L L+ F+ ++S P YK I H G S GHY A +
Sbjct: 347 F-GLMGGKMSKHIQFSRNLNLNRFLFHQSSGGPCVTYKFVSLINHMGPSQHCGHYTAIAE 405
Query: 319 DAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
+ G+ Y +D V + +L +S Y+L + + P
Sbjct: 406 ASNGQLYLFDDCSVRLISLNVAMSTGAYVLIYEKVQSSP 444
>gi|294881607|ref|XP_002769432.1| ubiquitin specific protease 66, putative [Perkinsus marinus ATCC
50983]
gi|239872841|gb|EER02150.1| ubiquitin specific protease 66, putative [Perkinsus marinus ATCC
50983]
Length = 755
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 170/337 (50%), Gaps = 27/337 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE---CPFC 84
GLRN GN+CYLNS LQCL+Y A H C RKR C C
Sbjct: 92 GLRNQGNTCYLNSTLQCLSYVSTFAQASEAKIHERTCP-----------RKRAGVWCGLC 140
Query: 85 ILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLK 144
L + R +P ++ L ++ F+ GRQEDAH+ LR +ID TC+R +
Sbjct: 141 NLSNLVCRIHQSHGGHLSPTEVLRHLNLYFARFRPGRQEDAHDALRQLID----TCIRSE 196
Query: 145 KLRRKGGGSSGGGGGG--ETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISL 202
L K S+ ++++ ++FG +++C CG S MDISL
Sbjct: 197 ALPAKVSPSAQNKKAPFVHPSVSQTTMLGQMFGYHTAQRIQCANCGHVSCTFHFDMDISL 256
Query: 203 DILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF-E 261
I ++ E + ++F PE+ N YKC CK+ V+A+K + +P L + LKR+
Sbjct: 257 SISRCRTIDECLTRYFAPEIFKEQNAYKCAKCKRTVTAKKSTRLYDAPMNLTLSLKRYCY 316
Query: 262 GIFGGKIDK---AIAFEEVLVLSSFMCK---ASQDPQPEYKLFGTIVHSGFSPDSGHYYA 315
G FGG+ K + +E+ L LS F+ ++ +Y L G +VHSG +P GHYYA
Sbjct: 317 GRFGGRRQKDGHYVKYEKELDLSKFIADHRASTPGVSNKYILSGVLVHSGATPQLGHYYA 376
Query: 316 YIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
++++ G WYCC+D V+ + VLS++ YILF+ R
Sbjct: 377 FVRNPAGFWYCCDDESVTPAKEHTVLSQQAYILFYER 413
>gi|328777507|ref|XP_001120426.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Apis
mellifera]
Length = 884
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 168/326 (51%), Gaps = 24/326 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLK-LQHSSLCKQLTGDSALDAERKRECPFCIL 86
G+ N+GN+CYLNS LQ L + P L N+ L H+S C+Q G EC C +
Sbjct: 125 GMYNVGNTCYLNSTLQALFHVPALVNWLLSDSHHTSKCEQNDGGG--------ECLTCAV 176
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
K + S P I + L++ G+QEDAHEFLRY+++ L K
Sbjct: 177 AKTLQFSHQKSGCAIKPFYIYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEKAYLARHKA 236
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
+ ++ + ++ + +IFGG ++++VKCL C S D+ +DI
Sbjct: 237 SKL-----------DSYSKETTPINQIFGGYIRTEVKCLQCRHVSTTFQHFQDLLVDIRK 285
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ +L EA+ +F E LD NN YKC+ CK+ V A KQ S+ + P +L +QLKRF + GG
Sbjct: 286 ASTLDEALSSYFSREQLD-NNDYKCEACKRRVPATKQFSLERPPKVLCVQLKRF-SVLGG 343
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPE--YKLFGTIVHSGFSPDSGHYYAYIKDAIGRW 324
KI K I F++ + + ++ K + YKL + H G S + GHY A K + G++
Sbjct: 344 KISKHIGFKQTIDMGPYLWKEPGESSQSLTYKLMSIVTHMGPSVNCGHYTAVAKVSTGQY 403
Query: 325 YCCNDSYVSVSTLQEVLSEKVYILFF 350
Y +DS V +L VLS YI+ F
Sbjct: 404 YSFDDSCVRPLSLSNVLSTNAYIMIF 429
>gi|403335477|gb|EJY66914.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 783
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 189/380 (49%), Gaps = 53/380 (13%)
Query: 5 HELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLC 64
HE+ L++ K G+ NLGN+C+ NSV+QCLT+T PL +C +H S C
Sbjct: 79 HEMSDFQADQLIANKNIETRITYGMPNLGNTCFFNSVMQCLTHTKPLFLYCASKEHYSKC 138
Query: 65 KQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQED 124
+++ C C + I++ + D P I S L+ ++ G+QED
Sbjct: 139 -----------QKRESCFLCTYTQYILK-IQTDKRAQ-PQLIVSRLKTIWNRYRVGQQED 185
Query: 125 AHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGS--SVVKEIFGGALQSQV 182
AHEFL +++ N+C + + R + I+ + + +IFGG +SQV
Sbjct: 186 AHEFLILFLESFINSCFQTARPPR------------DIIHKHQYKTPILKIFGGKSRSQV 233
Query: 183 KCLACGAESNKVDEIMDISLDIL--------NSCSLKEAMQKFFQPEVLDGNNKYKCDNC 234
CL C +SN ++++ +SLD+ + + + +F E L G NKY+C NC
Sbjct: 234 HCLGCNYKSNTFEDLITLSLDLPFGARGKPPGPMTFESCLNRFCTSEHLKGENKYQCSNC 293
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCK---ASQDP 291
KK A K+ SI ++P IL+I KRF+ FG K+ I + + L F + A DP
Sbjct: 294 KKKCEATKRFSIDKTPRILIIHFKRFDA-FGRKVPTFIKYPQSFSLKEFTSQSIDAKHDP 352
Query: 292 --------------QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTL 337
Q Y LFG +VH G SGHYY+Y K++ G WY C+DS +S S+
Sbjct: 353 KIRQELQTNTDKNSQELYDLFGVVVHMGGGCRSGHYYSYCKNSTGNWYECDDSSISTSST 412
Query: 338 QEVLSEKVYILFFIRANQRP 357
++ L ++ Y+LF+ + Q P
Sbjct: 413 EQALKQQAYVLFYQKRIQTP 432
>gi|328854662|gb|EGG03793.1| hypothetical protein MELLADRAFT_78495 [Melampsora larici-populina
98AG31]
Length = 717
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/337 (35%), Positives = 175/337 (51%), Gaps = 26/337 (7%)
Query: 19 KRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERK 78
K +R GP G RN GN+C+LN+ LQ L YTP LA L Q + T DS + K
Sbjct: 221 KLQRMGP--GFRNAGNTCFLNATLQALVYTPALAVGLLDRQ------EHTRDSCRLSHIK 272
Query: 79 RECPFCILEKRIVRSLSVDLTLDA--PAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDAC 136
C C + I L + T P I + L A + GRQEDAHEFLR +I+A
Sbjct: 273 NFCALCSMRNLISMCLEPNKTARVIEPTPITNSLTKIAPRMRGGRQEDAHEFLRLLIEAM 332
Query: 137 HNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDE 196
N G G + + ++ + +F G +S+V C C S+ D
Sbjct: 333 QN------------GALGGQEAQAKQKDKEATFIHRMFAGKFRSRVTCQHCEGTSDTFDT 380
Query: 197 IMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQ 256
+D+SLDI + ++ A++K + ++L G N+YKC+ CK+L A+K++S+ ++P IL +
Sbjct: 381 FLDLSLDIGEANNVPNALRKLRKLDLLKGANQYKCEKCKRLRDAKKELSVHEAPPILTLH 440
Query: 257 LKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAY 316
+KRF G KI+K I F + L L++ M K + P Y L+ + H G S SGHYY+Y
Sbjct: 441 IKRF-NFRGKKINKRIQFSDSLDLNAAMDKDA--PHTRYNLYAVVCHQGPSNTSGHYYSY 497
Query: 317 IKDAIGRWYCCND-SYVSVSTLQEVLSEKVYILFFIR 352
IK + +WY +D S V Q +++ YI F+ R
Sbjct: 498 IKTSDRQWYRADDCSIDRVDRGQVFRNDEAYIFFYSR 534
>gi|444727772|gb|ELW68250.1| Ubiquitin carboxyl-terminal hydrolase 36 [Tupaia chinensis]
Length = 2413
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 136/244 (55%), Gaps = 26/244 (10%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS +QCLTYTPPLAN+ L +H+ C Q + C C+++
Sbjct: 370 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHARSCHQGS-----------FCMLCVMQ 418
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
I ++ + P L+ A HF+ G QEDAHEFLRY IDA CL KL
Sbjct: 419 NHITQAFANSGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGCAKL 478
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R+ +++V +IFGG L+S+VKC C + S+ D +DI+L+I
Sbjct: 479 DRQ--------------TQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQ 524
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F +P+VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 525 AANIVRALELFVKPDVLSGENAYMCARCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 584
Query: 267 KIDK 270
KI K
Sbjct: 585 KITK 588
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 234 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 293
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M ++S +P
Sbjct: 619 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGEPV- 677
Query: 294 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 678 MYGLYAVLVHSGYSCHAGHYYCYVKASSGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLR 736
>gi|147832982|emb|CAN68406.1| hypothetical protein VITISV_035043 [Vitis vinifera]
Length = 945
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 197/420 (46%), Gaps = 67/420 (15%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GN C + +L + + N+CL C
Sbjct: 429 PRGLLNCGNRCLRDYLLFVICMLGCVTNWCL--------------------------MCE 462
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
LEK ++ L +P++I S +R G QEDAHEFLR ++ + + C
Sbjct: 463 LEKHVMMLRESGGPL-SPSRILSHMRSINCQIGDGSQEDAHEFLRLLVTSMQSIC----- 516
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQS---QVKCLACGAESNKVDEIMDISL 202
L + GG ET + ++ FGG L+S QVKCL C ES + + IMD++L
Sbjct: 517 LEKLGGEREVDARLQET-----TFIQHTFGGRLRSKCNQVKCLRCHLESERYENIMDLTL 571
Query: 203 DILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE 261
+I SL++A+ +F PE LDG N Y+C C V ARKQ+SI ++PNIL I LKRF+
Sbjct: 572 EIFGWVESLEDALTQFTTPEDLDGENMYRCRRCTTYVRARKQLSIHEAPNILTIVLKRFQ 631
Query: 262 GIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKD 319
GKI+K I F ++L + FM + D P Y L+ +VH + SGHY AY+KD
Sbjct: 632 EGRYGKINKCITFPDMLDMIPFM-TGTYDVPPLYMLYAVVVHMDTLNASFSGHYVAYVKD 690
Query: 320 AIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKSHENGKEAY 379
G W+ +D+ V + +V+SE YILF++R+ RP A
Sbjct: 691 LQGNWFRVDDAEVQPVSTNQVMSEGAYILFYMRSWPRPPRAF----------------PV 734
Query: 380 KGVKGTVPLKAVATKPSAEQSSRKTPSTISKVEKVPSNPRLKFSISGSSGCKGVPPTSNG 439
K ++ P A +SSR P V PSNP+ + + SS TSNG
Sbjct: 735 KAIQQQAPASAKHCSSKTHKSSRSKPRG-DFVGLEPSNPKREVAPGFSSA------TSNG 787
>gi|449479063|ref|XP_002187377.2| PREDICTED: uncharacterized protein LOC100225609 [Taeniopygia
guttata]
Length = 819
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 184/348 (52%), Gaps = 35/348 (10%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
++ M WQ +R+R P GL NLGN+CY+N++LQCLTYTPPLAN+ L +HS C+
Sbjct: 115 KISMDWQ------QRQR--PGAGLFNLGNTCYINAILQCLTYTPPLANYLLSYEHSLSCQ 166
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
Q + C C +E + + LS + P + L+ E F+ RQE+A
Sbjct: 167 Q-----------QGFCMMCTMEAHVRKVLSSSASAILPGAVLRDLKFIGEEFEYDRQENA 215
Query: 126 HEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
++FLR +DA H CL + + +++V +IF G ++S+V CL
Sbjct: 216 YKFLRRTLDAMHRACLSCNL---------------DVSSQETTIVHQIFRGFMKSRVTCL 260
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
+C A + +D+SLDI + SL ++ P+ LD ++C CKK +A K+++
Sbjct: 261 SCQAVVDSYKAFLDVSLDIKAASSLTTVLEDCVTPKQLDQKGCFRCSKCKKKAAASKKVT 320
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
+ ++P +L + L+R + G KI+K + + E L L +M + +P L+ ++HSG
Sbjct: 321 VHRAPRVLTLCLERADQWTGTKINKFVEYPEYLDLRPYMSDTAGEPL-LCSLYAIVIHSG 379
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 353
+ GH+ Y+K + G WY +D V + VL ++ Y+LF+ RA
Sbjct: 380 DTCLEGHFLCYVKASNGLWYRMDDESVDNCDIHTVLGQQAYLLFYARA 427
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 19/110 (17%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
++ M WQ +R+R P GL NLGN+CY+N++LQCLTYTPPLAN+ L +HS C+
Sbjct: 12 KISMDWQ------QRQR--PGAGLFNLGNTCYINAILQCLTYTPPLANYLLSYEHSLSCQ 63
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAE 115
Q + C C +E + + LS + P + L+ +E
Sbjct: 64 Q-----------QGFCMMCTMEAHVRKVLSSSASAILPGAVLRDLKYISE 102
>gi|164660262|ref|XP_001731254.1| hypothetical protein MGL_1437 [Malassezia globosa CBS 7966]
gi|159105154|gb|EDP44040.1| hypothetical protein MGL_1437 [Malassezia globosa CBS 7966]
Length = 574
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/345 (33%), Positives = 177/345 (51%), Gaps = 35/345 (10%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N GN+CY+NSV+Q L +TPPLA L +L + K F L
Sbjct: 127 GLHNRGNTCYMNSVMQSLLHTPPLATALLTQSAPTLLGRYGVPRTQKQAVKAANSFNALT 186
Query: 88 --KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHN--TCLRL 143
K + +P S LR FA + GRQEDAHE+LR +++A TC
Sbjct: 187 EMKDFFAHAYSGASAVSPTAFVSNLRKFARPLRPGRQEDAHEYLRLLLEALQQACTCFAG 246
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
K ++ S +++++ IFGG L+S+V C +C S+ D ++D+SLD
Sbjct: 247 KDIKPNDPILS------------TTLIQRIFGGRLRSRVTCYSCRHNSDTYDPMLDLSLD 294
Query: 204 ILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEG 262
+ ++K+A+ F E L +KY+CD+C++ V A K+ SI Q+P +L + LKRF G
Sbjct: 295 VRKGIHTVKQALDAFTAAEAL--ADKYQCDHCQRRVEATKRFSIDQAPMVLTVHLKRF-G 351
Query: 263 IFGGKIDKAIAFEEVLVLSSFMCK------ASQDPQPE---------YKLFGTIVHSGFS 307
IFG KI+K I++ + L L +M + A + +P+ Y+LF + H G
Sbjct: 352 IFGNKINKPISYSDRLHLGRYMSERDKGLGADVEDEPDLGTLGAAQQYRLFAIVHHYGSG 411
Query: 308 PDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
P+ GHY A ++ A G+W +DS+VS + Y+LF++R
Sbjct: 412 PNVGHYVASVRSADGQWLRMDDSFVSKLPQCPLDDPSAYLLFYLR 456
>gi|66361578|ref|XP_627322.1| ubiquitin carboxyl-terminal hydrolase of the cysteine proteinase
fold [Cryptosporidium parvum Iowa II]
gi|46228703|gb|EAK89573.1| ubiquitin carboxyl-terminal hydrolase of the cysteine proteinase
fold [Cryptosporidium parvum Iowa II]
Length = 765
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/371 (32%), Positives = 177/371 (47%), Gaps = 51/371 (13%)
Query: 12 QPSLLSEKRKRGGPPLGLRNLG-NSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGD 70
+P +S R G GL N G N+CY NS+LQ LTY P L+ CL+ H +CK +
Sbjct: 97 EPKEISHFRPYGR---GLANPGWNTCYFNSILQALTYAPYLSIDCLRRNHQKICKHMKDH 153
Query: 71 SALDAERKRECPFCILEKRIVRSLSVDLTLDAPAK-------------IQSCLRIFAEHF 117
C C+ E V++ LD +K I+ ++ + F
Sbjct: 154 LV--------CIMCMFEDH------VNIMLDNTSKSNTKNDQPVVSSFIKCAQKLIWKRF 199
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
+ G DA EFLRY ++A H +CL K + I ++ + ++F G
Sbjct: 200 RIGMMHDAQEFLRYFLEALHKSCLP------KNLQTDQTFRKIHPIAASTTYIGQLFCGF 253
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKL 237
S++ C C SN D MD+ LDI+ +L+ A++ F + E L G N+Y C C +
Sbjct: 254 FLSRIVCHNCQYTSNTYDPFMDVPLDIMGVSNLENALKLFTKIEYLKGENRYMCPKCNQR 313
Query: 238 VSARKQMSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKASQDPQPE- 294
A KQ+ I + P +L IQLKRF + G K +KAI F +VL L +M +
Sbjct: 314 SDASKQLLIEKLPPLLTIQLKRFSYVGHGSRKPNKAINFSDVLDLQPYMSSKTYSESKVS 373
Query: 295 ---------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE-- 343
YKL+ + HSG + GHYY + K +WYC ND YV + ++ VL+E
Sbjct: 374 SSKSESSYIYKLWAVVCHSGNTLSCGHYYTHAKSIDNKWYCFNDDYVKPTRIENVLNENH 433
Query: 344 KVYILFFIRAN 354
K Y+LF+ R++
Sbjct: 434 KAYLLFYYRSD 444
>gi|222622509|gb|EEE56641.1| hypothetical protein OsJ_06049 [Oryza sativa Japonica Group]
Length = 897
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 162/286 (56%), Gaps = 21/286 (7%)
Query: 78 KRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACH 137
K C C LE+ +L +P++I S LR G QEDAHEFLR+++ +
Sbjct: 389 KNWCLMCELEQ-YASTLRESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQ 447
Query: 138 NTCLRLKKLRRKGGGSSGGGGGGETINGG---SSVVKEIFGGALQSQVKCLACGAESNKV 194
CL G GG + + +++++++FGG L+S+VKCL C ES +
Sbjct: 448 GACL-------------DGLGGEKQVEASLQETTLIQQMFGGRLKSKVKCLRCYHESERY 494
Query: 195 DEIMDISLDILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
+ IMD++L+I SL++A+ +F PE LDG N YKC C V ARKQ+S+ + PNIL
Sbjct: 495 ENIMDLTLEIHGWVESLQDALTQFTAPEDLDGENMYKCGRCSAYVKARKQLSVHEVPNIL 554
Query: 254 VIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH--SGFSPDSG 311
+ LKRF+ GKI+K + F ++L + F+ A +P P Y L+ +VH + + SG
Sbjct: 555 TVVLKRFQTGKYGKINKCVTFPDMLDMVPFVTGAGDNP-PLYFLYAVVVHVDTENASFSG 613
Query: 312 HYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
HY +Y+KD G W +DS V +L +V+SE Y+LF++R+ RP
Sbjct: 614 HYISYVKDMQGTWLRIDDSEVQAVSLNQVMSEGAYMLFYMRSFPRP 659
>gi|170041357|ref|XP_001848432.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167864941|gb|EDS28324.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1034
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/346 (33%), Positives = 179/346 (51%), Gaps = 32/346 (9%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLK-LQHSSLCK 65
+Q+ W+ + K + G G+ N+GN+CYLNS LQ L + P +AN+ + + H C
Sbjct: 119 VQIGWKAT--GRKWQTGA---GMTNVGNTCYLNSTLQALFHVPAIANWLISDVTHRERCD 173
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
G C C + K ++ S S + P + S LR+ +H GRQEDA
Sbjct: 174 DSNGQGG--------CIICAMAKTLLASQSQNQGAIKPYLVYSKLRLVCKHLVLGRQEDA 225
Query: 126 HEFLRYVIDACHNTCL-RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
HEFLRY+++A + L R K + + + ++ + +I GG L+S+VKC
Sbjct: 226 HEFLRYLVEAMEKSYLARFKNSKE-----------FDQLTKETTPLNQILGGYLRSEVKC 274
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
L+C S D+ LDI + S+++A+ +F E L+ N+YKC+ CKK V+A KQ
Sbjct: 275 LSCQHISTTFQHFEDLLLDIRKANSIEDALDVYFARERLE-ENQYKCEACKKRVAATKQF 333
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHS 304
S+ ++P L IQLKRF + GGKI+K + L LS + CK + Y+L + H
Sbjct: 334 SLERAPFALCIQLKRFS-MMGGKINKHVELRNRLDLSPY-CKTG---KLTYRLVSMVTHL 388
Query: 305 GFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
G + GHY A G +Y +DS V ++Q V S YI+F+
Sbjct: 389 GNTQHCGHYTAIGGTESGSYYVFDDSSVRPISMQNVTSTNAYIIFY 434
>gi|302854895|ref|XP_002958951.1| hypothetical protein VOLCADRAFT_70119 [Volvox carteri f.
nagariensis]
gi|300255697|gb|EFJ39986.1| hypothetical protein VOLCADRAFT_70119 [Volvox carteri f.
nagariensis]
Length = 252
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 141/237 (59%), Gaps = 14/237 (5%)
Query: 117 FKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGG 176
F+ GRQED+HEFLR ++DA H CL K+ + K ++ V IFGG
Sbjct: 29 FRLGRQEDSHEFLRCLLDAMHEACL--KRFKPKPPPELAA----------TTFVYRIFGG 76
Query: 177 ALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKK 236
L+SQ++C S D +D+SL+I + SL+ A+ F PEVLDG NKY+C K
Sbjct: 77 RLRSQIECEGVDYVSRTYDPFLDLSLEINRAQSLERALSAFTAPEVLDGPNKYRCPKNNK 136
Query: 237 LVSARKQMSILQSPNILVIQLKRFE-GIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEY 295
LV A K++S+ ++PN+L + KRFE G FG KI+K + F L L +M + PQ Y
Sbjct: 137 LVRAVKRISVEEAPNVLTVHFKRFEYGGFGAKINKKVDFGTQLDLRPYMSNV-KGPQQLY 195
Query: 296 KLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+L+G +VH G+S +SGHY Y+K A G W+ C+D V+ + VL ++ YILF++R
Sbjct: 196 ELYGVLVHHGYSVNSGHYICYVKAANGLWHVCDDHRVTAVGERTVLDQRAYILFYVR 252
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 25/35 (71%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSS 62
G NLGN+C++NSVLQ L +TPPLA F L Q S
Sbjct: 3 GYHNLGNTCFMNSVLQALAHTPPLAEFRLGRQEDS 37
>gi|294866356|ref|XP_002764675.1| hypothetical protein Pmar_PMAR029116 [Perkinsus marinus ATCC 50983]
gi|239864365|gb|EEQ97392.1| hypothetical protein Pmar_PMAR029116 [Perkinsus marinus ATCC 50983]
Length = 1289
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 170/337 (50%), Gaps = 27/337 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE---CPFC 84
GLRN GN+CYLNS LQCL+Y A H C RKR C C
Sbjct: 92 GLRNQGNTCYLNSTLQCLSYVSTFAQASEAKIHERTCP-----------RKRAGVWCGLC 140
Query: 85 ILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLK 144
L + R +P ++ L ++ F+ GRQEDAH+ LR +ID TC+R +
Sbjct: 141 NLSNLVCRIHQSHGGHLSPTEVLRHLNLYFARFRPGRQEDAHDALRQLID----TCIRSE 196
Query: 145 KLRRKGGGSSGGGGGG--ETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISL 202
L K S+ ++++ ++FG +++C CG S MDISL
Sbjct: 197 ALPAKISPSAQNKKAPFVHPSVSQTTMLGQMFGYHTAQRIQCANCGHVSCTFHFDMDISL 256
Query: 203 DILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF-E 261
I ++ E + ++F PE+ N YKC CK+ V+A+K + +P L + LKR+
Sbjct: 257 SISRCRTIDECLTRYFAPEIFKEQNAYKCAKCKRNVTAKKSTRLYDAPMNLTLSLKRYCY 316
Query: 262 GIFGGKIDK---AIAFEEVLVLSSFMC---KASQDPQPEYKLFGTIVHSGFSPDSGHYYA 315
G FGG+ K + +E+ L LS F+ ++ +Y L G +VHSG +P GHYYA
Sbjct: 317 GRFGGRRQKDGHYVKYEKELDLSKFIADHGASTPGVSNKYTLSGVLVHSGATPQLGHYYA 376
Query: 316 YIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
++++ G WYCC+D V+ + VLS++ YILF+ R
Sbjct: 377 FVRNPAGFWYCCDDESVTPAKEHTVLSQQAYILFYER 413
>gi|308809419|ref|XP_003082019.1| probable ubiquitin carboxyl terminal hydrolase (ISS) [Ostreococcus
tauri]
gi|116060486|emb|CAL55822.1| probable ubiquitin carboxyl terminal hydrolase (ISS) [Ostreococcus
tauri]
Length = 580
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/339 (34%), Positives = 174/339 (51%), Gaps = 28/339 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GN+C+ + LQCL PL + + K+ AE +R C C
Sbjct: 77 PSGLTNGGNTCFAAAALQCLRRATPLTAWFDDVDTFHDAKRC-------AETRRFCVVCE 129
Query: 86 LEKRIVRSLSVDLTLDAPA--KIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
+ + R+ + DA + ++ + A+ F+ GRQED+HEF+ ++DA H + L
Sbjct: 130 YARHLERARE---SRDAHSIGRLTKDISKVAKQFRRGRQEDSHEFITALLDAMH--VMFL 184
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
K L GG + ++V+ +FGG VKCL CG S +DI L+
Sbjct: 185 KDL--------GGEKKFDLRTQETTVIYHVFGGYTLGTVKCLECGYVSKSFQSTLDIPLE 236
Query: 204 ILNS-CSLKEAMQKFF-QPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE 261
+ S++EA+++ F E+L G+NKYKC CK LV A+K I SPNIL I LKR+
Sbjct: 237 VTGKITSIEEALRENFCSEELLQGSNKYKCSKCKALVRAKKGTKIHVSPNILTIPLKRYS 296
Query: 262 GIFGGKIDKAIAFEEVLVLSSFMCKAS--QDPQPEYKLFGTIVHSGF--SPDSGHYYAYI 317
KI K + + L FM + ++ PEY+LFG +VH F S +GHY AY+
Sbjct: 297 TGRFSKITKYVTYPATFSLVEFMSDDAPYEESAPEYELFGVLVHQDFYASAHAGHYVAYV 356
Query: 318 KDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
K W CND+ +S S+ +E + +K YILF+ R+ R
Sbjct: 357 KLRDDSWVLCNDNRISPSSEKEAMKQKAYILFYERSRAR 395
>gi|297303100|ref|XP_002806114.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like, partial
[Macaca mulatta]
Length = 347
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 163/307 (53%), Gaps = 31/307 (10%)
Query: 49 PPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQS 108
PPLAN+ L +HS LC + C C +E I R+L P +
Sbjct: 1 PPLANYMLSREHSQLC-----------HHHKCCMLCTMEAHITRALH------RPGHVIQ 43
Query: 109 CLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSS 168
+ F G+QEDAHEFL +++DA CL G + + ++
Sbjct: 44 PSQALVAGFHRGKQEDAHEFLMFIVDAMKRACL-------------PGHKQVDHDSEDTT 90
Query: 169 VVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNK 228
++ +IFGG +SQ+KCL C S+ D +DI+LDI + S+K+A+++ +PE L+G N
Sbjct: 91 LIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQSVKQALEQVVKPEELNGENA 150
Query: 229 YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKAS 288
Y C C + A K ++ S +L++ LKRF + G K+ K + + E L + +M + +
Sbjct: 151 YHCGLCLQKAPASKTFTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQN 210
Query: 289 QDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
P Y L+ +VH+G+S +GHY +Y+K G+WY +D+ V+ ++ VLS++ Y+L
Sbjct: 211 TGPLV-YVLYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVL 269
Query: 349 FFIRANQ 355
F+I+ +Q
Sbjct: 270 FYIQKSQ 276
>gi|307193249|gb|EFN76140.1| Ubiquitin carboxyl-terminal hydrolase 36 [Harpegnathos saltator]
Length = 874
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 180/351 (51%), Gaps = 28/351 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLK-LQHSSLCKQLTGDSALDAERKRECPFCIL 86
G+ N+GN+CYLNS LQ L + P L N+ L H+S +Q G + EC C +
Sbjct: 125 GMLNIGNTCYLNSTLQALFHVPALVNWLLSDPHHNSKYEQSDGST--------ECLTCAV 176
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
K + S P I + L+ G+QEDAHEFLRY+++ L K
Sbjct: 177 AKTLQFSHLKSGGAIKPFHIYNKLKSICRTMMHGQQEDAHEFLRYLLEGMERAYLTRHKA 236
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
+ ++ + ++ + +IFGG ++++VKCL C S D+ +DI
Sbjct: 237 TKL-----------DSYSKETTPINQIFGGYIRTEVKCLQCQHVSTTFQHFQDLLVDIRK 285
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ +L EA+ +F E LD NN YKC+ CK+ V A KQ ++ + P +L +QLKRF + GG
Sbjct: 286 ANTLDEALNGYFSREQLD-NNDYKCEACKRRVPATKQFTLERPPKVLCVQLKRF-SVGGG 343
Query: 267 KIDKAIAFEEVLVLSSFMCKA-SQDP-QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRW 324
KI + I F++ + +S ++ + + P Q YKL + H G S + GHY A + + G++
Sbjct: 344 KISRHIGFKQTIDMSRYLWREPGESPKQLTYKLMSVVTHMGPSVNCGHYTAIAQVSSGQY 403
Query: 325 YCCNDSYVSVSTLQEVLSEKVYILFF----IRANQRPVSANGTFASNGVKS 371
Y +D+ V +L VLS YI+ F NQ+ NGT ++ V +
Sbjct: 404 YTFDDACVRPISLNNVLSTNAYIMIFEMNSSSQNQQTAKVNGTTSAKSVST 454
>gi|332027218|gb|EGI67307.1| Ubiquitin carboxyl-terminal hydrolase 36 [Acromyrmex echinatior]
Length = 874
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 175/346 (50%), Gaps = 26/346 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLK-LQHSSLCKQLTGDSALDAERKRECPFCIL 86
G+ N+GN+CYLNS LQ L + P L N+ L H+S C+Q D EC C +
Sbjct: 122 GMYNVGNTCYLNSTLQALFHVPALVNWLLSDPHHNSKCEQNILDGG------GECLTCAV 175
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
K + S P + + L++ G+QEDAHEFLRY+++ L K
Sbjct: 176 AKTLQFSHQKSGGAIKPFYVYNKLKLICRTMVPGQQEDAHEFLRYLLEGMERAYLTKHKA 235
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
+ S ++ + +IFGG ++++VKCL C S D+ +DI
Sbjct: 236 TKLDNYSKE-----------TTPINQIFGGYIRTEVKCLQCQHVSTTFQHFQDLLVDIRK 284
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ +L EA+ +F E LD NN YKC+ CK+ V A KQ ++ + P +L +QLKRF GG
Sbjct: 285 ANTLDEALNSYFSREQLD-NNDYKCEACKRRVPATKQFTLERPPKVLCVQLKRF-SYLGG 342
Query: 267 KIDKAIAFEEVLVLSSFMCKA-SQDP-QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRW 324
KI + I F++ + + ++ + + P Q YKL + H G S + GHY A + + G++
Sbjct: 343 KISRHIGFKQTIDMGQYLWREPGESPKQLTYKLMSMVTHMGPSVNCGHYTAIAQVSSGQY 402
Query: 325 YCCNDSYVSVSTLQEVLSEKVYILFFIRAN----QRPVSANGTFAS 366
Y +DS V +L VLS YI+ F N Q+ NGT ++
Sbjct: 403 YSFDDSCVRPISLNNVLSTNAYIMIFEMENDSQTQQTAKMNGTTSA 448
>gi|413926008|gb|AFW65940.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 489
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/262 (38%), Positives = 157/262 (59%), Gaps = 20/262 (7%)
Query: 102 APAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGE 161
+P++I S LR G QEDAHEFLR+++ + CL G GG +
Sbjct: 19 SPSRILSNLRNIGCRLGGGTQEDAHEFLRHLVMSMQAACL-------------DGLGGEK 65
Query: 162 TINGG---SSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSC-SLKEAMQKF 217
+ +++++++FGG L+S+VKCL C ES + + IMD++L+I SL++A+ +F
Sbjct: 66 HVEPSLQETTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQF 125
Query: 218 FQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEV 277
PE LDG+N YKC +C V ARKQ+S+ + PNIL + LKRF+ GKI+K + F ++
Sbjct: 126 TAPEDLDGDNMYKCGSCAAYVKARKQLSVHEVPNILTVVLKRFQSGKYGKINKCVTFPDM 185
Query: 278 LVLSSFMCKASQDPQPEYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVS 335
L + F+ + +P P Y L+ +VH + + SGHY +Y+KD G W +DS V V
Sbjct: 186 LDMVPFVTGSGDNP-PLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQVV 244
Query: 336 TLQEVLSEKVYILFFIRANQRP 357
++ +V+SE Y+LF++R+ RP
Sbjct: 245 SVNQVMSEGAYMLFYMRSFPRP 266
>gi|384254219|gb|EIE27693.1| cysteine proteinase [Coccomyxa subellipsoidea C-169]
Length = 728
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/395 (33%), Positives = 189/395 (47%), Gaps = 48/395 (12%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSL-CKQLTGDSALDAERKRECPFC 84
P GL NLGNSC+ N+ LQCL T P+ + H+S C G CP C
Sbjct: 152 PTGLINLGNSCFANAALQCLMATRPMGAYLASGLHTSRGCPAPPGAF---------CPLC 202
Query: 85 ILEKRIVRSLSVDLTLDAPAKIQSCL---RIFAEHFKCGRQEDAHEFLRYVIDACHNTCL 141
LE + R + D PA Q L R+F G QED EFL + A + L
Sbjct: 203 QLEL-LAREMRRG---DGPATAQPLLHRVRLFCRDMVAGEQEDTSEFLNGLQTAVEHIML 258
Query: 142 RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDIS 201
+G ++ + ++++ IFGG + Q C C S D +S
Sbjct: 259 H----------QAGSPAKLDSRSKETTLLHHIFGGYERMQNVCTVCCNVSASFDPFSMLS 308
Query: 202 LDI-LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF 260
++I + +L++A+ ++ E+L G+N Y C+ CKK V A +++ +PN L I LKRF
Sbjct: 309 VEIDEDITTLEDALARYTHTELLAGDNAYSCEKCKKDVEAERRLCFEVAPNTLQICLKRF 368
Query: 261 EGIFG--GKIDKAIAFEEVLVLSSFMCKASQDPQP-EYKLFGTIVHSGF--SPDSGHYYA 315
+ G K +A+ F+E L L FM A+ D P Y+L+G IVH G SP SGHY A
Sbjct: 369 VSVDGVPMKNSQAVDFQEQLNLGPFMASAALDGGPARYRLYGIIVHEGTCNSPHSGHYVA 428
Query: 316 YIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP-------------VSANG 362
Y++ A G+W+ CND+ V T VLS + Y+LF+ R RP +A G
Sbjct: 429 YVRGADGQWWECNDAQVYSCTTGYVLSRRAYMLFYAREAPRPSLPELAQLAAVPRSAATG 488
Query: 363 TFASNGVKSHENGKEAYKGVKGTVPLKAVATKPSA 397
S + +NG EA G T+P A +PS+
Sbjct: 489 VSGSKPSPTLQNGYEA--GHAATMPSAAQGDEPSS 521
>gi|303288592|ref|XP_003063584.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454652|gb|EEH51957.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 294
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/346 (32%), Positives = 173/346 (50%), Gaps = 79/346 (22%)
Query: 32 LGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIV 91
LGNSC+LN++LQ LT+T PL C H
Sbjct: 1 LGNSCFLNAILQALTHTTPLLELCRVGAHG------------------------------ 30
Query: 92 RSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGG 151
RS ++ L P + L + A HF GRQEDAHE LR +++ +CL
Sbjct: 31 RSCALRRVLLTPVPVFGNLHLLARHFTRGRQEDAHELLRLCLESMDESCL---------- 80
Query: 152 GSSGGGGGGETINGGS---SVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSC 208
+N G +VV+ IF GA ++QVKC ACGA+SN D +D+SL++
Sbjct: 81 -----------LNAGRAPPTVVERIFQGAFRNQVKCGACGAKSNAYDPFLDVSLELPRRV 129
Query: 209 S-LKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
+++A++ F + E L+G N YKC+ C L A K+++I ++P +LVI LKRF+ +FGGK
Sbjct: 130 HRVRDALELFTKEETLEGENAYKCEACDALRPATKRLTIHEAPAVLVIHLKRFD-LFGGK 188
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQ-PEYKLFGTIVHSGFSPDSGHYYAY---------- 316
I + +AF++V+ LS M + + + P Y+L+ +VH+G S GHYYAY
Sbjct: 189 ISRPVAFDDVVELSGHMSDTAVESRGPRYRLYAMVVHAGSSVGCGHYYAYARASGGGGGG 248
Query: 317 ------------IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
+ + WY +D+ V + +EV ++ Y+LF+
Sbjct: 249 GGAAAEEDSFYGTRSSGDDWYLFDDAVVRPVSAREVFDDEAYVLFY 294
>gi|357143206|ref|XP_003572840.1| PREDICTED: uncharacterized protein LOC100831961 [Brachypodium
distachyon]
Length = 712
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 170/328 (51%), Gaps = 26/328 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRN+GN+C+LN+ LQC+T+T PL H + C + C FC L+
Sbjct: 171 GLRNMGNTCFLNATLQCITHTVPLFKKLRSTDHPTPCS---------YDEDGFCSFCALK 221
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ I S+ ++ PA+ + LR +F+ G+QEDAHEFLR ++D H L K
Sbjct: 222 EHIEESIRRSGSVLMPARFKDNLRSIL-YFRPGQQEDAHEFLRCLLDNLHKCTLDPKS-- 278
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG SS S+VK +FGG L+SQ+ C CG S + +D+SL+I
Sbjct: 279 -KGKPSSF---------DEESIVKRVFGGQLKSQLTCRECGHCSETSEPFLDLSLEIDQV 328
Query: 208 CSLKEAMQKFFQ-PEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
L A++ F + E+ D NK C++C V K++ + ++P+++ QLKRF +
Sbjct: 329 DDLVAALESFTKVEEIGDAENKLTCESCNVQVCKGKRLLLDKTPDVIAFQLKRFTTLDHS 388
Query: 267 --KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRW 324
KIDK +A+ L L F + + +Y L+G + HSG P+ GHY I+ + W
Sbjct: 389 IEKIDKHVAYPSELDLKPFHSNPVSEEELKYDLYGVVEHSGL-PNYGHYVCAIRSSPSTW 447
Query: 325 YCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+ NDS V T L ++ YILF++R
Sbjct: 448 HLMNDSQVDSITETSALHQEAYILFYVR 475
>gi|195588034|ref|XP_002083763.1| GD13899 [Drosophila simulans]
gi|251765135|sp|B4QIS3.1|UBP36_DROSI RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|194195772|gb|EDX09348.1| GD13899 [Drosophila simulans]
Length = 988
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 184/348 (52%), Gaps = 31/348 (8%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQ-HSSLCK 65
+++ W+ SE++ + G G+ N+GN+CYLNS LQ L + P LAN+ + Q H + C
Sbjct: 63 IRIGWK---QSERKWQVG--TGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCN 117
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
AE C C + K ++ + S + + P I S L+ +H GRQEDA
Sbjct: 118 V--------AEPGSGCIICAMAKTLLATQS-NQSAVRPFLIYSKLKQICKHMVVGRQEDA 168
Query: 126 HEFLRYVIDACHNTCL-RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
HEFLR++++A L R + + + + ++ + +IFGG L+S+V+C
Sbjct: 169 HEFLRFLVEAMERAYLMRFRNYKEL-----------DQLVKETTPLGQIFGGYLRSEVRC 217
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
L+C S D+ LDI + SL++A + F E L+ + YKC+ CKK VSA KQ
Sbjct: 218 LSCNHVSITFQHFQDLLLDIRKADSLEDAFEGHFSRERLE-DMGYKCEGCKKKVSATKQF 276
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCK--ASQDPQPEYKLFGTIV 302
S+ ++P L IQLKRF I G K+ K I+F+ + LS + + A+Q Y+L +
Sbjct: 277 SLERAPITLCIQLKRFSMI-GNKLTKQISFKPRIDLSKYAARSPAAQAQPLTYRLVSMVT 335
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
H G S GHY A G +Y +DSYV T+Q V + YI+FF
Sbjct: 336 HLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPITMQNVCNTNAYIMFF 383
>gi|332819099|ref|XP_001175011.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17 [Pan
troglodytes]
Length = 354
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 160/289 (55%), Gaps = 20/289 (6%)
Query: 67 LTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAH 126
L+ + + R + C C ++ I R+L + P + + A F G+QEDAH
Sbjct: 2 LSREHSQTCHRHKGCMLCTMQAHITRALHI------PGHVIQPSQALAAGFHRGKQEDAH 55
Query: 127 EFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLA 186
EFL + +DA CL G E + ++++ +IFGG +SQ+KCL
Sbjct: 56 EFLMFTVDAMEKACL-------------PGHKQVEHHSKDTTLIHQIFGGYWRSQIKCLH 102
Query: 187 CGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSI 246
C S+ D +DI+LDI + S+++A+++ +PE L+G N Y C C + A K +++
Sbjct: 103 CHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGLCLQRAPASKTLTL 162
Query: 247 LQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF 306
S +L++ LKRF + G K+ K + + E L + +M + + P Y L+ +VH+G+
Sbjct: 163 HTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLV-YVLYAVLVHAGW 221
Query: 307 SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQ 355
S +GHY++Y+K G+WY +D+ V+ S++ VLS++ Y+LF+I+ ++
Sbjct: 222 SCHNGHYFSYVKAQEGQWYKMDDAEVTASSVTSVLSQQAYVLFYIQKSE 270
>gi|198466021|ref|XP_001353862.2| GA18934 [Drosophila pseudoobscura pseudoobscura]
gi|251765181|sp|Q2LZB1.2|UBP36_DROPS RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|198150413|gb|EAL29597.2| GA18934 [Drosophila pseudoobscura pseudoobscura]
Length = 1059
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/368 (33%), Positives = 187/368 (50%), Gaps = 33/368 (8%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQ-HSSLCK 65
+++ W+ SE++ + G G+ N+GN+CYLNS LQ L + P LAN+ + Q H C
Sbjct: 156 IRIGWK---QSERKWQVG--TGMINVGNTCYLNSTLQALFHIPALANWLVSEQTHLENCN 210
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
+ C C + K + + S + P I S L+ +H GRQEDA
Sbjct: 211 ITESNGG--------CIICAMAKTLQSTQSCQSAMR-PFHIYSKLKQICKHMVVGRQEDA 261
Query: 126 HEFLRYVIDACHNTCL-RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
HEFLR++++A L R + + + + ++ + +IFGG L+S+V+C
Sbjct: 262 HEFLRFLVEAMEKAYLMRFRNFKEL-----------DQLVKETTPLNQIFGGYLRSEVRC 310
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
L+C S D+ LDI S +L+EA +F E L+ + YKC+ CKK VSA KQ
Sbjct: 311 LSCSHVSITFQHFQDLLLDIRKSDTLEEAFDGYFSRERLE-DMGYKCEGCKKKVSATKQF 369
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSF-MCKASQDPQP-EYKLFGTIV 302
S+ ++P L IQLKRF + G K+ K I+F+ + LS F + QP Y+L +
Sbjct: 370 SLERAPITLCIQLKRF-SMIGNKLTKTISFKPRIDLSRFAARSPAAAAQPLTYRLVSMVT 428
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF--IRANQRPVSA 360
H G S GHY A G +Y +DSYV +Q V + YI+F+ + P+ +
Sbjct: 429 HLGVSQHCGHYTAIGMTESGSYYNFDDSYVRPIAMQSVCNTNAYIMFYELDLSQTTPLKS 488
Query: 361 NGTFASNG 368
NG +NG
Sbjct: 489 NGLRLTNG 496
>gi|290998513|ref|XP_002681825.1| ubiquitin specific protease [Naegleria gruberi]
gi|284095450|gb|EFC49081.1| ubiquitin specific protease [Naegleria gruberi]
Length = 868
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/334 (36%), Positives = 188/334 (56%), Gaps = 26/334 (7%)
Query: 21 KRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAER--K 78
K+ GP GL+NLGN+C++N+ LQCL YTP L NF L + K+ +ALDA
Sbjct: 195 KKIGP--GLQNLGNTCFMNAALQCLMYTPALRNFLLSRKIGEQSKKF---NALDAMSLLA 249
Query: 79 RECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHN 138
RE F E RS ++ +P I L+ F G QEDAHEF+ ++D N
Sbjct: 250 REM-FLGNETSSGRSSRSNVV--SPGFIAKHLKGIG-GFVLGYQEDAHEFIVQLLDKMEN 305
Query: 139 TCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ K G + I ++ V ++FGG L+SQ+K + SNK D +
Sbjct: 306 AIVEKYK------------GKMDNIVLETNPVHQVFGGYLRSQIKTMETNYISNKYDAFI 353
Query: 199 DISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLK 258
DI L + N S++++ Q + P+ LDG NKYKC V+A K+++I ++P L++QLK
Sbjct: 354 DIELQLNNCTSVEKSFQNYITPDRLDGKNKYKCPKTNTYVTASKKLTIHEAPINLILQLK 413
Query: 259 RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIK 318
RF IFG K+ K I++E+ L +S +M ++++ Y L+G +VHSG S SGHYY+++K
Sbjct: 414 RF-NIFGKKVSKKISYEDTLDISPYM--SNKNTVARYSLYGVLVHSGGSSSSGHYYSFVK 470
Query: 319 DAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
++ G WY +DS V+ + L ++ Y+LF+ R
Sbjct: 471 NSNGIWYRMDDSSVTQVSQNTALGQQAYMLFYSR 504
>gi|156547946|ref|XP_001604800.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like isoform 1
[Nasonia vitripennis]
Length = 881
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 170/328 (51%), Gaps = 28/328 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
G+ N+GN+CYLNS LQ L + P L N+ L H S C+Q G EC C +
Sbjct: 126 GMYNVGNTCYLNSTLQALFHVPALVNWLLSDAHHESKCEQNDGAG--------ECLTCAV 177
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL-RLKK 145
K + S P + + L++ G+QEDAHEFLRY+++ L R K
Sbjct: 178 SKTLQFSHQKSGEAIKPFYVYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEKAYLARHKA 237
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
L+ ++ + ++ + +IFGG ++++VKCL C S D+ LDI
Sbjct: 238 LKL------------DSYSKETTPINQIFGGYIRTEVKCLQCKHVSTTFQHFQDLLLDIR 285
Query: 206 NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFG 265
+ +L EA+ +F E LD NN YKC+ CK+ V A KQ + + P +L +QLKRF + G
Sbjct: 286 KAGTLDEALAGYFSQEHLD-NNDYKCEACKRRVPATKQFILERPPKVLCVQLKRF-SVLG 343
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG 322
GKI + I F++ + + ++ + + QP Y+L + H G S + GHY A + + G
Sbjct: 344 GKISRHIGFKQTVDMGPYVRRQPGE-QPSKLIYRLASMVTHMGPSVNCGHYTAIAQVSSG 402
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFF 350
++Y +DS V +L V+S YI+ F
Sbjct: 403 KFYSFDDSSVRPISLNNVVSTNAYIMIF 430
>gi|345485737|ref|XP_003425327.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like isoform 2
[Nasonia vitripennis]
Length = 888
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 171/328 (52%), Gaps = 21/328 (6%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
G+ N+GN+CYLNS LQ L + P L N+ L H S C+Q ++ EC C +
Sbjct: 126 GMYNVGNTCYLNSTLQALFHVPALVNWLLSDAHHESKCEQNVRHHYF-SDGAGECLTCAV 184
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL-RLKK 145
K + S P + + L++ G+QEDAHEFLRY+++ L R K
Sbjct: 185 SKTLQFSHQKSGEAIKPFYVYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEKAYLARHKA 244
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
L+ ++ + ++ + +IFGG ++++VKCL C S D+ LDI
Sbjct: 245 LKL------------DSYSKETTPINQIFGGYIRTEVKCLQCKHVSTTFQHFQDLLLDIR 292
Query: 206 NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFG 265
+ +L EA+ +F E LD NN YKC+ CK+ V A KQ + + P +L +QLKRF + G
Sbjct: 293 KAGTLDEALAGYFSQEHLD-NNDYKCEACKRRVPATKQFILERPPKVLCVQLKRF-SVLG 350
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG 322
GKI + I F++ + + ++ + + QP Y+L + H G S + GHY A + + G
Sbjct: 351 GKISRHIGFKQTVDMGPYVRRQPGE-QPSKLIYRLASMVTHMGPSVNCGHYTAIAQVSSG 409
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFF 350
++Y +DS V +L V+S YI+ F
Sbjct: 410 KFYSFDDSSVRPISLNNVVSTNAYIMIF 437
>gi|345485740|ref|XP_003425328.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like isoform 3
[Nasonia vitripennis]
Length = 895
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 171/328 (52%), Gaps = 21/328 (6%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
G+ N+GN+CYLNS LQ L + P L N+ L H S C+Q ++ EC C +
Sbjct: 126 GMYNVGNTCYLNSTLQALFHVPALVNWLLSDAHHESKCEQNVRHHYF-SDGAGECLTCAV 184
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL-RLKK 145
K + S P + + L++ G+QEDAHEFLRY+++ L R K
Sbjct: 185 SKTLQFSHQKSGEAIKPFYVYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEKAYLARHKA 244
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
L+ ++ + ++ + +IFGG ++++VKCL C S D+ LDI
Sbjct: 245 LKL------------DSYSKETTPINQIFGGYIRTEVKCLQCKHVSTTFQHFQDLLLDIR 292
Query: 206 NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFG 265
+ +L EA+ +F E LD NN YKC+ CK+ V A KQ + + P +L +QLKRF + G
Sbjct: 293 KAGTLDEALAGYFSQEHLD-NNDYKCEACKRRVPATKQFILERPPKVLCVQLKRF-SVLG 350
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG 322
GKI + I F++ + + ++ + + QP Y+L + H G S + GHY A + + G
Sbjct: 351 GKISRHIGFKQTVDMGPYVRRQPGE-QPSKLIYRLASMVTHMGPSVNCGHYTAIAQVSSG 409
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFF 350
++Y +DS V +L V+S YI+ F
Sbjct: 410 KFYSFDDSSVRPISLNNVVSTNAYIMIF 437
>gi|194867188|ref|XP_001972018.1| GG15285 [Drosophila erecta]
gi|251765095|sp|B3NC86.1|UBP36_DROER RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|190653801|gb|EDV51044.1| GG15285 [Drosophila erecta]
Length = 1085
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 182/348 (52%), Gaps = 31/348 (8%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQ-HSSLCK 65
+++ W+ SE++ + G G+ N+GN+CYLNS LQ L + P LAN+ + Q H C
Sbjct: 158 IRIGWK---QSERKWQVG--TGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLENCN 212
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
AE C C + K ++ + S + + P I S L+ +H GRQEDA
Sbjct: 213 V--------AESGGGCIVCAMAKTLLATQS-NQSAVRPFLIYSKLKQICKHMVVGRQEDA 263
Query: 126 HEFLRYVIDACHNTCL-RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
HEFLR++++A L R + + + + ++ + +IFGG L+S+V+C
Sbjct: 264 HEFLRFLVEAMERAYLMRFRNYKEL-----------DQLVKETTPLGQIFGGYLRSEVRC 312
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
L+C S D+ LDI + +L++A + F E L+ + YKC+ CKK VSA KQ
Sbjct: 313 LSCNHVSITFQHFQDLLLDIRKADTLEDAFEGHFSRERLE-DMGYKCEGCKKKVSATKQF 371
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCK--ASQDPQPEYKLFGTIV 302
S+ ++P L IQLKRF + G K+ K I+F+ + LS + + A+Q Y+L +
Sbjct: 372 SLERAPITLCIQLKRFS-MIGNKLTKQISFKPRIDLSKYAARSPAAQAQPLTYRLVSMVT 430
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
H G S GHY A G +Y +DSYV +Q V + YI+F+
Sbjct: 431 HLGVSQHCGHYTAIGSTDTGSYYNFDDSYVRPIAMQSVCNTNAYIMFY 478
>gi|147857493|emb|CAN82847.1| hypothetical protein VITISV_000504 [Vitis vinifera]
Length = 1142
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 151/274 (55%), Gaps = 22/274 (8%)
Query: 81 CPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
C C ++K + R+L + AP + S LR RQEDAHE++ +++ H C
Sbjct: 341 CALCAIQKHVSRALQSTGRILAPKDLVSNLR-------NARQEDAHEYMVNLLETMHKCC 393
Query: 141 LRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDI 200
L G S E S+V +IFGG L+SQVKC+ C SNK D +D+
Sbjct: 394 L-------PSGVPSESPSAYE-----KSLVHKIFGGLLRSQVKCMQCSYCSNKFDPFLDL 441
Query: 201 SLDILNSCSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
SL+I + SL +A+ F E LDG + Y+C CK+ V A KQ+++ ++P +L I LKR
Sbjct: 442 SLEIFKADSLHKALMHFTATEQLDGGERQYQCQRCKQKVKALKQLTVHKAPYVLTIHLKR 501
Query: 260 FEGIF-GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIK 318
F G KIDK + F + L F+ S + +Y L+G +VH+G+S SGHYY +++
Sbjct: 502 FGAHDPGQKIDKKVHFGPTMDLKPFVS-GSYEENLKYTLYGVLVHAGWSTHSGHYYCFVR 560
Query: 319 DAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+ G WY +D+ V + + VL +K Y+LF++R
Sbjct: 561 TSTGMWYSLDDNRVVQVSERTVLDQKAYMLFYVR 594
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 26/33 (78%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQH 60
GL NLGN+C+LNSVLQCLTYT PLA + +H
Sbjct: 108 GLENLGNTCFLNSVLQCLTYTEPLAAYLQSGKH 140
>gi|357619275|gb|EHJ71919.1| hypothetical protein KGM_06054 [Danaus plexippus]
Length = 880
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/350 (33%), Positives = 171/350 (48%), Gaps = 32/350 (9%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLK-LQHSSLC 64
++Q+ WQ + + G++N+GN+CYLNS LQ L + P AN+ + H+ C
Sbjct: 111 KVQLGWQSAWAAGA--------GMQNVGNTCYLNSTLQALFHVPAFANWLVSDCTHAEKC 162
Query: 65 KQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQED 124
Q + C C + ++ + P ++ S LR+ +H GRQED
Sbjct: 163 NQ-----------EEACVICGMRATLMATQKSGGAAIKPWQVYSKLRLICKHLTPGRQED 211
Query: 125 AHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
AHEFLRY+++A C L R ET + + +I GG L+S V+C
Sbjct: 212 AHEFLRYLVEAMEK-CY----LSRLINADKLDQYSKET-----TPLNQILGGYLRSTVRC 261
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
LAC S D+ LDI +L EA+ FF E L+ + YKC+ C K VSA KQ
Sbjct: 262 LACHHLSTTYQHFQDLLLDIRKHSTLDEALDSFFSRERLE-DLGYKCEACNKKVSATKQF 320
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHS 304
I ++P +L I LKRF + GGK+ K + F + + L+ ++ + Q YKL + H
Sbjct: 321 FIERAPMVLCIALKRF-SLAGGKLSKHVQFRKKINLNKYIYNKNNPHQLSYKLVSLVTHL 379
Query: 305 GFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRAN 354
G S +SGHY A + +Y +DS V L VL YI+FF + N
Sbjct: 380 GPSQNSGHYTAIGQAPNSNYYQFDDSCVRPIPLSAVLGTNAYIMFFEKDN 429
>gi|145351953|ref|XP_001420324.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580558|gb|ABO98617.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 312
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/331 (36%), Positives = 172/331 (51%), Gaps = 28/331 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N GN+C+ S LQCL PL + ++ D A AE ++ C C
Sbjct: 2 GLTNGGNTCFAASALQCLRRATPLTAWFDGVEKFH-------DVARCAETRKFCVVCEYS 54
Query: 88 KRIVRSLSVDLTLDAPA--KIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
+ + R+++ + DA + ++ + A F+ GRQED+HEF+ ++DA H + LK
Sbjct: 55 QHLERAMA---SRDAHSIGRLTKDISKVARQFRRGRQEDSHEFINALLDAMH--VIFLKD 109
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
L GG + ++V+ +FGG VKCL CG S +DI L++
Sbjct: 110 L--------GGEKKYDLRTRETTVIYHVFGGYTLGTVKCLECGYVSKNFQSTLDIPLEVT 161
Query: 206 NSC-SLKEAMQK-FFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI 263
S++EA+++ F EVL G+NKYKC CK LV A+K I SPNIL I LKR+
Sbjct: 162 GKIGSVEEALRENFCTEEVLSGSNKYKCSKCKALVRAKKGSKIHVSPNILTIPLKRYSTG 221
Query: 264 FGGKIDKAIAFEEVLVLSSFMCKAS--QDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKD 319
KI K I + L+ FM + + PEY+LFG +VH F S SGHY AY+K
Sbjct: 222 RFSKITKYIKYPSNFSLAEFMSDDAPYEVTAPEYELFGVLVHQDFYASAHSGHYVAYVKL 281
Query: 320 AIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
W CNDS VS S+ ++ + +K YILF+
Sbjct: 282 RDDSWVLCNDSRVSPSSEKDAMKQKAYILFY 312
>gi|195174068|ref|XP_002027804.1| GL16307 [Drosophila persimilis]
gi|194115480|gb|EDW37523.1| GL16307 [Drosophila persimilis]
Length = 530
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/368 (33%), Positives = 187/368 (50%), Gaps = 33/368 (8%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQ-HSSLCK 65
+++ W+ S E++ + G G+ N+GN+CYLNS LQ L + P LAN+ + Q H C
Sbjct: 157 IRIGWKQS---ERKWQVGT--GMINVGNTCYLNSTLQALFHIPALANWLVSEQTHLENCN 211
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
E C C + K + + S + P I S L+ +H GRQEDA
Sbjct: 212 --------ITESNGGCIICAMAKTLQSTQSCQSAMR-PFHIYSKLKQICKHMVVGRQEDA 262
Query: 126 HEFLRYVIDACHNTCL-RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
HEFLR++++A L R + + + + ++ + +IFGG L+S+V+C
Sbjct: 263 HEFLRFLVEAMEKAYLMRFRNFKEL-----------DQLVKETTPLNQIFGGYLRSEVRC 311
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
L+C S D+ LDI S +L+EA +F E L+ + YKC+ CKK VSA KQ
Sbjct: 312 LSCSHVSITFQHFQDLLLDIRKSDTLEEAFDGYFSRERLE-DMGYKCEGCKKKVSATKQF 370
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSF-MCKASQDPQP-EYKLFGTIV 302
S+ ++P L IQLKRF I G K+ K I+F+ + LS F + QP Y+L +
Sbjct: 371 SLERAPITLCIQLKRFSMI-GNKLTKTISFKPRIDLSRFAARSPAAAAQPLTYRLVSMVT 429
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF--IRANQRPVSA 360
H G S GHY A G +Y +DSYV +Q V + YI+F+ + P+ +
Sbjct: 430 HLGVSQHCGHYTAIGMTESGSYYNFDDSYVRPIAMQSVCNTNAYIMFYELDLSQTTPLKS 489
Query: 361 NGTFASNG 368
NG +NG
Sbjct: 490 NGLRLTNG 497
>gi|195376439|ref|XP_002047004.1| GJ13192 [Drosophila virilis]
gi|251765136|sp|B4LG38.1|UBP36_DROVI RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|194154162|gb|EDW69346.1| GJ13192 [Drosophila virilis]
Length = 1214
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/350 (33%), Positives = 182/350 (52%), Gaps = 33/350 (9%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCK 65
+++ W+ S E++ + G G+ N+GN+CYLNS LQ L + P LAN+ + + H C
Sbjct: 177 IRIGWKQS---ERKWQVGA--GMLNVGNTCYLNSTLQALFHIPALANWLVSETSHVENCN 231
Query: 66 --QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQE 123
+ G C C + K + + S + + P I + LR +H GRQE
Sbjct: 232 ISESCGSGG--------CIICAMAKTLQTTQS-NQSAVRPFLIYTKLRQICKHMVVGRQE 282
Query: 124 DAHEFLRYVIDACHNTCL-RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQV 182
DAHEFLR++++A L R + + + + ++ + +IFGG L+S+V
Sbjct: 283 DAHEFLRFLVEAMEKAYLMRFRNFKEL-----------DQLVKETTPISQIFGGYLRSEV 331
Query: 183 KCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
+CL+C S D+ LDI + +L+EA +F E L+ + YKC+ CKK VSA K
Sbjct: 332 RCLSCNHVSITFQHFQDLLLDIRKADTLEEAFDGYFSRERLE-DMGYKCEGCKKKVSATK 390
Query: 243 QMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKA-SQDPQP-EYKLFGT 300
Q S+ ++P L IQLKRF + G K+ K I+F+ + LS F ++ + QP Y+L
Sbjct: 391 QFSLERAPITLCIQLKRF-SMMGNKLTKQISFKPRIDLSRFAARSPTAAAQPLSYRLVSM 449
Query: 301 IVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
+ H G S GHY A G +Y +DSYV +Q V + YI+F+
Sbjct: 450 VTHLGVSQHCGHYTAIGLTEAGSYYNFDDSYVKPIAMQSVCNTNAYIMFY 499
>gi|452824642|gb|EME31643.1| ubiquitin carboxyl-terminal hydrolase 36/42 [Galdieria sulphuraria]
Length = 605
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 162/319 (50%), Gaps = 28/319 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLK--LQHSSLCKQLTGDSALDAERKRECPFCI 85
GLRNLGN+C+LN+ LQ L + PP A L+ +S C +G C C
Sbjct: 96 GLRNLGNTCFLNAALQSLLHCPPFATALLEKIFSAASNCPSHSG----------YCSICA 145
Query: 86 LEKRIVRSLSVDLTLDA--PAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
+EK S D + + P + L++ + +F GRQ DAHE++R+++D + L
Sbjct: 146 VEKTAQNVFSSDTSFQSYSPVDLVRNLKVLSRNFTPGRQADAHEYIRFLLDDMNRILL-- 203
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
G G + ++V EIFGG +S+V C CG+ S+ V+ +D+SLD
Sbjct: 204 --------GIPRGKLCHDRQQEMHTLVHEIFGGCYESKVSCQNCGSSSDTVEPFLDVSLD 255
Query: 204 ILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI 263
+ +L +A++ F PE L G N+Y C CK+ A K + PN+ + LKRF
Sbjct: 256 LEGVSTLAKALKGFTTPERLFGPNRYFCSQCKQRTDASKVFQFRRIPNVFIFHLKRFR-- 313
Query: 264 FGGKIDKAIAFEEVLVLSSFM-CKASQDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAI 321
K +K ++++E S F+ K + +P Y+L IVH GFS GHYYAY++++
Sbjct: 314 LSKKENKFVSYDETFDFSPFIPLKGNSIRKPVYYRLCAVIVHEGFSIHGGHYYAYVRNSN 373
Query: 322 GRWYCCNDSYVSVSTLQEV 340
G WY +D S Q+V
Sbjct: 374 GIWYLKDDECTSRVVQQKV 392
>gi|195127497|ref|XP_002008205.1| GI13361 [Drosophila mojavensis]
gi|251765101|sp|B4KXJ5.1|UBP36_DROMO RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|193919814|gb|EDW18681.1| GI13361 [Drosophila mojavensis]
Length = 1185
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 171/329 (51%), Gaps = 28/329 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCK--QLTGDSALDAERKRECPFC 84
G+ N+GN+CYLNS LQ L + P LAN+ + + H C + G C C
Sbjct: 200 GMLNVGNTCYLNSTLQALFHIPALANWLVSETAHVENCNISESCGSGG--------CIIC 251
Query: 85 ILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL-RL 143
+ K + + S + T P I + LR +H GRQEDAHEFLR++++A L R
Sbjct: 252 AMAKTLQTTQS-NQTAVRPFLIYTKLRQICKHMVVGRQEDAHEFLRFLVEAMEKAYLMRF 310
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
+ + + + ++ + +IFGG L+S+V+CL+C S D+ LD
Sbjct: 311 RNYKEL-----------DQLVKETTPLSQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLD 359
Query: 204 ILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI 263
I + +L+EA +F E L+ + YKC+ CKK VSA KQ S+ ++P L IQLKRF +
Sbjct: 360 IRKADTLEEAFDGYFSRERLE-DMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRF-SM 417
Query: 264 FGGKIDKAIAFEEVLVLSSFMCKA-SQDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAI 321
G K+ K I+F+ + LS F ++ + QP Y+L + H G S GHY A
Sbjct: 418 MGNKLTKQISFKPRIDLSRFAARSPAASTQPLSYRLVSMVTHLGVSQHCGHYTAIGLTES 477
Query: 322 GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
G +Y +DSYV +Q V + YI+F+
Sbjct: 478 GSYYNFDDSYVRPIAMQSVCNTNAYIMFY 506
>gi|157131284|ref|XP_001662174.1| hypothetical protein AaeL_AAEL002698 [Aedes aegypti]
gi|108881830|gb|EAT46055.1| AAEL002698-PA [Aedes aegypti]
Length = 1100
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 177/347 (51%), Gaps = 29/347 (8%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQ-HSSLCK 65
+Q+ W+ + K G G N+GN+CYLNS LQ L + P +AN+ L + H C+
Sbjct: 182 VQLGWKAT--GHKWNTGA---GFTNVGNTCYLNSTLQALFHVPAIANWLLSDKAHRERCE 236
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
D + C C + K ++ S + P + S L++ +H GRQEDA
Sbjct: 237 --------DNVNGQGCIICAMAKTLMASQNSSQGSIKPYLVVSKLQLVCKHLVPGRQEDA 288
Query: 126 HEFLRYVIDACHNTCL-RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
HEFLRY+++A + L R K + + + ++ + +I GG L+S+VKC
Sbjct: 289 HEFLRYLVEAMEKSYLARFKNSKEL-----------DQYSKETTPLNQILGGYLRSEVKC 337
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
L+C S D+ LDI S++EA+ +F E L+ +YKC+ CKK V+A KQ
Sbjct: 338 LSCHHVSTTFQHFEDLLLDIRKVNSIEEALTMYFARERLE-EMQYKCEACKKKVAATKQF 396
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCK-ASQDPQPEYKLFGTIVH 303
S+ ++P L IQLKRF + G KI+K + + L L+ F K A + + YKL + H
Sbjct: 397 SLERAPFALCIQLKRFS-MMGNKINKHVELKTRLDLTPFSSKSAVSNCRLTYKLVSMVTH 455
Query: 304 SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
G + GHY A G +Y +DS V +LQ V S YI+F+
Sbjct: 456 LGSTQHCGHYTAIGGTESGTYYVFDDSLVRPISLQNVTSTNAYIIFY 502
>gi|195492054|ref|XP_002093826.1| GE21508 [Drosophila yakuba]
gi|251765138|sp|B4PIW8.1|UBP36_DROYA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|194179927|gb|EDW93538.1| GE21508 [Drosophila yakuba]
Length = 1082
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 181/348 (52%), Gaps = 31/348 (8%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQ-HSSLCK 65
+++ W+ SE++ + G G+ N+GN+CYLNS LQ L + P LAN+ + Q H C
Sbjct: 158 IRIGWK---QSERKWQVG--TGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLENCN 212
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
AE C C + K ++ + S + + P I S L+ +H GRQEDA
Sbjct: 213 V--------AESGGGCIVCAMAKTLLATQS-NQSAVRPFLIYSKLKQICKHMVVGRQEDA 263
Query: 126 HEFLRYVIDACHNTCL-RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
HEFLR++++A L R + + + + ++ + +IFGG L+S+V+C
Sbjct: 264 HEFLRFLVEAMERAYLMRFRNYKEL-----------DQLVKETTPLGQIFGGYLRSEVRC 312
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
L+C S D+ LDI + SL++A + F E L+ + YKC+ CKK VSA KQ
Sbjct: 313 LSCNHVSITFQHFQDLLLDIRKADSLEDAFEGHFSRERLE-DMGYKCEGCKKKVSATKQF 371
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCK--ASQDPQPEYKLFGTIV 302
S+ ++P L IQLKRF + G K+ K I+ + + LS + + A+Q Y+L +
Sbjct: 372 SLERAPITLCIQLKRFS-MIGNKLTKQISLKPRIDLSKYAARSPAAQAQPLTYRLVSMVT 430
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
H G S GHY A G +Y +DSYV +Q V + YI+F+
Sbjct: 431 HLGVSQHCGHYTAIGSTDTGSYYNFDDSYVRPIAMQSVCNTNAYIMFY 478
>gi|158285524|ref|XP_001687904.1| AGAP007521-PA [Anopheles gambiae str. PEST]
gi|157020033|gb|EDO64553.1| AGAP007521-PA [Anopheles gambiae str. PEST]
Length = 1219
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 169/326 (51%), Gaps = 24/326 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQ-HSSLCKQLTGDSALDAERKRECPFCIL 86
G+ N+GN+CYLNS LQ L + P +AN+ L + H + C D C C +
Sbjct: 220 GMMNMGNTCYLNSTLQALFHVPAIANWLLSDEPHRAKCD--------DGGSGGSCIICAM 271
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
K ++ S S + T P + S LR+ +H GRQEDAHEFLRY+++A + + K
Sbjct: 272 AKTLLESQS-NQTAFRPYLVYSKLRLVCKHLVPGRQEDAHEFLRYLVEAMEKSYIGRTKN 330
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
++ + + ++ + +I GG L+S+VKCL+C S D+ LDI
Sbjct: 331 SKEL----------DQYSKETTPLNQILGGYLRSEVKCLSCQHVSTTFQHFEDLLLDIRK 380
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ EA++ +F E L+ YKC+ CK+ V+A KQ S+ ++P +L +QLKRF + G
Sbjct: 381 ANSIDEALELYFARERLE-EMGYKCEACKRRVAATKQFSLERAPFVLCVQLKRFS-MLGA 438
Query: 267 KIDKAIAFEEVLVLSSFMCKA--SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRW 324
KI+K + L L+ + A S + Y+L + H G + GHY A G +
Sbjct: 439 KINKHVELRSKLDLTPYSSPAMRSNGGKLTYRLTSMVTHLGSTQHCGHYTAIGHTDAGGY 498
Query: 325 YCCNDSYVSVSTLQEVLSEKVYILFF 350
+ +DS V + V+S YILF+
Sbjct: 499 HVFDDSSVRPIGIHNVMSTNAYILFY 524
>gi|158285526|ref|XP_001237068.2| AGAP007521-PB [Anopheles gambiae str. PEST]
gi|157020034|gb|EAU77612.2| AGAP007521-PB [Anopheles gambiae str. PEST]
Length = 1053
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 169/326 (51%), Gaps = 24/326 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQ-HSSLCKQLTGDSALDAERKRECPFCIL 86
G+ N+GN+CYLNS LQ L + P +AN+ L + H + C D C C +
Sbjct: 174 GMMNMGNTCYLNSTLQALFHVPAIANWLLSDEPHRAKCD--------DGGSGGSCIICAM 225
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
K ++ S S + T P + S LR+ +H GRQEDAHEFLRY+++A + + K
Sbjct: 226 AKTLLESQS-NQTAFRPYLVYSKLRLVCKHLVPGRQEDAHEFLRYLVEAMEKSYIGRTKN 284
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
++ + + ++ + +I GG L+S+VKCL+C S D+ LDI
Sbjct: 285 SKEL----------DQYSKETTPLNQILGGYLRSEVKCLSCQHVSTTFQHFEDLLLDIRK 334
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ S+ EA++ +F E L+ YKC+ CK+ V+A KQ S+ ++P +L +QLKRF + G
Sbjct: 335 ANSIDEALELYFARERLE-EMGYKCEACKRRVAATKQFSLERAPFVLCVQLKRFS-MLGA 392
Query: 267 KIDKAIAFEEVLVLSSFMCKA--SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRW 324
KI+K + L L+ + A S + Y+L + H G + GHY A G +
Sbjct: 393 KINKHVELRSKLDLTPYSSPAMRSNGGKLTYRLTSMVTHLGSTQHCGHYTAIGHTDAGGY 452
Query: 325 YCCNDSYVSVSTLQEVLSEKVYILFF 350
+ +DS V + V+S YILF+
Sbjct: 453 HVFDDSSVRPIGIHNVMSTNAYILFY 478
>gi|358333533|dbj|GAA30868.2| ubiquitin carboxyl-terminal hydrolase 36/42 [Clonorchis sinensis]
Length = 835
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 190/411 (46%), Gaps = 43/411 (10%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFC-LKLQHSSLCKQLTGDSA---LDAERKREC 81
PLGL N GN+CYLNSVLQC T PL F + Q+ S C TG A + R C
Sbjct: 174 PLGLGNSGNTCYLNSVLQCFLATGPLVAFISTRHQNLSACTTTTGQFASVTTGVSKNRFC 233
Query: 82 PFCILEKRIVRSLS-------VDLTLDA-----PAKIQSCLRIFAEHFKCGRQEDAHEFL 129
C + + + S ++ A P+ +R + + +QEDAHEFL
Sbjct: 234 GLCGILRLLKEHNSSSQAPNGMNFGYSAGRHIIPSYFVGNVRAICPNLRPYQQEDAHEFL 293
Query: 130 RYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGA 189
L L R + G G ++V++ IFGG ++S+V C +C
Sbjct: 294 -------------LGLLSRMEDNTMAGFGKVSRAVAETNVIRRIFGGVVRSEVTCHSCRK 340
Query: 190 ESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQS 249
S + ++ ++S+DI N SL++ + + + E L G N YKC+NC++L +A ++ +I Q
Sbjct: 341 VSARDEQCFNLSMDITNGRSLQQCLFNYIRHEELCGQNAYKCENCRQLRAAVRRSTIFQG 400
Query: 250 PNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPD 309
IL+IQ RF K+D + F L FM ++ P Y+L+ T+ H G S
Sbjct: 401 APILIIQFNRFSR--NHKLDHRVEFPSSFNLRPFMTD-NKGPPVLYRLYATVNHEGHSCR 457
Query: 310 SGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRAN----QRPVSANGTFA 365
SGHY A+ + G WY NDS+V+ + + VL + Y+LF+ N RP A G
Sbjct: 458 SGHYVAFTRRN-GTWYSHNDSFVNSTNPEHVLRQAPYLLFYEAVNPTPAHRPQQAQGEMY 516
Query: 366 SNGVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKVEKVPS 416
S + + T+P+ + S T T+ + VP+
Sbjct: 517 SPTTTVKPD------TIPVTIPVDQIPLPTSNPPDLSSTTVTVHRPNAVPT 561
>gi|195427887|ref|XP_002062008.1| GK17299 [Drosophila willistoni]
gi|251765137|sp|B4MLR8.1|UBP36_DROWI RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|194158093|gb|EDW72994.1| GK17299 [Drosophila willistoni]
Length = 1311
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 122/356 (34%), Positives = 178/356 (50%), Gaps = 22/356 (6%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQ-HSSLCK-QLTGDSALDAERKRECPFCI 85
G+ N+GN+CYLNS LQ L + P LAN+ Q H C FCI
Sbjct: 213 GMINVGNTCYLNSTLQALFHIPALANWLNSEQSHLENCNIGGESGGGGGGGGGNNGGFCI 272
Query: 86 L--EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL-R 142
+ + ++S + + P I S L+ +H GRQEDAHEFLR++++A L R
Sbjct: 273 ICAMAKTLQSTQSNASAIRPYHIYSKLKQICKHMVIGRQEDAHEFLRFLVEAMEKAYLMR 332
Query: 143 LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISL 202
+ + + + ++ + +IFGG L+S+V+CL+C S D+ L
Sbjct: 333 YRNYKEL-----------DQLVKETTPLNQIFGGYLRSEVRCLSCNHVSITFQHFQDLLL 381
Query: 203 DILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEG 262
DI S +L EA +F E L+ + YKC+ CKK VSA KQ S+ ++P L IQLKRF
Sbjct: 382 DIRKSDTLDEAFDGYFSRERLE-DMGYKCEGCKKKVSATKQFSLQRAPITLCIQLKRFSM 440
Query: 263 IFGGKIDKAIAFEEVLVLSSFMCKA--SQDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKD 319
I G K+ K I+F+ + LS F ++ +Q P Y+L + H G S GHY A
Sbjct: 441 I-GNKLTKQISFKPRIDLSRFAARSPTAQGQLPLTYRLVSLVTHLGVSQHCGHYTAIGLT 499
Query: 320 AIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKSHENG 375
G +Y +DSYV +Q V S YI+F+ +P+ A NG++ NG
Sbjct: 500 ESGSYYNFDDSYVRPIAMQSVCSTNSYIMFYELDLNQPL-ATPANKLNGLRQLSNG 554
>gi|194750190|ref|XP_001957513.1| GF23992 [Drosophila ananassae]
gi|251765094|sp|B3M3M6.1|UBP36_DROAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|190624795|gb|EDV40319.1| GF23992 [Drosophila ananassae]
Length = 1091
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 168/327 (51%), Gaps = 26/327 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQ-HSSLCKQLTGDSALDAERKRECPFCIL 86
G+ N GN+CYLNS LQ L + P LAN+ + Q H C +E C C +
Sbjct: 177 GMINAGNTCYLNSTLQALFHIPALANWLVSEQAHMENCNV--------SESGSFCIICAM 228
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL-RLKK 145
K + + + + P I + L+ +H GRQEDAHEFLR++++A L R +
Sbjct: 229 AKTLQATQTTQSAVR-PFLIYTKLKQICKHMIVGRQEDAHEFLRFLVEAMERAYLMRFRN 287
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
+ + + ++ + +IFGG L+S+V+CL+C S D+ LDI
Sbjct: 288 YKEL-----------DQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIR 336
Query: 206 NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFG 265
S SL+EA + +F E L+ + YKC+ CKK VSA KQ + ++P L IQLKRF + G
Sbjct: 337 KSDSLEEAFEGYFSREKLE-DFGYKCEGCKKKVSATKQFRLERAPITLCIQLKRFS-MMG 394
Query: 266 GKIDKAIAFEEVLVLSSFMCKA-SQDPQPE-YKLFGTIVHSGFSPDSGHYYAYIKDAIGR 323
K+ K I F+ + LS F ++ + QP Y+L + H G S GHY A G
Sbjct: 395 NKLTKQITFKPRIDLSKFAARSPAASVQPLIYRLVSMVTHLGVSQHCGHYTAIGSTEAGS 454
Query: 324 WYCCNDSYVSVSTLQEVLSEKVYILFF 350
+Y +DSYV +Q V + YI+F+
Sbjct: 455 YYNFDDSYVRPIAIQSVCNTNAYIMFY 481
>gi|426358873|ref|XP_004046714.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Gorilla gorilla gorilla]
Length = 362
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 156/298 (52%), Gaps = 31/298 (10%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+ N+CY+N+ LQCLTYTPPL N L +HS C +R + C C ++
Sbjct: 81 GLQNMENTCYVNASLQCLTYTPPLDNCMLSREHSQTC-----------QRHKCCMICTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I +L + P++ A F+ G QE+A EFL + +DA +KK
Sbjct: 130 AHITWALHSLGHVIQPSQA------LAAGFRRGNQENAREFLMFTVDA-------MKKAF 176
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G T+ + +IFGG +SQ+KCL C S D +DI+LDI +
Sbjct: 177 LPGHKQVDHHSKDTTL------IHQIFGGYWRSQIKCLHCHGISETFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+K+A+ + +PE L+G N Y C C + A K +++ S +L++ LKRF + G K
Sbjct: 231 QSVKQALGQLVKPEELNGENDYHCGLCLQRAPASKMLTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
+ K + + E + + ++ + + P Y L+ +VH+G+S GHY++Y+K G+WY
Sbjct: 291 LAKNVQYPECVDMQPYVYQQNTGPL-VYVLYAVLVHAGWSCHYGHYFSYVKAQEGQWY 347
>gi|195014496|ref|XP_001984029.1| GH16215 [Drosophila grimshawi]
gi|251765096|sp|B4IXE0.1|UBP36_DROGR RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|193897511|gb|EDV96377.1| GH16215 [Drosophila grimshawi]
Length = 1240
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 124/380 (32%), Positives = 195/380 (51%), Gaps = 34/380 (8%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK 65
+++ W+ S E++ + G G+ N+GN+CYLNS LQ L + P LAN+ + S
Sbjct: 186 HIRIGWKQS---ERKWQVG--TGMLNVGNTCYLNSSLQALFHIPSLANWLV-----SESA 235
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
L + ++ C C + K ++S + + P I S LR +H GRQEDA
Sbjct: 236 HLENCNISESCGSNGCIICAMAK-TLQSTQSNQSAVRPFLIYSKLRQICKHMVVGRQEDA 294
Query: 126 HEFLRYVIDACHNTCL-RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
HEFLR++I+A L R + + + + ++ + +IFGG L+S+V+C
Sbjct: 295 HEFLRFLIEAMEKAYLMRFRNYKEL-----------DQLVKETTPLNQIFGGYLRSEVRC 343
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
L+C S D+ LDI S +L++A +F E L+ + YKC+ CKK VSA KQ
Sbjct: 344 LSCNHVSITFQHFQDLLLDIRKSDTLEDAFDGYFSRERLE-DMGYKCEGCKKKVSATKQF 402
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKA-SQDPQP-EYKLFGTIV 302
S+ ++P L IQLKRF + G K+ K I+F+ + LS F ++ + QP Y+L +
Sbjct: 403 SLERAPITLCIQLKRFS-MMGNKLTKQISFKPRIDLSRFAARSPTAAAQPLSYRLVSMVT 461
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANG 362
H G S GHY A G +Y +DS V +Q V + YI+F+ + V+ NG
Sbjct: 462 HLGVSQHCGHYTAIGLTETGSYYNFDDSCVRPIAMQSVCNTNAYIMFY----ELDVNGNG 517
Query: 363 TFAS---NGVKSHENGKEAY 379
+ NG++ NG + +
Sbjct: 518 HVVAPKMNGMRLTTNGGQQH 537
>gi|386770655|ref|NP_001246639.1| scrawny, isoform G [Drosophila melanogaster]
gi|386770657|ref|NP_001246640.1| scrawny, isoform H [Drosophila melanogaster]
gi|383291776|gb|AFH04310.1| scrawny, isoform G [Drosophila melanogaster]
gi|383291777|gb|AFH04311.1| scrawny, isoform H [Drosophila melanogaster]
Length = 976
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 180/348 (51%), Gaps = 31/348 (8%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQ-HSSLCK 65
+++ W+ SE++ + G G+ N+GN+CYLNS LQ L + P LAN+ + Q H + C
Sbjct: 157 IRIGWK---QSERKWQVG--TGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCN 211
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
AE C C + K ++ + S + + P I S L+ +H GRQEDA
Sbjct: 212 V--------AEPGSGCIICAMTKTLLATQS-NQSAVRPFLIYSKLKQICKHMVVGRQEDA 262
Query: 126 HEFLRYVIDACHNTCL-RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
HEFLR++++A L R + + + + ++ + +IFGG L+S+V+C
Sbjct: 263 HEFLRFLVEAMERAYLMRFRNYKEL-----------DQLVKETTPLGQIFGGYLRSEVRC 311
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
L+C S D+ LDI + SL++A + F E L+ + YKC+ CKK VSA KQ
Sbjct: 312 LSCNHVSITFQHFQDLLLDIRKADSLEDAFEGHFSRERLE-DMGYKCEGCKKKVSATKQF 370
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP--EYKLFGTIV 302
S+ ++P L IQLKRF + G K+ K I+F+ + LS + ++ Y+L +
Sbjct: 371 SLERAPITLCIQLKRF-SMIGNKLTKQISFKSRIDLSKYAARSQAAQAQPLTYRLVSMVT 429
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
H G S GHY A G +Y +DSYV + V + YI+FF
Sbjct: 430 HLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCNTNAYIMFF 477
>gi|255573501|ref|XP_002527676.1| conserved hypothetical protein [Ricinus communis]
gi|223532981|gb|EEF34747.1| conserved hypothetical protein [Ricinus communis]
Length = 753
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 183/337 (54%), Gaps = 30/337 (8%)
Query: 24 GPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPF 83
G GL NLGN+C++N+VLQ T+T PL H C++ G C
Sbjct: 177 GVAAGLYNLGNTCFINAVLQSFTHTVPLVKALRSCNHVMPCQR--GVEGF-------CAV 227
Query: 84 CILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
C L I SL+ +P+KI L+ + F+ +QEDAHEFL+ ++D CL
Sbjct: 228 CALRDHIELSLTSSGKAVSPSKIVDNLKQISSCFEKYQQEDAHEFLQCLLDKLERCCL-- 285
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
G S E +++V+ +FGG L S+++C CG S+K + ++D+SL+
Sbjct: 286 -----DPGLSDEASSSPE-----NNIVERVFGGRLVSKLRCCNCGHCSDKYEPLIDLSLE 335
Query: 204 ILNSCSLKEAMQKFFQPE-VLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF-- 260
I + +L+ A++ F + E + D ++K+ C++CK+ S KQ+ + Q+P++ + LKRF
Sbjct: 336 IEDVGNLQSALESFTKVEKIEDVDSKFICNHCKEEGSREKQLMLDQAPSVSALHLKRFKT 395
Query: 261 EGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP-----EYKLFGTIVHSGFSPDSGHYYA 315
+G F KIDK + F L L + K+SQD +Y+L+ +VH+G SP SGHY+
Sbjct: 396 DGSFIEKIDKHVEFPLELNLKPYT-KSSQDCNKNQVDLKYQLYAIVVHNGLSPTSGHYFC 454
Query: 316 YIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+++ + W+ +D V +EVLS+ YILF++R
Sbjct: 455 FVRSSPSTWHKLDDCRVVKVEEEEVLSQAAYILFYVR 491
>gi|74870609|sp|Q9VRP5.2|UBP36_DROME RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
Length = 1085
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 180/348 (51%), Gaps = 31/348 (8%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQ-HSSLCK 65
+++ W+ SE++ + G G+ N+GN+CYLNS LQ L + P LAN+ + Q H + C
Sbjct: 157 IRIGWK---QSERKWQVG--TGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCN 211
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
AE C C + K ++ + S + + P I S L+ +H GRQEDA
Sbjct: 212 V--------AEPGSGCIICAMTKTLLATQS-NQSAVRPFLIYSKLKQICKHMVVGRQEDA 262
Query: 126 HEFLRYVIDACHNTCL-RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
HEFLR++++A L R + + + + ++ + +IFGG L+S+V+C
Sbjct: 263 HEFLRFLVEAMERAYLMRFRNYKEL-----------DQLVKETTPLGQIFGGYLRSEVRC 311
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
L+C S D+ LDI + SL++A + F E L+ + YKC+ CKK VSA KQ
Sbjct: 312 LSCNHVSITFQHFQDLLLDIRKADSLEDAFEGHFSRERLE-DMGYKCEGCKKKVSATKQF 370
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP--EYKLFGTIV 302
S+ ++P L IQLKRF + G K+ K I+F+ + LS + ++ Y+L +
Sbjct: 371 SLERAPITLCIQLKRFS-MIGNKLTKQISFKSRIDLSKYAARSQAAQAQPLTYRLVSMVT 429
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
H G S GHY A G +Y +DSYV + V + YI+FF
Sbjct: 430 HLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCNTNAYIMFF 477
>gi|9758368|dbj|BAB08869.1| unnamed protein product [Arabidopsis thaliana]
Length = 829
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 180/387 (46%), Gaps = 79/387 (20%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C+LNSVLQCLTYT PLA H C + G C C ++
Sbjct: 108 GLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKYC-HVAGF----------CALCAIQ 156
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
K + + + + AP + S LR + +F+ RQEDAHE++ +++ H L
Sbjct: 157 KHVRTARQANGRILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMHKCSL------ 210
Query: 148 RKGGGSSGGGGGGETING-GSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
G E+ + S+V +IFGG+L+SQ
Sbjct: 211 -------PSGVPSESSDAYRRSLVHKIFGGSLRSQ------------------------- 238
Query: 207 SCSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFG 265
A+ +F E+LD K Y+C+ CK+ V A+KQ+++ ++P +L + LKRFE
Sbjct: 239 -----RALSRFTAVELLDNGAKVYQCERCKQKVKAKKQLTVSKAPYVLTVHLKRFEAHRS 293
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KID+ + F + + F+ + +Y L+G +VH G S SGHY +++ + G WY
Sbjct: 294 EKIDRKVDFTSAIDMKPFVS-GPHEGNLKYTLYGVLVHYGRSSHSGHYACFVRTSSGMWY 352
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANG-------TFASN--------GVK 370
+D+ V + + V ++K Y+LF++R Q V N +FA+N +K
Sbjct: 353 SLDDNRVVQVSEKTVFNQKAYMLFYVRDRQNAVPKNSVPVVKKESFATNRASLIVASNIK 412
Query: 371 SHENGKEAYKG-------VKGTVPLKA 390
NG K G PLK+
Sbjct: 413 DQVNGSTVIKECGFGALVANGLAPLKS 439
>gi|54038146|gb|AAH84261.1| Usp36 protein [Xenopus laevis]
Length = 345
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 143/270 (52%), Gaps = 32/270 (11%)
Query: 4 AHELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSL 63
A +L M W ++ R G GL+NLGN+C+LN+ +QCLTYTPPLAN+ L +H+S
Sbjct: 105 ADKLSMKW------DRISRVGA--GLQNLGNTCFLNATVQCLTYTPPLANYLLSKEHTSN 156
Query: 64 CKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQE 123
C+Q C CI++ +++ + P L+ A HF+ G QE
Sbjct: 157 CQQ-----------SGFCMLCIMQNHLIQVFANSGNNVKPVSFIRELKRIARHFRFGSQE 205
Query: 124 DAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVK 183
DAHEFLRY IDA CL G + + +S+V +IFGG L+S+V
Sbjct: 206 DAHEFLRYTIDAMQKACL-------------NGYARLDRHSQATSLVHQIFGGYLRSRVT 252
Query: 184 CLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C C S+ D +DI+L+I N ++ A++ F + ++L G N Y C CKK V A K+
Sbjct: 253 CSICKNVSDTYDPYLDIALEIRNVPNIVCALEMFVKSDILSGENAYMCARCKKKVPASKR 312
Query: 244 MSILQSPNILVIQLKRFEGIFGGKIDKAIA 273
S+ + N+L + LKRF GGKI K +
Sbjct: 313 FSVHRDSNVLTLSLKRFANSSGGKITKLVT 342
>gi|426358881|ref|XP_004046718.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Gorilla gorilla gorilla]
Length = 414
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 152/280 (54%), Gaps = 20/280 (7%)
Query: 76 ERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDA 135
R + C C ++ I R+L P + + A F G+QEDAHEFL + +DA
Sbjct: 2 HRHKGCMLCTMQAHITRALY------RPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDA 55
Query: 136 CHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVD 195
CL G + + ++++ +IFGG +SQ+KCL C S+ D
Sbjct: 56 MKKACL-------------PGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFD 102
Query: 196 EIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVI 255
+DI+LDI + S+K+A+++ +PE L+G N Y C C + A K +++ S +L++
Sbjct: 103 PYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQKAPASKTLTLHTSAKVLIL 162
Query: 256 QLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYA 315
LKRF + G K+ K + + E L + +M + + P Y L+ +VH+G+ +GHY++
Sbjct: 163 VLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLV-YVLYAVLVHAGWICHNGHYFS 221
Query: 316 YIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQ 355
Y+K G+WY +D+ V+ S + LS++ Y+LF+I+ ++
Sbjct: 222 YVKAQEGQWYKMDDAEVTASGITSALSQQAYVLFYIQKSE 261
>gi|442630418|ref|NP_729093.2| scrawny, isoform I [Drosophila melanogaster]
gi|440215342|gb|AAN12108.2| scrawny, isoform I [Drosophila melanogaster]
Length = 886
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 180/348 (51%), Gaps = 31/348 (8%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQ-HSSLCK 65
+++ W+ SE++ + G G+ N+GN+CYLNS LQ L + P LAN+ + Q H + C
Sbjct: 67 IRIGWK---QSERKWQVG--TGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCN 121
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
AE C C + K ++ + S + + P I S L+ +H GRQEDA
Sbjct: 122 V--------AEPGSGCIICAMTKTLLATQS-NQSAVRPFLIYSKLKQICKHMVVGRQEDA 172
Query: 126 HEFLRYVIDACHNTCL-RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
HEFLR++++A L R + + + + ++ + +IFGG L+S+V+C
Sbjct: 173 HEFLRFLVEAMERAYLMRFRNYKEL-----------DQLVKETTPLGQIFGGYLRSEVRC 221
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
L+C S D+ LDI + SL++A + F E L+ + YKC+ CKK VSA KQ
Sbjct: 222 LSCNHVSITFQHFQDLLLDIRKADSLEDAFEGHFSRERLE-DMGYKCEGCKKKVSATKQF 280
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP--EYKLFGTIV 302
S+ ++P L IQLKRF + G K+ K I+F+ + LS + ++ Y+L +
Sbjct: 281 SLERAPITLCIQLKRF-SMIGNKLTKQISFKSRIDLSKYAARSQAAQAQPLTYRLVSMVT 339
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
H G S GHY A G +Y +DSYV + V + YI+FF
Sbjct: 340 HLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCNTNAYIMFF 387
>gi|24658617|ref|NP_729092.1| scrawny, isoform D [Drosophila melanogaster]
gi|23094118|gb|AAN12107.1| scrawny, isoform D [Drosophila melanogaster]
gi|209447207|gb|ACI47091.1| FI06147p [Drosophila melanogaster]
Length = 1038
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 180/348 (51%), Gaps = 31/348 (8%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQ-HSSLCK 65
+++ W+ SE++ + G G+ N+GN+CYLNS LQ L + P LAN+ + Q H + C
Sbjct: 157 IRIGWK---QSERKWQVG--TGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCN 211
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
AE C C + K ++ + S + + P I S L+ +H GRQEDA
Sbjct: 212 V--------AEPGSGCIICAMTKTLLATQS-NQSAVRPFLIYSKLKQICKHMVVGRQEDA 262
Query: 126 HEFLRYVIDACHNTCL-RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
HEFLR++++A L R + + + + ++ + +IFGG L+S+V+C
Sbjct: 263 HEFLRFLVEAMERAYLMRFRNYKEL-----------DQLVKETTPLGQIFGGYLRSEVRC 311
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
L+C S D+ LDI + SL++A + F E L+ + YKC+ CKK VSA KQ
Sbjct: 312 LSCNHVSITFQHFQDLLLDIRKADSLEDAFEGHFSRERLE-DMGYKCEGCKKKVSATKQF 370
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP--EYKLFGTIV 302
S+ ++P L IQLKRF + G K+ K I+F+ + LS + ++ Y+L +
Sbjct: 371 SLERAPITLCIQLKRFS-MIGNKLTKQISFKSRIDLSKYAARSQAAQAQPLTYRLVSMVT 429
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
H G S GHY A G +Y +DSYV + V + YI+FF
Sbjct: 430 HLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCNTNAYIMFF 477
>gi|28416398|gb|AAO42671.1| AT31021p [Drosophila melanogaster]
Length = 1038
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 180/348 (51%), Gaps = 31/348 (8%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQ-HSSLCK 65
+++ W+ SE++ + G G+ N+GN+CYLNS LQ L + P LAN+ + Q H + C
Sbjct: 157 IRIGWK---QSERKWQVG--TGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCN 211
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
AE C C + K ++ + S + + P I S L+ +H GRQEDA
Sbjct: 212 V--------AEPGSGCIICAMTKTLLATQS-NQSAVRPFLIYSKLKQICKHMVVGRQEDA 262
Query: 126 HEFLRYVIDACHNTCL-RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
HEFLR++++A L R + + + + ++ + +IFGG L+S+V+C
Sbjct: 263 HEFLRFLVEAMERAYLMRFRNYKEL-----------DQLVKETTPLGQIFGGYLRSEVRC 311
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
L+C S D+ LDI + SL++A + F E L+ + YKC+ CKK VSA KQ
Sbjct: 312 LSCNHVSITFQHFQDLLLDIRKADSLEDAFEGHFSRERLE-DMGYKCEGCKKKVSATKQF 370
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP--EYKLFGTIV 302
S+ ++P L IQLKRF + G K+ K I+F+ + LS + ++ Y+L +
Sbjct: 371 SLERAPITLCIQLKRFS-MIGNKLTKQISFKSRIDLSKYAARSQAAQAQPLTYRLVSMVT 429
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
H G S GHY A G +Y +DSYV + V + YI+FF
Sbjct: 430 HLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCNTNAYIMFF 477
>gi|357517045|ref|XP_003628811.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355522833|gb|AET03287.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 737
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 177/327 (54%), Gaps = 39/327 (11%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
G+ N+GN+C+++++LQC T+T + H+S C D E C C
Sbjct: 213 GITNMGNTCFMSAILQCFTHTVQMFLGLRYCTHASSC---------DVEGF--CVICAFR 261
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ +L + P ++ L F+ F G QEDAHEF++Y L KL+
Sbjct: 262 DHLDDALERSRSPIVPRELVKNLNYFSAGFVIGNQEDAHEFMQYA----------LNKLK 311
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
R G GE +++ +IFGG L S+++C CG S+K + ++D+SL+I +
Sbjct: 312 R-------GFPVGE-----ENLIDQIFGGRLVSKLRCCCCGHSSDKFEPLIDMSLEIEHV 359
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF--EGIFG 265
++++A++ F + E +DG K+ C +C + V+ KQ+ + ++P++ LKRF +G
Sbjct: 360 STIQQALESFTKVEKMDG--KFICSDCNQEVTMEKQLMLDKAPSVAAFHLKRFLKDGDSV 417
Query: 266 GKIDKAIAFEEVLVLSSFMCKAS--QDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR 323
KIDK + F + L L + C +S + +Y+L+ + H G SP+SGHY+++++ A +
Sbjct: 418 KKIDKYVDFSKELDLKPYTCGSSSGDNVLLKYELYAVVEHRGPSPNSGHYFSFVRSAPDK 477
Query: 324 WYCCNDSYVSVSTLQEVLSEKVYILFF 350
WY +D VS + +EVL+ K YILF+
Sbjct: 478 WYLMDDDKVSSVSEEEVLNRKAYILFY 504
>gi|224126461|ref|XP_002329560.1| predicted protein [Populus trichocarpa]
gi|222870269|gb|EEF07400.1| predicted protein [Populus trichocarpa]
Length = 809
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 173/329 (52%), Gaps = 27/329 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N GN+CY+N+VLQC T+T PL H+ C+ + C C++
Sbjct: 264 GLFNKGNTCYINAVLQCFTHTVPLVQALRSCNHAMPCRT-----------EGFCALCVIR 312
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I SL+ + P K+ + L + F+ +QEDAHEFL+ +++ +CL
Sbjct: 313 DHIELSLASSGKILEPLKLVNNLDSISSFFRRYQQEDAHEFLQCLLERLERSCL------ 366
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+ + ++V+ +FGG L S+++C CG S+K + ++D+SL+I ++
Sbjct: 367 ------DSSLTDDISSSQDKNIVERVFGGRLVSKLRCCNCGHFSDKYEPLIDLSLEIEDA 420
Query: 208 CSLKEAMQKFFQPE-VLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF--EGIF 264
+L+ A++ F E + D K+ C+NCK+ VS KQ+ + ++P+I + LKRF +G
Sbjct: 421 DTLQIALESFTNVEKIEDSETKFTCENCKEEVSREKQLMLDKAPSIAALHLKRFKIDGTS 480
Query: 265 GGKIDKAIAFEEVLVLSSFMC-KASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR 323
KI K + F L L ++ S D +Y+L+ +VH G+S SGHY YI+ +
Sbjct: 481 VEKIGKHVEFPLELDLKPYINDNDSNDVGFKYQLYAVVVHKGYSLTSGHYVCYIRSSPDT 540
Query: 324 WYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
W+ +D VS + VLS+ YILF+ R
Sbjct: 541 WHKLDDPEVSKEREEFVLSQAAYILFYAR 569
>gi|442630420|ref|NP_647986.3| scrawny, isoform J [Drosophila melanogaster]
gi|440215343|gb|AAN12110.2| scrawny, isoform J [Drosophila melanogaster]
Length = 906
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 180/348 (51%), Gaps = 31/348 (8%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQ-HSSLCK 65
+++ W+ SE++ + G G+ N+GN+CYLNS LQ L + P LAN+ + Q H + C
Sbjct: 87 IRIGWK---QSERKWQVG--TGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCN 141
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
AE C C + K ++ + S + + P I S L+ +H GRQEDA
Sbjct: 142 V--------AEPGSGCIICAMTKTLLATQS-NQSAVRPFLIYSKLKQICKHMVVGRQEDA 192
Query: 126 HEFLRYVIDACHNTCL-RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
HEFLR++++A L R + + + + ++ + +IFGG L+S+V+C
Sbjct: 193 HEFLRFLVEAMERAYLMRFRNYKEL-----------DQLVKETTPLGQIFGGYLRSEVRC 241
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
L+C S D+ LDI + SL++A + F E L+ + YKC+ CKK VSA KQ
Sbjct: 242 LSCNHVSITFQHFQDLLLDIRKADSLEDAFEGHFSRERLE-DMGYKCEGCKKKVSATKQF 300
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP--EYKLFGTIV 302
S+ ++P L IQLKRF I G K+ K I+F+ + LS + ++ Y+L +
Sbjct: 301 SLERAPITLCIQLKRFSMI-GNKLTKQISFKSRIDLSKYAARSQAAQAQPLTYRLVSMVT 359
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
H G S GHY A G +Y +DSYV + V + YI+FF
Sbjct: 360 HLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCNTNAYIMFF 407
>gi|91078882|ref|XP_972954.1| PREDICTED: similar to Ubiquitin-specific protease 36 CG5505-PA
[Tribolium castaneum]
gi|270003709|gb|EFA00157.1| hypothetical protein TcasGA2_TC002978 [Tribolium castaneum]
Length = 739
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/338 (33%), Positives = 170/338 (50%), Gaps = 25/338 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLK-LQHSSLCKQLTGDSALDAERKRECPFCIL 86
G+ N+GN+CYLNS LQ L + P L N+ + +H++ C+ G C C +
Sbjct: 112 GMINMGNTCYLNSTLQALFHVPALVNWLISDKEHTAECQDSGG----------LCIICAM 161
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
K + S + P I + LR+ + GRQEDAHEFLRY+++A + L
Sbjct: 162 RKTLQDSQQRNTNTIRPLLIYNKLRLVCRNLIPGRQEDAHEFLRYLVEAMEKSYLS---- 217
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
R S ET + + +I GG L+S V+CL CG S D+ LDI
Sbjct: 218 -RFKNHSEFDSKVKET-----TPLNQILGGYLRSAVRCLKCGHVSTTFQHFQDLLLDIRK 271
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ +L EA++ +F E LD ++ Y C +C+K V A KQ S+ ++P +L IQLKRF +
Sbjct: 272 AQTLDEALEGYFSREKLD-DDSYHCQSCQKKVPATKQFSLERAPMVLCIQLKRF-SVSNN 329
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K I F + L L+ + P Y+L + H G + + GHY A + G +Y
Sbjct: 330 KITKHIHFRQRLDLTRYARHRPSVPL-IYRLVALVTHMGPTVNCGHYTAVAQAPSGNFYQ 388
Query: 327 CNDSYVSVSTLQEVLSEKVYILFF-IRANQRPVSANGT 363
+DS V V + Q V + YI+ + + ++ S NGT
Sbjct: 389 FDDSMVRVISHQAVFNTNAYIMLYELESSPFTKSNNGT 426
>gi|33589646|gb|AAQ22589.1| AT24152p [Drosophila melanogaster]
Length = 948
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 180/348 (51%), Gaps = 31/348 (8%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQ-HSSLCK 65
+++ W+ SE++ + G G+ N+GN+CYLNS LQ L + P LAN+ + Q H + C
Sbjct: 67 IRIGWK---QSERKWQVG--TGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCN 121
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
AE C C + K ++ + S + + P I S L+ +H GRQEDA
Sbjct: 122 V--------AEPGSGCIICAMTKTLLATQS-NQSAVRPFLIYSKLKQICKHMVVGRQEDA 172
Query: 126 HEFLRYVIDACHNTCL-RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
HEFLR++++A L R + + + + ++ + +IFGG L+S+V+C
Sbjct: 173 HEFLRFLVEAMERAYLMRFRNYKEL-----------DQLVKETTPLGQIFGGYLRSEVRC 221
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
L+C S D+ LDI + SL++A + F E L+ + YKC+ CKK VSA KQ
Sbjct: 222 LSCNHVSITFQHFQDLLLDIRKADSLEDAFEGHFSRERLE-DMGYKCEGCKKKVSATKQF 280
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP--EYKLFGTIV 302
S+ ++P L IQLKRF + G K+ K I+F+ + LS + ++ Y+L +
Sbjct: 281 SLERAPITLCIQLKRF-SMIGNKLTKQISFKSRIDLSKYAARSQAAQAQPLTYRLVSMVT 339
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
H G S GHY A G +Y +DSYV + V + YI+FF
Sbjct: 340 HLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCNTNAYIMFF 387
>gi|24658632|ref|NP_729094.1| scrawny, isoform C [Drosophila melanogaster]
gi|23094120|gb|AAN12109.1| scrawny, isoform C [Drosophila melanogaster]
Length = 948
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 180/348 (51%), Gaps = 31/348 (8%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQ-HSSLCK 65
+++ W+ SE++ + G G+ N+GN+CYLNS LQ L + P LAN+ + Q H + C
Sbjct: 67 IRIGWK---QSERKWQVG--TGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCN 121
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
AE C C + K ++ + S + + P I S L+ +H GRQEDA
Sbjct: 122 V--------AEPGSGCIICAMTKTLLATQS-NQSAVRPFLIYSKLKQICKHMVVGRQEDA 172
Query: 126 HEFLRYVIDACHNTCL-RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
HEFLR++++A L R + + + + ++ + +IFGG L+S+V+C
Sbjct: 173 HEFLRFLVEAMERAYLMRFRNYKEL-----------DQLVKETTPLGQIFGGYLRSEVRC 221
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
L+C S D+ LDI + SL++A + F E L+ + YKC+ CKK VSA KQ
Sbjct: 222 LSCNHVSITFQHFQDLLLDIRKADSLEDAFEGHFSRERLE-DMGYKCEGCKKKVSATKQF 280
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP--EYKLFGTIV 302
S+ ++P L IQLKRF + G K+ K I+F+ + LS + ++ Y+L +
Sbjct: 281 SLERAPITLCIQLKRF-SMIGNKLTKQISFKSRIDLSKYAARSQAAQAQPLTYRLVSMVT 339
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
H G S GHY A G +Y +DSYV + V + YI+FF
Sbjct: 340 HLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCNTNAYIMFF 387
>gi|24658645|ref|NP_729095.1| scrawny, isoform B [Drosophila melanogaster]
gi|15292143|gb|AAK93340.1| LD40339p [Drosophila melanogaster]
gi|23094122|gb|AAN12111.1| scrawny, isoform B [Drosophila melanogaster]
gi|220947254|gb|ACL86170.1| Usp36-PB [synthetic construct]
Length = 968
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 180/348 (51%), Gaps = 31/348 (8%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQ-HSSLCK 65
+++ W+ SE++ + G G+ N+GN+CYLNS LQ L + P LAN+ + Q H + C
Sbjct: 87 IRIGWK---QSERKWQVG--TGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCN 141
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
AE C C + K ++ + S + + P I S L+ +H GRQEDA
Sbjct: 142 V--------AEPGSGCIICAMTKTLLATQS-NQSAVRPFLIYSKLKQICKHMVVGRQEDA 192
Query: 126 HEFLRYVIDACHNTCL-RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
HEFLR++++A L R + + + + ++ + +IFGG L+S+V+C
Sbjct: 193 HEFLRFLVEAMERAYLMRFRNYKEL-----------DQLVKETTPLGQIFGGYLRSEVRC 241
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
L+C S D+ LDI + SL++A + F E L+ + YKC+ CKK VSA KQ
Sbjct: 242 LSCNHVSITFQHFQDLLLDIRKADSLEDAFEGHFSRERLE-DMGYKCEGCKKKVSATKQF 300
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP--EYKLFGTIV 302
S+ ++P L IQLKRF I G K+ K I+F+ + LS + ++ Y+L +
Sbjct: 301 SLERAPITLCIQLKRFSMI-GNKLTKQISFKSRIDLSKYAARSQAAQAQPLTYRLVSMVT 359
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
H G S GHY A G +Y +DSYV + V + YI+FF
Sbjct: 360 HLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCNTNAYIMFF 407
>gi|312379746|gb|EFR25927.1| hypothetical protein AND_08313 [Anopheles darlingi]
Length = 1237
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 119/363 (32%), Positives = 178/363 (49%), Gaps = 42/363 (11%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLK-LQHSSLCKQLTGDSALDAERKRECPFCIL 86
G+ N+GN+CYLNS LQ L + P +AN+ + +QH + C D C C +
Sbjct: 290 GMINMGNTCYLNSTLQALFHVPAIANWLVSDVQHRARCD--------DGGSGGSCIICAM 341
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL-RLKK 145
K ++ S S + P + S LR+ +H GRQEDAHEFLRY+++A + L R K
Sbjct: 342 AKTLLDSQSNQSAIK-PHLVYSKLRLVCKHLVPGRQEDAHEFLRYLVEAMEKSFLGRYKN 400
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
+ + + ++ + +I GG L+S+VKCL+C S D+ LDI
Sbjct: 401 SKEL-----------DQYSKETTPLNQILGGYLRSEVKCLSCHHISTTFQHFEDLLLDIR 449
Query: 206 NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFG 265
+ S+ EA++ +F E L+ Y C+ CKK V+A KQ S+ + P +L +QLKRF I G
Sbjct: 450 RANSIDEALKLYFDRERLE-ELSYNCEACKKRVAATKQFSLERVPFVLCVQLKRFT-ING 507
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDPQP-----------EYKLFGTIVHSGFSPDSGHYY 314
KI+K + L L+ + +SQ Q Y+L + H G S GHY
Sbjct: 508 TKINKHVELRSQLDLTPYSSSSSQQQQQRTSGSSSAGKLTYRLTSMVTHLGTSQHCGHYT 567
Query: 315 AYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSA-----NGTFASNGV 369
A + G ++ +DS V + V+S YILF+ P A NGT +N +
Sbjct: 568 AIGQTEGGAYHVFDDSSVRPVGMHNVMSTNAYILFYEL--DSPAGAAVGLLNGTTKANQI 625
Query: 370 KSH 372
H
Sbjct: 626 AGH 628
>gi|84995308|ref|XP_952376.1| ubiquitin carboxy-terminal hydrolase [Theileria annulata strain
Ankara]
gi|65302537|emb|CAI74644.1| ubiquitin carboxy-terminal hydrolase, putative [Theileria annulata]
Length = 632
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/366 (32%), Positives = 180/366 (49%), Gaps = 32/366 (8%)
Query: 2 GLAHELQMSWQPSLLSEKRKRGGPPLGLRNLG-NSCYLNSVLQCLTYTPPLANFCLKLQH 60
G+ H ++ W E G GL N G N CY+N ++Q LT+TP LA+ LK H
Sbjct: 64 GIYHLPKVKWD----DESMTMGA---GLNNPGINICYMNVIIQVLTHTPFLASSLLKSYH 116
Query: 61 SSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCG 120
S C L E+ C C+ E + +S + L+ P + FK G
Sbjct: 117 SKTC--------LHYEKDIFCIMCLFENYVKKSFASPNPLNNPF-YSIAKKFIWSRFKLG 167
Query: 121 RQEDAHEFLRYVIDACHNTC-LRLKKLRRKGGGSSGGGGGGETINGG---SSVVKEIFGG 176
Q+DA FL++ +D+ C L K+ ++ GS G + I+ S+V+ +FGG
Sbjct: 168 HQDDAFIFLKHFLDSLSKACYLNSKESEKQEDGSETTSGPKDFISNDQIMSTVIGRLFGG 227
Query: 177 ALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKK 236
++ + C C +S KV+E D+++++ S L + + +F PE L +NKY C NCK
Sbjct: 228 YFRNVIVCNNCSRKSEKVEEFFDLAVEVTKSNRLIDLLSEFVLPEKLTNDNKYFCSNCKS 287
Query: 237 LVSARKQMSILQSPNILVIQLKRFE---GIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 293
+A K +SI ++P IL I LKRF ++ + KAI F ++L +S K S+D
Sbjct: 288 YQNANKSLSIYKAPRILNINLKRFNLYSSVYKKSL-KAIEFPQLLSIS---LKTSEDSYT 343
Query: 294 --EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK--VYILF 349
Y L+ + H G S GHY +IK G WY +DS + + VLS VY+LF
Sbjct: 344 WLNYDLYAIVCHIGKSLHMGHYITFIKGKHGFWYRFDDSIIQCVSESTVLSHNNDVYLLF 403
Query: 350 FIRANQ 355
+ N+
Sbjct: 404 YSINNE 409
>gi|413938346|gb|AFW72897.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 531
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 163/325 (50%), Gaps = 31/325 (9%)
Query: 39 NSVLQCLTYTPPLANFCLKL---QHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLS 95
N+ LQC+T+T PL LKL H + C C FC L++ + S+
Sbjct: 5 NATLQCITHTVPLF---LKLCSNDHFTPCSY---------NEDGFCSFCALKEHVDESIR 52
Query: 96 VDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSG 155
++ AP K + LR + F G+QEDAHEFLR ++D H L K K GSS
Sbjct: 53 RSGSVIAPTKFRDSLRKLSLDFTPGQQEDAHEFLRCLLDNLHECTLDPKS---KSKGSSF 109
Query: 156 GGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQ 215
S+VKEIFGG L+S + C CG S + +D+SL+I L +A+Q
Sbjct: 110 ---------EEESIVKEIFGGQLKSHLSCCECGHSSETFEPFLDLSLEIDQVDHLVDALQ 160
Query: 216 KFFQPE-VLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG--KIDKAI 272
F + E V D NK C++C V KQ+++ ++P+++ LKRF + KIDK +
Sbjct: 161 SFTKVEQVGDSENKLTCESCNARVCKNKQLTLYRAPDVIAFHLKRFTTLDNSVKKIDKYV 220
Query: 273 AFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYV 332
A+ + L F + +Y L+G + HSG P+ GHY I+ + WY NDS V
Sbjct: 221 AYPLEVDLKPFHSNPETVGELKYDLYGVVEHSGL-PNYGHYVCTIRSSPSTWYLMNDSNV 279
Query: 333 SVSTLQEVLSEKVYILFFIRANQRP 357
T L+++ YILF++R + P
Sbjct: 280 DSITDSSALNQEAYILFYVRQGKFP 304
>gi|222623836|gb|EEE57968.1| hypothetical protein OsJ_08707 [Oryza sativa Japonica Group]
Length = 1142
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 139/259 (53%), Gaps = 25/259 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N GN+CYLNSVLQCLTYT P + +H S C+ + C C L+
Sbjct: 86 GLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHMSSCRTIGF-----------CALCALQ 134
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ + +L + P I LR + F+ RQEDAHE + ++++ H CL
Sbjct: 135 RHVNSALQSTGKILRPVHIVRNLRCISRSFRISRQEDAHELMVSLLESMHKCCL------ 188
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G SG E S+V IFGG L+SQV+C C SNK D +D+SL+I N+
Sbjct: 189 -PSGVPSGSPSAYE-----KSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEIANA 242
Query: 208 CSLKEAMQKFFQPEVLDGNNK-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFG- 265
+L +A+Q F E+LDG K Y C++C++ V A+K+ I ++P++L I LKRF
Sbjct: 243 ATLVKALQHFTAEELLDGGEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFSPFNPR 302
Query: 266 GKIDKAIAFEEVLVLSSFM 284
KIDK + F+ L L ++
Sbjct: 303 HKIDKKVQFQPTLNLKPYV 321
>gi|413938345|gb|AFW72896.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 463
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 163/325 (50%), Gaps = 31/325 (9%)
Query: 39 NSVLQCLTYTPPLANFCLKL---QHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLS 95
N+ LQC+T+T PL LKL H + C C FC L++ + S+
Sbjct: 5 NATLQCITHTVPLF---LKLCSNDHFTPCSY---------NEDGFCSFCALKEHVDESIR 52
Query: 96 VDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSG 155
++ AP K + LR + F G+QEDAHEFLR ++D H L K K GSS
Sbjct: 53 RSGSVIAPTKFRDSLRKLSLDFTPGQQEDAHEFLRCLLDNLHECTLDPKS---KSKGSSF 109
Query: 156 GGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQ 215
S+VKEIFGG L+S + C CG S + +D+SL+I L +A+Q
Sbjct: 110 ---------EEESIVKEIFGGQLKSHLSCCECGHSSETFEPFLDLSLEIDQVDHLVDALQ 160
Query: 216 KFFQPE-VLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG--KIDKAI 272
F + E V D NK C++C V KQ+++ ++P+++ LKRF + KIDK +
Sbjct: 161 SFTKVEQVGDSENKLTCESCNARVCKNKQLTLYRAPDVIAFHLKRFTTLDNSVKKIDKYV 220
Query: 273 AFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYV 332
A+ + L F + +Y L+G + HSG P+ GHY I+ + WY NDS V
Sbjct: 221 AYPLEVDLKPFHSNPETVGELKYDLYGVVEHSGL-PNYGHYVCTIRSSPSTWYLMNDSNV 279
Query: 333 SVSTLQEVLSEKVYILFFIRANQRP 357
T L+++ YILF++R + P
Sbjct: 280 DSITDSSALNQEAYILFYVRQGKFP 304
>gi|242004654|ref|XP_002423195.1| ubiquitin carboxyl-terminal hydrolase DUB-1, putative [Pediculus
humanus corporis]
gi|212506160|gb|EEB10457.1| ubiquitin carboxyl-terminal hydrolase DUB-1, putative [Pediculus
humanus corporis]
Length = 479
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 171/349 (48%), Gaps = 25/349 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
G+ N+GN+CYLNS LQ L + P L N+ L C Q + D + + C +
Sbjct: 118 GMSNMGNTCYLNSTLQALFHVPALVNWLLSETSHQNCVQNS-----DYQMHPDDITCSVI 172
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
K + S P + S L+ +H G QEDAHEF+RY++++ L
Sbjct: 173 KTLKCSQQKTGNCMKPISVYSKLKAICKHLSHGSQEDAHEFMRYLLESLEKNYL------ 226
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+ G ++ + ++ + +IFGG ++++V CL+C A S D+ LDI +
Sbjct: 227 -----TRFQGHKLDSTSKETTPINQIFGGYIRTEVVCLSCRAVSTTFQHFQDLPLDIRKA 281
Query: 208 CSLKEAMQKFFQPEVL-DGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+L +A+ +F+ E L DG + Y C+ C + VS K+ +I + PN+L +QLKRF + G
Sbjct: 282 STLNDALAGYFERERLPDGEDAYNCEKCNRKVSVYKKFTIEKPPNVLCVQLKRF-SMTNG 340
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KI K + + L ++ F+ + P +YKL I H G S + GHY A A G +Y
Sbjct: 341 KITKQVQLPQYLDITRFISTSIHPRHPVKYKLVSMITHMGQSVNCGHYTAIALAANGSYY 400
Query: 326 CCNDSYVSVSTLQEVLSEKVYILF------FIRANQRPVSANGTFASNG 368
+DS V L VLS Y++ F N RP ++ + NG
Sbjct: 401 QFDDSSVRQIPLSTVLSMSAYLILYEMERPFQTVNPRPFTSISSTVWNG 449
>gi|357485233|ref|XP_003612904.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355514239|gb|AES95862.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 715
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 167/329 (50%), Gaps = 38/329 (11%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS++QC T+T PL L HS + C C
Sbjct: 155 GLANLGNTCFLNSIMQCFTHTVPLVEGLLLSCHSP-----------NDGHNGFCVICAFR 203
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
++ +SL + +P L+ F+ F+ +QEDAHEF++ +D TC
Sbjct: 204 YQMKQSLESTGRVISPVVFVDNLKQFSSDFRRHQQEDAHEFMQCALDKLE-TCF------ 256
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
E N + K++FGG+L S+++C C S ++++D+SL+I N
Sbjct: 257 ----------SNFEEDN----IAKKVFGGSLVSKLRCCNCSRSSITNEQLIDLSLEIENV 302
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG- 266
S+ A++ F E +D K KC+ C + VS KQ+ + Q+P+I LKRF+ +
Sbjct: 303 DSISSALESFTMVENIDA--KLKCEGCNEEVSVEKQLMLDQTPSIAAFHLKRFKTVGNNA 360
Query: 267 --KIDKAIAFEEVLVLSSF-MCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR 323
KIDK I F L L + + S + +Y L+ +VH+G S DSGHY+ +++ A
Sbjct: 361 VEKIDKHINFPLELDLQPYTILNESDNASLKYDLYAVVVHNGTSSDSGHYFCFVRTAPDT 420
Query: 324 WYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
W+ +DS V+ + VLS++ YILF+ R
Sbjct: 421 WHKLDDSMVTKVSEGTVLSQEAYILFYAR 449
>gi|134106815|ref|XP_777949.1| hypothetical protein CNBA4180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260649|gb|EAL23302.1| hypothetical protein CNBA4180 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 659
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 174/364 (47%), Gaps = 33/364 (9%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQ 66
+SW ++ + KR GL N +CY N+ LQ L +TPP+ L S C Q
Sbjct: 132 FDLSWPEAIATAKRA-----AGLHNPSMACYANATLQVLLHTPPVLRIALTHDEGS-CSQ 185
Query: 67 LTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAH 126
+ ++K C C L+ S AP I L + F RQED H
Sbjct: 186 I--------KKKNFCMLCSLKHMAEGSHWSGRKAYAPG-IHRSLSQIKKGFSKNRQEDTH 236
Query: 127 EFLRYVIDACHNTCL-RLKK----LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQ 181
EF R+V DA NT L +L K + + E I S V + I+GG ++S+
Sbjct: 237 EFFRFVTDALQNTALAKLPKCVLPYNHRKFAHTTSRDTPEKIKHTSWVYR-IWGGRVRSR 295
Query: 182 VKCLACGAESNKVDEIMDISLDI--LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVS 239
V C C S+ D +D+SLD+ S+ + F + + L+G+NKY C+ CK+ +
Sbjct: 296 VVCSRCNNPSDTFDSFLDLSLDVNKQGKKSVLGMLAGFTKEDRLEGDNKYHCERCKRKAN 355
Query: 240 ARKQMSILQSPNILVIQLKRFEGIF--------GGKIDKAIAFEEVLVLSSFMCKASQDP 291
A K I Q+P IL + LKRF + K ++ I FE+ L ++ +M + P
Sbjct: 356 ATKSFKIDQAPPILTLHLKRFSVNYNPYSGRARAEKFNQPIKFEQTLDIAPYMVDPAS-P 414
Query: 292 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKV-YILFF 350
+Y+LFG H G GHY +Y++ G+W+ +D VS L++VL++K Y+L +
Sbjct: 415 GTKYRLFGVTCHRGTELRFGHYTSYVRGPSGQWFHADDDEVSPVQLEQVLNDKTAYLLSY 474
Query: 351 IRAN 354
IR +
Sbjct: 475 IRVD 478
>gi|307107733|gb|EFN55975.1| hypothetical protein CHLNCDRAFT_145319 [Chlorella variabilis]
Length = 928
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 167/333 (50%), Gaps = 25/333 (7%)
Query: 36 CYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSL- 94
CY NS+LQ L TPPLA F + +HSS C L C C LEK V++
Sbjct: 109 CYANSLLQALLATPPLAAFLVSGEHSSGC--------LKPSASHWCVLCELEKLAVQAYG 160
Query: 95 -SVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGS 153
S + P + ++ + F GRQED+HE +++A L
Sbjct: 161 DSASRGVLNPRPLLRNVKRLGKQFTFGRQEDSHELFLRLVEAVEAVQLL----------E 210
Query: 154 SGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI-LNSCSLKE 212
+GG + + + ++ +FGG +SQV+C +CG S + ++L++ SL+
Sbjct: 211 AGGKARHDLRSRETCLIHHVFGGYTRSQVECRSCGHISRAYECCTSLTLEVSARIASLEA 270
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAI 272
A+ F E LDG+N+YKCD CK V+A K ++ +P++L I LKRF GKI +
Sbjct: 271 ALSSFAASERLDGDNRYKCDGCKAYVAADKSTALEVAPHMLQICLKRFAPGRFGKITSRL 330
Query: 273 AFEEVLVLSSFMCKASQDPQ-PEYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCND 329
+F E L + +M + D +Y+L+ +VH G S D GHY AY++ W+ C+D
Sbjct: 331 SFPEQLDMGPYMAASCLDGDLVQYRLYAVVVHIDWGRSTDYGHYIAYVRCG-SSWFQCDD 389
Query: 330 SYVSVSTLQEVLSEKVYILFFIRANQRPVSANG 362
S V+ + +VL+ Y+LF+ R R + A G
Sbjct: 390 SSVTAVSAAKVLASSAYLLFYERQVPRRIVAVG 422
>gi|222623479|gb|EEE57611.1| hypothetical protein OsJ_08002 [Oryza sativa Japonica Group]
Length = 672
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 170/328 (51%), Gaps = 47/328 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N+GN+C+LNS+LQC+T+T PL L+L+ + C + D + C FC L+
Sbjct: 160 GLGNMGNTCFLNSILQCVTHTVPLF---LRLRSTDHCAPCSYD------KDGFCSFCALK 210
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ I S+ + G+QEDAHEFLR ++D + C K +
Sbjct: 211 EHIDESIR----------------------RPGQQEDAHEFLRCLLDNL-DKCTTDPKPK 247
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
K S+VK++FGG L+S++ C CG S + +D+SL+I +
Sbjct: 248 DKPSSFDE-----------ESIVKQVFGGRLKSKLTCCECGHCSETYEPFLDLSLEIDQA 296
Query: 208 CSLKEAMQKFFQPEVL-DGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+L +A++ F + E + D +K C++C V KQ+ + +SP+++ I LKRF +
Sbjct: 297 DNLIDALESFTKLERIGDAEDKLNCEHCNAKVCKNKQLMLDRSPDVVAIHLKRFTSLDRS 356
Query: 267 --KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRW 324
KIDK + + L L F C + + +Y L+G + HSG SP GHY ++ + W
Sbjct: 357 VEKIDKHVVYPLELDLKPFHCDPDINKELKYDLYGVVEHSG-SPSYGHYVCSVRSSPSTW 415
Query: 325 YCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+ NDS+V + + L+++ YILF+IR
Sbjct: 416 HLMNDSHVDLISEASALNQEGYILFYIR 443
>gi|426358879|ref|XP_004046717.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Gorilla gorilla gorilla]
Length = 407
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 148/273 (54%), Gaps = 20/273 (7%)
Query: 83 FCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR 142
C ++ + R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 2 LCTMQAHVTRALY------RPGHVIQPSQALAAGFHRGKQEDAHEFLMFAVDAMKKACL- 54
Query: 143 LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISL 202
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+L
Sbjct: 55 ------------PGHKQVDHHSNDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIAL 102
Query: 203 DILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEG 262
DI + S+K+A+++ +PE L+G N Y+C C + A K +++ S +L++ LKRF
Sbjct: 103 DIQAAQSVKQALEQLVKPEELNGENAYQCGLCLQKAPASKTLTLHTSAKVLILVLKRFSD 162
Query: 263 IFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIG 322
+ K+ K + + E L + +M + + P Y L+ +VH+G+S S HY +Y+K G
Sbjct: 163 VTANKLAKNVQYPECLDMQPYMSQQNTGPLV-YVLYAVLVHAGWSCHSRHYLSYVKAQEG 221
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQ 355
+WY +D+ V+ S + VLS++ Y LF+I+ ++
Sbjct: 222 QWYKMDDAEVTASGITSVLSQQAYDLFYIQKSE 254
>gi|58258753|ref|XP_566789.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57222926|gb|AAW40970.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 576
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 174/364 (47%), Gaps = 33/364 (9%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQ 66
+SW ++ + KR GL N +CY N+ LQ L +TPP+ L S C Q
Sbjct: 49 FDLSWPEAIATAKRA-----AGLHNPSMACYANATLQVLLHTPPVLRIALTHDEGS-CSQ 102
Query: 67 LTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAH 126
+ ++K C C L+ S AP I L + F RQED H
Sbjct: 103 I--------KKKNFCMLCSLKHMAEGSHWSGRKAYAPG-IHRSLSQIKKGFSKNRQEDTH 153
Query: 127 EFLRYVIDACHNTCL-RLKK----LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQ 181
EF R+V DA NT L +L K + + E I S V + I+GG ++S+
Sbjct: 154 EFFRFVTDALQNTALAKLPKCVLPYNHRKFAHTTSRDTPEKIKHTSWVYR-IWGGRVRSR 212
Query: 182 VKCLACGAESNKVDEIMDISLDI--LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVS 239
V C C S+ D +D+SLD+ S+ + F + + L+G+NKY C+ CK+ +
Sbjct: 213 VVCSRCNNPSDTFDSFLDLSLDVNKQGKKSVLGMLAGFTKEDRLEGDNKYHCERCKRKAN 272
Query: 240 ARKQMSILQSPNILVIQLKRFEGIF--------GGKIDKAIAFEEVLVLSSFMCKASQDP 291
A K I Q+P IL + LKRF + K ++ I FE+ L ++ +M + P
Sbjct: 273 ATKSFKIDQAPPILTLHLKRFSVNYNPYSGRARAEKFNQPIKFEQTLDIAPYMVDPAS-P 331
Query: 292 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKV-YILFF 350
+Y+LFG H G GHY +Y++ G+W+ +D VS L++VL++K Y+L +
Sbjct: 332 GTKYRLFGVTCHRGTELRFGHYTSYVRGPSGQWFHADDDEVSPVQLEQVLNDKTAYLLSY 391
Query: 351 IRAN 354
IR +
Sbjct: 392 IRVD 395
>gi|359324295|ref|XP_003640329.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
6-like [Canis lupus familiaris]
Length = 380
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 150/277 (54%), Gaps = 35/277 (12%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYT PLA++ L QH + C+ R+ C C L+
Sbjct: 81 GLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCR-----------RQTSCMLCTLQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R L P ++ L + F +QEDAHE+L +++DA CL KL
Sbjct: 130 AHLTRVLC------HPGRVLRPLPLLLTAFHRHKQEDAHEYLMFILDAMQQACLPQDKL- 182
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S++++++FGG +SQ++CL C S+ ++ +DISLDI ++
Sbjct: 183 -----------SDPECPQDSTLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGDA 231
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++ +PE+L+G N Y C C + V A K +++ SP +L++ L+RF + G K
Sbjct: 232 HSVSQALEQLVKPELLEGENAYHCSKCLEKVPASKVLTLHTSPKVLILVLRRFSDLTGNK 291
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHS 304
+ K + + E L L ++ + P FG ++++
Sbjct: 292 MTKEVQYPERLDLQHYLSEQRTGP------FGYVLYA 322
>gi|218191394|gb|EEC73821.1| hypothetical protein OsI_08545 [Oryza sativa Indica Group]
Length = 672
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 170/328 (51%), Gaps = 47/328 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N+GN+C+LNS+LQC+T+T PL L+L+ + C + D + C FC L+
Sbjct: 160 GLGNMGNTCFLNSILQCVTHTVPLF---LRLRSTDHCAPCSYD------KDGFCSFCALK 210
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ I S+ + G+QEDAHEFLR ++D + C K +
Sbjct: 211 EHIDESIR----------------------RPGQQEDAHEFLRCLLDNL-DKCTTDPKPK 247
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
K S+VK++FGG L+S++ C CG S + +D+SL+I +
Sbjct: 248 DKPSSFDE-----------ESIVKQVFGGRLKSKLTCCECGHCSETYEPFLDLSLEIDQA 296
Query: 208 CSLKEAMQKFFQPEVL-DGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+L +A++ F + E + D +K C++C V KQ+ + +SP+++ I LKRF +
Sbjct: 297 DNLIDALESFTKLERIGDAEDKLNCEHCNAKVCKNKQLMLDRSPDVVAIHLKRFTSLDRS 356
Query: 267 --KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRW 324
KIDK + + L L F C + + +Y L+G + HSG SP GHY ++ + W
Sbjct: 357 VEKIDKHVVYPLELDLKPFHCDPDINKELKYDLYGVVEHSG-SPSYGHYVCSVRSSPSTW 415
Query: 325 YCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+ NDS+V + + L+++ YILF+IR
Sbjct: 416 HLMNDSHVDLISEASALNQEGYILFYIR 443
>gi|219110875|ref|XP_002177189.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411724|gb|EEC51652.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1003
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 180/373 (48%), Gaps = 68/373 (18%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERK----REC 81
P G NLGN+C+LNS +QCL Y PP FC SL L+ +S +RK R+
Sbjct: 242 PKGFVNLGNTCFLNSTVQCLAYLPP---FC-----QSLLSILSHESKHGEKRKTSQGRKV 293
Query: 82 PFCILEKRIVR-------------SLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEF 128
F IL + SL+ + A + SC F+ GRQEDAHEF
Sbjct: 294 TF-ILRSLFSQVHGIDGGTTHSGSSLAPRAIVQAVPTLGSCGSRKGYKFRPGRQEDAHEF 352
Query: 129 LRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETIN----GGSSVVKEIFGGALQSQVKC 184
L +++DA ++ L+ + G + G + + ++ + IFGG +SQV+C
Sbjct: 353 LVHLLDAMNDGELK------EAGINQNASGWRDRLPIPRLDETTFIHRIFGGYFRSQVRC 406
Query: 185 LACGAESNKVDEIMDISLDILNSC--SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
+C SN D ++++SL++ S+ +A+ +F + E LD N++KC CKK V A K
Sbjct: 407 TSCNNRSNTYDPLLNLSLEVSRKACNSVAQALHEFTRKETLDSQNQWKCSGCKKYVCATK 466
Query: 243 QMSILQSPNILVIQLKRFEGIFGG------------------KIDKAIAFEEVLVLSSFM 284
Q+++ + P L IQLKRF + G KI K+I F L L
Sbjct: 467 QLTVFRPPLSLCIQLKRF--TYSGRLKFSVGFGSFGNGGGGQKISKSIEFPAQLKLP--- 521
Query: 285 CKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIG----RWYCCNDSYVSVSTLQEV 340
S Y L G ++H G S SGHY AY++ G +W+ +DS+V + Q V
Sbjct: 522 --LSDGRSCGYSLTGIVIHVGGSASSGHYTAYVRKPGGGSKSQWFHMDDSFVEAVSEQTV 579
Query: 341 LSEK-VYILFFIR 352
L ++ Y+LF+ R
Sbjct: 580 LRQRDAYLLFYCR 592
>gi|440804615|gb|ELR25492.1| ubiquitin specific protease, putative [Acanthamoeba castellanii
str. Neff]
Length = 695
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 176/344 (51%), Gaps = 56/344 (16%)
Query: 14 SLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSAL 73
+LLS + + G +GL N GN+CY+NSVLQC ++T PL + +HS CK T
Sbjct: 74 NLLSTRPQELG--VGLVNRGNTCYINSVLQCFSHTAPLRAYLASSEHSRSCKVRTHGF-- 129
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
C C LE EH K + EF V+
Sbjct: 130 -------CLLCALE---------------------------EHTK----QLFREFASSVM 151
Query: 134 DACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNK 193
++ L+ + + G + G G ET S+V ++FGG +S+V+C AC A
Sbjct: 152 MGMQSSILQNYRAQHPNGPPNLGPGFEET-----SLVYQLFGGRSRSRVRCGACSAIVTN 206
Query: 194 VDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
+ +D++L++ SL+EA+ + E D + YKC C K+V+A+KQ+++ ++P IL
Sbjct: 207 YEPFLDLNLELSAGASLEEALDSYTTIEHFDLSTGYKCGRCNKVVTAQKQLTVDRAPPIL 266
Query: 254 VIQLKRFEGIF-GGKIDKAIAFEEVLVLSSFMCKASQDPQPE----YKLFGTIVHSGFSP 308
V+QLKRF+ + GGKI+K + F E L ++ M S+D + E Y+L+GTIVH G +
Sbjct: 267 VVQLKRFDVMSGGGKINKTVTFREQLDIAKVM---SEDKKEEGGVLYELYGTIVHYGRTM 323
Query: 309 DSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
SGHY ++IK + G W+ +D V VL + Y+LFF R
Sbjct: 324 FSGHYVSFIK-SNGLWHLFDDDQVVEVNNAIVLKQNAYMLFFQR 366
>gi|256079377|ref|XP_002575964.1| ubiquitin-specific peptidase 42 (C19 family) [Schistosoma mansoni]
gi|353233379|emb|CCD80734.1| ubiquitin-specific peptidase 42 (C19 family) [Schistosoma mansoni]
Length = 799
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 170/327 (51%), Gaps = 22/327 (6%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSS--LCKQLTGDSALDAERK-RECPF 83
LG N GN+CYLNSVLQC+ T PL + + +HS+ C +G S++ + K R C
Sbjct: 169 LGFGNSGNTCYLNSVLQCILATGPLLAY-INHKHSNPGSCIINSGRSSIPSLNKSRFCVL 227
Query: 84 CILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
C L + I S + P+ + +R + +QEDAHEFL L
Sbjct: 228 CGLSRLINEHHSQN-GRTIPSYFVTNVRAICPSLRPYQQEDAHEFL-------------L 273
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
L R S G G ++V++ IFGG ++S+V C +C S + ++ ++S+D
Sbjct: 274 GLLSRMEDSSLAGLGKVSRKLSETNVIRRIFGGVIRSEVTCHSCLKVSARDEQCFNLSMD 333
Query: 204 ILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI 263
I + SL++ + + + E L G N YKC+NC +L +A ++ +I ++P IL+IQL RF
Sbjct: 334 ITCARSLQQCLCNYVRSEELSGQNAYKCENCHQLRAAMRKCTIYRAPPILIIQLNRFSR- 392
Query: 264 FGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR 323
K+D + F L FM ++ P YKL+ + H G+S SGHY ++ G+
Sbjct: 393 -HQKLDIRVDFPSSFNLRPFMTQSKGLPI-LYKLYAIVNHEGYSCRSGHYVSFTLRH-GQ 449
Query: 324 WYCCNDSYVSVSTLQEVLSEKVYILFF 350
W NDS+VS + VL + Y+LF+
Sbjct: 450 WLSLNDSFVSTTNTDHVLRQSPYLLFY 476
>gi|224138132|ref|XP_002326526.1| predicted protein [Populus trichocarpa]
gi|222833848|gb|EEE72325.1| predicted protein [Populus trichocarpa]
Length = 835
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/330 (32%), Positives = 173/330 (52%), Gaps = 28/330 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
L N GN+CY+N++LQC T+T PL H C + C C+L
Sbjct: 276 ALFNKGNTCYINAILQCFTHTVPLVQALRSCNHEMPCIT-----------EGFCVLCVLR 324
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I SLS + P K+ + L + F+ +QEDAHEFL+ CL L++L
Sbjct: 325 DHIELSLSSSGKILEPLKLVNNLENISSVFRRYQQEDAHEFLQ---------CL-LERLE 374
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
R SS + + ++V+ +FGG L S+++C CG S+K + ++D+SL+I ++
Sbjct: 375 RHCLDSSLTDDSASSHD--KNIVERVFGGRLVSKLRCCNCGHCSDKYEPLIDLSLEIEDA 432
Query: 208 CSLKEAMQKFFQPE-VLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF--EGIF 264
SL+ A++ F + E + D K+ C++CK+ VS KQ+ + Q+P++ + LK F +G
Sbjct: 433 DSLQSALESFTKVEKIEDSETKFTCESCKEEVSREKQLMLDQAPSVAALHLKIFKIDGTS 492
Query: 265 GGKIDKAIAFEEVLVLSSFMC--KASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIG 322
KI K + F L L + + S + +Y+L+ +VH G S SGHY+ YI+ +
Sbjct: 493 VEKIGKHVQFPLELDLKPYTNDNEDSDEVGFKYQLYAVVVHKGDSLMSGHYFCYIRSSPD 552
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
W+ +D VS + VLS+ YILF+ R
Sbjct: 553 TWHKLDDPEVSKEQEEFVLSQAAYILFYAR 582
>gi|413936572|gb|AFW71123.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 890
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 127/194 (65%), Gaps = 4/194 (2%)
Query: 167 SSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSC-SLKEAMQKFFQPEVLDG 225
+++++++FGG L+S+VKCL C ES + + IMD++L+I SL++A+ +F PE LDG
Sbjct: 472 TTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDLDG 531
Query: 226 NNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMC 285
+N YKC C V ARKQ+S+ + PNIL + LKRF+ GKI+K + F ++L + F+
Sbjct: 532 DNMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQSGKYGKINKCVTFPDMLDMVPFVT 591
Query: 286 KASQDPQPEYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE 343
+ +P P Y L+ +VH + + SGHY +Y+KD G W +DS V V ++ +V+SE
Sbjct: 592 GSGDNP-PLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQVVSVNQVMSE 650
Query: 344 KVYILFFIRANQRP 357
Y+LF++R+ RP
Sbjct: 651 GAYMLFYLRSFPRP 664
>gi|413936571|gb|AFW71122.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 821
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 127/194 (65%), Gaps = 4/194 (2%)
Query: 167 SSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSC-SLKEAMQKFFQPEVLDG 225
+++++++FGG L+S+VKCL C ES + + IMD++L+I SL++A+ +F PE LDG
Sbjct: 472 TTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDLDG 531
Query: 226 NNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMC 285
+N YKC C V ARKQ+S+ + PNIL + LKRF+ GKI+K + F ++L + F+
Sbjct: 532 DNMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQSGKYGKINKCVTFPDMLDMVPFVT 591
Query: 286 KASQDPQPEYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE 343
+ +P P Y L+ +VH + + SGHY +Y+KD G W +DS V V ++ +V+SE
Sbjct: 592 GSGDNP-PLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQVVSVNQVMSE 650
Query: 344 KVYILFFIRANQRP 357
Y+LF++R+ RP
Sbjct: 651 GAYMLFYLRSFPRP 664
>gi|71030536|ref|XP_764910.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351866|gb|EAN32627.1| hypothetical protein TP02_0344 [Theileria parva]
Length = 671
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/366 (32%), Positives = 180/366 (49%), Gaps = 30/366 (8%)
Query: 1 MGLAHELQMSWQPSLLSEKRKRGGPPLGLRNLG-NSCYLNSVLQCLTYTPPLANFCLKLQ 59
+G+ H ++ W ++ G GL N G N CY+N ++Q LT+TP LA+ LK
Sbjct: 63 LGIYHLPKVKWDDDSMT----MGA---GLNNPGINICYMNVIIQVLTHTPFLASSLLKSY 115
Query: 60 HSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKC 119
HS C E+ C C+ E + +S L+ P + I+A FK
Sbjct: 116 HSKTCSHY--------EKDIFCIMCLFENYVKQSFESPNPLNNPFYSIAKKFIWAR-FKL 166
Query: 120 GRQEDAHEFLRYVIDACHNTC-LRLKKLRRKGGGSSGGGGGGETINGG---SSVVKEIFG 175
G Q+DA FL++ +D+ C L + + S G + I+ S+V+ +FG
Sbjct: 167 GHQDDAFIFLKHFLDSLSKACYLNSHESEKPEDESEGQSKPKDFISNDQIMSTVIGCLFG 226
Query: 176 GALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCK 235
G ++ + C C +S KV+E D+++++ S L + + +F PE L +NKY C NCK
Sbjct: 227 GYFRNVIVCNNCSRKSEKVEEFFDLAVEVTKSNRLIDLLSEFVLPEKLTNDNKYFCSNCK 286
Query: 236 KLVSARKQMSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKASQDPQP 293
+A K +SI ++P IL I LKRF G K KAI F ++L +S K+S+D
Sbjct: 287 GYQNANKSLSIYKAPRILNINLKRFNLYSNGYKKSLKAIEFPQLLSIS---LKSSEDSYT 343
Query: 294 --EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK--VYILF 349
Y L+ + H G S GHY +IK G WY +DS + + VLS VY+LF
Sbjct: 344 WLNYDLYAIVCHIGKSLHMGHYITFIKGKHGFWYRFDDSIIQCVSESTVLSHNNDVYLLF 403
Query: 350 FIRANQ 355
+ N+
Sbjct: 404 YSINNE 409
>gi|302847648|ref|XP_002955358.1| hypothetical protein VOLCADRAFT_65702 [Volvox carteri f.
nagariensis]
gi|300259430|gb|EFJ43658.1| hypothetical protein VOLCADRAFT_65702 [Volvox carteri f.
nagariensis]
Length = 293
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 118/193 (61%), Gaps = 7/193 (3%)
Query: 165 GGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLD 224
G ++V+E+F G QSQV+CLACG ESN + + LDI + S+ E ++ F + E LD
Sbjct: 103 GCRTIVEELFLGRWQSQVRCLACGHESNTYESFATLPLDIARARSVHEGLRSFIEAERLD 162
Query: 225 GNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFM 284
G+NKYKCD C++LV A KQ +I PN+LV+ LKRF+G G + K ++ L L+
Sbjct: 163 GDNKYKCDKCRQLVPAIKQTTIWDDPNVLVLHLKRFDG--GSLLGKITRHQQELELAETG 220
Query: 285 CKASQDPQPE-----YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQE 339
+ Y L G +VH G S SGHYYA+++D+ G W C NDS+V ++L++
Sbjct: 221 GDDAGADGGGGHSSIYTLTGVLVHQGASLHSGHYYAFVRDSHGGWSCMNDSHVYGTSLEQ 280
Query: 340 VLSEKVYILFFIR 352
V E+ Y+LF+ R
Sbjct: 281 VRQEQAYLLFYTR 293
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 12 QPSLLSEKRKRGG---PPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQH 60
QPS+L+ + G GL NLGNSCYLNS LQCL Y PPLA+ CL H
Sbjct: 24 QPSVLNLPARWKGNQSAGAGLSNLGNSCYLNSTLQCLAYVPPLAHLCLGRTH 75
>gi|402913751|ref|XP_003919327.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 288
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 129/238 (54%), Gaps = 30/238 (12%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS LC R + C C +E
Sbjct: 81 GLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQLC-----------HRHKCCMLCTME 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL +++DA CL
Sbjct: 130 AHITRALHC------PGHVIQPSQALAAGFHRGKQEDAHEFLMFIVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFG 265
S+K+A+++ +PE L+G N Y C C + A K ++ S +L++ LKRF + G
Sbjct: 231 QSVKQALEQVVKPEELNGENAYHCGLCLQKAPASKTFTLHTSAKVLILVLKRFSDVTG 288
>gi|255086105|ref|XP_002509019.1| predicted protein [Micromonas sp. RCC299]
gi|226524297|gb|ACO70277.1| predicted protein [Micromonas sp. RCC299]
Length = 374
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/338 (33%), Positives = 171/338 (50%), Gaps = 30/338 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPL-ANFCLKLQHSSLCKQLTGDSALDAERKRECPFC 84
P GL N GN+C+ S LQCL +T L A+F + CK C C
Sbjct: 56 PAGLCNSGNTCFAASALQCLYHTRLLTAHFADEPHPHDSCKN-----------PGFCVTC 104
Query: 85 ILEKRIVRSLSVDLTLD-APAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
+K ++++L + + K+ + + A+HF GRQED+HE++R ++D H +
Sbjct: 105 EYQKHVLKALDAEPRGSFSIGKLTNAIGSIAKHFVRGRQEDSHEYIRGLLDGIH-----V 159
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
+ L+ G + T +++V IFGG QV+C+ CG S ++DI ++
Sbjct: 160 QALKEFAGEKAEKELDARTQE--TTIVHHIFGGYTCGQVECIQCGHVSRNYQSMIDIPVE 217
Query: 204 IL-NSCSLKEAMQK--FFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF 260
+ S S EA K F E+LDG+NKYKC C+ V A K I SPN+LV+ LKR+
Sbjct: 218 VTAKSSSGIEASLKSNFLDTEILDGSNKYKCARCRAYVRAEKGGKIHVSPNVLVVPLKRY 277
Query: 261 EGIFGGKIDKAIAFEEVLVLSSFMCKAS----QDPQPEYKLFGTIVH--SGFSPDSGHYY 314
KI K + F L L+ +M + + + P P Y L+G +VH G S SGHY
Sbjct: 278 TMGRFSKITKFVEFPATLDLTPYMSRDAPYEGKSP-PTYTLYGVVVHLDWGGSAHSGHYV 336
Query: 315 AYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+Y++ GRW C+D + + VL +K Y+LF+ R
Sbjct: 337 SYVRLLDGRWCKCDDGRIEETDEATVLKQKAYLLFYER 374
>gi|159469257|ref|XP_001692784.1| predicted protein [Chlamydomonas reinhardtii]
gi|158278037|gb|EDP03803.1| predicted protein [Chlamydomonas reinhardtii]
Length = 263
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 133/234 (56%), Gaps = 16/234 (6%)
Query: 123 EDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQV 182
ED+HEFLR ++DA H CLR + + + ++ V IFGG L+SQ+
Sbjct: 42 EDSHEFLRCLLDAMHEACLRRFRPAKPPPELAA-----------TTFVYRIFGGRLKSQI 90
Query: 183 KCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDG---NNKYKCDNCKKLVS 239
+C S D +D+SL+I + SL+ A+ F EVL ++ +C +C V
Sbjct: 91 ECDGVDYVSRTFDPFLDLSLEINRAASLERALAAFTAAEVLTAPTTSHGRRCGSCASWVR 150
Query: 240 ARKQMSILQSPNILVIQLKRFE-GIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLF 298
A K++SI +PN+L + LKRFE G FG KI+K +AF L L +M A++ P Y L+
Sbjct: 151 ATKRISIEDAPNVLTVHLKRFEYGGFGAKINKHVAFGTELNLRPYM-SATKGPALMYDLY 209
Query: 299 GTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
G +VH G+S +SGHY Y+K A G W+ C+D V+ + VL ++ YILF+IR
Sbjct: 210 GVLVHHGYSVNSGHYICYVKAANGLWHVCDDHRVAAVGERTVLDQRAYILFYIR 263
>gi|297302780|ref|XP_001119441.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Macaca mulatta]
Length = 293
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 131/243 (53%), Gaps = 30/243 (12%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS LC + C C +E
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQLC-----------HHHKCCMLCTME 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + F G+QEDAHEFL +++DA CL
Sbjct: 130 AHITRALH------RPGHVIQPSQALVAGFHRGKQEDAHEFLMFIVDAMKRACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHRQVDHDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+K+A+++ +PE L+G N Y C C + A K+ ++ S +L++ LKRF + G K
Sbjct: 231 QSVKQALEQVVKPEELNGENAYHCGLCLQKAPASKKFTLHTSAKVLILVLKRFSDVTGNK 290
Query: 268 IDK 270
+ K
Sbjct: 291 LAK 293
>gi|359324316|ref|XP_003640339.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
6-like [Canis lupus familiaris]
Length = 375
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 146/286 (51%), Gaps = 30/286 (10%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYT PLA++ L +H + C+ ++ C C L+
Sbjct: 81 GLQNMGNTCYVNATLQCLTYTEPLASYVLSQKHGTACR-----------KQISCMLCTLQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ R L P ++ + F +QEDAHE+L +++DA CL K
Sbjct: 130 AHMTRVLC------HPGRVLPTPSLLLAAFHTHKQEDAHEYLMFILDAMQQACLPEDKPS 183
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S++++ FGG +S ++CL C S+ ++ +DI LDI +
Sbjct: 184 DSQHAQD------------STLIQHSFGGYFRSHIQCLHCQGISSTLEPYLDIRLDIGTA 231
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
S+ +A+++ +PE+L+G N Y C C + V A K +++ +L++ LKRF G K
Sbjct: 232 QSVSQALEQLVKPEMLEGENAYHCSKCLEKVPASKVLTLHSCAKVLILVLKRFSDFTGNK 291
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHY 313
+ K + + E L + + + P Y L+ +VH+G+S SG +
Sbjct: 292 MTKEMQYPECLDMQHSLSEQRAGPL-VYVLYAVLVHAGWSCHSGQF 336
>gi|303284907|ref|XP_003061744.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457074|gb|EEH54374.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 390
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 177/359 (49%), Gaps = 32/359 (8%)
Query: 11 WQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPL-ANFCLKLQHSSLCKQLTG 69
W+ + E+ R P GLRN GN+C+ S LQCL +T A+F + + C G
Sbjct: 49 WRDEIDGERFDRA--PAGLRNSGNTCFAASALQCLYHTRLFTAHFATETHDAESCGAARG 106
Query: 70 DSALDAERKRECPFCILEKRIVRSLSVDLTLDAPA--KIQSCLRIFAEHFKCGRQEDAHE 127
+ C C + + ++L D DA + K+ S + A+HF GRQED+HE
Sbjct: 107 GTF--------CVTCEYQAHVRKALDAD-PADAFSIGKLTSSIGKVAKHFVRGRQEDSHE 157
Query: 128 FLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLAC 187
++R ++DA H ++ L+ G + T +++ +FGG +V C C
Sbjct: 158 YIRGLLDAMH-----VRWLKEHAGEDAEKTLDQRTQE--TTMTYHVFGGYTCGEVVCGDC 210
Query: 188 GAESNKVDEIMDISLDI--LNSCSLKEAMQ-KFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
G S ++D+ +++ + S++ + + F E LDGNNKYKC C V A K
Sbjct: 211 GHHSRNYQSMIDVPVEVSARGAPSIEASFKANFVDVETLDGNNKYKCGRCDAYVRATKGS 270
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQ---DPQPEYKLFGTI 301
I SPN+LV+ LKRF+ KI K + F L LS +M + D P Y L+G +
Sbjct: 271 KIHVSPNVLVVPLKRFQIGRFSKITKWVEFPVHLDLSPYMSSDAPLEGDAPPTYALYGVV 330
Query: 302 VHSGF--SPDSGHYYAYIK--DAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
VH F S SGHY +++K D + W C+D V+ + VL +K Y+LF+ R R
Sbjct: 331 VHLDFCGSAHSGHYVSFVKLNDDV-TWCKCDDGRVTETDEATVLKQKAYLLFYERERVR 388
>gi|339254984|ref|XP_003371133.1| ubiquitin carboxyl- hydrolase 36 [Trichinella spiralis]
gi|316960713|gb|EFV48060.1| ubiquitin carboxyl- hydrolase 36 [Trichinella spiralis]
Length = 247
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 136/253 (53%), Gaps = 17/253 (6%)
Query: 81 CPFCILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACH 137
C C L KR+ + + +P I +R + GRQEDAHEFLRY +DA
Sbjct: 8 CAICALRSHVKRVFAAAKSNSGSFSPTHIAQHIRCVMKSHSHGRQEDAHEFLRYFVDAMQ 67
Query: 138 NTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEI 197
N L + G + +S++ IFGG +SQ+ C C S D
Sbjct: 68 NAALFPYR-----------GRNLDIFTQETSIISRIFGGFHRSQIVCNNCQYVSVIYDPF 116
Query: 198 MDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQL 257
+D+SL+I +++ AM + + E L ++ Y C CK+ VSARK ++I +PN+L I L
Sbjct: 117 LDLSLEIKQWNTVEHAMAHYTKMETLSNDDAYNCPRCKRRVSARKILTIHSAPNVLTIHL 176
Query: 258 KRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYI 317
KRF+ GKID+ I + + + L FM + Q P Y+L+G ++H+G S +SGHYYA++
Sbjct: 177 KRFDHF--GKIDRHIGYSDRMNLRPFMTE-KQGPPVNYRLYGVVIHNGRSTNSGHYYAFV 233
Query: 318 KDAIGRWYCCNDS 330
+ +G+W+ +DS
Sbjct: 234 CNPLGQWHLMDDS 246
>gi|359324338|ref|XP_540055.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 524
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 150/276 (54%), Gaps = 19/276 (6%)
Query: 77 RKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDAC 136
R+ C C L+ ++R L P ++ L + F +QEDAHE+L +++DA
Sbjct: 108 RQTSCMLCTLQAHLMRVLC------HPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAM 161
Query: 137 HNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDE 196
CL KL S++++++FGG +SQ++CL C S+ ++
Sbjct: 162 QQACLPEDKL------------SDPECPQDSTLIQQLFGGYWRSQIQCLHCQGISSTLEP 209
Query: 197 IMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQ 256
+DISLDI ++ S+ +A+++ +PE+L+G N Y C C + V A K +++ SP +L++
Sbjct: 210 YLDISLDIGDAHSVSQALEQLVKPELLEGENGYHCSKCLEKVPASKVLTLHTSPKVLILV 269
Query: 257 LKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAY 316
L+RF + G K+ K + + E L + ++ + P Y L+ +V++G S SGHY+ +
Sbjct: 270 LRRFSDLTGNKMTKEVQYPERLDMQHYLSEQRAGPL-VYVLYAVLVYAGRSCHSGHYFCF 328
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+K G+WY +D+ VS + L + Y+LF+++
Sbjct: 329 VKAGNGQWYKMDDAKVSACDVTCALRQPAYVLFYMQ 364
>gi|344257555|gb|EGW13659.1| Ubiquitin carboxyl-terminal hydrolase DUB-1 [Cricetulus griseus]
Length = 306
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 160/315 (50%), Gaps = 23/315 (7%)
Query: 111 RIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVV 170
+I F +QEDAHEFL + ++A H CL+ +K E + S+ +
Sbjct: 5 KILTGAFHRQKQEDAHEFLMFTLNAMHEACLQGRK-------------PSEESSKDSTPI 51
Query: 171 KEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYK 230
EIFGG+ +SQV+CL C S+ +D+ LDI + S+K+A++ + E L G N Y
Sbjct: 52 YEIFGGSWRSQVRCLQCQGTSDAFSPFLDVLLDIHEAHSVKQALEYLVKAEELCGENAYF 111
Query: 231 CDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQD 290
CD+C++ A K ++I + +L++ L R GGK D+ + + E L L +M ++++
Sbjct: 112 CDHCQEKTPALKSLAIQGASKVLLLVLNRSSDSAGGKTDRKVRYPESLDLRPYMSQSNRG 171
Query: 291 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
P Y L+ +VH+G + SGHY+ Y++ G+WY +DS V+ + VLSE Y+LF+
Sbjct: 172 PLV-YALYAVLVHAGATCHSGHYFCYVRAGNGKWYKMDDSTVTRCEVASVLSESAYLLFY 230
Query: 351 IRAN-------QRPV-SANGTFASNGV-KSHENGKEAYKGVKGTVPLKAVATKPSAEQSS 401
++ RPV + N A G K H+ P +A A S +Q
Sbjct: 231 VQGTDGRGDSVNRPVGTGNKAHAGKGWQKKHKRRSCVQAAEPRREPEEAAAQAKSLDQWK 290
Query: 402 RKTPSTISKVEKVPS 416
S +S + +V S
Sbjct: 291 HDFISILSILGRVDS 305
>gi|405117812|gb|AFR92587.1| ubiquitin C-terminal hydrolase Ubp16 [Cryptococcus neoformans var.
grubii H99]
Length = 624
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 176/385 (45%), Gaps = 36/385 (9%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQ 66
+SW ++ + KR GL N +CY N+ LQ L +TPP+ L S C Q
Sbjct: 96 FDLSWPEAIATAKRA-----AGLHNPSMACYANATLQVLLHTPPVLRIALTHDEGS-CSQ 149
Query: 67 LTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAH 126
+ ++K C C L+ S AP I L + F RQED H
Sbjct: 150 I--------KKKNFCMLCSLKHMAEGSHWSGRKAYAPG-IHRSLSQIKKGFSKNRQEDTH 200
Query: 127 EFLRYVIDACHNTCL-RLKK----LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQ 181
EF R+V DA NT L +L K ++ E I S V + I+GG ++S+
Sbjct: 201 EFFRFVTDALQNTALAKLPKSVLHYHQQNFAHKTSRDIPEKIKHTSWVYR-IWGGRVRSR 259
Query: 182 VKCLACGAESNKVDEIMDISLDI--LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVS 239
V C C S+ D +D+SLD+ S+ + F + + L+G+NKY C+ CK+ +
Sbjct: 260 VVCSRCNNPSDTFDSFLDLSLDVNKQGKKSVLGMLAGFTKEDKLEGDNKYHCERCKRKAN 319
Query: 240 ARKQMSILQSPNILVIQLKRFEGIFGG--------KIDKAIAFEEVLVLSSFMCKASQDP 291
A K I Q+P IL + LKRF + K ++ I FE+ L ++ +M
Sbjct: 320 ATKSFKIDQAPPILTLHLKRFSVNYNHYSGRARAEKFNQPIKFEQTLDIAPYMVNPGSSG 379
Query: 292 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKV-YILFF 350
+Y+LFG H G GHY +Y++ G+W+ +D VS L +VL++K Y+L +
Sbjct: 380 T-KYRLFGVTCHRGTELRFGHYTSYVRGPSGQWFHADDDDVSPVQLVQVLNDKTAYLLSY 438
Query: 351 IRANQRPVSANGTFASNGVKSHENG 375
IR G S VK NG
Sbjct: 439 IRVEN---GKEGLCESPAVKDRVNG 460
>gi|119613630|gb|EAW93224.1| hCG201263, isoform CRA_b [Homo sapiens]
Length = 584
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 171/363 (47%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+ P L +F L +H + +T S C C +
Sbjct: 237 GLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCI---MTSPSL--------CLVCEMS 285
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S T P K+ + I AEH RQ+DAHEFL ++D H
Sbjct: 286 SLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH---------- 335
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+ GG N + ++ +IF G LQS V C AC + S +D DISLD+ S
Sbjct: 336 -RHSKDDSGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGS 394
Query: 208 C-------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
C SL + +Q F +PE L + K KC++C+ + K
Sbjct: 395 CATFDSQNPERADSTVSRDDHIPGIPSLTDCLQWFTRPEHLGSSAKIKCNSCQSYQESTK 454
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMC-------KASQDP-- 291
Q+++ + P + LKRFE G KI+ I+F L ++ F+ K Q P
Sbjct: 455 QLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPTD 514
Query: 292 ----QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
+ +Y LF I H G + +SGHY ++I+ +W+ C+D+ ++ +T++++L + Y+
Sbjct: 515 CVPNENKYSLFAVINHHG-TLESGHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYL 573
Query: 348 LFF 350
LF+
Sbjct: 574 LFY 576
>gi|402913054|ref|XP_003919045.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 285
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 127/233 (54%), Gaps = 30/233 (12%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS LC R + C C +E
Sbjct: 81 GLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQLC-----------HRHKCCMLCTME 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL +++DA CL
Sbjct: 130 AHITRALHC------PGHVIQPSQALAAGFHRGKQEDAHEFLMFIVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF 260
S+K+A+++ +PE L+G N Y C C + A K ++ S +L++ LKRF
Sbjct: 231 QSVKQALEQVVKPEELNGENAYHCGLCLQKAPASKTFTLHTSAKVLILVLKRF 283
>gi|345806604|ref|XP_003435458.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Canis lupus familiaris]
Length = 408
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 135/236 (57%), Gaps = 13/236 (5%)
Query: 117 FKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGG 176
F +QEDAHE+L +++DA CL KL S++++++FGG
Sbjct: 26 FHRHKQEDAHEYLMFILDAMQQACLPQDKL------------SDPECPQDSTLIQQLFGG 73
Query: 177 ALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKK 236
+SQ++CL C S+ ++ +DISLDI ++ S+ +A+++ +PE+L+G N Y C C +
Sbjct: 74 YWRSQIQCLHCQGISSTLEPYLDISLDIGDAHSVSQALEQLVKPELLEGENAYHCSKCLE 133
Query: 237 LVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYK 296
V A K +++ SP +L++ L+RF + G K+ K + + E L L ++ + P Y
Sbjct: 134 KVPASKVLTLHTSPKVLILVLRRFSDLTGNKMTKEVQYPERLDLQHYLSEQRTGPL-VYV 192
Query: 297 LFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
L+ +VH+G S SGHY+ ++K G+WY +D+ VS + L + Y+LF+++
Sbjct: 193 LYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSTCDVTCALRQPAYVLFYMQ 248
>gi|348505611|ref|XP_003440354.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Oreochromis
niloticus]
Length = 623
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 176/384 (45%), Gaps = 58/384 (15%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLT-----------GDSALDAE 76
GLRNLGN+C++N++LQ L+ + + +L +L T GD+++
Sbjct: 161 GLRNLGNTCFMNAILQSLSNIEQFSCYFKELPAVALRSGKTAGRRMYHTRSQGDNSVSLV 220
Query: 77 RKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDAC 136
+ C L + + S D A KI R + +Q+DAHEF+RY++D
Sbjct: 221 EEFRKTLCSLWQGNQTAFSPDSLFYAIWKIMPSFRGY-------QQQDAHEFMRYLLDHL 273
Query: 137 HNTCLRLKK-----LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAES 191
H + L + G G NG +SVV IFGG LQ++V CL CG ES
Sbjct: 274 HRELQYSRNGASHPLSPQDGVRLSSTDGKCCTNGTASVVTSIFGGILQNEVNCLICGTES 333
Query: 192 NKVDEIMDISLDI--------------LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKL 237
K D +D+SLDI + +C+L++ + F E LD Y C CKK
Sbjct: 334 RKFDPFLDLSLDIPSQFRQKRNKDQEPVPTCTLRDCLHSFTDLEELDDTELYYCHKCKKR 393
Query: 238 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPE 294
+ K+ I + P +L + LKRF K+D + F + L + ++ +PE
Sbjct: 394 QKSTKKFWIQKLPKVLCLHLKRFHWTAFLRNKVDTYVEFPLKGLDMRGYLL------EPE 447
Query: 295 --------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 346
Y L +VH G SGHY AY GRWY NDS V+++ V K Y
Sbjct: 448 KSLPGSCLYDLVAVVVHHGSGVGSGHYTAYGSHE-GRWYHFNDSTVTLTNEDTVRKAKAY 506
Query: 347 ILFFI-RANQRP--VSANGTFASN 367
ILF++ R Q P SA+ + A+N
Sbjct: 507 ILFYVERTGQVPSDTSASNSTATN 530
>gi|315468039|ref|NP_001186800.1| ubiquitin specific peptidase 3 [Danio rerio]
Length = 524
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 172/373 (46%), Gaps = 62/373 (16%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLT-----------GDSALDAE 76
GLRNLGN+C++N++LQ L+ + + +L +L T GDS++
Sbjct: 164 GLRNLGNTCFMNAILQSLSNIQVFSCYFKELPSVALRSGKTAGRRMYHTRSQGDSSVSLV 223
Query: 77 RKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDAC 136
+ C L + + S D KI R + +Q+DAHEFLRY++D
Sbjct: 224 EEFRKTLCSLWQGSQTAFSPDALFYVIWKIMPSFRGY-------QQQDAHEFLRYLLDHL 276
Query: 137 HNTCLRLKKLRRKGGGSSGGGGGGET-------------INGGSSVVKEIFGGALQSQVK 183
H R G +G T ING S++V +FGG LQ++V
Sbjct: 277 H---------REMQGNKNGSPSPPVTSDEPNHASESKCFINGTSTIVTSVFGGVLQNEVY 327
Query: 184 CLACGAESNKVDEIMDISLDILN--------------SCSLKEAMQKFFQPEVLDGNNKY 229
CL CG ES K D +D+SLDI N +C+L + ++ F E LD Y
Sbjct: 328 CLICGTESRKFDPFLDLSLDIPNQFRIKTTKDQEPGPTCTLSDCLRSFTDLEELDETELY 387
Query: 230 KCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEV-LVLSSFMCK 286
C CKK + K+ I + P +L + LKRF K+D + F L + S++ +
Sbjct: 388 MCHKCKKRQKSTKKFWIQKLPKVLCLHLKRFHWTAFLRNKVDTYVEFPMCGLDMKSYLLE 447
Query: 287 ASQDPQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE 343
++ PE Y L +VH G SGHY AY + G+WY NDS V++ + + VL
Sbjct: 448 P-ENSLPERCLYDLAAVVVHHGSGIGSGHYTAYGRHE-GQWYHFNDSTVTLVSEEAVLKA 505
Query: 344 KVYILFFIRANQR 356
K YILF+ + R
Sbjct: 506 KAYILFYTEHSDR 518
>gi|156088681|ref|XP_001611747.1| ubiquitin carboxyl-terminal hydrolase family protein [Babesia
bovis]
gi|154799001|gb|EDO08179.1| ubiquitin carboxyl-terminal hydrolase family protein [Babesia
bovis]
Length = 713
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 163/334 (48%), Gaps = 33/334 (9%)
Query: 28 GLRNLG-NSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GL N G N C++N ++Q LT++P LA L+ HS +C +A+RK C C+L
Sbjct: 99 GLHNPGINICFMNVIIQVLTHSPYLAPAMLRSGHSKVCP--------NAKRKMVCVTCLL 150
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
E I R+LS L + ++ +H++ GRQEDA FL++ +A C
Sbjct: 151 ESHIKRALSSPCALKNNF-VYIVQKLIWKHYRLGRQEDAFIFLKHFFEALIKGCY----- 204
Query: 147 RRKGGGSSGGGGGGETI---NGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
GS I + S + IFG L + V C C S K++ DIS+D
Sbjct: 205 -----GSKYPYTSSVIIPSKDMMQSFIGRIFGCFLLNVVICKVCNYRSEKLETCFDISVD 259
Query: 204 ILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI 263
I L + + F QPE+LD NKY C +CK A K MSI ++P I+ + LKRF
Sbjct: 260 IYRGNKLVDLLSSFVQPELLDSANKYNCPSCKTHQRATKAMSIYRAPRIMNVVLKRFGMS 319
Query: 264 FGG--KIDKAIAFEEVLVLSSFMCKASQDPQP---EYKLFGTIVHSGFSPDSGHYYAYIK 318
G K K ++F +S S+ PQP Y+L+ + H G S + GHY +IK
Sbjct: 320 ETGCEKSKKEVSFPLSFSMS---LNTSKHPQPVWVTYELYAVVCHLGRSLNMGHYITFIK 376
Query: 319 DAIGRWYCCNDSYVSVSTLQEVLS--EKVYILFF 350
G W+ NDS V+ + + VL + Y+LF+
Sbjct: 377 GQHGFWHSYNDSTVTTVSQKAVLGLRQDAYLLFY 410
>gi|114688817|ref|XP_521085.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 isoform 2 [Pan
troglodytes]
Length = 711
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 171/363 (47%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+ P L +F L +H + +T S C C +
Sbjct: 364 GLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCI---MTSPSL--------CLVCEMS 412
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S T P K+ + I AEH RQ+DAHEFL ++D H
Sbjct: 413 SLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH---------- 462
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+ GG N + ++ +IF G LQS V C AC + S +D DISLD+ S
Sbjct: 463 -RHSKDDSGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGS 521
Query: 208 C-------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
C SL + +Q F +PE L + K KC++C+ + K
Sbjct: 522 CATFDSQNPERADSAVSRDDHIPGIPSLTDCLQWFTRPEHLGSSAKIKCNSCQSYQESTK 581
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMC-------KASQDP-- 291
Q+++ + P + LKRFE G KI+ I+F L ++ F+ K Q P
Sbjct: 582 QLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPTD 641
Query: 292 ----QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
+ +Y LF I H G + +SGHY ++I+ +W+ C+D+ ++ +T++++L + Y+
Sbjct: 642 CVPNENKYSLFAVINHHG-TLESGHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYL 700
Query: 348 LFF 350
LF+
Sbjct: 701 LFY 703
>gi|41152235|ref|NP_958443.1| ubiquitin carboxyl-terminal hydrolase 51 [Homo sapiens]
gi|52000873|sp|Q70EK9.1|UBP51_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 51; AltName:
Full=Deubiquitinating enzyme 51; AltName: Full=Ubiquitin
thioesterase 51; AltName:
Full=Ubiquitin-specific-processing protease 51
gi|40788183|emb|CAE47750.2| ubiquitin specific proteinase 51 [Homo sapiens]
gi|47174857|tpe|CAE48396.2| TPA: ubiquitin specific protease-51 [Homo sapiens]
gi|225000462|gb|AAI72281.1| Ubiquitin specific peptidase 51 [synthetic construct]
Length = 711
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 171/363 (47%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+ P L +F L +H + +T S C C +
Sbjct: 364 GLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCI---MTSPSL--------CLVCEMS 412
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S T P K+ + I AEH RQ+DAHEFL ++D H
Sbjct: 413 SLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH---------- 462
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+ GG N + ++ +IF G LQS V C AC + S +D DISLD+ S
Sbjct: 463 -RHSKDDSGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGS 521
Query: 208 C-------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
C SL + +Q F +PE L + K KC++C+ + K
Sbjct: 522 CATFDSQNPERADSTVSRDDHIPGIPSLTDCLQWFTRPEHLGSSAKIKCNSCQSYQESTK 581
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMC-------KASQDP-- 291
Q+++ + P + LKRFE G KI+ I+F L ++ F+ K Q P
Sbjct: 582 QLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPTD 641
Query: 292 ----QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
+ +Y LF I H G + +SGHY ++I+ +W+ C+D+ ++ +T++++L + Y+
Sbjct: 642 CVPNENKYSLFAVINHHG-TLESGHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYL 700
Query: 348 LFF 350
LF+
Sbjct: 701 LFY 703
>gi|297710131|ref|XP_002831758.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Pongo abelii]
Length = 711
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 171/363 (47%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+ P L +F L +H + +T S C C +
Sbjct: 364 GLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCI---MTSPSL--------CLVCEMS 412
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S T P K+ + I AEH RQ+DAHEFL ++D H
Sbjct: 413 SLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH---------- 462
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+ GG N + ++ +IF G LQS V C AC + S +D DISLD+ S
Sbjct: 463 -RHSKDDSGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGS 521
Query: 208 C-------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
C SL + +Q F +PE L + K KC++C+ + K
Sbjct: 522 CATFDSQNPERADSTVSRDDHIPGIPSLTDCLQWFTRPEHLGSSAKIKCNSCQSYQESTK 581
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMC-------KASQDP-- 291
Q+++ + P + LKRFE G KI+ I+F L ++ F+ K Q P
Sbjct: 582 QLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPTD 641
Query: 292 ----QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
+ +Y LF I H G + +SGHY ++I+ +W+ C+D+ ++ +T++++L + Y+
Sbjct: 642 CVPNENKYSLFAVINHHG-TLESGHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYL 700
Query: 348 LFF 350
LF+
Sbjct: 701 LFY 703
>gi|397465443|ref|XP_003804505.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Pan paniscus]
Length = 403
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 142/260 (54%), Gaps = 14/260 (5%)
Query: 96 VDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSG 155
+ L P + + A F G+QEDAHEFL + ++A CL
Sbjct: 5 ITRALYRPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVEAMKKACL-------------P 51
Query: 156 GGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQ 215
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI + S+K+A++
Sbjct: 52 GHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDITLDIQAAQSVKQALE 111
Query: 216 KFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFE 275
+ +PE L+G N Y C C + A K +++ S L++ L RF + K+ + + +
Sbjct: 112 QLVKPEELNGENAYHCGLCLQKAPASKTLTLHTSAKFLILVLNRFSNVTCNKLARNVQYR 171
Query: 276 EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVS 335
E + +M + S P Y L+ +VH+G+S +GHY++Y+K G+WY +++ V+ S
Sbjct: 172 ECFYMQPYMSQQSTCPLV-YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDEADVTAS 230
Query: 336 TLQEVLSEKVYILFFIRANQ 355
+ VLS++ Y+LF+I+ ++
Sbjct: 231 GITSVLSQQAYVLFYIQKSE 250
>gi|328723134|ref|XP_001946077.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like
[Acyrthosiphon pisum]
Length = 920
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 173/357 (48%), Gaps = 41/357 (11%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCK 65
+Q+ WQ +K+ G GL N G CY+NS LQ L + P N+ + QH C+
Sbjct: 112 VQLGWQ-----DKKMSVGS--GLDNPGVICYINSTLQALFHIPAFTNWLMSDEQHQKTCQ 164
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
Q TG +++C C++ S + + I + L + +H RQEDA
Sbjct: 165 QKTG-------FQKDCIVCMVCNTFTLSQKHTGSSFKASIITNRLSLICKHLSTYRQEDA 217
Query: 126 HEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGS---SVVKEIFGGALQSQV 182
HEFLRY+I++ L S G ++++ S + + +IFGG ++++V
Sbjct: 218 HEFLRYLIESMERCYL------------SVLGHAAKSLDNYSKETTPINQIFGGYIRTEV 265
Query: 183 KCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
C CG S D+ LDI +S ++ +A+ +F+ E LD Y C+ C++ V+A K
Sbjct: 266 TCGKCGHISTTFQHFQDLILDIRHSDNVNDALDNYFEKEPLD--ESYVCERCRRQVAADK 323
Query: 243 QMSILQSPNILVIQLKRFE----GIFGGKIDKAIAFEEVLVLSSFMC---KASQDPQP-E 294
+ SI ++PN+L IQLKR+ G G K KAI E L LSS+ K D +P
Sbjct: 324 KFSIERAPNVLCIQLKRYSVGMGGFSGNKNSKAIQINERLDLSSYQFDHHKFKIDARPLR 383
Query: 295 YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEV-LSEKVYILFF 350
Y L ++H G S SGHY G +Y NDS V + + S YI+F+
Sbjct: 384 YHLVSMVIHYGSSLHSGHYTTLGLTPSGSYYYFNDSNVYQTNFKNYSTSNDSYIIFY 440
>gi|397465305|ref|XP_003804442.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Pan paniscus]
Length = 687
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 171/363 (47%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+ P L +F L +H + +T S C C +
Sbjct: 340 GLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCI---MTSPSL--------CLVCEMS 388
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S T P K+ + I AEH RQ+DAHEFL ++D H
Sbjct: 389 SLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH---------- 438
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+ GG N + ++ +IF G LQS V C AC + S +D DISLD+ S
Sbjct: 439 -RHSKDDSGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGS 497
Query: 208 C-------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
C SL + +Q F +PE L + K KC++C+ + K
Sbjct: 498 CATFDSQNPERADSAVSRDDHIPGIPSLTDCLQWFTRPEHLGSSAKIKCNSCQSYQESTK 557
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMC-------KASQDP-- 291
Q+++ + P + LKRFE G KI+ I+F L ++ F+ K Q P
Sbjct: 558 QLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPTD 617
Query: 292 ----QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
+ +Y LF I H G + +SGHY ++I+ +W+ C+D+ ++ +T++++L + Y+
Sbjct: 618 CVPNENKYSLFAVINHHG-TLESGHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYL 676
Query: 348 LFF 350
LF+
Sbjct: 677 LFY 679
>gi|402912520|ref|XP_003918809.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 332
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 137/239 (57%), Gaps = 14/239 (5%)
Query: 117 FKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGG 176
F G+Q DAHEFL +++DA CL G + + ++++ +IFGG
Sbjct: 5 FHRGKQADAHEFLMFIVDAMKKACL-------------PGHKQVDHDSEDTTLIHQIFGG 51
Query: 177 ALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKK 236
+SQ+KCL C S+ D +DI+LDI + S+K+A+++ +PE L+G N Y C C +
Sbjct: 52 CWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQSVKQALEQVVKPEELNGENAYHCGLCLQ 111
Query: 237 LVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYK 296
A K ++ S +L++ LKRF + G K+ K + + E L + +M + + P Y
Sbjct: 112 KAPASKTFTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLV-YV 170
Query: 297 LFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQ 355
L+ +VH+G+ +GHY +Y+K G+WY +D+ ++ ++ VLS++ Y+LF+I+ ++
Sbjct: 171 LYAVLVHAGWCCHNGHYLSYVKAPGGQWYKMDDAEITACSIASVLSQQAYVLFYIQKSE 229
>gi|449517900|ref|XP_004165982.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis
sativus]
Length = 621
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 169/344 (49%), Gaps = 38/344 (11%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQL-------------TGDSALD 74
GL NLGN+C++N++LQCLT+T P H C + DS +D
Sbjct: 70 GLANLGNTCFINAILQCLTHTAPFVEGLRSANHDMPCNSKITVTTNTFSLFLGSNDSVVD 129
Query: 75 AERKRECPFCILEKRIVRSLSVDLTLD-APAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
E + CI + S + L L + KI + F+ F +QEDAHEF++ +
Sbjct: 130 EELR----ICIHRNFVFASKKLHLDLSKSEIKITTLALDFSSFFWRYQQEDAHEFMQCFL 185
Query: 134 DACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNK 193
D KL R G + +V ++FGG L S + C CG S
Sbjct: 186 D----------KLER----CMVSEGKDRVSSEDDDLVNKVFGGRLISNLCCCNCGHCSET 231
Query: 194 VDEIMDISLDILNSCSLKEAMQKFFQPEVL-DGNNKYKCDNCKKLVSARKQMSILQSPNI 252
+ ++D+SL+I N SL A++ F + E + D K+KC+NCK+ V KQ+ + + P +
Sbjct: 232 HEPLVDLSLEIENVDSLSSALESFTKVERIGDPETKFKCENCKEEVWVEKQLKLEKIPLV 291
Query: 253 LVIQLKRF--EGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPE--YKLFGTIVHSGFSP 308
LKRF + F KI+K + F L L + +D + E Y+L+ + H+GFS
Sbjct: 292 TTFHLKRFKADSSFVEKIEKHLEFPLELDLKPYTL-GGKDAEVELKYELYAIVEHTGFSS 350
Query: 309 DSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
SGHY+++++ + W+ +DS V+ T + VLS + YIL + R
Sbjct: 351 TSGHYFSFVRSSPDTWHRMDDSLVTSVTEEYVLSREAYILLYKR 394
>gi|332266327|ref|XP_003282162.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Nomascus
leucogenys]
Length = 711
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 171/363 (47%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+ P L +F L +H + +T S C C +
Sbjct: 364 GLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCI---MTSPSL--------CLVCEMS 412
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S T P K+ + I AEH RQ+DAHEFL ++D H
Sbjct: 413 SLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH---------- 462
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+ GG N + ++ +IF G LQS V C AC + S +D DISLD+ S
Sbjct: 463 -RHSKDDSGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGS 521
Query: 208 C-------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
C SL + +Q F +PE L + K KC++C+ + K
Sbjct: 522 CATFDSQNPERADSTVSRDDHIPGIPSLTDCLQWFTRPEHLGSSAKIKCNSCQSYQESTK 581
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMC-------KASQDP-- 291
Q+++ + P + LKRFE G KI+ I+F L ++ F+ K Q P
Sbjct: 582 QLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLELDMTPFLASTKDSRMKEGQPPTD 641
Query: 292 ----QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
+ +Y LF I H G + +SGHY ++I+ +W+ C+D+ ++ +T++++L + Y+
Sbjct: 642 CVPNENKYSLFAVINHHG-TLESGHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYL 700
Query: 348 LFF 350
LF+
Sbjct: 701 LFY 703
>gi|321249377|ref|XP_003191439.1| hypothetical protein CGB_A4490C [Cryptococcus gattii WM276]
gi|317457906|gb|ADV19652.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 643
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 170/358 (47%), Gaps = 41/358 (11%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQ 66
+SW ++ + KR GL N +CY N+ LQ L +TPP+ L + C Q
Sbjct: 132 FDLSWPETIATAKRA-----AGLHNPSMACYANATLQILLHTPPVLRIALTHDEGN-CLQ 185
Query: 67 LTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAH 126
+ ++K C C L+ S AP I L + F RQED H
Sbjct: 186 I--------KKKNFCMLCSLKHMAEGSHWSGRKAYAPG-IHRHLSQIKKGFSKNRQEDTH 236
Query: 127 EFLRYVIDACHNTCL-RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
EF R+V DA NT L +L K E I S V + ++GG ++S+V C
Sbjct: 237 EFFRFVTDALQNTALAKLPK------------DTPEKIKHTSWVYR-VWGGRVRSRVVCS 283
Query: 186 ACGAESNKVDEIMDISLDI--LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C S+ D +D+SLD+ S+ + F + + L+G+NKY C+ CK +A K
Sbjct: 284 RCNNPSDTFDSFLDLSLDVNKQGKKSVLGMLAGFTKEDKLEGDNKYHCEKCKCKANATKS 343
Query: 244 MSILQSPNILVIQLKRFEGIF--------GGKIDKAIAFEEVLVLSSFMCKASQDPQPEY 295
+ Q+P +L + LKRF + K ++ I FE+ L ++ +M + P +Y
Sbjct: 344 FKVDQAPPVLTLHLKRFSVNYNPYSGRARAEKFNQPIKFEQNLDMAPYMVDP-KSPGSKY 402
Query: 296 KLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKV-YILFFIR 352
+LFG H G GHY +Y++ G+W+ +D VS L++VL++K Y+L +IR
Sbjct: 403 RLFGVTCHRGTELRFGHYTSYVRSPSGQWFHADDDDVSPVQLEQVLNDKTAYLLSYIR 460
>gi|241238064|ref|XP_002401245.1| ubiquitin-specific protease, putative [Ixodes scapularis]
gi|215496141|gb|EEC05782.1| ubiquitin-specific protease, putative [Ixodes scapularis]
Length = 587
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 180/385 (46%), Gaps = 54/385 (14%)
Query: 14 SLLSEKRKRGGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGD 70
++ + R+R LGLR NLGN+C++N ++Q LT+TP L ++ L +H +C Q D
Sbjct: 109 AMARKHRRRCARLLGLRGLMNLGNTCFMNCIVQALTHTPLLRDYFLADRH--VC-QFQDD 165
Query: 71 SALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLR 130
A+ C C + + T P ++ + A H Q+DAHEF
Sbjct: 166 PAM-------CLVCEMSRLFQEFYCGKSTPHIPYRLLHLVWTHARHLAGYEQQDAHEFFI 218
Query: 131 YVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAE 190
+D H C KG G + + ++ +IF G LQS V C +C
Sbjct: 219 ATLDVLHRHC--------KGTN----GISSTNPHHCNCIIDQIFTGGLQSDVVCQSCKGV 266
Query: 191 SNKVDEIMDISLDILNSCSLKEAM--------QKFFQPEVLDGNNKYKCDNCKKLVSARK 242
S +D DISLD+ S L++ M F +PE L + K +C C+ + K
Sbjct: 267 STTIDPFWDISLDLGPSSHLQQLMPHPGWQTLHLFTRPEHLGSSAKIRCGQCQSYQESTK 326
Query: 243 QMSILQSPNILVIQLKRFEGI--FGGKIDKAIAFEEVLVLSSFMCKASQDPQ-----PE- 294
Q+++ + P + LKRFE F KI I+F + L +S FM + + P+ PE
Sbjct: 327 QLTMKKLPVVCSFHLKRFEHSRSFHKKISSLISFPQYLDMSPFMSSSPRAPEAVAQAPEG 386
Query: 295 ------------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS 342
Y LF + HSG + ++GHY AYI+ RW+ C+D ++ ++LQ+VL
Sbjct: 387 AQEPSRPCHDNKYCLFAVVNHSG-TIETGHYTAYIRQHRDRWFKCDDHLITRASLQDVLD 445
Query: 343 EKVYILFFIRANQRPVSANGTFASN 367
+ Y+LF+ + + G+ +N
Sbjct: 446 SEGYLLFYHKQILEYEAQGGSIGAN 470
>gi|449462061|ref|XP_004148760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis
sativus]
Length = 676
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 169/344 (49%), Gaps = 38/344 (11%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQL-------------TGDSALD 74
GL NLGN+C++N++LQCLT+T P H C + DS +D
Sbjct: 125 GLANLGNTCFINAILQCLTHTAPFVEGLRSANHDMPCNSKITVTTNTFSLFLGSNDSVVD 184
Query: 75 AERKRECPFCILEKRIVRSLSVDLTLD-APAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
E + CI + S + L L + KI + F+ F +QEDAHEF++ +
Sbjct: 185 EELR----ICIHRNFVFASKKLHLDLSKSEIKITTLALDFSSFFWRYQQEDAHEFMQCFL 240
Query: 134 DACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNK 193
D KL R G + +V ++FGG L S + C CG S
Sbjct: 241 D----------KLER----CMVSEGKDRVSSEDDDLVNKVFGGRLISNLCCCNCGHCSET 286
Query: 194 VDEIMDISLDILNSCSLKEAMQKFFQPEVL-DGNNKYKCDNCKKLVSARKQMSILQSPNI 252
+ ++D+SL+I N SL A++ F + E + D K+KC+NCK+ V KQ+ + + P +
Sbjct: 287 HEPLVDLSLEIENVDSLSSALESFTKVERIGDPETKFKCENCKEEVWVEKQLKLEKIPLV 346
Query: 253 LVIQLKRF--EGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPE--YKLFGTIVHSGFSP 308
LKRF + F KI+K + F L L + +D + E Y+L+ + H+GFS
Sbjct: 347 TTFHLKRFKADSSFVEKIEKHLEFPLELDLKPYTL-GGKDAEVELKYELYAIVEHTGFSS 405
Query: 309 DSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
SGHY+++++ + W+ +DS V+ T + VLS + YIL + R
Sbjct: 406 TSGHYFSFVRSSPDTWHRMDDSLVTSVTEEYVLSREAYILLYKR 449
>gi|426358888|ref|XP_004046721.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Gorilla
gorilla gorilla]
Length = 301
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 127/236 (53%), Gaps = 30/236 (12%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKGCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRALY------RPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSNDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI 263
S+K+A+++ +PE L+G N Y+C C A K +++ S +L++ LKRF +
Sbjct: 231 QSVKQALEQLVKPEELNGENAYQCALCLHKAPASKTLTLHTSAKVLILVLKRFSDV 286
>gi|426396116|ref|XP_004064301.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Gorilla
gorilla gorilla]
Length = 648
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 171/363 (47%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+ P L +F L +H + +T S C C +
Sbjct: 301 GLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCI---MTSPSL--------CLVCEMS 349
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S T P K+ + I AEH RQ+DAHEFL ++D H
Sbjct: 350 SLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH---------- 399
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+ GG N + ++ +IF G LQS V C AC + S +D DISLD+ S
Sbjct: 400 -RHSKDDSGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGS 458
Query: 208 C-------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
C SL + +Q F +PE L + K KC++C+ + K
Sbjct: 459 CATFDSQNPERADSTVSRDDHIPGIPSLTDCLQWFTRPEHLGSSAKIKCNSCQSYQESTK 518
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMC-------KASQDP-- 291
Q+++ + P + LKRFE G KI+ I+F L ++ F+ K Q P
Sbjct: 519 QLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPTD 578
Query: 292 ----QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
+ +Y LF I H G + +SGHY ++I+ +W+ C+D+ ++ +T++++L + Y+
Sbjct: 579 CVPNENKYSLFAVINHHG-TLESGHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYL 637
Query: 348 LFF 350
LF+
Sbjct: 638 LFY 640
>gi|301792557|ref|XP_002931245.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51-like
[Ailuropoda melanoleuca]
gi|281352689|gb|EFB28273.1| hypothetical protein PANDA_022094 [Ailuropoda melanoleuca]
Length = 703
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 170/363 (46%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+ P L +F L +H + +T S C C +
Sbjct: 356 GLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCI---MTSPSL--------CLVCEMS 404
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S T P K+ + I AEH RQ+DAHEFL ++D H
Sbjct: 405 SLFNAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH---------- 454
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+ G N + ++ +IF G LQS V C AC + S +D DISLD+ S
Sbjct: 455 -RHSKDDSIGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGS 513
Query: 208 C-------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
C SL + +Q F +PE L N+K KC +C+ + K
Sbjct: 514 CATFSSQSPERADSTVSRDDHIPGIPSLTDCLQWFTRPEYLGSNSKIKCSSCQSYQESIK 573
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQ----DPQPE-- 294
Q+++ + P + LKRFE G KI+ I+F L ++ F+ + + QP+
Sbjct: 574 QLTMKKLPVVACFHLKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPQTD 633
Query: 295 -------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
Y LF I H G + +SGHY ++I+ +W+ C+D+ ++ +T++++L + Y+
Sbjct: 634 CTSNENKYSLFAVINHHG-TLESGHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYL 692
Query: 348 LFF 350
LF+
Sbjct: 693 LFY 695
>gi|403307110|ref|XP_003944051.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Saimiri
boliviensis boliviensis]
Length = 674
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 172/365 (47%), Gaps = 67/365 (18%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+ P L +F L +H + +T S C C +
Sbjct: 327 GLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCI---MTSPSL--------CLVCEMS 375
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S T P K+ + I AEH RQ+DAHEFL ++D H
Sbjct: 376 SLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHR--------- 426
Query: 148 RKGGGSSGGGGGGETINGG--SSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
S GG ET N + ++ +IF G LQS V C C + S +D DISLD+
Sbjct: 427 ----HSKDDSGGQETNNPNCCNCIIDQIFTGGLQSDVTCQTCHSVSTTIDPCWDISLDLP 482
Query: 206 NSC-------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSA 240
SC SL + +Q F +PE L + K KC++C+ +
Sbjct: 483 GSCATFDSQNPERAGSTVSRDDHIPGIPSLTDCLQWFTRPEHLGSSAKIKCNSCQSYQES 542
Query: 241 RKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMC-------KASQDP 291
KQ+++ + P + LKRFE G KI+ I+F L ++ F+ K Q P
Sbjct: 543 TKQLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPP 602
Query: 292 ------QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKV 345
+ +Y LF I H G + +SGHY ++I+ +W+ C+D+ ++ +T++++L +
Sbjct: 603 TDCVPNENKYSLFAVINHHG-TLESGHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEG 661
Query: 346 YILFF 350
Y+LF+
Sbjct: 662 YLLFY 666
>gi|328699875|ref|XP_001952323.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like
[Acyrthosiphon pisum]
Length = 765
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 174/357 (48%), Gaps = 41/357 (11%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKL-QHSSLCK 65
+Q+ WQ +K+ G GL N G CY+NS LQ L + P N+ + QH C+
Sbjct: 68 VQLGWQ-----DKKMSVGS--GLDNPGVICYINSTLQALFHIPAFTNWLMSDGQHQKTCQ 120
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
+ TG +++C C++ S + + + I + L + +H RQEDA
Sbjct: 121 KKTG-------FQKDCIVCMVCNTFKLSKKLTGSSFKASIITNRLSLICKHLSTYRQEDA 173
Query: 126 HEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGS---SVVKEIFGGALQSQV 182
HEFLRY+I++ L S G ++++ S + + +IFGG ++++V
Sbjct: 174 HEFLRYLIESMEQCYL------------SAFGPAAKSLDNYSKETTPINQIFGGYMRTEV 221
Query: 183 KCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
C CG S D+ LDI +S ++ +A+ +F+ E LD Y C+ C++ V+A K
Sbjct: 222 MCGKCGHISTTFQHFQDLILDIRHSDNVNDALDNYFKKEPLD--ESYLCEICQRQVAADK 279
Query: 243 QMSILQSPNILVIQLKRF----EGIFGGKIDKAIAFEEVLVLSSFMCKASQ---DPQP-E 294
+ SI ++PN+L IQLKR+ +G G K KAI E L LSS+ D +P
Sbjct: 280 KFSIERAPNVLCIQLKRYSIGMDGYSGNKNSKAIQINERLDLSSYQFDHHTFKIDVRPLR 339
Query: 295 YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEV-LSEKVYILFF 350
Y L I+H G S GHY G +YC NDS V + + S YI+F+
Sbjct: 340 YHLVSMIIHYGSSLHCGHYTTLGLTPSGSYYCFNDSNVYRTNFKNYSTSNDSYIIFY 396
>gi|291407536|ref|XP_002720078.1| PREDICTED: ubiquitin thiolesterase 3-like [Oryctolagus cuniculus]
Length = 706
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 173/363 (47%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+ P L +F L +H + +T S C C +
Sbjct: 359 GLINLGNTCFMNCIVQALTHIPLLKDFFLSNKHKCI---MTSPSL--------CLVCEMS 407
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S T P K+ + I AEH RQ+DAHEFL ++D H R K
Sbjct: 408 SLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH----RHSKDD 463
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G SS N + ++ +IF G LQS V C AC + S +D DISLD+ S
Sbjct: 464 SVGQESSNS-------NCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGS 516
Query: 208 C-------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
C SL + +Q F +PE L + K KC +C+ + K
Sbjct: 517 CATFSPQNTEMADSTMSRADHIPGIPSLTDCLQWFTRPEDLGSSAKIKCSSCQSYQESTK 576
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM----------CKASQD 290
Q+++ + P + LKRFE G KI+ I+F L ++ F+ C+ S D
Sbjct: 577 QLTMKKLPMVACFHLKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKECQPSTD 636
Query: 291 ---PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
+ +Y LF I H G + +SGHY ++I+ +W+ C+D+ ++ +T++++L + Y+
Sbjct: 637 CVSNENKYSLFAVINHHG-TLESGHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYL 695
Query: 348 LFF 350
LF+
Sbjct: 696 LFY 698
>gi|307169377|gb|EFN62098.1| Ubiquitin carboxyl-terminal hydrolase 42 [Camponotus floridanus]
Length = 785
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 162/326 (49%), Gaps = 29/326 (8%)
Query: 80 ECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNT 139
EC C + K + S P I + L++ G+QEDAHEFLRY+++ T
Sbjct: 67 ECLTCAVAKTLQFSHQKSGGAIKPFYIFNKLKLICRTMVPGQQEDAHEFLRYLLEGMERT 126
Query: 140 CLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMD 199
L K + ++ + ++ + +IFGG ++++VKCL C S D
Sbjct: 127 YLTRHKATKL-----------DSYSKETTPINQIFGGYIRTEVKCLQCQHVSTTFQHFQD 175
Query: 200 ISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
+ +DI + +L EA+ +F E LD NN YKC+ CK+ V A KQ ++ + P +L +QLKR
Sbjct: 176 LLVDIRKANTLDEALNSYFSREQLD-NNDYKCEACKRRVPATKQFTLERPPKVLCVQLKR 234
Query: 260 FEGIFGGKIDKAIAFEEVLVLSSFMCKA-SQDPQP-EYKLFGTIVHSGFSPDSGHYYAYI 317
F + GGKI + I F++ + +S ++ + + P+P YKL + H G S + GHY A
Sbjct: 235 F-SVLGGKISRHIGFKQTIDMSPYLWREPGESPRPLTYKLMSMVTHMGPSVNCGHYTAIA 293
Query: 318 KDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKSHENGKE 377
+ + G++Y +D V +L VLS YI+ F N S + + NG
Sbjct: 294 QVSSGQYYSFDDCCVRPISLNNVLSTNAYIMIFEMENYNQNSPS--------TAKVNGTT 345
Query: 378 AYKGVKGTVPL------KAVATKPSA 397
+ K + T PL K++A K S
Sbjct: 346 SVKNIVSTTPLSNSIINKSIALKAST 371
>gi|357485235|ref|XP_003612905.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355514240|gb|AES95863.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 739
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 168/353 (47%), Gaps = 62/353 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNS++QC T+T PL L HS + C C
Sbjct: 155 GLANLGNTCFLNSIMQCFTHTVPLVEGLLLSCHSP-----------NDGHNGFCVICAFR 203
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
++ +SL + +P L+ F+ F+ +QEDAHEF++ +D TC
Sbjct: 204 YQMKQSLESTGRVISPVVFVDNLKQFSSDFRRHQQEDAHEFMQCALDKLE-TCF------ 256
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
E N + K++FGG+L S+++C C S ++++D+SL+I N
Sbjct: 257 ----------SNFEEDN----IAKKVFGGSLVSKLRCCNCSRSSITNEQLIDLSLEIENV 302
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG- 266
S+ A++ F E +D K KC+ C + VS KQ+ + Q+P+I LKRF+ +
Sbjct: 303 DSISSALESFTMVENIDA--KLKCEGCNEEVSVEKQLMLDQTPSIAAFHLKRFKTVGNNA 360
Query: 267 --KIDKAIAFEEVLVLSSF-MCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR 323
KIDK I F L L + + S + +Y L+ +VH+G S DSGHY+ +++ A
Sbjct: 361 VEKIDKHINFPLELDLQPYTILNESDNASLKYDLYAVVVHNGTSSDSGHYFCFVRTAPDT 420
Query: 324 WYCCNDSYVSVSTLQ------------------------EVLSEKVYILFFIR 352
W+ +DS V+ + L VLS++ YILF+ R
Sbjct: 421 WHKLDDSMVASAILVPLGRDLIVLQITCLMIKVTKVSEGTVLSQEAYILFYAR 473
>gi|426396114|ref|XP_004064300.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51-like [Gorilla
gorilla gorilla]
Length = 469
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 171/363 (47%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+ P L +F L +H + +T S C C +
Sbjct: 122 GLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCI---MTSPSL--------CLVCEMS 170
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S T P K+ + I AEH RQ+DAHEFL ++D H
Sbjct: 171 SLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH---------- 220
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+ GG N + ++ +IF G LQS V C AC + S +D DISLD+ S
Sbjct: 221 -RHSKDDSGGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGS 279
Query: 208 C-------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
C SL + +Q F +PE L + K KC++C+ + K
Sbjct: 280 CATFDSQNPERADSTVSRDDHIPGIPSLTDCLQWFTRPEHLGSSAKIKCNSCQSYQESTK 339
Query: 243 QMSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMC-------KASQDP-- 291
Q+++ + P + LKRFE + KI+ I+F L ++ F+ K Q P
Sbjct: 340 QLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPTD 399
Query: 292 ----QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
+ +Y LF I H G + +SGHY ++I+ +W+ C+D+ ++ +T++++L + Y+
Sbjct: 400 CVPNENKYSLFAVINHHG-TLESGHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYL 458
Query: 348 LFF 350
LF+
Sbjct: 459 LFY 461
>gi|410908263|ref|XP_003967610.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Takifugu
rubripes]
Length = 612
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/369 (31%), Positives = 171/369 (46%), Gaps = 54/369 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLT-----------GDSALDAE 76
GLRNLGN+C++N++LQ L+ + + +L SL T GDS++
Sbjct: 161 GLRNLGNTCFMNAILQSLSNIEQFSCYFKELPAVSLRSGKTAGRRMYHTRSQGDSSVSLV 220
Query: 77 RKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDAC 136
+ C L + + S D KI R + +Q+DAHEF+RY++D
Sbjct: 221 EEFRKTLCSLWQGSQTAFSPDSLFYTIWKIMPSFRGY-------QQQDAHEFMRYLLDHL 273
Query: 137 HNTCLRLKKLRRKGGGSSG---------GGGGGETINGGSSVVKEIFGGALQSQVKCLAC 187
H R + R G + G ING +SVV IFGG LQ++V CL C
Sbjct: 274 H----RELQYGRNGASHAASPQDGVRLSAADGKCCINGTASVVTSIFGGILQNEVNCLIC 329
Query: 188 GAESNKVDEIMDISLDILN--------------SCSLKEAMQKFFQPEVLDGNNKYKCDN 233
G ES K D +D+SLDI + +C+L + ++ F E LD Y C
Sbjct: 330 GTESRKFDPFLDLSLDIPSQFRQKRSKDQEPGPTCTLSDCLRSFTDLEELDETELYFCHK 389
Query: 234 CKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQD 290
CKK + K+ + + P +L + LKRF KID + F + L + ++ + ++
Sbjct: 390 CKKRQKSTKKFWVQKLPKVLCLHLKRFHWTAFLRNKIDTYVEFPLKGLDMRGYLLEP-EN 448
Query: 291 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
PE Y L +VH G SGHY AY G WY NDS V+++ V K YI
Sbjct: 449 SLPESCVYDLVAVVVHHGSGVGSGHYTAYGSHE-GCWYHFNDSTVTLTNEDAVRKAKAYI 507
Query: 348 LFFI-RANQ 355
LF++ RA Q
Sbjct: 508 LFYVERAEQ 516
>gi|297473553|ref|XP_002707829.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin specific peptidase
17-like 2-like [Bos taurus]
gi|296488783|tpg|DAA30896.1| TPA: ubiquitin specific peptidase 17-like [Bos taurus]
Length = 473
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 128/230 (55%), Gaps = 14/230 (6%)
Query: 123 EDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQV 182
EDAHEFL + ++A CL S G E ++V+++IFGG +SQ+
Sbjct: 111 EDAHEFLMFTLNAMQQGCL---------SASQPSGHASED----TTVIRQIFGGTWRSQI 157
Query: 183 KCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
+CL C S+ D +DISLDI + S+++A+++ +PE LD +N Y C C + V A K
Sbjct: 158 QCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDCGVCLRKVPATK 217
Query: 243 QMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIV 302
++++ + +LV+ LKRF + G K + + + + L L + + P Y L+ +V
Sbjct: 218 RLTLHSTSQVLVLVLKRFTPVSGAKRAQEVRYPQCLDLQPYTSERKAGPL-GYVLYAVLV 276
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
HSG+S + GHY+ Y++ G+WY +D+ V+ LS+ Y+LF+ R
Sbjct: 277 HSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 326
>gi|109132984|ref|XP_001100790.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 isoform 1
[Macaca mulatta]
gi|109132986|ref|XP_001100883.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 isoform 2
[Macaca mulatta]
Length = 710
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 170/363 (46%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+ P L +F L +H + +T S C C +
Sbjct: 363 GLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCI---MTSPSL--------CLVCEMS 411
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S T P K+ + I AEH RQ+DAHEFL ++D H
Sbjct: 412 SLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH---------- 461
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+ G N + ++ +IF G LQS V C AC + S +D DISLD+ S
Sbjct: 462 -RHSKDDSGVQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGS 520
Query: 208 C-------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
C SL + +Q F +PE L + K KC++C+ + K
Sbjct: 521 CATFDSQNPERADGTVSRDDHIPGIPSLTDCLQWFTRPEHLGSSAKIKCNSCQSYQESTK 580
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMC-------KASQDP-- 291
Q+++ + P + LKRFE G KI+ I+F L ++ F+ K Q P
Sbjct: 581 QLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPAD 640
Query: 292 ----QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
+ +Y LF I H G + +SGHY ++I+ +W+ C+D+ ++ +T++++L + Y+
Sbjct: 641 CVPNENKYSLFAVINHHG-TLESGHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYL 699
Query: 348 LFF 350
LF+
Sbjct: 700 LFY 702
>gi|402914074|ref|XP_003919460.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51-like [Papio
anubis]
Length = 756
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 170/363 (46%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+ P L +F L +H + +T S C C +
Sbjct: 409 GLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCI---MTSPSL--------CLVCEMS 457
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S T P K+ + I AEH RQ+DAHEFL ++D H
Sbjct: 458 SLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH---------- 507
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+ G N + ++ +IF G LQS V C AC + S +D DISLD+ S
Sbjct: 508 -RHSKDDSGVQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGS 566
Query: 208 C-------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
C SL + +Q F +PE L + K KC++C+ + K
Sbjct: 567 CATFDSQNPERADGTVSRDHHIPGIPSLTDCLQWFTRPEHLGSSAKIKCNSCQSYQESTK 626
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMC-------KASQDP-- 291
Q+++ + P + LKRFE G KI+ I+F L ++ F+ K Q P
Sbjct: 627 QLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPAD 686
Query: 292 ----QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
+ +Y LF I H G + +SGHY ++I+ +W+ C+D+ ++ +T++++L + Y+
Sbjct: 687 CVPNENKYSLFAVINHHG-TLESGHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYL 745
Query: 348 LFF 350
LF+
Sbjct: 746 LFY 748
>gi|195337713|ref|XP_002035470.1| GM14719 [Drosophila sechellia]
gi|251765134|sp|B4HUI5.1|UBP36_DROSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|194128563|gb|EDW50606.1| GM14719 [Drosophila sechellia]
Length = 1059
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 172/348 (49%), Gaps = 50/348 (14%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQ-HSSLCK 65
+++ W+ SE++ + G G+ N+GN+CYLNS LQ L + P LAN+ + Q H + C
Sbjct: 153 IRIGWK---QSERKWQVG--TGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCN 207
Query: 66 QLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDA 125
AE C C + K ++ + S + + P I S L+ +H GRQEDA
Sbjct: 208 V--------AEPGSGCIICAMAKTLLATQS-NQSAVRPFLIYSKLKQICKHMVVGRQEDA 258
Query: 126 HEFLRYVIDACHNTCL-RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
HEFLR++++A L R + + + + ++ + +IFGG L+S+V+C
Sbjct: 259 HEFLRFLVEAMERAYLMRFRNYKEL-----------DQLVKETTPLGQIFGGYLRSEVRC 307
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
L+C S D+ LDI + SL++A + F E L+ + YKC+ CKK
Sbjct: 308 LSCNHVSITFQHFQDLLLDIRKADSLEDAFEGHFSRERLE-DMGYKCEGCKK-------- 358
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCK--ASQDPQPEYKLFGTIV 302
+LKRF + G K+ K I+F+ + LS + + A+Q Y+L +
Sbjct: 359 -----------KLKRFS-MIGNKLTKQISFKPRIDLSKYAARSPAAQAQPLTYRLVSMVT 406
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
H G S GHY A G +Y +DSYV T+Q V + YI+FF
Sbjct: 407 HLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPITMQNVCNTNAYIMFF 454
>gi|410988678|ref|XP_004000607.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 51-like [Felis catus]
Length = 667
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 170/363 (46%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+ P L +F L +H + +T S C C +
Sbjct: 320 GLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCV---MTSPSL--------CLVCEMS 368
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S T P K+ + I AEH RQ+DAHEFL ++D H R
Sbjct: 369 SLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH---------R 419
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
S G N + ++ +IF G LQS V C AC + S +D DISLD+ S
Sbjct: 420 HSKDDSVGQEANNP--NCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGS 477
Query: 208 C-------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
C SL + +Q F +PE L + K KC +C+ + K
Sbjct: 478 CATFSSQSPEGADSTVSRDDHIPGIPSLTDCLQWFTRPEYLGSSAKIKCSSCQSYQESTK 537
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMC-------KASQDP-- 291
Q+++ + P + LKRFE G KI+ I+F L ++ F+ K Q P
Sbjct: 538 QLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLELDMTPFLASTKDSRMKEDQPPTD 597
Query: 292 ----QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
+ +Y LF I H G + +SGHY ++I+ +W+ C+D+ ++ +T++++L + Y+
Sbjct: 598 CTPNENKYSLFAVINHHG-TLESGHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYL 656
Query: 348 LFF 350
LF+
Sbjct: 657 LFY 659
>gi|47226065|emb|CAG04439.1| unnamed protein product [Tetraodon nigroviridis]
Length = 269
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 122/186 (65%), Gaps = 1/186 (0%)
Query: 167 SSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGN 226
++ + ++FGG L+S++KCL C A S+ + ++I L+I + A+++F +PE+L G
Sbjct: 85 TTFIHQVFGGQLRSRIKCLNCQAVSDTFETFLNILLEIKTVSDVSTALEQFVRPEILGGP 144
Query: 227 NKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCK 286
+ Y C +CKK+V+A K ++I +S N+L + LKRF+ G KI+K + + E L L FM +
Sbjct: 145 DAYSCSSCKKMVTAIKSLTIHRSTNVLTLVLKRFDICAGEKINKDVRYPEYLDLYPFMSE 204
Query: 287 ASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 346
+ P Y+L+ +VH G S SGHY+ YIK + G+WY ND+ V ++ +Q VL+++ Y
Sbjct: 205 TQEKPLV-YRLYAVLVHYGRSSHSGHYFCYIKASDGQWYRMNDNSVIITDIQSVLAKQAY 263
Query: 347 ILFFIR 352
+LF+I+
Sbjct: 264 VLFYIK 269
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 8/61 (13%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQ 66
+ ++W +++ K G GL N+GN+CYLNS LQCLTYTPP AN+ L +HS+ CK+
Sbjct: 7 IHLNW-----TQQFKVGA---GLENVGNTCYLNSALQCLTYTPPFANYMLSQEHSATCKK 58
Query: 67 L 67
L
Sbjct: 59 L 59
>gi|297798738|ref|XP_002867253.1| hypothetical protein ARALYDRAFT_913229 [Arabidopsis lyrata subsp.
lyrata]
gi|297313089|gb|EFH43512.1| hypothetical protein ARALYDRAFT_913229 [Arabidopsis lyrata subsp.
lyrata]
Length = 193
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 78/98 (79%), Positives = 86/98 (87%), Gaps = 1/98 (1%)
Query: 169 VVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNK 228
VVKEIFGGALQSQVKCL+CGAESN DEIMDISL+IL+S S+KE+MQK FQ E+LDGNNK
Sbjct: 81 VVKEIFGGALQSQVKCLSCGAESNTADEIMDISLEILHSISIKESMQKKFQSEILDGNNK 140
Query: 229 YKCDNCKKLVSARKQM-SILQSPNILVIQLKRFEGIFG 265
YKC+ C KLV+ARKQM SILQ PNILVIQLK E IFG
Sbjct: 141 YKCETCDKLVTARKQMSSILQMPNILVIQLKVSEYIFG 178
>gi|355570597|gb|EHH25672.1| hypothetical protein EGK_21141 [Macaca mulatta]
Length = 635
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 170/363 (46%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+ P L +F L +H + +T S C C +
Sbjct: 288 GLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCI---MTSPSL--------CLVCEMS 336
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S T P K+ + I AEH RQ+DAHEFL ++D H
Sbjct: 337 SLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH---------- 386
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+ G N + ++ +IF G LQS V C AC + S +D DISLD+ S
Sbjct: 387 -RHSKDDSGVQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGS 445
Query: 208 C-------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
C SL + +Q F +PE L + K KC++C+ + K
Sbjct: 446 CATFDSQNPERADGTVSRDDHIPGIPSLTDCLQWFTRPEHLGSSAKIKCNSCQSYQESTK 505
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMC-------KASQDP-- 291
Q+++ + P + LKRFE G KI+ I+F L ++ F+ K Q P
Sbjct: 506 QLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPAD 565
Query: 292 ----QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
+ +Y LF I H G + +SGHY ++I+ +W+ C+D+ ++ +T++++L + Y+
Sbjct: 566 CVPNENKYSLFAVINHHG-TLESGHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYL 624
Query: 348 LFF 350
LF+
Sbjct: 625 LFY 627
>gi|91089399|ref|XP_974056.1| PREDICTED: similar to non-stop CG4166-PA [Tribolium castaneum]
gi|270012546|gb|EFA08994.1| hypothetical protein TcasGA2_TC006701 [Tribolium castaneum]
Length = 482
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 162/337 (48%), Gaps = 35/337 (10%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLG +C++N ++Q L +TP L ++ L +H+ CK ++G R C L
Sbjct: 159 GLLNLGQTCFMNCIVQALMHTPLLRDYFLTEEHN--CKGMSG-------RCLVCEVSKLF 209
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
+ V L L + + A H Q+DAHEF +D H CL + L
Sbjct: 210 QEFYNGTRVPLALHELLHL---IWTHARHLAGYEQQDAHEFFIATLDVLHQHCLETMPDL 266
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI-- 204
+ G + ++ +IF G LQS V C C S +D I D SLD+
Sbjct: 267 KPVNVGKNSRC---------PCIIDQIFTGGLQSDVVCQKCNGVSTTIDPISDFSLDLGP 317
Query: 205 -----LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
SL + +++F + E L N+K C NC+ + KQ+++ P ++ LKR
Sbjct: 318 VTVGGRPPTSLVDCLERFTRAEHLGENSKIMCSNCQSKQESTKQLTMNTLPIVISFHLKR 377
Query: 260 FEGI--FGGKIDKAIAFEEVLVLSSFMCKASQD-PQP---EYKLFGTIVHSGFSPDSGHY 313
F+ + KI I+F E+L ++ FM ++ D P P Y LF I H G S + GHY
Sbjct: 378 FQHMNEMEKKISTTISFPEMLDMTPFMSRSKTDSPFPSDNRYSLFAVINHIGNSINVGHY 437
Query: 314 YAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
AY++ WY C+D ++ +TL+EVL + Y+LF+
Sbjct: 438 TAYVRQLQDYWYKCDDHVITRATLKEVLDSEGYLLFY 474
>gi|403358774|gb|EJY79042.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 847
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 177/386 (45%), Gaps = 64/386 (16%)
Query: 14 SLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLT----- 68
S ++ K K GL N+GN+C+LN+ +QCL+ PL +F + H L
Sbjct: 210 STVTSKLKLDSGLTGLYNMGNTCFLNTAVQCLSSVQPLTDFFIGNLHKKLLNTTNPMGTG 269
Query: 69 GDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEF 128
GD L + L K I + + PA+ L A H CG+Q+DA EF
Sbjct: 270 GDVTLR--------YANLIKDIWQGKEEKI---YPAQFLKTLSKHAPHLVCGQQQDAQEF 318
Query: 129 LRYVIDACHNTCLRLKKL------RRKGGGSSGGGGGGET-------------------- 162
L Y++D+ H R KL R K E
Sbjct: 319 LAYILDSLHEDLNRADKLTNMKQKREKELSKKSSKNEDEDSLLDKLLDTDPSEELQEHQA 378
Query: 163 -------INGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI----LNSCSLK 211
+ S++ ++F G L+S +KCL C S K D M +++ I ++ L+
Sbjct: 379 YESWKDHLLNNRSIIVDLFQGQLKSTLKCLVCNHMSIKFDSFMYLTIPIPQKMMSDPKLE 438
Query: 212 EAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFG----GK 267
E +++F + E+LDG NK+KC C K A K++ I + P++L+I LKRFE F K
Sbjct: 439 ECVEEFTKEEILDGQNKWKCPKCDKFQRATKKIDIWKLPSVLIINLKRFE--FNQKKKAK 496
Query: 268 IDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWY 325
I+ + F + L L+ ++ K Q +P Y LF H G+ GHYY+Y K +WY
Sbjct: 497 INDLVEFPLKNLDLTPYVSKL-QREKPIYDLFAVANHEGYLT-GGHYYSYSKHRNNQQWY 554
Query: 326 CCNDSYV-SVSTLQEVLSEKVYILFF 350
+D V + ++V+S++ YILF+
Sbjct: 555 YFDDEVVKKIKNEEKVVSKEAYILFY 580
>gi|444318954|ref|XP_004180134.1| hypothetical protein TBLA_0D01070 [Tetrapisispora blattae CBS 6284]
gi|387513176|emb|CCH60615.1| hypothetical protein TBLA_0D01070 [Tetrapisispora blattae CBS 6284]
Length = 483
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 167/352 (47%), Gaps = 41/352 (11%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N+G++CY++S+LQCL + P + +K H + CK + +C C ++
Sbjct: 138 GLVNMGSTCYMSSILQCLMHNPLFVDLSMKGVHYNYCK---------IQDPMKCMSCAID 188
Query: 88 KRIVRSLSVDLTL--DAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
I + T + I +C ++ Q+DAHEFL+++++ HN +L +
Sbjct: 189 NIISETYGNKKTTPNEGLVDILNCSWRVNKNLAGYTQQDAHEFLQFILNQMHND-YKLNE 247
Query: 146 LRRKGGGSSGGGGGGETINGGSS---------VVKEIFGGALQSQVKCLACGAES-NKVD 195
+ G +NG SS + IF G L+S + C C A+S +D
Sbjct: 248 IHDTNKQEMNGTDFKTMVNGNSSKEHLHLCNCLPHTIFQGFLKSIISCSECKAQSQTTID 307
Query: 196 EIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVI 255
MD+SLD+ +L E ++ F + E L + Y C C K A +Q+SIL+ I+VI
Sbjct: 308 PYMDLSLDVKGKSTLYECLESFHRTERLH-DFTYNCKKCNKSQDANRQLSILKLAPIMVI 366
Query: 256 QLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQDPQPE--------------YKLF 298
QLKRFE + G KI+ + F L + SF + D P Y+L
Sbjct: 367 QLKRFEHLITGSSVKINDFVEFPLHLNMKSFCTAPTPDTDPTNLNEKTNKSTPDMIYELT 426
Query: 299 GTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
G + H G + + GHY Y K A G WY NDS V L+++L E+ Y+L +
Sbjct: 427 GIVTHRG-TVNEGHYITYTKTADGVWYQFNDSVVMKVPLEQMLKEQAYLLIY 477
>gi|340508522|gb|EGR34211.1| ubiquitin specific peptidase 8, putative [Ichthyophthirius
multifiliis]
Length = 547
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 170/345 (49%), Gaps = 32/345 (9%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCIL 86
+GL NLGN+CY+N+ LQCL+ TPPL ++ L H K++ ++ L + + F
Sbjct: 81 VGLYNLGNTCYINAALQCLSNTPPLCDYFLSQLHE---KEINPNAFLGSNGQITSQFG-- 135
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK- 145
K I+ D P + + FAE F G Q+D+HEFL +++D H R+ K
Sbjct: 136 -KLILDLWQTDQNFIEPIDFINEIGQFAEQFADGTQQDSHEFLAFLLDILHEDLNRVIKK 194
Query: 146 --LRRKGGG-----SSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
++ K E + S++ ++F G +S +KCL CG+ S+K +
Sbjct: 195 PYIKEKDYNCEKHEEYSKESWKEYLMRNKSIIVDLFQGQTKSTLKCLVCGSVSHKFEAFQ 254
Query: 199 DISL---------DILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQS 249
+S+ +I+N L E +Q+F + E LD N + C CKK + KQ+ + +
Sbjct: 255 FLSVPVPANKSHNEIIN---LSECIQEFTKEEYLDQNEWWYCFKCKKNRKSTKQIDLWKL 311
Query: 250 PNILVIQLK--RFEGIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGF 306
PNIL+I LK RF+ KI + F + L + +D QP Y LF H G
Sbjct: 312 PNILIIHLKRFRFDKNIKAKIKNFVDFPIQNFDLQPYTIGRQRD-QPIYDLFAISNHEG- 369
Query: 307 SPDSGHYYAYIKD-AIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
+ SGHY AY K+ A WY +D V +++ SEK Y+LF+
Sbjct: 370 NLSSGHYTAYAKNRANQNWYLFDDCNVQQCLKEQIKSEKAYVLFY 414
>gi|255548704|ref|XP_002515408.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223545352|gb|EEF46857.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
Length = 551
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 181/390 (46%), Gaps = 66/390 (16%)
Query: 6 ELQMSWQPSLLSEKRKRGGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLKLQHS- 61
+L+ S Q L+ ++R++ PLGLR NLG++C++NSVLQ L + PP N+ L +H
Sbjct: 155 DLKKSKQLVLMRDRREKSCYPLGLRGLNNLGSTCFMNSVLQALLHAPPFRNYFLSDRHDR 214
Query: 62 SLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGR 121
C++ + D R C C ++ I S D T +PA+ + +
Sbjct: 215 DTCRKRSLD--------RLCLACNIDVIISALYSGDRTPYSPAQFLYSWWQHSANLASYE 266
Query: 122 QEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQ 181
Q+DAHEF ++D H + +G G + G+ + +F G L+S
Sbjct: 267 QQDAHEFFIALLDGIHES---------EGNGRTPNKDNGDC----QCIAHRVFSGRLRSD 313
Query: 182 VKCLACGAESNKVDEIMDISLDILNS-------------------CSLKEAMQKFFQPEV 222
V C+ CG S D +DISLD+ S C+L + F +PE
Sbjct: 314 VTCMTCGFTSTTYDPCVDISLDMDTSMSSTDVPNKSVRPNENAGKCTLSACLDLFTRPEK 373
Query: 223 LDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI----FGGKIDKAIAFEEVL 278
L + K C NC++ + KQMSI + P +L + +KRFE KID + F L
Sbjct: 374 LGSDQKLYCQNCEEKRDSFKQMSIKRLPLVLSLHIKRFEHSPVRKLSRKIDWHLQFPFSL 433
Query: 279 VLSSFMCKA----------------SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIG 322
++S++ + D E+++F I HSG +SGHY Y++
Sbjct: 434 DMTSYLSSSILRKRFGNRIFAFDSDEADTSAEFEIFAVITHSGML-ESGHYVTYLR-LRN 491
Query: 323 RWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+WY C+D++++ V + + Y++F+++
Sbjct: 492 QWYKCDDAWITEVDETIVRASQCYMIFYVQ 521
>gi|392580119|gb|EIW73246.1| hypothetical protein TREMEDRAFT_22812, partial [Tremella
mesenterica DSM 1558]
Length = 323
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 167/359 (46%), Gaps = 49/359 (13%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQ 66
+ +SW P +L +KR GL N +CY N+ LQ L +TPP Q S
Sbjct: 1 MDLSW-PEILRGTKKRAA---GLYNPSQACYANATLQVLFHTPPFLRIASAHQSQS---- 52
Query: 67 LTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAH 126
E K C C L S + P ++ + L + F +QEDAH
Sbjct: 53 --------CENKGWCMLCALRTTGDEHWSRQGSY-MPKEVHNHLSQIHKGFNKHKQEDAH 103
Query: 127 EFLRYVIDACHNTCL--RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
EF R+V DA T L R K L K S+ V +++GG ++S+V C
Sbjct: 104 EFFRFVTDALQATALAGRPKDLPAKIKNSTW--------------VYKLWGGQVRSRVIC 149
Query: 185 LACGAESNKVDEIMDISLDIL--NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
C S+ D +D+SLD+ S+ +++F + + L+G NKY C+NCK+ A+K
Sbjct: 150 DRCSTPSDTFDTFLDLSLDVPPNRKPSVLSMLREFCKDDKLEGENKYNCENCKRKADAKK 209
Query: 243 QMSILQSPNILVIQLKRFE---GIFGGKIDKA-----IAFEEVLVLSSFMCKASQDPQPE 294
I +P +L + LKRF FG K + I F E L +++FM + ++
Sbjct: 210 SFRISHAPPVLTLHLKRFNVRYNSFGNKANAEKYSGFIEFGEWLDIANFMSEGTK----- 264
Query: 295 YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK-VYILFFIR 352
Y+LFG H G GHY +Y++ G+WY +D +S EVL +K Y+L +IR
Sbjct: 265 YRLFGVTCHRGAELRFGHYTSYVRGPSGQWYHADDEDMSAVRQDEVLRDKQAYLLSYIR 323
>gi|215736860|dbj|BAG95789.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 750
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 117/187 (62%), Gaps = 3/187 (1%)
Query: 168 SVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNN 227
S+V +IFGG L+SQVKC C SNK D +D+SLDI + SL A+Q F E+LDG
Sbjct: 28 SLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEELLDGGE 87
Query: 228 K-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF-GGKIDKAIAFEEVLVLSSFMC 285
K Y+C C+K V A+K+ +I ++P +L I LKRF KIDK + F+ +L L F+
Sbjct: 88 KQYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPMLDLKPFIS 147
Query: 286 KASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKV 345
S+ +Y L+G +VH+G++ SGHYY +++ + G W+ +D+ V +VL +K
Sbjct: 148 D-SKGADFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKA 206
Query: 346 YILFFIR 352
Y+LF++R
Sbjct: 207 YMLFYVR 213
>gi|390363573|ref|XP_781718.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3
[Strongylocentrotus purpuratus]
Length = 503
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 163/348 (46%), Gaps = 35/348 (10%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRNLGN+C++N+VLQ L+ + L L T + R + L
Sbjct: 146 GLRNLGNTCFMNAVLQSLSNINQFCGYFKDLPAVELRSGKTAGKRIYNTRNMKHDDVSLV 205
Query: 88 KRIVRSLSV----DLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
+ I ++L D T +P + + + F+ +Q+DAHEF+RY++D
Sbjct: 206 EEIRKTLCALWQGDQTAISPDSLFTVMWKIFPRFRGYQQQDAHEFMRYLLD--------- 256
Query: 144 KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
+L + GS+ + NG +++V IFGG L S+V C CG+ K+D +D+SLD
Sbjct: 257 -RLHTELQGSTWPTTPKKQTNGHATIVSVIFGGLLLSEVTCRPCGSLYKKIDPFLDVSLD 315
Query: 204 ILNS-------------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSP 250
I C L++ MQ F E L+ +Y C C++ + K+ + P
Sbjct: 316 IPERFRPRSKNKDGSQVCRLQDCMQSFIAVEELEETEQYMCPKCQQRQPSTKKFWLKAIP 375
Query: 251 NILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFM----CKASQDPQPEYKLFGTIVH 303
N+L I LKRF G KID + F + L + FM C+ Y L IVH
Sbjct: 376 NVLCIHLKRFTWSGFLRTKIDTYVQFPMKGLDIQPFMLGPECQDENVSTTVYDLAAVIVH 435
Query: 304 SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 351
G +GHY A+ + G+WYC NDS V+ + + K YILF++
Sbjct: 436 QGSGAGAGHYIAFAVNN-GQWYCFNDSTVTPVEEKVITRCKAYILFYV 482
>gi|268569258|ref|XP_002640473.1| Hypothetical protein CBG13606 [Caenorhabditis briggsae]
Length = 538
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 166/342 (48%), Gaps = 33/342 (9%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GLRNLGN+C++N+VLQ L + L L + + ++ E+ + C
Sbjct: 220 PRGLRNLGNTCFMNAVLQALACIKDFREYILNLP--------SLEDYVEDEKIAQNGNCF 271
Query: 86 LE---KRIVRSLSVDLTLD--APAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
L ++++ S+S D +P + + F+ RQ D+HEFLRY++D H
Sbjct: 272 LTDEYQKLLASMSARNFRDPTSPNEFREAFVSACPRFRGFRQHDSHEFLRYLLDQMHTEM 331
Query: 141 LRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDI 200
+ + L E + ++ + + F G LQS V C C SNK+D+ MD+
Sbjct: 332 RKCRNL-------------PEMPDDKTTPISKSFEGTLQSSVICQTCRNVSNKMDDFMDL 378
Query: 201 SLDILNSCS----LKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQ 256
SLD+ L + + FFQ E+L+ K +C CK + KQM I + P +L +
Sbjct: 379 SLDVPRVSKARYRLSDCLDLFFQRELLEKGEKPECSKCKSKQTCSKQMFIKKLPEVLCLH 438
Query: 257 LKRFEGIFGGKIDKAIAFEEV-LVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYA 315
+KRF GGKID I F L + F+ + S +P Y+L IVH G+ SGHY A
Sbjct: 439 IKRFRDN-GGKIDTLIEFPLTGLSVDDFLTEDSDEPPCVYELHSIIVHIGYGCSSGHYIA 497
Query: 316 YIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
+ + +WY +D+ V + ++ Y+L + ++ ++P
Sbjct: 498 FGRRG-AKWYQFDDTVVKAMETSNITKQRAYVLMYTKSTRKP 538
>gi|417402232|gb|JAA47969.1| Putative ubiquitin carboxyl-terminal hydrolase 3 [Desmodus
rotundus]
Length = 520
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 170/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 160 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 216
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 217 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 273
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ ING S+VV IFGG LQ++V CL CG
Sbjct: 274 -----LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICG 328
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 329 TESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKC 388
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
+K + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 389 RKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 447
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY K GRW+ NDS V+++ V+ K YIL
Sbjct: 448 GPENCLYDLAAVVVHHGSGVGSGHYTAYAKHE-GRWFHFNDSTVTLADEDTVVKAKAYIL 506
Query: 349 FFI 351
F++
Sbjct: 507 FYV 509
>gi|224010108|ref|XP_002294012.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970684|gb|EED89021.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1472
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 179/363 (49%), Gaps = 39/363 (10%)
Query: 22 RGGPP----LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAER 77
RG PP +GL NLGNSCY+NS+LQC+ + P + + LK ++ K++ ++ L +
Sbjct: 1085 RGVPPAPGSVGLHNLGNSCYMNSILQCINHIPSITQYFLKGEYQ---KEVNKNNPLGSGG 1141
Query: 78 KRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACH 137
K + I + + ++ AP ++ + +A F Q D+ EF +Y++D H
Sbjct: 1142 KVATAYASFLNDI---WTGEYSILAPRLLKQIVGCYAPQFNNNYQHDSQEFHQYLMDGLH 1198
Query: 138 NTCLRLKK---------LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
R+K L K ++ + S V + G +S + C +CG
Sbjct: 1199 EDLNRVKDKPYVEDVEALGMKDDRAAIESWKKHLLRHDSLFV-DYTQGLHRSHLTCPSCG 1257
Query: 189 AESNKVDEIMDISLDILNS-----CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
ES K D ISL ++ S L++ + +F E LD +N + C CKK V A K
Sbjct: 1258 KESIKFDVYSSISLPLVPSKNRPSIPLEDCLDQFAAGEQLDEHNAWYCSGCKKHVCALKL 1317
Query: 244 MSILQSPNILVIQLKRFE---------GIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQ- 292
+++ +P++LV+ LKRF I KI+ + F + L L+ ++ +DP
Sbjct: 1318 ITLWNTPDVLVLHLKRFTYEKCSQVDGRIIRSKIEDKVDFPIDRLDLTPYVL-GPKDPDA 1376
Query: 293 -PEYKLFGTIVHSGFSPDSGHYYAYIKDA-IGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
P YKLFG H+G + +SGHY A ++++ G WY NDS+V ++ ++ Y+LF+
Sbjct: 1377 PPIYKLFGVSEHTGATANSGHYTATVRNSKDGNWYRYNDSHVGTTSGDAAVTGGAYLLFY 1436
Query: 351 IRA 353
RA
Sbjct: 1437 QRA 1439
>gi|327286811|ref|XP_003228123.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Anolis
carolinensis]
Length = 533
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 178/365 (48%), Gaps = 55/365 (15%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFC--------LKLQHSSLCKQLT------GDSAL 73
GLRNLGN+C++N++LQ L+ + FC ++L++ + T GD+ +
Sbjct: 161 GLRNLGNTCFMNAILQSLS---NIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNGV 217
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
+ C L + + S + KI +F+ +Q+DAHEF+RY++
Sbjct: 218 SLVEEFRKTLCALWQGSQAAFSPESLFYVVWKIMP-------NFRGYQQQDAHEFMRYLL 270
Query: 134 DACH-------NTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLA 186
D H N R L ++ G S GG ING S+VV IFGG LQ++V CL
Sbjct: 271 DHLHRELQGGFNGVSRSSVLLQENSGLSAGGRC--CINGASTVVTAIFGGILQNEVNCLI 328
Query: 187 CGAESNKVDEIMDISLDILN--------------SCSLKEAMQKFFQPEVLDGNNKYKCD 232
CG ES K D +D+SLDI + +C+L++ ++ F E LD Y C
Sbjct: 329 CGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPTCTLRDCLRSFTDLEELDETELYMCH 388
Query: 233 NCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQ 289
CKK + K+ I + P +L + LKRF K+D + F L + F+ + +
Sbjct: 389 KCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCFLLEP-E 447
Query: 290 DPQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 346
+ +PE Y L +VH G SGHY AY GRW+ NDS V+++ + VL K Y
Sbjct: 448 NSRPENCLYDLAAVVVHHGSGVGSGHYTAYAAHE-GRWFHFNDSTVTLTDEETVLRAKAY 506
Query: 347 ILFFI 351
ILF++
Sbjct: 507 ILFYV 511
>gi|145545853|ref|XP_001458610.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426431|emb|CAK91213.1| unnamed protein product [Paramecium tetraurelia]
Length = 503
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 188/392 (47%), Gaps = 30/392 (7%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFC-- 84
GL NLGN+C+LNS +Q L+ T PL ++ + H K++ ++ L ++ F
Sbjct: 68 FGLTNLGNTCFLNSSIQALSNTQPLTDYFMSQLH---IKEINPENPLSSQGNIVKSFAQL 124
Query: 85 --ILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR 142
+L +++ + D+ + P + S + + F G QEDAHEF+ +++D H R
Sbjct: 125 IRLLWQKVDQYQYDDMKVLKPTQFISTVGNYNPIFAEGTQEDAHEFIAFLLDMIHEDLNR 184
Query: 143 LKK--------LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKV 194
+KK + + ++ S++ ++F G + + CL C +
Sbjct: 185 IKKKPYVEQAKFTKFPTNEDADAEWKKYLSRNQSIIVDLFQGQMLDTLSCLTCKSSRYCF 244
Query: 195 DEIMDISLDILN-SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
+ M +S+ +LN C L+E +++F + E L G+ + C NC + + K++ + PNIL
Sbjct: 245 EPFMYLSVPVLNRECELQECIEEFLKKETLKGDEGWNCTNCNQRRDSNKKIDLWSMPNIL 304
Query: 254 VIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS 310
+I LKRF+ F KI + + + L + +C Q +P Y L+ I HSG + S
Sbjct: 305 IIHLKRFKFNSQFRAKIRSLVKYPLQNLSFENLVC-TKQVEKPTYDLYAVINHSG-TLTS 362
Query: 311 GHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGV 369
GHY AY K+ WY NDS V+ E L++ Y+LF+ + + V G+
Sbjct: 363 GHYTAYGKNRDDLHWYHFNDSLVTPVQQPESLND-AYLLFYFKNS---VEEFKRQTLEGI 418
Query: 370 KSHENGKEAYKGVKGTVPLKAVATKPSAEQSS 401
N + K +K T+ +K ++QS+
Sbjct: 419 ----NVSQKRKTIKNTIVIKQTMLNMHSQQSN 446
>gi|281201291|gb|EFA75503.1| peptidase C19 family protein [Polysphondylium pallidum PN500]
Length = 643
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 119/196 (60%), Gaps = 4/196 (2%)
Query: 140 CLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMD 199
+ L K RK G G ++V+ IFGG LQSQVKC C ESN D MD
Sbjct: 202 AMMLWKTIRKVGSGLNNIGSLNPRESMTTVIGSIFGGYLQSQVKCSVCSYESNTFDPFMD 261
Query: 200 ISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
+S+DI + SL +A+Q+F + E LDG+NKYKC CKKLV A K+M+I +P +L +QLKR
Sbjct: 262 LSVDINQADSLSKALQRFVKAEQLDGSNKYKCCKCKKLVKASKRMTIHVAPPVLTVQLKR 321
Query: 260 FE--GIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYI 317
F G GGKI K + F+ VL L+ +M ++ D Y L+G +VH+G S +SGHYY Y
Sbjct: 322 FSFLGFHGGKISKPVQFDPVLNLTPYMTTSTND--VVYDLYGVLVHAGSSTNSGHYYCYT 379
Query: 318 KDAIGRWYCCNDSYVS 333
K + G W+ ND VS
Sbjct: 380 KSSSGVWHGLNDESVS 395
>gi|147838237|emb|CAN78307.1| hypothetical protein VITISV_005598 [Vitis vinifera]
Length = 494
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/280 (34%), Positives = 141/280 (50%), Gaps = 32/280 (11%)
Query: 21 KRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
K G PP GL N GNSC+ N VLQCL YT PL + L+ H C+ R
Sbjct: 208 KPGFPPCGLINCGNSCFANVVLQCLAYTRPLVAYLLEKGHRRQCR-----------RNDW 256
Query: 81 CPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
C C + + R+ +P I S L + G+QEDAHEF+R+ ID + C
Sbjct: 257 CFLCEFQVHVERASHSPXPF-SPINILSRLPSIGGNLGYGKQEDAHEFMRFAIDTMQSVC 315
Query: 141 LRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDI 200
L GG S ET ++++ IFGG LQSQV C C SN+ + +MD+
Sbjct: 316 LD-----EFGGEKSVHPSSQET-----TLIQHIFGGHLQSQVICTKCSKISNQYENMMDL 365
Query: 201 SLDIL-NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
+++I ++ SL+E + +F E L G N YKCD C V A K++++ +PNIL I LKR
Sbjct: 366 TVEIHGDAASLEECLDQFTVTEWLHGENMYKCDGCNDYVKASKRLTVRHAPNILTIALKR 425
Query: 260 FEGIFGGKIDKAIAFEEVLVLSSFMCKASQ--DPQPEYKL 297
F+ + ++VL ++M S+ QP+++
Sbjct: 426 FQ-------VTRVELDDVLSQGAYMLLYSRGKSQQPDHQF 458
>gi|241628902|ref|XP_002410027.1| ubiquitin-specific protease, putative [Ixodes scapularis]
gi|215503290|gb|EEC12784.1| ubiquitin-specific protease, putative [Ixodes scapularis]
Length = 340
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 166/348 (47%), Gaps = 31/348 (8%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGD---SALDAERKRECPF 83
LGLRNLGN+C++NS++QCL +T PL +CLK ++S +T + +A F
Sbjct: 1 LGLRNLGNTCFMNSIVQCLAHTRPLLEYCLKDCYTSEINNITSSNRGALFEA-------F 53
Query: 84 CILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
L K I RS + + + +P +S ++ FA F Q+D+ EFL Y++ H R+
Sbjct: 54 ATLMKSIWRSSNGEYAI-SPQAFRSQIQKFAPRFMGYSQQDSQEFLHYLLQGLHEDINRI 112
Query: 144 KKLRRK---------GGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKV 194
R + S + + F G L+S +KC CG +S
Sbjct: 113 TSRPRHVTTEIDDNLSDSQKAAEAWKRYLRFDDSKIVDCFVGQLKSTLKCSVCGHKSVTF 172
Query: 195 DEIMDISLDI---LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPN 251
D D+SL I +S ++++ + F + EVLDG+ K C NCK K +I + P
Sbjct: 173 DPFWDLSLPIPKSSDSVTIQQCLSLFTKEEVLDGDEKPTCSNCKTRQRCTKSFTIHRCPK 232
Query: 252 ILVIQLKRFE--GIFGGKIDKAIAFEEV-LVLSSFMCKASQDPQPEYKLFGTIVHSGFSP 308
ILV+ LKRF F K++ + F L L +M S Y L+ HSG S
Sbjct: 233 ILVLHLKRFSPGERFRAKLNTRVEFPLTNLDLCPYM---SNSHYVMYNLYAVSNHSG-ST 288
Query: 309 DSGHYYAY-IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQ 355
SGHY A + G W+ CND+ V+ + V S + Y+LF+ A Q
Sbjct: 289 YSGHYTATCLHPKSGEWHECNDTKVTEVSSSRVASSEAYVLFYEAATQ 336
>gi|11993482|gb|AAG42759.1|AF302669_1 ubiquitin-specific protease 21 [Arabidopsis thaliana]
Length = 737
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 171/362 (47%), Gaps = 44/362 (12%)
Query: 1 MGLAHELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQH 60
M LQ+SW + + G GL N GN+C++ SVLQC T+T PL + +
Sbjct: 141 MEPTKPLQLSW----WYPRIEPTGVGAGLYNSGNTCFIASVLQCFTHTVPLIDSLRSFMY 196
Query: 61 SSLCKQLTGDSALDAERKRECPFCILE------KRIVRSLSVDLTLDAPAKIQSCLRIFA 114
+ C G+ FC+++ + +RS + +D + + L F+
Sbjct: 197 GNPCN--CGNEK----------FCVMQALRDHIELALRSSGYGINID---RFRDNLTYFS 241
Query: 115 EHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIF 174
F QEDAHEFL+ +D CL K + G + +N +V +F
Sbjct: 242 SDFMINHQEDAHEFLQSFLDKLERCCLDPK--------NQLGSVSSQDLN----IVDNVF 289
Query: 175 GGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNC 234
GG L S + C C + SN + + SL+I + +L +A++ F E L+ ++ CDNC
Sbjct: 290 GGGLMSTLCCCNCNSVSNTFEPSLGWSLEIEDVNTLWKALESFTCVEKLE--DQLTCDNC 347
Query: 235 KKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 292
K+ V+ KQ+ + P + LKRF +G+ KI I F L LS FM ++ DP+
Sbjct: 348 KEKVTKEKQLRFDKLPPVATFHLKRFTNDGVTMEKIFDHIEFPLELDLSPFM-SSNHDPE 406
Query: 293 --PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
Y L+ + H G GHY +Y++ A W+ +DS V+ + + VLS YILF+
Sbjct: 407 VSTRYHLYAFVEHIGIRATFGHYSSYVRSAPETWHNFDDSKVTRISEERVLSRPAYILFY 466
Query: 351 IR 352
R
Sbjct: 467 AR 468
>gi|194227923|ref|XP_001494487.2| PREDICTED: hypothetical protein LOC100063066 [Equus caballus]
Length = 1112
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 165/363 (45%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 753 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR-----------CEMPSPELCLVCEMS 801
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 802 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 854
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G +QS V C AC S +D DISLD+ S
Sbjct: 855 -KG---DDAGKAANNPNHCNCIIDQIFTGGMQSDVTCQACHGVSTTIDPCWDISLDLPGS 910
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 911 CTSFWPMSPGRESSVNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 970
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 971 LTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTN 1030
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 1031 SGNDENKYSLFAVVNHQG-TLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 1089
Query: 348 LFF 350
LF+
Sbjct: 1090 LFY 1092
>gi|344292651|ref|XP_003418039.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
[Loxodonta africana]
Length = 914
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 165/363 (45%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 555 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRC-----------EMPSPELCLVCEMS 603
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 604 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 656
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 657 -KGDDV---GKAASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 712
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L N K KC +C+ + KQ
Sbjct: 713 CTSFWPVSPGRESSVNGESHIPGITTLTDCLRRFTRPEHLGSNAKIKCGSCQSYQESTKQ 772
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCK--------------A 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 773 LTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTS 832
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 833 SGNNENKYSLFAVVNHQG-TLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 891
Query: 348 LFF 350
LF+
Sbjct: 892 LFY 894
>gi|18422708|ref|NP_568667.1| ubiquitin carboxyl-terminal hydrolase 21 [Arabidopsis thaliana]
gi|75262521|sp|Q9FIQ1.1|UBP21_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; Short=AtUBP21; AltName:
Full=Ubiquitin thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|9758510|dbj|BAB08918.1| unnamed protein product [Arabidopsis thaliana]
gi|332008037|gb|AED95420.1| ubiquitin carboxyl-terminal hydrolase 21 [Arabidopsis thaliana]
Length = 732
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 171/362 (47%), Gaps = 44/362 (12%)
Query: 1 MGLAHELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQH 60
M LQ+SW + + G GL N GN+C++ SVLQC T+T PL + +
Sbjct: 141 MEPTKPLQLSW----WYPRIEPTGVGAGLYNSGNTCFIASVLQCFTHTVPLIDSLRSFMY 196
Query: 61 SSLCKQLTGDSALDAERKRECPFCILE------KRIVRSLSVDLTLDAPAKIQSCLRIFA 114
+ C G+ FC+++ + +RS + +D + + L F+
Sbjct: 197 GNPCN--CGNEK----------FCVMQALRDHIELALRSSGYGINID---RFRDNLTYFS 241
Query: 115 EHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIF 174
F QEDAHEFL+ +D CL K + G + +N +V +F
Sbjct: 242 SDFMINHQEDAHEFLQSFLDKLERCCLDPK--------NQLGSVSSQDLN----IVDNVF 289
Query: 175 GGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNC 234
GG L S + C C + SN + + SL+I + +L +A++ F E L+ ++ CDNC
Sbjct: 290 GGGLMSTLCCCNCNSVSNTFEPSLGWSLEIEDVNTLWKALESFTCVEKLE--DQLTCDNC 347
Query: 235 KKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 292
K+ V+ KQ+ + P + LKRF +G+ KI I F L LS FM ++ DP+
Sbjct: 348 KEKVTKEKQLRFDKLPPVATFHLKRFTNDGVTMEKIFDHIEFPLELDLSPFM-SSNHDPE 406
Query: 293 --PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
Y L+ + H G GHY +Y++ A W+ +DS V+ + + VLS YILF+
Sbjct: 407 VSTRYHLYAFVEHIGIRATFGHYSSYVRSAPETWHNFDDSKVTRISEERVLSRPAYILFY 466
Query: 351 IR 352
R
Sbjct: 467 AR 468
>gi|335306036|ref|XP_003135145.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like [Sus
scrofa]
Length = 904
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 168/363 (46%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H C+ + + C C +
Sbjct: 545 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR--CEMPSPEL---------CLVCEMS 593
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 594 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 646
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 647 -KG---DDAGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 702
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 703 CTSFWPMSPGRESSVNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 762
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 763 LTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTN 822
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 823 SGNDENKYSLFAVVNHQG-TLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 881
Query: 348 LFF 350
LF+
Sbjct: 882 LFY 884
>gi|348532572|ref|XP_003453780.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Oreochromis niloticus]
Length = 403
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 169/341 (49%), Gaps = 28/341 (8%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQH-SSLCKQLTGDSALDAERKRECPFCI 85
+GLRNLGN+C++NS+LQCL+ T L ++CL+ H + L ++AL E F
Sbjct: 59 VGLRNLGNTCFMNSILQCLSNTLELRDYCLRNCHITDLNNNCRSNTALIEE------FAK 112
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLK- 144
L + + S + + +P++ ++ ++ A F Q+DA EFLR+++D HN R+
Sbjct: 113 LTQSLWTSANNEPI--SPSEFRNQVQRCAPKFVGCNQQDAQEFLRFLLDGLHNEVNRVTV 170
Query: 145 -------KLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEI 197
G + S V ++F G L+S + C ACG S D
Sbjct: 171 RPKVSVLDFDHLADDEKGRRMWNMYLAREDSKVVDLFVGQLKSSLTCTACGFRSTVFDPF 230
Query: 198 MDISLDILNSCS----LKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
D+S+ I S LK+ ++ F + +VLDG + C CK K+ SI + P IL
Sbjct: 231 WDLSIPIAQKISGEVTLKDCLRLFTKEDVLDGEERPTCTKCKARRKCTKRFSIQKFPQIL 290
Query: 254 VIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS 310
V+ LKRF + K+ + F + L L F + S+ +P Y L+ HSG +
Sbjct: 291 VLHLKRFSDSNVRASKLSTYVNFPLKDLDLREFASEPSE--RPVYNLYAVSNHSG-NALG 347
Query: 311 GHYYAYIKD-AIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
GHY AY K+ A+G WY NDS VS + +V S Y+LF+
Sbjct: 348 GHYTAYCKNPALGEWYSYNDSRVSPMSSSQVRSSNAYVLFY 388
>gi|426358871|ref|XP_004046713.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Gorilla gorilla gorilla]
Length = 355
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 120/189 (63%), Gaps = 1/189 (0%)
Query: 167 SSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGN 226
++++ +IFGG +SQ+KCL C S+ D +DI+LDI + S+K+A+++ +PE L+G
Sbjct: 15 TTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGE 74
Query: 227 NKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCK 286
N Y+C C + A K +++ S +L++ LKRF + G K+ K + + E L + +M +
Sbjct: 75 NAYQCGLCLQKAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQ 134
Query: 287 ASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 346
+ P Y L+ +VH+G+S SGHY +Y+K G+WY +D+ V+ S + VLS++ Y
Sbjct: 135 QNTGPLV-YVLYAVLVHAGWSCHSGHYLSYVKAQEGQWYKMDDAEVTASGITSVLSQQAY 193
Query: 347 ILFFIRANQ 355
+LF+I+ ++
Sbjct: 194 VLFYIQKSE 202
>gi|395854546|ref|XP_003799748.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
[Otolemur garnettii]
Length = 888
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 168/363 (46%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H C+ + + C C +
Sbjct: 529 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR--CEMPSPEL---------CLVCEMS 577
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 578 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 630
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 631 -KGDDV---GKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 686
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 687 CTSFWPMSPGRESSVNGESHISGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 746
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 747 LTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTN 806
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 807 SGNNENKYSLFAVVNHQG-TLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 865
Query: 348 LFF 350
LF+
Sbjct: 866 LFY 868
>gi|340727179|ref|XP_003401926.1| PREDICTED: hypothetical protein LOC100649397 [Bombus terrestris]
Length = 977
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/350 (32%), Positives = 173/350 (49%), Gaps = 28/350 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRN+GN+C++NSV+QCL+ T PL + L Q+ L T S++ + I E
Sbjct: 639 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQY--LADINTSTSSMKGALIKAFSQVIHE 696
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ + DL ++ A ++S ++ FA F Q+DA EFLRY+++ H R+
Sbjct: 697 ---LWEVGGDLVVNTTA-LKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKP 752
Query: 148 RK---------GGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ + S++ ++F G L+S + C +C S +D
Sbjct: 753 QPIHTDIPEMYTDSQKAVESWKRYLRSEDSMIVDVFVGQLRSSLHCTSCDHVSVTLDPFW 812
Query: 199 DISLDI---LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVI 255
D+SL I + L + ++ F + EVLDG+ K C C+ K SI + P ILVI
Sbjct: 813 DLSLPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVI 872
Query: 256 QLKRFEGI--FGGKIDKAIAFEEV-LVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGH 312
LKRF + F K++ + F L LS+F A + P Y L+G HSG + SGH
Sbjct: 873 HLKRFSPMERFRSKLNVMVDFPLTGLDLSAFA--APRVPGCTYNLYGVANHSG-TTHSGH 929
Query: 313 YYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSAN 361
Y AY K G W+ NDS VSV + V+S + Y+LF+ Q+P S++
Sbjct: 930 YTAYCKHPYSGEWHEYNDSRVSVVPARSVVSNEAYVLFY---EQQPHSSH 976
>gi|323447154|gb|EGB03098.1| hypothetical protein AURANDRAFT_2843 [Aureococcus anophagefferens]
Length = 277
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 156/323 (48%), Gaps = 46/323 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LN+ +QCL + P +A Q GD +L A+ ++ L
Sbjct: 1 GLVNLGNTCFLNATIQCLAHAPGVA-------------QTLGDESLHAQAQKPDVAVALR 47
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ T P ++ LR + F+ GRQEDAHEFL ++DA
Sbjct: 48 DALGGVFGASRTFK-PRELVKRLRAVGDQFQPGRQEDAHEFLLALLDAVE---------- 96
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
++ ++ V+ +FGG S ++C C ES + +D+SL+
Sbjct: 97 -------------PPLSSTANPVRAVFGGRTSSTLRCPECDYESATEEPFLDLSLE--PK 141
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGK 267
+L A+ F PE L+ N+++ C C + V K++ + +P LV+ L R++G GGK
Sbjct: 142 PTLARALDAFTAPEELE-NDEWCCRCCGERVRPTKRLGVAAAPKALVVHLNRYDGR-GGK 199
Query: 268 IDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I++ +AFE L L + A+ Y L G +VH G S GHY A+ + G W C
Sbjct: 200 IEEHVAFEPRLELETTDGGAAS-----YGLVGVLVHRGQSTRCGHYTAFCRTRSGAWSCF 254
Query: 328 NDSYVSVSTLQEVLSEKVYILFF 350
+D+ V T EVL ++ Y+LF+
Sbjct: 255 DDAAVRTCTFAEVLRQEAYMLFY 277
>gi|350424674|ref|XP_003493875.1| PREDICTED: hypothetical protein LOC100741560 [Bombus impatiens]
Length = 979
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/350 (32%), Positives = 173/350 (49%), Gaps = 28/350 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRN+GN+C++NSV+QCL+ T PL + L Q+ L T S++ + I E
Sbjct: 641 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQY--LADINTSTSSMKGALIKAFSQVIHE 698
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ + DL ++ A ++S ++ FA F Q+DA EFLRY+++ H R+
Sbjct: 699 ---LWEVGGDLVVNTTA-LKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKP 754
Query: 148 RK---------GGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ + S++ ++F G L+S + C +C S +D
Sbjct: 755 QPIHTDIPEMYTDSQKAVESWKRYLRSEDSMIVDVFVGQLRSSLHCTSCDHVSVTLDPFW 814
Query: 199 DISLDI---LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVI 255
D+SL I + L + ++ F + EVLDG+ K C C+ K SI + P ILVI
Sbjct: 815 DLSLPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVI 874
Query: 256 QLKRFEGI--FGGKIDKAIAFEEV-LVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGH 312
LKRF + F K++ + F L LS+F A + P Y L+G HSG + SGH
Sbjct: 875 HLKRFSPMERFRSKLNVMVDFPLTGLDLSAFA--APRVPGCTYNLYGVANHSG-TTHSGH 931
Query: 313 YYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSAN 361
Y AY K G W+ NDS VSV + V+S + Y+LF+ Q+P S++
Sbjct: 932 YTAYCKHPYSGEWHEYNDSRVSVVPARSVVSNEAYVLFY---EQQPHSSH 978
>gi|341875422|gb|EGT31357.1| hypothetical protein CAEBREN_29462 [Caenorhabditis brenneri]
Length = 551
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 160/341 (46%), Gaps = 29/341 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKL----QHSSLCKQLTGDSALDAERKREC 81
P G+RNLGN+C++N+VLQ L ++ + L + G+ L E ++
Sbjct: 231 PRGMRNLGNTCFMNAVLQALGSITEFVDYIMTLPPLEDYMEEASGKNGNCYLTDEYRK-- 288
Query: 82 PFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL 141
+L VR+ P + F+ RQ DAHEF++Y++D H
Sbjct: 289 ---LLHTMSVRNFREPCN---PGPFREAFVSVCTRFRGFRQHDAHEFMKYLLDQMHTELK 342
Query: 142 RLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDIS 201
+ K L + + + F G LQS V C CG SNK+DE D+S
Sbjct: 343 KCKNLPEMPED-----------DEKVTPLSRHFEGMLQSSVVCQVCGNCSNKLDEFWDLS 391
Query: 202 LDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQL 257
LDI L + + FF+ E+L+ +K C C + KQ+ I + P +L +Q+
Sbjct: 392 LDIPRISKPRIRLSDCLSDFFKKEILEKGDKPMCSKCNTKQTCSKQLFIKKLPEVLCLQI 451
Query: 258 KRFEGIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAY 316
KRF+ GGKID I F + L + F+ + S +P Y+L IVH G+ SGHY A+
Sbjct: 452 KRFKD-GGGKIDTLIEFPMQSLSVDEFLTEDSDEPPCTYELQSIIVHVGYGCQSGHYVAF 510
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
+ +WY +D+ V+ + + +K Y+L + + ++P
Sbjct: 511 GRRGGAKWYHFDDTKVTTAEPSLISKQKAYLLLYTKTTRQP 551
>gi|357620428|gb|EHJ72623.1| hypothetical protein KGM_20167 [Danaus plexippus]
Length = 563
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 175/383 (45%), Gaps = 83/383 (21%)
Query: 16 LSEKRKRGGPPLGLRNLGNSCYLNSVLQCLT-------YTPPLANFCLK-----LQHS-S 62
L+ K ++ +GL+NLGN+C++N+VLQ L Y L + +K + HS S
Sbjct: 213 LNGKSQKDKKIVGLKNLGNTCFMNAVLQSLNNIQEFSYYFSQLPSLEMKTNGRKVYHSRS 272
Query: 63 LCKQLTGDSALDAERKR------------------ECPFCILEKRIVRSLSVDLTLDAPA 104
+Q D + E ++ EC F ++ K + R
Sbjct: 273 YTRQEMHDVVMAEELRKVLINLNTGGCGSKAAISPECLFLVIWKVVPR------------ 320
Query: 105 KIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETIN 164
F+ +Q+DAHEFLRY++D H +L R +G +
Sbjct: 321 ------------FRGYQQQDAHEFLRYMLDRLHTELQQLVPDRPEG------------VK 356
Query: 165 GGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS------CSLKEAMQKFF 218
+S+V +FGG LQS+V+CLACG ES K D +D+SL++ S SL + + F
Sbjct: 357 APASIVTAVFGGTLQSEVRCLACGTESKKFDPFLDLSLELPESGRHDAPVSLTDCLASFV 416
Query: 219 QPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFEE 276
Q E L +Y C +CK + KQ I + PN+L + LKRF F K+D +I+F
Sbjct: 417 QIEELADTERYFCSSCKCKQKSTKQFWIRRLPNVLCLHLKRFRWHNYFRTKVDTSISFPL 476
Query: 277 V-LVLSSFMCKASQDPQPE------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCND 329
+ L +S F+ D + Y L IVH G SGHY A+ + +W+ ND
Sbjct: 477 LSLDMSGFVLPNVPDTRRSGRGSLLYDLAAVIVHHGSGAGSGHYTAFAINE-EQWFHFND 535
Query: 330 SYVSVSTLQEVLSEKVYILFFIR 352
V + V S K YILF+IR
Sbjct: 536 QTVRATDSAAVASCKPYILFYIR 558
>gi|297791015|ref|XP_002863392.1| ubiquitin-specific protease 21 [Arabidopsis lyrata subsp. lyrata]
gi|297309227|gb|EFH39651.1| ubiquitin-specific protease 21 [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 171/364 (46%), Gaps = 44/364 (12%)
Query: 7 LQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQ 66
LQ+SW + + G GL N GN+C++ SVLQC T+T PL + + C
Sbjct: 126 LQLSW----WYPRIEPTGVGAGLYNSGNTCFIASVLQCFTHTVPLIESLRSYMYQNPCN- 180
Query: 67 LTGDSALDAERKRECPFCILE------KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCG 120
G+ FC+++ + +RS + +D + + L F+ F
Sbjct: 181 -CGNEK----------FCVMQALRDHIELALRSSGHGINID---RFRDNLTHFSSDFMIN 226
Query: 121 RQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQS 180
QEDAHEFL+ +D CL K G ++ ++V +FGG L S
Sbjct: 227 HQEDAHEFLQSFLDKLERCCLDPK------------NEPGSILSQDMNIVDNVFGGGLMS 274
Query: 181 QVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSA 240
+ C C + SN + + SL+I + +L A++ F + E L+ ++ CDNCK+ V+
Sbjct: 275 TLCCCNCNSVSNTFEPSLGWSLEIEDVDNLWSALESFTRVEKLE--DQLTCDNCKEKVTK 332
Query: 241 RKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ--PEYK 296
KQ+ Q P + LKRF +G+ KI + + F L L FM ++Q+P+ +Y
Sbjct: 333 EKQLKFDQLPPVATFHLKRFKNDGVTMEKIFEHVEFPLELDLLPFM-SSNQNPEVSTKYH 391
Query: 297 LFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
L+ + H G GHY Y++ A W+ +DS V+ + VLS YILF+ R R
Sbjct: 392 LYAFVEHIGIGATFGHYSTYVRSAPETWHNFDDSKVTRISEDRVLSRPAYILFYAREGTR 451
Query: 357 PVSA 360
S+
Sbjct: 452 WFSS 455
>gi|149758441|ref|XP_001487991.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Equus
caballus]
Length = 727
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 169/363 (46%), Gaps = 64/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+ P L +F L +H + +T S C C +
Sbjct: 381 GLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCI---MTSPSL--------CLVCEMS 429
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S T P K+ + I AEH RQ+DAHEFL ++D H
Sbjct: 430 SLFHAMYSGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH---------- 479
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+ G N + ++ +IF G LQS V C AC + S +D DISLD+ S
Sbjct: 480 -RHSKDDSVGQEANNPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGS 538
Query: 208 C-------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
SL + +Q F +PE L + K KC +C+ + K
Sbjct: 539 YATFGSQSPERADSTVSRDDHVPGIPSLTDCLQWFTRPEHLGSSAKIKCSSCQSYQESTK 598
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPE------ 294
Q+++ + P + LKRFE G KI+ I+F L ++ F+ +++D + E
Sbjct: 599 QLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLELDMTPFL-ASTKDSRMEGQLPTD 657
Query: 295 -------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
Y LF I H G + +SGHY ++I+ +W+ C+D+ ++ +T++++L + Y+
Sbjct: 658 CAPNENKYSLFAVINHHG-TLESGHYTSFIRQQKDQWFSCDDAVITKATIEDLLYSEGYL 716
Query: 348 LFF 350
LF+
Sbjct: 717 LFY 719
>gi|413955111|gb|AFW87760.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 813
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 156/323 (48%), Gaps = 21/323 (6%)
Query: 35 SCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSL 94
+C+LN VLQC+ +T PL K H C +++ C +C L+ + +
Sbjct: 141 TCFLNCVLQCMVHTVPLLLKLRKADHPDPCPRVSIGF---------CCYCSLKHHVDECM 191
Query: 95 SVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSS 154
+ + P + L+ + +F+ G Q+DA EFLR ++D + +
Sbjct: 192 RLSGSSFYPEIFVNHLKSISSNFRSGVQQDAQEFLRCLLDKLDEDSIAPRFSEESSSSEE 251
Query: 155 GGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAM 214
+ SVVKEIF G L+SQ++C C S+K + +D+SLD+ +L +A+
Sbjct: 252 ------SSSTEEGSVVKEIFSGCLKSQLRCPECNHYSDKSEPFLDLSLDLNMVETLMDAL 305
Query: 215 QKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAF 274
Q F E++ + CD CK V+ K I Q+P +LVI LKRF F KI + F
Sbjct: 306 QSFTNTELI---KDFMCDGCKSRVNLEKHFKIEQAPEVLVIHLKRFTN-FESKIRDKVKF 361
Query: 275 EEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSV 334
L ++SFM +S D +Y L+G + H G + SGHY YI+ + WY ND V
Sbjct: 362 PIELDINSFM-SSSDDTLQKYDLYGVVEHLG-AYGSGHYVCYIRSSEADWYKFNDDKVCK 419
Query: 335 STLQEVLSEKVYILFFIRANQRP 357
++ L Y+LF+++ P
Sbjct: 420 CSVASALDSAAYLLFYVKQGSSP 442
>gi|297303872|ref|XP_002806289.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Macaca
mulatta]
Length = 487
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 168/363 (46%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H C+ + + C C +
Sbjct: 128 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR--CEMPSPEL---------CLVCEMS 176
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 177 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 229
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 230 -KGDDV---GKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 285
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 286 CTSFWPMSPGRESSVNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 345
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 346 LTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTN 405
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 406 SGNNENKYSLFAVVNHQG-TLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 464
Query: 348 LFF 350
LF+
Sbjct: 465 LFY 467
>gi|345806939|ref|XP_003435526.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like [Canis
lupus familiaris]
Length = 809
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 168/363 (46%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H C+ + + C C +
Sbjct: 450 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR--CEMPSPEL---------CLVCEMS 498
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 499 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 551
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 552 -KG---DDAGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 607
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 608 CTSFWPMSPGRESSVNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 667
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 668 LTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTN 727
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 728 SGNDENKYSLFAVVNHQG-TLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 786
Query: 348 LFF 350
LF+
Sbjct: 787 LFY 789
>gi|355704804|gb|EHH30729.1| hypothetical protein EGK_20499, partial [Macaca mulatta]
gi|355757363|gb|EHH60888.1| hypothetical protein EGM_18779, partial [Macaca fascicularis]
Length = 331
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 163/342 (47%), Gaps = 42/342 (12%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 1 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRC-----------EMPSPELCLVCEMS 49
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 50 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 102
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 103 -KGDDV---GKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 158
Query: 208 --------------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
+L + +++F +PE L + K KC +C+ + KQ+++ + P +
Sbjct: 159 WESSVNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQLTMNKLPVVA 218
Query: 254 VIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA---SQDPQPEYKLFGTIVHSGFSP 308
KRFE KI I+F L ++ FM S + + +Y LF + H G +
Sbjct: 219 CFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASMPTNSGNNENKYSLFAVVNHQG-TL 277
Query: 309 DSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
+SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 278 ESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFY 319
>gi|443706691|gb|ELU02606.1| hypothetical protein CAPTEDRAFT_165719 [Capitella teleta]
Length = 515
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/357 (32%), Positives = 162/357 (45%), Gaps = 42/357 (11%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECP----- 82
GLRNLGN+C++N+VLQ L+ + FC +Q +Q + R C
Sbjct: 153 GLRNLGNTCFMNAVLQSLS---NIQTFCGYIQQLPSLEQKMSKKKITT---RSCTEGNDV 206
Query: 83 FCI--LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
F + L K +V +P + S + F+ +Q+DAHEF+RY++D H
Sbjct: 207 FVVEELRKTLVALWQGSKAAISPESLFSVIWKVVPRFRGYQQQDAHEFMRYLLDRLHTEL 266
Query: 141 LRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDI 200
+ L +S G G SSVV IFGG LQS+V CL CG ES K D +DI
Sbjct: 267 MTLIPYNATVRPNSPYVGSPL---GKSSVVTAIFGGILQSEVNCLICGMESKKHDPFLDI 323
Query: 201 SLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSI 246
SLDI + C L + + F E L+ Y C NCK + K+ I
Sbjct: 324 SLDIPSKFTCKTPNPKNGEIVCDLSDCLSSFTDVEELEDTELYMCANCKCRQRSTKKFWI 383
Query: 247 LQSPNILVIQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMC--------KASQDPQPEY 295
+ PN+L + LKRF K+D I F L ++ FM ++ Q +Y
Sbjct: 384 RRLPNVLCLHLKRFRWSTYLRVKVDTHINFPLRGLEMNHFMLDNLHETRNSSASGSQSKY 443
Query: 296 KLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
L +VH G SGHY +Y G WY NDS V+ + V K YILF++R
Sbjct: 444 DLAAVVVHHGSGAGSGHYTSYAVHE-GGWYHFNDSSVTQCDEETVAKCKAYILFYVR 499
>gi|167527243|ref|XP_001747954.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773703|gb|EDQ87341.1| predicted protein [Monosiga brevicollis MX1]
Length = 1846
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 171/356 (48%), Gaps = 44/356 (12%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPL--ANFCLKLQHSSLCKQLTGDSAL--------DAER 77
GL N+ N+CY+NSV+Q L P A + + + S ++ AL D
Sbjct: 179 GLVNIKNTCYINSVVQVLASLPAFLEAIYAMYAKSSKGIDEMPLTVALLSTLAGIVDRRD 238
Query: 78 KRECPFCI--------LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFL 129
P ++ +V +L+ L A QS + +F G+QEDAHE
Sbjct: 239 LENVPRLFNLGESGSPVQPAMVNALAPIPLLQAVMTKQSTM-VF------GQQEDAHELF 291
Query: 130 RYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGA 189
+ ++ A + G + I +S V ++F + SQ+ C +CG
Sbjct: 292 QMLMHAIIDEL--------------APDGLPKAIQETTS-VHQLFRSIITSQLTCPSCGY 336
Query: 190 ESNKVDEIMDISLDILN-SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQ 248
S+ + +D+ L+I + +L+E ++ F PE LD +NKY+C C +LV A KQ+S+ +
Sbjct: 337 SSSSFESHLDLQLEIEEYTDTLEEMLEAFTCPEQLDKSNKYRCAGCDQLVRAHKQLSLYE 396
Query: 249 SPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP-QPEYKLFGTIVH--SG 305
+PN+L IQLKRF G+ID+ I + L L ++M D + EY+L G I+H G
Sbjct: 397 APNVLAIQLKRFRAGAHGRIDRFIQYPHQLNLKNYMTPGHHDDGKMEYELCGIIIHLTVG 456
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSAN 361
GHY + +K G W CND+Y SV +++ Y+LF+ R RP+ +
Sbjct: 457 NLTTFGHYVSVVKQGSGDWLLCNDTYTSVLAKEDIEKTTPYMLFYKRREFRPLPTD 512
>gi|410988611|ref|XP_004000577.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like [Felis
catus]
Length = 752
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 165/363 (45%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 393 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRC-----------EMPSPELCLVCEMS 441
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 442 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 494
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 495 -KG---DDAGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 550
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 551 CTSFWPMSPGRESSVNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 610
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 611 LTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTN 670
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 671 SGNDENKYSLFAVVNHQG-TLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 729
Query: 348 LFF 350
LF+
Sbjct: 730 LFY 732
>gi|157818203|ref|NP_001101722.1| ubiquitin carboxyl-terminal hydrolase 51 [Rattus norvegicus]
gi|149031357|gb|EDL86355.1| rCG38961 [Rattus norvegicus]
Length = 696
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 167/356 (46%), Gaps = 53/356 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT P L F L +H + +T S C C +
Sbjct: 361 GLINLGNTCFMNCIVQALTRIPLLKEFFLSDKHKCM---MTSPSL--------CLVCEMS 409
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I AEH RQ+DAHEFL ++D H +
Sbjct: 410 SLFQAMYSGNQSPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH-------RHS 462
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
R G G +N + ++ IF G LQS V C C S +D DISLD+ S
Sbjct: 463 RDDGIEQEGN-----LNHCNCIIDYIFTGGLQSDVTCQVCHGVSTTIDPCWDISLDLPVS 517
Query: 208 ---------------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNI 252
SL + ++ F +PE L + K KC C+ + KQ+++ + P +
Sbjct: 518 YTPGRAGSTGQKPRVISLTDCLKWFTRPEDLGSSAKIKCSRCQSYQQSTKQLTMKKLPIV 577
Query: 253 LVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQDP---QP---------EYKLF 298
LKRFE G KI+ I+F L ++ F+ + QP +Y LF
Sbjct: 578 ACFHLKRFEHLGKQRRKINTFISFPLELDMTPFLASTKESIMKGQPLTECVPIENKYSLF 637
Query: 299 GTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRAN 354
I H G + +SGHY ++++ +W+ C+D+ V+ +T++E+L + Y+LF+ R +
Sbjct: 638 AVINHHG-TLESGHYTSFVRQEKDQWFSCDDAVVTKATMEELLYSEGYLLFYHRQD 692
>gi|449666470|ref|XP_002164031.2| PREDICTED: uncharacterized protein LOC100201504 [Hydra
magnipapillata]
Length = 995
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 162/340 (47%), Gaps = 28/340 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFC---LKLQHSSLCKQLTGDSALDAERKRECPFC 84
GL+NLGN+CY+NSV+QCL T PL + + +H +LC +A E RE F
Sbjct: 656 GLKNLGNTCYMNSVIQCLACTLPLGKYFTTGMYEKHLNLC----NTNAHPGELARELAFL 711
Query: 85 ILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC---- 140
I+ SV +P + L FA F +Q+DAHE L + +D H
Sbjct: 712 IIVISAGEYRSV-----SPIDFKIALGKFAPDFSGFKQQDAHELLMFFMDGLHEDVNKIV 766
Query: 141 ----LRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDE 196
+++K+ + + SV+ ++F G +S V CL+C S D
Sbjct: 767 KKEIIKVKETDNLSDEIAADIAWKDYKLNNDSVIVDLFQGQFRSTVTCLSCNKRSKTFDA 826
Query: 197 I--MDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
+ + L S +L+ +Q F + E + GN+ +KC NCK+ A K + I + P +L+
Sbjct: 827 FNCLQLPLPSNQSTTLENCIQTFTKAEKIGGNDSWKCSNCKRYREASKTIEIWKLPPVLI 886
Query: 255 IQLKR--FEGIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
IQLKR F+G + KI + F + +S ++ A Q +Y L+ I H G S +SG
Sbjct: 887 IQLKRFHFDGRWHNKIQTTVNFPMQNFNMSKYIV-APQSIHTKYHLYAVINHYG-SFESG 944
Query: 312 HYYAY-IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HY A + +WY +DS V + + + Y+LF+
Sbjct: 945 HYTANCVNPYYEKWYNFDDSIVKEIDVNSIKTNTAYLLFY 984
>gi|223005912|ref|NP_001138547.1| ubiquitin carboxyl-terminal hydrolase 27 [Bos taurus]
gi|296470746|tpg|DAA12861.1| TPA: ubiquitin carboxyl-terminal hydrolase 27 [Bos taurus]
Length = 438
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 168/363 (46%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H C+ + + C C +
Sbjct: 79 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR--CEMPSPEL---------CLVCEMS 127
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 128 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 180
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 181 -KG---DDAGKAASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 236
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 237 CTSFWPMSPGRESSVNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 296
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 297 LTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTN 356
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 357 SGNDENKYSLFAVVNHQG-TLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 415
Query: 348 LFF 350
LF+
Sbjct: 416 LFY 418
>gi|115640606|ref|XP_784858.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8
[Strongylocentrotus purpuratus]
Length = 1187
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 169/342 (49%), Gaps = 32/342 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLK---LQHSSLCKQLTGDSALDAERKRECPFC 84
GLRNLGN+C++NSV+QCL+ T PLA + + LQ + L + E F
Sbjct: 851 GLRNLGNTCFMNSVVQCLSNTTPLAKYFITDDYLQDINRANPLGRGGEVAEE------FA 904
Query: 85 ILEKRIVRS-LSVDLTLDAPAKIQSCLRIFAEHFK--CGRQEDAHEFLRYVIDACHNTCL 141
+ +VR+ S AP ++ + + F+ G D+ EFL +++D H
Sbjct: 905 V----VVRANWSGQYRSIAPRDLRDTVTKYVPEFRKHVGHHHDSQEFLLFLLDGLHEDLN 960
Query: 142 RLKK--------LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNK 193
+KK + + G S++ +F G +S V+CL+C +S K
Sbjct: 961 EVKKRQYIKEEDFSKYPDHEAAGLSWRNHEKLNRSIIVSLFQGQFKSTVRCLSCNNKSVK 1020
Query: 194 VDEIMDISLDILNS--CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPN 251
+ M +SL I + CSL E +Q+F +PE L G+N C +CK + K + I + P+
Sbjct: 1021 FEAFMYLSLPIASKSKCSLHECLQQFSKPEELTGDNATHCTHCKGNRKSEKTILIWKLPH 1080
Query: 252 ILVIQLKRF--EGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPD 309
IL+I LKRF EG++ K+ + F L + ++ +Q + Y+L+G HSG + D
Sbjct: 1081 ILLIHLKRFYYEGMWRQKLQTNVDFPNDLTMDRYVIGPAQ--RNIYQLYGVSNHSG-TLD 1137
Query: 310 SGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVYILFF 350
GHY A ++A+ RWY +D V ++ + S YILF+
Sbjct: 1138 GGHYTACCRNAVNKRWYKYDDHEVYDASKSSIKSSAAYILFY 1179
>gi|195621226|gb|ACG32443.1| ubiquitin carboxyl-terminal hydrolase 4 [Zea mays]
Length = 417
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 169/368 (45%), Gaps = 40/368 (10%)
Query: 23 GGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECP 82
G GL N GN+CY NSVLQ L Y P L++ S + L DAE
Sbjct: 63 GERYFGLENFGNTCYCNSVLQALYYCAPFRE--QLLEYYSKNRNLE-----DAEENLLTC 115
Query: 83 FCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR 142
L +I S + AP + +R E+F+ +DAHEFL +++ N +
Sbjct: 116 LADLFSQISASKKKTAVI-APKRFIQMVRKLNEYFRGYMHQDAHEFLNFLL----NEIVD 170
Query: 143 LKKLRRKGGGSSGGGGGGETINGGSSV-----------VKEIFGGALQSQVKCLACGAES 191
+ + S G E ++ G++V V + F G L ++ +CL C +
Sbjct: 171 ILEKESSCAKDSPGTTSSENVSNGAAVDGVRKEPLVTWVHKNFQGILTNETRCLMCETIT 230
Query: 192 NKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPN 251
K + D+S+DI + SL ++ FF E L+ ++K+ CD C L A K+M I ++P
Sbjct: 231 AKDETFFDLSVDIEQNSSLTSCLKNFFSTETLNADDKFFCDKCCSLQEAEKRMKIKKAPQ 290
Query: 252 ILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
ILVI LKRF+ I K +++ V L + S D EY LF +VH G P+ G
Sbjct: 291 ILVIHLKRFKFIEQLNRHKKLSYRVVYPLELKLSSNSADADCEYSLFAVVVHLGSGPNQG 350
Query: 312 HYYAYIKDAIGRWYCCNDSYVSV---STLQEVL---------SEKVYILFFIR----ANQ 355
HY A IK + W +D V + STLQ ++ YILF+ R N+
Sbjct: 351 HYVAMIK-SHDHWLSFDDDNVEMIPESTLQTFYGSSREYSGNTDHGYILFYGRIGGSGNE 409
Query: 356 RPVSANGT 363
+ S++G
Sbjct: 410 KTDSSDGV 417
>gi|431907760|gb|ELK11368.1| Ubiquitin carboxyl-terminal hydrolase 22 A [Pteropus alecto]
Length = 793
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 168/363 (46%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H C+ + + C C +
Sbjct: 434 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR--CEMPSPEL---------CLVCEMS 482
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 483 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 535
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 536 -KG---DDAGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 591
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 592 CTSFWPMSPGRESSVNGESHIPGTTTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 651
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMC--------------KA 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 652 LTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTS 711
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 712 SGNEENKYSLFAVVNHQG-TLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 770
Query: 348 LFF 350
LF+
Sbjct: 771 LFY 773
>gi|391340120|ref|XP_003744393.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
[Metaseiulus occidentalis]
Length = 465
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 166/364 (45%), Gaps = 60/364 (16%)
Query: 20 RKRGGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAE 76
R+R LGLR NLGN+C++N ++QCLT+TP L + L QH +
Sbjct: 119 RQRLADFLGLRGLYNLGNTCFMNCIIQCLTHTPFLREYFLSQQHKCI-----------RS 167
Query: 77 RKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDAC 136
+C C + S + P ++ + A+H Q+DAHEF ++
Sbjct: 168 SPADCLVCEMCSIFQEFYSGKIFPHVPTRLLYLVWTHAQHLAGYEQQDAHEFFMATLNLV 227
Query: 137 HNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDE 196
H + G+ G G + ++ IF G+LQS V C +C S ++
Sbjct: 228 H----------KHASGTDIPYSG-----GCNCIIDVIFTGSLQSDVVCQSCHGVSTTIEP 272
Query: 197 IMDISLDI-------------LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
DISLD+ L+ L + ++ F + E L K KC C + KQ
Sbjct: 273 FWDISLDLGQQTAGDSRKPRSLDRKKLTDCLENFTRAEHLGSAAKIKCSKCNSYQESTKQ 332
Query: 244 MSILQSPNILVIQLKRFEG--IFGGKIDKAIAFEEVLVLSSFMCK-----------ASQD 290
++ + P ++ LKRFE + K+ IAF + L LS +M K S D
Sbjct: 333 LTFKKLPLVVSFHLKRFEHSKLLHKKVSTPIAFPQQLDLSPYMAKPEEQEEADPTSTSHD 392
Query: 291 P---QPE-YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 346
P +P Y LFG ++H G + +GHY AYI+ + W+ C+D + +T++EVL+ + Y
Sbjct: 393 PSFSRPHTYSLFGVVIHQG-TLQTGHYTAYIRQSPNGWFKCDDCEIKTATIEEVLNCEAY 451
Query: 347 ILFF 350
+LF+
Sbjct: 452 LLFY 455
>gi|432863250|ref|XP_004070044.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Oryzias
latipes]
Length = 508
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 171/384 (44%), Gaps = 67/384 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLT-----------GDSALDAE 76
GLRNLGN+C++N++LQ L+ + + +L +L T GD+++
Sbjct: 85 GLRNLGNTCFMNAILQSLSNIEQFSCYFKELPAVALRSGKTAGRRMYHTRSQGDNSVSLV 144
Query: 77 RKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDAC 136
+ C L + + S D A KI R + +Q+DAHEF+RY++D
Sbjct: 145 EEFRKTLCSLWQGNQTAFSPDSLFYAIWKIMPSFRGY-------QQQDAHEFMRYLLDHL 197
Query: 137 HNTCLRLKKLRRKG---------GGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLAC 187
H R + R G G G NG SVV IFGG LQ++V CL C
Sbjct: 198 H----RELQYSRNGASHPVSPQDGVRLSSAEGKCCTNGAPSVVTSIFGGLLQNEVNCLIC 253
Query: 188 GAESNKVDEIMDISLDILN--------------SCSLKEAMQKFFQPEVLDGNNKYKCDN 233
G ES K D +D+SLDI + +C+L++ + F E LD Y C
Sbjct: 254 GTESRKFDPFLDLSLDIPSQFRQKRSKDQEPSPTCTLRDCLYSFTDLEELDETELYYCHK 313
Query: 234 CKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQD 290
CKK + K+ I P +L + LKRF KID + F + L + ++
Sbjct: 314 CKKRQKSTKKFWIHNLPKVLCLHLKRFHWTAFLRNKIDTYVEFPLKGLDMRGYLL----- 368
Query: 291 PQPE--------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS 342
+PE Y L +VH G SGHY AY WY NDS V+++ V
Sbjct: 369 -EPENSLPGSCLYDLVAVVVHHGSGVGSGHYTAYGSHE-ACWYHFNDSTVTLTNEDTVRK 426
Query: 343 EKVYILFFI-RANQRP---VSANG 362
K YILF++ R + P V+A+G
Sbjct: 427 AKAYILFYVERTAEVPSDKVAADG 450
>gi|441675766|ref|XP_003276933.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27 [Nomascus
leucogenys]
Length = 788
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 165/363 (45%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 429 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR-----------CEMPSPELCLVCEMS 477
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 478 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 530
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 531 -KGDDV---GKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 586
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 587 CTSFWPMSPGRESSVNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 646
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 647 LTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTN 706
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 707 SGNNENKYSLFAVVNHQG-TLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 765
Query: 348 LFF 350
LF+
Sbjct: 766 LFY 768
>gi|440912738|gb|ELR62279.1| Ubiquitin carboxyl-terminal hydrolase 22-A, partial [Bos grunniens
mutus]
Length = 541
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 181/407 (44%), Gaps = 80/407 (19%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 169 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRC-----------EMPSPELCLVCEMS 217
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 218 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 270
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 271 -KG---DDAGKAASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 326
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 327 CTSFWPMSPGRESSVNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 386
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 387 LTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTN 446
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 447 SGNDENKYSLFAVVNHQG-TLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 505
Query: 348 LFFIRANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKAVATK 394
LF+ + V HE+ E K K TVP+ +A++
Sbjct: 506 LFYHKQ---------------VLEHES--EKVKEWKMTVPILQLASR 535
>gi|402910176|ref|XP_003917765.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27 [Papio anubis]
Length = 726
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 168/363 (46%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H C+ + + C C +
Sbjct: 367 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR--CEMPSPEL---------CLVCEMS 415
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 416 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 468
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 469 -KGDDV---GKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 524
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 525 CTSFWPMSPGRESSVNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 584
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 585 LTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTN 644
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 645 SGNNENKYSLFAVVNHQG-TLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 703
Query: 348 LFF 350
LF+
Sbjct: 704 LFY 706
>gi|348553656|ref|XP_003462642.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Cavia
porcellus]
Length = 806
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 168/363 (46%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H C+ + + C C +
Sbjct: 447 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR--CEMPSPEL---------CLVCEMS 495
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 496 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 548
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 549 -KGDDV---GKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 604
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 605 CTSFWPMSPGRETSVNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 664
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 665 LTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTN 724
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 725 SGNNENKYSLFAVVNHQG-TLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 783
Query: 348 LFF 350
LF+
Sbjct: 784 LFY 786
>gi|429327458|gb|AFZ79218.1| Ubiquitin carboxyl-terminal hydrolase family member protein
[Babesia equi]
Length = 668
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 186/394 (47%), Gaps = 30/394 (7%)
Query: 28 GLRNLG-NSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GL N G N CY+N ++Q +++TP L++ ++ H+++C T ++ C C+L
Sbjct: 84 GLNNPGINICYMNVIIQVISHTPFLSSALIRSGHTNVCPNYT--------KRILCVMCLL 135
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR---- 142
E + S S L+ P ++ FK G+Q+DA FL++ +++ +C
Sbjct: 136 ENHVKASTSSRKPLNNPF-YPIAQKVIWLKFKFGQQDDAFIFLKHFLNSLIKSCYSITAS 194
Query: 143 --LKKLRRKGGGSSGGGGGGETIN------GGSSVVKEIFGGALQSQVKCLACGAESNKV 194
+ R + ET + SS + +FGG ++ + C C +S KV
Sbjct: 195 PVMDNNRTRMAMDKEANSEKETRDILSTEKIMSSAIGHLFGGFFKNVIVCEKCKLKSEKV 254
Query: 195 DEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
+ DI + + S L + + F PE L +NKY C CK +A K +SI +SP IL
Sbjct: 255 EPFFDIPVHVNKSNKLIDLLSTFLLPEKLICDNKYFCKICKSHQNADKSLSIYKSPRILN 314
Query: 255 IQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGH 312
I LKRF G K KAI F + L L S + ++ + +Y+L+ + H G S GH
Sbjct: 315 INLKRFNVSSHGLEKSTKAIEFPQSLSL-SLKHEVDREIRLKYQLYAIVCHIGKSLRMGH 373
Query: 313 YYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK--VYILFFIRANQRPVSAN---GTFASN 367
Y YIK G WYC +DS V + +V S+K VY+LF+ N+ ++ + F+
Sbjct: 374 YITYIKGHHGFWYCFDDSNVRCVSESKVFSQKNDVYLLFYSIVNEDVLNCDTKLNKFSQT 433
Query: 368 GVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSS 401
S +G++ + V V K E+ S
Sbjct: 434 NTFSTASGEKEHMATPEHVKQDHVVKKGKREKPS 467
>gi|443688793|gb|ELT91385.1| hypothetical protein CAPTEDRAFT_151271 [Capitella teleta]
Length = 412
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 166/344 (48%), Gaps = 31/344 (9%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGD---SALDAERKRECPF 83
+GLRNLGN+C++NSV+QCL+ T L ++C + +H + T + + ++A F
Sbjct: 71 VGLRNLGNTCFMNSVIQCLSNTRLLRDYCRRDEHKDEVNKTTSNMKGALINA-------F 123
Query: 84 CILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
L I + T +P +S + FA+ F Q+DA EFL Y+++ H R+
Sbjct: 124 ANLMHSIWKG--APDTHVSPNDFKSQIARFAKRFVGYNQQDAQEFLMYLLEGLHEDVNRV 181
Query: 144 KKLRRK-------GGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDE 196
K+ R+ S ++ S + +IF G L+S + C CG S+ D
Sbjct: 182 KEKRKNRIYDEDDSKTVSAQEMWKMYLHQNDSKIVDIFVGQLKSSLTCTGCGHVSDTFDP 241
Query: 197 IMDISLDIL------NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSP 250
D+SL I N SL+ + F EVLDG+ K C CKK K SI + P
Sbjct: 242 FWDLSLPIKKGHGYGNDVSLESCFELFTSEEVLDGDEKPMCSKCKKRQKCTKSFSIQRFP 301
Query: 251 NILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFS 307
+L+I LKRF + + K+ + F + L L+ F + + P Y LF HSG +
Sbjct: 302 KVLIIHLKRFNQDSSYRSKLSTMVNFPLQSLELNQFAAEKNGAP-AMYNLFAVSNHSG-T 359
Query: 308 PDSGHYYAYIKD-AIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
P GHY AY K W+ +D+ VS + +V S + Y+LF+
Sbjct: 360 PFGGHYTAYTKHPETSTWHHFSDTRVSQISESQVQSSEAYVLFY 403
>gi|392355526|ref|XP_003752062.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like [Rattus
norvegicus]
Length = 912
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 165/363 (45%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 553 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRC-----------EMPSPELCLVCEMS 601
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 602 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 654
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 655 -KGDDV---GKVASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 710
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 711 CTSFWPMSPGRESSLNGESHIPGVTTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 770
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 771 LTMKKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKETRMNGQLQLPTN 830
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 831 SGNNENKYSLFAVVNHQG-TLESGHYTSFIRHHRDQWFKCDDAVITKASIKDVLDSEGYL 889
Query: 348 LFF 350
LF+
Sbjct: 890 LFY 892
>gi|432901665|ref|XP_004076886.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Oryzias
latipes]
Length = 401
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 162/342 (47%), Gaps = 32/342 (9%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCIL 86
+GLRNLGN+C++NS+LQCL+ T L ++CL+ H LD +
Sbjct: 59 VGLRNLGNTCFMNSILQCLSNTSELRDYCLRNVHR-----------LDVNNRTNAALMEE 107
Query: 87 EKRIVRSL--SVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLK 144
++ +SL SV++ +P+ +S ++ A F Q+DA EFLR ++D HN R+
Sbjct: 108 FAKLTQSLWTSVNIEAISPSDFRSEIQRVAPKFVGCNQQDAQEFLRSLLDGLHNEVNRVT 167
Query: 145 KLRRKGGGSSGGGGGGE--------TINGGSSVVKEIFGGALQSQVKCLACGAESNKVDE 196
R E + S V ++F G L+S + C CG S D
Sbjct: 168 VRPRSSVEDFDHYSDEEKSKRMWNLYLAREDSKVVDLFVGQLKSSLTCTVCGFRSTMFDP 227
Query: 197 IMDISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNI 252
D+S+ I +LK+ ++ F + +VLDG K C+ CK K+ SI + P I
Sbjct: 228 FWDLSIPIAQERPGEVTLKDCLRLFTKEDVLDGEEKPTCNKCKARRKCTKRFSIQKFPQI 287
Query: 253 LVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPD 309
LVI LKRF K+ + F + L L F A P Y L+ H+G +
Sbjct: 288 LVIHLKRFSDSNSRSSKLSTFVNFPLKELDLREF--SADNSEHPVYNLYAVSNHTG-NTL 344
Query: 310 SGHYYAYIKD-AIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
GHY AY ++ A+G WY NDS VS + +V + Y+LF+
Sbjct: 345 GGHYTAYCRNPALGEWYSYNDSRVSPISSGQVRTSNAYVLFY 386
>gi|311276366|ref|XP_003135158.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51-like [Sus
scrofa]
Length = 710
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 166/363 (45%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+ P L +F L +H + +T S C C +
Sbjct: 363 GLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCI---MTSPSL--------CLVCEMS 411
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + T P K+ + I AEH RQ+DAHEFL ++D H
Sbjct: 412 SLFHAMYSGNRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLH---------- 461
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
+ G N + ++ IF G LQS V C C S +D DISLD+ S
Sbjct: 462 -RHSKEDSVGQEASNPNCCNCIIDHIFTGGLQSDVTCQVCHTVSTTIDPCWDISLDLPGS 520
Query: 208 C-------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
C SL + +Q F + E L + K KC +C+ + K
Sbjct: 521 CATFSCQNPERADGTVSRDERIPGNPSLTDCLQWFTRREHLGSSAKIKCSSCQSYQESTK 580
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQ----DPQPE-- 294
Q+++ + P + +KRFE G KI+ I+F L ++ F+ + + QP+
Sbjct: 581 QLTMKKLPIVACFHIKRFEHVGKQRRKINTFISFPLELDMTPFLSSTKESKMKERQPQTD 640
Query: 295 -------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
Y LF I H G + +SGHY ++I+ +W+ C+D+ ++ +T++++L + Y+
Sbjct: 641 YAPIENKYSLFAVINHHG-TLESGHYTSFIRQQKDQWFSCDDAVITKATIEDLLYSEGYL 699
Query: 348 LFF 350
LF+
Sbjct: 700 LFY 702
>gi|212722906|ref|NP_001132802.1| uncharacterized protein LOC100194291 [Zea mays]
gi|194695428|gb|ACF81798.1| unknown [Zea mays]
gi|413937406|gb|AFW71957.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 417
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 168/368 (45%), Gaps = 40/368 (10%)
Query: 23 GGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECP 82
G GL N GN+CY NSVLQ L Y P L+ + + L DAE
Sbjct: 63 GERYFGLENFGNTCYCNSVLQALYYCAPFREQLLEYYRRN--RNLE-----DAEENLLTC 115
Query: 83 FCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR 142
L +I S + AP + +R E+F+ +DAHEFL +++ N +
Sbjct: 116 LADLFSQISASKKKTGVI-APKRFIQMVRKLNEYFRGYMHQDAHEFLNFLL----NEIVD 170
Query: 143 LKKLRRKGGGSSGGGGGGETINGGSSV-----------VKEIFGGALQSQVKCLACGAES 191
+ + S G E ++ G++V V + F G L ++ +CL C +
Sbjct: 171 ILEKESSSAKDSPGTTSSENVSNGAAVDGVRKEPLVTWVHKNFQGILTNETRCLMCETIT 230
Query: 192 NKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPN 251
K + D+S+DI + SL ++ FF E L+ ++K+ CD C L A K+M I ++P
Sbjct: 231 AKDETFFDLSVDIEQNSSLTSCLKNFFSTETLNADDKFFCDKCCSLQEAEKRMKIKKAPQ 290
Query: 252 ILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
ILVI LKRF+ I K +++ V L + S D EY LF +VH G P+ G
Sbjct: 291 ILVIHLKRFKFIEQLNRHKKLSYRVVYPLELKLSSNSADADCEYSLFAVVVHLGSGPNQG 350
Query: 312 HYYAYIKDAIGRWYCCNDSYVSV---STLQEVL---------SEKVYILFFIR----ANQ 355
HY A IK + W +D V + STLQ ++ YILF+ R N+
Sbjct: 351 HYVAMIK-SHDHWLSFDDDNVEMIPESTLQTFYGSYHEYSGNTDHGYILFYGRIGGSGNE 409
Query: 356 RPVSANGT 363
+ S++G
Sbjct: 410 KTDSSDGV 417
>gi|118395227|ref|XP_001029966.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89284248|gb|EAR82303.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 2334
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 174/409 (42%), Gaps = 79/409 (19%)
Query: 5 HELQM--SWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSS 62
H+L++ SW EK R GP GL N GN+C++NSVLQ +TYTPPLAN+ + +HS+
Sbjct: 1432 HKLKVFNSW------EKLYRVGP--GLTNFGNTCFINSVLQVVTYTPPLANYFTQKKHSA 1483
Query: 63 LC-------KQLTGDSALDAERKRE-------CPFCILEKRIVRSLSVDLTLDAPAKIQS 108
+C KQL S L + C C LE + + + + + P I +
Sbjct: 1484 VCQINSQKRKQLANSSLLSNTPRNTFINSNNFCLMCFLENHMRKCFTATVNIIHPVVIVN 1543
Query: 109 CLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSG------------- 155
+ FK G+QED F ++ ++ + R+ G
Sbjct: 1544 NMHKLINDFKIGKQEDPLTFFTIIVSQIKKEPFQVNENEREEGDKQDLRIQHNEKEKQTE 1603
Query: 156 ---------------------------GGGGGETINGGSSVVKEIFG----GALQSQVKC 184
+ I+ + ++F GA+Q + C
Sbjct: 1604 KIFELDTKKQNEQQDDNDDDSDISQSRKEEEKQYIDALNQKNADLFNNMFTGAIQYNITC 1663
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQ-KFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
+C E + + I LDI SL + + KF + EV+ C C K A +
Sbjct: 1664 YSCKTEQIQYEIYYTIVLDIKGMDSLDDCLSAKFAEKEVV-------CKQC-KYQKAIRT 1715
Query: 244 MSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH 303
+I PN++VI++ RF I KI K I F+ L L + P Y L+ I H
Sbjct: 1716 ANIYNFPNVMVIKINRFYEIM--KIQKNIEFKTELNLQEYSLSKQYSPATNYILYAMITH 1773
Query: 304 SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
G GHYY+YIKD+ W+C NDS V +L E+ ++ Y+LF+I+
Sbjct: 1774 QGSVAWGGHYYSYIKDSSENWFCMNDSSVKQVSLNEMRNDPPYLLFYIK 1822
>gi|392343086|ref|XP_003754792.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like [Rattus
norvegicus]
Length = 837
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 165/363 (45%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 478 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR-----------CEMPSPELCLVCEMS 526
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 527 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 579
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 580 -KGDDV---GKVASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 635
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 636 CTSFWPMSPGRESSLNGESHIPGVTTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 695
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 696 LTMKKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKETRMNGQLQLPTN 755
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 756 SGNNENKYSLFAVVNHQG-TLESGHYTSFIRHHRDQWFKCDDAVITKASIKDVLDSEGYL 814
Query: 348 LFF 350
LF+
Sbjct: 815 LFY 817
>gi|410057456|ref|XP_003317922.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
6-like [Pan troglodytes]
Length = 384
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 116/215 (53%), Gaps = 30/215 (13%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 197 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSPTC-----------HRHKGCMLCTMQ 245
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L + P ++ + A F G+QEDAHEFL + +DA CL
Sbjct: 246 AHITRALHI------PGRVIQPSQALAADFHRGKQEDAHEFLMFTVDAMKKACL------ 293
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 294 -------PGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAA 346
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
S+K+A+++ +PE L+G N Y C C + A K
Sbjct: 347 QSVKQALEQLVKPEELNGENAYHCGLCLQRAPASK 381
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 45/61 (73%)
Query: 295 YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRAN 354
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S++ VLS++ Y+LF+I+ +
Sbjct: 11 YVLYAVLVHAGWSCHNGHYFSYVKALEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKS 70
Query: 355 Q 355
+
Sbjct: 71 E 71
>gi|355727971|gb|AES09371.1| ubiquitin specific peptidase 27, X-linked [Mustela putorius furo]
Length = 514
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 165/363 (45%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 156 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRC-----------EMPSPELCLVCEMS 204
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 205 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 257
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 258 -KG---DDAGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 313
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 314 CTSFWPMSPGRESSVNGESHLPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 373
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 374 LTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTN 433
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 434 SANDENKYSLFAVVNHQG-TLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 492
Query: 348 LFF 350
LF+
Sbjct: 493 LFY 495
>gi|357626409|gb|EHJ76510.1| putative Ubiquitin carboxyl-terminal hydrolase 22 [Danaus
plexippus]
Length = 487
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 160/340 (47%), Gaps = 41/340 (12%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLG++C++N ++Q L +TP L ++ L +H CK L E + L
Sbjct: 159 GLQNLGSTCFMNCIVQTLIHTPLLRDYFLGEKHK--CKTQGSGKCLVCEVSK------LF 210
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR-LKKL 146
+ LTL ++ + A H Q+DAHEF +D H C+ ++
Sbjct: 211 QEFYSGAKTPLTLH---RLLHLIWTHARHLAGYEQQDAHEFFIATLDVLHRHCMNGVEDT 267
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN 206
+K G + ++ +IF G LQS V C +C S +D DISLD+
Sbjct: 268 EKKENGRC------------NCIIDQIFTGGLQSDVVCTSCSGVSTTIDPFWDISLDVAG 315
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIF 264
SL+ +++F + E L K KC NC+ + KQ+++ P + LKRFE
Sbjct: 316 PGSLQACLERFTRAEHLGSAAKIKCSNCRAYRESTKQLTLETLPIVASFHLKRFEHSSQI 375
Query: 265 GGKIDKAIAFEEVLVLSSFMCK-------ASQDPQPE-------YKLFGTIVHSGFSPDS 310
KI ++F L ++ FM A + PE Y LF + H G S D+
Sbjct: 376 DRKISAFVSFPAELDMTPFMSTHRRAVEAADNNNAPEGVFEDNRYSLFAVVNHLG-SLDA 434
Query: 311 GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
GHY AY++ G W+ C+D ++ ++L+EVL + Y+LF+
Sbjct: 435 GHYTAYVRQMKGSWFKCDDHMITRASLREVLDSEGYLLFY 474
>gi|395753974|ref|XP_002831695.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27 [Pongo abelii]
Length = 665
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 165/363 (45%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 306 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRC-----------EMPSPELCLVCEMS 354
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 355 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 407
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 408 -KGDDV---GKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 463
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 464 CTSFWPMSPGRESSVNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 523
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 524 LTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTN 583
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 584 SGNNENKYSLFAVVNHQG-TLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 642
Query: 348 LFF 350
LF+
Sbjct: 643 LFY 645
>gi|223005910|ref|NP_062334.2| ubiquitin carboxyl-terminal hydrolase 27 [Mus musculus]
gi|226753949|sp|Q8CEG8.2|UBP27_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 27; AltName:
Full=Deubiquitinating enzyme 27; AltName: Full=Ubiquitin
thioesterase 27; AltName:
Full=Ubiquitin-specific-processing protease 27; AltName:
Full=X-linked ubiquitin carboxyl-terminal hydrolase 27
Length = 438
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 167/370 (45%), Gaps = 63/370 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 79 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRC-----------EMPSPELCLVCEMS 127
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 128 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 180
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 181 -KGDDV---GKVASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 236
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 237 CTSFWPMSPGRESSLNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 296
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 297 LTMKKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKETRVNGQLQLPTN 356
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 357 SANNENKYSLFAVVNHQG-TLESGHYTSFIRHHRDQWFKCDDAVITKASIKDVLDSEGYL 415
Query: 348 LFFIRANQRP 357
LF+ + P
Sbjct: 416 LFYHKQVLEP 425
>gi|223005906|ref|NP_001138545.1| ubiquitin carboxyl-terminal hydrolase 27 [Homo sapiens]
gi|229558013|sp|A6NNY8.3|UBP27_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 27; AltName:
Full=Deubiquitinating enzyme 27; AltName: Full=Ubiquitin
carboxyl-terminal hydrolase 22-like; AltName:
Full=Ubiquitin thioesterase 27; AltName:
Full=Ubiquitin-specific-processing protease 27; AltName:
Full=X-linked ubiquitin carboxyl-terminal hydrolase 27
gi|119610336|gb|EAW89930.1| hCG1640930 [Homo sapiens]
gi|380785533|gb|AFE64642.1| ubiquitin carboxyl-terminal hydrolase 27 [Macaca mulatta]
gi|410213554|gb|JAA03996.1| ubiquitin specific peptidase 27, X-linked [Pan troglodytes]
gi|410299550|gb|JAA28375.1| ubiquitin specific peptidase 27, X-linked [Pan troglodytes]
Length = 438
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 165/363 (45%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 79 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRC-----------EMPSPELCLVCEMS 127
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 128 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 180
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 181 -KGDDV---GKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 236
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 237 CTSFWPMSPGRESSVNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 296
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 297 LTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTN 356
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 357 SGNNENKYSLFAVVNHQG-TLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 415
Query: 348 LFF 350
LF+
Sbjct: 416 LFY 418
>gi|397567796|gb|EJK45783.1| hypothetical protein THAOC_35581 [Thalassiosira oceanica]
Length = 578
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 173/355 (48%), Gaps = 38/355 (10%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCIL 86
+GL NLGNSCY+NS+LQC+ P+ + L+ + K+L + L + + +
Sbjct: 200 VGLHNLGNSCYMNSILQCINQIKPITGYFLEGDYQ---KELNKANPLGSGGRVATAYGSF 256
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
I + ++ AP ++ + +FA+ F Q D+ EF +Y++D H L ++
Sbjct: 257 LNDI---WGGEYSVVAPRILKQTVSMFAQQFNNNYQHDSQEFCQYLMDGLHED---LNRV 310
Query: 147 RRK-------GGGSSGGGGGGETINGG----SSVVKEIFGGALQSQVKCLACGAESNKVD 195
R K G G E+ S+ + G +S + C ACG ES K D
Sbjct: 311 REKPYVEAVEAFGMEDGKAAVESWRKHLLRHDSIFVDYTQGMHRSHLTCPACGKESIKFD 370
Query: 196 EIMDISLDIL------NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQS 249
ISL I+ +S LK + +F E LD +N + C +CK+ V A K + + +
Sbjct: 371 VYSSISLPIVPAKEGSSSVPLKACLDQFAVGEQLDEHNAWYCPSCKRHVCALKHIQLWNT 430
Query: 250 PNILVIQLKRFE---------GIFGGKIDKAIAFE-EVLVLSSFMCKAS-QDPQPEYKLF 298
P+++V+ +KRF I KI++ + F + L LS ++ +D P Y+LF
Sbjct: 431 PDVIVLHMKRFTFEKCPDEDGKIIRRKIEETVDFPIDRLDLSPYVYGPKYEDAPPVYRLF 490
Query: 299 GTIVHSGFSPDSGHYYAYIKDA-IGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
G H+G + +SGHY A ++++ G WY NDS+V S+ ++ Y+LF+ R
Sbjct: 491 GVSEHTGATANSGHYTATVRNSGDGNWYRYNDSHVGSSSGDAAVTGGAYLLFYQR 545
>gi|444521987|gb|ELV13253.1| Ubiquitin carboxyl-terminal hydrolase 27 [Tupaia chinensis]
Length = 437
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 165/363 (45%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +HS + C C +
Sbjct: 78 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHSC-----------EMPSPELCLVCEMS 126
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 127 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 179
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G L + V C AC S +D DISLD+ S
Sbjct: 180 -KGDDV---GKAANNPNHCNCIIDQIFTGGLHTDVTCQACHGVSTTIDPCWDISLDLPGS 235
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 236 CTSFWPMSPGRESSVNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 295
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMC--------------KA 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 296 LTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTS 355
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 356 SGNDENKYSLFAVVNHQG-TLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 414
Query: 348 LFF 350
LF+
Sbjct: 415 LFY 417
>gi|397468706|ref|XP_003806014.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27 [Pan paniscus]
Length = 642
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 165/363 (45%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 283 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRC-----------EMPSPELCLVCEMS 331
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 332 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 384
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 385 -KGDDV---GKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 440
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 441 CTSFWPMSPGRESSVNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 500
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 501 LTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTN 560
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 561 SGNNENKYSLFAVVNHQG-TLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 619
Query: 348 LFF 350
LF+
Sbjct: 620 LFY 622
>gi|213983223|ref|NP_001135522.1| ubiquitin specific peptidase 2 [Xenopus (Silurana) tropicalis]
gi|195540057|gb|AAI67952.1| Unknown (protein for MGC:147993) [Xenopus (Silurana) tropicalis]
Length = 383
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 172/345 (49%), Gaps = 37/345 (10%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCIL 86
+GLRNLGN+C++NS+LQCL+ T L ++CL+ +S + L+ ++C I+
Sbjct: 46 VGLRNLGNTCFMNSILQCLSNTKDLRDYCLQ---NSYRRDLSS---------KKCNTAIM 93
Query: 87 EKRIVRSLSVDLTLDA-----PAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL 141
E+ R L T A P++ ++ ++ +A F Q+DA EFLR+++D HN
Sbjct: 94 EE-FARLLQAIWTSSANEVVSPSEFKTQIQKYAPRFMGYNQQDAQEFLRFLLDGLHNEVN 152
Query: 142 RL--------KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNK 193
R+ + L G + S + E+F G L+S + C CG S
Sbjct: 153 RVTVKPRPSSQDLDHMPDSEKGKHMWKRYLEREDSRIVELFVGQLKSSLTCTECGYCSTV 212
Query: 194 VDEIMDISLDI----LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQS 249
D D+SL I + SL + M+ F + +VLDG+ K C CK K+ +I +
Sbjct: 213 FDPFWDLSLPIAKKSASEVSLVDCMRLFTKEDVLDGDEKPTCCRCKARRRCTKKFTIQKF 272
Query: 250 PNILVIQLKRF-EG-IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGF 306
P ILV+ LKRF EG I GK+ + F + L L F + +P Y L+ HSG
Sbjct: 273 PKILVLHLKRFSEGRIRSGKLSTFVNFPLKDLDLREF--SSESNPHATYNLYAVSNHSG- 329
Query: 307 SPDSGHYYAYIKD-AIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
+ GHY AY K+ + G WY NDS V+ + +V S Y+LF+
Sbjct: 330 TTMGGHYTAYCKNPSNGEWYTFNDSRVTAMSSNQVRSSDAYVLFY 374
>gi|301764739|ref|XP_002917826.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like
[Ailuropoda melanoleuca]
Length = 596
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 165/363 (45%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 237 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRC-----------EMPSPELCLVCEMS 285
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 286 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 338
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 339 -KG---DDAGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 394
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 395 CTSFWPMSPGRESSVNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 454
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 455 LTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTN 514
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 515 SGNDENKYSLFAVVNHQG-TLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 573
Query: 348 LFF 350
LF+
Sbjct: 574 LFY 576
>gi|281353638|gb|EFB29222.1| hypothetical protein PANDA_006152 [Ailuropoda melanoleuca]
Length = 538
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 165/363 (45%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 191 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRC-----------EMPSPELCLVCEMS 239
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 240 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 292
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 293 -KG---DDAGKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 348
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 349 CTSFWPMSPGRESSVNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 408
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 409 LTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTN 468
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 469 SGNDENKYSLFAVVNHQG-TLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 527
Query: 348 LFF 350
LF+
Sbjct: 528 LFY 530
>gi|145491367|ref|XP_001431683.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398788|emb|CAK64285.1| unnamed protein product [Paramecium tetraurelia]
Length = 451
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 172/348 (49%), Gaps = 29/348 (8%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCIL 86
+GL+NLGN CY+N+ +Q L+ PL+++ ++ ++ + + + F L
Sbjct: 85 VGLKNLGNKCYMNASIQLLSNLQPLSDYFIE---DFQLTEINRKNPISTQGLATVAFANL 141
Query: 87 EKRI----VRSLSVDLT-LDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL 141
K + ++ L+V T + P + + + F Q+DA EFL Y++D H
Sbjct: 142 IKSLWQMDIQKLTVKGTPIIIPEEFNKIIGYCNKSFSDNTQQDAQEFLMYLLDMIHEDLN 201
Query: 142 RLK------KLRRKGGG-------SSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
R+ +LR G G+ + S++ ++ G ++ +KCL+C
Sbjct: 202 RVTFPIKSVQLREYSGDCNQRELEKQAAETWGDYLQRSKSIIVDLMQGQFKNSLKCLSCD 261
Query: 189 AESNKVDEIMDISLDILNS--CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSI 246
+ K + +M +S+ I S C L E ++++ + E L N++ C+NC KLV A K++ +
Sbjct: 262 NYTYKFEPLMYLSVPIPESEECQLIECIKEYVKEEQLTNGNQWFCENCHKLVDAIKKIDL 321
Query: 247 LQSPNILVIQLKRFEGIFGG--KIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVH 303
+ P IL+I LKRF+ I G KI++AI F E L LS + K Q +P Y+L G I H
Sbjct: 322 WKLPTILIIHLKRFKFIENGIKKIEQAINFPMESLNLSQCLPKL-QKEKPIYELLGVICH 380
Query: 304 SGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVYILFF 350
+G S D GHYY Y + WY ND V E+ E Y+L +
Sbjct: 381 TGTS-DRGHYYTYARSKENFNWYLFNDRQVKQVNFTEIPQEDAYLLMY 427
>gi|148701945|gb|EDL33892.1| mCG3962 [Mus musculus]
Length = 568
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 167/370 (45%), Gaps = 63/370 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 209 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRC-----------EMPSPELCLVCEMS 257
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 258 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 310
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 311 -KGDDV---GKVASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 366
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 367 CTSFWPMSPGRESSLNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 426
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 427 LTMKKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKETRVNGQLQLPTN 486
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 487 SANNENKYSLFAVVNHQG-TLESGHYTSFIRHHRDQWFKCDDAVITKASIKDVLDSEGYL 545
Query: 348 LFFIRANQRP 357
LF+ + P
Sbjct: 546 LFYHKQVLEP 555
>gi|407408066|gb|EKF31633.1| ubiquitin hydrolase [Trypanosoma cruzi marinkellei]
Length = 465
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 175/347 (50%), Gaps = 52/347 (14%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P+ LRN GN+CY+N+ +QC+ ++P L SSL A ++R +
Sbjct: 146 PIPLRNFGNTCYMNATIQCILHSPWL--------FSSLVD------ARAWSKRRLATSAL 191
Query: 86 LEKRIVRSLSVDLTLDAPAK----IQSCLRIFAEHFKCGRQEDAHEFLR---YVIDA--- 135
+E R +DAPA+ ++S F F+ Q DAHEFLR +V+ +
Sbjct: 192 MELSAAR-------VDAPAQLLLTVKSEAAKFNAEFQNNGQSDAHEFLRTFLFVVHSEIN 244
Query: 136 ---CHNTCLR-LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAES 191
HNT LK++ + + + +S++ ++FGG ++S+ C +CG S
Sbjct: 245 TSGGHNTPYEELKEVENESEEEAMRRWQEHYLRVDNSIIYDLFGGVMRSRCVCSSCGKVS 304
Query: 192 NKVDEIMDISLDIL----NSCSLKEAMQKFFQP--EVLDGNNKYKCDNCKKLVSARKQMS 245
D +D+SL ++ + +++ ++ F E L G N+ C C++L + + +
Sbjct: 305 LTFDPFLDLSLPMIPGARKAATIESLLKVSFDEAEEKLRGGNQLLCARCRRLRNGTRSVK 364
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
I++ P ILV+ LKRF+ G K + + F E SFM + Q Y+L+G + HSG
Sbjct: 365 IIRWPKILVLHLKRFDDT-GKKNSEPVVFPE-----SFMTHGNSSVQ--YQLYGVVCHSG 416
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS--EKVYILFF 350
S + GHY +Y++ GRWY CND+ +++ST+ E + YILF+
Sbjct: 417 -SENWGHYTSYVRVLSGRWYHCNDAVITLSTVTEAMQALTTAYILFY 462
>gi|426358890|ref|XP_004046722.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
6-like [Gorilla gorilla gorilla]
Length = 293
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 122/228 (53%), Gaps = 30/228 (13%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C R + C C ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC-----------HRHKCCMLCTMQ 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL + +DA CL
Sbjct: 130 AHITRALY------RPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVI 255
S+++A+++ +PE L+G N Y C C + A K +++ S +L++
Sbjct: 231 QSVEQALEQLVKPEELNGENAYHCGLCLQKAPASKTLTLHTSAKVLIL 278
>gi|426258083|ref|XP_004022649.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like, partial
[Ovis aries]
Length = 557
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 165/363 (45%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 198 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRC-----------EMPSPELCLVCEMS 246
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 247 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 299
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 300 -KG---DDAGKAASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 355
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 356 CTSFWPMSPGRESSVNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 415
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 416 LTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTN 475
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 476 SGNDENKYSLFAVVNHQG-TLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 534
Query: 348 LFF 350
LF+
Sbjct: 535 LFY 537
>gi|229597175|gb|AAI37613.1| Usp27x protein [Mus musculus]
Length = 733
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 167/370 (45%), Gaps = 63/370 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 374 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRC-----------EMPSPELCLVCEMS 422
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 423 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 475
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 476 -KGDDV---GKVASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 531
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 532 CTSFWPMSPGRESSLNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 591
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 592 LTMKKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKETRVNGQLQLPTN 651
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 652 SANNENKYSLFAVVNHQG-TLESGHYTSFIRHHRDQWFKCDDAVITKASIKDVLDSEGYL 710
Query: 348 LFFIRANQRP 357
LF+ + P
Sbjct: 711 LFYHKQVLEP 720
>gi|407860773|gb|EKG07488.1| ubiquitin hydrolase, putative,cysteine peptidase, Clan CA, family
C19, putative [Trypanosoma cruzi]
Length = 465
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 175/347 (50%), Gaps = 52/347 (14%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P+ LRN GN+CY+N+++QC+ ++P L F + + K+ SAL
Sbjct: 146 PIPLRNFGNTCYMNAIIQCILHSPWL--FSSLAETHAWSKRPLATSAL------------ 191
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLR----IFAEHFKCGRQEDAHEFLR---YVIDA--- 135
LE R +DAP ++ ++ F F+ Q DAHEFLR +V+ +
Sbjct: 192 LELGAAR-------VDAPGQLLLTVKGEAAKFNAEFQDNGQSDAHEFLRTFLFVVHSEIN 244
Query: 136 ---CHNTCLR-LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAES 191
HNT LK++ + + + +S++ ++FGG ++S+ C +CG S
Sbjct: 245 TSGGHNTPYEELKEVENESEEEAMRRWQEHYLRVDNSIIYDLFGGVMRSRCVCSSCGKVS 304
Query: 192 NKVDEIMDISLDIL----NSCSLKEAMQKFFQP--EVLDGNNKYKCDNCKKLVSARKQMS 245
D +D+SL ++ + +++ ++ F E L G N+ C C++L + + +
Sbjct: 305 LTFDPFLDLSLPMIPGARKAATIESMLKISFDEAEEKLRGGNQLLCARCRRLRNGTRSVK 364
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
I++ P ILV+ LKRF+ G K + + F E SFM + Q Y+L+G + HSG
Sbjct: 365 IIRWPKILVLHLKRFDDT-GKKNSEPVVFPE-----SFMTHGNSPMQ--YQLYGVVCHSG 416
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS--EKVYILFF 350
S + GHY +Y++ GRWY CND+ +S+ST+ E + YILF+
Sbjct: 417 -SENWGHYTSYVRTLSGRWYHCNDAVISLSTVTEAMQALTTAYILFY 462
>gi|410915022|ref|XP_003970986.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Takifugu
rubripes]
Length = 395
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 169/352 (48%), Gaps = 33/352 (9%)
Query: 19 KRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHS-SLCKQLTGDSALDAER 77
K KR +GLRNLGN+C++N++LQCL+ TP L ++CL H L T ++ L E
Sbjct: 42 KNKRPHGLVGLRNLGNTCFMNTILQCLSNTPDLRDYCLTNVHRLDLGDNCTANTTLMEEF 101
Query: 78 KRECPFCILEKRIVRSLSVDLTLDA--PAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDA 135
++++SL + + +A P+ + ++ + F Q+DA EFLR+++D
Sbjct: 102 ----------AKLIQSLCLSGSNEAISPSDVWKQIQQYGPKFVGCNQQDAQEFLRFLLDG 151
Query: 136 CHNTCLRLKKLRRKGGGSSGGGGGGE--------TINGGSSVVKEIFGGALQSQVKCLAC 187
HN R L + G + G E + S V ++F G L+S V C C
Sbjct: 152 LHNDVNRASVLPKVSGHDNDHLGDDEKSKRMWNLYLEREDSKVVDLFVGQLKSSVTCTFC 211
Query: 188 GAESNKVDEIMDISLDI-----LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
G S D D+S+ I +LK+ ++ F + +VLDG+ C CK K
Sbjct: 212 GFTSTVFDPFWDLSIPIPAQKSSEEVTLKDCLRLFTKEDVLDGDESPMCCRCKSRRKCTK 271
Query: 243 QMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFG 299
+ SI + P ILV+ LKRF + K+ + F + L + F + + Y L+
Sbjct: 272 RFSIQRFPQILVLHLKRFSDSSVRTSKLSTYVNFPLKELEMREFATTGGE--RVTYDLYA 329
Query: 300 TIVHSGFSPDSGHYYAYIKD-AIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HSG + GHY AY + ++G WY NDS VS + + S Y+LF+
Sbjct: 330 VSNHSG-NAMGGHYTAYCRHPSLGEWYSYNDSRVSPVSTANIRSSNAYLLFY 380
>gi|395502639|ref|XP_003755686.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Sarcophilus
harrisii]
Length = 711
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 171/368 (46%), Gaps = 52/368 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 351 GLRNLGNTCFMNAILQSLSN---IQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 407
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 408 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 464
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG SS ING S+VV IFGG LQ++V CL CG
Sbjct: 465 -----LELQGGFNGVSRSVILQENSSLSASNKCCINGASTVVTAIFGGILQNEVNCLICG 519
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 520 TESRKFDPFLDLSLDIPSQFRNKRSKNQENGPLCSLRDCLRSFTDLEELDETELYMCHKC 579
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 580 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 638
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ + V+ K YIL
Sbjct: 639 GPESCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEETVVKAKAYIL 697
Query: 349 FFIRANQR 356
F++ R
Sbjct: 698 FYVERQAR 705
>gi|380020720|ref|XP_003694227.1| PREDICTED: uncharacterized protein LOC100870505 [Apis florea]
Length = 1055
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 171/350 (48%), Gaps = 28/350 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRN+GN+C++NSV+QCL+ T PL + L Q+ L T S++ + I E
Sbjct: 717 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQY--LADINTTTSSMKGALIKAFSQVIHE 774
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ + DL ++ A ++S ++ FA F Q+DA EFLRY+++ H R+
Sbjct: 775 ---LWEVGGDLVVNTTA-LKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKP 830
Query: 148 RK---------GGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ + S++ ++F G L+S + C +C S +D
Sbjct: 831 QPIHTDIPEMYTDSQKAVESWKRYLRSEDSMIVDVFVGQLRSSLHCTSCDHVSVTLDPFW 890
Query: 199 DISLDI---LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVI 255
D+SL I + L + ++ F + EVLDG+ K C C+ K SI + P ILVI
Sbjct: 891 DLSLPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVI 950
Query: 256 QLKRFEGI--FGGKIDKAIAFEEV-LVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGH 312
LKRF + F K++ + F L LS+F A + P Y L+G HSG + SGH
Sbjct: 951 HLKRFSPMERFRSKLNVMVDFPLTGLDLSAF--AAPRVPGCTYNLYGVANHSG-TTHSGH 1007
Query: 313 YYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSAN 361
Y AY K W+ NDS VS + V+S + Y+LF+ Q+P S++
Sbjct: 1008 YTAYCKHPYSAEWHEYNDSRVSAVPARSVVSNEAYVLFY---EQQPHSSH 1054
>gi|328784869|ref|XP_392493.4| PREDICTED: hypothetical protein LOC408964 [Apis mellifera]
Length = 987
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 171/350 (48%), Gaps = 28/350 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRN+GN+C++NSV+QCL+ T PL + L Q+ L T S++ + I E
Sbjct: 649 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQY--LADINTTTSSMKGALIKAFSQVIHE 706
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ + DL ++ A ++S ++ FA F Q+DA EFLRY+++ H R+
Sbjct: 707 ---LWEVGGDLVVNTTA-LKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKP 762
Query: 148 RK---------GGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ + S++ ++F G L+S + C +C S +D
Sbjct: 763 QPIHTDIPEMYTDSQKAVESWKRYLRSEDSMIVDVFVGQLRSSLHCTSCDHVSVTLDPFW 822
Query: 199 DISLDI---LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVI 255
D+SL I + L + ++ F + EVLDG+ K C C+ K SI + P ILVI
Sbjct: 823 DLSLPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVI 882
Query: 256 QLKRFEGI--FGGKIDKAIAFEEV-LVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGH 312
LKRF + F K++ + F L LS+F A + P Y L+G HSG + SGH
Sbjct: 883 HLKRFSPMERFRSKLNVMVDFPLTGLDLSAF--AAPRVPGCTYNLYGVANHSG-TTHSGH 939
Query: 313 YYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSAN 361
Y AY K W+ NDS VS + V+S + Y+LF+ Q+P S++
Sbjct: 940 YTAYCKHPYSAEWHEYNDSRVSAVPARSVVSNEAYVLFY---EQQPHSSH 986
>gi|354491289|ref|XP_003507788.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51-like
[Cricetulus griseus]
Length = 709
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 168/360 (46%), Gaps = 57/360 (15%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT P L +F L +H +T S C C +
Sbjct: 370 GLINLGNTCFMNCIVQALTRIPLLKDFFLSDKHKC---TMTSPSL--------CLVCEMS 418
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I AEH RQ+DAHEFL ++D H R +
Sbjct: 419 SLFQAMYSGNQSPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHS-RDDSIE 477
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
++G N + ++ +IF G LQS + C C S +D DISLD+ S
Sbjct: 478 QEGNP-----------NSCNCIIDQIFTGGLQSDLTCQVCHGVSTTIDPCWDISLDLPGS 526
Query: 208 C-------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQ 248
SL + +Q F +PE L + K KC C+ + KQ+++ +
Sbjct: 527 YTSERASGTVSRDGSKAGGPSLTDCLQWFTRPEDLGSSAKIKCSRCQSYQESTKQLTMKK 586
Query: 249 SPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQDP---QP---------E 294
P + LKRFE G KI+ I+F L ++ F+ + QP +
Sbjct: 587 LPIVACFHLKRFEHLGKQRRKINTFISFPLELDMTPFLASTKESIMKGQPLADCVPSENK 646
Query: 295 YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRAN 354
Y LF I H G + +SGHY ++++ +W+ C+D+ V+ +T++E+L + Y+LF+ R +
Sbjct: 647 YSLFAVINHHG-TLESGHYTSFVRQQKDQWFSCDDAIVTKATMEELLYSEGYLLFYHRQD 705
>gi|71657312|ref|XP_817173.1| ubiquitin hydrolase [Trypanosoma cruzi strain CL Brener]
gi|70882348|gb|EAN95322.1| ubiquitin hydrolase, putative [Trypanosoma cruzi]
Length = 465
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 177/348 (50%), Gaps = 54/348 (15%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P+ LRN GN+CY+N+ +QC+ ++P L F + ++ K+ SAL
Sbjct: 146 PIPLRNFGNTCYMNATIQCILHSPWL--FSSLAEANAWSKRRLATSAL------------ 191
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLR----IFAEHFKCGRQEDAHEFLR---YVIDA--- 135
LE R +DAP ++ ++ F F+ Q DAHEFLR +V+ +
Sbjct: 192 LELGAAR-------VDAPGQLLLTVKGEAAKFNAEFQDNGQSDAHEFLRTFLFVVHSEIN 244
Query: 136 ---CHNTCLR-LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAES 191
HNT LK++ + + + +S++ ++FGG ++S+ C +CG S
Sbjct: 245 TSGGHNTPYEELKEVENESEEEAMRRWQEHYLRVDNSIIYDLFGGVMRSRCVCSSCGKVS 304
Query: 192 NKVDEIMDISLDIL----NSCSLKEAMQKFFQP--EVLDGNNKYKCDNCKKLVSARKQMS 245
D +D+SL ++ + +++ ++ F E L G N+ C C++L + + +
Sbjct: 305 LTFDPFLDLSLPMIPGARKAATIESMLKISFDEAEEKLRGGNQLLCARCRRLRNGTRSVK 364
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP-EYKLFGTIVHS 304
I++ P ILV+ LKRF+ G K + + F E SFM + D P +Y+L+G + HS
Sbjct: 365 IIRWPKILVLHLKRFDDT-GKKNSEPVVFPE-----SFM---THDNSPMQYQLYGVVCHS 415
Query: 305 GFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS--EKVYILFF 350
G S + GHY +Y++ GRWY CND+ +S+ST+ E + YILF+
Sbjct: 416 G-SENWGHYTSYVRTLSGRWYHCNDAVISLSTVTEAMQALTTAYILFY 462
>gi|301756861|ref|XP_002914278.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Ailuropoda
melanoleuca]
gi|281347308|gb|EFB22892.1| hypothetical protein PANDA_002153 [Ailuropoda melanoleuca]
Length = 520
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 170/368 (46%), Gaps = 52/368 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 160 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 216
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 217 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 273
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ ING S+VV IFGG LQ++V CL CG
Sbjct: 274 -----LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICG 328
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 329 TESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHRC 388
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 389 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 447
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ V+ K YIL
Sbjct: 448 GPEHCLYDLAAVVVHHGSGVGSGHYTAYAAHE-GRWFHFNDSTVTLTDEDTVVKAKAYIL 506
Query: 349 FFIRANQR 356
F++ R
Sbjct: 507 FYVERQAR 514
>gi|427784441|gb|JAA57672.1| Putative ubiquitin carboxyl-terminal hydrolase [Rhipicephalus
pulchellus]
Length = 881
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 176/400 (44%), Gaps = 106/400 (26%)
Query: 21 KRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLK---LQHSSLCKQLTGDSALDA-- 75
+R +GL N+GN+CY NSVLQ L T L N L+ L ++ K L A A
Sbjct: 436 RREAELVGLLNMGNTCYANSVLQALYMTSRLRNHLLQSDTLPPGTILKSLQELFAFLALS 495
Query: 76 ERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDA 135
+R CP L T P F+ G Q+D EFLRY++D+
Sbjct: 496 QRPAVCPEDFLR-----------TSKPPW------------FQQGEQQDCSEFLRYLVDS 532
Query: 136 CHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVD 195
H ++ ++ G SG G+T+ ++E+FGGA+ + CL C ES +
Sbjct: 533 SH------EEEKQHGFPLSGSHSTGQTL------IQEVFGGAVCTTYHCLTCNGESKNEE 580
Query: 196 EIMDISL----------------------------------DILNSCSLKEAMQKFFQPE 221
I D+ + ++ N +L++ ++ +F+PE
Sbjct: 581 AITDLHVAFPEESRIAGSSESKVYQTRSTTKSTEIKNDSCQEVTNVLALEDMLETYFEPE 640
Query: 222 VLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF--EGIFG--GKIDKAIAFEEV 277
++G N+Y C C L AR+ +++ + P LV+ L RF +G+ G KI +AF +
Sbjct: 641 SMEGENRYHCSVCGTLRDARRTVALAEPPQHLVLTLMRFSYDGVTGTRAKILHEVAFPQT 700
Query: 278 LVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIK------------------- 318
L L S C + QP Y L+ +VHSG S D GHYY Y +
Sbjct: 701 LALPS-NCGLGSNQQPTYVLYAVVVHSGTSADRGHYYTYARYSSQESLSPRKSVYRSGTP 759
Query: 319 DAI-GRWYCCNDSYVSV---STLQEVLS----EKVYILFF 350
D + RWY NDS VS ++LQ + S + Y+LF+
Sbjct: 760 DPLCKRWYLFNDSRVSAASYASLQGLTSRFPRDTAYVLFY 799
>gi|442748253|gb|JAA66286.1| Putative ubiquitin specific peptidase 2 [Ixodes ricinus]
Length = 373
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 163/349 (46%), Gaps = 31/349 (8%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGD---SALDAERKRECP 82
PLGLRNLGN+C++NS++QCL +T PL +CLK ++S +T + +A
Sbjct: 33 PLGLRNLGNTCFMNSIVQCLAHTRPLLEYCLKDCYTSEINNITSSNRGALFEA------- 85
Query: 83 FCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR 142
F L K I RS + + + +P +S ++ FA F Q+D+ EFL Y++ H R
Sbjct: 86 FATLMKSIWRSSNGEYAI-SPQAFRSQIQKFAPRFMGYSQQDSQEFLHYLLQGLHEDINR 144
Query: 143 LKKLRRK---------GGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNK 193
+ R + S + + F +KC CG +S
Sbjct: 145 ITSRPRHVTTEIDDNLSDSQKAAEAWKRYLRFDDSKIVDCFVXXXXXTLKCSVCGHKSVT 204
Query: 194 VDEIMDISLDI---LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSP 250
D D+SL I +S ++++ + F + EVLDG+ K C NC+ K +I + P
Sbjct: 205 FDPFWDLSLPIPKSSDSVTIQQCLSLFTKEEVLDGDEKPTCSNCETRQRCTKSFTIHRCP 264
Query: 251 NILVIQLKRFE--GIFGGKIDKAIAFEEV-LVLSSFMCKASQDPQPEYKLFGTIVHSGFS 307
ILV+ LKRF F K++ + F L L +M S Y L+ HSG S
Sbjct: 265 KILVLHLKRFSPGERFRAKLNTRVEFPLTNLDLCPYM---SNSHYVMYNLYAVSNHSG-S 320
Query: 308 PDSGHYYAY-IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQ 355
SGHY A + G W+ CND+ V+ + V S + Y+LF+ A Q
Sbjct: 321 TYSGHYTATCLHPKSGEWHECNDTKVTEVSSSRVASSEAYVLFYEAATQ 369
>gi|327290078|ref|XP_003229751.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 2-like, partial [Anolis carolinensis]
Length = 666
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 169/342 (49%), Gaps = 31/342 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRNLGN+C++NS+LQCL+ T L ++CL+ Q+ + L +S + E F L
Sbjct: 328 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQY---VRDLNNNSRMQMNLMAE--FAKLI 382
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ + S + +P++ ++ ++ +A F Q+DA EFLR+++D H+ R+ L
Sbjct: 383 QALWTSSPNESV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHSEVNRI--LV 438
Query: 148 RKGGGSS-----------GGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDE 196
R GGSS G + S + ++F G L+S + C CG S D
Sbjct: 439 RPKGGSSDSLDHLPDEEKGRQMWMRYLAREDSRIGDLFVGQLKSSLTCSVCGHCSTAFDP 498
Query: 197 IMDISLDI----LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNI 252
D+SL I +L + ++ F + ++LDG+ K C +CK K+ SI + P I
Sbjct: 499 FWDLSLPIAKKSYGEVNLADCLRLFTKEDILDGDEKPTCCHCKARTKCTKKFSIQRFPKI 558
Query: 253 LVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPD 309
LV+ LKRF I K+ + F + L L F ++ Y L+ HSG +
Sbjct: 559 LVLHLKRFSEARIRSSKLTTFVNFPLKDLDLREFASQSCN--HAVYNLYAVSNHSG-TTM 615
Query: 310 SGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
GHY AY K+ + G W+ NDS V+ + V S Y+LF+
Sbjct: 616 GGHYTAYCKNPVSGEWHAFNDSRVTPLSASHVRSSDAYLLFY 657
>gi|356552474|ref|XP_003544592.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine
max]
Length = 554
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 175/381 (45%), Gaps = 74/381 (19%)
Query: 20 RKRGGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAE 76
R + PLGLR NLG++CY+NSVLQ L + PP ++ L+G L+A
Sbjct: 170 RGKSCYPLGLRGLNNLGSTCYMNSVLQVLLHAPPFRDY-----------FLSGGQRLEAC 218
Query: 77 RKRE------CPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLR 130
R C C + S D + +PA+ + + C Q+DAHEF
Sbjct: 219 HHRRATDLMCCLLCDVNAIFSAVYSGDRSPYSPAQFLYSWWQHSANLACYEQQDAHEFFI 278
Query: 131 YVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAE 190
++DA H ++G +G G G+ + ++F G L+S V C+ACG
Sbjct: 279 SMLDAIHE---------KEGKTRNGSKGNGDC----QCIAHKVFYGLLRSDVTCMACGFT 325
Query: 191 SNKVDEIMDISLDILNSCSLKEAMQK-------------------FFQPEVLDGNNKYKC 231
S D +DISL++ S E +K F +PE L + K C
Sbjct: 326 STTYDPCVDISLNLDTDVSSTEKGKKLTKQNEDGSMSTLSGCLDLFTRPEKLGSDQKLYC 385
Query: 232 DNCKKLVSARKQMSILQSPNILVIQLKRFEGIF----GGKIDKAIAFEEVLVLSSFMCKA 287
NC++ + KQMSI + P +L + +KRFE F KID+ + F L ++ ++ +
Sbjct: 386 QNCRERQDSLKQMSIRKLPLVLSLHVKRFEHSFVKKCSRKIDRYLHFPFSLDMTPYLSSS 445
Query: 288 ----------------SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSY 331
D E+++F + HSG + +SGHY ++++ +WY CND++
Sbjct: 446 ILRARYGNRNFTFGGDQSDMFSEFEIFAVVTHSG-TLESGHYVSFVR-VRNQWYRCNDAW 503
Query: 332 VSVSTLQEVLSEKVYILFFIR 352
++V V + + Y++F+++
Sbjct: 504 ITVVDEATVRASQCYMIFYVQ 524
>gi|449472093|ref|XP_002191422.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Taeniopygia
guttata]
Length = 640
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 172/369 (46%), Gaps = 52/369 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 280 GLRNLGNTCFMNAILQSLS---NIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 336
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 337 SLVEEFRKTLCALWQGNQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 393
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG SS ING S+VV IFGG LQ++V CL CG
Sbjct: 394 -----LELQGGFNGVSRSVILQENSSLSASNKCCINGASTVVTAIFGGILQNEVNCLICG 448
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + C+L++ ++ F E LD Y C C
Sbjct: 449 TESRKFDPFLDLSLDIPSQFRNKRTKNQESGPMCTLRDCLRSFTDLEELDETELYMCHKC 508
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 509 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 567
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ + V K YIL
Sbjct: 568 GPESCLYDLVAVVVHHGSGVGSGHYTAYAAHE-GRWFHFNDSTVTLTDEETVGKAKAYIL 626
Query: 349 FFIRANQRP 357
F++ +P
Sbjct: 627 FYVERQAKP 635
>gi|405953224|gb|EKC20928.1| Ubiquitin carboxyl-terminal hydrolase 22 [Crassostrea gigas]
Length = 534
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 181/419 (43%), Gaps = 84/419 (20%)
Query: 1 MGLAHELQMSWQPSLLSEKRKRGGP---------PLGLR---NLGNSCYLNSVLQCLTYT 48
+GL ++W+PS + + R P +GLR NLGN+C++N ++Q L +T
Sbjct: 122 LGLKSYNFIAWEPSEVEVEILRQNPKRRKVENKSTIGLRGLINLGNTCFMNCIVQSLIHT 181
Query: 49 PPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQS 108
P L +F L +H+ Q+T A ++C C + + S + T P ++
Sbjct: 182 PVLRDFFLADKHNC---QMTSVEA------QQCLVCEMARLFQEFYSGNRTPHIPYRLLH 232
Query: 109 CLRIFAEHFKCGRQEDAHEFLRYVIDACH--------NTCLRLKKLRRKGGGSSGGGGGG 160
+ A H Q+DAHEFL +D H N CL + K G + G
Sbjct: 233 LVWTNARHLAGYEQQDAHEFLIAALDVLHRHCKGYSDNKCLSINKFFTGRNGMTSGNP-- 290
Query: 161 ETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI---------------- 204
+ + ++ +IF G LQS V C C S +D I DISLD+
Sbjct: 291 ---HHCNCIIDQIFTGGLQSDVTCQECNNVSTTIDPIWDISLDLGPGAPIPNALLNVNNS 347
Query: 205 --------------LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSP 250
SL + +++F +PE L + K KC C + KQ+++ + P
Sbjct: 348 SSSPSSGFSNSPGTYEPTSLLDCLKRFTKPEHLGSSAKIKCSTCHSYQESTKQLTMKKLP 407
Query: 251 NILVIQLKRFEGIFG--GKIDKAIAFEEVLVLSSFMCKASQDPQ---------------- 292
+ LKRFE G KI ++F E L ++ FM + +
Sbjct: 408 IVACFHLKRFEHSTGLHKKISTFVSFPEELDMTPFMSSSRNNTNGYRNQIVQESAKGLSC 467
Query: 293 -PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
+Y LF + H G + + GHY +I+ +W+ C+D ++ +TL EVL + Y+LF+
Sbjct: 468 DNKYSLFAVVNHMG-TIECGHYTCFIRQHKDQWFKCDDHLITKATLNEVLKSEGYLLFY 525
>gi|403297603|ref|XP_003939647.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27, partial
[Saimiri boliviensis boliviensis]
Length = 550
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 165/363 (45%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 191 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRC-----------EMPSPELCLVCEMS 239
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 240 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 292
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 293 -KGDDV---GKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 348
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 349 CTSFWPMSPGRESSVNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 408
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 409 LTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTN 468
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 469 SGNNENKYSLFAVVNHQG-TLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 527
Query: 348 LFF 350
LF+
Sbjct: 528 LFY 530
>gi|401841065|gb|EJT43615.1| UBP8-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 473
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 175/368 (47%), Gaps = 56/368 (15%)
Query: 14 SLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSAL 73
+++ +R G GL N+G++C+++S+LQCL + P ++ HS+ CK + D
Sbjct: 125 TMVPAMERRDGLS-GLINMGSTCFMSSILQCLIHNPYFIRHSMRQIHSNKCKVRSPD--- 180
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPA-------------KIQSCLRIFAEHFKCG 120
+C C L+K IV L L D P+ + +C +
Sbjct: 181 ------KCFSCALDK-IVHELYGVLNTDQPSSSSSATNRQGGFIHLLTCAWKINQSLAGY 233
Query: 121 RQEDAHEFLRYVIDACHNT-CLRL---KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGG 176
Q+DAHEF +++I+ H + L L K++ R +V +F G
Sbjct: 234 SQQDAHEFWQFLINEIHQSYVLSLPNPKEVDRANNKRC------------DCIVHTVFEG 281
Query: 177 ALQSQVKCLACGAES-NKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCK 235
+L+S + C C S +D MD+SLDI + L E + F + E+L N Y C C
Sbjct: 282 SLESSIVCPGCQNNSKTTIDPFMDLSLDIKDKQKLYECLDSFHKKELLKDFN-YHCGECN 340
Query: 236 KLVSARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQD-- 290
A KQ+ I + P++LV+QLKRFE + G K+D I F L + S+ A +
Sbjct: 341 STQDAIKQLGIHRLPSVLVLQLKRFEHLLNGTNRKLDDFIEFPTYLNMKSYCSTAESESE 400
Query: 291 --------PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS 342
P Y+L G + H G + + GHY A+ K + G+W+ NDS VS + +EVL
Sbjct: 401 NHIGNGKVPDIIYELIGIVSHKG-TVNEGHYIAFCKISGGQWFKFNDSMVSSISQEEVLK 459
Query: 343 EKVYILFF 350
E+ Y+LF+
Sbjct: 460 EQAYLLFY 467
>gi|26326383|dbj|BAC26935.1| unnamed protein product [Mus musculus]
Length = 540
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 167/370 (45%), Gaps = 63/370 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 181 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRC-----------EMPSPELCLVCEMS 229
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 230 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 282
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 283 -KGDDV---GKVASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 338
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 339 CTSFWPMSPGRESSLNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 398
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 399 LTMKKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKETRVNGQLQLPTN 458
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 459 SANNENKYSLFAVVNHQG-TLESGHYTSFIRHHRDQWFKCDDAVITKASIKDVLDSEGYL 517
Query: 348 LFFIRANQRP 357
LF+ + P
Sbjct: 518 LFYHKQVLEP 527
>gi|426395913|ref|XP_004064203.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27, partial
[Gorilla gorilla gorilla]
Length = 549
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 165/363 (45%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 190 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRC-----------EMPSPELCLVCEMS 238
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 239 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 291
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 292 -KGDDV---GKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 347
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 348 CTSFWPMSPGRESSVNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 407
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 408 LTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTN 467
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 468 SGNNENKYSLFAVVNHQG-TLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 526
Query: 348 LFF 350
LF+
Sbjct: 527 LFY 529
>gi|351706550|gb|EHB09469.1| Ubiquitin carboxyl-terminal hydrolase 27 [Heterocephalus glaber]
Length = 438
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 164/363 (45%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 79 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRC-----------EMPSPELCLVCEMS 127
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 128 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 180
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 181 -KGDDV---GKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 236
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 237 CTSFWPMSPGRETSVNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 296
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMC--------------KA 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 297 LTMNKLPVVACFHFKRFEHSVKQRRKITTYISFPLELDMTPFMASSKESRMNGQLQLPTS 356
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I +W+ C+D+ ++ +++++VL + Y+
Sbjct: 357 SGNNENKYSLFAVVNHQG-TLESGHYTSFICHHKDQWFKCDDAVITKASIKDVLDSEGYL 415
Query: 348 LFF 350
LF+
Sbjct: 416 LFY 418
>gi|71416106|ref|XP_810096.1| ubiquitin hydrolase [Trypanosoma cruzi strain CL Brener]
gi|70874578|gb|EAN88245.1| ubiquitin hydrolase, putative [Trypanosoma cruzi]
Length = 465
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 174/347 (50%), Gaps = 52/347 (14%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P+ LRN GN+CY+N+ +QC+ ++P L SSL + A ++R +
Sbjct: 146 PIPLRNFGNTCYMNATIQCILHSPWL--------FSSLAE------AHAWSKRRLATSAL 191
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLR----IFAEHFKCGRQEDAHEFLR---YVIDA--- 135
LE R +DAP ++ ++ F F+ Q DAHEFLR +V+ +
Sbjct: 192 LELGAAR-------VDAPGQLLLTVKGEAAKFNAEFQDNGQSDAHEFLRTFLFVVHSEIN 244
Query: 136 ---CHNTCLR-LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAES 191
HNT LK++ + + + +S++ ++FGG ++S C +CG S
Sbjct: 245 TSGGHNTPYEELKEVENESEEEAMRRWQEHYLRVDNSIIYDLFGGVMRSSCVCSSCGKVS 304
Query: 192 NKVDEIMDISLDIL----NSCSLKEAMQKFFQP--EVLDGNNKYKCDNCKKLVSARKQMS 245
D +D+SL ++ + +++ ++ F E L G N+ C C++L + + +
Sbjct: 305 LTFDPFLDLSLPMIPGARKAATIESMLKISFDEAEEKLRGGNQLLCARCRRLRNGTRSVK 364
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
I++ P ILV+ LKRF+ G K + + F E SFM + Q Y+L+G + HSG
Sbjct: 365 IIRWPKILVLHLKRFDDT-GKKNSEPVVFPE-----SFMTHGNSPMQ--YQLYGVVCHSG 416
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS--EKVYILFF 350
S + GHY +Y++ GRWY CND+ +S+ST+ E + YILF+
Sbjct: 417 -SENWGHYTSYVRTFSGRWYYCNDAVISLSTVTEAMQALTTAYILFY 462
>gi|125817446|ref|XP_001337596.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Danio
rerio]
gi|125817457|ref|XP_692507.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Danio
rerio]
Length = 398
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 164/340 (48%), Gaps = 27/340 (7%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQH-SSLCKQLTGDSALDAERKRECPFCI 85
+GLRNLGN+C++NS+LQCL+ T L ++CL+ H + L +AL E F
Sbjct: 62 VGLRNLGNTCFMNSILQCLSNTHDLRDYCLRNTHRTDLNNNCRAKAALMDE------FAK 115
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR--- 142
L + I S S + +P+ + ++ +A F Q+DA EFLR+++D HN R
Sbjct: 116 LTQTIWTSASNEAI--SPSDFKMQIQKYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTV 173
Query: 143 -----LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEI 197
++ L G + + S V ++F G L+S + C CG S D
Sbjct: 174 KSRAPVEDLDHLSEDEKGKRMWNKYLESEDSKVVDLFVGQLKSSLTCSECGFCSTVFDPF 233
Query: 198 MDISLDILNS---CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
D+SL I + SL + ++ F + +VLDGN + C CK K+ +I + P ILV
Sbjct: 234 WDLSLPIAKTSGEVSLNDCLRLFTKEDVLDGNERPTCHRCKTRRKCTKKFTIQKFPKILV 293
Query: 255 IQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
+ LKRF + K+ + F + L L F S + Y L+ H+G S G
Sbjct: 294 LHLKRFSECRVRTSKLSTFVNFPLKELDLREFASDNSVNAV--YNLYAVSNHTGTSL-GG 350
Query: 312 HYYAYIKD-AIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HY AY + G WY NDS VS + +V S Y+LF+
Sbjct: 351 HYTAYCRSPCTGEWYTYNDSRVSPMSSSQVCSSDAYVLFY 390
>gi|195128351|ref|XP_002008627.1| GI11709 [Drosophila mojavensis]
gi|193920236|gb|EDW19103.1| GI11709 [Drosophila mojavensis]
Length = 710
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 174/375 (46%), Gaps = 46/375 (12%)
Query: 9 MSWQPS------LLSEKRKRGGPP---LGLR---NLGNSCYLNSVLQCLTYTPPLANFCL 56
+ W P+ LL+ R+R P +GLR NLG +C++N ++Q L +TP L+++ +
Sbjct: 341 IPWIPTPKETNLLLANARRRLVRPNQTIGLRGLLNLGATCFMNCIVQALVHTPLLSDYFM 400
Query: 57 KLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEH 116
+H G S+ +C C + + S T + ++ + A+H
Sbjct: 401 SDRHDC------GKSS------HKCLVCEVSRLFQEFYSGSRTPLSLHRLLHLIWNHAKH 448
Query: 117 FKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSS-------- 168
Q+DAHEF +D H C++ K SS GG + + ++
Sbjct: 449 LAGYEQQDAHEFFIATLDVLHRHCVKAKSEHESKSNSSSATGGNSSSSANATATHSYGQC 508
Query: 169 --VVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCS--------LKEAMQKFF 218
++ +IF G LQS V C AC S D DISLD+ + S L + ++++
Sbjct: 509 NCIIDQIFTGMLQSDVVCQACKGVSTTFDPFWDISLDLGETTSHGGVTPKTLIDCLERYT 568
Query: 219 QPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEE 276
+ E L K KC CK + KQ S+ P+++ LKRFE + KI I F
Sbjct: 569 RAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEHSALIDRKISSFIQFPV 628
Query: 277 VLVLSSFMC-KASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVS 335
++ FM K + + L+ + H G + D+GHY AY++ W C+D ++++
Sbjct: 629 EFDMTPFMSEKNNAYGDFRFSLYAVVNHVG-TIDTGHYTAYVRHQKDTWVKCDDHVITMA 687
Query: 336 TLQEVLSEKVYILFF 350
+L++VL + Y+LF+
Sbjct: 688 SLKQVLDSEGYLLFY 702
>gi|293334949|ref|NP_001170649.1| uncharacterized protein LOC100384703 [Zea mays]
gi|238006636|gb|ACR34353.1| unknown [Zea mays]
gi|414591099|tpg|DAA41670.1| TPA: ubiquitin carboxyl-terminal hydrolase [Zea mays]
Length = 552
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 170/367 (46%), Gaps = 38/367 (10%)
Query: 16 LSEKRKRGGP--PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSAL 73
L++K + P P GLRN GN C+LN+ LQ L P + L++ S+ K G L
Sbjct: 189 LNKKTSQNMPLIPQGLRNTGNICFLNATLQALLSCSPFVHLLQDLRNRSIPK--FGYPTL 246
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDA----PAKIQSCLRIFAEHFKCG-----RQED 124
A + F +L++ + + T+ A PA LR F G RQED
Sbjct: 247 RAFVELISQFDVLDESVNKKKEKATTVAAKPLNPAMFDDVLRNFTPDVPAGITARPRQED 306
Query: 125 AHEFLRYVIDACHNTCLRLKK--LRRKGGG--SSGGGGGGETI--NGGSSVVKE------ 172
A EFL + +D H+ L+L L K G SS ET+ S++V+
Sbjct: 307 AQEFLSFAMDRVHDELLKLNGNGLDSKEGMVVSSSADDAWETVGRKNKSAIVRTHSFVPS 366
Query: 173 ----IFGGALQSQVKCLACGAESNKVDEIMDISLDILNSC--SLKEAMQKFFQPEVLDGN 226
IFGG LQS VK A S V + + LDI +L +A++ F PE L+G
Sbjct: 367 ELSAIFGGQLQSVVKA-AGNKASATVQPFLLLHLDIFPDAVQTLNDALRLFSTPESLEG- 424
Query: 227 NKYKCDNCKK-LVSARKQMSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSF 283
Y+ K LV+ARK I P I+++ LKRF G KI K + F LVLS
Sbjct: 425 --YRTTAGKAGLVTARKSFKIHALPKIMILHLKRFSYGNNGSTKIYKPLGFTSELVLSRD 482
Query: 284 MCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE 343
+ + +Y+L TI H G P GHY A+ K A G+W +D V +VL +
Sbjct: 483 LLSSPSQEGRKYELVATITHHGRDPYRGHYTAHAKHADGQWLRFDDDAVVPVGENDVLHD 542
Query: 344 KVYILFF 350
+ Y+LF+
Sbjct: 543 QAYVLFY 549
>gi|324513934|gb|ADY45703.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Ascaris suum]
Length = 494
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 170/378 (44%), Gaps = 56/378 (14%)
Query: 9 MSWQPSLLSEKRKRGGPPL-GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQL 67
+ ++P++++ + L GL NLGN+C++NS++Q + +TP L ++ + QH L
Sbjct: 137 LRYEPTMMTRFTRNTSRGLRGLVNLGNTCFMNSIIQAMVHTPHLKDYFMTDQHRCL---- 192
Query: 68 TGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHE 127
+ +C C L D+T P + + + A H Q+DAHE
Sbjct: 193 -----TPSHPNSQCLMCELSNTFQEFYKGDITPYKPHRFLNLVWTHARHLAGYEQQDAHE 247
Query: 128 FLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLAC 187
F +D H R G SS E + ++ IF G LQS + CL C
Sbjct: 248 FFIAALDVLH----------RHSGSSSLPTTPQEC----NCIIDWIFTGKLQSDLTCLNC 293
Query: 188 GAESNKVDEIMDISLDILNSC-----------SLKEAMQKFFQPEVLDGNNKYKCDNCKK 236
G S VD DISLD+ SL++ +Q++ +PE L K KC C
Sbjct: 294 GGVSTTVDPYWDISLDVGQEALLSPSADGPHISLEDCLQRYIRPEQLGSAAKIKCARCNT 353
Query: 237 LVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSF----------- 283
+ KQ+++ P + LKRFE K+D + F + + ++ F
Sbjct: 354 YEESTKQLTLKTLPMVACFHLKRFEHNSKHRKKMDTKVYFPQFIDMTPFTAAYRERSIGH 413
Query: 284 -------MCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVST 336
+ A + +Y+LF + H G + +SGHY +I+ +W+ C+D +S +
Sbjct: 414 EQKWNSVVADALTKNRNKYELFAVVNHDG-TMESGHYTCFIRHQHNQWFQCDDQIISRAP 472
Query: 337 LQEVLSEKVYILFFIRAN 354
++ VL+ + Y+LF+ +++
Sbjct: 473 VETVLASEGYLLFYHKSH 490
>gi|118359579|ref|XP_001013029.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89294796|gb|EAR92784.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 528
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 181/360 (50%), Gaps = 31/360 (8%)
Query: 16 LSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDA 75
L+E + +G +GL NLGN+C++NS LQCL+ PL ++CL+ + + ++ + + +
Sbjct: 158 LAENKVKGK--VGLINLGNTCFMNSALQCLSNLQPLTDYCLQNKEDN---EINIQNPMGS 212
Query: 76 ERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDA 135
F L ++I + +P + + F + + GRQ+D+ EFL Y++D
Sbjct: 213 GGVVIKAFANLVRQIWNQKEDSV---SPDEFLRVISYFNKIYSSGRQQDSQEFLLYLLDQ 269
Query: 136 CHNTCLRLKK------------LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVK 183
H R++K L +K G+ + SV+ ++F G L++ +K
Sbjct: 270 IHEDLNRVEKKPYVEQKEYFKNLNQKELEKLAADSWGDYLKRNKSVIVDLFQGQLKNTLK 329
Query: 184 CLACGAESNKVDEIMDISLDI----LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVS 239
CL C + + M +++ I N ++++ +++F + E+LDG+ K+ C CK
Sbjct: 330 CLKCKTAKYQFEPFMYLTVPIPQKAENEINIQDCIEQFTEKEILDGDEKWFCPECKDFQK 389
Query: 240 ARKQMSILQSPNILVIQLKRFEGIFGG--KIDKAIAFE-EVLVLSSFMCKASQDPQPEYK 296
+ K++ + + P IL+I +KRF+ KI + F + +S F+ K Q +P Y
Sbjct: 390 SEKKIDLWKLPPILMICMKRFQYTAQSKKKITTKVQFPVQHFDMSEFIPKTLQKEKPIYD 449
Query: 297 LFGTIVHSGFSPDSGHYYAYIKDAIGR-WYCCNDSYVSV--STLQEVLSEKVYILFFIRA 353
LF I H G+ + GHY AY K+ + WY NDS S+ + + ++ Y+LF+ ++
Sbjct: 450 LFSVISHKGYL-NFGHYVAYCKNQEDKQWYLFNDSKTSLIQDPEENIPKKEAYVLFYQKS 508
>gi|7673618|gb|AAF66953.1|AF229643_1 ubiquitin specific protease [Mus musculus]
Length = 525
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 167/370 (45%), Gaps = 63/370 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 166 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRC-----------EMPSPELCLVCEMS 214
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 215 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 267
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 268 -KGDDV---GKVASNHNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 323
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 324 CTSFWPMSPGRESSVDGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 383
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 384 LTMKKLPVVACFHFKRFEHSAKQRRKIATYISFPLELDMTPFMASSKETRVNGQLQLPTN 443
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 444 SANNENKYSLFAVVNHQG-TLESGHYTSFIRHHRDQWFKCDDAVITKASIKDVLDSEGYL 502
Query: 348 LFFIRANQRP 357
LF+ + P
Sbjct: 503 LFYHKQVLEP 512
>gi|402877470|ref|XP_003902449.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 331
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 118/189 (62%), Gaps = 1/189 (0%)
Query: 167 SSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGN 226
++++ +IFGG +SQ+KCL C S+ D +DI+LDI + S+K+A+++ +PE L+G
Sbjct: 13 TTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQSVKQALEQVVKPEELNGE 72
Query: 227 NKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCK 286
N Y C C + A K ++ S +L++ LKRF + G K+ K + + E L + +M +
Sbjct: 73 NAYHCGLCLQKAPASKTFTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDIQPYMSQ 132
Query: 287 ASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 346
+ P Y L+ +VH+G+S +GHY +Y+K G+WY +D+ V+ ++ VLS++ Y
Sbjct: 133 QNTGPL-VYVLYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAY 191
Query: 347 ILFFIRANQ 355
+LF+I+ ++
Sbjct: 192 VLFYIQKSE 200
>gi|62320711|dbj|BAD95379.1| putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|227202736|dbj|BAH56841.1| AT2G24640 [Arabidopsis thaliana]
Length = 418
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 129/247 (52%), Gaps = 31/247 (12%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N GNSC+ N VLQCL++T PL + L+ H C+ R C C
Sbjct: 173 PCGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECR-----------RNDWCFLCE 221
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
E + R+ +P I S L + GRQEDAHE +R+ ID + CL
Sbjct: 222 FENHLDRANYSRFPF-SPMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCL---- 276
Query: 146 LRRKGGGSSGGGGGGETI----NGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDIS 201
GGE + +++++ IFGG LQSQV+C AC S++ + +MD++
Sbjct: 277 ----------DEFGGEKVVPPRAQETTLIQYIFGGLLQSQVQCTACSNVSDQYENMMDLT 326
Query: 202 LDIL-NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF 260
++I ++ SL+E + +F E L G+N YKCD C V A K++SI +PNIL I LKRF
Sbjct: 327 VEIHGDAVSLEECLDQFTAKEWLQGDNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRF 386
Query: 261 EGIFGGK 267
+G GK
Sbjct: 387 QGGRFGK 393
>gi|303282773|ref|XP_003060678.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458149|gb|EEH55447.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 376
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 163/354 (46%), Gaps = 53/354 (14%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGD---------SALDAER 77
GL N GN+CY NSVLQ L + P + L+ H+ L K + +++ ++
Sbjct: 23 FGLENFGNTCYANSVLQALYFCQPFRDRVLRY-HAELAKDHEENLLTCLGELFASIAGQK 81
Query: 78 KRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACH 137
KR F AP K + L+ E F+ +DAHEFL YV+
Sbjct: 82 KRTGVF------------------APKKFIARLKKDNELFRSFMHQDAHEFLNYVL---- 119
Query: 138 NTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEI 197
N C+ + + + + G I ++ + +IF G L +Q +CL C +++ +
Sbjct: 120 NECVEILEKEHRAAHPTPAGASAPPI---TTWIHDIFQGQLTNQTRCLWCENVTSRKEAF 176
Query: 198 MDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQL 257
+D+SLD+ + S+ ++ F E LD +K++CD C L A K+M + +P +L + L
Sbjct: 177 LDLSLDVEQNASVTSCLRTFSSNETLDSADKFQCDACGGLQEAHKRMLVKTAPPVLAMHL 236
Query: 258 KRFEGIFG----GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHY 313
KRF+ I K+ + F + L L++ P Y LF +VH G P+ GHY
Sbjct: 237 KRFKYIESLGRHKKLMHRVVFPDELKLNNMEDDLPGTPDAAYGLFAVVVHVGSGPNHGHY 296
Query: 314 YAYIKDAIGRWYCCNDSYVSV---STLQEVL----------SEKVYILFFIRAN 354
+K + G+W +D V + S LQ V +E YILF+ R +
Sbjct: 297 VCLVK-SHGQWLTYDDDDVQLADASALQNVFGSTREHGGSNTEHGYILFYARED 349
>gi|405972649|gb|EKC37407.1| Ubiquitin carboxyl-terminal hydrolase 3 [Crassostrea gigas]
Length = 479
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 116/360 (32%), Positives = 176/360 (48%), Gaps = 51/360 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKL-QHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++N+VLQ L+ + FC + Q SL +++T + RK + P
Sbjct: 121 GLRNLGNTCFMNAVLQSLS---NIQQFCGYIKQLPSLEEKVTKVKKIQT-RKSKTP---- 172
Query: 87 EKRIVRSLSVDLTLDA----------PAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDAC 136
E+ ++ + TL A P + + + F+ +Q+DAHEF+RY++D
Sbjct: 173 EEDVLLVEELRKTLCALWQGSKGAISPESLFAVIWKVVPRFRGYQQQDAHEFMRYLLDRL 232
Query: 137 HNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDE 196
H L L L S G G+ S++V IFGG LQ++V CL CG ES K D
Sbjct: 233 HTELLTL--LPYPNSDSPFIGPKGK-----STIVTAIFGGLLQNEVTCLVCGVESKKHDP 285
Query: 197 IMDISLDILNS---------------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSAR 241
+D+SLDI C+L + +Q F + E L+ + Y C CKK +
Sbjct: 286 FLDLSLDIPQQFCTRGVKAKDGEQLRCTLSDCLQSFTELEELEESELYMCSTCKKKQRST 345
Query: 242 KQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFM------CKASQDPQ 292
K+ I + PN+L + +KRF + F K++ + F E L + ++ + S
Sbjct: 346 KKFWIRRLPNVLCLHIKRFRWQSFFRVKLETFVEFPLEGLNMHKYILDNLHETRGSGSGS 405
Query: 293 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
EY L +VH G SGHY +Y + G+W+ NDS V+ + V K YILF+IR
Sbjct: 406 NEYDLAAVVVHHGSGAGSGHYTSYARHE-GQWFHFNDSTVTPCEPETVAKCKAYILFYIR 464
>gi|402912891|ref|XP_003918971.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 261
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 113/207 (54%), Gaps = 30/207 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS LC R + C C +E
Sbjct: 81 GLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQLC-----------HRHKCCMLCTME 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL +++DA CL
Sbjct: 130 AHITRALHC------PGHVIQPSQALAAGFHRGKQEDAHEFLMFIVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
S+K+A+++ +PE L+G N Y C C
Sbjct: 231 QSVKQALEQVVKPEELNGENAYHCGLC 257
>gi|344249976|gb|EGW06080.1| Ubiquitin carboxyl-terminal hydrolase 27 [Cricetulus griseus]
Length = 438
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 165/363 (45%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 79 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRC-----------EMPSPELCLVCEMS 127
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 128 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 180
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 181 -KGDDV---GKVASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 236
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 237 CTSFWPMSPGRESSMNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCSSCQSYQESTKQ 296
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 297 LTMKKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKETRMNGQLQLPTN 356
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ + +++++VL+ + Y+
Sbjct: 357 SGNNENKYSLFAGVNHQG-TLESGHYTSFIRHHRDQWFKCDDAVIIKASIKDVLNSEGYL 415
Query: 348 LFF 350
LF+
Sbjct: 416 LFY 418
>gi|156388867|ref|XP_001634714.1| predicted protein [Nematostella vectensis]
gi|156221800|gb|EDO42651.1| predicted protein [Nematostella vectensis]
Length = 462
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 155/327 (47%), Gaps = 30/327 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L ++ L QH+ CK GD+ C C +
Sbjct: 160 GLINLGNTCFMNCIVQALTHTPLLRDYFLSDQHN--CK---GDAG-------TCLVCEMG 207
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S +P K+ + A H Q+DAHEF +D HN C
Sbjct: 208 LLFQEFYSGQKVPHSPFKLLHLVWTHARHLAGYEQQDAHEFFIAALDVLHNYC------- 260
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
K N + ++ IF G LQS V C C S VD DISLD+ +
Sbjct: 261 -KEDAPDKLAVKPNNHNQCNCIIDRIFTGGLQSDVICQTCNCVSTTVDPFWDISLDLGHG 319
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE-GIFGG 266
+F +PE L +K KC+ C+ + KQ+S+ + P ++ LKRFE
Sbjct: 320 DHKLVIFCRFTRPESLGSESKIKCNKCQSYQESTKQLSMRKLPIVVCFHLKRFEHSKKSK 379
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI I F + L ++ F+ +Y LF + HSG + + GHY A+I+ W+
Sbjct: 380 KISTYIPFPQELDMAPFL-------SSKYSLFAVVNHSG-TLEVGHYTAFIRQQ-NNWFK 430
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRA 353
C+D++++ +T+ +VL + Y+LF+ R
Sbjct: 431 CDDAWITKATIDDVLQSEGYLLFYHRV 457
>gi|297821749|ref|XP_002878757.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297324596|gb|EFH55016.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 159
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/91 (79%), Positives = 81/91 (89%), Gaps = 1/91 (1%)
Query: 169 VVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNK 228
VVKEIFGGALQSQ+KCL+CGAESN DEIMDISL+IL+S S+KE+MQK FQ E+LDGNNK
Sbjct: 54 VVKEIFGGALQSQIKCLSCGAESNTADEIMDISLEILHSISIKESMQKKFQSEILDGNNK 113
Query: 229 YKCDNCKKLVSARKQM-SILQSPNILVIQLK 258
Y C+ C KLV+ARKQM SILQ PNILVIQLK
Sbjct: 114 YICETCDKLVTARKQMSSILQMPNILVIQLK 144
>gi|403354669|gb|EJY76897.1| hypothetical protein OXYTRI_01583 [Oxytricha trifallax]
Length = 916
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 173/375 (46%), Gaps = 69/375 (18%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCK--------------------QL 67
GL N+GN+C+ NSV+QCLT+TP +C++ HS C Q+
Sbjct: 188 GLGNMGNTCFANSVIQCLTHTPHFLMYCMRNLHSQKCPTRILQTGPLMMLNSIGSHSCQM 247
Query: 68 TGDSALDAE---RKRECPFCILEKRI-------VRSLSVDLTLDAPAKIQSCLRIFAEHF 117
SA+ + ++ C FCILE I R L A I+ ++ F
Sbjct: 248 FMRSAVVQQLLNSEKFCSFCILEAHIKEIFAERERGTKFVYPLSAIVLIK---KVAQGLF 304
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
+ GRQ DA EFL CL L S G +VV +IF G
Sbjct: 305 EVGRQCDASEFL---------LCL----LENMIQASFGYLNNVPFKLQRETVVSKIFQGM 351
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS---------------CSLKEAMQKFFQPEV 222
L+ Q+ C +C + + +D+SL+I N+ + + +FF+ ++
Sbjct: 352 LERQIICCSCSNMTMIEEAFLDLSLNIANTNNDQRMSHTQMSNQPVDFLDCISEFFKTDI 411
Query: 223 LDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVL-S 281
LD NKY C +C +L A+ + + P +L++ +KRF + G K+ + F E S
Sbjct: 412 LDEQNKYHCQSCGRLSKAQTRFRMKNLPKVLIVHMKRFTHL-GTKLKTPLNFPEYFSFDS 470
Query: 282 SFMCK--ASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVS-VSTL 337
++ + A ++ Q +YKL+ IVH G+S GHYY+YI+ WY +D V + L
Sbjct: 471 DYLLEDVAFKEQQHQYKLYALIVHQGYSAHKGHYYSYIRPTNSDNWYKYDDESVKLIENL 530
Query: 338 Q-EVLS-EKVYILFF 350
+ +VLS +K YILF+
Sbjct: 531 ESQVLSTQKAYILFY 545
>gi|401626223|gb|EJS44179.1| ubp8p [Saccharomyces arboricola H-6]
Length = 473
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 171/364 (46%), Gaps = 48/364 (13%)
Query: 14 SLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSAL 73
+++ +R G GL N+G++C+++S+LQCL + P + HS+ CK + D
Sbjct: 125 TMVPAMERRDGLS-GLINMGSTCFMSSILQCLIHNPYFIRHSMNQAHSNKCKVRSPD--- 180
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAP-------------AKIQSCLRIFAEHFKCG 120
+C C L+K IV L L D P + +C ++
Sbjct: 181 ------KCFSCALDK-IVHELYGVLNTDKPFSSSSATNRQTGFIYLLTCAWKINQNLAGY 233
Query: 121 RQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQS 180
Q+DAHEF +++I+ H + + L S + I V +F G+L+S
Sbjct: 234 SQQDAHEFWQFIINQIHQS--YVLSLENPKEAESANDKHCDCI------VHTVFEGSLES 285
Query: 181 QVKCLACGAES-NKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVS 239
+ C C S +D MD+SLDI + L E + F + E+L N Y C C
Sbjct: 286 SIVCPGCQNNSKTTIDPFMDLSLDIKDKKKLYECLDSFHKKELLKDFN-YHCGKCNSTQD 344
Query: 240 ARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQD------ 290
A KQ+ I + P++LV+QLKRFE + G K+D I F L + S+ K +
Sbjct: 345 AIKQLGIHKLPSVLVLQLKRFEHLLNGTNRKLDDFIEFPTYLNMKSYCSKGESESEKHIG 404
Query: 291 ----PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 346
P Y+L G + H G + + GHY A+ K + G+W+ NDS VS + + VL E+ Y
Sbjct: 405 NGKVPDIIYELIGIVSHRG-TVNEGHYIAFCKISGGQWFKFNDSMVSSISQEGVLKEQAY 463
Query: 347 ILFF 350
+LF+
Sbjct: 464 LLFY 467
>gi|440907019|gb|ELR57212.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Bos grunniens
mutus]
Length = 492
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/363 (31%), Positives = 170/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + E
Sbjct: 132 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGENNV 188
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 189 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 245
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ ING S+VV IFGG LQ++V CL CG
Sbjct: 246 -----LELQGGFNGISRSSILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICG 300
Query: 189 AESNKVDEIMDISLDILN--------------SCSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + +CSL++ ++ F E LD Y C C
Sbjct: 301 TESRKFDPFLDLSLDIPSQFRNKRSKNQENGPTCSLRDCLRSFTDLEELDETELYMCHKC 360
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 361 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 419
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ VL K YIL
Sbjct: 420 GPENCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEDTVLKAKAYIL 478
Query: 349 FFI 351
F++
Sbjct: 479 FYV 481
>gi|149028472|gb|EDL83857.1| rCG22861 [Rattus norvegicus]
Length = 489
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 165/363 (45%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 130 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRC-----------EMPSPELCLVCEMS 178
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 179 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 231
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 232 -KGDDV---GKVASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 287
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 288 CTSFWPMSPGRESSLNGESHIPGVTTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQESTKQ 347
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 348 LTMKKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKETRMNGQLQLPTN 407
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 408 SGNNENKYSLFAVVNHQG-TLESGHYTSFIRHHRDQWFKCDDAVITKASIKDVLDSEGYL 466
Query: 348 LFF 350
LF+
Sbjct: 467 LFY 469
>gi|417402329|gb|JAA48015.1| Putative ubiquitin carboxyl-terminal hydrolase 22 [Desmodus
rotundus]
Length = 525
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 172/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+PS LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 147 TWEPSKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 206
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 207 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 255
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 256 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 304
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 305 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGDSHMSGTTTLTD 364
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 365 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 424
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F VL ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 425 YVSFPLVLDMTPFMASSKESRMNGQYQQPADSLSNDNKYSLFAVVNHQG-TLESGHYTSF 483
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 484 IRQHKDQWFKCDDAIITKASIEDVLDSEGYLLFY 517
>gi|320163839|gb|EFW40738.1| ubiquitin carboxyl-terminal hydrolase [Capsaspora owczarzaki ATCC
30864]
Length = 655
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 170/393 (43%), Gaps = 83/393 (21%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLT---GDSALDAERKRE---- 80
GL NLGN+C++N +LQ + P L N+ L QH+ + G +D + +
Sbjct: 287 GLNNLGNTCFMNCILQSFIHNPLLRNYFLADQHTEETCHIQLGKGLPPVDTAKGVQPHNH 346
Query: 81 -------------CPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHE 127
C C +++ + R S + P + + A+H Q+DAHE
Sbjct: 347 HHHHHHQSGSDSLCMACEMDQLLHRFFSGETQPHTPYQFLHSVWKHAKHLAGYEQQDAHE 406
Query: 128 FLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLAC 187
F +DA H C +G T+ ++ +F GALQS + CL C
Sbjct: 407 FFIATLDAMHTHC--------RG-----------TLLNCHCIIHRVFTGALQSDLTCLRC 447
Query: 188 GAESNKVDEIMDISLDI------------LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCK 235
G+ S+ VD DISLD+ L SL++ + +F +PE L + C NCK
Sbjct: 448 GSVSSTVDPFWDISLDLRHHKGATGTPEELQPNSLEQCLHRFIRPERL--TEQISCGNCK 505
Query: 236 KLVSARKQMSILQSPNILVIQLKRFE-GIFGGKIDKAIAFEEVLVLSSFMCKASQ----- 289
KQ++I P ++ LKRFE KID I F L +S ++ + Q
Sbjct: 506 THQDCIKQLTIKSLPVVVCCHLKRFEHATRSFKIDSYIEFPAHLDMSPYLSASLQRQNGN 565
Query: 290 ----DPQPE-----------------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCN 328
P P Y LF + H G S D GHY Y++ RW+ C+
Sbjct: 566 IPVVPPSPREEAPILNASPDFGGNAMYSLFAVVNHRG-SIDHGHYTCYVRHN-SRWFLCD 623
Query: 329 DSYVSVSTLQEVLSEKVYILFFIRANQRPVSAN 361
D++++ ++EV + Y+LF+I+ ++ SAN
Sbjct: 624 DAWITQVDIEEVRESQGYLLFYIK-DEMEYSAN 655
>gi|145345991|ref|XP_001417481.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577708|gb|ABO95774.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 344
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 169/356 (47%), Gaps = 48/356 (13%)
Query: 25 PP----LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
PP GL N GN+CY NSVLQ L ++ H++ D + R +E
Sbjct: 8 PPSAKFFGLENFGNTCYCNSVLQALYACDEFRERLIE-HHAA-----ANDGTSTSGRGKE 61
Query: 81 CPFCILEK-----RIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDA 135
P +L R + + +P LR F+ +DAHEFL ++++
Sbjct: 62 TPDSMLAALGDLFREISGQTKRTGYVSPRAFIERLRKDNVLFRGHMHQDAHEFLNFLLNE 121
Query: 136 CHNTCLRLK-KLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKV 194
C C L+ KL+R G G + + ++F G L +Q +CL C +N+
Sbjct: 122 C---CENLQTKLKRDGAWEPGK----------KTWIHDVFEGKLANQTRCLWCENTTNRE 168
Query: 195 DEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
+ +D+S+D+ + S+ + F E+LD N+K++CD C L A+K+M I ++P +L
Sbjct: 169 ECFLDLSVDVEQNTSITACLNNFSAKELLDKNDKFQCDRCGGLHEAQKRMLIHEAPKVLS 228
Query: 255 IQLKRFEGIFG----GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS 310
+ LKRF+ I K++ + F L + + + +A ++P YKLF +VH G P+
Sbjct: 229 LHLKRFKYIEALGRHAKLNHRVVFPSELKIPNLIDEA-ENPDASYKLFAVVVHIGSGPNH 287
Query: 311 GHYYAYIKDAIGRWYCCNDSYVSV---STLQEVL----------SEKVYILFFIRA 353
GHY + K+ RW+ +D V V LQ+V SE YILF+ R+
Sbjct: 288 GHYVCFAKNN-HRWFLYDDDCVEVVDEEQLQQVFGSTTDGGSAGSEHGYILFYARS 342
>gi|390481017|ref|XP_003736056.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 22-like [Callithrix jacchus]
Length = 697
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 162/364 (44%), Gaps = 64/364 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H C+ + S C C +
Sbjct: 349 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHR--CEMQSPSS---------CLVCEMS 397
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + P K+ + A H Q+DAHEFL +D H C
Sbjct: 398 SLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC------- 450
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C C S +D DISLD+ S
Sbjct: 451 -KG---DDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGS 506
Query: 208 -------------------------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
+L + +++F +PE L + K KC C + K
Sbjct: 507 STPFWPLSPGSEGNVVNGESHMAGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTK 566
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKA------SQDPQP- 293
Q+++ + P + LKRFE KI ++F L ++ FM + Q QP
Sbjct: 567 QLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPT 626
Query: 294 -------EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 346
+Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y
Sbjct: 627 DSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGY 685
Query: 347 ILFF 350
+LF+
Sbjct: 686 LLFY 689
>gi|145551979|ref|XP_001461666.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429501|emb|CAK94293.1| unnamed protein product [Paramecium tetraurelia]
Length = 484
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 169/343 (49%), Gaps = 23/343 (6%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFC-- 84
LGL NLGN+C+LNS +Q L+ T PL ++ + H K++ D+ L ++ F
Sbjct: 49 LGLTNLGNTCFLNSSIQALSNTQPLTDYFMSQLH---VKEINPDNPLSSQGNIVQSFAQL 105
Query: 85 --ILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR 142
+L +++ + ++ P + S + + F G QEDAHEF+ +++D H R
Sbjct: 106 IRLLWQKVDQYTLEEIQALKPTQFISTIGNYNPIFAEGTQEDAHEFIAFLLDMIHEDLNR 165
Query: 143 LKK--------LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKV 194
+KK + + ++ S++ ++F G + + CL C +
Sbjct: 166 IKKKPYVEQTKFTKLPTNDDAHQEWTKYLSRNQSIIVDLFQGHMLDTLSCLTCKSSRYCF 225
Query: 195 DEIMDISLDILN-SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
+ M +S+ +L+ C L E +++F + E L G+ + C C + + K++ + PNIL
Sbjct: 226 EPFMYLSVPVLSRECDLLECIEEFLKTETLTGDEGWNCTKCSQRRDSNKKIDLWSMPNIL 285
Query: 254 VIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS 310
+I LKRF+ F KI + + + L + +C Q +P Y L+ I HSG + S
Sbjct: 286 IIHLKRFKFNSQFRAKIRSLVRYPLQNLSFENLVC-TKQIEKPTYDLYAVINHSG-TLTS 343
Query: 311 GHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
GHY AY K+ +WY NDS VS + E S+ Y+LF+ +
Sbjct: 344 GHYTAYAKNRDDLQWYHYNDSLVSPVSQPENQSD-AYLLFYFK 385
>gi|326429193|gb|EGD74763.1| hypothetical protein PTSG_07000 [Salpingoeca sp. ATCC 50818]
Length = 614
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 160/336 (47%), Gaps = 36/336 (10%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTP----PLANFCLKLQHSSLCKQLTGDSALDAERKRECP 82
LGL N+GN+CY+N+VLQC+ T LA+ K + +L ++ AL E
Sbjct: 86 LGLANVGNTCYINAVLQCINATTIFQRALASLPNKDEEGTLVHKML---ALMGE------ 136
Query: 83 FCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR 142
L + P + L + F GRQED+HE + +
Sbjct: 137 ---LSGSDAEADQAAPAAVNPVHVVQHLLTLSSDFVFGRQEDSHELYQTL---------- 183
Query: 143 LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISL 202
LR + G + ++ V ++FGG + SQ+ C C S + +D+ L
Sbjct: 184 ---LRGLAKDMTPAGHHLPVCDQETTFVHQLFGGTIASQLMCPKCQYTSTSYESCLDLQL 240
Query: 203 DILNSCS--LKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF 260
+I + L+E ++ F PE L +NK+KC++C V A KQ+S+ ++PNIL IQLKRF
Sbjct: 241 EIKEEITDTLEEMLEAFTCPEKLAADNKWKCESCNSHVRALKQLSVYKAPNILCIQLKRF 300
Query: 261 E-GIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP-EYKLFGTIVHSGFS--PDSGHYYAY 316
G+F GK++K IAF L L +FM ++D EY L+ ++H GHY A
Sbjct: 301 RLGVF-GKVNKHIAFPHQLNLKNFMTPGTRDTDGLEYDLYAILIHLDMYNLTSFGHYVAL 359
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
IK + G W +DS V + + Y+LF+ R
Sbjct: 360 IKGSDGVWRLYDDSKVQEVERNVIPNVNPYMLFYKR 395
>gi|212275975|ref|NP_001131019.1| ubiquitin specific protease 51 [Mus musculus]
Length = 661
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 167/361 (46%), Gaps = 58/361 (16%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+ P L F L +H + +T S C C +
Sbjct: 321 GLINLGNTCFMNCIVQVLTHIPLLKEFFLSNKHKCM---MTSPSL--------CLVCEMS 369
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I AEH RQ+DA EFL ++D H + R
Sbjct: 370 LLFQAMYSGNQSPHIPYKLLHLIWIHAEHLAGYRQQDAQEFLIAILDVLH------RHSR 423
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G G N + ++ IF G+LQS + C C S +D DISLD+
Sbjct: 424 DDGIDQEGNS------NCCNCIIDHIFTGSLQSDLTCQVCHGVSTTIDPCWDISLDLPGP 477
Query: 208 --------------------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSIL 247
SL + ++ F +PE L + K KC C+ + KQ+++
Sbjct: 478 YTPGRASSSTSSRDGQKPRVISLTDCLKWFTRPEDLGSSAKIKCSQCQSYQESTKQLTMK 537
Query: 248 QSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQDP---QP--------- 293
+ P + LKRFE G KI+ I+F L ++ F+ + QP
Sbjct: 538 KLPIVACFHLKRFEHLGKQRRKINSFISFPLELDMTPFLASTKESIMKGQPLTECVPSEN 597
Query: 294 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 353
+Y LF I H G + +SGHY ++++ +W+ C+D+ V+ +T++E+L+ + Y+LF+ R
Sbjct: 598 KYSLFAVINHHG-TLESGHYTSFVRQEKDQWFSCDDAVVTKATMEELLNSEGYLLFYHRQ 656
Query: 354 N 354
+
Sbjct: 657 D 657
>gi|389739172|gb|EIM80366.1| hypothetical protein STEHIDRAFT_172638 [Stereum hirsutum FP-91666
SS1]
Length = 1408
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 173/367 (47%), Gaps = 52/367 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLT--GDSALDAERKRECPFCI 85
GLRNLGN+CY+N+ +QCL+ T P A F + + + + G A+ F
Sbjct: 1049 GLRNLGNTCYMNATMQCLSATVPFARFFTEGRWRAAVNMMNKMGTKGAIAQA-----FAH 1103
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHN------- 138
+ I + +++ +P + + +A F Q D+ EFL +++DA H
Sbjct: 1104 ILHEIWQG---EMSFFSPISFRRSICSYASQFAGSEQHDSQEFLSWLLDALHEDLNRVIS 1160
Query: 139 ------TCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESN 192
T R +L + + S+V + F G +++++C+ C S
Sbjct: 1161 KSTYEVTPEREAELEKLPQQIASEQEWRIYRMRNDSIVVDFFQGQFRNRMECMTCHKTST 1220
Query: 193 KVDEIMDISLDILNS----CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQ 248
+ M++SL + S +L+ + F + EV++ ++ + C NCK L A KQ+S+ +
Sbjct: 1221 TYNSFMNLSLPVPTSKHGKITLQNCLDAFVKEEVMEKSDAWNCPNCKVLRKATKQLSLSR 1280
Query: 249 SPNILVIQLKR--FEGIFGGKIDKAIAFE-EVLVLSSFMCKA------------------ 287
P +L+IQ KR F+G F KIDK + F + L L+++M
Sbjct: 1281 LPPVLLIQFKRFSFKGPFTDKIDKHVDFPLKGLELTNYMPPPLPPGVDRGQAAVQYGNDD 1340
Query: 288 --SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKV 345
Q P +Y L+ H G S SGHY A+I ++ G+W C+DS ++ S +EV+ +
Sbjct: 1341 PRQQTPPYKYDLYAVTNHFG-SLSSGHYTAFI-NSRGQWLYCDDSRITPSDAKEVVGKPA 1398
Query: 346 YILFFIR 352
Y+L++ R
Sbjct: 1399 YVLYYKR 1405
>gi|126277020|ref|XP_001366252.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Monodelphis
domestica]
Length = 520
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 171/368 (46%), Gaps = 52/368 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 160 GLRNLGNTCFMNAILQSLS---NIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 216
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 217 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 273
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG SS ING S+VV IFGG LQ++V CL CG
Sbjct: 274 -----LELQGGFNGVSRSVILQENSSLSASNKCCINGASTVVTAIFGGILQNEVNCLICG 328
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 329 TESRKFDPFLDLSLDIPSQFRNKRSKNQENGPLCSLRDCLRSFTDLEELDETELYMCHKC 388
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 389 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 447
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ + V+ K YIL
Sbjct: 448 GPESCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEETVVKAKAYIL 506
Query: 349 FFIRANQR 356
F++ R
Sbjct: 507 FYVERQAR 514
>gi|313234636|emb|CBY10591.1| unnamed protein product [Oikopleura dioica]
Length = 482
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 184/372 (49%), Gaps = 47/372 (12%)
Query: 11 WQP-----SLLSEKRKR----GGPPLGLRNL---GNSCYLNSVLQCLTYTPPLANFCLKL 58
W+P + L + KR G LGLR L GN+C++N V+Q LT++P L ++ L
Sbjct: 131 WEPEKIDLNFLGQHAKRLTVDGRSTLGLRGLVNQGNTCFMNVVIQALTHSPVLRDYFLME 190
Query: 59 QHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFK 118
+H C S + E + I ++ S +T P ++ + +E+
Sbjct: 191 KHPR-CSPSEISSCIVCEFSQ-----IFQEFFSNENSNPMT---PYRLLLLVWRNSEYLA 241
Query: 119 CGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGAL 178
Q+DAHEFL V+D H RL+ R GGS G E S++ ++F G +
Sbjct: 242 GYEQQDAHEFLIAVLDMIHE---RLQP--RIEGGSIDLTGHAE-----RSIIDQVFTGYM 291
Query: 179 QSQVKCLACGAESNKVDEIMDISLDI--LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKK 236
QS V C CG S +D + DISLDI + S SL + + KF + E L +K C C K
Sbjct: 292 QSNVVCNQCGNISQTIDPLRDISLDIPQVPSASLMDCLSKFTKKEQLGNASKINCKKCGK 351
Query: 237 LVSARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQDP-Q 292
+ KQ++I + P + + LKRFE G K+ ++F + L + FM A
Sbjct: 352 RQESSKQLTISRLPVVACLHLKRFEQTATGSRSKVATPVSFPKTLDMGPFMSSARNTSLS 411
Query: 293 PE--------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK 344
PE Y+LF + H G + SGHY ++I+ W+ C+DS ++ +++++VL+ +
Sbjct: 412 PEFCDSAHYKYELFAVVNHMG-NLQSGHYTSFIRQT-SSWFRCDDSLITKASIEQVLNSE 469
Query: 345 VYILFFIRANQR 356
Y+LF+ + + R
Sbjct: 470 AYLLFYHKKSIR 481
>gi|312091085|ref|XP_003146855.1| ubiquitin carboxyl-terminal hydrolase [Loa loa]
gi|307757982|gb|EFO17216.1| ubiquitin carboxyl-terminal hydrolase [Loa loa]
Length = 497
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 159/361 (44%), Gaps = 58/361 (16%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q + +TP L ++ L QH A + K +C C L
Sbjct: 157 GLVNLGNTCFMNCIIQAIVHTPHLKDYFLTDQHHC---------ASSSYSKAQCLMCELS 207
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
D+T P + + + A H Q+DAHEF +D H
Sbjct: 208 NTFQEFYKGDVTPYKPNRFLNLVWTHARHLAGYEQQDAHEFFIAALDVLHR--------- 258
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI--- 204
SG T N + ++ IF G LQS + C CG S VD DISLD+
Sbjct: 259 -----HSGSSSLPSTPNECNCIIDWIFTGKLQSDLTCSICGCVSTTVDPFWDISLDVAQE 313
Query: 205 -----------LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
L +L++ + ++ PE L N K KC C+ + KQ+++ P +
Sbjct: 314 VLRSPSSSSGSLQQITLEDCLHRYIMPEHLGSNAKTKCARCETYEESTKQLTLKTLPMVA 373
Query: 254 VIQLKRFEGIFGG--KIDKAIAFEEVLVLS----SFMCKASQDPQ--------------P 293
LKRFE K+D I + + + ++ SF +++ PQ
Sbjct: 374 CFHLKRFEHSHKDRKKMDTKIKYPQFIDMTPFTASFRERSTGAPQNKTSVVTDLLTTNRN 433
Query: 294 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 353
+Y+LF + H G + +SGHY YI+ +W+ C+D V+ + VLS + Y+LF+ +
Sbjct: 434 KYELFAVVNHLG-TMESGHYTCYIRHQRNQWFQCDDQKVTKVPTERVLSSQGYLLFYHKC 492
Query: 354 N 354
+
Sbjct: 493 H 493
>gi|291407490|ref|XP_002719920.1| PREDICTED: ubiquitin thiolesterase 22 [Oryctolagus cuniculus]
Length = 803
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 165/363 (45%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H C+ + + C C +
Sbjct: 444 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHR--CEMPSPEL---------CLVCEMS 492
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 493 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 545
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 546 -KGDDV---GKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 601
Query: 208 ------------------------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
+L + +++F +PE L + K KC C+ + KQ
Sbjct: 602 STSFWPMSPGRESSVNGESHLPGISTLTDCLRRFTRPEHLGSSAKIKCGGCQSYQESTKQ 661
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 662 LTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKESRINGQLQLPTN 721
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + +Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 722 SGSNENKYSLFAVVNHQG-TLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYL 780
Query: 348 LFF 350
LF+
Sbjct: 781 LFY 783
>gi|395856749|ref|XP_003800781.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 22 [Otolemur garnettii]
Length = 725
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 162/364 (44%), Gaps = 64/364 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H C+ + S C C +
Sbjct: 377 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHR--CEMQSPSS---------CLVCEMS 425
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + P K+ + A H Q+DAHEFL +D H C
Sbjct: 426 SLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC------- 478
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C C S +D DISLD+ S
Sbjct: 479 -KG---DDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGS 534
Query: 208 -------------------------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
+L + +++F +PE L + K KC C + K
Sbjct: 535 STPFWPLSPGSEGSVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTK 594
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKA------SQDPQP- 293
Q+++ + P + LKRFE KI ++F L ++ FM + Q QP
Sbjct: 595 QLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPV 654
Query: 294 -------EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 346
+Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y
Sbjct: 655 DSLSSDNKYSLFAVVNHQG-TLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGY 713
Query: 347 ILFF 350
+LF+
Sbjct: 714 LLFY 717
>gi|296213409|ref|XP_002753258.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Callithrix jacchus]
Length = 520
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 173/370 (46%), Gaps = 66/370 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFC--------LKLQHSSLCKQLT------GDSAL 73
GLRNLGN+C++N++LQ L+ + FC ++L++ + T GDS +
Sbjct: 160 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDSNV 216
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
+ C L + + S + KI +F+ +Q+DAHEF+RY++
Sbjct: 217 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMP-------NFRGYQQQDAHEFMRYLL 269
Query: 134 DACHNTCLRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQ 181
D H L +GG S+ ING S+VV IFGG LQ++
Sbjct: 270 DHLH--------LELQGGFNGVSRSAILQENSTLFASNKCCINGASTVVTAIFGGILQNE 321
Query: 182 VKCLACGAESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNN 227
V CL CG ES K D +D+SLDI + CSL++ ++ F E LD
Sbjct: 322 VNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETE 381
Query: 228 KYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFM 284
Y C CKK + K+ I + P +L + LKRF K+D + F L + ++
Sbjct: 382 LYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYL 441
Query: 285 CKASQDPQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVL 341
+ ++ PE Y L +VH G SGHY AY GRW+ NDS V+V+ + V+
Sbjct: 442 LEP-ENSGPESCLYDLAAVVVHHGSGVGSGHYTAYAAHE-GRWFHFNDSTVTVTDEETVV 499
Query: 342 SEKVYILFFI 351
K YILF++
Sbjct: 500 KAKAYILFYV 509
>gi|426233170|ref|XP_004010590.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Ovis
aries]
Length = 520
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 173/370 (46%), Gaps = 66/370 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFC--------LKLQHSSLCKQLT------GDSAL 73
GLRNLGN+C++N++LQ L+ + FC ++L++ + T GDS +
Sbjct: 160 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDSNV 216
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
+ C L + + S + KI +F+ +Q+DAHEF+RY++
Sbjct: 217 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMP-------NFRGYQQQDAHEFMRYLL 269
Query: 134 DACHNTCLRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQ 181
D H L +GG S+ ING S+VV IFGG LQ++
Sbjct: 270 DHLH--------LELQGGFNGISRSSILQENSTLSASNKCCINGASTVVTAIFGGILQNE 321
Query: 182 VKCLACGAESNKVDEIMDISLDILN--------------SCSLKEAMQKFFQPEVLDGNN 227
V CL CG ES K D +D+SLDI + +CSL++ ++ F E LD
Sbjct: 322 VNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPTCSLRDCLRSFTDLEELDETE 381
Query: 228 KYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFM 284
Y C CKK + K+ I + P +L + LKRF K+D + F L + ++
Sbjct: 382 LYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYL 441
Query: 285 CKASQDPQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVL 341
+ ++ PE Y L +VH G SGHY AY GRW+ NDS V+++ V+
Sbjct: 442 LEP-ENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEDTVV 499
Query: 342 SEKVYILFFI 351
K YILF++
Sbjct: 500 KAKAYILFYV 509
>gi|148699415|gb|EDL31362.1| mCG1344 [Mus musculus]
Length = 629
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 167/361 (46%), Gaps = 58/361 (16%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+ P L F L +H + +T S C C +
Sbjct: 289 GLINLGNTCFMNCIVQVLTHIPLLKEFFLSNKHKCM---MTSPSL--------CLVCEMS 337
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I AEH RQ+DA EFL ++D H + R
Sbjct: 338 LLFQAMYSGNQSPHIPYKLLHLIWIHAEHLAGYRQQDAQEFLIAILDVLH------RHSR 391
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL-- 205
G G N + ++ IF G+LQS + C C S +D DISLD+
Sbjct: 392 DDGIDQEGNS------NCCNCIIDHIFTGSLQSDLTCQVCHGVSTTIDPCWDISLDLPGP 445
Query: 206 ------------------NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSIL 247
SL + ++ F +PE L + K KC C+ + KQ+++
Sbjct: 446 YTPGRASSSTSSRDGQKPRVISLTDCLKWFTRPEDLGSSAKIKCSQCQSYQESTKQLTMK 505
Query: 248 QSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQDP---QP--------- 293
+ P + LKRFE G KI+ I+F L ++ F+ + QP
Sbjct: 506 KLPIVACFHLKRFEHLGKQRRKINSFISFPLELDMTPFLASTKESIMKGQPLTECVPSEN 565
Query: 294 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 353
+Y LF I H G + +SGHY ++++ +W+ C+D+ V+ +T++E+L+ + Y+LF+ R
Sbjct: 566 KYSLFAVINHHG-TLESGHYTSFVRQEKDQWFSCDDAVVTKATMEELLNSEGYLLFYHRQ 624
Query: 354 N 354
+
Sbjct: 625 D 625
>gi|308505570|ref|XP_003114968.1| CRE-USP-3 protein [Caenorhabditis remanei]
gi|308259150|gb|EFP03103.1| CRE-USP-3 protein [Caenorhabditis remanei]
Length = 547
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 165/342 (48%), Gaps = 33/342 (9%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GLRN+GN+C++N+VLQ L + + L + + ++ E+ + C
Sbjct: 229 PRGLRNIGNTCFMNAVLQALASIYDFREYIMSLP--------SLEDYVEDEKLSKNGNCF 280
Query: 86 LE---KRIVRSLSVDLTLD--APAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
L ++++ S+S D AP + + F+ RQ D+HEFLRY++D +
Sbjct: 281 LTDEYRKLLISMSAKNYRDPTAPNEFREAFVSACPRFRGFRQHDSHEFLRYLLDQLNTEM 340
Query: 141 LRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDI 200
+ + L + + + + + F G LQS V C C SNK+DE MD+
Sbjct: 341 RKCRHL-------------PDMPDDKVTPISKHFEGILQSSVICQTCRNCSNKMDEFMDL 387
Query: 201 SLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQ 256
SLD+ L + + FFQ E+L+ K +C CK + KQM I + P++L +
Sbjct: 388 SLDVPRLSKARIRLSDCLDLFFQKELLEKGEKPECSKCKSKQTCSKQMFIKKLPDVLCLH 447
Query: 257 LKRFEGIFGGKIDKAIAFEEV-LVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYA 315
+KRF GGKID I F L + F+ + S +P Y L IVH G+ SGHY A
Sbjct: 448 IKRFRDN-GGKIDTLIEFPMAGLSVDDFLTEDSDEPPCVYDLQSIIVHIGYGCSSGHYIA 506
Query: 316 YIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
+ + +WY +D+ V V +K Y+L + ++ ++P
Sbjct: 507 FGRRG-QKWYQFDDTVVKPVDTSLVSKQKAYVLMYTKSTRKP 547
>gi|354485985|ref|XP_003505162.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like, partial
[Cricetulus griseus]
Length = 541
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 165/363 (45%), Gaps = 63/363 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 182 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRC-----------EMPSPELCLVCEMS 230
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 231 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 283
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 284 -KGDDV---GKVASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 339
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ + KQ
Sbjct: 340 CTSFWPMSPGRESSMNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCSSCQSYQESTKQ 399
Query: 244 MSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA-------------- 287
+++ + P + KRFE KI I+F L ++ FM +
Sbjct: 400 LTMKKLPVVACFHFKRFEHSAKQRRKITTYISFPLELDMTPFMASSKETRMNGQLQLPTN 459
Query: 288 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
S + + +Y LF + H G + +SGHY ++I+ +W+ C+D+ + +++++VL+ + Y+
Sbjct: 460 SGNNENKYSLFAGVNHQG-TLESGHYTSFIRHHRDQWFKCDDAVIIKASIKDVLNSEGYL 518
Query: 348 LFF 350
LF+
Sbjct: 519 LFY 521
>gi|403357049|gb|EJY78138.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 490
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 175/352 (49%), Gaps = 41/352 (11%)
Query: 24 GPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPF 83
GPP GLRN+GN+C+LNS+LQC+ +P L ++ L Q S + R + +
Sbjct: 156 GPPPGLRNIGNTCFLNSILQCIFASPYLNDYFLG--------QYQKGSGVGKARLADA-Y 206
Query: 84 CILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
L K++ + ++ P ++ + A F Q+DA EFLR+++D H R+
Sbjct: 207 HSLIKQVKQGHETTIS---PTDLKYAVSKVAPQFSGYGQQDAQEFLRFLLDGLHEELNRV 263
Query: 144 KK--------LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVD 195
+K + S++ ++F G L ++++C +CG SN D
Sbjct: 264 RKKPAYKEMDFDKLPADQQSEKWWQYNKERDDSIITDLFTGQLMNKIECQSCGYCSNAFD 323
Query: 196 EIMDISLDILNSC-------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQ 248
D+S+ I S SL E ++ F + E ++ YKC CKK+ + +K+M++ +
Sbjct: 324 NFQDLSVSIPRSGVRITGYKSLDECLESFIKAESME-TCGYKCSKCKKVDNFKKEMTLYR 382
Query: 249 SPNILVIQLKRF--EGIFGGKIDKAIAFEEVLVLSSFMCKASQDP--QPEYKLFGTIVHS 304
P I+VI LKRF + K++ I + + LSS+ ++ + + +Y+L+G HS
Sbjct: 383 FPKIMVIHLKRFYNSSMRREKVNTTITIPQKIDLSSYAPHSNHESKKKAKYQLYGISHHS 442
Query: 305 GFSPDSGHYYAYIKDAI----GRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
G + GH YI +A G+WY CNDS+V + ++ S Y+LF+++
Sbjct: 443 G-TLYGGH---YIGEAFNFDDGKWYQCNDSWVKACS-PDLESASAYVLFYVQ 489
>gi|308802820|ref|XP_003078723.1| Ubiquitin C-terminal hydrolase (ISS) [Ostreococcus tauri]
gi|116057176|emb|CAL51603.1| Ubiquitin C-terminal hydrolase (ISS) [Ostreococcus tauri]
Length = 1084
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 162/348 (46%), Gaps = 38/348 (10%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLT-GDSALDAERKRECPFCI 85
GL N GN+CY NSVLQ L P ++ SS T G + R+ E
Sbjct: 744 FGLENFGNTCYCNSVLQALYACEPFRRALIERAMSSANGTSTSGRGWMSGRREPETLLDA 803
Query: 86 LEKRIVRSLSVDLTLD---APAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR 142
L + +S + +P LR E F+ +DAHEF ++++ C C
Sbjct: 804 LGD-LFHEISTQGKITGCVSPKAFIERLRKDNELFRGAMHQDAHEFFNFLLNEC---CEN 859
Query: 143 LK-KLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDIS 201
L+ +L+R G SG + + +IF G L +Q +C+ C +N+ + +D+S
Sbjct: 860 LESELKRSGDWESGR----------KTWIHDIFEGKLANQTRCMWCENTTNREECFLDLS 909
Query: 202 LDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE 261
+D+ + S+ + F E+LD N+K++CD C L A+K++ I +P +L + LKRF+
Sbjct: 910 VDVDQNTSITACLNNFSAKELLDKNDKFQCDRCGGLHEAQKRLLIQSAPKVLSLHLKRFK 969
Query: 262 GIFG----GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYI 317
I K++ + F L L + + + DP Y LF +VH G P+ GHY ++
Sbjct: 970 YIEALGRHAKLNHRVVFPSELKLPN-LSDDADDPDVRYVLFSVVVHIGSGPNHGHYVCFV 1028
Query: 318 KDAIGRWYCCNDSYVSV---STLQEVL----------SEKVYILFFIR 352
K+ RW+ +D V V L V SE Y+LFF R
Sbjct: 1029 KNN-HRWFLFDDDTVEVVDEEQLHRVFGSTVERGPMGSEHGYMLFFER 1075
>gi|345316872|ref|XP_003429803.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Ornithorhynchus
anatinus]
Length = 494
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 171/358 (47%), Gaps = 42/358 (11%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 134 GLRNLGNTCFMNAILQSLS---NIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 190
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACH--- 137
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 191 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLEL 250
Query: 138 ----NTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNK 193
N R L+ G S+ ING S+VV IFGG LQ++V CL CG ES K
Sbjct: 251 QGGFNGVSRSVILQENSGLSASNKC---CINGASTVVTAIFGGILQNEVNCLICGTESRK 307
Query: 194 VDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVS 239
D +D+SLDI + CSL++ ++ F E LD Y C CKK
Sbjct: 308 FDPFLDLSLDIPSQFRNKRSKNQENGPMCSLRDCLRSFTDLEELDETELYMCHKCKKKQK 367
Query: 240 ARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPE-- 294
+ K+ I + P +L + LKRF K+D + F L + ++ + ++ PE
Sbjct: 368 STKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENSGPESC 426
Query: 295 -YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 351
Y L +VH G SGHY AY GRW+ NDS V+++ + V+ K YILF++
Sbjct: 427 LYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEETVVKAKAYILFYV 483
>gi|395748703|ref|XP_002827183.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Pongo abelii]
Length = 746
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 160/364 (43%), Gaps = 64/364 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + + C C +
Sbjct: 398 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRC-----------EMQSPSSCLVCEMS 446
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + P K+ + A H Q+DAHEFL +D H C
Sbjct: 447 SLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC------- 499
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C C S +D DISLD+ S
Sbjct: 500 -KG---DDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGS 555
Query: 208 -------------------------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
+L + +++F +PE L + K KC C + K
Sbjct: 556 STPFWPLSPGSEGNVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTK 615
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKA------SQDPQP- 293
Q+++ + P + LKRFE KI ++F L ++ FM + Q QP
Sbjct: 616 QLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPT 675
Query: 294 -------EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 346
+Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y
Sbjct: 676 DSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGY 734
Query: 347 ILFF 350
+LF+
Sbjct: 735 LLFY 738
>gi|291402890|ref|XP_002718220.1| PREDICTED: ubiquitin thiolesterase 3 [Oryctolagus cuniculus]
Length = 520
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 170/368 (46%), Gaps = 52/368 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 160 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDTSV 216
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 217 SLVEEFRKTLCALWQGSQTAFSPESLFYVIWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 273
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ +NG S+VV IFGG LQ++V CL CG
Sbjct: 274 -----LELQGGFNGVSRSAVLQENSTLSASSKCCVNGASTVVTAIFGGILQNEVNCLICG 328
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 329 TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKC 388
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 389 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 447
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ + V K YIL
Sbjct: 448 DPENCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEETVGKAKAYIL 506
Query: 349 FFIRANQR 356
F++ R
Sbjct: 507 FYVEHQAR 514
>gi|410895865|ref|XP_003961420.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Takifugu
rubripes]
Length = 506
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 175/394 (44%), Gaps = 78/394 (19%)
Query: 10 SWQPS-----LLSE--KRKR--GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR+R +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 130 TWEPTKRELELLRHNPKRRRITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 189
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H Q+ DS C C + + S + P ++ + A H
Sbjct: 190 DRHKC---QMQSDS---------CLVCEMSQLFQEFYSGHRSPHIPFRLLHLVWTHARHL 237
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C G N + ++ +IF G
Sbjct: 238 AGYEQQDAHEFLIAALDVLHRHC------------KDDNGKKANNPNHCNCIIDQIFTGG 285
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDI------------------LN-------SCSLKE 212
LQS V C C S +D DISLD+ LN + +L +
Sbjct: 286 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGGDSSALNGESHATGATTLTD 345
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 346 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 405
Query: 271 AIAFEEVLVLSSFM-----------CKASQDP---QPEYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM C+ DP +Y LF + H G + +SGHY +
Sbjct: 406 YVSFPLELDMTPFMASSKESRMNGQCQQIVDPFNNDNKYSLFAVVNHQG-TLESGHYTTF 464
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 465 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 498
>gi|426233172|ref|XP_004010591.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Ovis
aries]
Length = 476
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 173/370 (46%), Gaps = 66/370 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFC--------LKLQHSSLCKQLT------GDSAL 73
GLRNLGN+C++N++LQ L+ + FC ++L++ + T GDS +
Sbjct: 116 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDSNV 172
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
+ C L + + S + KI +F+ +Q+DAHEF+RY++
Sbjct: 173 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMP-------NFRGYQQQDAHEFMRYLL 225
Query: 134 DACHNTCLRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQ 181
D H L +GG S+ ING S+VV IFGG LQ++
Sbjct: 226 DHLH--------LELQGGFNGISRSSILQENSTLSASNKCCINGASTVVTAIFGGILQNE 277
Query: 182 VKCLACGAESNKVDEIMDISLDILN--------------SCSLKEAMQKFFQPEVLDGNN 227
V CL CG ES K D +D+SLDI + +CSL++ ++ F E LD
Sbjct: 278 VNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPTCSLRDCLRSFTDLEELDETE 337
Query: 228 KYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFM 284
Y C CKK + K+ I + P +L + LKRF K+D + F L + ++
Sbjct: 338 LYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYL 397
Query: 285 CKASQDPQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVL 341
+ ++ PE Y L +VH G SGHY AY GRW+ NDS V+++ V+
Sbjct: 398 LEP-ENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEDTVV 455
Query: 342 SEKVYILFFI 351
K YILF++
Sbjct: 456 KAKAYILFYV 465
>gi|390479780|ref|XP_003735780.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 22-A-like [Callithrix jacchus]
Length = 759
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 159/347 (45%), Gaps = 54/347 (15%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + C C +
Sbjct: 423 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRC-----------EMPSPELCLVCEMS 471
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + + P K+ + I A H RQ+DAHEFL +D H C
Sbjct: 472 SLFRELYSGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHC------- 524
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C AC S +D DISLD+ S
Sbjct: 525 -KGDDV---GKAANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPGS 580
Query: 208 C------------------------SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
C +L + +++F +PE L + K KC +C+ ++ KQ
Sbjct: 581 CTSFWPMSPGRESSVNGESHIPGITTLTDCLRRFTRPEHLGSSAKIKCGSCQSYQASTKQ 640
Query: 244 MSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH 303
+++ + P + +R E A ++ SF+ + + +Y LF +V
Sbjct: 641 LTMTKLPVVACXHFRRVE-------HSANRXAQITTYISFLLELDMXXENKYSLFA-VVX 692
Query: 304 SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
S + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 693 SPKNLESGHYTSFIRHHKDQWFKCDDAVITKASIKDVLDSEGYLLFY 739
>gi|354474362|ref|XP_003499400.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus
griseus]
Length = 502
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 173/375 (46%), Gaps = 66/375 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFC--------LKLQHSSLCKQLT------GDSAL 73
GLRNLGN+C++N++LQ L+ + FC ++L++ + T GDS +
Sbjct: 142 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDSNV 198
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
+ C L + + S + KI +F+ +Q+DAHEF+RY++
Sbjct: 199 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMP-------NFRGYQQQDAHEFMRYLL 251
Query: 134 DACHNTCLRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQ 181
D H L +GG S+ ING S+VV IFGG LQ++
Sbjct: 252 DHLH--------LELQGGFNGVPRSSILQENSTLSANNKCCINGASTVVTAIFGGILQNE 303
Query: 182 VKCLACGAESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNN 227
V CL CG ES K D +D+SLDI + CSL++ ++ F E LD
Sbjct: 304 VNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQESGPVCSLRDCLRSFTDLEELDETE 363
Query: 228 KYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFM 284
Y C CKK + K+ I + P +L + LKRF K+D + F L + ++
Sbjct: 364 LYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYL 423
Query: 285 CKASQDPQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVL 341
+ ++ PE Y L +VH G SGHY AY GRW+ NDS V+V+ + V
Sbjct: 424 LEP-ENIGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTVTDEETVG 481
Query: 342 SEKVYILFFIRANQR 356
K YILF++ R
Sbjct: 482 KAKAYILFYVERQAR 496
>gi|359484748|ref|XP_003633155.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Vitis
vinifera]
Length = 587
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 173/392 (44%), Gaps = 81/392 (20%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERK--------- 78
GL NLGN+C++NSVLQ L +TPPL N+ L +H+ Q +++ ++R
Sbjct: 196 GLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRYYCQQKNNASNASKRNAASNDSNSN 255
Query: 79 ---RECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDA 135
R C C ++ S D T +PAK A + Q+DAHEF ++D
Sbjct: 256 KNLRLCLACDMDAMFSAVFSGDRTPYSPAKFLYSWWQHAANLASYEQQDAHEFFISMLDG 315
Query: 136 CHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVD 195
H ++ K +RK NG + +F G L+S V C+ACG S D
Sbjct: 316 IHE---KMGKDKRKTQSQG---------NGECCIAHRVFSGILRSDVMCMACGFTSTTYD 363
Query: 196 EIMDISLDI---------------LNSC----------------SLKEAMQKFFQPEVLD 224
+DISLD+ +SC +L + +F +PE L
Sbjct: 364 PCVDISLDLEPNQGVSTKMGSTKSHHSCNGEADSMNSSQNCGTSTLMGCLDRFTRPERLG 423
Query: 225 GNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI----FGGKIDKAIAFEEVLVL 280
+ K+ C C+ + KQMSI + P + +KRFE K+D+ + F L +
Sbjct: 424 SDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSIRNMSRKVDRYLQFPFSLDM 483
Query: 281 SSFMCK--------------------ASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDA 320
+ ++ AS + E++LF + H+G D+GHY Y++ +
Sbjct: 484 APYLSSSILRSRFGNRIFSFDGDEPDASNELSSEFELFAVVTHTG-KLDAGHYVTYLRLS 542
Query: 321 IGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+WY C+D++++ V + + Y++F+++
Sbjct: 543 -NQWYKCDDAWITQVNENIVRAAQGYMMFYVQ 573
>gi|395746826|ref|XP_003778518.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
Length = 498
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 170/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 138 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 194
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 195 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 251
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ ING S+VV IFGG LQ++V CL CG
Sbjct: 252 -----LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICG 306
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 307 TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKC 366
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 367 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 425
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ + V+ K YIL
Sbjct: 426 GPESCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEETVVKAKAYIL 484
Query: 349 FFI 351
F++
Sbjct: 485 FYV 487
>gi|326929002|ref|XP_003210661.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
[Meleagris gallopavo]
Length = 758
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 162/364 (44%), Gaps = 64/364 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H C+ + S C C +
Sbjct: 410 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHK--CEMQSPSS---------CLVCEMS 458
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + P ++ + A H Q+DAHEFL +D H C
Sbjct: 459 TLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC------- 511
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C C S +D DISLD+ S
Sbjct: 512 -KG---DDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGS 567
Query: 208 -------------------------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
+L + +++F +PE L + K KC C + K
Sbjct: 568 STPFWPLSPGSDGSVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTK 627
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKA------SQDPQP- 293
Q+++ + P + LKRFE KI ++F L ++ FM + Q QP
Sbjct: 628 QLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPT 687
Query: 294 -------EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 346
+Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y
Sbjct: 688 DSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGY 746
Query: 347 ILFF 350
+LF+
Sbjct: 747 LLFY 750
>gi|395746828|ref|XP_003778519.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
Length = 431
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 173/370 (46%), Gaps = 66/370 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFC--------LKLQHSSLCKQLT------GDSAL 73
GLRNLGN+C++N++LQ L+ + FC ++L++ + T GD+ +
Sbjct: 71 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 127
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
+ C L + + S + KI +F+ +Q+DAHEF+RY++
Sbjct: 128 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMP-------NFRGYQQQDAHEFMRYLL 180
Query: 134 DACHNTCLRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQ 181
D H L +GG S+ ING S+VV IFGG LQ++
Sbjct: 181 DHLH--------LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNE 232
Query: 182 VKCLACGAESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNN 227
V CL CG ES K D +D+SLDI + CSL++ ++ F E LD
Sbjct: 233 VNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETE 292
Query: 228 KYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFM 284
Y C CKK + K+ I + P +L + LKRF K+D + F L + ++
Sbjct: 293 LYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYL 352
Query: 285 CKASQDPQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVL 341
+ ++ PE Y L +VH G SGHY AY GRW+ NDS V+++ + V+
Sbjct: 353 LEP-ENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEETVV 410
Query: 342 SEKVYILFFI 351
K YILF++
Sbjct: 411 KAKAYILFYV 420
>gi|332235883|ref|XP_003267134.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
[Nomascus leucogenys]
Length = 498
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 170/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 138 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 194
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 195 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 251
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ ING S+VV IFGG LQ++V CL CG
Sbjct: 252 -----LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICG 306
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 307 TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKC 366
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 367 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 425
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ + V+ K YIL
Sbjct: 426 GPESCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEETVVKAKAYIL 484
Query: 349 FFI 351
F++
Sbjct: 485 FYV 487
>gi|147816255|emb|CAN77546.1| hypothetical protein VITISV_025214 [Vitis vinifera]
Length = 1043
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 144/269 (53%), Gaps = 27/269 (10%)
Query: 130 RYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGA 189
RY +D + CL K G G + +++V FGG L S++KC+ C
Sbjct: 432 RYAVDTMQSVCL-------KDTGVVG------PLAEDTTLVGLTFGGYLLSKIKCMKCXG 478
Query: 190 ESNKVDEIMDISLDILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQ 248
+S + + +MD++++I +L+EA+ +F E+LDG NKY+C C+ A+K++ +L+
Sbjct: 479 KSERCERMMDLTVEIDGDIGTLEEALAQFTATEILDGENKYQCGRCRSYEKAKKKLMVLE 538
Query: 249 SPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGF-- 306
+PNIL I LKRF+ GK++K++ F E L + +M + D P Y L+ +VH
Sbjct: 539 APNILTIVLKRFQSSNFGKLNKSVRFPETLNXTPYM-SGTDDRYPVYSLYAVVVHLDIMN 597
Query: 307 SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFAS 366
+ SGHY ++K+ +G W+ +DS V+ L VL E Y+L + P++ +
Sbjct: 598 AAFSGHYVCFVKNFLGDWFRIDDSTVTPVELDRVLLEGAYMLLY----ASPLA----LSR 649
Query: 367 NGVKSHENGKEAYKGVKGTVPLKAVATKP 395
N SHE GK + ++ VP ATKP
Sbjct: 650 NMAVSHE-GKLKMRNLEA-VPSSLAATKP 676
>gi|47681481|gb|AAT37507.1| UBP protein [Homo sapiens]
Length = 498
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 170/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 138 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 194
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 195 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 251
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ ING S+VV IFGG LQ++V CL CG
Sbjct: 252 -----LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICG 306
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 307 TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKC 366
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 367 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 425
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ + V+ K YIL
Sbjct: 426 GPESCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEETVVKAKAYIL 484
Query: 349 FFI 351
F++
Sbjct: 485 FYV 487
>gi|312069228|ref|XP_003137584.1| ubiquitin carboxyl-terminal hydrolase [Loa loa]
gi|307767248|gb|EFO26482.1| ubiquitin carboxyl-terminal hydrolase [Loa loa]
Length = 657
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 173/344 (50%), Gaps = 40/344 (11%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCIL 86
+GL N N C+LN+VLQ + + PLA + L + L S + ++C C L
Sbjct: 310 VGLCNYSNDCFLNAVLQIILHCIPLARY--------LGEHLPLFSCV-----KDCVACGL 356
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCL-RIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
+ I S+S PA I L + F H G QEDAHE L +++DA +
Sbjct: 357 ARFIRYSMSSRQPF-KPAWISFILEKAFPSHL-LGAQEDAHEALNHILDALDSEA----- 409
Query: 146 LRRKGGGSSGGGGGGETINGGSSV--VKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
+ G SS +NG + V+++F G L++Q++C AC A + +++L
Sbjct: 410 ---RNGISSSDRNFSNPLNGSRFLTPVEQLFVGTLRNQIQCSACSAILINYERFRELNLG 466
Query: 204 ILNSC-----SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLK 258
I SC +L++ + +F EVL N +KC NCK+ ++ IL++PN+L+IQ+K
Sbjct: 467 IKKSCYDRRLTLEDLLDDYFGSEVL---NNFKCTNCKRTTQIQRSSRILRAPNLLLIQIK 523
Query: 259 RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIK 318
RF FGGKI + F L L ++ + + Y+L G + H G + + GHY A ++
Sbjct: 524 RFNS-FGGKIGVHVNFSLRLDLQQYIHRTGE--SHVYELTGIVQHMGNAVEHGHYIAVVR 580
Query: 319 DAIGR-WYCCNDSYVSVSTLQEVLSEKVYILFFIR--ANQRPVS 359
GR +Y +D +L E+ + + YIL ++R A + PVS
Sbjct: 581 GFDGRSYYLFDDEQRHRVSLSELHNTQAYILLYVRCDAFRNPVS 624
>gi|344251056|gb|EGW07160.1| Ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus griseus]
Length = 435
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 173/375 (46%), Gaps = 66/375 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFC--------LKLQHSSLCKQLT------GDSAL 73
GLRNLGN+C++N++LQ L+ + FC ++L++ + T GDS +
Sbjct: 75 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDSNV 131
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
+ C L + + S + KI +F+ +Q+DAHEF+RY++
Sbjct: 132 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMP-------NFRGYQQQDAHEFMRYLL 184
Query: 134 DACHNTCLRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQ 181
D H L +GG S+ ING S+VV IFGG LQ++
Sbjct: 185 DHLH--------LELQGGFNGVPRSSILQENSTLSANNKCCINGASTVVTAIFGGILQNE 236
Query: 182 VKCLACGAESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNN 227
V CL CG ES K D +D+SLDI + CSL++ ++ F E LD
Sbjct: 237 VNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQESGPVCSLRDCLRSFTDLEELDETE 296
Query: 228 KYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFM 284
Y C CKK + K+ I + P +L + LKRF K+D + F L + ++
Sbjct: 297 LYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYL 356
Query: 285 CKASQDPQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVL 341
+ ++ PE Y L +VH G SGHY AY GRW+ NDS V+V+ + V
Sbjct: 357 LEP-ENIGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTVTDEETVG 414
Query: 342 SEKVYILFFIRANQR 356
K YILF++ R
Sbjct: 415 KAKAYILFYVERQAR 429
>gi|388453361|ref|NP_001252999.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
gi|383423389|gb|AFH34908.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
gi|384939762|gb|AFI33486.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
Length = 520
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 170/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 160 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 216
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 217 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 273
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ ING S+VV IFGG LQ++V CL CG
Sbjct: 274 -----LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICG 328
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 329 TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKC 388
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 389 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 447
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ + V+ K YIL
Sbjct: 448 GPESCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEETVVKAKAYIL 506
Query: 349 FFI 351
F++
Sbjct: 507 FYV 509
>gi|297696821|ref|XP_002825578.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pongo
abelii]
Length = 520
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 170/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 160 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 216
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 217 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 273
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ ING S+VV IFGG LQ++V CL CG
Sbjct: 274 -----LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICG 328
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 329 TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKC 388
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 389 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 447
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ + V+ K YIL
Sbjct: 448 GPESCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEETVVKAKAYIL 506
Query: 349 FFI 351
F++
Sbjct: 507 FYV 509
>gi|410212190|gb|JAA03314.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410255768|gb|JAA15851.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410292238|gb|JAA24719.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410334293|gb|JAA36093.1| ubiquitin specific peptidase 3 [Pan troglodytes]
Length = 520
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 170/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 160 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 216
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 217 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 273
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ ING S+VV IFGG LQ++V CL CG
Sbjct: 274 -----LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICG 328
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 329 TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKC 388
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 389 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 447
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ + V+ K YIL
Sbjct: 448 GPESCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEETVVKAKAYIL 506
Query: 349 FFI 351
F++
Sbjct: 507 FYV 509
>gi|449455503|ref|XP_004145492.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
sativus]
gi|449515075|ref|XP_004164575.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
sativus]
Length = 552
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 181/382 (47%), Gaps = 69/382 (18%)
Query: 16 LSEKRKRGGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLKLQHS--SLCKQLTGD 70
+ ++R + PLGLR NLGN+C++NSVLQ +TPPL+N+ L QH+ + K+ G
Sbjct: 165 VKDQRSKSCYPLGLRGLNNLGNTCFMNSVLQVFLHTPPLSNYFLNDQHNRETCSKRPIGQ 224
Query: 71 SALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLR 130
L + +C F + S D +PA+ + + C Q+DAHEF
Sbjct: 225 LCLPCD--IDCIFSAV-------FSGDHMPYSPAQFLYSWWQHSANLACYEQQDAHEFFI 275
Query: 131 YVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAE 190
V+D R+ + RK G + I F G L+S V C+ CG
Sbjct: 276 SVLD-------RIHERERKSRSQDKENGDCKCI------AHRAFSGQLRSDVTCMTCGFT 322
Query: 191 SNKVDEIMDISLDI--------------------LNSCSLKEAMQKFFQPEVLDGNNKYK 230
S D +DISLD+ + +L + F +PE L + K
Sbjct: 323 STTYDPCVDISLDLDTQDFSSRNIAGKLTKPADFSSKSTLSGCLDLFTRPEKLGSDQKLF 382
Query: 231 CDNCKKLVSARKQMSILQSPNILVIQLKRFEGIF----GGKIDKAIAF----EEVLVLSS 282
C NC++ ++ KQMSI + P +L + +KRFE F KID+ + F + + LSS
Sbjct: 383 CQNCQEKRNSVKQMSIRRLPLVLCLHIKRFEHSFIRRTSRKIDRYLQFPFSLDMIPYLSS 442
Query: 283 FMCK--------ASQ----DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDS 330
+ + AS+ D ++++F + HSG + +SGHY Y++ RWY C+D+
Sbjct: 443 SIIRNRFGNRIFASEGDELDASSKFEIFAVVSHSG-TLESGHYVTYLR-LRNRWYKCDDA 500
Query: 331 YVSVSTLQEVLSEKVYILFFIR 352
+++ + V + + Y++F+++
Sbjct: 501 WITEVDEEMVRNSQCYMMFYLQ 522
>gi|332235881|ref|XP_003267133.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Nomascus leucogenys]
Length = 520
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 170/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 160 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 216
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 217 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 273
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ ING S+VV IFGG LQ++V CL CG
Sbjct: 274 -----LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICG 328
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 329 TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKC 388
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 389 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 447
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ + V+ K YIL
Sbjct: 448 GPESCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEETVVKAKAYIL 506
Query: 349 FFI 351
F++
Sbjct: 507 FYV 509
>gi|90075368|dbj|BAE87364.1| unnamed protein product [Macaca fascicularis]
Length = 431
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 173/370 (46%), Gaps = 66/370 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFC--------LKLQHSSLCKQLT------GDSAL 73
GLRNLGN+C++N++LQ L+ + FC ++L++ + T GD+ +
Sbjct: 71 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 127
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
+ C L + + S + KI +F+ +Q+DAHEF+RY++
Sbjct: 128 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMP-------NFRGYQQQDAHEFMRYLL 180
Query: 134 DACHNTCLRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQ 181
D H L +GG S+ ING S+VV IFGG LQ++
Sbjct: 181 DHLH--------LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNE 232
Query: 182 VKCLACGAESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNN 227
V CL CG ES K D +D+SLDI + CSL++ ++ F E LD
Sbjct: 233 VNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETE 292
Query: 228 KYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFM 284
Y C CKK + K+ I + P +L + LKRF K+D + F L + ++
Sbjct: 293 LYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYL 352
Query: 285 CKASQDPQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVL 341
+ ++ PE Y L +VH G SGHY AY GRW+ NDS V+++ + V+
Sbjct: 353 LEP-ENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEETVV 410
Query: 342 SEKVYILFFI 351
K YILF++
Sbjct: 411 KAKAYILFYV 420
>gi|55770886|ref|NP_006528.2| ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Homo sapiens]
gi|205371844|sp|Q9Y6I4.2|UBP3_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|17390251|gb|AAH18113.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|30583377|gb|AAP35933.1| ubiquitin specific protease 3 [Homo sapiens]
gi|61359968|gb|AAX41792.1| ubiquitin specific protease 3 [synthetic construct]
gi|61359975|gb|AAX41793.1| ubiquitin specific protease 3 [synthetic construct]
gi|76828049|gb|AAI07138.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|76828053|gb|AAI07139.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|112180754|gb|AAH65300.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|119598057|gb|EAW77651.1| ubiquitin specific peptidase 3 [Homo sapiens]
gi|123980244|gb|ABM81951.1| ubiquitin specific peptidase 3 [synthetic construct]
gi|123995059|gb|ABM85131.1| ubiquitin specific peptidase 3 [synthetic construct]
gi|168277636|dbj|BAG10796.1| ubiquitin carboxyl-terminal hydrolase 3 [synthetic construct]
Length = 520
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 170/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 160 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 216
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 217 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 273
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ ING S+VV IFGG LQ++V CL CG
Sbjct: 274 -----LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICG 328
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 329 TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKC 388
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 389 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 447
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ + V+ K YIL
Sbjct: 448 GPESCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEETVVKAKAYIL 506
Query: 349 FFI 351
F++
Sbjct: 507 FYV 509
>gi|355692783|gb|EHH27386.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
gi|355778099|gb|EHH63135.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca
fascicularis]
Length = 490
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 170/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 130 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 186
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 187 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 243
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ ING S+VV IFGG LQ++V CL CG
Sbjct: 244 -----LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICG 298
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 299 TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKC 358
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 359 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 417
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ + V+ K YIL
Sbjct: 418 GPESCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEETVVKAKAYIL 476
Query: 349 FFI 351
F++
Sbjct: 477 FYV 479
>gi|345490133|ref|XP_001599439.2| PREDICTED: hypothetical protein LOC100114408 [Nasonia vitripennis]
Length = 823
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 169/350 (48%), Gaps = 28/350 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRN+GN+C++NSV+QCL+ T PL + L Q+ L T S++ + I E
Sbjct: 485 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQY--LTDINTTTSSMKGALIKAFSQVIQE 542
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ D ++ + ++S ++ FA F Q+DA EFLRY+++ H R+
Sbjct: 543 ---LWENDGDHVVNT-SSLKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKP 598
Query: 148 RK---------GGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ + S + ++F G L+S ++C C S +D
Sbjct: 599 QPIHTDIPDSYSDSMKAAESWKRYLRSEDSTIVDVFVGQLRSSLRCTVCDHVSVTLDPFW 658
Query: 199 DISLDILN---SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVI 255
D+SL I + + L + ++ F + EVLDG+ K C C+ K +I + P ILVI
Sbjct: 659 DLSLPIPSRSGTVRLNQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFAIQKFPKILVI 718
Query: 256 QLKRFEGI--FGGKIDKAIAFEEV-LVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGH 312
LKRF + F GK+ + F L LS+F Q Y L+G HSG + SGH
Sbjct: 719 HLKRFSPMERFRGKLSVLVDFPLTGLELSAFAAPRVQG--CTYNLYGVANHSG-TTHSGH 775
Query: 313 YYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSAN 361
Y AY K G W+ NDS V+ + + V+S + Y+LF+ Q+P S++
Sbjct: 776 YTAYCKHPYSGEWHEYNDSRVTPVSARSVVSSEAYVLFY---EQQPHSSH 822
>gi|114657520|ref|XP_001173962.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pan
troglodytes]
Length = 498
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 170/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 138 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 194
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 195 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 251
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ ING S+VV IFGG LQ++V CL CG
Sbjct: 252 -----LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICG 306
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 307 TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKC 366
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 367 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 425
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ + V+ K YIL
Sbjct: 426 GPESCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEETVVKAKAYIL 484
Query: 349 FFI 351
F++
Sbjct: 485 FYV 487
>gi|426379399|ref|XP_004056385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gorilla gorilla
gorilla]
Length = 724
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 160/356 (44%), Gaps = 76/356 (21%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRNLGN+C++N++LQ L S ++ RK C
Sbjct: 402 GLRNLGNTCFMNAILQSLR------------------------SLVEEFRKTLCAL---- 433
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
T +P + + +F+ +Q+DAHEF+RY++D H L
Sbjct: 434 ------WQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--------LE 479
Query: 148 RKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVD 195
+GG S+ ING S+VV IFGG LQ++V CL CG ES K D
Sbjct: 480 LQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFD 539
Query: 196 EIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSAR 241
+D+SLDI + CSL++ ++ F E LD Y C CKK +
Sbjct: 540 PFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKST 599
Query: 242 KQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPE---Y 295
K+ I + P +L + LKRF K+D + F L + ++ + ++ PE Y
Sbjct: 600 KKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENSGPESCLY 658
Query: 296 KLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 351
L +VH G SGHY AY GRW+ NDS V+++ + V+ K YILF++
Sbjct: 659 DLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEETVVKAKAYILFYV 713
>gi|55742515|ref|NP_001006783.1| ubiquitin thiolesterase 3 [Xenopus (Silurana) tropicalis]
gi|49523089|gb|AAH75590.1| ubiquitin specific peptidase 3 [Xenopus (Silurana) tropicalis]
Length = 467
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 173/361 (47%), Gaps = 48/361 (13%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 107 GLRNLGNTCFMNAILQSLS---NIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDVNV 163
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 164 SLVEEFRKTLCALWQGNQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 220
Query: 141 LRLKKLRRKGGGSSGG----------GGGGETINGGSSVVKEIFGGALQSQVKCLACGAE 190
+L+ + GSS ING S+VV +FGG LQ++V CL CG E
Sbjct: 221 ---LELQGEFDGSSHSVLSQANCSRSASNKCCINGASTVVTSVFGGVLQNEVNCLICGTE 277
Query: 191 SNKVDEIMDISLDILN--------------SCSLKEAMQKFFQPEVLDGNNKYKCDNCKK 236
S K D +D+SLDI + +C+L++ ++ F E LD Y C CKK
Sbjct: 278 SRKFDPFLDLSLDIPSQFRNKRCKNQENGPTCTLRDCLRSFTDLEELDETELYTCLKCKK 337
Query: 237 LVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQP 293
+ K+ I + P +L + LKRF K+D + F L + SF+ + ++ P
Sbjct: 338 KQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVDFPLRGLDMKSFLLEP-ENIGP 396
Query: 294 E---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
E Y L +VH G SGHY AY GRW+ NDS V+++ + V K YILF+
Sbjct: 397 ESCLYDLAAVVVHHGSGVGSGHYTAYATHK-GRWFHFNDSTVTLTEEETVAKAKAYILFY 455
Query: 351 I 351
+
Sbjct: 456 V 456
>gi|344293364|ref|XP_003418393.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Loxodonta
africana]
Length = 520
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 173/370 (46%), Gaps = 66/370 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFC--------LKLQHSSLCKQLT------GDSAL 73
GLRNLGN+C++N++LQ L+ + FC ++L++ + T GD+ +
Sbjct: 160 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 216
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
+ C L + + S + KI +F+ +Q+DAHEF+RY++
Sbjct: 217 SLVEEFRKTLCALWQGSPTAFSPESLFYVVWKIMP-------NFRGYQQQDAHEFMRYLL 269
Query: 134 DACHNTCLRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQ 181
D H L +GG S+ ING S+VV IFGG LQ++
Sbjct: 270 DHLH--------LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGVLQNE 321
Query: 182 VKCLACGAESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNN 227
V CL CG ES K D +D+SLDI + CSL++ ++ F E LD
Sbjct: 322 VNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETE 381
Query: 228 KYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFM 284
Y C CKK + K+ I + P +L + LKRF K+D + F L + ++
Sbjct: 382 LYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYL 441
Query: 285 CKASQDPQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVL 341
+ ++ PE Y L +VH G SGHY A+ GRW+ NDS V+++ + VL
Sbjct: 442 LEP-ENSGPENCLYDLAAVVVHHGSGVGSGHYTAFATHE-GRWFHFNDSTVTLTDEETVL 499
Query: 342 SEKVYILFFI 351
K YILF++
Sbjct: 500 KAKAYILFYV 509
>gi|380798287|gb|AFE71019.1| ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
Length = 491
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 170/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 131 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 187
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 188 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 244
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ ING S+VV IFGG LQ++V CL CG
Sbjct: 245 -----LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICG 299
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 300 TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKC 359
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 360 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 418
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ + V+ K YIL
Sbjct: 419 GPESCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEETVVKAKAYIL 477
Query: 349 FFI 351
F++
Sbjct: 478 FYV 480
>gi|410961062|ref|XP_003987104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Felis catus]
Length = 503
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 170/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 143 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 199
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 200 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 256
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ G ING S+VV IFGG LQ++V CL CG
Sbjct: 257 -----LELQGGFNGVSRSAILQENSALSGSNKCCINGASTVVTAIFGGILQNEVNCLICG 311
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 312 TESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKC 371
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 372 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 430
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ V+ K YIL
Sbjct: 431 GPESCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEDTVVKAKAYIL 489
Query: 349 FFI 351
F++
Sbjct: 490 FYV 492
>gi|194376096|dbj|BAG62807.1| unnamed protein product [Homo sapiens]
Length = 476
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 170/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 116 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 172
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 173 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 229
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ ING S+VV IFGG LQ++V CL CG
Sbjct: 230 -----LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICG 284
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 285 TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKC 344
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 345 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 403
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ + V+ K YIL
Sbjct: 404 GPESCLYDLAAVVVHHGSGVGSGHYIAYATHE-GRWFHFNDSTVTLTDEETVVKAKAYIL 462
Query: 349 FFI 351
F++
Sbjct: 463 FYV 465
>gi|334333006|ref|XP_001370855.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
[Monodelphis domestica]
Length = 880
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 160/364 (43%), Gaps = 64/364 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + + C C +
Sbjct: 532 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKC-----------EMQSPSSCLVCEMS 580
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + P ++ + A H Q+DAHEFL +D H C
Sbjct: 581 TLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC------- 633
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C C S +D DISLD+ S
Sbjct: 634 -KG---DDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGS 689
Query: 208 -------------------------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
+L + +++F +PE L + K KC C + K
Sbjct: 690 STPFWPLSPGSDGSVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTK 749
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKA------SQDPQP- 293
Q+++ + P + LKRFE KI ++F L ++ FM + Q QP
Sbjct: 750 QLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPT 809
Query: 294 -------EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 346
+Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y
Sbjct: 810 DSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGY 868
Query: 347 ILFF 350
+LF+
Sbjct: 869 LLFY 872
>gi|332029700|gb|EGI69579.1| Ubiquitin carboxyl-terminal hydrolase 22 [Acromyrmex echinatior]
Length = 501
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 172/398 (43%), Gaps = 83/398 (20%)
Query: 6 ELQMSWQPSLLSEKRKRGGP---------PLGLR---NLGNSCYLNSVLQCLTYTPPLAN 53
E +W+P+ + R P +GLR NLGN+C++N ++Q L +TP L +
Sbjct: 126 EFYRAWEPTQTEAELLRNHPRRRRVVENSTIGLRGLINLGNTCFVNCIVQALIHTPLLRD 185
Query: 54 FCLKLQHS----SLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSC 109
+ L +H SLC C L + LTL K+
Sbjct: 186 YFLADRHHCPQPSLC--------------LVCEVSHLFQEFYSGNKAPLTLH---KLLHL 228
Query: 110 LRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSV 169
+ H Q+DAHEF +D H C L + + + +
Sbjct: 229 IWTHVRHLAGYEQQDAHEFFIATLDVLHKHCEATTILVK------------DNPHHCKCI 276
Query: 170 VKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCS------------LKEAMQKF 217
+ +IF G LQS V C AC S +D DISLD+ ++ S L + ++KF
Sbjct: 277 IDQIFTGCLQSDVVCQACNGVSTTIDPFWDISLDLTSAASTSGSNTPGPPTSLLDCLEKF 336
Query: 218 FQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEG------IFGGKIDKA 271
+ E L + K KC NC+ + KQ+++ Q P + + LKRFE IF KI
Sbjct: 337 TRAEHLGSSAKIKCSNCETYQESTKQLTMKQLPIVAIFHLKRFEHFIIQDKIFKKKISTF 396
Query: 272 IAFEEVLVLSSFM----------------CKASQD---PQPEYKLFGTIVHSGFSPDSGH 312
I+F E L ++ FM K +D Y LF I H G S ++GH
Sbjct: 397 ISFPEQLDMTPFMSHRRNGNNNSAMLNGLSKNGEDMSFSDNRYSLFAVINHEG-SLETGH 455
Query: 313 YYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
Y A+I+ +W+ CND ++ + L++VL+ + Y+LF+
Sbjct: 456 YTAFIRQQRDQWFKCNDHLITRAKLKDVLTSEGYLLFY 493
>gi|118366697|ref|XP_001016564.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89298331|gb|EAR96319.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 751
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 168/350 (48%), Gaps = 20/350 (5%)
Query: 12 QPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDS 71
+PS L +K+ G GL N N CYLN+ +QCL P L ++ L ++ + K
Sbjct: 408 RPSQLFKKQALGV--RGLHNQSNYCYLNASVQCLLSIPELNSYFLSEEYRRVVKIQGTRK 465
Query: 72 ALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRY 131
AL + P ++ S + LD + + F H Q DA EF+RY
Sbjct: 466 AL-----KIVPVYADMIKLYEKTSENNILDMNLLKKVIKKPFIPH----EQHDAQEFIRY 516
Query: 132 VIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAES 191
++ + + + + +S++ IF G L S V C CG S
Sbjct: 517 ILSEIQDELNPILPSKNPTQFKDSEEAYQYYLRFQNSIIDYIFSGQLSSNVNCSKCGYIS 576
Query: 192 NKVDEIMDISLDI-LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSP 250
D +D+SL + + S+++ + KFF E+L + YKC+ C + A+KQ+ I ++P
Sbjct: 577 RTYDPFLDLSLGMDSKTTSVQDCLNKFFSEEILSDD--YKCEKCNQNNKAKKQVLISKTP 634
Query: 251 NILVIQLKRFEGIF--GGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFS 307
IL + LKRF+ I+ KI I + + L + ++ +S Y L G IVHSG S
Sbjct: 635 YILTLHLKRFK-IYPKKRKITDFIKYPIQNLSIKQYVKNSSTSGGYYYNLIGIIVHSG-S 692
Query: 308 PDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRP 357
DSGHY +Y+K RW+CC+D + + V+ ++VY+LF+ R + P
Sbjct: 693 QDSGHYISYVKRE-NRWFCCDDGKYQEVSEKTVIKQEVYLLFYQRIEESP 741
>gi|297696819|ref|XP_002825577.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Pongo
abelii]
gi|332235885|ref|XP_003267135.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3
[Nomascus leucogenys]
Length = 476
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 170/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 116 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 172
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 173 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 229
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ ING S+VV IFGG LQ++V CL CG
Sbjct: 230 -----LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICG 284
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 285 TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKC 344
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 345 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 403
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ + V+ K YIL
Sbjct: 404 GPESCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEETVVKAKAYIL 462
Query: 349 FFI 351
F++
Sbjct: 463 FYV 465
>gi|375493565|ref|NP_001243631.1| ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Homo sapiens]
Length = 476
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 170/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 116 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 172
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 173 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 229
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ ING S+VV IFGG LQ++V CL CG
Sbjct: 230 -----LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICG 284
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 285 TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKC 344
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 345 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 403
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ + V+ K YIL
Sbjct: 404 GPESCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEETVVKAKAYIL 462
Query: 349 FFI 351
F++
Sbjct: 463 FYV 465
>gi|149758247|ref|XP_001488653.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Equus
caballus]
Length = 480
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 102 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 161
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 162 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 210
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N S ++ +IF G
Sbjct: 211 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCSCIIDQIFTGG 259
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 260 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGESHVSGTTTLTD 319
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 320 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 379
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 380 YVSFPLELDMTPFMASSKESRMNGQYQQPMDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 438
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 439 IRQHKDQWFKCDDAIITKASIEDVLDSEGYLLFY 472
>gi|400261275|pdb|4FIP|A Chain A, Structure Of The Saga Ubp8(S144n)SGF11(1-72,
Delta-Znf)SUS1SGF73 Dub Module
gi|400261279|pdb|4FIP|E Chain E, Structure Of The Saga Ubp8(S144n)SGF11(1-72,
Delta-Znf)SUS1SGF73 Dub Module
gi|400261291|pdb|4FK5|A Chain A, Structure Of The Saga Ubp8(S144n)SGF11SUS1SGF73 DUB MODULE
Length = 476
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 170/362 (46%), Gaps = 46/362 (12%)
Query: 14 SLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSAL 73
+++ +R G GL N+GN+C+++S+LQCL + P + HS+ CK + D
Sbjct: 130 TMVPSMERRDGLS-GLINMGNTCFMSSILQCLIHNPYFIRHSMSQIHSNNCKVRSPD--- 185
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAK-------------IQSCLRIFAEHFKCG 120
+C C L+K IV L L + + +C ++
Sbjct: 186 ------KCFSCALDK-IVHELYGALNTKQASSSSTSTNRQTGFIYLLTCAWKINQNLAGY 238
Query: 121 RQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQS 180
Q+DAHEF +++I+ H + + L S E I V +F G+L+S
Sbjct: 239 SQQDAHEFWQFIINQIHQS--YVLDLPNAKEVSRANNKQCECI------VHTVFEGSLES 290
Query: 181 QVKCLACGAES-NKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVS 239
+ C C S +D +D+SLDI + L E + F + E L N Y C C
Sbjct: 291 SIVCPGCQNNSKTTIDPFLDLSLDIKDKKKLYECLDSFHKKEQLKDFN-YHCGECNSTQD 349
Query: 240 ARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQDPQPE-- 294
A KQ+ I + P++LV+QLKRFE + G K+D I F L + ++ +D E
Sbjct: 350 AIKQLGIHKLPSVLVLQLKRFEHLLNGSNRKLDDFIEFPTYLNMKNYCSTKEKDKHSENG 409
Query: 295 ------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
Y+L G + H G + + GHY A+ K + G+W+ NDS VS + +EVL E+ Y+L
Sbjct: 410 KVPDIIYELIGIVSHKG-TVNEGHYIAFCKISGGQWFKFNDSMVSSISQEEVLKEQAYLL 468
Query: 349 FF 350
F+
Sbjct: 469 FY 470
>gi|348583870|ref|XP_003477695.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cavia
porcellus]
Length = 520
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 174/370 (47%), Gaps = 66/370 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFC--------LKLQHSSLCKQLT------GDSAL 73
GLRNLGN+C++N++LQ L+ + FC ++L++ + T GDS++
Sbjct: 160 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDSSV 216
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
+ C L + + S + KI +F+ +Q+DAHEF+RY++
Sbjct: 217 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMP-------NFRGYQQQDAHEFMRYLL 269
Query: 134 DACHNTCLRLKKLRRKGG--GSSGGGGGGET----------INGGSSVVKEIFGGALQSQ 181
D H L +GG G SG E ING S+VV +FGG LQ++
Sbjct: 270 DHLH--------LELQGGFNGVSGTAILQENSSLAASNKCCINGASTVVTAVFGGVLQNE 321
Query: 182 VKCLACGAESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNN 227
V CL CG ES K D +D+SLDI + CSL++ ++ F E LD
Sbjct: 322 VNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETE 381
Query: 228 KYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFM 284
Y C CKK + K+ I + P +L + LKRF K+D + F L + ++
Sbjct: 382 LYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYL 441
Query: 285 CKASQDPQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVL 341
+ ++ PE Y L +VH G SGHY AY GRW+ NDS V+++ V
Sbjct: 442 LEP-ENSGPESCLYDLAAVVVHHGSGVGSGHYTAYAVHE-GRWFHFNDSTVTLTDEDTVG 499
Query: 342 SEKVYILFFI 351
K YILF++
Sbjct: 500 KAKAYILFYV 509
>gi|345795041|ref|XP_544715.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Canis
lupus familiaris]
Length = 520
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 169/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 160 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 216
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 217 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 273
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ ING S+VV IFGG LQ++V CL CG
Sbjct: 274 -----LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICG 328
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 329 TESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKC 388
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 389 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 447
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ V+ K YIL
Sbjct: 448 GPEHCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEDTVVKAKAYIL 506
Query: 349 FFI 351
F++
Sbjct: 507 FYV 509
>gi|414585137|tpg|DAA35708.1| TPA: hypothetical protein ZEAMMB73_275507 [Zea mays]
Length = 563
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 171/380 (45%), Gaps = 70/380 (18%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSS-LCKQLTG--DSALDAERKRECPFC 84
GL NLGN+C++NSVLQ L + PPL N+ L +H+ LC + T A DA+R C C
Sbjct: 185 GLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRFLCPRRTPVRHRASDADRV-ACLAC 243
Query: 85 ILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLK 144
L++ + S D T +PAK A + Q+DAHEF ++D H +
Sbjct: 244 DLDEIYSAAFSGDRTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIH------E 297
Query: 145 KLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI 204
++ S G +G + +F G L+S V C +CG S + MDISLD+
Sbjct: 298 NIKDDQQKSYAQG------HGDCCIAHRVFSGILRSDVTCTSCGFTSTTFEPCMDISLDM 351
Query: 205 --------------------------LNS--CSLKEAMQKFFQPEVLDGNNKYKCDNCKK 236
+NS +L +++F + E LD K+ C++C +
Sbjct: 352 DAGDNSSFGVANTKSHVRNGERGLAGVNSKVLTLMRCLERFTRSERLDAEQKFFCEHCNE 411
Query: 237 LVSARKQMSILQSPNILVIQLKRFEGI----FGGKIDKAIAFEEVLVLSSFM-------- 284
+ KQMSI + P + +KRFE K+D + F L ++ ++
Sbjct: 412 RQESLKQMSIRRLPLVSCFHIKRFEHSSVKKVSRKVDHCLQFPFSLDMAPYLSSSILRSR 471
Query: 285 ------------CKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYV 332
A + E+++F I HSG ++GHY Y++ WY C+D++V
Sbjct: 472 YGNRIFPAEASDADAVSEVSSEFEIFAVITHSG-KLEAGHYVTYLR-LNNHWYKCDDAWV 529
Query: 333 SVSTLQEVLSEKVYILFFIR 352
+ V + + Y+LF+++
Sbjct: 530 TRVEEHTVRTSQAYMLFYVQ 549
>gi|403357200|gb|EJY78221.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 473
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 172/347 (49%), Gaps = 32/347 (9%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCIL 86
LGL+N+GN+CY+NS+LQCL + PL+++ L + + ++ + R+ + +
Sbjct: 123 LGLKNIGNTCYMNSILQCLFASLPLSDYFL----NGVFRKDYENQVRPINIGRDFFYLL- 177
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL--- 143
+++ + + P ++ + + F+ Q+DA EFLR +D + R+
Sbjct: 178 --NAIQNATQGQGVAVPQDLKLSISKKSSQFRSSGQQDAQEFLRCFLDQLNEELNRVTIK 235
Query: 144 -----KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ G + SS++++IF G L + KC CG ES+K D M
Sbjct: 236 PPYKEENFDNLSVQEQSEGWWRYYKSRESSIIQDIFEGQLHIRTKCQLCGYESHKFDNFM 295
Query: 199 DISLDIL---------NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQS 249
DIS+ + S L + +Q+F + E ++ YKC++CKK + + QM+I +
Sbjct: 296 DISVPVPQVSDQSSRGQSVQLDQCLQQFIKEEDMEKCG-YKCNHCKKEDNFKNQMTISRF 354
Query: 250 PNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CKASQDPQPEYKLFGTIVHS 304
P ILV+ LKRF+ + K++ I +++ +S F +A + Y +FG H
Sbjct: 355 PKILVLHLKRFQYNMSWKQKLNTKIDIPKIIDMSPFAPYSNEAYSSRKNVYSIFGICHHF 414
Query: 305 GFSPDSGHYYAYIKDAIGRWYCCNDSYV-SVSTLQEVLSEKVYILFF 350
G S SGHY A IK GRW+ CNDS V ++T SE Y+LF+
Sbjct: 415 G-SLSSGHYTAEIKTPNGRWFNCNDSIVEQIATPNFDASESAYLLFY 460
>gi|119623000|gb|EAX02595.1| hCG28655 [Homo sapiens]
Length = 556
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 178 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 237
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 238 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 286
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 287 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 335
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 336 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGESHVSGTTTLTD 395
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 396 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 455
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 456 YVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 514
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 515 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 548
>gi|242040109|ref|XP_002467449.1| hypothetical protein SORBIDRAFT_01g028253 [Sorghum bicolor]
gi|241921303|gb|EER94447.1| hypothetical protein SORBIDRAFT_01g028253 [Sorghum bicolor]
Length = 306
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 156/325 (48%), Gaps = 29/325 (8%)
Query: 35 SCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSL 94
+C+LN +LQC+ +T PL K H C + + C +C L++ + S+
Sbjct: 1 TCFLNCILQCMVHTVPLVLKLRKTDHPDPCPRASIGF---------CCYCSLKQHVNESI 51
Query: 95 SVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSS 154
+ + P + L+ + FK G Q+DA EFLR ++D KL
Sbjct: 52 RLSGSSFYPEIFINRLKSISSDFKSGVQQDAQEFLRCLLD----------KLDEDSIAPR 101
Query: 155 GGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAM 214
T G SVVKEIF G L+SQ++C C S+K + +D+SLD+ +L +A+
Sbjct: 102 SSEESSTTKEG--SVVKEIFRGCLKSQLRCPECDRCSDKSEPFLDLSLDLNMVETLMDAL 159
Query: 215 QKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAF 274
Q F E++ + CD CK VS K I Q+P +LVI LKRF KI + +
Sbjct: 160 QSFTNTELI---KDFMCDGCKSRVSMEKHFKIEQAPEVLVIHLKRFTNS-ESKIWDKVKY 215
Query: 275 EEVLVLSSFMCKASQDPQPEYK--LFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYV 332
L ++SFM +S D +K L+G + H G + SGHY YI+ + WY ND V
Sbjct: 216 PLELDINSFM-SSSDDVSCSFKYDLYGVVEHLG-AYGSGHYVCYIRSSEADWYKFNDDKV 273
Query: 333 SVSTLQEVLSEKVYILFFIRANQRP 357
++ L Y+LF+++ P
Sbjct: 274 YQCSVDSALENAAYLLFYVKQGSSP 298
>gi|363737872|ref|XP_413755.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gallus gallus]
Length = 520
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 170/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 160 GLRNLGNTCFMNAILQSLS---NIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 216
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 217 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 273
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG SS ING S+VV IFGG LQ++V CL CG
Sbjct: 274 -----LELQGGFNGVSRSVILQENSSLTASSKCCINGASTVVTAIFGGILQNEVNCLICG 328
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + C+L++ ++ F E LD Y C C
Sbjct: 329 TESRKFDPFLDLSLDIPSQFRNKRTKNQENGPMCTLRDCLRSFTDLEELDETELYMCHKC 388
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 389 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 447
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ + V+ K YIL
Sbjct: 448 GPESCLYDLAAVVVHHGSGVGSGHYTAYAAHE-GRWFHFNDSTVTLTDEETVVKAKAYIL 506
Query: 349 FFI 351
F++
Sbjct: 507 FYV 509
>gi|158293588|ref|XP_314931.4| AGAP008805-PA [Anopheles gambiae str. PEST]
gi|157016781|gb|EAA10095.4| AGAP008805-PA [Anopheles gambiae str. PEST]
Length = 634
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 177/395 (44%), Gaps = 58/395 (14%)
Query: 17 SEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANF-----CLKLQHSSLCKQLTGDS 71
+ KRK +GLRNLGN+C++NSVLQ L+ + + L+++H KQ S
Sbjct: 222 TAKRKSQRRVVGLRNLGNTCFMNSVLQSLSNIQEFSCYFNTMPALEMKH----KQKAYHS 277
Query: 72 ALDAERKRECPFCILE-KRIVRSLSVDLTLDAPAKIQSCLRIF----AEHFKCGRQEDAH 126
E + F + E ++++ +LS A CL + F+ RQ DAH
Sbjct: 278 RSMKETMDDV-FVVEELRKVLLNLSQGGDGSKSAISPECLFLVIWKVVPQFRGHRQHDAH 336
Query: 127 EFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGS--------SVVKEIFGGAL 178
EFLRY++D H ++ GG SG ++G S S+V +FGG L
Sbjct: 337 EFLRYMLDRLHTELQQVSFPVELGGPKSGEHKNPYNVSGLSHLQAKGRNSIVTNVFGGVL 396
Query: 179 QSQVKCLACGAESNKVDEIMDISLDILNS-----------------------CSLKEAMQ 215
QS+V+CL CG ES K D +D+SLDI C + + +
Sbjct: 397 QSEVRCLICGMESKKHDPFLDLSLDIPEKYYSKEHGADGTNGADGGGGAAPVCHISDCLS 456
Query: 216 KFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIA 273
F + E L Y C++CK + K+ I + PN+L + +KRF + KID IA
Sbjct: 457 SFTEVEELAETELYYCNSCKCKQKSTKRFWIRRLPNVLCLHIKRFRWNNFYRTKIDLRIA 516
Query: 274 FE-EVLVLSSFM------CKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
F L +S F+ + S Y L IVH G GHY ++ + G W
Sbjct: 517 FPINALDMSQFVLNNGPETRRSNSSCNIYDLAAVIVHHGNGSSCGHYTSFAINN-GVWMH 575
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSAN 361
ND V + V K YILF+I+ + P +AN
Sbjct: 576 FNDHTVKEVSSTAVAECKPYILFYIKRD--PTNAN 608
>gi|354504731|ref|XP_003514427.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Cricetulus griseus]
gi|354504733|ref|XP_003514428.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
[Cricetulus griseus]
gi|354504735|ref|XP_003514429.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 3
[Cricetulus griseus]
Length = 613
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 163/340 (47%), Gaps = 28/340 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L +AL E F L
Sbjct: 276 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSNAHTALMEE------FAKL 329
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL--- 143
+ I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN R+
Sbjct: 330 IQTIWTSSPNDVV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVR 387
Query: 144 -----KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ L G + + S + ++F G L+S + C CG S D
Sbjct: 388 PKPSPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFW 447
Query: 199 DISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
D+SL I +L + M+ F + +VLDG+ K C C+ K+ S+ + P ILV
Sbjct: 448 DLSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCYRCRARKRCIKKFSVQRFPKILV 507
Query: 255 IQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
+ LKRF I K+ + F L L F + + Y L+ HSG + G
Sbjct: 508 LHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMGG 564
Query: 312 HYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HY AY + + G W+ NDS V+ + +V + Y+LF+
Sbjct: 565 HYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 604
>gi|431914524|gb|ELK15774.1| Ubiquitin carboxyl-terminal hydrolase 22 [Pteropus alecto]
Length = 525
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 147 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 206
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 207 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 255
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 256 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 304
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 305 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGESHVSGTTTLTD 364
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 365 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 424
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 425 YVSFPLELDMTPFMASSKESRMNGQYQQPADSLNNDNKYSLFAVVNHQG-TLESGHYTSF 483
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 484 IRQHKDQWFKCDDAIITKASIEDVLDSEGYLLFY 517
>gi|5689463|dbj|BAA83015.1| KIAA1063 protein [Homo sapiens]
Length = 593
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 160/364 (43%), Gaps = 64/364 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + + C C +
Sbjct: 245 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRC-----------EMQSPSSCLVCEMS 293
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + P K+ + A H Q+DAHEFL +D H C
Sbjct: 294 SLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC------- 346
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C C S +D DISLD+ S
Sbjct: 347 -KG---DDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGS 402
Query: 208 -------------------------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
+L + +++F +PE L + K KC C + K
Sbjct: 403 STPFWPLSPGSEGNVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTK 462
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKAS------QDPQP- 293
Q+++ + P + LKRFE KI ++F L ++ FM + Q QP
Sbjct: 463 QLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPT 522
Query: 294 -------EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 346
+Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y
Sbjct: 523 DSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGY 581
Query: 347 ILFF 350
+LF+
Sbjct: 582 LLFY 585
>gi|403275468|ref|XP_003929464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Saimiri
boliviensis boliviensis]
Length = 555
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 160/364 (43%), Gaps = 64/364 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + + C C +
Sbjct: 207 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRC-----------EMQSPSSCLVCEMS 255
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + P K+ + A H Q+DAHEFL +D H C
Sbjct: 256 SLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC------- 308
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD---- 203
KG G N + ++ +IF G LQS V C C S +D DISLD
Sbjct: 309 -KG---DDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGS 364
Query: 204 ---------------------ILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
+ + +L + +++F +PE L + K KC C + K
Sbjct: 365 STPFWPLSPGSEGNVVNGESHVAGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTK 424
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKA------SQDPQP- 293
Q+++ + P + LKRFE KI ++F L ++ FM + Q QP
Sbjct: 425 QLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPT 484
Query: 294 -------EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 346
+Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y
Sbjct: 485 DSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGY 543
Query: 347 ILFF 350
+LF+
Sbjct: 544 LLFY 547
>gi|426238935|ref|XP_004013392.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Ovis aries]
Length = 606
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 159/364 (43%), Gaps = 64/364 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + + C C +
Sbjct: 258 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRC-----------EMQSPSSCLVCEMS 306
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + P K+ + A H Q+DAHEFL +D H C
Sbjct: 307 SLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC------- 359
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C C S +D DISLD+ S
Sbjct: 360 -KG---DDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGS 415
Query: 208 -------------------------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
+L + +++F +PE L + K KC C + K
Sbjct: 416 STPFWPLSPGSESSVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTK 475
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKA------SQDPQP- 293
Q+++ + P + LKRFE KI ++F L ++ FM + Q QP
Sbjct: 476 QLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPT 535
Query: 294 -------EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 346
+Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++ +VL + Y
Sbjct: 536 DSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQHKDQWFKCDDAIITKASIADVLDSEGY 594
Query: 347 ILFF 350
+LF+
Sbjct: 595 LLFY 598
>gi|355568328|gb|EHH24609.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Macaca mulatta]
Length = 469
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 91 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 150
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 151 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 199
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 200 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 248
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 249 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGESHVSGTTTLTD 308
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 309 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 368
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 369 YVSFPLELDMTPFMASSKESRMNGQSQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 427
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 428 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 461
>gi|355727980|gb|AES09374.1| ubiquitin specific peptidase 3 [Mustela putorius furo]
Length = 472
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 169/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 112 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 168
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 169 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 225
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ ING S+VV IFGG LQ++V CL CG
Sbjct: 226 -----LELQGGFNGVSRSAILQENSALSASNKCCINGASTVVTAIFGGILQNEVNCLICG 280
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 281 TESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKC 340
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 341 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 399
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ V+ K YIL
Sbjct: 400 GPEHCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEDTVVKAKAYIL 458
Query: 349 FFI 351
F++
Sbjct: 459 FYV 461
>gi|348560267|ref|XP_003465935.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cavia
porcellus]
Length = 525
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 147 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 206
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 207 DRHHC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 255
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 256 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 304
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 305 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGESHASGTTTLTD 364
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 365 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 424
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 425 YVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 483
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 484 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 517
>gi|117558705|gb|AAI26899.1| USP22 protein [Homo sapiens]
Length = 513
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 135 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 194
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 195 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 243
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 244 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 292
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 293 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGESHVSGTTTLTD 352
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 353 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 412
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 413 YVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 471
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 472 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 505
>gi|356563930|ref|XP_003550210.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine
max]
Length = 555
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 180/392 (45%), Gaps = 80/392 (20%)
Query: 20 RKRGGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAE 76
R++ P+GLR NLG++C++NSVLQ L PP ++ L+G L+A
Sbjct: 171 REKSCYPVGLRGLNNLGSTCFMNSVLQVLLNAPPFRDY-----------FLSGGHRLEAC 219
Query: 77 RKRE------CPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLR 130
R C C + + S D + +PA+ + + C Q+DAHEF
Sbjct: 220 HHRRTADLMCCLLCDVNAIFSAAYSGDRSPYSPAQFLYSWWQHSANLACYEQQDAHEFFI 279
Query: 131 YVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAE 190
++DA H +K + GS G G + ++F G L+S V C+ACG
Sbjct: 280 SMLDAIH------EKESKTRNGSKGNGDC-------QCIAHKVFYGLLRSDVTCMACGFT 326
Query: 191 SNKVDEIMDISLDILNSCSLKEAMQK-------------------FFQPEVLDGNNKYKC 231
S D +DISL++ + S E +K F +PE L + K C
Sbjct: 327 STTYDPCVDISLNLDTNVSSTEKGKKLTKQNEDGSMSTLFGCLDLFTRPEKLGSDQKLYC 386
Query: 232 DNCKKLVSARKQMSILQSPNILVIQLKRFEGIF----GGKIDKAIAFEEVLVLSSFMCKA 287
NC++ + KQMSI + P +L + +KRFE F KID+ + F L +S ++ +
Sbjct: 387 RNCRERQDSLKQMSIRKLPLVLSLHVKRFEHSFVKKSSRKIDRYLHFPFSLDMSPYLSSS 446
Query: 288 ----------------SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSY 331
D E+++F + HSG + +SGHY ++++ +WY C+D++
Sbjct: 447 ILRARYGNRIFNFGGDQSDMFSEFEIFAVVTHSG-TLESGHYVSFVR-LRNQWYRCDDAW 504
Query: 332 VSVSTLQEVLSEKVYILFFI------RANQRP 357
++V V + + Y++F++ +AN+ P
Sbjct: 505 ITVVDEATVRASQCYMIFYVQKLQHNKANEDP 536
>gi|359319450|ref|XP_851968.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Canis lupus
familiaris]
Length = 474
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 96 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 155
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 156 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 204
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 205 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 253
Query: 178 LQSQVKCLACGAESNKVDEIMDISLD-------------------------ILNSCSLKE 212
LQS V C C S +D DISLD + + +L +
Sbjct: 254 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGESHVAGTTTLTD 313
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 314 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 373
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 374 YVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 432
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 433 IRQHKDQWFKCDDAIITKASIEDVLDSEGYLLFY 466
>gi|307177521|gb|EFN66632.1| Ubiquitin carboxyl-terminal hydrolase 2 [Camponotus floridanus]
Length = 762
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 116/350 (33%), Positives = 176/350 (50%), Gaps = 28/350 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRN+GN+C++NSV+QCL+ T PL + L Q+ L T S++ + I E
Sbjct: 424 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQY--LADINTTTSSMKGALIKAFSQVIHE 481
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL-KKL 146
+ + D ++ A ++S ++ FA F Q+DA EFLRY+++ H R+ KL
Sbjct: 482 ---LWEVGGDHVVNTTA-LKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTTKL 537
Query: 147 RRKGGG--------SSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
G + S++ ++F G L+S + C +C S +D
Sbjct: 538 PPIHGDIPDSYTDMQKAVESWKRYLRSEDSMIVDVFVGQLRSSLHCTSCDHVSVTLDPFW 597
Query: 199 DISLDI---LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVI 255
D+SL I + L + ++ F + EVLDG+ K C C+ K SI + P ILVI
Sbjct: 598 DLSLPIPGRSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVI 657
Query: 256 QLKRFEGI--FGGKIDKAIAFEEV-LVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGH 312
LKRF + F GK++ + F L LS+F A + P Y L+G HSG + SGH
Sbjct: 658 HLKRFSPMERFRGKLNVMVDFPLTGLDLSAF--AAPRVPGCTYNLYGVANHSG-TTYSGH 714
Query: 313 YYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSAN 361
Y AY K G W+ NDS VSV + + V+S + Y+LF+ Q+P S++
Sbjct: 715 YTAYCKHPYSGEWHEYNDSRVSVVSSRSVVSSEAYVLFY---EQQPHSSH 761
>gi|84569929|gb|AAI10500.1| USP22 protein [Homo sapiens]
Length = 512
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 134 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 193
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 194 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 242
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 243 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 291
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 292 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGESHVSGTTTLTD 351
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 352 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 411
Query: 271 AIAFEEVLVLSSFMCKA------SQDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 412 YVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 470
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 471 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 504
>gi|432092259|gb|ELK24883.1| Ubiquitin carboxyl-terminal hydrolase 3 [Myotis davidii]
Length = 449
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 169/368 (45%), Gaps = 52/368 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 89 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 145
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 146 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 202
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ ING S+VV IFGG LQ++V CL CG
Sbjct: 203 -----LELQGGFNGVSCSPILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICG 257
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 258 TESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKC 317
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 318 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 376
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ V+ K YIL
Sbjct: 377 GPENCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTEEDTVVKAKAYIL 435
Query: 349 FFIRANQR 356
F+ R
Sbjct: 436 FYAERQAR 443
>gi|225709338|gb|ACO10515.1| Ubiquitin carboxyl-terminal hydrolase 22 [Caligus rogercresseyi]
Length = 484
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 167/382 (43%), Gaps = 69/382 (18%)
Query: 9 MSWQPS-----LLSEKRKRGG----PPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCL 56
SW PS L + +KR G +GLR NLGN+C+++ ++Q L +TP L ++ L
Sbjct: 124 FSWSPSQEDISTLQKNKKRKGFGHQSTIGLRGLINLGNTCFMSCIIQSLIHTPLLRDYFL 183
Query: 57 KLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEH 116
+H + + K +C C + + S P + A H
Sbjct: 184 SDRHRCM-----------FQGKNDCMVCEVSRLFQEFYSGSKVPLVPHVLLHMTWTHAHH 232
Query: 117 FKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSS--VVKEIF 174
Q+DAHEF +D H + L K T+N + +V IF
Sbjct: 233 LAGYEQQDAHEFFIATLDLLH------RHLIHK-----------TTVNPANCDCIVDTIF 275
Query: 175 GGALQSQVKCLACGAESNKVDEIMDISLDI-----------------LNSCSLKEAMQKF 217
G LQS V C C S +D DISLD+ + SL +++F
Sbjct: 276 TGKLQSDVVCQNCKGVSTTIDPFWDISLDLPAATPSSSNSSSSSSSSNHVISLHNCLERF 335
Query: 218 FQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE 275
+PE L + K KC NC+ + KQ+++ + P + LKRFE F KI IAF
Sbjct: 336 TKPEHLGSSAKIKCSNCQTYQESTKQLTMKKLPIVASFHLKRFEHSSRFHKKISTRIAFP 395
Query: 276 EVLVLSSFMCKASQDPQP-------EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCN 328
E+L +S F+ + Y LF I H+G + ++GHY ++++ RWY CN
Sbjct: 396 EILDMSPFVSHIRNNSASPVNSGSYTYTLFAVINHTG-NIEAGHYTSFVRQHRDRWYRCN 454
Query: 329 DSYVSVSTLQEVLSEKVYILFF 350
D + + L +VL + Y+LF+
Sbjct: 455 DHQIVPADLSDVLGSEGYLLFY 476
>gi|397466402|ref|XP_003804951.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Pan paniscus]
Length = 513
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 135 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 194
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 195 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 243
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 244 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 292
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 293 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGESHVSGTTTLTD 352
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 353 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 412
Query: 271 AIAFEEVLVLSSFMCKA------SQDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 413 YVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 471
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 472 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 505
>gi|432956682|ref|XP_004085735.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like, partial
[Oryzias latipes]
Length = 421
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 170/394 (43%), Gaps = 78/394 (19%)
Query: 10 SWQPSLLSEKRKRGGP---------PLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
SW+P+ + R P +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 45 SWEPTRREVELLRHNPKRRRITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 104
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H C+ + C C + + S + P ++ + A H
Sbjct: 105 DRHK--CEMASSS----------CLVCEMSQLFQEFYSGHRSPHVPFRLLHLVWTHARHL 152
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C G N + ++ +IF G
Sbjct: 153 AGYEQQDAHEFLIAALDVLHRHC------------KDDSGKRTSNPNHCNCIIDQIFTGG 200
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDI------------------LN-------SCSLKE 212
LQS V C C S +D DISLD+ LN + +L +
Sbjct: 201 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPEGEVSALNRETPGSGATALTD 260
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 261 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 320
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q+ Q Y LF + H G + +SGHY +
Sbjct: 321 YVSFPLELDMTPFMASSKEKRMNGQNQQTADAFSSDNRYSLFAVVNHQG-TLESGHYTTF 379
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ ++L+EVL + Y+LF+
Sbjct: 380 IRQHKDQWFKCDDAVITKASLEEVLDSEGYLLFY 413
>gi|345795043|ref|XP_865326.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Canis
lupus familiaris]
Length = 476
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 169/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 116 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 172
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 173 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 229
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ ING S+VV IFGG LQ++V CL CG
Sbjct: 230 -----LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICG 284
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 285 TESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKC 344
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 345 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 403
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ V+ K YIL
Sbjct: 404 GPEHCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEDTVVKAKAYIL 462
Query: 349 FFI 351
F++
Sbjct: 463 FYV 465
>gi|89269005|emb|CAJ81533.1| ubiquitin specific protease 3 [Xenopus (Silurana) tropicalis]
Length = 522
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 173/361 (47%), Gaps = 48/361 (13%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 162 GLRNLGNTCFMNAILQSLS---NIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDVNV 218
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 219 SLVEEFRKTLCALWQGNQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 275
Query: 141 LRLKKLRRKGGGSSGG----------GGGGETINGGSSVVKEIFGGALQSQVKCLACGAE 190
+L+ + GSS ING S+VV +FGG LQ++V CL CG E
Sbjct: 276 ---LELQGEFDGSSHSVLSQANCSRSACNKCCINGASTVVTSVFGGVLQNEVNCLICGTE 332
Query: 191 SNKVDEIMDISLDILN--------------SCSLKEAMQKFFQPEVLDGNNKYKCDNCKK 236
S K D +D+SLDI + +C+L++ ++ F E LD Y C CKK
Sbjct: 333 SRKFDPFLDLSLDIPSQFRNKRCKNQENGPTCTLRDCLRSFTDLEELDETELYTCLKCKK 392
Query: 237 LVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQP 293
+ K+ I + P +L + LKRF K+D + F L + SF+ + ++ P
Sbjct: 393 KQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVDFPLRGLDMKSFLLEP-ENIGP 451
Query: 294 E---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
E Y L +VH G SGHY AY GRW+ NDS V+++ + V K YILF+
Sbjct: 452 ESCLYDLAAVVVHHGSGVGSGHYTAYATHK-GRWFHFNDSTVTLTEEETVAKAKAYILFY 510
Query: 351 I 351
+
Sbjct: 511 V 511
>gi|380784219|gb|AFE63985.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
gi|380784221|gb|AFE63986.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
gi|383416981|gb|AFH31704.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
gi|383416983|gb|AFH31705.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
gi|384939714|gb|AFI33462.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
gi|384939716|gb|AFI33463.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
Length = 525
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 147 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 206
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 207 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 255
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 256 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 304
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 305 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGESHVSGTTTLTD 364
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 365 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 424
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 425 YVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 483
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 484 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 517
>gi|410051732|ref|XP_003953155.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 22 [Pan troglodytes]
Length = 513
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 135 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 194
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 195 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 243
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 244 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 292
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 293 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGESHMSGTTTLTD 352
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 353 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 412
Query: 271 AIAFEEVLVLSSFMCKA------SQDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 413 YVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 471
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 472 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 505
>gi|302784140|ref|XP_002973842.1| hypothetical protein SELMODRAFT_100312 [Selaginella moellendorffii]
gi|300158174|gb|EFJ24797.1| hypothetical protein SELMODRAFT_100312 [Selaginella moellendorffii]
Length = 572
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 181/398 (45%), Gaps = 85/398 (21%)
Query: 11 WQPS----LLSEKRKRGGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSL 63
W+PS L+ E RG PLGLR N+G++C++NSVLQ L +TPPL ++ L H+
Sbjct: 165 WEPSSKDPLVLE---RGAAPLGLRGLTNMGSTCFMNSVLQALLHTPPLRSYFLGHCHNKA 221
Query: 64 CKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIF---------- 113
A + + C C ++ + S D T +PA+ +F
Sbjct: 222 -----------ACQSKVCLGCDMDDMFAAAFSGDRTPYSPAQFLYRRYLFLFSFLNSWWQ 270
Query: 114 -AEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKE 172
A + Q+DAH+F ++ H + +LR+ G E +V
Sbjct: 271 HAANLAGYEQQDAHDFFISAVEGIHANSQQ-PELRK--------GNDAEC----RCIVHR 317
Query: 173 IFGGALQSQVKCLACGAESNKVDEIMDISLDI----------LNSCSLKEAMQKFFQPEV 222
+F G L+S V C ACG S K D +DISLD+ +S +L + +F +PE
Sbjct: 318 VFSGLLRSDVTCTACGFTSTKNDPCVDISLDLESTALEKQIYASSSTLLGCLDRFTRPER 377
Query: 223 LDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVL 280
L N ++ C++C+ A KQMS+ + P +L +KRFE K+D + F L +
Sbjct: 378 LGSNERFFCESCQSRQEAVKQMSVRKLPVVLCFHVKRFEHSAKNYRKVDTYVQFPLSLNM 437
Query: 281 SSFMCKA--------------------------SQDPQPEYKLFGTIVHSGFSPDSGHYY 314
+ ++ + S P E++LF + HSG D GHY
Sbjct: 438 ACYLSSSIARLRHGNRLIFVEGKGELGGDNDSGSTSPSSEFELFAVVSHSG-KLDGGHYV 496
Query: 315 AYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
AY++ G WY C+D++++ V + + Y+L++++
Sbjct: 497 AYLRLG-GEWYKCDDAWITRVGESVVRATQAYMLYYVQ 533
>gi|449443277|ref|XP_004139406.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
sativus]
gi|449518463|ref|XP_004166261.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
sativus]
Length = 602
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 171/389 (43%), Gaps = 78/389 (20%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSS-LCKQLTGDSALDA--------ERK 78
GL NLGN+C++NSVLQ L +TPPL NF L +H+ C++ S + + +
Sbjct: 214 GLNNLGNTCFMNSVLQALLHTPPLRNFFLSDRHNRYFCQRNVNGSNVSSNVNDGNGSKNS 273
Query: 79 RECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHN 138
R C C L+ S D T +PAK A + Q+DAHEF +++ H
Sbjct: 274 RICLACDLDAMFSAVFSGDRTPYSPAKFLFSWWQHAANLASYEQQDAHEFFISILEGIHE 333
Query: 139 TCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
++ K RRK NG + +F G L+S V C+ACG S D +
Sbjct: 334 ---KVDKDRRKPYSQG---------NGDCCIAHRVFSGILRSDVMCMACGFTSTTYDPCV 381
Query: 199 DISLDI-------------------------LNSC------SLKEAMQKFFQPEVLDGNN 227
DISLD+ +NS SL + +F +PE L +
Sbjct: 382 DISLDLEPNLGGSAKMAAARSNLPCNGEADCMNSSQNQRLSSLVGCLDQFTRPEKLGSDQ 441
Query: 228 KYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI----FGGKIDKAIAFEEVLVLSSF 283
K+ C C+ + KQMSI + P + +KRFE K+D+ + F L ++ +
Sbjct: 442 KFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKVDRYLQFPFSLDMAPY 501
Query: 284 MCKA--------------------SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR 323
+ + + E++LF I H G D+GHY Y++ + +
Sbjct: 502 LSSSILRSRFGNRIFPFDGDELDGCNEMSSEFELFAVITHKG-KLDAGHYVTYLRLS-NQ 559
Query: 324 WYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
WY C+D++++ V + + Y++F+++
Sbjct: 560 WYKCDDAWITQVNENIVRAAQGYMMFYVQ 588
>gi|410980119|ref|XP_003996426.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Felis catus]
Length = 470
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 92 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 151
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 152 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 200
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 201 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 249
Query: 178 LQSQVKCLACGAESNKVDEIMDISLD-------------------------ILNSCSLKE 212
LQS V C C S +D DISLD + + +L +
Sbjct: 250 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGESHVAGTTTLTD 309
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 310 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 369
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 370 YVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 428
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 429 IRQHKDQWFKCDDAIITKASIEDVLDSEGYLLFY 462
>gi|410902430|ref|XP_003964697.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
1 [Takifugu rubripes]
Length = 527
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 176/398 (44%), Gaps = 74/398 (18%)
Query: 6 ELQMSWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLAN 53
E +W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +
Sbjct: 143 EKYTTWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRD 202
Query: 54 FCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIF 113
F L +H C+ + C C + + S + P ++ +
Sbjct: 203 FFLSDRHK--CEM----------QSNSCLVCEMSQLFQEFYSGHRSPHIPFRLLHLVWTH 250
Query: 114 AEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEI 173
A H Q+DAHEFL +D H C KG + G N + ++ +I
Sbjct: 251 ARHLAGYEQQDAHEFLIAALDVLHRHC--------KGDTINDNGKKANNPNHCNCIIDQI 302
Query: 174 FGGALQSQVKCLACGAESNKVDEIMDISLDI------------------LN-------SC 208
F G LQS V C C S +D DISLD+ +N S
Sbjct: 303 FTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGGDGGTMNGESHLSGST 362
Query: 209 SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGG 266
+L + +++F +PE L + K KC C + KQ+++ + P + LKRFE
Sbjct: 363 TLTDCLRRFTRPEHLGSSAKIKCGGCHSYQESTKQLTLKKLPIVACFHLKRFEHSAKLRR 422
Query: 267 KIDKAIAFEEVLVLSSFMCKASQ--------------DPQPEYKLFGTIVHSGFSPDSGH 312
KI ++F L ++ FM + + + +Y LF + H G + +SGH
Sbjct: 423 KITTYVSFPLELDMTPFMASSKESRMNGQYQQTVEVLNNDNKYSLFAVVNHQG-TLESGH 481
Query: 313 YYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
Y ++I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 482 YTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 519
>gi|327412316|ref|NP_001192175.1| ubiquitin specific peptidase 22 [Xenopus (Silurana) tropicalis]
Length = 572
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 163/364 (44%), Gaps = 64/364 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H C+ + +S C C +
Sbjct: 224 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHK--CEMQSPNS---------CLVCEMS 272
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + P ++ + A H Q+DAHEFL +D H C
Sbjct: 273 TLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC------- 325
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C C S +D DISLD+ S
Sbjct: 326 -KG---DDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGS 381
Query: 208 -------------------------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
+L + +++F +PE L + K KC C + K
Sbjct: 382 STPFWPLSPGSDSAVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTK 441
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKAS------QDPQP- 293
Q+++ + P + LKRFE KI ++F L ++ FM + Q QP
Sbjct: 442 QLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPWELDMTPFMASSKESRMNGQYQQPS 501
Query: 294 -------EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 346
+Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y
Sbjct: 502 DSLHNDNKYSLFAVVNHQG-TLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGY 560
Query: 347 ILFF 350
+LF+
Sbjct: 561 LLFY 564
>gi|153792416|ref|NP_001093229.1| ubiquitin carboxyl-terminal hydrolase 3 [Equus caballus]
gi|148529824|gb|ABQ82144.1| ubiquitin specific peptidase 3 [Equus caballus]
Length = 520
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 169/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 160 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 216
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 217 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 273
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ ING S+VV IFGG LQ++V CL CG
Sbjct: 274 -----LELQGGFNGVSRSAILQENSTLSPSNKCCINGASTVVTAIFGGILQNEVNCLICG 328
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 329 TESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKC 388
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 389 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 447
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ V+ K YIL
Sbjct: 448 GPENCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEDTVVKAKAYIL 506
Query: 349 FFI 351
F++
Sbjct: 507 FYV 509
>gi|426349090|ref|XP_004042152.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Gorilla
gorilla gorilla]
Length = 525
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 147 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 206
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 207 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 255
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 256 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 304
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 305 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGESHVSGTTTLTD 364
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 365 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 424
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 425 YVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 483
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 484 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 517
>gi|410212034|gb|JAA03236.1| ubiquitin specific peptidase 22 [Pan troglodytes]
gi|410262710|gb|JAA19321.1| ubiquitin specific peptidase 22 [Pan troglodytes]
gi|410299182|gb|JAA28191.1| ubiquitin specific peptidase 22 [Pan troglodytes]
gi|410356232|gb|JAA44523.1| ubiquitin specific peptidase 22 [Pan troglodytes]
Length = 525
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 147 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 206
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 207 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 255
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 256 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 304
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 305 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGESHMSGTTTLTD 364
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 365 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 424
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 425 YVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 483
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 484 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 517
>gi|403298210|ref|XP_003939924.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Saimiri
boliviensis boliviensis]
Length = 498
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 170/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 138 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 194
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 195 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 251
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ ING S+VV IFGG LQ++V CL CG
Sbjct: 252 -----LELQGGFNGVSRSTILQENSALSASNKCCINGASTVVTAIFGGILQNEVNCLICG 306
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 307 TESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKC 366
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 367 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 425
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
P+ Y L +VH G SGHY AY GRW+ NDS V+++ + V+ K YIL
Sbjct: 426 GPDSCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEETVVKAKAYIL 484
Query: 349 FFI 351
F++
Sbjct: 485 FYV 487
>gi|322801296|gb|EFZ21983.1| hypothetical protein SINV_10772 [Solenopsis invicta]
Length = 886
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/339 (33%), Positives = 170/339 (50%), Gaps = 25/339 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRN+GN+C++NSV+QCL+ T PL + L Q+ L T S++ + I E
Sbjct: 548 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQY--LADINTTTSSMKGALIKAFSQVIHE 605
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL-KKL 146
+ + D ++ A ++S ++ FA F Q+DA EFLRY+++ H R+ KL
Sbjct: 606 ---LWEVGGDHVVNTTA-LKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTTKL 661
Query: 147 RRKGGG--------SSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
G + S + ++F G L+S ++C +C S +D
Sbjct: 662 PPIHGDIPDSYTDMQKAVESWKRYLRSEDSTIVDVFVGQLRSSLRCTSCDHVSVTLDPFW 721
Query: 199 DISLDI---LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVI 255
D+SL I + L + ++ F + EVLDG+ K C C+ K SI + P ILVI
Sbjct: 722 DLSLPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVI 781
Query: 256 QLKRFEGI--FGGKIDKAIAFEEV-LVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGH 312
LKRF + F GK++ + F L LS+F A + P Y L+G HSG + SGH
Sbjct: 782 HLKRFSPMERFRGKLNVMVDFPLTGLDLSAFA--APRVPGCTYNLYGVANHSG-TTYSGH 838
Query: 313 YYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
Y AY K G W+ NDS VSV + + V+S + Y+LF+
Sbjct: 839 YTAYCKHPYSGEWHEYNDSRVSVVSSRSVVSSEAYVLFY 877
>gi|150010639|ref|NP_056091.1| ubiquitin carboxyl-terminal hydrolase 22 [Homo sapiens]
gi|78103328|sp|Q9UPT9.2|UBP22_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22; AltName:
Full=Deubiquitinating enzyme 22; AltName: Full=Ubiquitin
thioesterase 22; AltName:
Full=Ubiquitin-specific-processing protease 22
gi|307684440|dbj|BAJ20260.1| ubiquitin specific peptidase 22 [synthetic construct]
Length = 525
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 147 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 206
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 207 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 255
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 256 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 304
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 305 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGESHVSGTTTLTD 364
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 365 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 424
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 425 YVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 483
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 484 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 517
>gi|148238088|ref|NP_001090549.1| ubiquitin thiolesterase 3 [Xenopus laevis]
gi|117558253|gb|AAI26024.1| LOC100036785 protein [Xenopus laevis]
Length = 522
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 173/361 (47%), Gaps = 48/361 (13%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 162 GLRNLGNTCFMNAILQSLS---NIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDVNV 218
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 219 SLVEEFRKTLCALWQGNQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 275
Query: 141 LRLKKLRRKGGGSSGGGGGGET----------INGGSSVVKEIFGGALQSQVKCLACGAE 190
+L+ + GSS ING S+VV +FGG LQ++V CL CG E
Sbjct: 276 ---LELQGEFDGSSHSVLSQANCSRSVSNKCCINGASTVVTSVFGGVLQNEVNCLICGTE 332
Query: 191 SNKVDEIMDISLDILN--------------SCSLKEAMQKFFQPEVLDGNNKYKCDNCKK 236
S K D +D+SLDI + +C+L++ ++ F E LD Y C CKK
Sbjct: 333 SRKFDPFLDLSLDIPSQFRNKRCKNQENGPTCTLRDCLRSFTDLEELDETELYTCLKCKK 392
Query: 237 LVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQP 293
+ K+ I + P +L + LKRF K+D + F L + SF+ + ++ P
Sbjct: 393 KQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVDFPLRGLDMKSFLLEP-ENIGP 451
Query: 294 E---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
E Y L +VH G SGHY AY GRW+ NDS V+++ + V K YILF+
Sbjct: 452 ESCLYDLEAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTEEETVAKAKAYILFY 510
Query: 351 I 351
+
Sbjct: 511 V 511
>gi|74145360|dbj|BAE36137.1| unnamed protein product [Mus musculus]
Length = 525
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 147 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 206
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 207 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 255
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 256 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 304
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 305 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGESHASGTTTLTD 364
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 365 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 424
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 425 YVSFPLELDMTPFMASSKESRMNGQYQQPLDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 483
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 484 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 517
>gi|70794797|ref|NP_001020595.1| ubiquitin carboxyl-terminal hydrolase 3 [Rattus norvegicus]
gi|68480670|gb|AAY97907.1| ubiquitin specific protease 3 [Rattus norvegicus]
Length = 520
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 171/375 (45%), Gaps = 66/375 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFC--------LKLQHSSLCKQLT------GDSAL 73
GLRNLGN+C++N++LQ L+ + FC ++L++ + T GDS +
Sbjct: 160 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDSNV 216
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
+ C L + + S + KI +F+ RQ+DAHEF+RY++
Sbjct: 217 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMP-------NFRGYRQQDAHEFMRYLL 269
Query: 134 DACHNTCLRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQ 181
D H L +GG S+ ING S+VV IFGG LQ++
Sbjct: 270 DHLH--------LELQGGFNGVSRSAILQENSTLSANNKCCINGASTVVTTIFGGILQNE 321
Query: 182 VKCLACGAESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNN 227
V CL CG ES K D +D+SLDI + CSL++ ++ F E LD
Sbjct: 322 VNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETE 381
Query: 228 KYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFM 284
Y C CKK + K+ I + P L + LKRF K+D + F L + ++
Sbjct: 382 LYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRNKVDTYVQFPLRGLDMKCYL 441
Query: 285 CKASQDPQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVL 341
+ ++ P+ Y L VH G SGHY AY GRW+ NDS V+V+ + V
Sbjct: 442 LEP-ENSGPDSCLYDLAAVFVHHGSGVGSGHYTAYAVHE-GRWFHFNDSTVTVTDEETVG 499
Query: 342 SEKVYILFFIRANQR 356
K YILF++ R
Sbjct: 500 KAKAYILFYVERQAR 514
>gi|110625685|ref|NP_001004143.2| ubiquitin carboxyl-terminal hydrolase 22 [Mus musculus]
gi|78103329|sp|Q5DU02.2|UBP22_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22; AltName:
Full=Deubiquitinating enzyme 22; AltName: Full=Ubiquitin
thioesterase 22; AltName:
Full=Ubiquitin-specific-processing protease 22
gi|74196250|dbj|BAE33026.1| unnamed protein product [Mus musculus]
Length = 525
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 147 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 206
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 207 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 255
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 256 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 304
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 305 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGESHASGTTTLTD 364
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 365 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 424
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 425 YVSFPLELDMTPFMASSKESRMNGQYQQPLDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 483
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 484 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 517
>gi|402899046|ref|XP_003912516.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Papio anubis]
Length = 525
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 147 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 206
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 207 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 255
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 256 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 304
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 305 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGESHMSGTTTLTD 364
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 365 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 424
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 425 YVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 483
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 484 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 517
>gi|449662479|ref|XP_002167244.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Hydra
magnipapillata]
Length = 503
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 162/356 (45%), Gaps = 47/356 (13%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSL-CKQLTGDSALDAERKRECPFCI 85
+GLRNLGN+C++N++LQ L+ + + +L L K + + R +
Sbjct: 149 VGLRNLGNTCFMNAILQSLSNLKYFSGYFKELPAIELNVKNMDEQTKKYYTRSYQSDDIS 208
Query: 86 LEKRIVRSLSVDL-----TLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
L + + + L T +P + + + F+ +Q DAHEF+ ++D HN
Sbjct: 209 LVEELRKVLCALWQQGSNTAISPESLFTVVWKVVPRFRGYQQHDAHEFMHCLLDRVHNEL 268
Query: 141 LRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDI 200
L K+ NG +++ IFGG LQS V CL CG S K + D+
Sbjct: 269 LTSKRF----------------TNGCDTIISGIFGGQLQSDVTCLTCGTISKKQEAYRDL 312
Query: 201 SLDIL---------------NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
SLDI ++C L + +Q F + E LD + Y C+ C K + K+
Sbjct: 313 SLDIPFKPKLKTSPGKKKTPSACQLIDCLQSFVEMETLDESEWYMCEKCNKKQPSTKKFW 372
Query: 246 ILQSPNILVIQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPE------YK 296
IL+ PN+L + LKRF + K+D + F + L + F+ K +Q Y
Sbjct: 373 ILRLPNVLCLHLKRFRYSPLARTKVDTFVRFPIKELNMDPFILKTNQKTNRMSIKAHLYD 432
Query: 297 LFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
L +VH G SGHY Y + G WY NDS VS++ + + K YILF+ R
Sbjct: 433 LAACVVHHGSGAGSGHYTTYARHE-GSWYNFNDSSVSLTNEESIQHCKAYILFYTR 487
>gi|384494007|gb|EIE84498.1| hypothetical protein RO3G_09208 [Rhizopus delemar RA 99-880]
Length = 837
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 170/359 (47%), Gaps = 42/359 (11%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQ-LTGDSALDAERKRECPFCIL 86
GL+NLGN+CY+NS++QCL+ T P A + + S L KQ + ++ L F L
Sbjct: 485 GLKNLGNTCYMNSIIQCLSGTIPFARYFI----SGLYKQHINKENFLGTGGVLANEFATL 540
Query: 87 EKRIVRSL-SVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
+RS+ + +P + + + F+ FK Q D+ EFL +++D H C +KK
Sbjct: 541 ----LRSMWGANCNFISPVQFREAITQFSPQFKGSEQHDSQEFLNFLLDGLHEDCNLIKK 596
Query: 146 --------------LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAES 191
R + + + SSVV +F G +S++ CL C S
Sbjct: 597 RPSQPPESPEEEARFERLPDWKASAVAWEKYLERNSSVVVSLFQGQYRSRLTCLTCHTTS 656
Query: 192 NKVDEIMDISLDILNS------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
+ M +SL I + +L + + F + E LD ++ + C CKKL A K ++
Sbjct: 657 TTYNSFMSLSLPIPATRTSPATVNLYQCLDYFVKEETLDDDDAWHCPRCKKLCRASKSLT 716
Query: 246 ILQSPNILVIQLKR--FEGIFGGKIDKAIAFE-EVLVLSSFMCKASQDP-QP------EY 295
I + P++L+I LKR F+G F K++ + L LS ++ + P QP Y
Sbjct: 717 ISKLPDVLLIHLKRFSFDGPFNNKLETMVDSPIRGLDLSKYVPSSMFPPDQPSEKSTFSY 776
Query: 296 KLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 353
L+ H G S GHY A +++ W+ +D+ +SV +++S Y LF++R+
Sbjct: 777 DLYAVSNHYG-SLTGGHYTACVRNGYRNEWHNFDDTRLSVCDESKIMSRAAYNLFYVRS 834
>gi|432868293|ref|XP_004071466.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
1 [Oryzias latipes]
Length = 510
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 174/398 (43%), Gaps = 74/398 (18%)
Query: 6 ELQMSWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLAN 53
E +W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +
Sbjct: 126 EKYTTWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRD 185
Query: 54 FCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIF 113
F L +H C+ + C C + + S + P ++ +
Sbjct: 186 FFLSDRHK--CEM----------QSNSCLVCEMSQLFQEFYSGHRSPHIPFRLLHLVWTH 233
Query: 114 AEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEI 173
A H Q+DAHEFL +D H C KG + G N + ++ +I
Sbjct: 234 ARHLAGYEQQDAHEFLIAALDVLHRHC--------KGDTINDNGKKANNPNHCNCIIDQI 285
Query: 174 FGGALQSQVKCLACGAESNKVDEIMDISLD-------------------------ILNSC 208
F G LQS V C C S +D DISLD + S
Sbjct: 286 FTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGGDSGTVNGEGHLSGST 345
Query: 209 SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGG 266
+L + +++F +PE L + K KC C + KQ+++ + P + LKRFE
Sbjct: 346 TLTDCLRRFTRPEHLGSSAKIKCGGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRR 405
Query: 267 KIDKAIAFEEVLVLSSFMCKASQ--------------DPQPEYKLFGTIVHSGFSPDSGH 312
KI ++F L ++ FM + + + +Y LF + H G + +SGH
Sbjct: 406 KITTYVSFPLELDMTPFMASSKESRMNGQYQQTVEVLNNDNKYSLFAVVNHQG-TLESGH 464
Query: 313 YYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
Y ++I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 465 YTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 502
>gi|164655843|ref|XP_001729050.1| hypothetical protein MGL_3838 [Malassezia globosa CBS 7966]
gi|159102939|gb|EDP41836.1| hypothetical protein MGL_3838 [Malassezia globosa CBS 7966]
Length = 808
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 163/361 (45%), Gaps = 45/361 (12%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRN G +CY+N+ +QCL+ + LA + L + + + + L F L
Sbjct: 454 GLRNFGQTCYMNATIQCLSASVLLAQYLLD---GTYKRAINTQNPLGTRGALANAFASLL 510
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHN--------- 138
+ + SV + AP + + FA F+ Q+D+ EFL +++D H
Sbjct: 511 RALWSEQSVSV---APTAFREAIGQFAPAFRGNEQQDSQEFLMFLLDGLHEDLNLVVQRP 567
Query: 139 TCLRL-----KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNK 193
L L +L R + S+V + F G L++Q+ CL CG S
Sbjct: 568 PALELGEAQQAELSRLPQQLASVAEWSLYRRRNDSIVVDTFQGQLRNQLTCLTCGHTSIT 627
Query: 194 VDEIMDISLDI-----LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQ 248
+ M +SL + ++ SL + M F + EVL+ N + C CKK + K++S+ +
Sbjct: 628 YNAFMSLSLPVPTGRGVSRASLYQCMDAFVREEVLEKGNAWHCPKCKKPRRSTKRLSLAR 687
Query: 249 SPNILVIQLKR--FEGIFGGKIDKAIAF-EEVLVLSSFM--------------CKASQDP 291
P +L+I LKR F G KI+ + F + L LS+FM SQ P
Sbjct: 688 LPPVLIIHLKRFTFRGPASNKIETPVVFATDALDLSNFMPPPLPPGTSVRGIPISESQRP 747
Query: 292 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 351
Y LF H G + SGHY A ++ G WY C+DS ++ S Q + + Y+LFF
Sbjct: 748 PYLYDLFAVTHHFG-TLHSGHYTASVRTQ-GIWYYCDDSRITPSDAQ-IQTSSPYVLFFS 804
Query: 352 R 352
R
Sbjct: 805 R 805
>gi|431895934|gb|ELK05352.1| Ubiquitin carboxyl-terminal hydrolase 3 [Pteropus alecto]
Length = 520
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 169/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 160 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 216
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 217 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 273
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG S+ ING S+VV IFGG LQ++V CL CG
Sbjct: 274 -----LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGFLQNEVNCLICG 328
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + CSL++ ++ F E LD Y C C
Sbjct: 329 TESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKC 388
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 389 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDIYVEFPLRGLDMKCYLLEP-ENS 447
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ V+ K YIL
Sbjct: 448 GPESCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEDTVVKAKAYIL 506
Query: 349 FFI 351
F++
Sbjct: 507 FYV 509
>gi|351713027|gb|EHB15946.1| Ubiquitin carboxyl-terminal hydrolase 22 [Heterocephalus glaber]
Length = 490
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 172/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 112 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 171
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 172 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 220
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG S G N + ++ +IF G
Sbjct: 221 AGYEQQDAHEFLIAALDVLHRHC--------KGDDS---GKKANNPNHCNCIIDQIFTGG 269
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 270 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTQFWPLSPGSEGSMVNGESHASGTTTLTD 329
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 330 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 389
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 390 YVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 448
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 449 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 482
>gi|347361005|ref|NP_001178573.1| ubiquitin carboxyl-terminal hydrolase 22 [Rattus norvegicus]
Length = 525
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 147 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 206
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 207 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 255
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 256 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 304
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 305 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGESHASGTTTLTD 364
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 365 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 424
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 425 YVSFPLELDMTPFMASSKESRMNGQYQQPLDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 483
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 484 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 517
>gi|348525308|ref|XP_003450164.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
[Oreochromis niloticus]
Length = 510
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 174/398 (43%), Gaps = 74/398 (18%)
Query: 6 ELQMSWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLAN 53
E +W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +
Sbjct: 126 EKYTTWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRD 185
Query: 54 FCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIF 113
F L +H C+ + C C + + S + P ++ +
Sbjct: 186 FFLSDRHK--CEM----------QSNSCLVCEMSQLFQEFYSGHRSPHIPFRLLHLVWTH 233
Query: 114 AEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEI 173
A H Q+DAHEFL +D H C KG + G N + ++ +I
Sbjct: 234 ARHLAGYEQQDAHEFLIAALDVLHRHC--------KGDTINDNGKKANNPNHCNCIIDQI 285
Query: 174 FGGALQSQVKCLACGAESNKVDEIMDISLD-------------------------ILNSC 208
F G LQS V C C S +D DISLD + S
Sbjct: 286 FTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGGDGSTVNGESHLSGST 345
Query: 209 SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGG 266
+L + +++F +PE L + K KC C + KQ+++ + P + LKRFE
Sbjct: 346 TLTDCLRRFTRPEHLGSSAKIKCGGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRR 405
Query: 267 KIDKAIAFEEVLVLSSFMCKASQ--------------DPQPEYKLFGTIVHSGFSPDSGH 312
KI ++F L ++ FM + + + +Y LF + H G + +SGH
Sbjct: 406 KITTYVSFPLELDMTPFMASSKESRMNGQYQQSVDVLNNDNKYSLFAVVNHQG-TLESGH 464
Query: 313 YYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
Y ++I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 465 YTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 502
>gi|357604445|gb|EHJ64192.1| putative ubiquitin specific protease 41 [Danaus plexippus]
Length = 913
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 162/346 (46%), Gaps = 39/346 (11%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKREC------ 81
GLRN+GN+C++NSVLQCL+ T PL + + +++S D C
Sbjct: 580 GLRNIGNTCFMNSVLQCLSNTRPLLEYLVDDKYNS-----------DINTTLSCMKGALI 628
Query: 82 -PFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
F + K + RS D ++ A ++S ++ FA F Q+DA EFLRY+++ H
Sbjct: 629 KAFASVIKELWRSGDRDCVVNTTA-LKSQVQRFAPRFMGYSQQDAQEFLRYLLEGLHEDV 687
Query: 141 LRLKK-----LRRKGGGSSGGGGGGET----INGGSSVVKEIFGGALQSQVKCLACGAES 191
R+ L S E + S V +IF G L+S ++C C +S
Sbjct: 688 NRVTVKPKPILTEIDDSLSDSAKAAEAWSRYLRTEDSRVGDIFVGQLKSTLRCTHCLHDS 747
Query: 192 NKVDEIMDISLDI---LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQ 248
D D+SL I + L++ +Q F + E LDG+ K C C K ++ +
Sbjct: 748 VTFDPFWDLSLPIPSRTGNLKLQQCLQHFVREEELDGDEKPTCSKCGVRRKCLKWFTVHK 807
Query: 249 SPNILVIQLKRFEGI--FGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
P +LV+ LKRF F GK+ + F L +S F A+ Y L+ HSG
Sbjct: 808 FPQVLVLHLKRFSPTERFRGKLSVVVEFPLSGLDMSPF---AASPTHATYNLYAVSNHSG 864
Query: 306 FSPDSGHYYAYIKDA-IGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
+ SGHY AY K G W+ NDS V+ ++++S + Y+LF+
Sbjct: 865 TT-YSGHYTAYCKHPYTGDWHEYNDSRVTPIRSRDIVSAEAYVLFY 909
>gi|449266379|gb|EMC77432.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Columba livia]
Length = 490
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 170/363 (46%), Gaps = 52/363 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 130 GLRNLGNTCFMNAILQSLS---NIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 186
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 187 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 243
Query: 141 LRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L +GG ++ ING S+VV IFGG LQ++V CL CG
Sbjct: 244 -----LELQGGFNGVSRSVILQENATLSASNKCCINGASTVVTAIFGGILQNEVNCLICG 298
Query: 189 AESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNC 234
ES K D +D+SLDI + C+L++ ++ F E LD Y C C
Sbjct: 299 TESRKFDPFLDLSLDIPSQFRNKRTKNQENGPMCTLRDCLRSFTDLEELDETELYMCHKC 358
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDP 291
KK + K+ I + P +L + LKRF K+D + F L + ++ + ++
Sbjct: 359 KKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENS 417
Query: 292 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
PE Y L +VH G SGHY AY GRW+ NDS V+++ + V+ K YIL
Sbjct: 418 GPESCLYDLAAVVVHHGSGVGSGHYTAYAAHE-GRWFHFNDSTVTLTDEETVVKAKAYIL 476
Query: 349 FFI 351
F++
Sbjct: 477 FYV 479
>gi|297742094|emb|CBI33881.3| unnamed protein product [Vitis vinifera]
Length = 547
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 144/277 (51%), Gaps = 20/277 (7%)
Query: 81 CPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
C C L I SL+ P K+ L + + +QEDAHEFL+ ++D +
Sbjct: 11 CVLCTLRDHIELSLASSGRAIMPLKLVDNLNNISSSLQRYQQEDAHEFLQCLLDRLDSFY 70
Query: 141 LRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDI 200
L + + G S ++VK +FGG L S+++C CG S+ + ++D+
Sbjct: 71 L----MNQDKGSHSPD----------DNLVKHVFGGYLISKLRCCNCGHISDTYEPLIDL 116
Query: 201 SLDILNSCSLKEAMQKFFQPE-VLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
SL+I + +L A++ F + E + D K+ CDNCK+ VS KQ+ + Q P + LKR
Sbjct: 117 SLEIEDVDTLPCALESFTKVEKIEDPEMKFTCDNCKEEVSVEKQLLLDQVPLVAAFHLKR 176
Query: 260 F--EGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPE--YKLFGTIVHSGFSPDSGHYYA 315
F +G + KIDK + F L L + K +D E Y+L+ + H+GFS SGHY++
Sbjct: 177 FKTDGTYVEKIDKHVEFPLELDLLPYT-KEREDDNVELKYELYAIVEHTGFSSTSGHYFS 235
Query: 316 YIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
YI+ + W+ +DS V+ VL ++ YILF+ R
Sbjct: 236 YIRSSPDTWHRLDDSKVTSVPEDYVLHQEAYILFYAR 272
>gi|356562949|ref|XP_003549730.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine
max]
Length = 592
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 171/391 (43%), Gaps = 80/391 (20%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE------- 80
GL NLGN+C++NSVLQ L +TPPL N+ L +H+ Q + +D KR
Sbjct: 202 GLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRYFCQKKNNGDVDGALKRSGGNNGNK 261
Query: 81 ----CPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDAC 136
C C ++ S D +PAK A + Q+DAHEF ++D
Sbjct: 262 NARTCLACDMDAMFSSVFSGDRAPYSPAKFLYSWWQHAANLATYEQQDAHEFFISMLDGI 321
Query: 137 HNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDE 196
H +++K+R K NG + ++F G L+S V C+ACG S D
Sbjct: 322 HE---KVEKVRCKPHSEG---------NGDCCIAHKVFSGILRSDVTCMACGFTSTTYDP 369
Query: 197 IMDISLDIL---------------NSC----------------SLKEAMQKFFQPEVLDG 225
+DISLD+ +SC +L +++F + E L
Sbjct: 370 CIDISLDLEPNQGGSTKITTASSNHSCNGEPDCMNSSQNCGTSTLMGCLKRFTRAERLGS 429
Query: 226 NNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI----FGGKIDKAIAFEEVLVLS 281
+ K+ C C+ KQMSI + P + +KRFE K+D+ + F L +S
Sbjct: 430 DQKFFCRQCQVRQETLKQMSIRKLPLVSCFHIKRFEHSSTRKMSRKVDRYLQFPFSLDMS 489
Query: 282 SFMC--------------------KASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI 321
++ AS + E++LF + HSG D+GHY Y++ +
Sbjct: 490 PYLSSTILRNRFGNRIFPFDGDEPDASDELCSEFELFAVVTHSG-KLDAGHYVTYLRLS- 547
Query: 322 GRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+WY C+D++V+ V + + Y++F+++
Sbjct: 548 NQWYKCDDAWVTQVDENIVRAAQCYMMFYVQ 578
>gi|324505218|gb|ADY42247.1| Ubiquitin carboxyl-terminal hydrolase 36 [Ascaris suum]
Length = 699
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 173/351 (49%), Gaps = 34/351 (9%)
Query: 10 SWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTG 69
SW+ S L + R +GL N N C+LN+VLQ L +T PLA + +L HS C +
Sbjct: 376 SWRGSRLLQPGCRNSG-VGLFNYSNDCFLNAVLQTLVHTAPLARYVAEL-HS--CSNYSH 431
Query: 70 DSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCL-RIFAEHFKCGRQEDAHEF 128
+ C C + + + R+++ A IQ L +IF H + G QEDAHE
Sbjct: 432 N----------CFVCAMGEHVRRAITSSGPFKA-QWIQPYLKKIFPSH-RPGYQEDAHEL 479
Query: 129 LRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L ++DA T K + G + E S+ ++++FGGAL+++++C CG
Sbjct: 480 LTLILDALDPTPPAAAK---QHNGPATNAPNQEP--SASTPMEQLFGGALRNEIRCFGCG 534
Query: 189 AESNKVDEIMDISLDILNS-----CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQ 243
+ I +++L + + + + +F E L + ++C CK+ A++
Sbjct: 535 ENYVNYERIRELNLGLRMRKREGIVGINDLLVDYFSNETL---SSFECKKCKRKTQAQRV 591
Query: 244 MSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH 303
++++P++LV+QLKRF G KI + E + L FM A D + Y L G I H
Sbjct: 592 TRVIRAPHVLVVQLKRFNAC-GSKIRLPVTIEMNVKLDRFMYLA--DDRNAYSLCGLIEH 648
Query: 304 SGFSPDSGHYYAYIKDAIGR-WYCCNDSYVSVSTLQEVLSEKVYILFFIRA 353
G D GHY A+++ G+ W+C +D ++++V + Y++ + R+
Sbjct: 649 QGEGIDRGHYIAFVRGFDGKGWHCFDDETCQRVSVEDVCKRQGYVMVYTRS 699
>gi|148230765|ref|NP_001085912.1| ubiquitin carboxyl-terminal hydrolase 22-A [Xenopus laevis]
gi|82184225|sp|Q6GNI6.1|UB22A_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22-A; AltName:
Full=Deubiquitinating enzyme 22-A; AltName:
Full=Ubiquitin thioesterase 22-A; AltName:
Full=Ubiquitin-specific-processing protease 22-A
gi|49115779|gb|AAH73524.1| MGC82781 protein [Xenopus laevis]
Length = 523
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 174/394 (44%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 145 TWEPTKRELELLQHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 204
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H C+ + +S C C + S + P ++ + A H
Sbjct: 205 DRHK--CEMQSPNS---------CLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHL 253
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 254 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 302
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 303 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDAGVVNGESHVSGTTTLTD 362
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 363 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 422
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 423 YVSFPLELDMTPFMASSKESRMNGQYQQPSDSLHNDNKYSLFAVVNHQG-TLESGHYTSF 481
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 482 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 515
>gi|355753836|gb|EHH57801.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Macaca
fascicularis]
Length = 469
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 91 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 150
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 151 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 199
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 200 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 248
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 249 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGESHVSGTTTLTD 308
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 309 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 368
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 369 YVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 427
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 428 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 461
>gi|449281395|gb|EMC88475.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Columba livia]
Length = 424
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 160/364 (43%), Gaps = 64/364 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q LT+TP L +F L +H + + C C +
Sbjct: 76 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKC-----------EMQSPSSCLVCEMS 124
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
S + P ++ + A H Q+DAHEFL +D H C
Sbjct: 125 TLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC------- 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
KG G N + ++ +IF G LQS V C C S +D DISLD+ S
Sbjct: 178 -KG---DDNGKKANNPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGS 233
Query: 208 -------------------------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
+L + +++F +PE L + K KC C + K
Sbjct: 234 STPFWPLSPGSDGSVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTK 293
Query: 243 QMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKAS------QDPQP- 293
Q+++ + P + LKRFE KI ++F L ++ FM + Q QP
Sbjct: 294 QLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQPT 353
Query: 294 -------EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 346
+Y LF + H G + +SGHY ++I+ +W+ C+D+ ++ +++++VL + Y
Sbjct: 354 DSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGY 412
Query: 347 ILFF 350
+LF+
Sbjct: 413 LLFY 416
>gi|432868295|ref|XP_004071467.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
2 [Oryzias latipes]
Length = 527
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 174/398 (43%), Gaps = 74/398 (18%)
Query: 6 ELQMSWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLAN 53
E +W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +
Sbjct: 143 EKYTTWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRD 202
Query: 54 FCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIF 113
F L +H C+ + C C + + S + P ++ +
Sbjct: 203 FFLSDRHK--CEM----------QSNSCLVCEMSQLFQEFYSGHRSPHIPFRLLHLVWTH 250
Query: 114 AEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEI 173
A H Q+DAHEFL +D H C KG + G N + ++ +I
Sbjct: 251 ARHLAGYEQQDAHEFLIAALDVLHRHC--------KGDTINDNGKKANNPNHCNCIIDQI 302
Query: 174 FGGALQSQVKCLACGAESNKVDEIMDISLD-------------------------ILNSC 208
F G LQS V C C S +D DISLD + S
Sbjct: 303 FTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGGDSGTVNGEGHLSGST 362
Query: 209 SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGG 266
+L + +++F +PE L + K KC C + KQ+++ + P + LKRFE
Sbjct: 363 TLTDCLRRFTRPEHLGSSAKIKCGGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRR 422
Query: 267 KIDKAIAFEEVLVLSSFMCKASQ--------------DPQPEYKLFGTIVHSGFSPDSGH 312
KI ++F L ++ FM + + + +Y LF + H G + +SGH
Sbjct: 423 KITTYVSFPLELDMTPFMASSKESRMNGQYQQTVEVLNNDNKYSLFAVVNHQG-TLESGH 481
Query: 313 YYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
Y ++I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 482 YTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 519
>gi|344298090|ref|XP_003420727.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Loxodonta
africana]
Length = 592
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 214 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 273
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 274 DRHKC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 322
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 323 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 371
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 372 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSMVNGESHASGTTTLTD 431
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 432 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 491
Query: 271 AIAFEEVLVLSSFMCKA------SQDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 492 YVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 550
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 551 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 584
>gi|148234990|ref|NP_001080551.1| ubiquitin specific peptidase 8 [Xenopus laevis]
gi|27697056|gb|AAH43910.1| Usp8-prov protein [Xenopus laevis]
Length = 1063
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 171/354 (48%), Gaps = 34/354 (9%)
Query: 23 GGPPL-GLRNLGNSCYLNSVLQCLTYTPPLANFCLK--LQHSSLCKQLTGDSALDAERKR 79
GP L GLRNLGN+CY+NS+LQCL TP LA + K Q L G AE
Sbjct: 718 AGPALTGLRNLGNTCYMNSILQCLCNTPHLAEYFNKNCYQADINRSNLLGHKGEVAEE-- 775
Query: 80 ECPF-CILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHN 138
F CI++ + +P + + E F +D+ E L +++D H
Sbjct: 776 ---FGCIMKAL----WTGQYKCISPKDFKITIGKINEQFAGYSHQDSQELLLFLMDGLHE 828
Query: 139 TCLRLKKLRRKGGGSSGGGGGGETINGG--------SSVVKEIFGGALQSQVKCLACGAE 190
+ +R+ ++ + + S++ +F G +S V+CL C +
Sbjct: 829 DLNKADNRKRQKEENNDHLSDSQAADSAWYKHKQLNESIIVSLFQGQFKSTVQCLTCQKK 888
Query: 191 SNKVDEIMDISLDILNS--CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQ 248
S + M +SL + ++ CSLK+ ++ F + E L +N++ C NCK A K++ I +
Sbjct: 889 SRTFEAFMYLSLPLPSTSKCSLKDCIKAFAKEEKLTDSNRFDCSNCKTQRVATKKIEIWK 948
Query: 249 SPNILVIQLKR--FEGIFGGKIDKAIAFE-EVLVLSSFMC--KASQDPQPEYKLFGTIVH 303
P IL++ LKR FEG + K+ + F E L LS ++ K+S+ +Y LFG H
Sbjct: 949 LPPILLVHLKRFSFEGRWRQKLQAYVDFPLESLDLSPYVIGPKSSK----KYNLFGVSNH 1004
Query: 304 SGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
G D GHY AY K+A+ RW+ +D VS ++ V + Y+LF+ + R
Sbjct: 1005 YG-GLDGGHYTAYCKNALKQRWFKFDDHDVSDISVSSVKTSAAYMLFYTSLDLR 1057
>gi|125539986|gb|EAY86381.1| hypothetical protein OsI_07760 [Oryza sativa Indica Group]
Length = 415
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 163/367 (44%), Gaps = 47/367 (12%)
Query: 16 LSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDA 75
L E G GL N GN+CY NSVLQ L + P L+ + + + D+ L
Sbjct: 61 LGEHFPEGERYFGLENFGNTCYCNSVLQALYHCIPFREQLLEYYATYKNTEDSEDNLLTC 120
Query: 76 ERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRY---- 131
+ +KR + AP + +R E F+ +DAHEF +
Sbjct: 121 LADLFAQITLAKKRT--------GVLAPKRFVQRVRKQNELFRSYMHQDAHEFWNFLVND 172
Query: 132 VIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGS-------------SVVKEIFGGAL 178
+ID C + SS E NG + ++V F G L
Sbjct: 173 IIDILEEDC--------RTANSSPETTPEEVSNGAANALANGARERPLVTLVHRTFQGIL 224
Query: 179 QSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLV 238
++ KCL C + K + D+S+D+ + SL ++ FF E+L+G +K+ CD C L
Sbjct: 225 TNETKCLMCDTITAKDETFFDLSIDVEQNSSLTSCLKSFFSTEILNGEDKFFCDKCSSLQ 284
Query: 239 SARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLF 298
A K+M I ++P++LVI LKRF+ + K +++ V L + S+D EY LF
Sbjct: 285 EAHKRMKIKKAPHVLVIHLKRFKYVEQLSRHKKLSYRVVYPLELKLGSMSEDADCEYSLF 344
Query: 299 GTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSV---STLQEVL----------SEKV 345
+VH G SP+ GHY + IK + G W +D V + STLQ ++
Sbjct: 345 AVVVHVGSSPNHGHYVSQIK-SHGNWLSFDDDTVQISEESTLQTFYGSSREHCGGNTDHG 403
Query: 346 YILFFIR 352
YILF+ R
Sbjct: 404 YILFYER 410
>gi|348502347|ref|XP_003438729.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
[Oreochromis niloticus]
Length = 506
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 175/394 (44%), Gaps = 78/394 (19%)
Query: 10 SWQPS-----LLSE--KRKR--GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR+R +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 130 TWEPTKRELELLRHNPKRRRITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 189
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H C+ + C C + + S + P ++ + A H
Sbjct: 190 DRHK--CEM----------QSNSCLVCEMSQLFQEFYSGHRSPHIPFRLLHLVWTHARHL 237
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C G N + ++ +IF G
Sbjct: 238 AGYEQQDAHEFLIAALDVLHRHC------------KDDNGKKANNPNHCNCIIDQIFTGG 285
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDI------------------LN-------SCSLKE 212
LQS V C AC S +D DISLD+ LN + +L +
Sbjct: 286 LQSDVTCQACHGVSTTIDPFWDISLDLPGSSTPFWPLSPGGDGSALNGESHTTGATTLTD 345
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 346 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 405
Query: 271 AIAFEEVLVLSSFMCKASQ-----------DP---QPEYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + + DP +Y LF + H G + +SGHY +
Sbjct: 406 YVSFPLELDMTPFMASSKESRMNGQYQQTVDPFNNDNKYSLFAVVNHQG-TLESGHYTTF 464
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 465 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 498
>gi|242000514|ref|XP_002434900.1| hypothetical protein IscW_ISCW018973 [Ixodes scapularis]
gi|215498230|gb|EEC07724.1| hypothetical protein IscW_ISCW018973 [Ixodes scapularis]
Length = 1161
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 119/244 (48%), Gaps = 55/244 (22%)
Query: 111 RIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVV 170
R+ F +QEDAHEFLRYV+D L + GG + + ++VV
Sbjct: 410 RLEMRPFMSDKQEDAHEFLRYVVDNLWKAAL----------ANHDGGPKLDPASKETTVV 459
Query: 171 KEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYK 230
EIFGG +SQV C+ C SN D MD+ LDI N+ SL++A++KF +PE+L +N YK
Sbjct: 460 NEIFGGYHRSQVICMRCKKTSNTYDHFMDLILDIKNASSLEKALEKFVEPELLQNDNAYK 519
Query: 231 CDNCKKLVSARKQMSILQSPNILVIQLKRFEG--IFGGKIDKAIAFEEVLVLSSFMCKAS 288
C C V A+K+ ++ + PN+ Q KRF+ +FGGKI K +++ E L + FM
Sbjct: 520 CPRCNVKVEAQKRFTVHRPPNVATFQFKRFDSNRMFGGKITKHVSYPERLEMRPFM---- 575
Query: 289 QDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
+D V +L +VL+++ Y+L
Sbjct: 576 ---------------------------------------SDKQVHQVSLGQVLNQQAYVL 596
Query: 349 FFIR 352
F++R
Sbjct: 597 FYVR 600
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 206 NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEG--I 263
N+ SL++A++KF +PE+L +N YKC C V A+K+ ++ + PN+ Q KRF+ +
Sbjct: 337 NASSLEKALEKFVEPELLQNDNAYKCPRCNVKVEAQKRFTVHRPPNVATFQFKRFDSNRM 396
Query: 264 FGGKIDKAIAFEEVLVLSSFMCKASQD 290
FGGKI K +++ E L + FM +D
Sbjct: 397 FGGKITKHVSYPERLEMRPFMSDKQED 423
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 15/78 (19%)
Query: 18 EKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAE 76
E RK G GL NLGN+C++N+V+QCLTY PPLAN+ L + H + CK +
Sbjct: 245 EVRKIGA---GLVNLGNTCFMNTVIQCLTYCPPLANYLLHQDNHCAKCKTINF------- 294
Query: 77 RKRECPFCILEKRIVRSL 94
C C L+K + R+L
Sbjct: 295 ----CMMCELQKHMRRAL 308
>gi|297603462|ref|NP_001054070.2| Os04g0647300 [Oryza sativa Japonica Group]
gi|255675832|dbj|BAF15984.2| Os04g0647300, partial [Oryza sativa Japonica Group]
Length = 591
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 166/379 (43%), Gaps = 69/379 (18%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSS-LCKQLTG--DSALDAERKRECPFC 84
GL NLGN+C++NSVLQ L + PPL N+ L +H+ LC + T + +A K C C
Sbjct: 212 GLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRYLCPRQTPMRRRSAEANDKAACLAC 271
Query: 85 ILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLK 144
L++ + S + T +PAK A + Q+DAHEF ++D H +
Sbjct: 272 DLDEIYSAAFSGERTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIH------E 325
Query: 145 KLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI 204
++ S G +G + +F G L+S V C CG S + MDISLD+
Sbjct: 326 NIKDDQHKSLAQG------HGDCCIAHRVFSGILRSDVTCTHCGFTSTTFEPCMDISLDL 379
Query: 205 ----------------------------LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKK 236
+L +++F + E LD K+ C+ CK+
Sbjct: 380 DAGYNNSLGVANPKVHVRNGERSSGGTNTKVSTLMRCLERFTRAERLDAEQKFFCERCKE 439
Query: 237 LVSARKQMSILQSPNILVIQLKRFEGI----FGGKIDKAIAFEEVLVLSSFM-------- 284
+ KQMSI + P + +KRFE K+D + F L ++ ++
Sbjct: 440 RQESLKQMSIRRLPLVSCFHIKRFEHSSVKKMSRKVDHCLQFPFSLDMAPYLSSSILRSR 499
Query: 285 ------------CKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYV 332
+ + E+++F I+HSG ++GHY Y++ WY C+D++V
Sbjct: 500 FGNRIFPSEASDADSVSEFSSEFEIFAVIMHSG-KLEAGHYVTYLR-LNNHWYKCDDAWV 557
Query: 333 SVSTLQEVLSEKVYILFFI 351
+ V + + Y+LF++
Sbjct: 558 TRVEEHTVRTSQAYMLFYV 576
>gi|60360058|dbj|BAD90248.1| mKIAA1063 protein [Mus musculus]
Length = 570
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 192 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 251
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 252 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 300
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 301 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 349
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 350 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGESHASGTTTLTD 409
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 410 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 469
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 470 YVSFPLELDMTPFMASSKESRMNGQYQQPLDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 528
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 529 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 562
>gi|395822291|ref|XP_003784454.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Otolemur garnettii]
Length = 520
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 170/361 (47%), Gaps = 48/361 (13%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 160 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 216
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 217 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 273
Query: 141 LRLKKLRRKGGGSSGGGGGGET----------INGGSSVVKEIFGGALQSQVKCLACGAE 190
+L+ G S E ING S+VV IFGG LQ++V CL CG E
Sbjct: 274 ---LELQDGFNGVSHSAILQENSTLSTSNKCCINGSSTVVTAIFGGILQNEVNCLICGTE 330
Query: 191 SNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNCKK 236
S K D +D+SLDI + CSL++ ++ F E LD Y C CKK
Sbjct: 331 SRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKK 390
Query: 237 LVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQP 293
+ K+ I + P +L + LKRF K+D + F L + ++ + ++ P
Sbjct: 391 KQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENSGP 449
Query: 294 E---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
E Y L +VH G SGHY AY GRW+ NDS V+++ + V+ K YILF+
Sbjct: 450 ENCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEETVVKAKAYILFY 508
Query: 351 I 351
+
Sbjct: 509 V 509
>gi|345305249|ref|XP_001511206.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
[Ornithorhynchus anatinus]
Length = 540
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 162 TWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 221
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P ++ + A H
Sbjct: 222 DRHKC-----------EMQSPSSCLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHL 270
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 271 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 319
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 320 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGESHVSGTTTLTD 379
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 380 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 439
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 440 YVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 498
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 499 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 532
>gi|262118284|ref|NP_001160039.1| ubiquitin carboxyl-terminal hydrolase 22 [Bos taurus]
gi|229558005|sp|P0C8Z3.1|UBP22_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22; AltName:
Full=Deubiquitinating enzyme 22; AltName: Full=Ubiquitin
thioesterase 22; AltName:
Full=Ubiquitin-specific-processing protease 22
gi|296476572|tpg|DAA18687.1| TPA: ubiquitin carboxyl-terminal hydrolase 22 [Bos taurus]
Length = 514
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 170/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 136 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 195
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 196 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 244
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 245 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 293
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 294 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSESSVVNGESHVSGTTTLTD 353
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 354 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 413
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 414 YVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 472
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++ +VL + Y+LF+
Sbjct: 473 IRQHKDQWFKCDDAIITKASIADVLDSEGYLLFY 506
>gi|224088268|ref|XP_002308398.1| predicted protein [Populus trichocarpa]
gi|222854374|gb|EEE91921.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 116/188 (61%), Gaps = 3/188 (1%)
Query: 167 SSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGN 226
+S+V +IFGG+L SQV+C C SNK D +D+SL+I + +L ++ F ++LDG
Sbjct: 27 TSLVHKIFGGSLCSQVECQQCSYCSNKFDPFLDLSLEIAKADTLPALLRNFTAADMLDGG 86
Query: 227 NK-YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG-KIDKAIAFEEVLVLSSFM 284
K Y+C CK+ V A+K +++ ++P++L I LKRF G K+D+ + F+ L + F+
Sbjct: 87 EKHYQCQRCKQKVRAKKWLTVHKAPHVLTIHLKRFHAHDPGRKVDRKVIFDRSLDMKPFV 146
Query: 285 CKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK 344
S + +Y L+G +VH G + SGHY +++ + G W+ ND+ V + + VL +K
Sbjct: 147 S-GSYEGDLKYSLYGVLVHYGHNTHSGHYVCFVRTSSGIWHLLNDNQVRQVSEKAVLEQK 205
Query: 345 VYILFFIR 352
Y+LF++R
Sbjct: 206 AYMLFYVR 213
>gi|21450103|ref|NP_659186.1| ubiquitin carboxyl-terminal hydrolase 3 [Mus musculus]
gi|30580632|sp|Q91W36.1|UBP3_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|16877850|gb|AAH17156.1| Ubiquitin specific peptidase 3 [Mus musculus]
gi|26327065|dbj|BAC27276.1| unnamed protein product [Mus musculus]
gi|148694176|gb|EDL26123.1| ubiquitin specific peptidase 3 [Mus musculus]
Length = 520
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 172/375 (45%), Gaps = 66/375 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFC--------LKLQHSSLCKQLT------GDSAL 73
GLRNLGN+C++N++LQ L+ + FC ++L++ + T GDS +
Sbjct: 160 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDSNV 216
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
+ C L + + S + KI +F+ +Q+DAHEF+RY++
Sbjct: 217 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMP-------NFRGYQQQDAHEFMRYLL 269
Query: 134 DACHNTCLRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQ 181
D H L +GG S+ ING S+VV IFGG LQ++
Sbjct: 270 DHLH--------LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNE 321
Query: 182 VKCLACGAESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNN 227
V CL CG ES K D +D+SLDI + CSL++ ++ F E LD
Sbjct: 322 VNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETE 381
Query: 228 KYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFM 284
Y C CKK + K+ I + P L + LKRF K+D + F L + ++
Sbjct: 382 LYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRNKVDTYVQFPLRGLDMKCYL 441
Query: 285 CKASQDPQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVL 341
+ ++ P+ Y L +VH G SGHY AY GRW+ NDS V+V+ + V
Sbjct: 442 LEP-ENSGPDSCLYDLAAVVVHHGSGVGSGHYTAYAVHE-GRWFHFNDSTVTVTDEETVG 499
Query: 342 SEKVYILFFIRANQR 356
K YILF++ R
Sbjct: 500 KAKAYILFYVERQAR 514
>gi|395822293|ref|XP_003784455.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
[Otolemur garnettii]
Length = 476
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 170/361 (47%), Gaps = 48/361 (13%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----LDAERKRECPF 83
GLRNLGN+C++N++LQ L+ + FC + + G +A + +
Sbjct: 116 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 172
Query: 84 CILE---KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
++E K + T +P + + +F+ +Q+DAHEF+RY++D H
Sbjct: 173 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH--- 229
Query: 141 LRLKKLRRKGGGSSGGGGGGET----------INGGSSVVKEIFGGALQSQVKCLACGAE 190
+L+ G S E ING S+VV IFGG LQ++V CL CG E
Sbjct: 230 ---LELQDGFNGVSHSAILQENSTLSTSNKCCINGSSTVVTAIFGGILQNEVNCLICGTE 286
Query: 191 SNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNCKK 236
S K D +D+SLDI + CSL++ ++ F E LD Y C CKK
Sbjct: 287 SRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKK 346
Query: 237 LVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQP 293
+ K+ I + P +L + LKRF K+D + F L + ++ + ++ P
Sbjct: 347 KQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEP-ENSGP 405
Query: 294 E---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
E Y L +VH G SGHY AY GRW+ NDS V+++ + V+ K YILF+
Sbjct: 406 ENCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEETVVKAKAYILFY 464
Query: 351 I 351
+
Sbjct: 465 V 465
>gi|47225852|emb|CAF98332.1| unnamed protein product [Tetraodon nigroviridis]
Length = 511
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 181/394 (45%), Gaps = 59/394 (14%)
Query: 6 ELQMSWQP-SLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLC 64
+LQ S P S L ++R GLRNLGN+C++N++LQ L+ + + +L SL
Sbjct: 137 KLQESLAPDSKLVKERWDCSRCTGLRNLGNTCFMNAILQSLSNIEQFSCYFKELPAVSLR 196
Query: 65 KQLT-----------GDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIF 113
T G+S++ + C L + + S D KI R +
Sbjct: 197 SGKTAGRRMYHTRSQGESSVSLVEEFRKTLCSLWQGSQTAFSPDSLFYTIWKIMPSFRGY 256
Query: 114 AEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSS-----------GGGGGGET 162
+Q+DAHEF+RY++D H ++L+ G+S G
Sbjct: 257 -------QQQDAHEFMRYLLDHLH------RELQNSRNGASHTASPQDGVRLTAADGKCC 303
Query: 163 INGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILN--------------SC 208
ING +SVV IFGG LQ++V CL CG ES K D +D+SLDI + +C
Sbjct: 304 INGTASVVTSIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRQKRSKDQEPGPTC 363
Query: 209 SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGG 266
+L + ++ F E LD Y C CKK + K+ + + P +L + LKRF
Sbjct: 364 TLSDCLRSFTDLEELDDTELYFCHKCKKRQKSTKKFWVQKLPKVLCLHLKRFHWTAFLRN 423
Query: 267 KIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KID + F + L + ++ + ++ PE ++ + + SP Y +D RWY
Sbjct: 424 KIDTYVEFPLKGLDMRGYLLEP-ENSLPESCVYDLVAVA--SPSMDLAYGSHED---RWY 477
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVS 359
NDS V++++ V K YILF++ +R S
Sbjct: 478 HFNDSTVTLTSEDAVRKAKAYILFYVERAKRVAS 511
>gi|440907885|gb|ELR57973.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Bos grunniens
mutus]
Length = 468
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 170/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 90 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 149
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 150 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 198
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 199 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 247
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 248 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSESSVVNGESHVSGTTTLTD 307
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 308 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 367
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 368 YVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 426
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++ +VL + Y+LF+
Sbjct: 427 IRQHKDQWFKCDDAIITKASIADVLDSEGYLLFY 460
>gi|294979873|pdb|3MHH|A Chain A, Structure Of The Saga Ubp8SGF11SUS1SGF73 DUB MODULE
gi|294979877|pdb|3MHS|A Chain A, Structure Of The Saga Ubp8SGF11SUS1SGF73 DUB MODULE BOUND
Ubiquitin Aldehyde
gi|400261283|pdb|4FJC|A Chain A, Structure Of The Saga Ubp8SGF11(1-72, Delta-Znf)SUS1SGF73
DUB Module
gi|400261287|pdb|4FJC|E Chain E, Structure Of The Saga Ubp8SGF11(1-72, Delta-Znf)SUS1SGF73
DUB Module
Length = 476
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 170/362 (46%), Gaps = 46/362 (12%)
Query: 14 SLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSAL 73
+++ +R G GL N+G++C+++S+LQCL + P + HS+ CK + D
Sbjct: 130 TMVPSMERRDGLS-GLINMGSTCFMSSILQCLIHNPYFIRHSMSQIHSNNCKVRSPD--- 185
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAK-------------IQSCLRIFAEHFKCG 120
+C C L+K IV L L + + +C ++
Sbjct: 186 ------KCFSCALDK-IVHELYGALNTKQASSSSTSTNRQTGFIYLLTCAWKINQNLAGY 238
Query: 121 RQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQS 180
Q+DAHEF +++I+ H + + L S E I V +F G+L+S
Sbjct: 239 SQQDAHEFWQFIINQIHQS--YVLDLPNAKEVSRANNKQCECI------VHTVFEGSLES 290
Query: 181 QVKCLACGAES-NKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVS 239
+ C C S +D +D+SLDI + L E + F + E L N Y C C
Sbjct: 291 SIVCPGCQNNSKTTIDPFLDLSLDIKDKKKLYECLDSFHKKEQLKDFN-YHCGECNSTQD 349
Query: 240 ARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQDPQPE-- 294
A KQ+ I + P++LV+QLKRFE + G K+D I F L + ++ +D E
Sbjct: 350 AIKQLGIHKLPSVLVLQLKRFEHLLNGSNRKLDDFIEFPTYLNMKNYCSTKEKDKHSENG 409
Query: 295 ------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
Y+L G + H G + + GHY A+ K + G+W+ NDS VS + +EVL E+ Y+L
Sbjct: 410 KVPDIIYELIGIVSHKG-TVNEGHYIAFCKISGGQWFKFNDSMVSSISQEEVLKEQAYLL 468
Query: 349 FF 350
F+
Sbjct: 469 FY 470
>gi|449475954|ref|XP_002188777.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
[Taeniopygia guttata]
Length = 476
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 98 TWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 157
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P ++ + A H
Sbjct: 158 DRHKC-----------EMQSPSSCLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHL 206
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 207 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 255
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 256 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGESHVSGTTTLTD 315
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 316 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 375
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 376 YVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 434
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 435 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 468
>gi|301787135|ref|XP_002928982.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
[Ailuropoda melanoleuca]
Length = 523
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 169/394 (42%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 145 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 204
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 205 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 253
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 254 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 302
Query: 178 LQSQVKCLACGAESNKVDEIMDISLD-------------------------ILNSCSLKE 212
LQS V C C S +D DISLD + + +L +
Sbjct: 303 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGESHVAGTTTLTD 362
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L K KC C + KQ+++ + P + LKRFE KI
Sbjct: 363 CLRRFTRPEHLGSGAKIKCSGCHSYQESTKQLTMKKVPIVACFHLKRFEHSAKLRRKITT 422
Query: 271 AIAFEEVLVLSSFMCKA--------------SQDPQPEYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + S + +Y LF + H G + +SGHY ++
Sbjct: 423 YVSFPLELDMTPFMASSKESRMNGQYQQLTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 481
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 482 IRQHKDQWFKCDDAIITKASIEDVLDSEGYLLFY 515
>gi|344293060|ref|XP_003418242.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Loxodonta
africana]
Length = 396
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 28/340 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L + +AL E F L
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSSSAHTALMEE------FAKL 112
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL--- 143
+ I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN R+
Sbjct: 113 IQTIWTSSPNDVV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVR 170
Query: 144 -----KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ L R G + + S + ++F G L+S + C CG S D
Sbjct: 171 PKSNPENLDRLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTECGYCSTVFDPFW 230
Query: 199 DISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
D+SL I +L + M+ F + +VLDG+ K C C K+ SI + P ILV
Sbjct: 231 DLSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCGARKRCIKKFSIQRFPKILV 290
Query: 255 IQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
+ LKRF I K+ ++F L L F + + Y L+ HSG + G
Sbjct: 291 LHLKRFSESRIRTSKLTTFVSFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMGG 347
Query: 312 HYYAYIKD-AIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HY AY + G W+ NDS V+ + +V + Y+LF+
Sbjct: 348 HYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 387
>gi|302803594|ref|XP_002983550.1| hypothetical protein SELMODRAFT_118322 [Selaginella moellendorffii]
gi|300148793|gb|EFJ15451.1| hypothetical protein SELMODRAFT_118322 [Selaginella moellendorffii]
Length = 567
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 181/398 (45%), Gaps = 85/398 (21%)
Query: 11 WQPS----LLSEKRKRGGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSL 63
W+PS L+ E RG PLGLR N+G++C++NSVLQ L +TPPL ++ L +H+
Sbjct: 160 WEPSSKDPLVLE---RGAAPLGLRGLTNMGSTCFMNSVLQALLHTPPLRSYFLGHRHNKA 216
Query: 64 CKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIF---------- 113
Q + C C ++ + S D T +PA+ +F
Sbjct: 217 ACQ-----------SKVCLGCDMDDMFAAAFSGDRTPYSPAQFLYRRYLFLFSFLNSWWQ 265
Query: 114 -AEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKE 172
A + Q+DAH+F ++ H + +LR+ G E +V
Sbjct: 266 HAANLAGYEQQDAHDFFISAVEGIHANS-QQPELRK--------GNDAEC----RCIVHR 312
Query: 173 IFGGALQSQVKCLACGAESNKVDEIMDISLDI----------LNSCSLKEAMQKFFQPEV 222
+F G L+S V C ACG S K D +DISLD+ +S +L + +F +PE
Sbjct: 313 VFFGLLRSDVTCTACGFTSTKNDPCVDISLDLESTALEKQIYASSSTLLGCLDRFTRPER 372
Query: 223 LDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVL 280
L + ++ C++C+ A KQMS+ + P +L +KRFE K+D + F L +
Sbjct: 373 LSSSERFFCESCQSRQEAVKQMSVRKLPVVLSFHVKRFEHSAKNYRKVDTYVQFPLSLDM 432
Query: 281 SSFMCKA--------------------------SQDPQPEYKLFGTIVHSGFSPDSGHYY 314
+ ++ + S P E++LF + HSG D GHY
Sbjct: 433 ACYLSSSIARLRHGNRLIFVEGKGELGGDNDSGSTSPSSEFELFAVVSHSG-KLDGGHYV 491
Query: 315 AYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
AY++ G WY C+D++++ V + + Y+L++++
Sbjct: 492 AYLRLG-GEWYKCDDAWITRVGESVVRATQAYMLYYVQ 528
>gi|6323879|ref|NP_013950.1| Ubp8p [Saccharomyces cerevisiae S288c]
gi|1717872|sp|P50102.1|UBP8_YEAST RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
Full=Deubiquitinating enzyme 8; AltName: Full=Ubiquitin
thioesterase 8; AltName:
Full=Ubiquitin-specific-processing protease 8
gi|295789530|pdb|3M99|A Chain A, Structure Of The Ubp8-Sgf11-Sgf73-Sus1 Saga Dub Module
gi|887604|emb|CAA90194.1| unknown [Saccharomyces cerevisiae]
gi|151945927|gb|EDN64159.1| ubiquitin-specific processing protease [Saccharomyces cerevisiae
YJM789]
gi|285814227|tpg|DAA10122.1| TPA: Ubp8p [Saccharomyces cerevisiae S288c]
gi|392297392|gb|EIW08492.1| Ubp8p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 471
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 170/362 (46%), Gaps = 46/362 (12%)
Query: 14 SLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSAL 73
+++ +R G GL N+G++C+++S+LQCL + P + HS+ CK + D
Sbjct: 125 TMVPSMERRDGLS-GLINMGSTCFMSSILQCLIHNPYFIRHSMSQIHSNNCKVRSPD--- 180
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAK-------------IQSCLRIFAEHFKCG 120
+C C L+K IV L L + + +C ++
Sbjct: 181 ------KCFSCALDK-IVHELYGALNTKQASSSSTSTNRQTGFIYLLTCAWKINQNLAGY 233
Query: 121 RQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQS 180
Q+DAHEF +++I+ H + + L S E I V +F G+L+S
Sbjct: 234 SQQDAHEFWQFIINQIHQS--YVLDLPNAKEVSRANNKQCECI------VHTVFEGSLES 285
Query: 181 QVKCLACGAES-NKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVS 239
+ C C S +D +D+SLDI + L E + F + E L N Y C C
Sbjct: 286 SIVCPGCQNNSKTTIDPFLDLSLDIKDKKKLYECLDSFHKKEQLKDFN-YHCGECNSTQD 344
Query: 240 ARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQDPQPE-- 294
A KQ+ I + P++LV+QLKRFE + G K+D I F L + ++ +D E
Sbjct: 345 AIKQLGIHKLPSVLVLQLKRFEHLLNGSNRKLDDFIEFPTYLNMKNYCSTKEKDKHSENG 404
Query: 295 ------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
Y+L G + H G + + GHY A+ K + G+W+ NDS VS + +EVL E+ Y+L
Sbjct: 405 KVPDIIYELIGIVSHKG-TVNEGHYIAFCKISGGQWFKFNDSMVSSISQEEVLKEQAYLL 463
Query: 349 FF 350
F+
Sbjct: 464 FY 465
>gi|327283669|ref|XP_003226563.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
1 [Anolis carolinensis]
Length = 525
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 147 TWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 206
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P ++ + A H
Sbjct: 207 DRHKC-----------EMQSPSSCLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHL 255
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 256 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 304
Query: 178 LQSQVKCLACGAESNKVDEIMDISLD-------------------------ILNSCSLKE 212
LQS V C C S +D DISLD + + +L +
Sbjct: 305 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGESHVTGTTTLTD 364
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 365 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 424
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 425 YVSFPLELDMTPFMASSKESRMNGQYQQPADSLNNDNKYSLFAVVNHQG-TLESGHYTSF 483
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 484 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 517
>gi|297804390|ref|XP_002870079.1| hypothetical protein ARALYDRAFT_329738 [Arabidopsis lyrata subsp.
lyrata]
gi|297315915|gb|EFH46338.1| hypothetical protein ARALYDRAFT_329738 [Arabidopsis lyrata subsp.
lyrata]
Length = 1082
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 156/328 (47%), Gaps = 32/328 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+LNSV QC T+T PL ++ C G+ C L
Sbjct: 562 GLWNLGNTCFLNSVFQCFTHTVPLIESLRAYKYEVPCH--CGNEFF-------CVIRALR 612
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I +L + AP + L F+ F+ +QEDAHEFL+ L+KL
Sbjct: 613 YHIEAALRPERCPIAPYYFLNNLNYFSPDFQRYQQEDAHEFLQAF----------LEKLE 662
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
R G G + +++F G L S ++C C + S ++ + +SL+I ++
Sbjct: 663 RCGSDRRSFHGNISS--------QDVFAGRLISGLRCCNCNSVSETFEKSVGLSLEIEDA 714
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFG 265
+L A++ F + E LD + CD C + VS KQM + + P + LKRF+ G F
Sbjct: 715 DTLGSALESFTRVEKLD--EQLTCDTCNEKVSKEKQMLLDKLPLVATFHLKRFKTNGFFM 772
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDP-QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRW 324
KI K + + L +M + ++ +Y L+ + H G+S GHY +Y++ A W
Sbjct: 773 EKIFKHVKIPLEIDLQPYMRNSQENEVSTKYHLYALVEHLGYSVAYGHYSSYVRSAPKIW 832
Query: 325 YCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+ +DS V+ VLS+ YILF+ R
Sbjct: 833 HHFDDSKVTRIDEDRVLSQDSYILFYAR 860
>gi|118097855|ref|XP_414805.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A [Gallus
gallus]
Length = 490
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 112 TWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 171
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P ++ + A H
Sbjct: 172 DRHKC-----------EMQSPSSCLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHL 220
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 221 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 269
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 270 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGESHVSGTTTLTD 329
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 330 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 389
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 390 YVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 448
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 449 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 482
>gi|296082153|emb|CBI21158.3| unnamed protein product [Vitis vinifera]
Length = 529
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 179/382 (46%), Gaps = 61/382 (15%)
Query: 1 MGLAHELQMSWQPSLLS--EKRKRGGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFC 55
+GL EL+ L+S ++R + PLGLR NLGN+C++NSVLQ L + PPL N+
Sbjct: 148 LGLGLELEWKRSKRLISMADRRAKSIFPLGLRGLNNLGNTCFMNSVLQALFHAPPLRNYF 207
Query: 56 LKLQHSSL-CKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFA 114
L +H+ C++ + D R C C ++ S D T +PA+ +
Sbjct: 208 LSDRHNRQSCRRRSSD--------RLCLPCDIDVIFSAVFSGDRTPYSPARFLYSWWQHS 259
Query: 115 EHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIF 174
E+ Q+DAHEF ++D H K G S G + + + F
Sbjct: 260 ENLASYEQQDAHEFFISMLDQIH----------VKEGKS---GNQDKDNRDCQCIAHKAF 306
Query: 175 GGALQSQVKCLACGAESNKVDEIMDISLDI-LNSC-------------------SLKEAM 214
G L+S V C CG S D +DISL++ ++ C +L +
Sbjct: 307 SGLLRSDVTCTTCGFTSTTYDPCVDISLNLDMSFCPSTGMTNRTTKPNENAIISTLLGCL 366
Query: 215 QKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI----FGGKIDK 270
F +PE L + K C NC++ ++ KQMSI + P +L + +KRFE KID+
Sbjct: 367 DLFTRPEKLGPDQKLYCQNCQERRNSLKQMSIRRLPIVLCLHIKRFEHSTIRKMSRKIDQ 426
Query: 271 AIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDS 330
+ F L ++ ++ + +F + HSG +SGHY Y++ RWY C+D+
Sbjct: 427 YLQFPFSLDMTPYLSSSI--------VFAVVTHSGML-ESGHYVTYVR-VRNRWYKCDDA 476
Query: 331 YVSVSTLQEVLSEKVYILFFIR 352
+++ V + + Y++++++
Sbjct: 477 WITEVDEGVVRASQCYLMYYVQ 498
>gi|349580513|dbj|GAA25673.1| K7_Ubp8p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 471
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 170/362 (46%), Gaps = 46/362 (12%)
Query: 14 SLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSAL 73
+++ +R G GL N+G++C+++S+LQCL + P + HS+ CK + D
Sbjct: 125 TMVPSMERRDGLS-GLINMGSTCFMSSILQCLIHNPYFIRHSMSQIHSNNCKVRSPD--- 180
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAK-------------IQSCLRIFAEHFKCG 120
+C C L+K IV L L + + +C ++
Sbjct: 181 ------KCFSCALDK-IVHELYGALNTKQASSSSTSTNRQTGFIYLLTCAWKINQNLAGY 233
Query: 121 RQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQS 180
Q+DAHEF +++I+ H + + L S E I V +F G+L+S
Sbjct: 234 SQQDAHEFWQFIINQIHQS--YVLDLPNAKEVSRANNKQCECI------VHTVFEGSLES 285
Query: 181 QVKCLACGAES-NKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVS 239
+ C C S +D +D+SLDI + L E + F + E L N Y C C
Sbjct: 286 SIVCPGCQNNSKTTIDPFLDLSLDIKDKKKLYECLDSFHKKEQLKDFN-YHCGECNSTQD 344
Query: 240 ARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQDPQPE-- 294
A KQ+ I + P++LV+QLKRFE + G K+D I F L + ++ +D E
Sbjct: 345 AIKQLGIHKLPSVLVLQLKRFEHLLNGSNRKLDDFIEFPTYLNMKNYCSTKEKDKHSENG 404
Query: 295 ------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
Y+L G + H G + + GHY A+ K + G+W+ NDS VS + +EVL E+ Y+L
Sbjct: 405 KVPDIIYELIGIVSHKG-TVNEGHYIAFCKISGGQWFKFNDSIVSSISQEEVLKEQAYLL 463
Query: 349 FF 350
F+
Sbjct: 464 FY 465
>gi|327283671|ref|XP_003226564.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
2 [Anolis carolinensis]
Length = 510
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 132 TWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 191
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P ++ + A H
Sbjct: 192 DRHKC-----------EMQSPSSCLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHL 240
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 241 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 289
Query: 178 LQSQVKCLACGAESNKVDEIMDISLD-------------------------ILNSCSLKE 212
LQS V C C S +D DISLD + + +L +
Sbjct: 290 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGESHVTGTTTLTD 349
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 350 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 409
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 410 YVSFPLELDMTPFMASSKESRMNGQYQQPADSLNNDNKYSLFAVVNHQG-TLESGHYTSF 468
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 469 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 502
>gi|242065518|ref|XP_002454048.1| hypothetical protein SORBIDRAFT_04g023700 [Sorghum bicolor]
gi|241933879|gb|EES07024.1| hypothetical protein SORBIDRAFT_04g023700 [Sorghum bicolor]
Length = 419
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 171/375 (45%), Gaps = 46/375 (12%)
Query: 23 GGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECP 82
G GL N GN+CY NSVLQ L Y P L++ S + L DAE
Sbjct: 63 GERYFGLENFGNTCYCNSVLQALYYCAPFRE--QLLEYYSKNRNLE-----DAEENLLTC 115
Query: 83 FCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR 142
L +I S + AP + +R E+F+ +DAHEFL +++ N +
Sbjct: 116 LADLFSQISASKKKTGVI-APKRFIQMVRKLNEYFRGYMHQDAHEFLNFLL----NEIVD 170
Query: 143 LKKLRRKGGGSSGGGGGGETINGGSSV-----------VKEIFGGALQSQVKCLACGAES 191
+ + S G E ++ G++V V + F G L ++ +CL C +
Sbjct: 171 ILEKESSSAKDSPGTTSPEKVSNGATVDEVRKEPLVTWVHKSFQGTLTNETRCLMCETIT 230
Query: 192 NKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPN 251
K + D+S+DI + SL ++ FF E L+ ++K+ CD C L A K+M I + P
Sbjct: 231 AKDETFFDLSVDIEQNSSLTSCLKNFFSTETLNADDKFFCDKCCSLQEAEKRMKIKKVPQ 290
Query: 252 ILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP--EYKLFGTIVHSGFSPD 309
LVI LKRF+ I +K +++ V L + +S D EY LF +VH G P+
Sbjct: 291 TLVIHLKRFKFIEQLNRNKKLSYRVVYPLELKLSSSSSDAVADCEYSLFAVVVHLGSGPN 350
Query: 310 SGHYYAYIKDAIGRWYCCNDSYVSV---STLQEVL---------SEKVYILFFIRANQRP 357
GHY A IK + W +D V + STLQ ++ YILF+ R
Sbjct: 351 QGHYVAKIK-SHDHWLSFDDDNVEMIPESTLQTFYGSSREYSGNTDHGYILFYER----- 404
Query: 358 VSANG---TFASNGV 369
+ NG T +S+GV
Sbjct: 405 IGGNGDEKTDSSDGV 419
>gi|115446845|ref|NP_001047202.1| Os02g0573400 [Oryza sativa Japonica Group]
gi|46806341|dbj|BAD17530.1| putative ubiquitin-specific protease 3 (UBP3) [Oryza sativa
Japonica Group]
gi|113536733|dbj|BAF09116.1| Os02g0573400 [Oryza sativa Japonica Group]
Length = 415
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 163/367 (44%), Gaps = 47/367 (12%)
Query: 16 LSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDA 75
L + G GL N GN+CY NSVLQ L + P L+ + + + D+ L
Sbjct: 61 LGDHFPEGARYFGLENFGNTCYCNSVLQALYHCIPFREQLLEYYATYKNTEDSEDNLLTC 120
Query: 76 ERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRY---- 131
+ +KR + AP + +R E F+ +DAHEF +
Sbjct: 121 LADLFSQITLAKKRT--------GVLAPKRFVQRVRKQNELFRSYMHQDAHEFWNFLVND 172
Query: 132 VIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGS-------------SVVKEIFGGAL 178
+ID C + SS E NG + ++V F G L
Sbjct: 173 IIDILEEDC--------RTANSSPETTPEEVSNGAANALANGARERPLVTLVHRTFQGIL 224
Query: 179 QSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLV 238
++ KCL C + K + D+S+D+ + SL ++ FF E+L+G +K+ CD C L
Sbjct: 225 TNETKCLMCDTITAKDETFFDLSIDVEQNSSLTSCLKSFFSTEILNGEDKFFCDKCSSLQ 284
Query: 239 SARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLF 298
A K+M I ++P++LVI LKRF+ + K +++ V L + S+D EY LF
Sbjct: 285 EAHKRMKIKKAPHVLVIHLKRFKYVEQLSRHKKLSYRVVYPLELKLGSMSEDADCEYSLF 344
Query: 299 GTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSV---STLQEVL----------SEKV 345
+VH G SP+ GHY + IK + G W +D V + STLQ ++
Sbjct: 345 AVVVHVGSSPNHGHYVSQIK-SHGNWLSFDDDTVQISEESTLQTFYGSSREHCGGNTDHG 403
Query: 346 YILFFIR 352
YILF+ R
Sbjct: 404 YILFYER 410
>gi|392887711|ref|NP_493434.3| Protein USP-3 [Caenorhabditis elegans]
gi|379657283|emb|CAC14423.3| Protein USP-3 [Caenorhabditis elegans]
Length = 550
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/338 (31%), Positives = 160/338 (47%), Gaps = 32/338 (9%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P G+RN+GN+C++N+VLQ L + + L SSL + + E K +C
Sbjct: 228 PRGMRNVGNTCFMNAVLQALASISEFREYIMSL--SSLEDYIHDEK----EPKNGGNYCY 281
Query: 86 L--EKR---IVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTC 140
L E R I +S AP + + F+ RQ D+HEF+RY +D+ H
Sbjct: 282 LTDEYRKLLISQSARSFREPTAPNEFREAFISVCPRFRGFRQHDSHEFMRYFMDSLHT-- 339
Query: 141 LRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDI 200
++K R+ G + + + + F G LQS V C C SNK+DE MD+
Sbjct: 340 -EMRKCRKLPGMP----------DDKHTPISKYFEGTLQSSVICQTCRNCSNKIDEFMDL 388
Query: 201 SLDI-----LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVI 255
SLDI + L + + FF+ E+L+ K +C CK + KQM I + P +L +
Sbjct: 389 SLDIPAQRNASKVRLSDCLSTFFKLEMLEKGEKPECAKCKTKQTCSKQMFIRKLPQVLCL 448
Query: 256 QLKRFEGIFGGKIDKAIAFEE-VLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYY 314
+KRF GGK D I F L ++ F+ S + Y L IVH G+ SGHY
Sbjct: 449 HMKRFRDN-GGKNDAIIDFPMGQLDVTQFLTDDSDEAPCTYSLQSIIVHIGYGCGSGHYI 507
Query: 315 AYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
A+ K GRW+ +D+ V V +K Y+L + +
Sbjct: 508 AFGKRN-GRWFQFDDTVVKGVDEAHVSKQKAYVLLYTK 544
>gi|224143342|ref|XP_002324922.1| predicted protein [Populus trichocarpa]
gi|222866356|gb|EEF03487.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 171/379 (45%), Gaps = 65/379 (17%)
Query: 16 LSEKRKRGGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLKLQHS-SLCKQLTGDS 71
+ ++R + PLGLR NLG++C++NSVLQ L + PP N+ L +H CK+ + D
Sbjct: 93 MMDRRAKSCYPLGLRGLNNLGSTCFMNSVLQALLHAPPFRNYFLSERHDPETCKKRSSDQ 152
Query: 72 ALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRY 131
A C F ++ + S D T +PA+ + + Q+DAHEF
Sbjct: 153 LCLA-----CDFGVIFSAVY---SGDRTPYSPAQFLYSWWQHSANLASYEQQDAHEFFIS 204
Query: 132 VIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAES 191
V+D H R+G S G G + +F G L+S V C CG S
Sbjct: 205 VLDGIHE---------REGKERSSNKDNG----GCQCIAHRVFSGMLRSDVTCTTCGFTS 251
Query: 192 NKVDEIMDISLDILNS------------------CSLKEAMQKFFQPEVLDGNNKYKCDN 233
D +DISL++ + +L + F +PE L + K C N
Sbjct: 252 TTYDPCVDISLNMDTTNFSTVNVANKSVREDTGRSTLLACLDLFTRPERLGSDQKLYCQN 311
Query: 234 CKKLVSARKQMSILQSPNILVIQLKRFEGI----FGGKIDKAIAFEEVLVLSSFMCKA-- 287
C++ + KQMSI + P +L + +KRFE KID + F L ++ ++ +
Sbjct: 312 CQEKRDSLKQMSIKRLPLVLSLHIKRFEHSSLRRSSRKIDWYLQFPFSLDMTPYLSPSIV 371
Query: 288 --------------SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVS 333
D E+++F + HSG DSGHY Y++ +WY C+D++++
Sbjct: 372 RNRFGNRVFGFESDKPDISSEFEIFAVVTHSGML-DSGHYVTYLR-LQNQWYKCDDAWIT 429
Query: 334 VSTLQEVLSEKVYILFFIR 352
+ V + + Y++F+++
Sbjct: 430 EVDERIVRAAQCYMIFYVQ 448
>gi|66534853|ref|XP_395389.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Apis
mellifera]
Length = 502
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 173/390 (44%), Gaps = 71/390 (18%)
Query: 6 ELQMSWQPSLLSEKRKRGGP---------PLGLR---NLGNSCYLNSVLQCLTYTPPLAN 53
E +W+P+ + + R P +GLR NLG++C++N ++Q L +TP L +
Sbjct: 126 EFYRAWEPTQIEAELLRKHPRRRRVVENSTIGLRGLINLGSTCFMNCIVQALIHTPLLRD 185
Query: 54 FCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIF 113
+ L +H C Q T R C L + LTL K+ +
Sbjct: 186 YFLADRHH--CPQPT--------RCLVCEVSHLFQEFYSGSKAPLTLH---KLLHLIWTH 232
Query: 114 AEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEI 173
A H Q+DAHEF +D H C L + + + + ++ +I
Sbjct: 233 ARHLAGYEQQDAHEFFIATLDVLHRHCEAAPILIK------------DNPHHCNCIIDQI 280
Query: 174 FGGALQSQVKCLACGAESNKVDEIMDISLDI------------LNSCSLKEAMQKFFQPE 221
F G LQS V C AC S +D DISLD+ SL + +++F + E
Sbjct: 281 FTGGLQSDVVCQACNGVSTTIDPFWDISLDLGPAASASGSDSSGPPTSLLDCLERFTRAE 340
Query: 222 VLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLV 279
L + K KC NC+ + KQ+++ Q P + LKRFE I KI I+F E L
Sbjct: 341 HLGSSAKIKCSNCQTYQESTKQLTMKQLPIVASFHLKRFEHSSIQDKKISTFISFPEQLD 400
Query: 280 LSSFMCK--------ASQDPQPE-----------YKLFGTIVHSGFSPDSGHYYAYIKDA 320
++ FM A D P+ Y LF I H G S ++GHY A+I+
Sbjct: 401 MTPFMSHRRNGNNNSAMIDGLPKNGEDMAFSDNRYSLFAVINHEG-SLETGHYTAFIRQQ 459
Query: 321 IGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
+W+ C+D ++ + L++VL+ + Y+LF+
Sbjct: 460 RDQWFKCDDHLITRARLKDVLTSEGYLLFY 489
>gi|380022381|ref|XP_003695028.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 22-like [Apis florea]
Length = 502
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 173/390 (44%), Gaps = 71/390 (18%)
Query: 6 ELQMSWQPSLLSEKRKRGGP---------PLGLR---NLGNSCYLNSVLQCLTYTPPLAN 53
E +W+P+ + + R P +GLR NLG++C++N ++Q L +TP L +
Sbjct: 126 EFYRAWEPTQIEAELLRKHPRRRRVVENSTIGLRGLINLGSTCFMNCIVQALIHTPLLRD 185
Query: 54 FCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIF 113
+ L +H C Q T R C L + LTL K+ +
Sbjct: 186 YFLADRHH--CPQPT--------RCLVCEVSHLFQEFYSGSKAPLTLH---KLLHLIWTH 232
Query: 114 AEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEI 173
A H Q+DAHEF +D H C L + + + + ++ +I
Sbjct: 233 ARHLAGYEQQDAHEFFIATLDVLHRHCEAAPILIK------------DNPHHCNCIIDQI 280
Query: 174 FGGALQSQVKCLACGAESNKVDEIMDISLDI------------LNSCSLKEAMQKFFQPE 221
F G LQS V C AC S +D DISLD+ SL + +++F + E
Sbjct: 281 FTGGLQSDVVCQACNGVSTTIDPFWDISLDLGPAASASGSDSSGPPTSLLDCLERFTRAE 340
Query: 222 VLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLV 279
L + K KC NC+ + KQ+++ Q P + LKRFE I KI I+F E L
Sbjct: 341 HLGSSAKIKCSNCQTYQESTKQLTMKQLPIVASFHLKRFEHSSIQDKKISTFISFPEQLD 400
Query: 280 LSSFMCK--------ASQDPQPE-----------YKLFGTIVHSGFSPDSGHYYAYIKDA 320
++ FM A D P+ Y LF I H G S ++GHY A+I+
Sbjct: 401 MTPFMSHRRNGNNNSAMIDGLPKNGEDMAFSDNRYSLFAVINHEG-SLETGHYTAFIRQQ 459
Query: 321 IGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
+W+ C+D ++ + L++VL+ + Y+LF+
Sbjct: 460 RDQWFKCDDHLITRARLKDVLTSEGYLLFY 489
>gi|326427127|gb|EGD72697.1| hypothetical protein PTSG_04426 [Salpingoeca sp. ATCC 50818]
Length = 1574
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 158/339 (46%), Gaps = 26/339 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLT--GDSALDAERKRECPFCI 85
GL+NLGN+CY+N+VLQCL +T LA + ++ ++ + + + G AE E +
Sbjct: 1241 GLKNLGNTCYMNAVLQCLAHTKQLATYFVQKRYRNHLNRRSKFGCKGEVAEELAEL-LTV 1299
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL-- 143
L R R LS P+ + + F Q+D EF ++D H R+
Sbjct: 1300 LTSRQYRHLS-------PSMFKEVFASYCPQFAGYDQQDCQEFASMLLDKLHEDLNRVVA 1352
Query: 144 ----KKLRRKGGGS--SGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEI 197
K L G + +G + I +S++ ++F G +S +C C ES
Sbjct: 1353 KPPAKDLDLSGMDAVRAGNEAWKQCIARDNSIITDLFQGQFRSVTRCNTCRYESATYSPF 1412
Query: 198 MDISLDI--LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVI 255
+SL + SL ++ F + E + GNN++KC CK A K M I + P L+I
Sbjct: 1413 TSLSLPVPPHGRYSLHHCIRLFSRQENMTGNNQWKCPKCKAYRDAIKFMGIWRLPRCLLI 1472
Query: 256 QLKR--FEGIFGGKIDKAIAFEEVLVL--SSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
LKR F G F KI+ I F + L L M + + + Y L+ H G + G
Sbjct: 1473 HLKRFYFNGPFRDKINTMIDFPQNLQLGKDDVMSFSRPEQRENYSLYAVANHYG-TLTGG 1531
Query: 312 HYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HY A+ K A GRW +DS VS Q+V++ Y+LF+
Sbjct: 1532 HYIAFAKHA-GRWEKYDDSVVSPMAPQQVVTPAAYVLFY 1569
>gi|51593607|gb|AAH80737.1| Ubiquitin specific peptidase 22 [Mus musculus]
Length = 525
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 171/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C+++ ++Q LT+TP L +F L
Sbjct: 147 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMDCIVQALTHTPLLRDFFLS 206
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 207 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 255
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 256 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 304
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 305 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGESHASGTTTLTD 364
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 365 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 424
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 425 YVSFPLELDMTPFMASSKESRMNGQYQQPLDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 483
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 484 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 517
>gi|219113607|ref|XP_002186387.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583237|gb|ACI65857.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 347
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 171/350 (48%), Gaps = 30/350 (8%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCIL 86
+GL NLGNSC+LN+ +QCL + PL + L+ +L ++ L + + L
Sbjct: 4 VGLHNLGNSCFLNATIQCLNHIEPLTQYFLQ---GKYLDELNRNNPLGSGGNVAMSYASL 60
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
K++ + + P ++ + FA F Q D+ EF ++++D H R++
Sbjct: 61 LKKM---WGGEYSTLVPRLLKQTVASFAPQFDNCYQHDSQEFGQFLMDGLHEDLNRVQTK 117
Query: 147 ----RRKGGGSSGGGGGGETINGG----SSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+G G E+ S++ + G +S + C CG ES K D
Sbjct: 118 PYVEELEGLGMPDDQAAIESWRKHLLRHDSIIVDHCQGMHRSHLTCPRCGRESIKFDIFS 177
Query: 199 DISLDIL-----NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
IS+ + ++ L++ ++KF + E LD N + C C++ V A K +++ P+IL
Sbjct: 178 SISVPLACTKQKSAIQLQDCLEKFMEGEQLDERNAWYCPKCRQHVCALKMIALWTIPDIL 237
Query: 254 VIQLKRFE--------GIFGGKIDKAIAFE-EVLVLSSFMC-KASQDPQPEYKLFGTIVH 303
+I LKRF + K+D + F E L L+ ++ D P Y+LFG H
Sbjct: 238 IIHLKRFTFDTCMASGHMLRSKVDDKVEFPIEGLDLTKYILGPVDPDAPPVYRLFGVSEH 297
Query: 304 SGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
+G + +SGHY A ++++I G+WY CNDS+V ++ + ++ Y+LF+ R
Sbjct: 298 TGPTANSGHYTATVRNSIDGQWYRCNDSHVGRTSGEASITGGAYVLFYQR 347
>gi|164658850|ref|XP_001730550.1| hypothetical protein MGL_2346 [Malassezia globosa CBS 7966]
gi|159104446|gb|EDP43336.1| hypothetical protein MGL_2346 [Malassezia globosa CBS 7966]
Length = 650
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 172/376 (45%), Gaps = 55/376 (14%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTG-DSALDAERK-RECPFC 84
LG+ N GNSCY NSVLQ L Y P + + + S L L +E+ P
Sbjct: 106 LGMENFGNSCYANSVLQALYYCKPFRDAVMSVDKSPHPSPLPSLQDGLASEKTLASTPVS 165
Query: 85 ILEKRIVRSL-------SVDLT-------------LDAPAKIQS-----CLRIFAEH--- 116
+ K + +L SV L+ L+APA + L++F
Sbjct: 166 MNMKDALAALFHSIALASVRLSADASNGRIHSSSMLEAPAILSQNVDAGALKMFLSTLHQ 225
Query: 117 ----FKCGRQEDAHEFLRYVIDACHNTCL-----RLKKLRRKGGGSSGGGGGGETINGGS 167
F DAHEFL ++++ + R ++ R + T+
Sbjct: 226 NCNLFDSSMHHDAHEFLNFILNQVGQNLMDKRKRRSQRAREQSFTPLTPSFSSPTVKDHP 285
Query: 168 SVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNN 227
+ + ++F G L ++ +CL+C +N+ +E +D+S+++ + S+ ++++F + E+L G N
Sbjct: 286 TYIHKLFQGVLTNETRCLSCETITNRDEEFLDLSINVEANTSVSSSLRQFSESEMLSGRN 345
Query: 228 KYKCDNCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKA--IAFEEVLVLSSF 283
K+ CD C L A K+M I Q PNIL + LKRF + + + A + F + L +
Sbjct: 346 KFYCDTCSSLQEAEKRMKIKQPPNILALHLKRFKWDDMRQAYVKHACRVVFPLNMRLFNT 405
Query: 284 MCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCND---SYVSVSTLQE 339
+A+Q P Y LFG +VH G GHY + IK IG RW +D +++ S + +
Sbjct: 406 THQATQ-PDQLYDLFGIVVHIGSGAHQGHYVSIIK--IGARWAIFDDEDVTFIPESDIPK 462
Query: 340 VLSE-----KVYILFF 350
+ Y+LF+
Sbjct: 463 YFGDAPEVGSAYVLFY 478
>gi|225430521|ref|XP_002283376.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Vitis
vinifera]
Length = 553
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 183/398 (45%), Gaps = 69/398 (17%)
Query: 1 MGLAHELQMSWQPSLLS--EKRKRGGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFC 55
+GL EL+ L+S ++R + PLGLR NLGN+C++NSVLQ L + PPL N+
Sbjct: 148 LGLGLELEWKRSKRLISMADRRAKSIFPLGLRGLNNLGNTCFMNSVLQALFHAPPLRNYF 207
Query: 56 LKLQHSSL-CKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFA 114
L +H+ C++ + D R C C ++ S D T +PA+ +
Sbjct: 208 LSDRHNRQSCRRRSSD--------RLCLPCDIDVIFSAVFSGDRTPYSPARFLYSWWQHS 259
Query: 115 EHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIF 174
E+ Q+DAHEF ++D H K G S G + + + F
Sbjct: 260 ENLASYEQQDAHEFFISMLDQIH----------VKEGKS---GNQDKDNRDCQCIAHKAF 306
Query: 175 GGALQSQVKCLACGAESNKVDEIMDISLDI-LNSC-------------------SLKEAM 214
G L+S V C CG S D +DISL++ ++ C +L +
Sbjct: 307 SGLLRSDVTCTTCGFTSTTYDPCVDISLNLDMSFCPSTGMTNRTTKPNENAIISTLLGCL 366
Query: 215 QKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI----FGGKIDK 270
F +PE L + K C NC++ ++ KQMSI + P +L + +KRFE KID+
Sbjct: 367 DLFTRPEKLGPDQKLYCQNCQERRNSLKQMSIRRLPIVLCLHIKRFEHSTIRKMSRKIDQ 426
Query: 271 AIAFEEVLVLSSFMCKA----------------SQDPQPEYKLFGTIVHSGFSPDSGHYY 314
+ F L ++ ++ + + E+++F + HSG +SGHY
Sbjct: 427 YLQFPFSLDMTPYLSSSIVRNRFGNRIFTFEGDESETCTEFEVFAVVTHSGML-ESGHYV 485
Query: 315 AYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
Y++ RWY C+D++++ V + + Y++++++
Sbjct: 486 TYVR-VRNRWYKCDDAWITEVDEGVVRASQCYLMYYVQ 522
>gi|195157880|ref|XP_002019822.1| GL12603 [Drosophila persimilis]
gi|194116413|gb|EDW38456.1| GL12603 [Drosophila persimilis]
Length = 901
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 165/335 (49%), Gaps = 24/335 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CY+NS+LQCL+ TP L +CL ++ + ++ + + + E I E
Sbjct: 564 GLKNLGNTCYMNSILQCLSNTPQLTEYCLSDKYKNY---ISRSNKTNGQVIEEVAALIKE 620
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ V A ++S + + F+ Q+D+HEFL ++D H+ L R
Sbjct: 621 LWNGQYKCV-----ASRDLRSVVGQYQNIFRGVDQQDSHEFLTILMDWLHSDLQTLDVSR 675
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI--- 204
+ + + S++ +F G ++S VKC+ C ES + ++SL++
Sbjct: 676 MRETIGAAEQAWLDFTKAKESIILHLFYGQMKSTVKCVTCNKESATYECFSNLSLELPPN 735
Query: 205 LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF---- 260
N C L + M +F E + G N C NCK +A K++ I + P +LV+ LKRF
Sbjct: 736 ANECQLNQCMDMYFSGERIQGWN---CPNCKTKRAAIKKLDISKLPPVLVVHLKRFYADT 792
Query: 261 --EGIFGGKIDKAIAFEEVLVLSSFMCKA-SQDPQPE-YKLFGTIVHSGFSPDSGHYYAY 316
G + K + + L +S ++ +A S+ +P+ Y+L+ H G + + GHY A+
Sbjct: 793 SNTGSYAKKQNFLSFPLQNLEMSPYIARAESRAAKPKTYQLYAVSNHYG-TMEGGHYTAF 851
Query: 317 IKDA-IGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
K GRWY +D VS V+S YILF+
Sbjct: 852 CKSPNYGRWYKFDDQVVSTLDTSNVISSAAYILFY 886
>gi|67968614|dbj|BAE00666.1| unnamed protein product [Macaca fascicularis]
Length = 435
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 169/369 (45%), Gaps = 64/369 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFC--------LKLQHSSLCKQLT------GDSAL 73
GLRNLGN+C++N++LQ L+ + FC ++L++ + T GD+ +
Sbjct: 75 GLRNLGNTCFMNAILQSLS---NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNV 131
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
+ C L + + S + KI +F+ +Q+DAHEF+RY++
Sbjct: 132 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMP-------NFRGYQQQDAHEFMRYLL 184
Query: 134 DACHNTCLRLKKLRRKGG------------GSSGGGGGGETINGGSSVVKEIFGGALQSQ 181
D H L +GG S+ ING S+VV IFGG LQ++
Sbjct: 185 DHLH--------LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNE 236
Query: 182 VKCLACGAESNKVDEIMDISLDILNS--------------CSLKEAMQKFFQPEVLDGNN 227
V CL CG ES K D +D+SLDI + CSL++ ++ F E LD
Sbjct: 237 VNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETE 296
Query: 228 KYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFM 284
Y C CKK + K+ I + P +L + LKRF K+D + F L + ++
Sbjct: 297 LYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYL 356
Query: 285 CKASQDPQPE--YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS 342
+ Y L +VH G SGHY AY GRW+ NDS V+++ + V+
Sbjct: 357 LEPENSGLESCLYDLAAVVVHHGSGVGSGHYTAYATHE-GRWFHFNDSTVTLTDEETVVK 415
Query: 343 EKVYILFFI 351
K YILF++
Sbjct: 416 AKAYILFYV 424
>gi|332018399|gb|EGI58993.1| Ubiquitin carboxyl-terminal hydrolase 2 [Acromyrmex echinatior]
Length = 749
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/350 (32%), Positives = 175/350 (50%), Gaps = 28/350 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRN+GN+C++NSV+QCL+ T PL + L Q+ L T S++ + E
Sbjct: 411 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQY--LTDINTTTSSMKGALIKAFSQVTHE 468
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL-KKL 146
+ + D ++ A ++S ++ FA F Q+DA EFLRY+++ H R+ KL
Sbjct: 469 ---LWEVGGDHVVNTTA-LKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTTKL 524
Query: 147 RRKGGG--------SSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
G + S + ++F G L+S ++C +C S +D
Sbjct: 525 PPIHGDIPDSYTDMQKAVESWKRYLRSEDSTIVDVFVGQLRSSLRCTSCDHVSVTLDPFW 584
Query: 199 DISLDI---LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVI 255
D+SL I + L + ++ F + EVLDG+ K C C+ K SI + P ILVI
Sbjct: 585 DLSLPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVI 644
Query: 256 QLKRFEGI--FGGKIDKAIAFEEV-LVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGH 312
LKRF + F GK++ + F L LS+F A + P Y L+G HSG + SGH
Sbjct: 645 HLKRFSPMERFRGKLNVMVDFPLTGLDLSAF--AAPRVPGCTYNLYGVANHSG-TTYSGH 701
Query: 313 YYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSAN 361
Y AY K G W+ NDS VSV + + V+S + Y+LF+ Q+P S++
Sbjct: 702 YTAYCKHPYSGEWHEYNDSRVSVVSSRSVVSSEAYVLFY---EQQPHSSH 748
>gi|198455403|ref|XP_001359977.2| GA19137, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198133229|gb|EAL29129.2| GA19137, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 901
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 165/335 (49%), Gaps = 24/335 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CY+NS+LQCL+ TP L +CL ++ + ++ + + + E I E
Sbjct: 564 GLKNLGNTCYMNSILQCLSNTPQLTEYCLSDKYKNY---ISRSNKTNGQVIEEVAALIKE 620
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ V A ++S + + F+ Q+D+HEFL ++D H+ L R
Sbjct: 621 LWNGQYKCV-----ASRDLRSVVGQYQNIFRGVDQQDSHEFLTILMDWLHSDLQTLDVSR 675
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI--- 204
+ + + S++ +F G ++S VKC+ C ES + ++SL++
Sbjct: 676 MRETIGAAEQAWLDFTKAKESIILHLFYGQMKSTVKCVTCNKESATYECFSNLSLELPPN 735
Query: 205 LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF---- 260
N C L + M +F E + G N C NCK +A K++ I + P +LV+ LKRF
Sbjct: 736 ANECQLNQCMDMYFSGERIQGWN---CPNCKTKRAAIKKLDISKLPPVLVVHLKRFYADT 792
Query: 261 --EGIFGGKIDKAIAFEEVLVLSSFMCKA-SQDPQPE-YKLFGTIVHSGFSPDSGHYYAY 316
G + K + + L +S ++ +A S+ +P+ Y+L+ H G + + GHY A+
Sbjct: 793 SNTGSYAKKQNFLSFPLQNLEMSPYIARAESRAAKPKTYQLYAVSNHYG-TMEGGHYTAF 851
Query: 317 IKDA-IGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
K GRWY +D VS V+S YILF+
Sbjct: 852 CKSPNYGRWYKFDDQVVSTLDTSNVISSAAYILFY 886
>gi|301604742|ref|XP_002932001.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Xenopus
(Silurana) tropicalis]
Length = 185
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 115/189 (60%), Gaps = 13/189 (6%)
Query: 83 FCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR 142
C+++ I +LS + P+ + + LR +++F+ G QEDAHEFLRY +D +CLR
Sbjct: 2 MCVMQTHISMALSNSGGVIKPSAVVNDLRRISKNFRYGSQEDAHEFLRYTVDEMQKSCLR 61
Query: 143 LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISL 202
G + ++++ ++FGG L+S+V CL+C A S+ D+ +D++L
Sbjct: 62 -------------GSCRLDRHTQATTLIHQVFGGYLRSRVTCLSCKAVSDTYDQYLDLTL 108
Query: 203 DILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEG 262
+I + S+ +A+++F +PE LDG+N YKC CK++V+A K+ +I ++ N+L + LKRF
Sbjct: 109 EIKMAHSVNQALEQFVRPEQLDGDNAYKCSKCKQMVTASKRFTIHRTSNVLTLSLKRFAS 168
Query: 263 IFGGKIDKA 271
GGK+ K
Sbjct: 169 FNGGKLSKV 177
>gi|426244688|ref|XP_004016152.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 1 [Ovis
aries]
gi|426244690|ref|XP_004016153.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 2 [Ovis
aries]
Length = 606
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 28/340 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L +AL E F L
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSSRAHTALMEE------FAKL 322
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL--- 143
+ I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN R+
Sbjct: 323 IQTIWTSSPNDVV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTAR 380
Query: 144 -----KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ L G + + S + ++F G L+S + C CG S D
Sbjct: 381 PKSNTENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFW 440
Query: 199 DISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
D+SL I +L + M+ F + +VLDG+ K C +C+ K+ SI + P ILV
Sbjct: 441 DLSLPITKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCHCRARKRCIKKFSIQRFPKILV 500
Query: 255 IQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
+ LKRF I K+ + F L L F + + Y L+ HSG + G
Sbjct: 501 LHLKRFSESRIRTSKLTAFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMGG 557
Query: 312 HYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HY AY + + G W+ NDS VS + +V + Y+LF+
Sbjct: 558 HYTAYCRSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLFY 597
>gi|402223712|gb|EJU03776.1| cysteine proteinase [Dacryopinax sp. DJM-731 SS1]
Length = 434
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 170/369 (46%), Gaps = 51/369 (13%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CY+N+ LQCL+ T P A F L+ + + + + L + F
Sbjct: 72 GLKNLGNTCYMNAPLQCLSATVPFARFFLE---NRWQRAVNTVNPLGTRGQLAGAFA--- 125
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL---- 143
K + + T P + + +A F G Q DA EF+ +++D H R+
Sbjct: 126 KMVQEMWQANFTYLDPTNFRRSVCHYAPSFAGGDQHDAQEFISFLLDGLHEDLNRILQKP 185
Query: 144 ----------KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNK 193
+L R +G S+V + F G +++++C+ C S
Sbjct: 186 ANDDPTPEHEAELERLPQQIAGEQEWQRYQRRDDSLVVDYFQGQFRNKLECMTCHKTSTT 245
Query: 194 VDEIMDISLDI-----LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQ 248
+ M +SL I ++ +L++ M F + E+++ + +KC +C L A KQ+SI +
Sbjct: 246 YNAFMYLSLPIPTGRGMSKVTLQQCMDAFVKEEIMEKGDAWKCPHCMALRKATKQLSISR 305
Query: 249 SPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKA------------------ 287
P +L+I LKRF +G F K++ + F + L L+++M
Sbjct: 306 LPPVLLIHLKRFSYKGPFVDKLETLVDFPLKDLDLTNYMPSPLPPGVDKGFSQSSPIKLD 365
Query: 288 ---SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK 344
SQ P Y+L+ H G S SGHY A+I G W C+DS +S + +E++++
Sbjct: 366 DPRSQIPPYRYELYAVTNHFG-SLTSGHYTAFIASK-GSWVYCDDSRLSNAEGREIVAKP 423
Query: 345 VYILFFIRA 353
YILF+ R
Sbjct: 424 AYILFYKRV 432
>gi|340724718|ref|XP_003400728.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Bombus
terrestris]
gi|350398221|ref|XP_003485124.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Bombus
impatiens]
Length = 502
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 173/390 (44%), Gaps = 71/390 (18%)
Query: 6 ELQMSWQPSLLSEKRKRGGP---------PLGLR---NLGNSCYLNSVLQCLTYTPPLAN 53
E SW+P+ + + R P +GLR NLG++C++N ++Q L +TP L +
Sbjct: 126 EFYRSWEPTQIEAELLRKHPRRRRVVENSTIGLRGLINLGSTCFMNCIVQALIHTPLLRD 185
Query: 54 FCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIF 113
+ L +H C Q T R C L + LTL K+ +
Sbjct: 186 YFLADRHH--CPQPT--------RCLVCEVSHLFQEFYSGSKAPLTLH---KLLHLIWTH 232
Query: 114 AEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEI 173
A H Q+DAHEF +D H C L + + + + ++ +I
Sbjct: 233 ARHLAGYEQQDAHEFFIATLDVLHRHCEAAPILVK------------DNPHHCNCIIDQI 280
Query: 174 FGGALQSQVKCLACGAESNKVDEIMDISLDI------------LNSCSLKEAMQKFFQPE 221
F G LQS V C AC S +D DISLD+ SL + +++F + E
Sbjct: 281 FTGGLQSDVVCQACNGVSTTIDPFWDISLDLGPAASASGSDSSGPPTSLLDCLERFTRAE 340
Query: 222 VLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLV 279
L + K KC NC+ + KQ+++ Q P + LKRFE I KI I+F E L
Sbjct: 341 HLGSSAKIKCSNCQTYQESTKQLTMKQLPIVASFHLKRFEHSSIQDKKICTFISFPEQLD 400
Query: 280 LSSFMCK--------ASQDPQPE-----------YKLFGTIVHSGFSPDSGHYYAYIKDA 320
++ FM A D P+ Y LF I H G S ++GHY A+I+
Sbjct: 401 MTPFMSHRRNGNNNSAMIDGLPKNGEDMAFSDNRYSLFAVINHEG-SLETGHYTAFIRQQ 459
Query: 321 IGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
+W+ C+D ++ + L++VL+ + Y+LF+
Sbjct: 460 RDQWFKCDDHLITRARLKDVLTSEGYLLFY 489
>gi|307207001|gb|EFN84824.1| Ubiquitin carboxyl-terminal hydrolase 22 [Harpegnathos saltator]
Length = 502
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 172/390 (44%), Gaps = 71/390 (18%)
Query: 6 ELQMSWQPSLLSEKRKRGGP---------PLGLR---NLGNSCYLNSVLQCLTYTPPLAN 53
E +W+P+ + + R P +GLR NLG++C++N ++Q L +TP L +
Sbjct: 126 EFYRAWEPTQIETELLRKHPRRRRVAENSTIGLRGLINLGSTCFMNCIVQALIHTPLLRD 185
Query: 54 FCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIF 113
+ L +H C Q T R C L + LTL K+ +
Sbjct: 186 YFLADRHH--CPQPT--------RCLVCEVSHLFQEFYSGSKAPLTLH---KLLHLIWTH 232
Query: 114 AEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEI 173
A H Q+DAHEF +D H C L + + + + ++ +I
Sbjct: 233 ARHLAGYEQQDAHEFFIATLDVLHRHCEAAPILVK------------DNPHHCNCIIDQI 280
Query: 174 FGGALQSQVKCLACGAESNKVDEIMDISLDILNSC------------SLKEAMQKFFQPE 221
F G LQS V C AC S +D DISLD+ + SL + +++F + E
Sbjct: 281 FTGGLQSDVVCQACNGVSTTIDPFWDISLDLGPAAGASGSDASGPPTSLLDCLERFTRAE 340
Query: 222 VLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLV 279
L K KC NC+ + KQ+++ Q P + LKRFE I KI I+F E L
Sbjct: 341 HLGSTAKIKCSNCQTYQESTKQLTMKQLPIVASFHLKRFEHSSIQDKKISTFISFPEQLD 400
Query: 280 LSSFM----------------CKASQD---PQPEYKLFGTIVHSGFSPDSGHYYAYIKDA 320
++ FM K +D Y LF I H G S ++GHY A+I+
Sbjct: 401 MTPFMSHKRNGNNNSAMVDGLSKNGEDMTFSDNRYSLFAVINHEG-SLETGHYTAFIRQQ 459
Query: 321 IGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
+W+ C+D ++ + L++VL+ + Y+LF+
Sbjct: 460 RDQWFKCDDHLITRARLKDVLTSEGYLLFY 489
>gi|406602917|emb|CCH45581.1| Ubiquitin carboxyl-terminal hydrolase [Wickerhamomyces ciferrii]
Length = 358
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 168/337 (49%), Gaps = 49/337 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
G N+G++C+++SVLQ + + P + N+ + H K K EC C ++
Sbjct: 54 GFVNMGSTCFMSSVLQTIIHNPIIRNYFMSEGHIDCLK-----------GKNECITCCVD 102
Query: 88 KRIVRSLSVDLT--------LDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNT 139
+ I + + T L A K L ++E +DAHEF +++++ H+
Sbjct: 103 EIITDFFTSNKTSGFGPTSLLSAAWKSNKSLAGYSE-------QDAHEFWQFLVNELHH- 154
Query: 140 CLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMD 199
G +SG T + VV + F LQS + CL CG +N D ++D
Sbjct: 155 -----------GLTSGDNHNSSTCD---CVVHKAFSSDLQSSITCLECGNITNATDPMID 200
Query: 200 ISLDIL-NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLK 258
+SL+I + ++ + ++ F Q E LD KY C C + +A KQ+SIL+ PN+L +QLK
Sbjct: 201 LSLEISGQNDNVVDCLRNFTQTEQLDI--KYSCSKCNQRTNATKQLSILKFPNVLSLQLK 258
Query: 259 RFEGIFGG-KIDKAIAFEEVLVLSSFMCKASQDPQP---EYKLFGTIVHSGFSPDSGHYY 314
RF+ KI+ I F + +S F ++ PQ Y+LF + H G S ++GHY
Sbjct: 259 RFKHNNQSIKIESFIKFPMFINMSEFATISNNVPQAGALNYELFAVVCHIG-SVNTGHYI 317
Query: 315 AYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 351
IK+ G+W+ +DS V++ ++V + Y+LF++
Sbjct: 318 TVIKNNEGKWFRFDDSVVTLLEWEQVSKLQAYLLFYM 354
>gi|190408449|gb|EDV11714.1| ubiquitin carboxyl-terminal hydrolase 8 [Saccharomyces cerevisiae
RM11-1a]
gi|256271624|gb|EEU06666.1| Ubp8p [Saccharomyces cerevisiae JAY291]
gi|259148808|emb|CAY82053.1| Ubp8p [Saccharomyces cerevisiae EC1118]
gi|323303444|gb|EGA57239.1| Ubp8p [Saccharomyces cerevisiae FostersB]
gi|323332143|gb|EGA73554.1| Ubp8p [Saccharomyces cerevisiae AWRI796]
gi|323336055|gb|EGA77329.1| Ubp8p [Saccharomyces cerevisiae Vin13]
gi|323347039|gb|EGA81315.1| Ubp8p [Saccharomyces cerevisiae Lalvin QA23]
gi|323353165|gb|EGA85465.1| Ubp8p [Saccharomyces cerevisiae VL3]
Length = 471
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 169/362 (46%), Gaps = 46/362 (12%)
Query: 14 SLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSAL 73
+++ +R G GL N+G++C+++S+LQCL + P + HS+ CK + D
Sbjct: 125 TMVPSMERRDGLS-GLINMGSTCFMSSILQCLIHNPYFIRHSMSQIHSNNCKVRSPD--- 180
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAK-------------IQSCLRIFAEHFKCG 120
+C C L+K IV L L + + +C ++
Sbjct: 181 ------KCFSCALDK-IVHELYGALNTKQASSSSTSTNRQTGFIYLLTCAWKINQNLAGY 233
Query: 121 RQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQS 180
Q+DAHEF +++I+ H + + L S E I V +F G+L+S
Sbjct: 234 SQQDAHEFWQFIINQIHQS--YVLDLPNAKEVSRANNKQCECI------VHTVFEGSLES 285
Query: 181 QVKCLACGAES-NKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVS 239
+ C C S +D +D+SLDI + L E + F + E L N Y C C
Sbjct: 286 SIVCPGCQNNSKTTIDPFLDLSLDIKDKKKLYECLDSFHKKEQLKDFN-YHCGECNSTQD 344
Query: 240 ARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQDPQPE-- 294
A KQ+ I + P++LV+QLKRFE + G K+D I F L + ++ +D E
Sbjct: 345 AIKQLGIHKLPSVLVLQLKRFEHLLNGSNRKLDDFIEFPTYLNMKNYCSTKEKDKHSENG 404
Query: 295 ------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
Y+L G + H G + + GHY A+ K + G+W+ NDS VS + EVL E+ Y+L
Sbjct: 405 KVPDIIYELIGIVSHKG-TVNEGHYIAFCKISGGQWFKFNDSMVSSISQAEVLKEQAYLL 463
Query: 349 FF 350
F+
Sbjct: 464 FY 465
>gi|34365073|emb|CAE45893.1| hypothetical protein [Homo sapiens]
Length = 453
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 170/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 75 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 134
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 135 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 183
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 184 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 232
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 233 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGESHVSGTTTLTD 292
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + KC C + KQ+++ + P + LKRFE KI
Sbjct: 293 CLRRFTRPEHLGSSATIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 352
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 353 YVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 411
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 412 IRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 445
>gi|321477460|gb|EFX88419.1| hypothetical protein DAPPUDRAFT_305599 [Daphnia pulex]
Length = 513
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 176/405 (43%), Gaps = 77/405 (19%)
Query: 1 MGLAHELQMSWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYT 48
+GL ++ SW+PS LL + +R +GLR NLGN+C++N ++Q L
Sbjct: 123 LGLG-QVYHSWEPSEEEIELLKKHTRRKKITDSATIGLRGLVNLGNTCFMNCIVQALLKV 181
Query: 49 PPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQS 108
P L +F L +H +C+ E R C C + + S + AP +
Sbjct: 182 PLLRDFFLSDRH--ICQ-------FQDEPSR-CLVCEISRLFQEFYSGN---KAPLTLHR 228
Query: 109 CLRIF---AEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETING 165
L + A H Q+DAHEF +D H C R ++N
Sbjct: 229 LLHLIWTHARHLAGYEQQDAHEFFIATLDVLHRHC-------RGPNEQQSTQPQENSVNR 281
Query: 166 GSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS----------------CS 209
+ ++ +IF G LQS V C AC S VD DISLD+ S S
Sbjct: 282 CTCIIDQIFTGGLQSDVVCQACHGVSTTVDPFWDISLDLGPSPSTKVVTTGNGPGSIPTS 341
Query: 210 LKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGK 267
L++ +++F + E L + K KC C + KQ+++ + P + LKRFE F K
Sbjct: 342 LQDCLERFTRAEHLGSSAKIKCSRCLSYQESTKQLTMKKLPVVASFHLKRFEHSNRFHKK 401
Query: 268 IDKAIAFEEVLVLSSFMCKA--------SQDP--------------QPEYKLFGTIVHSG 305
I IAF E L +S FM S P + Y LF I H G
Sbjct: 402 ISSFIAFPEYLDMSPFMSHRRNINNNVNSDSPDRSDRPVHKPLISTENMYSLFAVINHVG 461
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
+ ++GHY AYI+ W+ C+D ++ + +++VL + Y+LF+
Sbjct: 462 -TIEAGHYTAYIRQHRDHWFKCDDHLITKADIRDVLQSEGYLLFY 505
>gi|307204808|gb|EFN83366.1| Ubiquitin carboxyl-terminal hydrolase 3 [Harpegnathos saltator]
Length = 550
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 172/367 (46%), Gaps = 56/367 (15%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA-----------LDA 75
+GLRNLGN+C++N VLQ +++FC L + + D A +
Sbjct: 190 VGLRNLGNTCFMNVVLQSFN---NISHFCEYLTQMPCLEGIAFDEASLEPPTHRGRIVTP 246
Query: 76 ERKRECPFC-ILEKRIVRSLSVDLTL---DAPAKIQSCLRI----FAEHFKCGRQEDAHE 127
R +E L +R + + L+L + A CL + F+ +Q+DAHE
Sbjct: 247 GRAKEMSMSDALLAEELRKVLLGLSLGGSNGQAISPECLFLAIWKVVPRFRGYQQQDAHE 306
Query: 128 FLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLAC 187
FL Y++D H L+L L R G G + G S+V +FGG L S V C+ C
Sbjct: 307 FLTYMLDRLHTELLQL--LPRLGHEPPG-------LRGKQSIVTAVFGGTLLSVVHCMNC 357
Query: 188 GAESNKVDEIMDISLDILNS-----------CSLKEAMQKFFQPEVLDGNNKYKCDNCKK 236
+S + D+SLDI + CSL ++ +FF+ E L + Y CDNC
Sbjct: 358 RTDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLTYSLTRFFKVEELADSELYFCDNCMG 417
Query: 237 LVSARKQMSILQSPNILVIQLKRFEGI--FGGKIDKAIAFE-EVLVLSSFMCK------- 286
+ K+ I + PN+L + +KRF + K+D + F E L +S+F +
Sbjct: 418 KQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMESLDMSAFTVRGMTGTRL 477
Query: 287 ASQDPQPEYKLFGTIVHSGFSPDSGHYYAY-IKDAIGRWYCCNDSYVSVSTLQEVLSEKV 345
+Q+ Y L IVH G +GHY A+ + D G+W+ NDS V ++ + V K
Sbjct: 478 GAQNSH-LYDLAAVIVHHGSGAGTGHYTAFAVHD--GQWFHFNDSSVRPASTESVAKCKP 534
Query: 346 YILFFIR 352
YILF++R
Sbjct: 535 YILFYVR 541
>gi|354504737|ref|XP_003514430.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 4
[Cricetulus griseus]
Length = 396
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 163/340 (47%), Gaps = 28/340 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L +AL E F L
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSNAHTALMEE------FAKL 112
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL--- 143
+ I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN R+
Sbjct: 113 IQTIWTSSPNDVV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVR 170
Query: 144 -----KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ L G + + S + ++F G L+S + C CG S D
Sbjct: 171 PKPSPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFW 230
Query: 199 DISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
D+SL I +L + M+ F + +VLDG+ K C C+ K+ S+ + P ILV
Sbjct: 231 DLSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCYRCRARKRCIKKFSVQRFPKILV 290
Query: 255 IQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
+ LKRF I K+ + F L L F + + Y L+ HSG + G
Sbjct: 291 LHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMGG 347
Query: 312 HYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HY AY + + G W+ NDS V+ + +V + Y+LF+
Sbjct: 348 HYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 387
>gi|348545019|ref|XP_003459978.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Oreochromis niloticus]
Length = 394
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 162/340 (47%), Gaps = 27/340 (7%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCIL 86
+GL+NLGN+C++NS+LQCL+ T L ++CL H+S + L +S + E I
Sbjct: 58 VGLKNLGNTCFMNSILQCLSNTQSLRDYCL---HNSHRRDLNNNSRTNTALMEEFAKLIQ 114
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
S + +IQ +A F Q+DA EFLR+++D HN R+ +
Sbjct: 115 TMWTSSSSEAVSPSEFKTQIQR----YAPRFVGYNQQDAQEFLRFLLDGLHNEVNRV-TV 169
Query: 147 RRKG---------GGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEI 197
R +G G + + S + ++F G L+S + C CG S D
Sbjct: 170 RPRGTVEDFDHLPDEEKGKKMWSKYLEREDSKIVDLFVGQLKSSLTCSHCGFCSTVFDPF 229
Query: 198 MDISLDI----LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
D+SL I SL + M+ F + +VLDG+ K C CK K+ +I + P IL
Sbjct: 230 WDLSLPIAKKGYGEVSLMDCMRLFTKEDVLDGDEKPTCYRCKARRRCTKKFTIQKFPKIL 289
Query: 254 VIQLKRF-EGIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
V+ LKRF E K+ + F + L L F + S + Y L+ HSG + G
Sbjct: 290 VLHLKRFSEARRTSKLSTFVNFPMKDLDLREFASENSINAV--YNLYAVSNHSG-TTMGG 346
Query: 312 HYYAYIKD-AIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HY AY ++ + G WY NDS V+ + +V S Y+LF+
Sbjct: 347 HYTAYCRNPSSGEWYTFNDSRVTPMSSSQVRSSDAYVLFY 386
>gi|426358892|ref|XP_004046723.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Gorilla
gorilla gorilla]
Length = 331
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 118/227 (51%), Gaps = 30/227 (13%)
Query: 8 QMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQL 67
Q++ + L R+ GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS C
Sbjct: 61 QLAPREKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTC--- 117
Query: 68 TGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHE 127
R + C C ++ + R+L P + + A F G+QEDAHE
Sbjct: 118 --------HRHKGCMLCTMQAHVTRALY------RPGHVIQPSQALAAGFHRGKQEDAHE 163
Query: 128 FLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLAC 187
FL + +DA CL G + + ++++ +IFGG +SQ+KCL C
Sbjct: 164 FLMFTVDAMKKACL-------------PGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHC 210
Query: 188 GAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNC 234
S+ D +DI+LDI + S+++A+ + +PE L+G N Y+C C
Sbjct: 211 HGISDTFDPYLDIALDIQAAQSVEQALVQLVKPEELNGENAYRCGLC 257
>gi|238477375|sp|Q6DCJ1.2|UB22B_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22-B; AltName:
Full=Deubiquitinating enzyme 22-B; AltName:
Full=Ubiquitin thioesterase 22-B; AltName:
Full=Ubiquitin-specific-processing protease 22-B
Length = 523
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 173/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 145 TWEPTKRELELLQHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 204
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H C+ + +S C C + S + P ++ + A H
Sbjct: 205 DRHK--CEMQSPNS---------CLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHL 253
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 254 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 302
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 303 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDAGVVNGESHVSGTTTLTD 362
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 363 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 422
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L + FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 423 YVSFPLELDMMPFMASSKESRMNGQYQQPSDSLHNDNKYSLFAVVNHQG-TLESGHYTSF 481
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++V+ + Y+LF+
Sbjct: 482 IRQHKDQWFKCDDAIITKASIKDVIDSEGYLLFY 515
>gi|403365930|gb|EJY82756.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 828
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 172/368 (46%), Gaps = 61/368 (16%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
G+ N+GN+C+LN+ +QCL+ PL +F L H + + + + + F L
Sbjct: 196 GIYNMGNTCFLNTAIQCLSAVQPLTDFFLGDLHE---QTINKTNPMGTSGEISIYFANLL 252
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACH---------N 138
K I R + P K+ L FA H +DA EFL Y++D H N
Sbjct: 253 KDIWRGKEEKI---YPQKLLKKLNEFAPH------QDAQEFLAYLLDCLHEDLNRADKFN 303
Query: 139 TCLRLKKLRRKGGGSSGGGGGGET-------------------------INGGSSVVKEI 173
+ K++ K S G ET + S++ ++
Sbjct: 304 NLKKQKEIDHKKKIQSLTLGKQETEQQENFAGYSEERQELIAYDAWKDHLFNNRSIIVDL 363
Query: 174 FGGALQSQVKCLACGAESNKVDEIMDISLDILN-----SCSLKEAMQKFFQPEVLDGNNK 228
F G L+S +KCL C S K D M +S+ I + + +L+E +++F + E+LDG++K
Sbjct: 364 FQGQLKSALKCLTCQHMSIKFDSFMYLSVPIPSGYKGRNPTLEECVEEFTREEILDGDDK 423
Query: 229 YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFG----GKIDKAIAFE-EVLVLSSF 283
+KC CK A K++ I + P+IL++ LKRFE F GKI+ + F L L+ +
Sbjct: 424 WKCPKCKINQRASKKIDIWKLPSILIVHLKRFE--FHEKRYGKINDYVDFPLHNLNLTPY 481
Query: 284 MCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR-WYCCNDSYVSVSTLQEVLS 342
+ K Q +P Y LF H G+ GHYYA+ K + WY +D V + ++V S
Sbjct: 482 VSKL-QREKPIYDLFAVSNHEGYL-GGGHYYAFTKHRQNQLWYSFDDDIVKRISDEKVTS 539
Query: 343 EKVYILFF 350
YILF+
Sbjct: 540 AGAYILFY 547
>gi|242005524|ref|XP_002423614.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
gi|212506774|gb|EEB10876.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
Length = 477
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 166/376 (44%), Gaps = 62/376 (16%)
Query: 10 SWQPSLLSE-------KRKR--GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
SW+PS+ KRKR +GLR NLGN+C++N ++Q L +TP L N+ L
Sbjct: 130 SWEPSMAERDLMIKNPKRKRILENTTIGLRGLINLGNTCFMNCIVQALMHTPLLRNYFLA 189
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIF---A 114
H +C+ A++ C C L + S P + L + A
Sbjct: 190 DHH--VCQL--------ADQPGNCLVCELSRLYQEFYSGK---KNPLTLHKLLHLIWNQA 236
Query: 115 EHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIF 174
H Q+DAHEF +D H C +K SS S ++ +IF
Sbjct: 237 RHLAGYEQQDAHEFFIATLDVLHRHCEATQK-------SSNPAKC-------SCIIDQIF 282
Query: 175 GGALQSQVKCLACGAESNKVDEIMDISLDILNSC--------SLKEAMQKFFQPEVLDGN 226
G LQS V C +C S +D DISLD+ S SL + +++F + E L
Sbjct: 283 TGGLQSDVVCQSCNNVSTTIDPFWDISLDLGQSVGLSGSEPKSLVDCLERFTRAEHLGST 342
Query: 227 NKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI--FGGKIDKAIAFEEVLVLSSFM 284
K KC+NCK + KQ+++ + P + LKRFE KI I+F E L ++ FM
Sbjct: 343 AKIKCNNCKNYQESTKQLTMKKLPVVASFHLKRFEHSTRLHKKISTFISFPEHLDMTPFM 402
Query: 285 CKASQDPQPE---------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVS 335
Y LF I H G S D+GHY A+++ W+ C+D ++ +
Sbjct: 403 SHQRNLGGNGNLNNPSAYMYSLFAVINHVG-SLDAGHYTAFVRQQKNHWFKCDDHLITRA 461
Query: 336 TLQEVLSEKVYILFFI 351
L +VL+ K +L I
Sbjct: 462 NLNDVLTNKRGLLLRI 477
>gi|229558006|sp|A6H8I0.1|UBP22_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22; AltName:
Full=Deubiquitinating enzyme 22; AltName: Full=Ubiquitin
thioesterase 22; AltName:
Full=Ubiquitin-specific-processing protease 22
gi|148921505|gb|AAI46619.1| Usp22 protein [Danio rerio]
Length = 506
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 169/393 (43%), Gaps = 78/393 (19%)
Query: 11 WQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLKL 58
W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 131 WEPTKRELELLRHNPKRRKITANCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSD 190
Query: 59 QHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFK 118
+H C+ + C C + + S + P ++ + A H
Sbjct: 191 RHK--CEM----------QSNSCLVCEMSQLFQEFYSGHRSPHIPFRLLHLVWTHARHLA 238
Query: 119 CGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGAL 178
Q+DAHEFL +D H C G N + ++ +IF G L
Sbjct: 239 GYEQQDAHEFLIAALDVLHRHC------------KDDNGKKANNPNHCNCIIDQIFTGGL 286
Query: 179 QSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKEA 213
QS V C C S +D DISLD+ S +L +
Sbjct: 287 QSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDGSVVNGDSHPSGATTLTDC 346
Query: 214 MQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKA 271
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 347 LRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKRLPIVACFHLKRFEHSAKLRRKITTY 406
Query: 272 IAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAYI 317
++F L ++ FM + Q QP +Y LF + H G + +SGHY +I
Sbjct: 407 VSFPLELDMTPFMASSKESRMNGQYQQPVDSLNNDNKYSLFAVVNHQG-TLESGHYTTFI 465
Query: 318 KDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 466 RQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 498
>gi|195389480|ref|XP_002053404.1| GJ23355 [Drosophila virilis]
gi|194151490|gb|EDW66924.1| GJ23355 [Drosophila virilis]
Length = 906
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 165/335 (49%), Gaps = 24/335 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CY+NS+LQCL+ TP L FC+ ++ + ++ + + + E I E
Sbjct: 573 GLKNLGNTCYMNSILQCLSNTPQLMEFCISDKYKNY---ISRRNKTNGQVIEEVAALIKE 629
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ V A ++ + + + F+ Q+D+HEFL ++D H+ L+ R
Sbjct: 630 LWNGQYKCV-----ASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLRVPR 684
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI--- 204
++ S+ E S+++ +F G ++S VKC+ C ES + ++SL++
Sbjct: 685 KRDIISAAEKAWLEFTKSQESIIQHLFYGQIKSTVKCVTCTKESATYECFSNLSLELPAN 744
Query: 205 LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI- 263
N C L + M +F E + G N C NCK A K++ I + P +LVI LKRF
Sbjct: 745 ANFCYLHQCMDMYFSGEKIHGWN---CPNCKTKRDAIKKLDISKLPPVLVIHLKRFYADP 801
Query: 264 --FGGKIDKAIAFE---EVLVLSSFMCKA-SQDPQPE-YKLFGTIVHSGFSPDSGHYYAY 316
G I K + E L + + + S+ P+ Y+L+ H G + + GHY A+
Sbjct: 802 SNAGAYIKKQNYLQFPLENLEMKPYTARVESRAVTPKTYQLYAVSNHYG-TMEGGHYTAF 860
Query: 317 IKDA-IGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
K A GRWY +D VS V+S YILF+
Sbjct: 861 CKSAHYGRWYKFDDQVVSPLDTSNVVSSAAYILFY 895
>gi|403182891|gb|EJY57700.1| AAEL017004-PA [Aedes aegypti]
Length = 666
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 168/359 (46%), Gaps = 47/359 (13%)
Query: 25 PP----LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
PP GL N GN+CY NSVLQ L + P L+ + + + T + L +
Sbjct: 316 PPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCL-----AD 370
Query: 81 CPFCI-LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNT 139
+ I +K+ V S+ AP K + LR E F Q+DAHEFL ++I+ N
Sbjct: 371 LFYSIATQKKKVGSI-------APKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHI-NE 422
Query: 140 CLRLKKLRRKGGGSSGGGGGG------ETINGGS-------SVVKEIFGGALQSQVKCLA 186
+ ++ + KG G+SG G ++NG + + V EIF G L S+ +CL
Sbjct: 423 IILAERNQAKGAGTSGSKNAGTIGGGGGSLNGDNPGQPQEPTWVHEIFQGILTSETRCLN 482
Query: 187 CGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSI 246
C S+K + D+ +D+ + S+ ++ F E L +NK+KCDNC A+K+M +
Sbjct: 483 CETVSSKDENFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRV 542
Query: 247 LQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQD---PQPEYKLFGTIVH 303
+ P IL + LKRF+ + ++ V L + S D P Y L ++H
Sbjct: 543 KKLPMILALHLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLMAVVIH 602
Query: 304 SGFSPDSGHYYAYIKDAIGRWYCCNDSYVS---VSTLQEVL---------SEKVYILFF 350
G P+ GHY + +K + G W +D V ST+++ SE YILF+
Sbjct: 603 CGSGPNRGHYISIVK-SHGFWLLFDDDMVDKIEASTIEDFYGLTSDIQKSSETGYILFY 660
>gi|383865627|ref|XP_003708274.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Megachile
rotundata]
Length = 502
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 172/390 (44%), Gaps = 71/390 (18%)
Query: 6 ELQMSWQPSLLSEKRKRGGP---------PLGLR---NLGNSCYLNSVLQCLTYTPPLAN 53
E +W+P+ + + R P +GLR NLG++C++N ++Q L +TP L +
Sbjct: 126 EFYRAWEPTQIEAELLRKHPRRRRVVENSTIGLRGLINLGSTCFMNCIVQALIHTPLLRD 185
Query: 54 FCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIF 113
+ L +H C Q T R C L + LTL K+ +
Sbjct: 186 YFLADRHH--CPQPT--------RCLVCEVSHLFQEFYSGSKAPLTLH---KLLHLIWTH 232
Query: 114 AEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEI 173
A H Q+DAHEF +D H C L + + + + ++ +I
Sbjct: 233 ARHLAGYEQQDAHEFFIATLDVLHRHCEAAPILVK------------DNPHHCNCIIDQI 280
Query: 174 FGGALQSQVKCLACGAESNKVDEIMDISLDI------------LNSCSLKEAMQKFFQPE 221
F G LQS V C AC S +D DISLD+ SL + +++F + E
Sbjct: 281 FTGGLQSDVVCQACNGVSTTIDPFWDISLDLGPAASASGSDSSGPPTSLLDCLERFTRAE 340
Query: 222 VLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLV 279
L + K KC NC+ + KQ+++ Q P + LKRFE I KI I+F E L
Sbjct: 341 HLGSSAKIKCSNCQTYQESTKQLTMKQLPIVASFHLKRFEHSSIQDKKISTFISFPEQLD 400
Query: 280 LSSFM----------------CKASQD---PQPEYKLFGTIVHSGFSPDSGHYYAYIKDA 320
++ FM K +D Y LF I H G S ++GHY A+I+
Sbjct: 401 MTPFMSHRRNGNNNSAMMDGLAKNGEDMAFSDNRYSLFAVINHEG-SLETGHYTAFIRQQ 459
Query: 321 IGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
+W+ C+D ++ + L++VL+ + Y+LF+
Sbjct: 460 RDQWFKCDDHLITRARLKDVLTSEGYLLFY 489
>gi|399217770|emb|CCF74657.1| unnamed protein product [Babesia microti strain RI]
Length = 584
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 166/336 (49%), Gaps = 41/336 (12%)
Query: 24 GPPLGLRNLG-NSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECP 82
G GL N G N C++N+V+Q L P + L H + CK L S C
Sbjct: 87 GSSCGLYNPGQNICFMNAVIQTLINLPYITPCLLSGLHKASCK-LRSKSLF-------CS 138
Query: 83 FCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLR 142
C+LE ++ S+ ++ P + I++ + G+Q+D+HEFLRY++++
Sbjct: 139 LCLLESLAQKAHSIKGAVNNPFFSITKKAIWSRYVP-GKQQDSHEFLRYLVESF------ 191
Query: 143 LKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISL 202
S+ G + +++ + F G L++ VKCL C S K++ +DI+L
Sbjct: 192 ----------STPMGAKSAPDSYKRNLIGQAFHGTLKTTVKCLQCKYTSEKLENFLDIAL 241
Query: 203 DILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE- 261
DI SL+ + +F QP+ L G+NKY C CK A ++ + P +L I LKRF
Sbjct: 242 DITKE-SLENCIAEFIQPQQLTGSNKYHCPKCKNKRDATISLNFGKLPVVLCIALKRFNS 300
Query: 262 GIFG-GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDA 320
GIFG K +++ + + + L+ Y+L + H G S SGHY AY +
Sbjct: 301 GIFGLEKTFRSLKYPQHMDLNGI----------NYELSALVCHLGHSLYSGHYVAYARAG 350
Query: 321 IGRWYCCNDSYVSVSTLQEVL--SEKVYILFFIRAN 354
G W +DS+VS+S +VL ++ Y+LF+++ N
Sbjct: 351 HGFWNKFDDSHVSLSEKHQVLEQAKSAYLLFYVQQN 386
>gi|90399346|emb|CAH68425.1| H0811D08.10 [Oryza sativa Indica Group]
Length = 562
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 167/380 (43%), Gaps = 69/380 (18%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSS-LCKQLT--GDSALDAERKRECPFC 84
GL NLGN+C++NSVLQ L + PPL N+ L +H+ LC + T + +A K C C
Sbjct: 183 GLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRYLCPRQTPMRRRSAEANDKAACLAC 242
Query: 85 ILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLK 144
L++ + S + T +PAK A + Q+DAHEF ++D H +
Sbjct: 243 DLDEIYSAAFSGERTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIH------E 296
Query: 145 KLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI 204
++ S G +G + +F G L+S V C CG S + MDISLD+
Sbjct: 297 NIKDDQHKSHAQG------HGDCCIAHRVFSGILRSDVTCTHCGFTSTTFEPCMDISLDL 350
Query: 205 ----------------------------LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKK 236
+L +++F + E LD K+ C+ CK+
Sbjct: 351 DAGYNNSLGVANPKVHVRNGERSSGGTNTKVSTLMRCLERFTRAERLDAEQKFFCERCKE 410
Query: 237 LVSARKQMSILQSPNILVIQLKRFEGI----FGGKIDKAIAFEEVLVLSSFM-------- 284
+ KQMSI + P + +KRFE K+D + F L ++ ++
Sbjct: 411 RQESLKQMSIRRLPLVSCFHIKRFEHSSVKKMSRKVDHCLQFPFSLDMAPYLSSSILRSR 470
Query: 285 ------------CKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYV 332
+ + E+++F I+HSG ++GHY Y++ WY C+D++V
Sbjct: 471 FGNRIFPSEASDADSVSEFSSEFEIFAVIMHSG-KLEAGHYVTYLR-LNNHWYKCDDAWV 528
Query: 333 SVSTLQEVLSEKVYILFFIR 352
+ V + + Y+LF+++
Sbjct: 529 TRVEEHTVRTSQAYMLFYVQ 548
>gi|147904969|ref|NP_001090240.1| ubiquitin carboxyl-terminal hydrolase 22-B [Xenopus laevis]
gi|50418363|gb|AAH78033.1| Usp27x protein [Xenopus laevis]
Length = 572
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 173/394 (43%), Gaps = 76/394 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 194 TWEPTKRELELLQHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 253
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H C+ + +S C C + S + P ++ + A H
Sbjct: 254 DRHK--CEMQSPNS---------CLVCEMSTLFQEFYSGHRSPHIPYRLLHLVWTHARHL 302
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 303 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 351
Query: 178 LQSQVKCLACGAESNKVDEIMDISLDILNS-------------------------CSLKE 212
LQS V C C S +D DISLD+ S +L +
Sbjct: 352 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDAGVVNGESHVSGTTTLTD 411
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 412 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 471
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L + FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 472 YVSFPLELDMMPFMASSKESRMNGQYQQPSDSLHNDNKYSLFAVVNHQG-TLESGHYTSF 530
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
I+ +W+ C+D+ ++ +++++V+ + Y+LF+
Sbjct: 531 IRQHKDQWFKCDDAIITKASIKDVIDSEGYLLFY 564
>gi|198470304|ref|XP_001355290.2| GA13118 [Drosophila pseudoobscura pseudoobscura]
gi|198145386|gb|EAL32347.2| GA13118 [Drosophila pseudoobscura pseudoobscura]
Length = 872
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 163/353 (46%), Gaps = 55/353 (15%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRN+GN+C++NSV+QCL++T L F L+ H S T D + E + +++
Sbjct: 548 GLRNIGNTCFMNSVIQCLSHTTELTRF-LRTHHGSRSSA-TKDQLILFEFAK-----LIQ 600
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ S+ +D + R+++++ Q+DA EFLR+ +D+ H+
Sbjct: 601 EMWTSSVHTVTPMDLKRAFSAKHRMYSDY----NQQDAQEFLRFFLDSLHSAL------- 649
Query: 148 RKGGGSSGGGGGGETIN--------------------GGSSVVKEIFGGALQSQVKCLAC 187
G GET+N +S+V+++F G L+S +KC C
Sbjct: 650 -------NSGIKGETLNIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQLKSTLKCTTC 702
Query: 188 GAESNKVDEIMDISLDILNS--CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
G S D D+S+ + +S C L+ + F + E+LDG+ C CK K +
Sbjct: 703 GNTSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEILDGDEMPTCSKCKTRRKCTKSFT 762
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAF---EEVLVLSSFMCKASQDPQPEYKLFGTIV 302
I + P LVI LKRF K+ + F + L ++S+ A+ + Y L+
Sbjct: 763 IQRFPKYLVIHLKRFSETRWSKLSNIVEFPTADRDLNMASY--GANSNSNVHYSLYAISN 820
Query: 303 HSGFSPDSGHYYAYIKDAIGR-WYCCNDSYVSVSTLQEVL-SEKVYILFFIRA 353
H G S GHY A K + R W+ ND+ VS S + L S YILF+ R
Sbjct: 821 HMG-STAGGHYTALCKHPVSRKWHEFNDNIVSDSVSENFLVSSSAYILFYERT 872
>gi|194764571|ref|XP_001964402.1| GF23156 [Drosophila ananassae]
gi|190614674|gb|EDV30198.1| GF23156 [Drosophila ananassae]
Length = 899
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 166/335 (49%), Gaps = 24/335 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CY+NS+LQCL+ TP L +C+ ++ S ++ + + + E I E
Sbjct: 567 GLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKSY---ISRSNRTNGQVIEEVAALIKE 623
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ V A ++ + + + F+ Q+D+HEFL ++D H+ L R
Sbjct: 624 LWNGQYKCV-----ASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVAR 678
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI--- 204
++ S+ E S++ +F G ++S VKC+AC ES + ++SL++
Sbjct: 679 QRETISASEKAWLEFTKAKESMILHLFYGQIKSTVKCVACNKESATYECFSNLSLELPPN 738
Query: 205 LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF---E 261
N C L + M +F E + G N C NC A K++ I + P +LV+ LKRF
Sbjct: 739 SNVCQLNQCMDMYFSGERIQGWN---CPNCNTKRDAIKKLDISKLPPVLVVHLKRFYADP 795
Query: 262 GIFGGKIDKAIAFE---EVLVLSSFMCKA-SQDPQPE-YKLFGTIVHSGFSPDSGHYYAY 316
G G I K + L ++ ++ +A S+ P+ Y+L+ H G + + GHY A+
Sbjct: 796 GNTGAYIKKQNYLRFPLDNLEMTPYIARAESRAVTPKTYQLYAVSNHYG-TMEGGHYTAF 854
Query: 317 IKDA-IGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
K A GRW+ +D VS V+S YILF+
Sbjct: 855 CKSANYGRWFKFDDQIVSALDTSNVVSSAAYILFY 889
>gi|307211269|gb|EFN87455.1| Ubiquitin carboxyl-terminal hydrolase 2 [Harpegnathos saltator]
Length = 342
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/350 (34%), Positives = 172/350 (49%), Gaps = 28/350 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRN+GN+C++NSV+QCL+ T PL + L Q+ L T S++ + I E
Sbjct: 4 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQY--LADINTTTSSMKGALIKAFSQVIHE 61
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL-KKL 146
V V T ++IQ FA F Q+DA EFLRY+++ H R+ KL
Sbjct: 62 LWEVGGDHVVNTTSLKSQIQR----FAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTTKL 117
Query: 147 RRKGGG--------SSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
G + S+V ++F G L+S + C +C S +D
Sbjct: 118 PPIHGDIPDSYTETQKAVESWKRYLRSEDSMVVDVFVGQLRSSLHCTSCDHVSVTLDPFW 177
Query: 199 DISLDI---LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVI 255
D+SL I + L + ++ F + EVLDG+ K C C+ K SI + P ILVI
Sbjct: 178 DLSLPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVI 237
Query: 256 QLKRFEGI--FGGKIDKAIAFEEV-LVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGH 312
LKRF + F GK++ + F L LS+F A + P Y L+G HSG + SGH
Sbjct: 238 HLKRFSPMERFRGKLNVMVDFPLTGLDLSAF--AAPKVPGCTYNLYGVANHSG-TTYSGH 294
Query: 313 YYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSAN 361
Y AY K G W+ NDS VSV + + V+S + Y+LF+ Q+P S++
Sbjct: 295 YTAYCKHPYSGEWHEYNDSRVSVVSARSVVSSEAYVLFY---EQQPHSSH 341
>gi|195169026|ref|XP_002025329.1| GL13296 [Drosophila persimilis]
gi|194108785|gb|EDW30828.1| GL13296 [Drosophila persimilis]
Length = 820
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 163/352 (46%), Gaps = 55/352 (15%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRN+GN+C++NSV+QCL++T L F L+ H S T D + E + +++
Sbjct: 496 GLRNIGNTCFMNSVIQCLSHTTELTRF-LRTHHGSR-SSATKDQLILFEFAK-----LIQ 548
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ S+ +D + R+++++ Q+DA EFLR+ +D+ H+
Sbjct: 549 EMWTSSVHTVTPMDLKRAFSAKHRMYSDY----NQQDAQEFLRFFLDSLHSAL------- 597
Query: 148 RKGGGSSGGGGGGETIN--------------------GGSSVVKEIFGGALQSQVKCLAC 187
G GET+N +S+V+++F G L+S +KC C
Sbjct: 598 -------NSGIKGETLNIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQLKSTLKCTTC 650
Query: 188 GAESNKVDEIMDISLDILNS--CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
G S D D+S+ + +S C L+ + F + E+LDG+ C CK K +
Sbjct: 651 GNTSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEILDGDEMPTCSKCKTRRKCTKSFT 710
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAF---EEVLVLSSFMCKASQDPQPEYKLFGTIV 302
I + P LVI LKRF K+ + F + L ++S+ A+ + Y L+
Sbjct: 711 IQRFPKYLVIHLKRFSETRWSKLSNIVEFPTADRDLNMASY--GANSNSNVHYSLYAISN 768
Query: 303 HSGFSPDSGHYYAYIKDAIGR-WYCCNDSYVSVSTLQEVL-SEKVYILFFIR 352
H G S GHY A K + R W+ ND+ VS S + L S YILF+ R
Sbjct: 769 HMG-STAGGHYTALCKHPVSRKWHEFNDNIVSDSVSENFLVSSSAYILFYER 819
>gi|56693219|ref|NP_001008574.1| ubiquitin carboxyl-terminal hydrolase 2 [Danio rerio]
gi|56269271|gb|AAH86963.1| Zgc:92134 [Danio rerio]
Length = 391
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 159/343 (46%), Gaps = 27/343 (7%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCIL 86
+GLRNLGN+C++NS+LQCL+ T L ++CL H+S + L ++ E I
Sbjct: 58 VGLRNLGNTCFMNSILQCLSNTQSLRDYCL---HNSHRRDLNNNNRTHTALMEEFAKLIQ 114
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
S + +IQ +A F Q+DA EFLR+++D HN R+ +
Sbjct: 115 TMWTSSSSEAVSPSEFKTQIQR----YAPRFVGYNQQDAQEFLRFLLDGLHNEVNRV-TV 169
Query: 147 RRKGGGSS---------GGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEI 197
R +G G + + S + ++F G L+S + C CG S D
Sbjct: 170 RPRGNTEDFDHLPDEEKGKKMWSKYLEREDSKIVDLFVGQLKSSLTCSECGYCSTVFDPF 229
Query: 198 MDISLDI---LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
D+SL I SL + M+ F + +VLDG+ K C CK K+ ++ + P ILV
Sbjct: 230 WDLSLPIAKGYGEVSLMDCMRLFTKEDVLDGDEKPTCYRCKARRRCTKKFTVQKFPKILV 289
Query: 255 IQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
+ LKRF I K+ + F + L L F + + Y L+ HSG + G
Sbjct: 290 LHLKRFSEARIRTSKLSTFVNFPMKDLDLREF--ASDRSSSAVYNLYAVSNHSG-TTMGG 346
Query: 312 HYYAY-IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 353
HY AY G WY NDS V+ + +V S Y+LF+ RA
Sbjct: 347 HYTAYCCNPENGEWYTYNDSRVTPMSASQVRSSDAYVLFYERA 389
>gi|47215260|emb|CAF96987.1| unnamed protein product [Tetraodon nigroviridis]
Length = 535
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 178/408 (43%), Gaps = 82/408 (20%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANF--- 54
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F
Sbjct: 135 TWEPTKRELELLRHNPKRRRITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 194
Query: 55 -----------CLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAP 103
CL + S L +++ ++AL R P ++ S + P
Sbjct: 195 DRHKCEMQSNSCLVCEMSQLFQEV--NAALRTRRTASFPPTQTHDFPLQFYSGHRSPHIP 252
Query: 104 AKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETI 163
++ + A H Q+DAHEFL +D H C G
Sbjct: 253 FRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC------------KDDNGKKANNP 300
Query: 164 NGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI------------------L 205
N + ++ +IF G LQS V C C S +D DISLD+ L
Sbjct: 301 NHCNCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGGDASAL 360
Query: 206 N-------SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLK 258
N + +L + +++F +PE L + K KC C + KQ+++ + P + LK
Sbjct: 361 NGESHATGATTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLK 420
Query: 259 RFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQ-----------DP---QPEYKLFGTIV 302
RFE KI ++F L ++ FM + + DP +Y LF +
Sbjct: 421 RFEHSAKLRRKITTYVSFPLELDMTPFMASSKESRMNGQYQQIVDPFNNDNKYSLFAVVN 480
Query: 303 HSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
H G + +SGHY +I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 481 HQG-TLESGHYTTFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 527
>gi|348541545|ref|XP_003458247.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Oreochromis
niloticus]
Length = 1082
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 165/342 (48%), Gaps = 22/342 (6%)
Query: 23 GGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECP 82
G GLRNLGN+CY+NS+LQCL TP LA + ++ + + + L + +
Sbjct: 746 GASLTGLRNLGNTCYMNSILQCLCNTPALAEY---FNNNCYLEDINRHNILGHKGEVAEE 802
Query: 83 FCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACH---NT 139
F ++ K + L ++ P + + E F Q+D+ E L +++D H N
Sbjct: 803 FGVIMKALWAGLYKCIS---PRDFKITIGKINEQFAGYDQQDSQELLLFLMDGLHEDLNK 859
Query: 140 CLRLKKLRRKGGGSSGGGGGGETING-----GSSVVKEIFGGALQSQVKCLACGAESNKV 194
K+ + + G + S++ +F G +S V+CL C +S
Sbjct: 860 ADNRKRYKEEENDHLDDQTGADLAWSKHKLLNESIIVALFQGQFKSTVQCLTCHRKSRTF 919
Query: 195 DEIMDISLDILNS--CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNI 252
+ M +SL + ++ CSL++ ++ F + E L NNK C +CK + K++ I + P I
Sbjct: 920 ETFMYLSLPLASTSKCSLQDCLRLFSKEEKLTDNNKVFCRHCKAHRDSTKKLEIWKVPPI 979
Query: 253 LVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPD 309
L++ LKRF EG + K+ ++ F + L L+ ++ Q + Y L+G H G D
Sbjct: 980 LLVHLKRFSYEGRWKQKLQTSVDFPLDNLDLAQYVIGPKQSLK-RYNLYGVSNHYG-GLD 1037
Query: 310 SGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVYILFF 350
GHY AY K+A RWY +D VS + V S YILF+
Sbjct: 1038 GGHYTAYCKNAAKQRWYKFDDHEVSDISTSSVKSSAAYILFY 1079
>gi|198435016|ref|XP_002126339.1| PREDICTED: similar to ubiquitin specific peptidase 8 [Ciona
intestinalis]
Length = 1094
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 147/318 (46%), Gaps = 21/318 (6%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRNLGNSCY+NSVLQC+ LA + L S K L + + + F +L
Sbjct: 760 GLRNLGNSCYMNSVLQCMFNMTQLAEYILT---DSYTKDLNRANKIGHGGRVAESFSVLL 816
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ + S P+ +S + F QED+ EFL ++D H + +
Sbjct: 817 RAV---WSSKYEYIVPSDFKSIIGTINSSFAGYTQEDSQEFLMLLLDGLHEDLNKAPQSE 873
Query: 148 RKGGGSSGGGGGGETINGG--------SSVVKEIFGGALQSQVKCLACGAESNKVDEIMD 199
K + E S++ E+ G ++ VKCL CG S K D M
Sbjct: 874 YKEEPDNDALDDEEAAQMAWKYHKKRNESIIVELLKGQFKATVKCLHCGKASRKFDPFMY 933
Query: 200 ISLDILN-SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLK 258
+SL + N S S+ + ++ F + E + G++++ C NCK L A + + I + P +L+I K
Sbjct: 934 LSLPLPNKSASIYDILKSFQRVEQMTGSDRWHCPNCKTLRDAVRSIEIWKLPPVLIIHFK 993
Query: 259 RF--EGIFGGKIDKAIAFEEV-LVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYA 315
RF G + KI I++ L L+ F+ + +P+Y LF H G DSGHY A
Sbjct: 994 RFVHTGRWRDKIHTNISYPMTQLDLTPFISGKQR--RPKYNLFAVSHHQGAGLDSGHYTA 1051
Query: 316 YIKDAI-GRWYCCNDSYV 332
K + WY +D+ V
Sbjct: 1052 SCKSVLDNNWYKFDDTEV 1069
>gi|2894598|emb|CAA17132.1| putative protein [Arabidopsis thaliana]
gi|7268541|emb|CAB78791.1| putative protein [Arabidopsis thaliana]
Length = 1082
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 156/336 (46%), Gaps = 32/336 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGNSC+LNSV QC T+T PL L ++ C G+ C +
Sbjct: 564 GLWNLGNSCFLNSVFQCFTHTVPLIESLLSFRYEVPCH--CGNEFF-------CVIRAIR 614
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I +L + AP L F+ F+ +QEDAHEFL+ ++ C
Sbjct: 615 YHIEAALRPERCPIAPYFFFDNLNYFSPDFQRYQQEDAHEFLQAFLEKLE-IC------- 666
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G T G +++F G L S ++C C S ++ + +SL+I +
Sbjct: 667 ----------GSDRTSFRGDITSQDVFSGRLISGLRCCNCDYVSETYEKSVGLSLEIEDV 716
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFG 265
+L A++ F + E LD + CDNC + VS KQ+ + + P + LKRF+ G++
Sbjct: 717 DTLGSALESFTRVEKLD--EQLTCDNCNEKVSKEKQLLLDKLPLVATFHLKRFKNNGLYM 774
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQDP-QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRW 324
KI K + + L +M ++ +Y L+ + H G+S GHY +Y++ A W
Sbjct: 775 EKIYKHVKIPLEIDLQPYMRNIQENEVSTKYHLYALVEHFGYSVAYGHYSSYVRSAPKIW 834
Query: 325 YCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSA 360
+ +DS V+ VLS+ YILF+ R R S+
Sbjct: 835 HHFDDSKVTRIDEDMVLSQDSYILFYAREGTRWFSS 870
>gi|395520122|ref|XP_003764186.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Sarcophilus
harrisii]
Length = 599
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 164/340 (48%), Gaps = 28/340 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L +AL E F L
Sbjct: 262 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLNSSSHAHTALMEE------FAKL 315
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL--- 143
+ I S + D+ +P++ ++ ++ FA F Q+DA EFLR+++D HN R+
Sbjct: 316 IQTIWTSSANDVV--SPSEFKTQIQRFAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVR 373
Query: 144 -----KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ L G + + S + ++F G L+S + C CG S D
Sbjct: 374 PKSNPENLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTECGYCSTVFDPFW 433
Query: 199 DISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
D+SL I +L + M+ F + +VLDG+ K C C+ K+ SI + P ILV
Sbjct: 434 DLSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQKFPKILV 493
Query: 255 IQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
+ LKRF I K+ + F L L F + + Y L+ HSG + G
Sbjct: 494 LHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMGG 550
Query: 312 HYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HY AY + + G W+ NDS V+ + +V S Y+LF+
Sbjct: 551 HYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRSSDAYLLFY 590
>gi|126326536|ref|XP_001370349.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 1
[Monodelphis domestica]
Length = 600
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 164/340 (48%), Gaps = 28/340 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L +AL E F L
Sbjct: 263 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLNSSSHAHTALMEE------FAKL 316
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL--- 143
+ I S + D+ +P++ ++ ++ FA F Q+DA EFLR+++D HN R+
Sbjct: 317 IQTIWTSSANDVV--SPSEFKTQIQRFAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVR 374
Query: 144 -----KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ L G + + S + ++F G L+S + C CG S D
Sbjct: 375 PKSNPENLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTECGYCSTVFDPFW 434
Query: 199 DISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
D+SL I +L + M+ F + +VLDG+ K C C+ K+ SI + P ILV
Sbjct: 435 DLSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQKFPKILV 494
Query: 255 IQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
+ LKRF I K+ + F L L F + + Y L+ HSG + G
Sbjct: 495 LHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMGG 551
Query: 312 HYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HY AY + + G W+ NDS V+ + +V S Y+LF+
Sbjct: 552 HYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRSSDAYLLFY 591
>gi|351705889|gb|EHB08808.1| Ubiquitin carboxyl-terminal hydrolase 2 [Heterocephalus glaber]
Length = 612
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 164/340 (48%), Gaps = 28/340 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L + +AL E F L
Sbjct: 275 GLRNLGNTCFMNSILQCLSNTRELKDYCLQRLYMQDLSHTSSTHTALMEE------FAKL 328
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL--- 143
+ I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN R+
Sbjct: 329 IQTIWTSCPNDVV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVR 386
Query: 144 -----KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ L G + + S + ++F G L+S + C CG S D
Sbjct: 387 PKSNPENLNHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFW 446
Query: 199 DISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
D+SL I +L + M+ F + +VLDG+ K C C+ K+ SI + P ILV
Sbjct: 447 DLSLPIAKRSYPEVTLMDCMRLFTKEDVLDGDEKPTCCCCRARKRCIKKFSIQRFPTILV 506
Query: 255 IQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
+ LKRF I K+ + F L L F + + Y L+ HSG + G
Sbjct: 507 LHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMGG 563
Query: 312 HYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HY AY + + G W+ NDS V+ + +V + Y+LF+
Sbjct: 564 HYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 603
>gi|167998913|ref|XP_001752162.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696557|gb|EDQ82895.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 344
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 165/361 (45%), Gaps = 53/361 (14%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C+ NSV+Q L L + K GD D++
Sbjct: 1 GLMNLGNTCFFNSVMQNLVGVSMLREYFSKEPSVQ-----EGDGDDDSKSA--------S 47
Query: 88 KRIVRSLSVDLTLD---APAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACH--NTCLR 142
R +R+ S + +P ++ S + A FK +Q+D+HE LR ++D H R
Sbjct: 48 ARTMRTRSFGANVGNAVSPTRLFSAICAKAPRFKGFQQQDSHELLRCLLDGLHMEEESAR 107
Query: 143 LKKLRRKGGGSSGG-----GGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEI 197
+L + G G G I + V+ +FGG S V C CG S +
Sbjct: 108 KAQLSAESPTEPNGTVKEEGSHGNPIKVPVTFVEHVFGGQFSSTVSCCVCGHSSVVYEPF 167
Query: 198 MDISLDILNS--------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLV-SARKQMSILQ 248
+D+SL I ++ SL+ +Q F + EVL G N + C+NC K+ +A K+ I +
Sbjct: 168 LDLSLPIPSAREVYTYPMMSLEGCLQAFTKTEVLSGENAWGCENCAKVERNATKRFLISK 227
Query: 249 SPNILVIQLKRFEGIFGGKIDK---AIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
+P +L + LKRF G++ K I F E L L F K Y+L GT+ HSG
Sbjct: 228 APRVLTVHLKRFAQDLHGRLSKLSGHITFHEQLDLGPFTDKGWDGV---YQLIGTVEHSG 284
Query: 306 FSPDSGHYYAYIKDAIG--------------RWYCCNDSYVSVSTLQEVLSEKVYILFFI 351
+ GHY AY+K ++ WY +DS+V ++L+ VL + Y+LF+
Sbjct: 285 -TMRGGHYVAYVKGSVNYEESEADDSPKGASTWYYISDSHVRKTSLEAVLQSEAYLLFYE 343
Query: 352 R 352
R
Sbjct: 344 R 344
>gi|157127579|ref|XP_001661099.1| ubiquitin specific protease 2, putative [Aedes aegypti]
gi|108872885|gb|EAT37110.1| AAEL010854-PA [Aedes aegypti]
Length = 934
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 162/343 (47%), Gaps = 30/343 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL N+GN+C++NS++QCL++T L NF L +Q T + + K + L
Sbjct: 605 GLWNIGNTCFMNSIIQCLSHTRELTNF--------LRQQSTTERGTSKDHKILAEYTKLI 656
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACH---NTCLRLK 144
K + + + P++++ + Q+DA EFLR+ ID+ H N ++ +
Sbjct: 657 KDMWSGTTRSVN---PSELKYAFSSKHRMYSGSAQQDAQEFLRFFIDSLHCALNESVKRE 713
Query: 145 KLRRKGGGSSGGGGGGETINGG------SSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ R T+ +S++K +F G L+S +KC C S D
Sbjct: 714 PINRAIEDDDMDNRVKATMMWDWYSRVENSMIKNLFVGLLRSTLKCTYCNGASVTFDPFW 773
Query: 199 DISLDILNS---CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVI 255
D+SL + ++ C L+ M F + EV+DG ++ C CK K ++I + P LVI
Sbjct: 774 DLSLPLPSTNSRCKLENCMDMFVKEEVMDGIDQPTCSRCKARRKCTKSLTIERFPKYLVI 833
Query: 256 QLKRF-EGIFGGKIDKAIAF---EEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
LKRF E + K+ + F E L L + + P Y L+G H G S G
Sbjct: 834 HLKRFSETRWSNKLTNVVEFPTGERELNLQPYASEDHSGPV-NYSLYGISNHMG-STAGG 891
Query: 312 HYYAYIKDAIGR-WYCCNDSYVSVSTLQEVLSEKVYILFFIRA 353
HY A K + + W ND++VS ++ + +++ Y+LF+ RA
Sbjct: 892 HYVAVCKHPVTKEWNEFNDNFVSETSERSLVTSSAYVLFYERA 934
>gi|255725706|ref|XP_002547782.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135673|gb|EER35227.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 543
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 165/338 (48%), Gaps = 33/338 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPL-ANFCLKLQHSSLCK----QLTGDSALDAERKRECP 82
G NLG +C+++S+LQ L + P + +F H C+ Q + +D C
Sbjct: 224 GFVNLGATCFMSSILQTLIHNPIIKYHFFNNDLHYFNCERGHNQDINNGFID--ENNACI 281
Query: 83 FCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFK---CGRQE-DAHEFLRYVIDACHN 138
C ++ I ++ LD A S + H K G QE DAHEF +++++ H
Sbjct: 282 TCSMD-NIFKTFFTSDNLDGFA--LSNFLATSWHKKKSLAGFQEQDAHEFFQFLLNELHI 338
Query: 139 TCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+RL +G + G S + ++G L+S ++C +C SN ++ +
Sbjct: 339 DHVRLMDTLGEGASETHGNSPC------SCISHSVYGFQLKSSIECDSCEYVSNTMEHVN 392
Query: 199 DISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLK 258
D+SL++ NS L + + +F + E L+ Y C C + + K + I P +L + LK
Sbjct: 393 DLSLELNNSGGLSDCLDQFTKAEHLE---HYTCTKCSSVKTTTKTLKIQTVPTVLTLHLK 449
Query: 259 RF-EGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPE----YKLFGTIVHSGFSPDSGHY 313
RF + KI+ I L LS + + PQP+ Y+LFG +VH G S +GHY
Sbjct: 450 RFKHDLNSTKIETKIEIPMFLNLSEY---CVEKPQPDVKQIYELFGVVVHEG-SISTGHY 505
Query: 314 YAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 351
YIK++ G WY C+DS VS+ EVL+ Y+LF+I
Sbjct: 506 TVYIKNS-GHWYKCDDSVVSLVNQDEVLNSNAYLLFYI 542
>gi|125591848|gb|EAZ32198.1| hypothetical protein OsJ_16406 [Oryza sativa Japonica Group]
Length = 562
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 167/380 (43%), Gaps = 69/380 (18%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSS-LCKQLT--GDSALDAERKRECPFC 84
GL NLGN+C++NSVLQ L + PPL N+ L +H+ LC + T + +A K C C
Sbjct: 183 GLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRYLCPRQTPMRRRSAEANDKAACLAC 242
Query: 85 ILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLK 144
L++ + S + T +PAK A + Q+DAHEF ++D H +
Sbjct: 243 DLDEIYSAAFSGERTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIH------E 296
Query: 145 KLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI 204
++ S G +G + +F G L+S V C CG S + MDISLD+
Sbjct: 297 NIKDDQHKSLAQG------HGDCCIAHRVFSGILRSDVTCTHCGFTSTTFEPCMDISLDL 350
Query: 205 ----------------------------LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKK 236
+L +++F + E LD K+ C+ CK+
Sbjct: 351 DAGYNNSLGVANPKVHVRNGERSSGGTNTKVSTLMRCLERFTRAERLDAEQKFFCERCKE 410
Query: 237 LVSARKQMSILQSPNILVIQLKRFEGI----FGGKIDKAIAFEEVLVLSSFM-------- 284
+ KQMSI + P + +KRFE K+D + F L ++ ++
Sbjct: 411 RQESLKQMSIRRLPLVSCFHIKRFEHSSVKKMSRKVDHCLQFPFSLDMAPYLSSSILRSR 470
Query: 285 ------------CKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYV 332
+ + E+++F I+HSG ++GHY Y++ WY C+D++V
Sbjct: 471 FGNRIFPSEASDADSVSEFSSEFEIFAVIMHSG-KLEAGHYVTYLR-LNNHWYKCDDAWV 528
Query: 333 SVSTLQEVLSEKVYILFFIR 352
+ V + + Y+LF+++
Sbjct: 529 TRVEEHTVRTSQAYMLFYVQ 548
>gi|410902432|ref|XP_003964698.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
2 [Takifugu rubripes]
Length = 511
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 175/399 (43%), Gaps = 75/399 (18%)
Query: 6 ELQMSWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLAN 53
E +W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +
Sbjct: 126 EKYTTWEPTKRELELLRHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRD 185
Query: 54 FCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIF 113
F L +H C+ + C C + + S + P ++ +
Sbjct: 186 FFLSDRHK--CEM----------QSNSCLVCEMSQLFQEFYSGHRSPHIPFRLLHLVWTH 233
Query: 114 AEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGG-SSGGGGGGETINGGSSVVKE 172
A H Q+DAHEFL +D H C KG G N + ++ +
Sbjct: 234 ARHLAGYEQQDAHEFLIAALDVLHRHC--------KGDTIRDDNGKKANNPNHCNCIIDQ 285
Query: 173 IFGGALQSQVKCLACGAESNKVDEIMDISLDI------------------LN-------S 207
IF G LQS V C C S +D DISLD+ +N S
Sbjct: 286 IFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGGDGGTMNGESHLSGS 345
Query: 208 CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFG 265
+L + +++F +PE L + K KC C + KQ+++ + P + LKRFE
Sbjct: 346 TTLTDCLRRFTRPEHLGSSAKIKCGGCHSYQESTKQLTLKKLPIVACFHLKRFEHSAKLR 405
Query: 266 GKIDKAIAFEEVLVLSSFMCKASQ--------------DPQPEYKLFGTIVHSGFSPDSG 311
KI ++F L ++ FM + + + +Y LF + H G + +SG
Sbjct: 406 RKITTYVSFPLELDMTPFMASSKESRMNGQYQQTVEVLNNDNKYSLFAVVNHQG-TLESG 464
Query: 312 HYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HY ++I+ +W+ C+D+ ++ +++++VL + Y+LF+
Sbjct: 465 HYTSFIRQHKDQWFKCDDAIITKASIKDVLDSEGYLLFY 503
>gi|391344661|ref|XP_003746614.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 64E-like
[Metaseiulus occidentalis]
Length = 918
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 156/328 (47%), Gaps = 52/328 (15%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL N +CYLNSVLQ L YTP N S+ + + P C
Sbjct: 9 PAGLVNQAMTCYLNSVLQTLFYTPEFRNALYACDFSA-----------EENPTKSIP-CQ 56
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFA-EHFKCGRQEDAHEFLRYVIDACHNTCLRLK 144
L++ +R + A+ S R F + + +Q D E R + DA L+
Sbjct: 57 LQRLFLR---LQCYPGTAAQTISLTRSFGWDSHEAWQQHDVQELCRVMFDA-------LE 106
Query: 145 KLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI 204
+K G + +++ ++ G+L+ VKC C ES + D DI+L +
Sbjct: 107 GALKKSGQQA-------------DLIERLYQGSLKDYVKCTECNNESAREDHYQDIALVV 153
Query: 205 LN------SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLK 258
SL EA+ F +PE L+G N+Y C+ CKK A K + + P IL +QLK
Sbjct: 154 RPFGSDKIYGSLIEALNGFVEPETLNGANQYHCEKCKKKCDALKGLKFVSFPKILTLQLK 213
Query: 259 RFEGIFGG----KIDKAIAFEEVLVLSSFMCKASQDPQPE--YKLFGTIVHSGFSPDSGH 312
RF+ + K++ + F EVL L+ F+ S+ P+ E Y LF ++HSG S + GH
Sbjct: 214 RFDFDYLTMRRIKLNDRVEFPEVLDLNGFI--ESKPPKTEYVYDLFAVLIHSG-SANGGH 270
Query: 313 YYAYIKDAIGRWYCCNDSYVSVSTLQEV 340
YYAYI++ W+C ND+ V TL++V
Sbjct: 271 YYAYIRNKTD-WFCFNDNQVHRVTLEDV 297
>gi|402913161|ref|XP_003919089.1| PREDICTED: inactive ubiquitin carboxyl-terminal hydrolase 17-like
protein 8-like, partial [Papio anubis]
Length = 249
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 109/198 (55%), Gaps = 30/198 (15%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS LC R + C C +E
Sbjct: 81 GLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQLC-----------HRHKCCMLCTME 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R+L P + + A F G+QEDAHEFL +++DA CL
Sbjct: 130 AHITRALHC------PGHVIQPSQALAAGFHRGKQEDAHEFLMFIVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDG 225
S+K+A+++ +PE L+G
Sbjct: 231 QSVKQALEQVVKPEELNG 248
>gi|195130331|ref|XP_002009605.1| GI15450 [Drosophila mojavensis]
gi|193908055|gb|EDW06922.1| GI15450 [Drosophila mojavensis]
Length = 1158
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 159/353 (45%), Gaps = 54/353 (15%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRN+GN+C++NSV+QCL++T L F L+ H++ + D + E
Sbjct: 833 GLRNIGNTCFMNSVIQCLSHTTELTRF-LRAHHTNTRTATSKDQQILYE---------FA 882
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
K I + ++ P +++ + Q+DA EFLR+ +D+ H+
Sbjct: 883 KLIQEMWTSNVHSVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHSAL------- 935
Query: 148 RKGGGSSGGGGGGETIN--------------------GGSSVVKEIFGGALQSQVKCLAC 187
G GET+N +S+++++F G L+S +KC C
Sbjct: 936 -------NTGVKGETLNIDDNLSDNKKADLTWEWYARHENSLIRDLFVGQLKSTLKCTTC 988
Query: 188 GAESNKVDEIMDISLDILNS--CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
G S D D+S+ + +S C L+ + F + EVLDG+ C CK K +
Sbjct: 989 GNTSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEVLDGDEMPTCSKCKTRRKCTKSFT 1048
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAF---EEVLVLSSFMCKASQDPQPEYKLFGTIV 302
I + P LVI LKRF K+ + F + L ++S+ A+ + Y L+
Sbjct: 1049 IQRFPKYLVIHLKRFSETRWSKLSNIVEFPTADRELNMASYGANANSNVH--YSLYAISN 1106
Query: 303 HSGFSPDSGHYYAYIKDAIGR-WYCCNDSYVSVSTLQEVL-SEKVYILFFIRA 353
H G S GHY A K + R W+ ND+ VS + + L S YILF+ RA
Sbjct: 1107 HMG-STAGGHYVAICKHPVSRKWHEFNDNSVSDAIPENCLVSSSAYILFYERA 1158
>gi|291413016|ref|XP_002722763.1| PREDICTED: ubiquitin specific peptidase 2 [Oryctolagus cuniculus]
Length = 607
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 162/340 (47%), Gaps = 28/340 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L +AL E F L
Sbjct: 270 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNAHTALMEE------FAKL 323
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL--- 143
+ I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN R+
Sbjct: 324 IQTIWTSSPNDVV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTAR 381
Query: 144 -----KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ L G + + S + ++F G L+S + C CG S D
Sbjct: 382 PKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFW 441
Query: 199 DISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
D+SL I +L + M+ F + +VLDG K C C+ K+ SI + P ILV
Sbjct: 442 DLSLPIAKRGYPEVTLMDCMRLFTKEDVLDGEEKPTCCRCRARKRCIKKFSIQRFPKILV 501
Query: 255 IQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
+ LKRF I K+ + F L L F + + Y L+ HSG + G
Sbjct: 502 LHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMGG 558
Query: 312 HYYAYIKD-AIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HY AY + A G W+ NDS V+ + +V + Y+LF+
Sbjct: 559 HYTAYCRSPATGEWHTFNDSSVTAMSSSQVRTSDAYLLFY 598
>gi|326933314|ref|XP_003212751.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Meleagris
gallopavo]
Length = 549
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 161/339 (47%), Gaps = 26/339 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRNLGN+C++NS+LQCL+ T L ++CL+ Q+ + L +S + E F L
Sbjct: 212 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQY---LRDLNNNSRMRTALMSE--FAKLI 266
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ + S D +P++ ++ ++ +A F Q+DA EFLR+++D H+ R+
Sbjct: 267 QLLWTSSPNDSV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHSEVNRVLVRP 324
Query: 148 RKGGGSSGGGGGGETING--------GSSVVKEIFGGALQSQVKCLACGAESNKVDEIMD 199
R + E S V ++F G L+S + C CG S D D
Sbjct: 325 RANADTLDHLPDDEKSRQMWRRYQEREDSRVSDLFVGQLKSSLTCSECGYCSTAFDPFWD 384
Query: 200 ISLDI----LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVI 255
+SL I +L + ++ F + +VLDG+ K C CK K+ SI + P ILV+
Sbjct: 385 LSLPIPKKGYGEVTLMDCLRLFTKEDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVL 444
Query: 256 QLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGH 312
LKRF I K+ + F + L L F ++ Y L+ HSG + GH
Sbjct: 445 HLKRFSEARIRASKLSTFVNFPLKDLDLREFASQSCN--HAVYNLYAVSNHSG-TTMGGH 501
Query: 313 YYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
Y AY K I W+ NDS V+ + V S Y+LF+
Sbjct: 502 YTAYCKSPISSEWHSFNDSRVTPMSSSHVRSSDAYLLFY 540
>gi|195392830|ref|XP_002055057.1| GJ19166 [Drosophila virilis]
gi|194149567|gb|EDW65258.1| GJ19166 [Drosophila virilis]
Length = 938
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 159/353 (45%), Gaps = 54/353 (15%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRN+GN+C++NSV+QCL++T L F L+ H+S + D + E
Sbjct: 613 GLRNIGNTCFMNSVIQCLSHTTELTRF-LRAHHTSTRTATSKDQQILHE---------FA 662
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
K I + ++ P +++ + Q+DA EFLR+ +D+ H+
Sbjct: 663 KLIQEMWTTNVHSVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHSAL------- 715
Query: 148 RKGGGSSGGGGGGETIN--------------------GGSSVVKEIFGGALQSQVKCLAC 187
G GET+N +S+++++F G L+S +KC C
Sbjct: 716 -------NTGVKGETLNIDDNLSDNKKADLTWEWYARHENSLIRDLFVGQLKSTLKCTTC 768
Query: 188 GAESNKVDEIMDISLDILNS--CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
G S D D+S+ + +S C L+ + F + EVLDG+ C CK K +
Sbjct: 769 GNTSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEVLDGDEMPTCSKCKTRRKCTKSFT 828
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAF---EEVLVLSSFMCKASQDPQPEYKLFGTIV 302
I + P LVI LKRF K+ + F + L ++S+ A+ + Y L+
Sbjct: 829 IQRFPKYLVIHLKRFSETRWSKLSNIVEFPTADRELNMASYGANANSNVH--YSLYAISN 886
Query: 303 HSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVL-SEKVYILFFIRA 353
H G S GHY A K + +W+ ND+ VS + + L S YILF+ RA
Sbjct: 887 HMG-STAGGHYVALCKHPVSHKWHEFNDNSVSDAIPENCLVSSSAYILFYERA 938
>gi|170581551|ref|XP_001895729.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
malayi]
gi|158597214|gb|EDP35423.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
malayi]
Length = 498
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 156/357 (43%), Gaps = 57/357 (15%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++N ++Q + +TP L ++ L Q ++ + K +C C L
Sbjct: 157 GLVNLGNTCFMNCIIQAIVHTPHLKDYFLTDQ--------HHCASSSSHSKAQCLMCELA 208
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
D+T P + + + A H Q+DAHEF +D H
Sbjct: 209 NTFQEFYKGDVTPYKPNRFLNLVWTHARHLAGYEQQDAHEFFIAALDVLHR--------- 259
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI--- 204
SG T N + ++ IF G LQS + C CG S VD DISLD+
Sbjct: 260 -----HSGSSSLPSTPNECNCIIDWIFTGKLQSDLTCSICGCVSTTVDPFWDISLDVAQE 314
Query: 205 -----------LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
+L++ + ++ PE L N K KC C+ + KQ+++ P +
Sbjct: 315 VLRSPSSSSGSPQQITLEDCLHRYIMPEHLGSNAKTKCARCETYEESTKQLTLKTLPMVA 374
Query: 254 VIQLKRFEGIFGG--KIDKAIAFEEVLVLS----SFMCKASQDPQP-------------- 293
LKRFE K+D I + + + ++ SF ++S P+
Sbjct: 375 CFHLKRFEHSHKDRKKMDTKIKYPQFIDMTPFTASFRERSSGAPESRTSIVTDLLTTNRN 434
Query: 294 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
+Y+LF + H G + +SGHY YI+ +W+ C+D V+ + VLS + Y+LF+
Sbjct: 435 KYELFAVVNHLG-TMESGHYTCYIRHQRNQWFQCDDQKVTKVPTERVLSSQGYLLFY 490
>gi|350413154|ref|XP_003489897.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Bombus
impatiens]
Length = 369
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 165/371 (44%), Gaps = 53/371 (14%)
Query: 11 WQPSLLSEKRKRGG----PP----LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSS 62
W + +S+ K G PP GL N GN+CY NSVLQ L + P L+ +
Sbjct: 15 WSGTNISQLEKDIGSDQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYK--- 71
Query: 63 LCKQLTGDSALDAERKRECPFCI--------LEKRIVRSLSVDLTLDAPAKIQSCLRIFA 114
A + K C+ +K+ V S+ AP K + LR
Sbjct: 72 ---------ARNKRTKETLLTCLADLFYSIATQKKKVGSI-------APKKFIARLRKEK 115
Query: 115 EHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIF 174
E F Q+DAHEFL ++I+ + L + + GG G G G + V EIF
Sbjct: 116 EEFDNYMQQDAHEFLNFLINHINEIILAERSQSKPTGGKCGAGDAGSP--PEPTWVHEIF 173
Query: 175 GGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNC 234
G L S+ +CL C S+K ++ D+ +D+ + S+ ++ F E L +NK+KCD+C
Sbjct: 174 QGILTSETRCLNCETVSSKDEDFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDHC 233
Query: 235 KKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQD---P 291
A+K+M + + P IL + LKRF+ + ++ V L + S D P
Sbjct: 234 SSYQEAQKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNP 293
Query: 292 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYV---SVSTLQEVL------- 341
Y L ++H G P+ GHY + +K + G W +D V ST+++
Sbjct: 294 DRLYDLVAVVIHCGSGPNRGHYISIVK-SHGFWLLFDDDMVDKIDASTIEDFYGLTSDIQ 352
Query: 342 --SEKVYILFF 350
SE YILF+
Sbjct: 353 KSSETGYILFY 363
>gi|322800426|gb|EFZ21430.1| hypothetical protein SINV_08883 [Solenopsis invicta]
Length = 604
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 171/367 (46%), Gaps = 56/367 (15%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSA----------LDAE 76
+GLRNLGN+C++N VLQ +++FC L + + D + +
Sbjct: 244 VGLRNLGNTCFMNVVLQSFN---NISHFCEYLTQMPCLEGIAFDESTGPPTHRGRIVTPG 300
Query: 77 RKRECPFC-ILEKRIVRSLSVDLTL---DAPAKIQSCLRI----FAEHFKCGRQEDAHEF 128
R +E L +R + + L+L + A CL + F+ +Q+DAHEF
Sbjct: 301 RAKEMSMSDALLAEELRKVLLGLSLGGSNGQAISPECLFLAIWKVVPRFRGYQQQDAHEF 360
Query: 129 LRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
L Y++D H L+L L R G G + G S+V +FGG L S V C+ C
Sbjct: 361 LTYMLDRLHTELLQL--LPRLGHEPLG-------LRGKQSIVTAVFGGTLLSVVHCMNCR 411
Query: 189 AESNKVDEIMDISLDILNS------------CSLKEAMQKFFQPEVLDGNNKYKCDNCKK 236
+S + D+SLDI + CSL ++ +FF+ E L + Y CDNC
Sbjct: 412 TDSKTHEPFQDLSLDIPDRLQRSRTKEQEEVCSLTYSLTRFFKVEELADSELYFCDNCMG 471
Query: 237 LVSARKQMSILQSPNILVIQLKRFEGI--FGGKIDKAIAFE-EVLVLSSFMCK------- 286
+ K+ I + PN+L + +KRF + K+D + F E L +S+F +
Sbjct: 472 KQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMESLDMSAFTVRGVTGTRL 531
Query: 287 ASQDPQPEYKLFGTIVHSGFSPDSGHYYAY-IKDAIGRWYCCNDSYVSVSTLQEVLSEKV 345
+Q+ Y L IVH G +GHY A+ + D G+W+ NDS V +T V K
Sbjct: 532 GAQNSHL-YDLAAVIVHHGSGAGTGHYTAFAVHD--GQWFHFNDSSVRPATTDAVAKCKP 588
Query: 346 YILFFIR 352
YILF++R
Sbjct: 589 YILFYVR 595
>gi|66501571|ref|XP_392160.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Apis
mellifera]
Length = 541
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 167/361 (46%), Gaps = 49/361 (13%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDS-------ALDAERKR 79
+GLRNLGN+C++N VLQ +++FC L + + D + R +
Sbjct: 186 VGLRNLGNTCFMNVVLQSFN---NISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAK 242
Query: 80 ECPFCILEKRIVRSLSVDLTL---DAPAKIQSCLRIF----AEHFKCGRQEDAHEFLRYV 132
E L +R + + L L + A CL + F+ +Q+DAHEFL Y+
Sbjct: 243 EFMSDALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGYQQQDAHEFLTYM 302
Query: 133 IDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESN 192
+D H L+L L R G G + G S+V +FGG L S V C+ C +S
Sbjct: 303 LDRLHTELLQL--LPRLGHEPLG-------LRGKQSIVTAVFGGTLLSVVHCMNCRTDSK 353
Query: 193 KVDEIMDISLDILNS-----------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSAR 241
+ D+SLDI + CSL ++ +FF+ E L + Y CDNC +
Sbjct: 354 THEPFQDLSLDIPDRLQRRTKEQEEVCSLTYSLTRFFKVEELADSELYFCDNCMGKQRST 413
Query: 242 KQMSILQSPNILVIQLKRFEGI--FGGKIDKAIAFE-EVLVLSSFMCKASQDPQ------ 292
K+ I + PN+L + +KRF + K+D + F + L +S+F + +
Sbjct: 414 KRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMKSLDMSAFTVRGVNGTKLGASNS 473
Query: 293 PEYKLFGTIVHSGFSPDSGHYYAY-IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 351
Y L IVH G +GHY A+ + D G+W+ NDS V +T V K YILF++
Sbjct: 474 HLYDLAAVIVHHGSGAGTGHYTAFAVHD--GQWFHFNDSSVRPATTDAVAKCKPYILFYV 531
Query: 352 R 352
R
Sbjct: 532 R 532
>gi|380013085|ref|XP_003690600.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Apis
florea]
Length = 542
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 167/361 (46%), Gaps = 49/361 (13%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDS-------ALDAERKR 79
+GLRNLGN+C++N VLQ +++FC L + + D + R +
Sbjct: 187 VGLRNLGNTCFMNVVLQSFN---NISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAK 243
Query: 80 ECPFCILEKRIVRSLSVDLTL---DAPAKIQSCLRIF----AEHFKCGRQEDAHEFLRYV 132
E L +R + + L L + A CL + F+ +Q+DAHEFL Y+
Sbjct: 244 EFMSDALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGYQQQDAHEFLTYM 303
Query: 133 IDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESN 192
+D H L+L L R G G + G S+V +FGG L S V C+ C +S
Sbjct: 304 LDRLHTELLQL--LPRLGHEPLG-------LRGKQSIVTAVFGGTLLSVVHCMNCRTDSK 354
Query: 193 KVDEIMDISLDILNS-----------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSAR 241
+ D+SLDI + CSL ++ +FF+ E L + Y CDNC +
Sbjct: 355 THEPFQDLSLDIPDRLQRRTKEQEEVCSLTYSLTRFFKVEELADSELYFCDNCMGKQRST 414
Query: 242 KQMSILQSPNILVIQLKRFEGI--FGGKIDKAIAFE-EVLVLSSFMCKASQDPQ------ 292
K+ I + PN+L + +KRF + K+D + F + L +S+F + +
Sbjct: 415 KRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMKSLDMSAFTVRGVNGTKLGASNS 474
Query: 293 PEYKLFGTIVHSGFSPDSGHYYAY-IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 351
Y L IVH G +GHY A+ + D G+W+ NDS V +T V K YILF++
Sbjct: 475 HLYDLAAVIVHHGSGAGTGHYTAFAVHD--GQWFHFNDSSVRPATTDAVAKCKPYILFYV 532
Query: 352 R 352
R
Sbjct: 533 R 533
>gi|194212776|ref|XP_001501250.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Equus
caballus]
Length = 606
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 163/340 (47%), Gaps = 28/340 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L +AL E F L
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNAHTALMEE------FAKL 322
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL--- 143
+ I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN R+
Sbjct: 323 IQTIWTSSPNDVV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVR 380
Query: 144 -----KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ L G + + S + ++F G L+S + C CG S D
Sbjct: 381 PKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFW 440
Query: 199 DISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
D+SL I +L + M+ F + +VLDG+ K C C+ K+ SI + P ILV
Sbjct: 441 DLSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILV 500
Query: 255 IQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
+ LKRF I K+ + F L L F + + Y L+ HSG + G
Sbjct: 501 LHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMGG 557
Query: 312 HYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HY AY + + G W+ NDS V+ + +V + Y+LF+
Sbjct: 558 HYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 597
>gi|170594964|ref|XP_001902192.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
malayi]
gi|158590256|gb|EDP28954.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
malayi]
Length = 656
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 168/335 (50%), Gaps = 38/335 (11%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCIL 86
+GL N N C+LN+VLQ + + P A + L + L S + ++C C L
Sbjct: 309 VGLCNYSNDCFLNAVLQIILHCIPFARY--------LGEHLPLFSCV-----KDCVACGL 355
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCL-RIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
+ I S+S PA I L + F H G QEDAHE L +++DA +
Sbjct: 356 ARFIRYSMSSRQPF-KPAWISFILEKAFPSHL-LGAQEDAHEALNHILDALDSEA----- 408
Query: 146 LRRKGGGSSGGGGGGETINGG--SSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLD 203
+ G SS + +NG S+ V+++F G L++Q++C AC A + +++L
Sbjct: 409 ---RNGMSSSDRNFSDPLNGPRFSTPVEQLFVGTLRNQIQCSACSAILINYERFRELNLG 465
Query: 204 ILNS-----CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLK 258
I + +L++ + +F EVL N +KC NCK+ ++ IL++PN+L+IQ+K
Sbjct: 466 IKKTGYDRRITLEDLLDDYFGSEVL---NSFKCTNCKRTTQIQRSSRILRAPNLLLIQIK 522
Query: 259 RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIK 318
RF FGGKI + F L L ++ + + Y+L G + H G + + GHY A ++
Sbjct: 523 RFNS-FGGKIGVHVNFNLRLDLEQYIHRGGE--SHVYELTGIVQHMGNAVEHGHYIAVVR 579
Query: 319 DAIGR-WYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
GR +Y +D +L E+ + + Y+L ++R
Sbjct: 580 GFDGRSYYMFDDEQRHRVSLSELHNTQAYMLLYVR 614
>gi|74179937|dbj|BAE36525.1| unnamed protein product [Mus musculus]
Length = 482
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 160/356 (44%), Gaps = 66/356 (18%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRNLGN+C++N++LQ L S ++ RK C
Sbjct: 160 GLRNLGNTCFMNAILQSLR------------------------SLVEEFRKTLCAL---- 191
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACH-------NTC 140
T +P + + +F+ +Q+DAHEF+RY++D H N
Sbjct: 192 ------WQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGV 245
Query: 141 LRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDI 200
R L+ K S+ ING S+VV IFGG LQ++V CL CG ES K D +D+
Sbjct: 246 SRSAILQEK---STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDL 302
Query: 201 SLDILNS--------------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSI 246
SLDI + CSL++ ++ F E LD Y C CKK + K+ I
Sbjct: 303 SLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWI 362
Query: 247 LQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPE---YKLFGT 300
+ P L + LKRF K+D + F L + ++ + ++ P+ Y L
Sbjct: 363 QKLPKALCLHLKRFHWTAYLRNKVDTYVQFPLRGLDMKCYLLEP-ENSGPDSCLYDLAAV 421
Query: 301 IVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
+VH G SGHY AY GRW+ NDS V+V+ + V K YILF++ R
Sbjct: 422 VVHHGSGVGSGHYTAYAVHE-GRWFHFNDSTVTVTDEETVGKAKAYILFYVERQAR 476
>gi|340721026|ref|XP_003398928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Bombus
terrestris]
Length = 541
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 166/361 (45%), Gaps = 49/361 (13%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDS-------ALDAERKR 79
+GLRNLGN+C++N VLQ +++FC L + + D + R +
Sbjct: 186 VGLRNLGNTCFMNVVLQSFN---NISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAK 242
Query: 80 ECPFCILEKRIVRSLSVDLTL---DAPAKIQSCLRIF----AEHFKCGRQEDAHEFLRYV 132
E L +R + + L L + A CL + F+ +Q+DAHEFL Y+
Sbjct: 243 EFMSDALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGYQQQDAHEFLTYM 302
Query: 133 IDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESN 192
+D H L+L L R G G + G S+V +FGG L S V C+ C +S
Sbjct: 303 LDRLHTELLQL--LPRLGHEPLG-------LRGKQSIVTAVFGGTLLSVVHCMNCRTDSK 353
Query: 193 KVDEIMDISLDILNS-----------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSAR 241
+ D+SLDI + CSL ++ +FF+ E L + Y CDNC +
Sbjct: 354 THEPFQDLSLDIPDRLQRRTKEQEEVCSLTYSLTRFFKVEELADSELYFCDNCMGKQRST 413
Query: 242 KQMSILQSPNILVIQLKRFEGI--FGGKIDKAIAFE-EVLVLSSFMC------KASQDPQ 292
K+ I + PN+L + +KRF + K+D + F + L +S+F K
Sbjct: 414 KRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMKSLDMSAFTVRGVSGTKLGASNS 473
Query: 293 PEYKLFGTIVHSGFSPDSGHYYAY-IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 351
Y L IVH G +GHY A+ + D G+W+ NDS V +T V K YILF++
Sbjct: 474 HLYDLAAVIVHHGSGAGTGHYTAFAVHD--GQWFHFNDSSVRPATTDAVAKCKPYILFYV 531
Query: 352 R 352
R
Sbjct: 532 R 532
>gi|256088992|ref|XP_002580603.1| ubiquitin-specific peptidase 2 (C19 family) [Schistosoma mansoni]
Length = 756
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 161/339 (47%), Gaps = 21/339 (6%)
Query: 22 RGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKREC 81
RGG +GL NLGN+C++NS+LQCL+ T PL +CL+ K + S+++
Sbjct: 158 RGGL-VGLNNLGNTCFMNSILQCLSNTAPLTEYCLE---DRFLKDINKSSSMNGLLFHS- 212
Query: 82 PFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL 141
+ L K I + + +P++ +S ++ FA F Q+D+ EFLRYV++ H
Sbjct: 213 -YADLMKEIWDPDMANSST-SPSRFKSQIQRFAPRFMGYSQQDSQEFLRYVLEGLHMEVN 270
Query: 142 RLKKLRRKGGGSSGGGGGGETIN--------GGSSVVKEIFGGALQSQVKCLACGAESNK 193
R++K E N +S + ++F G L S ++C C +S
Sbjct: 271 RVQKRPNPIKPDYEAEDYNEKANLYWRRYLSMDNSEIVDLFVGQLMSTLECGECSFKSTT 330
Query: 194 VDEIMDISLDIL--NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPN 251
D D+SL I ++ S+ + + F E LDGN + C CK K SI + P
Sbjct: 331 FDPFWDLSLPIPKKSNVSILDCLNLFTSKEELDGNERPICSRCKTRRRCAKSFSIQKFPQ 390
Query: 252 ILVIQLKRFEG-IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPD 309
ILV+ LKRF G F K+ + + L L F + +YKL+ HSG S
Sbjct: 391 ILVLHLKRFSGERFRSKMSVMVDYPLRNLDLIGFATSSCTQKSAQYKLYAVSNHSG-SVY 449
Query: 310 SGHYYAY-IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
+GHY A + G W+ NDS+V + V+S + Y+
Sbjct: 450 TGHYTASCLNPYTGDWHSFNDSHVHAISENSVVSAEGYV 488
>gi|350404719|ref|XP_003487196.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Bombus
impatiens]
Length = 541
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 166/361 (45%), Gaps = 49/361 (13%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDS-------ALDAERKR 79
+GLRNLGN+C++N VLQ +++FC L + + D + R +
Sbjct: 186 VGLRNLGNTCFMNVVLQSFN---NISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAK 242
Query: 80 ECPFCILEKRIVRSLSVDLTL---DAPAKIQSCLRIF----AEHFKCGRQEDAHEFLRYV 132
E L +R + + L L + A CL + F+ +Q+DAHEFL Y+
Sbjct: 243 EFMSDALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGYQQQDAHEFLTYM 302
Query: 133 IDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESN 192
+D H L+L L R G G + G S+V +FGG L S V C+ C +S
Sbjct: 303 LDRLHTELLQL--LPRLGHEPLG-------LRGKQSIVTAVFGGTLLSVVHCMNCRTDSK 353
Query: 193 KVDEIMDISLDILNS-----------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSAR 241
+ D+SLDI + CSL ++ +FF+ E L + Y CDNC +
Sbjct: 354 THEPFQDLSLDIPDRLQRRTKEQEEVCSLTYSLTRFFKVEELADSELYFCDNCMGKQRST 413
Query: 242 KQMSILQSPNILVIQLKRFEGI--FGGKIDKAIAFE-EVLVLSSFMC------KASQDPQ 292
K+ I + PN+L + +KRF + K+D + F + L +S+F K
Sbjct: 414 KRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMKSLDMSAFTVRGVSGTKLGASNS 473
Query: 293 PEYKLFGTIVHSGFSPDSGHYYAY-IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 351
Y L IVH G +GHY A+ + D G+W+ NDS V +T V K YILF++
Sbjct: 474 HLYDLAAVIVHHGSGAGTGHYTAFAVHD--GQWFHFNDSSVRPATTDAVAKCKPYILFYV 531
Query: 352 R 352
R
Sbjct: 532 R 532
>gi|3800764|gb|AAC68865.1| ubiquitin specific protease 66 [Gallus gallus]
Length = 587
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 161/339 (47%), Gaps = 26/339 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRNLGN+C++NS+LQCL+ T L ++CL+ Q+ + L +S + E F L
Sbjct: 47 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQY---LRDLNNNSRMRTPLMSE--FAKLI 101
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ + S D +P++ ++ ++ +A F Q+DA EFLR+++D H R+
Sbjct: 102 QLLWTSSPNDSV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHGEVNRVLVRP 159
Query: 148 RKGGGSSGGGGGGETING--------GSSVVKEIFGGALQSQVKCLACGAESNKVDEIMD 199
R + E S V ++F G L+S + C CG S D D
Sbjct: 160 RANADTLDHLPDDEKSRQMWRRYQEREDSRVSDLFVGQLKSSLTCSECGYCSTAFDPFWD 219
Query: 200 ISLDI----LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVI 255
+SL I +L + ++ F + +VLDG+ K C CK K+ SI + P ILV+
Sbjct: 220 LSLPIPKKGYGEVTLMDCLRLFTKEDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVL 279
Query: 256 QLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGH 312
LKRF I K+ + F + L L F ++ Y L+ HSG + GH
Sbjct: 280 HLKRFSEARIRASKLTTFVNFPLKDLDLREFASQSCN--HAVYNLYAVANHSGTT-MGGH 336
Query: 313 YYAYIKDA-IGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
Y AY K+ + W+ NDS V+ + V S Y+LF+
Sbjct: 337 YTAYCKEPHLQEWHSFNDSRVTPMSSSHVRSSDAYLLFY 375
>gi|393213328|gb|EJC98825.1| cysteine proteinase [Fomitiporia mediterranea MF3/22]
Length = 846
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 156/343 (45%), Gaps = 24/343 (6%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSS--LCKQLTGDSALDAERKRECP-- 82
GL N GN+CY+NSV Q L + P ++ S G + L P
Sbjct: 40 FGLENFGNTCYVNSVFQALYFCHPFRELIIQAHDKSNPPVTNSNGSAPLTGPPIPIAPPT 99
Query: 83 -FCILEKRIVR--SLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNT 139
F L V S S+D + AP L+ E F+ +DAHEFL Y+++
Sbjct: 100 MFSALRALFVHISSNSLDKGVVAPRAFVEKLKKENELFRSSMHQDAHEFLIYLLNKIAED 159
Query: 140 CLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMD 199
++ R GSS G + S++V ++F G L S+ +CL C S++ + +D
Sbjct: 160 LE--EEARNVRSGSSSGEDRKTNSSTNSNIVHDLFEGVLTSETRCLTCETVSSRDEAFLD 217
Query: 200 ISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
+S+DI + S+ +++F E+L NK+ CD+C L A K+M I + PN+L + LKR
Sbjct: 218 LSIDIEQNSSVTACLRQFSASEMLCQKNKFFCDSCCGLQEAEKRMKIKRLPNVLALHLKR 277
Query: 260 F--EGIFGGKIDKAIAFEEVLVLSSF-MCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAY 316
F + G I A L L F + DP Y+LF ++H G P GHY A
Sbjct: 278 FKYQEDVGKYIKLAYRVAFPLELRLFNTADDAVDPDRLYELFAIVIHIGNGPYHGHYVAI 337
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEK---------VYILFF 350
+K + W +D SV ++E K Y+LF+
Sbjct: 338 VK-SNESWLVFDDD--SVEKIKESDISKYYGDSNSGAAYVLFY 377
>gi|302794831|ref|XP_002979179.1| hypothetical protein SELMODRAFT_2719 [Selaginella moellendorffii]
gi|300152947|gb|EFJ19587.1| hypothetical protein SELMODRAFT_2719 [Selaginella moellendorffii]
Length = 350
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 162/358 (45%), Gaps = 43/358 (12%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCIL 86
+GL N GN+C+LNS LQCL +T PL++ L + + A R+ +
Sbjct: 2 VGLMNEGNTCFLNSCLQCLAHTVPLSSAIL----GPFSELIQTKGAAARSRRDTASLSEM 57
Query: 87 EKRIVRSLSVDL-------TLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNT 139
R L DL T A +QS L+ + F RQ DA E +R +ID H
Sbjct: 58 LAYSFRQLLKDLCGKPSYSTASASMLLQS-LQGLSPQFAGNRQHDAQEAMRTIIDGLHEA 116
Query: 140 CLRLKKLRRKGGGSSGGGGGGETIN--------GGSSVVKEIFGGALQSQVKCLACGAES 191
R R K E + +S+ G LQS ++C C +S
Sbjct: 117 LNRKPPGRPKCPEPPPTTPEAEIADICWEHHKMWNNSLTISCLTGQLQSAIECSVCHRKS 176
Query: 192 NKVDEIMDISLDILNS---------------CSLKEAMQKFFQPEVLDGNNKYKCDNCKK 236
+ D +D+SL + S ++++ + F PE LD +NKY C CK
Sbjct: 177 HCFDPFLDLSLPLSKSGGSDNFRTFGSSRSRMTIEDCLSAFVAPETLDPSNKYYCSGCKA 236
Query: 237 LVSARKQMSILQSPNILVIQLKRFEGI---FGGKIDKAIAFE-EVLVLSSFMCKASQDPQ 292
+ K++SI ++P++LV+ +KRF G+ K D+ + + L LSSFM SQ Q
Sbjct: 237 PQISTKKLSIYRAPSVLVLHIKRFYGVEPRSYRKDDRPVVYPLNGLDLSSFMRHLSQQ-Q 295
Query: 293 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
Y L+G H G S GHY A + WYC NDS SV+++Q+ + YILF+
Sbjct: 296 ATYDLYGVCSHFG-SLGYGHYTATCRSVDNGWYCYNDS--SVTSVQDPVDSSAYILFY 350
>gi|226531818|ref|NP_001142184.1| uncharacterized protein LOC100274352 [Zea mays]
gi|194703162|gb|ACF85665.1| unknown [Zea mays]
gi|194707512|gb|ACF87840.1| unknown [Zea mays]
gi|414865257|tpg|DAA43814.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 366
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 154/330 (46%), Gaps = 19/330 (5%)
Query: 16 LSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDA 75
L E+ G GL N GN+CY NSVLQ L + P + L+ ++ + TGD
Sbjct: 12 LGEQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFRDQLLEYYANN---KNTGDVE--- 65
Query: 76 ERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDA 135
E C + + + S + AP + L+ E F+ +DAHEFL ++++
Sbjct: 66 ENMLTCLADLFSQ--ISSQKKKTGVIAPKRFIQRLKKQNEIFRSYMHQDAHEFLNFLLNE 123
Query: 136 C-------HNTC---LRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
HN L+ L++ G G G + V + F G L ++ +CL
Sbjct: 124 LVDILEKEHNAARESLQNLSLQKNSNGPIDGQPNGSHKELAVTWVHKCFQGILTNETRCL 183
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
C +++ + D+SLDI + SL ++ F E L+ +K+ CD C L A+K+M
Sbjct: 184 RCETVTDRDETFFDLSLDIEQNSSLTSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMK 243
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
I + PNILVI LKRF+ I + K +++ V L + + EY LF +VH G
Sbjct: 244 IKKPPNILVIHLKRFKYIEQLQRYKKLSYRVVFPLELKLLNTVDNSDLEYSLFAVVVHVG 303
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVS 335
P+ GHY + +K + W +D V ++
Sbjct: 304 SGPNHGHYISLVK-SHNHWLFFDDENVEMT 332
>gi|260836461|ref|XP_002613224.1| hypothetical protein BRAFLDRAFT_210578 [Branchiostoma floridae]
gi|229298609|gb|EEN69233.1| hypothetical protein BRAFLDRAFT_210578 [Branchiostoma floridae]
Length = 346
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 174/341 (51%), Gaps = 25/341 (7%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCIL 86
+GLRNLGN+C++NS+LQCL++T LA++C+ + K +S++ + F L
Sbjct: 6 VGLRNLGNTCFMNSILQCLSHTKQLADYCMNENYIFDLKD--SNSSMKGALMK--AFANL 61
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLK-- 144
+++ R S ++ P+ ++ ++ FA F Q+D+ EFLR++++ H+ +++
Sbjct: 62 IRQMWRGSSDAVS---PSAFKAQIQKFAPRFVGYNQQDSQEFLRFLLEGLHDDINKVQVK 118
Query: 145 ---------KLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVD 195
++ + + + +S + ++F G L+S ++C C S D
Sbjct: 119 PKPSYSDDEEIEKLSDERKARHAWNKYLLRDNSQITDLFVGQLKSVLQCTHCQHCSVTFD 178
Query: 196 EIMDISLDI--LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
D+SL I +S +++ ++ F + E+LDG+ K C CK K+ + + P IL
Sbjct: 179 PFWDLSLPIPKKSSIDVRDCLRDFVEEEILDGDEKPTCSKCKARRKCTKRFFLQRLPKIL 238
Query: 254 VIQLKRFEGI-FGGKIDKAIAFEEV-LVLSSFMCKASQDPQP-EYKLFGTIVHSGFSPDS 310
V+ LKRF G+ + K+ + F L L F C S+ P Y L+ HSG +
Sbjct: 239 VLHLKRFSGMRYRQKLSTTVNFPLAKLNLQEFTCPESRGSAPATYDLYAVSNHSG-TTFG 297
Query: 311 GHYYAYIK-DAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
GHY AY K G W+C NDS VS + V+S + Y+LF+
Sbjct: 298 GHYTAYCKYPTTGDWHCFNDSRVSSISASSVISSEAYVLFY 338
>gi|395848444|ref|XP_003796860.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Otolemur
garnettii]
Length = 606
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 164/340 (48%), Gaps = 28/340 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L + +AL E F L
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHGSSAHTALMEE------FAKL 322
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL--- 143
+ I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN R+
Sbjct: 323 IQTIWTSSPNDVV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAPR 380
Query: 144 -----KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ L G + + S + ++F G L+S + C CG S D
Sbjct: 381 PKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFW 440
Query: 199 DISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
D+SL I +L + M+ F + +VLDG+ K C C+ K+ SI + P ILV
Sbjct: 441 DLSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILV 500
Query: 255 IQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
+ LKRF I K+ + F L L F + + Y L+ HSG + G
Sbjct: 501 LHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMGG 557
Query: 312 HYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HY AY + + G W+ NDS V+ + +V + Y+LF+
Sbjct: 558 HYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 597
>gi|383856530|ref|XP_003703761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Megachile
rotundata]
Length = 354
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 158/353 (44%), Gaps = 49/353 (13%)
Query: 25 PP----LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
PP GL N GN+CY NSVLQ L + P L+ + A + K
Sbjct: 18 PPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYK------------ARNKRTKET 65
Query: 81 CPFCI--------LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYV 132
C+ +K+ V S+ AP K + LR E F Q+DAHEFL ++
Sbjct: 66 LLTCLADLFYSIATQKKKVGSI-------APKKFIARLRKEKEEFDNYMQQDAHEFLNFL 118
Query: 133 IDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESN 192
I+ + L + + GG G G G + V EIF G L S+ +CL C S+
Sbjct: 119 INHINEIILAERNQSKPAGGKCGAGDAGSP--PEPTWVHEIFQGILTSETRCLNCETVSS 176
Query: 193 KVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNI 252
K ++ D+ +D+ + S+ ++ F E L +NK+KCD+C A+K+M + + P I
Sbjct: 177 KDEDFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDHCSSYQEAQKRMRVKKLPMI 236
Query: 253 LVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQD---PQPEYKLFGTIVHSGFSPD 309
L + LKRF+ + ++ V L + S D P Y L ++H G P+
Sbjct: 237 LALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPN 296
Query: 310 SGHYYAYIKDAIGRWYCCNDSYV---SVSTLQEVL---------SEKVYILFF 350
GHY + +K + G W +D V ST+++ SE YILF+
Sbjct: 297 RGHYISIVK-SHGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSSETGYILFY 348
>gi|302813726|ref|XP_002988548.1| hypothetical protein SELMODRAFT_2558 [Selaginella moellendorffii]
gi|300143655|gb|EFJ10344.1| hypothetical protein SELMODRAFT_2558 [Selaginella moellendorffii]
Length = 350
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 162/358 (45%), Gaps = 43/358 (12%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCIL 86
+GL N GN+C+LNS LQCL +T PL++ L + + A R+ +
Sbjct: 2 VGLMNEGNTCFLNSCLQCLAHTVPLSSAIL----GPFSELIQTKGAAARSRRDTASLSEM 57
Query: 87 EKRIVRSLSVDL-------TLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNT 139
R L DL T A +QS L+ + F RQ DA E +R +ID H
Sbjct: 58 LAYSFRQLLKDLCGKPSYSTASASMLLQS-LQGLSPQFAGNRQHDAQEAMRTIIDGLHEA 116
Query: 140 CLRLKKLRRKGGGSSGGGGGGETIN--------GGSSVVKEIFGGALQSQVKCLACGAES 191
R R K E + +S+ G LQS ++C C +S
Sbjct: 117 LNRKPPGRPKCPEPPPTTPEAEIADICWEHHKMWNNSLTISCLTGQLQSTIECSVCHRKS 176
Query: 192 NKVDEIMDISLDILNS---------------CSLKEAMQKFFQPEVLDGNNKYKCDNCKK 236
+ D +D+SL + S ++++ + F PE LD +NKY C CK
Sbjct: 177 HCFDPFLDLSLPLSKSGGSDNFRNFGSSRSRMTIEDCLSAFVAPETLDPSNKYYCSGCKA 236
Query: 237 LVSARKQMSILQSPNILVIQLKRFEGI---FGGKIDKAIAFE-EVLVLSSFMCKASQDPQ 292
+ K++SI ++P++LV+ +KRF G+ K D+ + + L LSSFM SQ Q
Sbjct: 237 PQISTKKLSIYRAPSVLVLHIKRFYGVEPRSYRKDDRPVVYPLNGLDLSSFMRHFSQQ-Q 295
Query: 293 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
Y L+G H G S GHY A + WYC NDS SV+++Q+ + YILF+
Sbjct: 296 ATYDLYGVCSHFG-SLGYGHYTATCRSVDNGWYCYNDS--SVTSVQDPVDSSAYILFY 350
>gi|123471494|ref|XP_001318946.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121901718|gb|EAY06723.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 446
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 156/350 (44%), Gaps = 35/350 (10%)
Query: 5 HELQMSWQPSLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLC 64
H W L+ E P GL NLGNSC+LNSVLQCL YTP L L + L
Sbjct: 28 HYFSKEWASRLIEENPIEE-PFGGLHNLGNSCFLNSVLQCLAYTPGLEKLSNSLPNVIL- 85
Query: 65 KQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQED 124
+ +G S + C + +R L + AP + +R + +CG Q+D
Sbjct: 86 ENCSGKSCFLYHFGQLC-------KALRRLPIA----APHIFFANMRQISSDMECGVQQD 134
Query: 125 AHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKC 184
AHE+L +++ + C R K + + V FGG + C
Sbjct: 135 AHEYLFALLNHFDDEC-RAPKENKAATYDTP--------------VDSFFGGLFRETKIC 179
Query: 185 LACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQM 244
CG + DI+L L++ +L + F +P + N Y C++CK+ + +
Sbjct: 180 ARCGHNDQTTSKFYDITLP-LDADTLDGCFESFMKPRNVGSN--YICEHCKQAGTCSTRT 236
Query: 245 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHS 304
+PNIL+I + RF K ++ + F + L F+ + Y+LF I HS
Sbjct: 237 KFADTPNILIITMMRFTATVN-KDERQVDFGLNIDLKEFV---EDGVEHFYELFAVINHS 292
Query: 305 GFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRAN 354
G + GH+ ++K G WY C+D+ ++ T Q VL K Y+LF+ R +
Sbjct: 293 GHQVNRGHFTCFVKCNGGSWYNCDDTKITKDTAQNVLDSKPYVLFYKRVH 342
>gi|66530407|ref|XP_625039.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Apis
mellifera]
gi|380023380|ref|XP_003695501.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Apis
florea]
Length = 354
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 158/353 (44%), Gaps = 49/353 (13%)
Query: 25 PP----LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
PP GL N GN+CY NSVLQ L + P L+ + A + K
Sbjct: 18 PPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYK------------ARNKRTKET 65
Query: 81 CPFCI--------LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYV 132
C+ +K+ V S+ AP K + LR E F Q+DAHEFL ++
Sbjct: 66 LLTCLADLFYSIATQKKKVGSI-------APKKFIARLRKEKEEFDNYMQQDAHEFLNFL 118
Query: 133 IDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESN 192
I+ + L + + GG G G G + V EIF G L S+ +CL C S+
Sbjct: 119 INHINEIILAERSQSKPAGGKCGAGDAGSP--PEPTWVHEIFQGILTSETRCLNCETVSS 176
Query: 193 KVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNI 252
K ++ D+ +D+ + S+ ++ F E L +NK+KCD+C A+K+M + + P I
Sbjct: 177 KDEDFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDHCSSYQEAQKRMRVKKLPMI 236
Query: 253 LVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQD---PQPEYKLFGTIVHSGFSPD 309
L + LKRF+ + ++ V L + S D P Y L ++H G P+
Sbjct: 237 LALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPN 296
Query: 310 SGHYYAYIKDAIGRWYCCNDSYV---SVSTLQEVL---------SEKVYILFF 350
GHY + +K + G W +D V ST+++ SE YILF+
Sbjct: 297 RGHYISIVK-SHGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSSETGYILFY 348
>gi|323307659|gb|EGA60924.1| Ubp8p [Saccharomyces cerevisiae FostersO]
Length = 471
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 168/362 (46%), Gaps = 46/362 (12%)
Query: 14 SLLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSAL 73
+++ +R G GL +G++C+++S+LQCL + P + HS+ CK + D
Sbjct: 125 TMVPSMERRDGLS-GLIXMGSTCFMSSILQCLIHNPYFIRHSMSQIHSNNCKVRSPD--- 180
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAK-------------IQSCLRIFAEHFKCG 120
+C C L+K IV L L + + +C ++
Sbjct: 181 ------KCFSCALDK-IVHELYGALNTKQASSSSTSTNRQTGFIYLLTCAWKINQNLAGY 233
Query: 121 RQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQS 180
Q+DAHEF +++I+ H + + L S E I V +F G+L+S
Sbjct: 234 SQQDAHEFWQFIINQIHQS--YVLDLPNAKEVSRANNKQCECI------VHTVFEGSLES 285
Query: 181 QVKCLACGAES-NKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVS 239
+ C C S +D +D+SLDI + L E + F + E L N Y C C
Sbjct: 286 SIVCPGCQNNSKTTIDPFLDLSLDIKDKKKLYECLDSFHKKEQLKDFN-YHCGECNSTQD 344
Query: 240 ARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQDPQPE-- 294
A KQ+ I + P++LV+QLKRFE + G K+D I F L + ++ +D E
Sbjct: 345 AIKQLGIHKLPSVLVLQLKRFEHLLNGSNRKLDDFIEFPTYLNMKNYCSTKEKDKHSENG 404
Query: 295 ------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 348
Y+L G + H G + + GHY A+ K + G+W+ NDS VS + EVL E+ Y+L
Sbjct: 405 KVPDIIYELIGIVSHKG-TVNEGHYIAFCKISGGQWFKFNDSMVSSISQAEVLKEQAYLL 463
Query: 349 FF 350
F+
Sbjct: 464 FY 465
>gi|255579847|ref|XP_002530760.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223529676|gb|EEF31620.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
Length = 577
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 172/388 (44%), Gaps = 75/388 (19%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSL-CKQLTG-------DSALDAERKR 79
GL NLGN+C++NSVLQ L +TPPL N+ L +H+ C+Q+ ++ + + +
Sbjct: 188 GLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRYYCQQMKNGVNNGAFNNNSNNKNAK 247
Query: 80 ECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNT 139
C C L+ S D +PAK A + Q+DAHEF ++D H
Sbjct: 248 LCLACDLDAMFSAVFSGDRMPYSPAKFLYSWWQHASNLASYEQQDAHEFFISMLDGIHE- 306
Query: 140 CLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMD 199
++K + S G +G + IF G L+S V C+ACG S D +D
Sbjct: 307 --KIKVEKDLCKPHSQG-------HGDCCIAHRIFSGILRSDVMCMACGFTSTTYDPCVD 357
Query: 200 ISLDI---------------LNSC----------------SLKEAMQKFFQPEVLDGNNK 228
ISLD+ +SC +L + +F +PE L + K
Sbjct: 358 ISLDLEPQQGGFGKHASMKAHHSCNGETDCMGASQNCGISTLMGCLDRFTRPERLGSDQK 417
Query: 229 YKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI----FGGKIDKAIAFEEVLVLSSFM 284
+ C C+ + KQMSI + P + +KRFE K+D+ + F L ++ ++
Sbjct: 418 FFCQQCQVRQESLKQMSIRKLPLVYCFHIKRFEHSSIRKMSRKVDRYLQFPFSLDMTPYL 477
Query: 285 C--------------------KASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRW 324
AS + E++LF + H+G D+GHY Y++ +W
Sbjct: 478 SSSILRNRFGNRIFPFDGDEPDASNEMSSEFELFAVVTHTG-KLDAGHYVTYLR-LNNQW 535
Query: 325 YCCNDSYVSVSTLQEVLSEKVYILFFIR 352
Y C+D++++ V + + Y++F+++
Sbjct: 536 YKCDDAWITQVNENIVRAAQGYMIFYVQ 563
>gi|383854138|ref|XP_003702579.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Megachile
rotundata]
Length = 542
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 167/361 (46%), Gaps = 49/361 (13%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDS-------ALDAERKR 79
+GLRNLGN+C++N VLQ +++FC L + + D + R +
Sbjct: 187 VGLRNLGNTCFMNVVLQSFN---NISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAK 243
Query: 80 ECPFCILEKRIVRSLSVDLTL---DAPAKIQSCLRIF----AEHFKCGRQEDAHEFLRYV 132
E L +R + + L L + A CL + F+ +Q+DAHEFL Y+
Sbjct: 244 EFMNDALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGYQQQDAHEFLTYM 303
Query: 133 IDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESN 192
+D H L+L L R G G + G S+V +FGG L S V C+ C +S
Sbjct: 304 LDRLHTELLQL--LPRLGHEPLG-------LRGKQSIVTAVFGGTLLSVVHCMNCRTDSK 354
Query: 193 KVDEIMDISLDILNS-----------CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSAR 241
+ D+SLDI + CSL ++ +FF+ E L + Y CDNC +
Sbjct: 355 THEPFQDLSLDIPDRLQRRTKEQEEVCSLTYSLSRFFKVEELADSELYFCDNCMGKQRST 414
Query: 242 KQMSILQSPNILVIQLKRFEGI--FGGKIDKAIAFE-EVLVLSSFMCKASQDPQ------ 292
K+ I + PN+L + +KRF + K+D + F + L +S+F + +
Sbjct: 415 KRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMKSLDMSAFTVRGMTGTKLGASNS 474
Query: 293 PEYKLFGTIVHSGFSPDSGHYYAY-IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 351
Y L IVH G +GHY A+ + D G+W+ NDS V +T V K YILF++
Sbjct: 475 HLYDLAAVIVHHGSGAGTGHYTAFAVHD--GQWFHFNDSSVRPATTDAVAKCKPYILFYV 532
Query: 352 R 352
R
Sbjct: 533 R 533
>gi|195111414|ref|XP_002000274.1| GI10137 [Drosophila mojavensis]
gi|193916868|gb|EDW15735.1| GI10137 [Drosophila mojavensis]
Length = 908
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 166/336 (49%), Gaps = 26/336 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSS-LCKQLTGDSALDAERKRECPFCIL 86
GL+NLGN+CY+NS+LQCL+ TP L FC+ ++ + +C++ + + E +
Sbjct: 575 GLKNLGNTCYMNSILQCLSNTPQLMEFCVSDKYKNYICRRNKTNGQVIEE---------V 625
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
I + A ++ + + + F+ Q+D+HEFL ++D H+ L+
Sbjct: 626 AALIKELWNGQYKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLRVP 685
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI-- 204
R++ S+ E S++ +F G ++S VKC+ C ES + ++SL++
Sbjct: 686 RQREVISASEKAWMEFTKSQESLILHLFYGQIKSTVKCVTCTKESATYECFSNLSLELPA 745
Query: 205 -LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGI 263
N C L + M +F E + G N C NCK A K++ I + P +LVI LKRF
Sbjct: 746 NANLCYLNQCMDMYFSGEKIHGWN---CPNCKTKRDAIKKLDISKLPPVLVIHLKRFYAD 802
Query: 264 ---FGGKIDKAIAFE---EVLVLSSFMCKA-SQDPQPE-YKLFGTIVHSGFSPDSGHYYA 315
G I K + + L + ++ +A S+ P+ Y+L+ H G + + GHY A
Sbjct: 803 PSNPGAYIKKQNYLQFPLDNLDMKPYIARAESRAVTPKTYQLYAVSNHYG-TMEGGHYTA 861
Query: 316 YIKDA-IGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
+ K A GRWY +D VS V+S YILF+
Sbjct: 862 FCKSAHYGRWYKFDDQVVSPLDTSNVVSSAAYILFY 897
>gi|242036661|ref|XP_002465725.1| hypothetical protein SORBIDRAFT_01g044530 [Sorghum bicolor]
gi|241919579|gb|EER92723.1| hypothetical protein SORBIDRAFT_01g044530 [Sorghum bicolor]
Length = 366
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 155/330 (46%), Gaps = 19/330 (5%)
Query: 16 LSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDA 75
L E+ G GL N GN+CY NSVLQ L + P + L+ ++ + TGD
Sbjct: 12 LGEQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFRDQLLEYYANN---KNTGDVE--- 65
Query: 76 ERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDA 135
E C + + + + + AP + L+ E F+ +DAHEFL ++++
Sbjct: 66 ENMLTCLADLFSQ--ISNQKKKTGVIAPKRFIQRLKKQNEIFRSYMHQDAHEFLNFLLNE 123
Query: 136 C-------HNTC---LRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
HN L+ ++ G+ G G ++ V + F G L ++ +CL
Sbjct: 124 LVDILEKEHNAAREPLQNLPFQKNSNGTIDGQPNGSHKELAATWVHKCFQGILTNETRCL 183
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
C +++ + D+SLDI + SL ++ F E L+ +K+ CD C L A+K+M
Sbjct: 184 RCETVTDRDETFFDLSLDIEQNSSLTSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMK 243
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
I + PNILVI LKRF+ I + K +++ V L + + EY LF +VH G
Sbjct: 244 IKKPPNILVIHLKRFKYIEQLQRYKKLSYRVVFPLELKLLNTVDNSDLEYSLFAVVVHVG 303
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVS 335
P+ GHY + +K + W +D V ++
Sbjct: 304 SGPNHGHYISLVK-SHNHWLFFDDENVEMT 332
>gi|73954632|ref|XP_859639.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 2 [Canis
lupus familiaris]
Length = 606
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 163/340 (47%), Gaps = 28/340 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L +AL E F L
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNVHTALMEE------FAKL 322
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL--- 143
+ I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN R+
Sbjct: 323 IQTIWTSSPNDVV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVR 380
Query: 144 -----KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ L G + + S + ++F G L+S + C CG S D
Sbjct: 381 PKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFW 440
Query: 199 DISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
D+SL I +L + M+ F + +VLDG+ K C C+ K+ SI + P ILV
Sbjct: 441 DLSLPIAKRGYPEVTLTDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILV 500
Query: 255 IQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
+ LKRF I K+ + F L L F + + Y L+ HSG + G
Sbjct: 501 LHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMGG 557
Query: 312 HYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HY AY + + G W+ NDS V+ + +V + Y+LF+
Sbjct: 558 HYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 597
>gi|340708658|ref|XP_003392939.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Bombus
terrestris]
Length = 354
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 158/353 (44%), Gaps = 49/353 (13%)
Query: 25 PP----LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
PP GL N GN+CY NSVLQ L + P L+ + A + K
Sbjct: 18 PPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYK------------ARNKRTKET 65
Query: 81 CPFCI--------LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYV 132
C+ +K+ V S+ AP K + LR E F Q+DAHEFL ++
Sbjct: 66 LLTCLADLFYSIATQKKKVGSI-------APKKFIARLRKEKEEFDNYMQQDAHEFLNFL 118
Query: 133 IDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESN 192
I+ + L + + GG G G G + V EIF G L S+ +CL C S+
Sbjct: 119 INHINEIILAERSQSKPTGGKCGAGDAGSP--PEPTWVHEIFQGILTSETRCLNCETVSS 176
Query: 193 KVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNI 252
K ++ D+ +D+ + S+ ++ F E L +NK+KCD+C A+K+M + + P I
Sbjct: 177 KDEDFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDHCSSYQEAQKRMRVKKLPMI 236
Query: 253 LVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQD---PQPEYKLFGTIVHSGFSPD 309
L + LKRF+ + ++ V L + S D P Y L ++H G P+
Sbjct: 237 LALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPN 296
Query: 310 SGHYYAYIKDAIGRWYCCNDSYV---SVSTLQEVL---------SEKVYILFF 350
GHY + +K + G W +D V ST+++ SE YILF+
Sbjct: 297 RGHYISIVK-SHGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSSETGYILFY 348
>gi|417403199|gb|JAA48417.1| Putative ubiquitin carboxyl-terminal hydrolase 2 [Desmodus
rotundus]
Length = 602
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 162/340 (47%), Gaps = 28/340 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L +AL E F L
Sbjct: 265 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNAHTALMEE------FAKL 318
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL--- 143
+ I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN R+
Sbjct: 319 IQTIWTSSLNDVV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNAVNRVTVR 376
Query: 144 -----KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ L G + + S + ++F G L+S + C CG S D
Sbjct: 377 PKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFW 436
Query: 199 DISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
D+SL I +L + M+ F + +VLDG+ K C C+ K+ SI + P ILV
Sbjct: 437 DLSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRTRKRCIKKFSIQRFPKILV 496
Query: 255 IQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
+ LKRF I K+ + F L L F + + Y L+ HSG + G
Sbjct: 497 LHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASETTN--HAVYNLYAVSNHSG-TTVGG 553
Query: 312 HYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HY AY + + G W+ NDS V+ +V + Y+LF+
Sbjct: 554 HYTAYCRSPVTGEWHTFNDSSVTSMFSSQVRTSDAYLLFY 593
>gi|167999895|ref|XP_001752652.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696183|gb|EDQ82523.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 371
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 157/352 (44%), Gaps = 32/352 (9%)
Query: 15 LLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALD 74
+L ++ G GL N GN+CY NSVLQ L FC+ + L + G
Sbjct: 11 VLGDQFPEGERYFGLENFGNTCYCNSVLQALY-------FCVPFREQLL--EYCGQKKPV 61
Query: 75 AERKRECPFCILEKRI-VRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
AE + C+ E + S + AP + +R E F+ +DAHEFL +++
Sbjct: 62 AESEENLLTCLSELFTQINSQKKKTGVIAPKRFVQRVRKQNELFRSYMHQDAHEFLNFLL 121
Query: 134 DACHNTCLRLKKLRRKGGGSS-------GGGGGGETINGGS-----SVVKEIFGGALQSQ 181
+ + ++ + GS G G NG + V +IF G L ++
Sbjct: 122 NELVDILVKEAQAANSNSGSHTSPEKVVGNGATNGLANGNHKEPVVTWVHKIFQGTLTNE 181
Query: 182 VKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSAR 241
+CL C + + + +D+SLDI + S+ ++ F E L+ +K+ CD C L A+
Sbjct: 182 TRCLRCETITARDETFLDLSLDIEQNSSITSCLRNFSSTETLNAEDKFFCDKCCSLQEAQ 241
Query: 242 KQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP---QPEYKLF 298
K+M I P IL + LKRF+ I K +++ V L +C + D + EY LF
Sbjct: 242 KRMKIKSPPRILALHLKRFKYIEQLGRYKKLSYRVVFPLELKLCNTTDDAPGSEAEYSLF 301
Query: 299 GTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
+VH G P+ GHY + +K W +D V E++ E + FF
Sbjct: 302 AVVVHVGSGPNHGHYVSLVKSH-NHWLFFDDENV------EIIDESIVQTFF 346
>gi|168025514|ref|XP_001765279.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683598|gb|EDQ70007.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 373
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 157/351 (44%), Gaps = 32/351 (9%)
Query: 16 LSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDA 75
L ++ G GL N GN+CY NSVLQ L + P + L+H G S A
Sbjct: 14 LGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFRD--QLLEH-------CGQSKPVA 64
Query: 76 ERKRECPFCILEK-RIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVID 134
E + C+ E + S + AP + ++ E F+ +DAHEFL ++++
Sbjct: 65 EAEENLLTCLSELFSQINSQKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFLLN 124
Query: 135 ACHNTCLRLKKLRRK------------GGGSSGGGGGGETINGGSSVVKEIFGGALQSQV 182
+ R K + G GS G G + V +IF G L ++
Sbjct: 125 ELVDILEREAKAAKSNSGCETSPGKVVGNGSVSGLANGTHKEAVVTWVHKIFQGILTNET 184
Query: 183 KCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARK 242
+CL C + + + +D+SLDI + S+ ++ F E L+ +K+ CD C L A+K
Sbjct: 185 RCLRCETITARDETFLDLSLDIEQNSSITSCLRNFSSTETLNAEDKFFCDKCCSLQEAQK 244
Query: 243 QMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP---QPEYKLFG 299
+M I +P IL + LKRF+ I K +++ V L +C + D + EY LF
Sbjct: 245 RMKIKSAPRILALHLKRFKYIEQLGRYKKLSYRVVFPLELKLCNTTDDAPGSEAEYSLFA 304
Query: 300 TIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
+VH G P+ GHY + +K W +D V E++ E + FF
Sbjct: 305 VVVHVGSGPNHGHYVSLVKSH-NHWLFFDDENV------EIIDESIVQTFF 348
>gi|6573163|gb|AAF17574.1| ubiquitin specific processing protease [Rattus norvegicus]
Length = 618
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 164/340 (48%), Gaps = 28/340 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L + +AL E F L
Sbjct: 281 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEE------FAKL 334
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL--- 143
+ I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN R+
Sbjct: 335 IQTIWTSSPNDVV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAAR 392
Query: 144 -----KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ L G + + S + ++F G L+S + C CG S D
Sbjct: 393 PKPSPESLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFW 452
Query: 199 DISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
D+SL I +L + M+ F + +VLDG+ K C C+ K+ S+ + P ILV
Sbjct: 453 DLSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILV 512
Query: 255 IQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
+ LKRF I K+ + F L L F + + Y L+ HSG + G
Sbjct: 513 LHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMGG 569
Query: 312 HYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HY AY + + G W+ NDS V+ + +V + Y+LF+
Sbjct: 570 HYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 609
>gi|18414985|ref|NP_567544.1| ubiquitin carboxyl-terminal hydrolase 20 [Arabidopsis thaliana]
gi|75262803|sp|Q9FPS7.1|UBP20_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; Short=AtUBP20; AltName:
Full=Ubiquitin thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
gi|11993480|gb|AAG42758.1|AF302668_1 ubiquitin-specific protease 20 [Arabidopsis thaliana]
gi|332658563|gb|AEE83963.1| ubiquitin carboxyl-terminal hydrolase 20 [Arabidopsis thaliana]
Length = 695
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 158/339 (46%), Gaps = 38/339 (11%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGNSC+LNSV QC T+T PL L ++ C G+ FC++
Sbjct: 177 GLWNLGNSCFLNSVFQCFTHTVPLIESLLSFRYEVPCH--CGNEF----------FCVIR 224
Query: 88 K---RIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLK 144
I +L + AP L F+ F+ +QEDAHEFL+ ++ C
Sbjct: 225 AIRYHIEAALRPERCPIAPYFFFDNLNYFSPDFQRYQQEDAHEFLQAFLEKLE-IC---- 279
Query: 145 KLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI 204
G T G +++F G L S ++C C S ++ + +SL+I
Sbjct: 280 -------------GSDRTSFRGDITSQDVFSGRLISGLRCCNCDYVSETYEKSVGLSLEI 326
Query: 205 LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--G 262
+ +L A++ F + E LD + CDNC + VS KQ+ + + P + LKRF+ G
Sbjct: 327 EDVDTLGSALESFTRVEKLD--EQLTCDNCNEKVSKEKQLLLDKLPLVATFHLKRFKNNG 384
Query: 263 IFGGKIDKAIAFEEVLVLSSFMCKASQDP-QPEYKLFGTIVHSGFSPDSGHYYAYIKDAI 321
++ KI K + + L +M ++ +Y L+ + H G+S GHY +Y++ A
Sbjct: 385 LYMEKIYKHVKIPLEIDLQPYMRNIQENEVSTKYHLYALVEHFGYSVAYGHYSSYVRSAP 444
Query: 322 GRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSA 360
W+ +DS V+ VLS+ YILF+ R R S+
Sbjct: 445 KIWHHFDDSKVTRIDEDMVLSQDSYILFYAREGTRWFSS 483
>gi|326926643|ref|XP_003209508.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Meleagris
gallopavo]
Length = 1124
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 166/353 (47%), Gaps = 27/353 (7%)
Query: 23 GGPPL-GLRNLGNSCYLNSVLQCLTYTPPLAN-FCLKLQHSSLCK-QLTGDSALDAERKR 79
GP L GLRNLGN+CY+NS+LQCL P LA F L H + + G AE
Sbjct: 778 SGPALTGLRNLGNTCYMNSILQCLCNAPHLAEYFNRNLYHDDINRSNFLGHKGEVAEE-- 835
Query: 80 ECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACH-- 137
F ++ K + + +P + + + F Q+D+ E L +++D H
Sbjct: 836 ---FGVIMKAL---WTGQYKYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHED 889
Query: 138 -NTCLRLKKLRRKGGGSSGGGGGGETI-----NGGSSVVKEIFGGALQSQVKCLACGAES 191
N K+ + + E S++ +F G +S V+CL C +S
Sbjct: 890 LNKADNRKRYKEENNDHLDDLRAAELAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKS 949
Query: 192 NKVDEIMDISLDILNS--CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQS 249
+ M +SL + ++ C+L+E ++ F + E L NN++ C +CK + K++ I +
Sbjct: 950 RTFEAFMYLSLPLASTSKCTLQECLRLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKL 1009
Query: 250 PNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGF 306
P +L++ LKRF +G + K+ ++ F E L LS ++ + + Y LF H G
Sbjct: 1010 PPVLLVHLKRFSYDGRWKQKLQTSVDFPLETLDLSQYVIGPKNNLK-RYNLFSVSNHYG- 1067
Query: 307 SPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPV 358
D GHY AY K+A RW+ +D VS + V S YILF+ QR V
Sbjct: 1068 GLDGGHYTAYCKNASKQRWFKFDDHEVSEISASSVKSSAAYILFYTSYEQRAV 1120
>gi|81883550|sp|Q5U349.1|UBP2_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2; AltName:
Full=Ubiquitin-specific-processing protease testis;
Short=UBP-t
gi|55250569|gb|AAH85719.1| Ubiquitin specific peptidase 2 [Rattus norvegicus]
gi|149041433|gb|EDL95274.1| ubiquitin specific peptidase 2, isoform CRA_a [Rattus norvegicus]
gi|149041435|gb|EDL95276.1| ubiquitin specific peptidase 2, isoform CRA_a [Rattus norvegicus]
Length = 618
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 164/340 (48%), Gaps = 28/340 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L + +AL E F L
Sbjct: 281 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEE------FAKL 334
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL--- 143
+ I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN R+
Sbjct: 335 IQTIWTSSPNDVV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAAR 392
Query: 144 -----KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ L G + + S + ++F G L+S + C CG S D
Sbjct: 393 PKPSPESLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFW 452
Query: 199 DISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
D+SL I +L + M+ F + +VLDG+ K C C+ K+ S+ + P ILV
Sbjct: 453 DLSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILV 512
Query: 255 IQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
+ LKRF I K+ + F L L F + + Y L+ HSG + G
Sbjct: 513 LHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMGG 569
Query: 312 HYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HY AY + + G W+ NDS V+ + +V + Y+LF+
Sbjct: 570 HYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 609
>gi|327289850|ref|XP_003229637.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Anolis
carolinensis]
Length = 479
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 156/346 (45%), Gaps = 38/346 (10%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GL N GN+CY NSVLQ L FC + L ++ RK+E L
Sbjct: 146 FGLVNFGNTCYCNSVLQALY-------FCRPFREKVLAYKV-------QPRKKESLLTCL 191
Query: 87 EKRIVRSLSVD---LTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
+ S++ + + P K S LR E F Q+DAHEFL Y+++ +
Sbjct: 192 SD-LFNSIATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEE 250
Query: 144 KKLRRKGG----GSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMD 199
KK ++ G GS GG E G + V EIF G L ++ +CL C A S+K ++ +D
Sbjct: 251 KKQEKQNGKLQNGSLESSGGDEGEKGDLTWVHEIFQGTLTNETRCLNCEAVSSKDEDFLD 310
Query: 200 ISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
+S+D+ + S+ ++ F E L KY C+ C+ A+K+M + + P IL + LKR
Sbjct: 311 LSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEAQKRMRVKKLPMILALHLKR 370
Query: 260 FEGIFGGKIDKAIAFEEVLVLSSFMCKASQD---PQPEYKLFGTIVHSGFSPDSGHYYAY 316
F+ + +++ V L + S D P Y L +VH G P+ GHY
Sbjct: 371 FKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYITI 430
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVL------------SEKVYILFF 350
+K + G W +D V Q + SE YILF+
Sbjct: 431 VK-SHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFY 475
>gi|357113662|ref|XP_003558620.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like
[Brachypodium distachyon]
Length = 366
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 148/330 (44%), Gaps = 19/330 (5%)
Query: 16 LSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDA 75
L E+ G GL N GN+CY NSVLQ L FC+ + L A D
Sbjct: 12 LGEQFPEGERYFGLENFGNTCYCNSVLQALY-------FCVPFREQLLEYYANNKGAGDG 64
Query: 76 ERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYV--- 132
E L +I + AP + L+ E F+ +DAHEFL ++
Sbjct: 65 EENMLTCLADLFSQISNQKKKTGVI-APKRFIQRLKKQNELFRSYMHQDAHEFLNFLLNE 123
Query: 133 -IDACHNTCLRLKK------LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
+D C K+ L++ G G G ++ V + F G L +Q +CL
Sbjct: 124 LVDILEKECNATKEPPQNSSLQKNSNGPINGQPNGSHRELDTTWVHKCFQGILTNQTRCL 183
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
C +++ + +D+SLDI + S+ ++ F E L+ +K+ CD C L A+K+M
Sbjct: 184 RCETVTDRDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMK 243
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
I + PNILVI LKRF+ I K +++ V L + + EY LF +VH G
Sbjct: 244 IKKPPNILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLINTVDNSDLEYSLFAVLVHVG 303
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVS 335
P+ GHY + +K + W +D V ++
Sbjct: 304 SGPNHGHYISLVK-SHNHWLFFDDENVEMT 332
>gi|301756532|ref|XP_002914115.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Ailuropoda
melanoleuca]
gi|281347816|gb|EFB23400.1| hypothetical protein PANDA_001954 [Ailuropoda melanoleuca]
Length = 606
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 163/340 (47%), Gaps = 28/340 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L +AL E F L
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNVHTALMEE------FAKL 322
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL--- 143
+ I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN R+
Sbjct: 323 IQTIWTSSPNDVV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVR 380
Query: 144 -----KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ L G + + S + ++F G L+S + C CG S D
Sbjct: 381 PKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFW 440
Query: 199 DISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
D+SL I +L + M+ F + +VLDG+ K C C+ K+ SI + P ILV
Sbjct: 441 DLSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILV 500
Query: 255 IQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
+ LKRF I K+ + F L L F + + Y L+ HSG + G
Sbjct: 501 LHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMGG 557
Query: 312 HYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HY AY + + G W+ NDS V+ + +V + Y+LF+
Sbjct: 558 HYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 597
>gi|332019434|gb|EGI59918.1| Ubiquitin carboxyl-terminal hydrolase 46 [Acromyrmex echinatior]
Length = 470
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 158/353 (44%), Gaps = 48/353 (13%)
Query: 25 PP----LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
PP GL N GN+CY NSVLQ L + P L+ + A + K
Sbjct: 133 PPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYK------------ARNKRTKET 180
Query: 81 CPFCI--------LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYV 132
C+ +K+ V S+ AP K + LR E F Q+DAHEFL ++
Sbjct: 181 LLTCLADLFYSIATQKKKVGSI-------APKKFIARLRKEKEEFDNYMQQDAHEFLNFL 233
Query: 133 IDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESN 192
I+ + L + + GG G G + + V EIF G L S+ +CL C S+
Sbjct: 234 INHINEIILAERTQSKPTGGKCGAGDAAGS-PPEPTWVHEIFQGILTSETRCLNCETVSS 292
Query: 193 KVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNI 252
K ++ D+ +D+ + S+ ++ F E L +NK+KCD+C A+K+M + + P I
Sbjct: 293 KDEDFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDHCSSYQEAQKRMRVKKLPMI 352
Query: 253 LVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQD---PQPEYKLFGTIVHSGFSPD 309
L + LKRF+ + ++ V L + S D P Y L ++H G P+
Sbjct: 353 LALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPN 412
Query: 310 SGHYYAYIKDAIGRWYCCNDSYV---SVSTLQEVL---------SEKVYILFF 350
GHY + +K + G W +D V ST+++ SE YILF+
Sbjct: 413 RGHYISIVK-SHGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSSETGYILFY 464
>gi|224142545|ref|XP_002324616.1| predicted protein [Populus trichocarpa]
gi|222866050|gb|EEF03181.1| predicted protein [Populus trichocarpa]
Length = 566
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 168/380 (44%), Gaps = 76/380 (20%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSS-LCKQLTGDSALDAERKRECPFCIL 86
GL NLGN+C++NSVLQ L +TPPL N+ L +H+ C+Q S + R C C +
Sbjct: 194 GLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRYYCQQ--KKSGNENGGLRLCLACDM 251
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
+ S + +PAK A + Q+DAHEF ++D H +++K
Sbjct: 252 DAMFSAVFSGNPVPYSPAKFLYSWWQHAANLASYEQQDAHEFFISMLDGIHE---KVEKD 308
Query: 147 RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI-- 204
R K + +F G L+S V C ACG S K D +DISLD+
Sbjct: 309 RHK--------------THDCCIAHRVFSGILRSDVMCTACGFTSTKYDPCVDISLDLEP 354
Query: 205 ------------LNSC----------------SLKEAMQKFFQPEVLDGNNKYKCDNCKK 236
+SC +L + +F +PE L + K+ C C+
Sbjct: 355 YLGSSAKSMSLKTHSCNGEADCTNSSQNGGISTLIGCLDRFTRPERLGSDQKFFCQQCQV 414
Query: 237 LVSARKQMSILQSPNILVIQLKRFEGI----FGGKIDKAIAFEEVLVLSSFM-------- 284
+ KQMSI + P + +KRFE K+D+ + F L ++ ++
Sbjct: 415 RQESLKQMSIRKLPLVSCFHIKRFEHSSIRKMSRKVDRYLQFPFSLDMAPYLSSSILRSR 474
Query: 285 ------------CKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYV 332
AS + E++LF + H+G DSGHY Y++ + +WY C+DS++
Sbjct: 475 FGNRIFPFDGDEADASNEMSSEFELFAVVTHTG-KLDSGHYVTYLRLS-NQWYKCDDSWI 532
Query: 333 SVSTLQEVLSEKVYILFFIR 352
+ V + + Y++F+++
Sbjct: 533 TQVNENIVRAAQGYMMFYVQ 552
>gi|402912140|ref|XP_003918642.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 249
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 110/198 (55%), Gaps = 30/198 (15%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+CY+N+ LQCLTYTPPLAN+ L +HS LC +R + C C +E
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQLC-----------QRHKCCMLCTME 129
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
I R++ P + + A F G+QEDAHEFL +++DA CL
Sbjct: 130 AHITRAVHC------PGHVIQPSQALAAGFHRGKQEDAHEFLMFIVDAMKKACL------ 177
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
G + + ++++ +IFGG +SQ+KCL C S+ D +DI+LDI +
Sbjct: 178 -------PGHKQVDHDSEDTTLIHQIFGGCWRSQIKCLHCQGVSDTFDPYLDIALDIQAA 230
Query: 208 CSLKEAMQKFFQPEVLDG 225
S+K+A+++ +PE L+G
Sbjct: 231 QSVKQALEQVVKPEELNG 248
>gi|114052498|ref|NP_932760.2| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-69 [Mus
musculus]
gi|114052502|ref|NP_058088.2| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-69 [Mus
musculus]
gi|17028406|gb|AAH17517.1| Ubiquitin specific peptidase 2 [Mus musculus]
gi|34874899|gb|AAQ83302.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
gi|34874937|gb|AAQ83304.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
gi|74218334|dbj|BAE23782.1| unnamed protein product [Mus musculus]
Length = 619
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 164/340 (48%), Gaps = 28/340 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L + +AL E F L
Sbjct: 282 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEE------FAKL 335
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL--- 143
+ I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN R+
Sbjct: 336 IQTIWTSSPNDVV--SPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAAR 393
Query: 144 -----KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ L G + + S + ++F G L+S + C CG S D
Sbjct: 394 PKASPETLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFW 453
Query: 199 DISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
D+SL I +L + M+ F + ++LDG+ K C C+ K+ S+ + P ILV
Sbjct: 454 DLSLPIAKRGYPEVTLMDCMRLFTKEDILDGDEKPTCCRCRARKRCIKKFSVQRFPKILV 513
Query: 255 IQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
+ LKRF I K+ + F L L F + + Y L+ HSG + G
Sbjct: 514 LHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMGG 570
Query: 312 HYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HY AY + + G W+ NDS V+ + +V + Y+LF+
Sbjct: 571 HYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 610
>gi|21483568|gb|AAM52759.1| SD04548p [Drosophila melanogaster]
Length = 896
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 168/335 (50%), Gaps = 24/335 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CY+NS+LQCL+ TP L +C+ ++ + ++ + + + E I E
Sbjct: 564 GLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKNY---ISRSNKTNGQVIEEVAALIKE 620
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ V A ++ + + + F+ Q+D+HEFL ++D H+ L R
Sbjct: 621 LWNGQYKCV-----ASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPR 675
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI--- 204
++ S+ E S++ +F G ++S VKC+AC ES + ++SL++
Sbjct: 676 QREMISASEKAWLEFTKAKESMILHLFYGQMKSTVKCVACHKESATYESFSNLSLELPPN 735
Query: 205 LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF---- 260
N C L + M +F E + G +KC +CK A K++ I + P +LV+ LKRF
Sbjct: 736 SNVCQLNQCMDMYFSGERIHG---WKCPSCKTKRDAIKKLDISKLPPVLVVHLKRFYADP 792
Query: 261 --EGIFGGKIDKAIAFEEVLVLSSFMCKA-SQDPQPE-YKLFGTIVHSGFSPDSGHYYAY 316
G + K + E L ++ ++ +A S+ P+ Y+L+ H G + + GHY A+
Sbjct: 793 SNSGSYMKKQNYLRFPLENLDMNPYIARAESRAVTPKTYQLYAVSNHYG-TMEGGHYTAF 851
Query: 317 IKDA-IGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
K A G+W+ +D VS V+S YILF+
Sbjct: 852 CKSANYGKWFKFDDQVVSALDSSNVVSSAAYILFY 886
>gi|195502725|ref|XP_002098352.1| GE10332 [Drosophila yakuba]
gi|194184453|gb|EDW98064.1| GE10332 [Drosophila yakuba]
Length = 364
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 160/354 (45%), Gaps = 41/354 (11%)
Query: 25 PP----LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
PP GL N GN+CY NSVLQ L + P L+ + + + T S L +
Sbjct: 18 PPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKETLLSCL-----AD 72
Query: 81 CPFCI-LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNT 139
+ I +K+ V S+ AP K + LR E F Q+DAHEFL ++I+ +
Sbjct: 73 LFYSIATQKKKVGSI-------APKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINEI 125
Query: 140 CLRLKKLRRKGGGSSGGGGGGETINGGSS--------VVKEIFGGALQSQVKCLACGAES 191
L + G GG T NG S V EIF G L S+ +CL C S
Sbjct: 126 ILAERNAGPSNGNPKASNQGGSTRNGTGSNGANSEPTWVHEIFQGILTSETRCLNCETVS 185
Query: 192 NKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPN 251
+K + D+ +D+ + S+ ++ F E L +NK+KCDNC A+K+M + + P
Sbjct: 186 SKDENFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPM 245
Query: 252 ILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQD---PQPEYKLFGTIVHSGFSP 308
IL + LKRF+ + ++ V L + S D P Y L ++H G P
Sbjct: 246 ILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGP 305
Query: 309 DSGHYYAYIKDAIGRWYCCNDSYVS---VSTLQEVL---------SEKVYILFF 350
+ GHY + +K + G W +D V ST+++ SE YILF+
Sbjct: 306 NRGHYISIVK-SHGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSSETGYILFY 358
>gi|91084663|ref|XP_967750.1| PREDICTED: similar to ubiquitin specific protease 41 [Tribolium
castaneum]
gi|270008628|gb|EFA05076.1| hypothetical protein TcasGA2_TC015173 [Tribolium castaneum]
Length = 764
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 169/346 (48%), Gaps = 26/346 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+N+GN+C++NSV+QCL+ T L + L+ + + T SA+ + F +
Sbjct: 425 GLKNIGNTCFMNSVIQCLSNTKTLLEYLLQDHYVNDINTTT--SAMKGSLIK--AFAEVI 480
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL- 146
K++ + D ++ + ++S ++ FA F Q+DA EFLRY+++ H R+K+
Sbjct: 481 KKLWSQDASDRVVNT-SSLKSQIQRFAPRFIGYAQQDAQEFLRYLLEGLHEDVNRVKEKP 539
Query: 147 --------RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ + +S + + F G L+S +KC CG S D
Sbjct: 540 KPIITEIDEKLTDSEKSAESWNRYLRMDNSKIVDYFVGQLKSTLKCTHCGHCSVTFDPFW 599
Query: 199 DISLDI---LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVI 255
D+SL I L + + F + E LDG+ K C CK+ K +I + P ILVI
Sbjct: 600 DLSLPIPQRAGQVRLAQCLDSFTREETLDGDEKPTCSKCKERRKCTKSFTIQKFPKILVI 659
Query: 256 QLKRFEGI--FGGKIDKAIAFE-EVLVLSSFMCKASQDPQP-EYKLFGTIVHSGFSPDSG 311
LKRF F GK+ + F E L +S++ A+ + P Y L+ HSG + SG
Sbjct: 660 HLKRFSLAERFRGKLSVTVDFPLEGLDMSNY---AADNITPCRYNLYAISNHSG-TTYSG 715
Query: 312 HYYAYIKDAIGR-WYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
HY AY + + W+ NDS VS + + ++S + Y+LF+ + Q+
Sbjct: 716 HYTAYCRHPYTKAWHEYNDSRVSSISSKAIVSGEAYVLFYEQEGQK 761
>gi|281346341|gb|EFB21925.1| hypothetical protein PANDA_019055 [Ailuropoda melanoleuca]
Length = 511
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 166/391 (42%), Gaps = 76/391 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 144 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 203
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 204 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 252
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 253 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 301
Query: 178 LQSQVKCLACGAESNKVDEIMDISLD-------------------------ILNSCSLKE 212
LQS V C C S +D DISLD + + +L +
Sbjct: 302 LQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGSVVNGESHVAGTTTLTD 361
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L K KC C + KQ+++ + P + LKRFE KI
Sbjct: 362 CLRRFTRPEHLGSGAKIKCSGCHSYQESTKQLTMKKVPIVACFHLKRFEHSAKLRRKITT 421
Query: 271 AIAFEEVLVLSSFMCKA--------------SQDPQPEYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + S + +Y LF + H G + +SGHY ++
Sbjct: 422 YVSFPLELDMTPFMASSKESRMNGQYQQLTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 480
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 347
I+ +W+ C+D+ ++ +++++VL + Y+
Sbjct: 481 IRQHKDQWFKCDDAIITKASIEDVLDSEGYV 511
>gi|194897797|ref|XP_001978724.1| GG19743 [Drosophila erecta]
gi|190650373|gb|EDV47651.1| GG19743 [Drosophila erecta]
Length = 1414
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 157/352 (44%), Gaps = 55/352 (15%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRN+GN+C++NSV+QCL++T L F L+ H S T D + E
Sbjct: 1090 GLRNIGNTCFMNSVIQCLSHTQELTRF-LRSHHGSRS-SATKDQQILHE---------FA 1138
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
K I + ++ P +++ + Q+DA EFLR+ +D+ H+
Sbjct: 1139 KLIQEMWTSNVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHSAL------- 1191
Query: 148 RKGGGSSGGGGGGETIN--------------------GGSSVVKEIFGGALQSQVKCLAC 187
G GET+N +S+V+++F G L+S +KC C
Sbjct: 1192 -------NSGVKGETLNIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQLKSTLKCTTC 1244
Query: 188 GAESNKVDEIMDISLDILNS--CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
G S D D+S+ + +S C L+ + F + EVLDG+ C CK K +
Sbjct: 1245 GNTSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEVLDGDEMPTCAKCKTRRKCTKSFT 1304
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAF---EEVLVLSSFMCKASQDPQPEYKLFGTIV 302
I + P LVI LKRF K+ + F + L + S+ A+ + Y L+
Sbjct: 1305 IQRFPKYLVIHLKRFSETRWSKLSNIVEFPTSDSELNMGSY--GANSNSNVHYSLYAISN 1362
Query: 303 HSGFSPDSGHYYAYIKDAIGR-WYCCNDSYVSVS-TLQEVLSEKVYILFFIR 352
H G S GHY A K + R W+ ND+ VS + + ++S YILF+ R
Sbjct: 1363 HMG-STAGGHYVALCKHPVSRKWHEFNDNIVSEALSENHLVSSSAYILFYER 1413
>gi|428167496|gb|EKX36454.1| hypothetical protein GUITHDRAFT_165733 [Guillardia theta CCMP2712]
Length = 1003
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 130/258 (50%), Gaps = 39/258 (15%)
Query: 119 CGRQEDAHEFLRYVIDACHN----------TCLR--LKKLRRKGGGSSGGGGGGETINGG 166
G QEDAHE+L +++ H TC + L K R
Sbjct: 11 VGEQEDAHEYLVNLLEKLHRHHADELFPPLTCHQEWLSKNRHLEL--------------- 55
Query: 167 SSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS-----CSLKEAMQKFFQPE 221
++ + +IFGG + S+V+C +CG S D I D++L+I N+ SL++ + ++ E
Sbjct: 56 TTCIHQIFGGKICSEVRCRSCGGSSKTFDLITDLALEIQNANTLEGASLEDCLLQYTIEE 115
Query: 222 VLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLV 279
L +N Y C+ CK+ A KQ+ I PNILV+QLKRF G+ GGKI ++I++ VL
Sbjct: 116 QLGMSNAYLCEKCKRRSQATKQLRIHTLPNILVVQLKRFSFWGLHGGKISRSISYPAVLD 175
Query: 280 LSSFMCKASQDPQPE-YKLFGTIVHSGFSPDSGHYYAYIKDAI----GRWYCCNDSYVSV 334
+ ++ + Y L+G +VH G S GHY +Y+K A G WY +DS+
Sbjct: 176 MRPYLTSPERHFNNSIYDLYGVLVHEGSSLQYGHYLSYVKHACKHKEGSWYQMDDSHTMK 235
Query: 335 STLQEVLSEKVYILFFIR 352
L L + YILF+ R
Sbjct: 236 VDLDTALRQNAYILFYAR 253
>gi|327288428|ref|XP_003228928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Anolis
carolinensis]
Length = 1066
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 164/350 (46%), Gaps = 27/350 (7%)
Query: 24 GPPL-GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQ--LTGDSALDAERKRE 80
GP L GLRNLGN+CY+NS+LQCL P LA++ + + + G AE
Sbjct: 721 GPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNYYQVDINRSNFLGHKGEVAEE--- 777
Query: 81 CPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACH--- 137
F I+ K + + +P + + + F Q+D+ E L +++D H
Sbjct: 778 --FGIIMKAL---WAGQYRYISPKDFKMTIGKINDQFAGYSQQDSQELLLFLMDDLHEDL 832
Query: 138 NTCLRLKKLRRKGGGSSGGGGGGETI-----NGGSSVVKEIFGGALQSQVKCLACGAESN 192
N K+ + + + S++ +F G +S V+CL C +S
Sbjct: 833 NKADNRKRYKEENNDDLDDPKAADLAWHKHKQLNESIIVALFQGQFKSTVQCLTCHKKSR 892
Query: 193 KVDEIMDISLDILNS--CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSP 250
+ M +SL + ++ C+L+E + F + E L NN++ C +CK + K++ I + P
Sbjct: 893 TFEAFMYLSLPLASTSKCTLQECFRLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLP 952
Query: 251 NILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFS 307
+L++ LKRF +G + K+ ++ F E L +S ++ + + Y LF H G
Sbjct: 953 PVLLVHLKRFSYDGRWKQKLQTSVDFPLESLDVSQYVIGPKSNSK-RYNLFAVSNHYG-G 1010
Query: 308 PDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
D GHY AY K+A RWY +D VS + V S YILF+ QR
Sbjct: 1011 LDGGHYTAYCKNATKQRWYKFDDHEVSEISTSSVKSSAAYILFYTSLEQR 1060
>gi|410972085|ref|XP_003992491.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Felis catus]
Length = 606
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 164/340 (48%), Gaps = 28/340 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L + +AL E F L
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHGSSVHTALMEE------FAKL 322
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL--- 143
+ I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN R+
Sbjct: 323 IQTIWTSSPNDVV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVR 380
Query: 144 -----KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ L G + + S + ++F G L+S + C CG S D
Sbjct: 381 PKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFW 440
Query: 199 DISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
D+SL I +L + M+ F + +VLDG+ K C C+ K+ SI + P ILV
Sbjct: 441 DLSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILV 500
Query: 255 IQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
+ LKRF I K+ + F L L F + + Y L+ HSG + G
Sbjct: 501 LHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMGG 557
Query: 312 HYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HY AY + + G W+ NDS V+ + +V + Y+LF+
Sbjct: 558 HYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 597
>gi|388454150|ref|NP_001252825.1| ubiquitin carboxyl-terminal hydrolase 2 [Macaca mulatta]
gi|355567137|gb|EHH23516.1| hypothetical protein EGK_06991 [Macaca mulatta]
gi|355752713|gb|EHH56833.1| hypothetical protein EGM_06315 [Macaca fascicularis]
gi|380789853|gb|AFE66802.1| ubiquitin carboxyl-terminal hydrolase 2 isoform a [Macaca mulatta]
Length = 605
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 164/341 (48%), Gaps = 30/341 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L +AL E F L
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHSSNAHTALMEE------FAKL 321
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
+ I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN R+ L
Sbjct: 322 IQTIWTSSPNDVV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRV-TL 378
Query: 147 RRKGGGSS---------GGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEI 197
R K + G + + S + ++F G L+S + C CG S D
Sbjct: 379 RPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPF 438
Query: 198 MDISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
D+SL I +L + M+ F + +VLDG+ K C C+ K+ SI + P IL
Sbjct: 439 WDLSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKIL 498
Query: 254 VIQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS 310
V+ LKRF I K+ + F L L F + + Y L+ HSG +
Sbjct: 499 VLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMG 555
Query: 311 GHYYAYIKD-AIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
GHY AY + G W+ NDS V+ + +V + Y+LF+
Sbjct: 556 GHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 596
>gi|114152901|sp|O88623.2|UBP2_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|34874927|gb|AAQ83303.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
Length = 613
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 164/340 (48%), Gaps = 28/340 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L + +AL E F L
Sbjct: 276 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEE------FAKL 329
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL--- 143
+ I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN R+
Sbjct: 330 IQTIWTSSPNDVV--SPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAAR 387
Query: 144 -----KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ L G + + S + ++F G L+S + C CG S D
Sbjct: 388 PKASPETLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFW 447
Query: 199 DISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
D+SL I +L + M+ F + ++LDG+ K C C+ K+ S+ + P ILV
Sbjct: 448 DLSLPIAKRGYPEVTLMDCMRLFTKEDILDGDEKPTCCRCRARKRCIKKFSVQRFPKILV 507
Query: 255 IQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
+ LKRF I K+ + F L L F + + Y L+ HSG + G
Sbjct: 508 LHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMGG 564
Query: 312 HYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HY AY + + G W+ NDS V+ + +V + Y+LF+
Sbjct: 565 HYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 604
>gi|402895527|ref|XP_003910877.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Papio anubis]
Length = 605
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 164/341 (48%), Gaps = 30/341 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L +AL E F L
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHSSNAHTALMEE------FAKL 321
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
+ I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN R+ L
Sbjct: 322 IQTIWTSSPNDVV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRV-TL 378
Query: 147 RRKGGGSS---------GGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEI 197
R K + G + + S + ++F G L+S + C CG S D
Sbjct: 379 RPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPF 438
Query: 198 MDISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
D+SL I +L + M+ F + +VLDG+ K C C+ K+ SI + P IL
Sbjct: 439 WDLSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKIL 498
Query: 254 VIQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS 310
V+ LKRF I K+ + F L L F + + Y L+ HSG +
Sbjct: 499 VLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMG 555
Query: 311 GHYYAYIKD-AIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
GHY AY + G W+ NDS V+ + +V + Y+LF+
Sbjct: 556 GHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 596
>gi|168025346|ref|XP_001765195.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683514|gb|EDQ69923.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 371
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 154/344 (44%), Gaps = 32/344 (9%)
Query: 23 GGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECP 82
G GL N GN+CY NSVLQ L + P + L+H G S AE +
Sbjct: 19 GERYFGLENFGNTCYCNSVLQALYFCVPFRD--QLLEH-------CGQSKPVAEAEENLL 69
Query: 83 FCILEK-RIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL 141
C+ E + S + AP + ++ E F+ +DAHEFL ++++ +
Sbjct: 70 TCLSELFSQINSQKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFLLNELVDILE 129
Query: 142 RLKKLRRK------------GGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGA 189
R K + G GS G G + V +IF G L ++ +CL C
Sbjct: 130 REAKAAKSNSGCETSPGKVVGNGSVSGLANGTHKEAVVTWVHKIFQGILTNETRCLRCET 189
Query: 190 ESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQS 249
+ + + +D+SLDI + S+ ++ F E L+ +K+ CD C L A+K+M I +
Sbjct: 190 ITARDETFLDLSLDIEQNSSITSCLRNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKSA 249
Query: 250 PNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP---QPEYKLFGTIVHSGF 306
P IL + LKRF+ I K +++ V L +C + D + EY LF +VH G
Sbjct: 250 PRILALHLKRFKYIEQLGRYKKLSYRVVFPLELKLCNTTDDAPGSEAEYSLFAVVVHVGS 309
Query: 307 SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
P+ GHY + +K W +D V E++ E + FF
Sbjct: 310 GPNHGHYVSLVKSH-NHWLFFDDENV------EIIDESIVQTFF 346
>gi|10720326|sp|O57429.1|UBP2_CHICK RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|2736064|gb|AAC13729.1| ubiquitin specific protease 41 [Gallus gallus]
Length = 357
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 160/339 (47%), Gaps = 26/339 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRNLGN+C++NS+LQCL+ T L ++CL+ Q+ + L +S + E F L
Sbjct: 20 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQY---LRDLNNNSRMRTALMSE--FAKLI 74
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ + S D +P++ ++ ++ +A F Q+DA EFLR+++D H R+
Sbjct: 75 QLLWTSSPNDSV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHGEVNRVLVRP 132
Query: 148 RKGGGSSGGGGGGETING--------GSSVVKEIFGGALQSQVKCLACGAESNKVDEIMD 199
R + E S V ++F G L+S + C CG S D D
Sbjct: 133 RANADTLDHLPDDEKSRQMWRRYQEREDSRVSDLFVGQLKSSLTCSECGYCSTAFDPFWD 192
Query: 200 ISLDI----LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVI 255
+SL I +L + ++ F + +VLDG+ K C CK K+ SI + P ILV+
Sbjct: 193 LSLPIPKKGYGEVTLMDCLRLFTKEDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVL 252
Query: 256 QLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGH 312
LKRF I K+ + F + L L F ++ Y L+ HSG + GH
Sbjct: 253 HLKRFSEARIRASKLTTFVNFPLKDLDLREFASQSCN--HAVYNLYAVSNHSG-TTMGGH 309
Query: 313 YYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
Y AY K I W+ NDS V+ + V S Y+LF+
Sbjct: 310 YTAYCKSPISSEWHSFNDSRVTPMSSSHVRSSDAYLLFY 348
>gi|291225440|ref|XP_002732713.1| PREDICTED: ubiquitin specific protease 8-like [Saccoglossus
kowalevskii]
Length = 1150
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 171/355 (48%), Gaps = 32/355 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+C++NS++Q L + PLA + ++ S + ++ L K F ++
Sbjct: 810 GLKNLGNTCFMNSIIQSLANSTPLATYFIE---GSYKYHINRENKLGRGGKVAEEFAVVI 866
Query: 88 KRI----VRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL 143
I RS+S P + + F F Q+D+ EFL +++D H R+
Sbjct: 867 NAIWSGHYRSIS-------PRDFKLTVSKFVPQFAGYEQQDSQEFLLFLLDGLHEDLNRV 919
Query: 144 KKLR----RKGGGSSGGGGGGETING----GSSVVKEIFGGALQSQVKCLACGAESNKVD 195
K + + + N S++ E+F G +S ++CL C +S D
Sbjct: 920 KHRKYIEEKDNTHLTDDQAAQLAWNNHKRLNESIMVELFQGQFKSTLQCLFCQKKSVTYD 979
Query: 196 EIMDISLDIL--NSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
M +SL +L N CSL + ++ F + E + G +K+ C CK A K++ I + P+IL
Sbjct: 980 AFMYLSLPLLSNNRCSLYDCVKNFTKLEKVGGADKWFCPKCKVHREANKRIEIWKLPHIL 1039
Query: 254 VIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS 310
+I LKRF EG++ K+ + F L +SS + + + Y L+ H G + D
Sbjct: 1040 LIHLKRFSYEGVWRHKLQTDVDFPINNLDMSSHVIGPKK--RSSYNLYAVSNHYG-TMDG 1096
Query: 311 GHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTF 364
GHY A+ K+AI +WY +D+ V + V S YILF+ + + P A TF
Sbjct: 1097 GHYTAFCKNAIRQKWYKFDDTEVYEMPTRNVKSSAAYILFYT-SIELPPPAMHTF 1150
>gi|392578433|gb|EIW71561.1| hypothetical protein TREMEDRAFT_22545, partial [Tremella
mesenterica DSM 1558]
Length = 329
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 154/324 (47%), Gaps = 44/324 (13%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQH-------------SSLCKQLTGDSALD 74
GL N GN+CY NSVLQ L PL F SSL LT +++
Sbjct: 2 GLENFGNTCYCNSVLQALYACQPLRQFIEAYPDVPAPISPLGPPPGSSLFAPLTPSASVG 61
Query: 75 AERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVID 134
+ P + +VR P + ++ E F+ Q+DAHEFL ++++
Sbjct: 62 S------PVTSKSRGVVR----------PDDLLKTVKKENEMFRGMSQQDAHEFLGWLLN 105
Query: 135 ACHNTCLRL-KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNK 193
R+ K LR +G + G G+T V +F G L ++ +CL+C S++
Sbjct: 106 HVAEDVERVDKHLRAEGRAPTMAKGHGKTF------VHNLFEGVLTNETRCLSCEMTSSR 159
Query: 194 VDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
+ +D+S+DI S+ +++F E+L NK+ CD+C L A K+M I + PN+L
Sbjct: 160 DESFLDLSIDIEQHTSVTACLRQFSASEMLCQKNKFYCDSCCGLQEAEKRMKIKRLPNVL 219
Query: 254 VIQLKRFE-----GIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSP 308
+ LKRF+ G + K+ + F L L + +++P Y+LF +VH G P
Sbjct: 220 ALHLKRFKYQESLGRY-TKLFYRVPFPLELRLPN-TSDDAENPDRLYELFAVVVHIGNGP 277
Query: 309 DSGHYYAYIKDAIGRWYCCNDSYV 332
GHY A ++ A GRW C+D V
Sbjct: 278 HHGHYVAMVRSA-GRWVMCDDENV 300
>gi|195058982|ref|XP_001995537.1| GH17708 [Drosophila grimshawi]
gi|193896323|gb|EDV95189.1| GH17708 [Drosophila grimshawi]
Length = 847
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 160/353 (45%), Gaps = 54/353 (15%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRN+GN+C++NSV+QCL++T L F L+ ++S + D + E
Sbjct: 522 GLRNIGNTCFMNSVIQCLSHTTELTRF-LRGHNASPRSATSKDQQILHE---------FA 571
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
K I + ++ P +++ + + Q+DA EFLR+ +D+ H+
Sbjct: 572 KLIQEMWTTNVHSVTPMELKRAFSLKHRMYNDYNQQDAQEFLRFFLDSLHSAL------- 624
Query: 148 RKGGGSSGGGGGGETIN--------------------GGSSVVKEIFGGALQSQVKCLAC 187
G GET+N +S+++++F G L+S +KC C
Sbjct: 625 -------NTGVKGETLNIDDNLSDNKKADLTWEWYARHENSLIRDLFVGQLKSTLKCTTC 677
Query: 188 GAESNKVDEIMDISLDILNS--CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
G S D D+S+ + +S C L+ + F + EVLDG+ C CK K +
Sbjct: 678 GNTSVTFDPFWDLSVPLPSSSRCKLESCLDLFIREEVLDGDEMPTCSKCKTRRKCTKSFT 737
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAF---EEVLVLSSFMCKASQDPQPEYKLFGTIV 302
I + P LVI LKRF K+ + F + L ++S+ A+ + Y L+
Sbjct: 738 IQRFPKYLVIHLKRFSETRWSKLSNIVEFPTADRELNMASYGANANSNVH--YSLYAISN 795
Query: 303 HSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVL-SEKVYILFFIRA 353
H G S GHY A K + +W+ ND+ VS S + L S YILF+ RA
Sbjct: 796 HMG-STAGGHYVAICKHPVSHKWHEFNDNSVSDSIPENCLVSSSAYILFYERA 847
>gi|348574067|ref|XP_003472812.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Cavia porcellus]
Length = 611
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 165/339 (48%), Gaps = 26/339 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRNLGN+C++NS+LQCL+ T L ++CL+ + + L+ S++ E F L
Sbjct: 274 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLY---MRDLSHTSSVHTGLMEE--FAKLI 328
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL---- 143
+ I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN R+
Sbjct: 329 QTIWTSCPNDVV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAVRP 386
Query: 144 ----KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMD 199
+ L G + + S + ++F G L+S + C CG S D D
Sbjct: 387 KSSHENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWD 446
Query: 200 ISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVI 255
+SL I +L + M+ F + ++LDG+ K C C+ K+ SI + P ILV+
Sbjct: 447 LSLPIAKRGYPEVTLMDCMRLFTKEDILDGDEKPTCCRCRARKRCIKKFSIQRFPKILVL 506
Query: 256 QLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGH 312
LKRF I K+ + F L L F + + Y L+ HSG + GH
Sbjct: 507 HLKRFSESRIRTSKLSTFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMGGH 563
Query: 313 YYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
Y AY + + G W+ NDS V+ + +V + Y+LF+
Sbjct: 564 YTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 602
>gi|403262562|ref|XP_003923645.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Saimiri
boliviensis boliviensis]
Length = 606
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 164/345 (47%), Gaps = 38/345 (11%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLK------LQHSSLCKQLTGDSALDAERKREC 81
GLRNLGN+C++NS+LQCL+ T L ++CL+ L HSS +AL E
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYVRDLHHSS-----NAHTALVEE----- 318
Query: 82 PFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL 141
F L + I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN
Sbjct: 319 -FAKLIQTIWTSSPNDVV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVN 375
Query: 142 RL--------KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNK 193
R+ + L G + + S + ++F G L+S + C CG S
Sbjct: 376 RVAPRPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTV 435
Query: 194 VDEIMDISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQS 249
D D+SL I +L + M+ F + +VLDG+ K C C+ K+ SI +
Sbjct: 436 FDPFWDLSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRF 495
Query: 250 PNILVIQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGF 306
P ILV+ LKRF I K+ + F L L F + + Y L+ HSG
Sbjct: 496 PKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG- 552
Query: 307 SPDSGHYYAYIKD-AIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
+ GHY AY + G W+ NDS V+ + +V + Y+LF+
Sbjct: 553 TTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 597
>gi|449471131|ref|XP_002197001.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Taeniopygia
guttata]
Length = 1087
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 164/353 (46%), Gaps = 27/353 (7%)
Query: 23 GGPPL-GLRNLGNSCYLNSVLQCLTYTPPLAN-FCLKLQHSSLCK-QLTGDSALDAERKR 79
GP L GLRNLGN+CY+NS+LQCL P LA F L + + + G AE
Sbjct: 741 SGPALTGLRNLGNTCYMNSILQCLCNAPHLAEYFNRNLYQADINRSNFLGHKGEVAEE-- 798
Query: 80 ECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACH-- 137
F ++ K + + +P + + + F Q+D+ E L +++D H
Sbjct: 799 ---FGVIMKAL---WAGQYKYISPKDFKITIGKINDQFSGYSQQDSQELLLFLMDGLHED 852
Query: 138 -NTCLRLKKLRRKGGGSSGGGGGGETI-----NGGSSVVKEIFGGALQSQVKCLACGAES 191
N K+ + + E S++ +F G +S V+CL C S
Sbjct: 853 LNKADNRKRYKEENNDHLDDSSAAEIAWHKHKQLNESIIVALFQGQFKSTVQCLTCHKRS 912
Query: 192 NKVDEIMDISLDILNS--CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQS 249
+ M +SL + +S C+L+E ++ F + E L NN++ C +CK + K++ I +
Sbjct: 913 RTFEAFMYLSLPLASSSKCTLQECLRLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKL 972
Query: 250 PNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGF 306
P +L++ LKRF +G + K+ ++ F E L LS ++ + Y LF H G
Sbjct: 973 PPVLLVHLKRFSYDGRWKQKLQTSVDFPLETLDLSQYVI-GPKTSLKRYNLFSVSNHYG- 1030
Query: 307 SPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPV 358
D GHY AY K+A RW+ +D VS + V S YILF+ QR V
Sbjct: 1031 GLDGGHYTAYCKNASKQRWFKFDDHEVSEISASSVKSSAAYILFYTSYEQRAV 1083
>gi|159488883|ref|XP_001702430.1| predicted protein [Chlamydomonas reinhardtii]
gi|158271098|gb|EDO96925.1| predicted protein [Chlamydomonas reinhardtii]
Length = 347
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 160/352 (45%), Gaps = 35/352 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL NLGN+C++NS LQCL + PL L + K L + L + + F +L
Sbjct: 4 GLSNLGNTCFMNSSLQCLAHAVPLMQAFLG---GTYIKDLNRTNPLGMKGELAEAFGMLL 60
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+++ R ++ +P ++ + FA F Q D+ EFL +++D H R+K
Sbjct: 61 QQLWRG---GVSSVSPRSFKAKIGRFAPQFSGYAQHDSQEFLAFLLDGLHEDTNRIKTKP 117
Query: 148 RKGGGSSGGGGGGETINGG--------SSVVKEIFGGALQSQVKCLACGAESNKVDEIMD 199
G E +S+V + F G L+S + C C S K D M
Sbjct: 118 YFETKDEPGRPDEELATEAWSQYRARNNSLVVDHFQGLLKSGLDCPKCAYHSVKFDPFMY 177
Query: 200 ISLDILNS----CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVI 255
+SL + S +L++ M+ F QPE LD ++ + C CK+ V A K++ + P +LV+
Sbjct: 178 LSLPLPESRRRPVALEDCMRVFLQPERLDESDAWYCPRCKEHVCADKKLDLWSLPEVLVV 237
Query: 256 QLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGH 312
LKRF K+D + F L L S++ +A Q P Y F H G S GH
Sbjct: 238 HLKRFSYTRYSRNKLDTRVDFPLHGLDLGSYVLRA-QGVAPLYDCFAVSNHFG-SMGGGH 295
Query: 313 YYAYIK------------DAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
Y AY K D WYC +DS+VS + V S Y+LF+ R
Sbjct: 296 YTAYAKLPGPPPGTAAGADGAEAWYCFDDSHVSAVEPEAVRSSAAYVLFYRR 347
>gi|195446147|ref|XP_002070649.1| GK12180 [Drosophila willistoni]
gi|194166734|gb|EDW81635.1| GK12180 [Drosophila willistoni]
Length = 925
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 170/346 (49%), Gaps = 24/346 (6%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CY+NS+LQCL++TP L +C+ ++ + ++ + + + E I E
Sbjct: 592 GLKNLGNTCYMNSILQCLSHTPQLTEYCITDKYKNY---ISRSNKTNGQVIEEVAALIKE 648
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ V A ++ + + + F+ Q+D+HEFL ++D H+ L +
Sbjct: 649 LWNGQYKCV-----ASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLNVKQ 703
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNS 207
++ ++ E S++ +F G ++S VKC+ C ES + ++SL++ +
Sbjct: 704 KRETITASEKAWMEFTKAKESLILHLFYGQMKSTVKCVTCNRESATYECFSNLSLELPEN 763
Query: 208 ---CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--- 261
C L + M +F E + G N C NCK A K++ I + P +LV+ LKRF
Sbjct: 764 KELCYLNQCMDMYFSGERIHGWN---CPNCKTKREAIKKLDISKLPPVLVVHLKRFHADP 820
Query: 262 ---GIFGGKIDKAIAFEEVLVLSSFMCKA-SQDPQPE-YKLFGTIVHSGFSPDSGHYYAY 316
G + K + E L ++ ++ +A S+ P+ Y+L+ H G + + GHY A+
Sbjct: 821 IQSGAYTKKQNYLRFPLENLEMTPYIARAESRTVTPKIYQLYAVSNHYG-TMEGGHYTAF 879
Query: 317 IKDA-IGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVSAN 361
K A RWY +D VS V+S YILF+ VS++
Sbjct: 880 CKSANYKRWYKFDDQIVSTLDTSSVVSSAAYILFYTWLPHTQVSSH 925
>gi|223029565|gb|ACM78504.1| MIP03335p [Drosophila melanogaster]
Length = 367
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 170/347 (48%), Gaps = 34/347 (9%)
Query: 21 KRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
+RG GL+NLGN+CY+NS+LQCL+ TP L +C+ ++ + ++ + + + E
Sbjct: 28 RRGRGLTGLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKNY---ISRSNKTNGQVIEE 84
Query: 81 CPFCILE-----KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDA 135
I E + V S + + KI F+ Q+D+HEFL ++D
Sbjct: 85 VAALIKELWNGQYKCVASRDLRYVVGQYQKI----------FRGVDQQDSHEFLTILMDW 134
Query: 136 CHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVD 195
H+ L R++ S+ E S++ +F G ++S VKC+AC ES +
Sbjct: 135 LHSDLQTLHVPRQREMISASEKAWLEFTKAKESMILHLFYGQMKSTVKCVACHKESATYE 194
Query: 196 EIMDISLDI---LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNI 252
++SL++ N C L + M +F E + G N C +CK A K++ I + P +
Sbjct: 195 SFSNLSLELPPNSNVCQLNQCMDMYFSGERIHGWN---CPSCKTKRDAIKKLDISKLPPV 251
Query: 253 LVIQLKRF------EGIFGGKIDKAIAFEEVLVLSSFMCKA-SQDPQPE-YKLFGTIVHS 304
LV+ LKRF G++ K + E L ++ ++ +A S+ P+ Y+L+ H
Sbjct: 252 LVVHLKRFYADPSNSGLYMKKQNYLRFPLENLDMNPYIARAESRAVTPKTYQLYAVSNHY 311
Query: 305 GFSPDSGHYYAYIKDA-IGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
G + + GHY A+ K A G+W+ +D VS V+S YILF+
Sbjct: 312 G-TMEGGHYTAFCKSANYGKWFKFDDQVVSALDSSNVVSSAAYILFY 357
>gi|426233324|ref|XP_004010667.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Ovis
aries]
Length = 1009
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 166/345 (48%), Gaps = 27/345 (7%)
Query: 23 GGPPL-GLRNLGNSCYLNSVLQCLTYTPPLANFCLK--LQHSSLCKQLTGDSALDAERKR 79
GP L GLRNLGN+CY+NS+LQCL TP LA++ + Q L G AE
Sbjct: 663 SGPALTGLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRSNLLGHKGEVAEE-- 720
Query: 80 ECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACH-- 137
F I+ K + + +P + + + F Q+D+ E L +++D H
Sbjct: 721 ---FGIIMKAL---WTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHED 774
Query: 138 -NTCLRLKKLRRKGGGSSGGGGGGETI-----NGGSSVVKEIFGGALQSQVKCLACGAES 191
N K+ + + E S++ +F G +S V+CL C +S
Sbjct: 775 LNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKS 834
Query: 192 NKVDEIMDISLDILNS--CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQS 249
+ M +SL + ++ C+L++ ++ F + E L NN++ C +C+ + K++ I +
Sbjct: 835 RTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKL 894
Query: 250 PNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGF 306
P +L++ LKRF +G + K+ ++ F E L LS ++ + + +Y LF H G
Sbjct: 895 PPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLK-KYNLFSVSNHYG- 952
Query: 307 SPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
D GHY AY K+A RW+ +D VS ++ V S YILF+
Sbjct: 953 GLDGGHYTAYCKNAARQRWFKFDDHEVSDISISSVKSSAAYILFY 997
>gi|345305034|ref|XP_001506997.2| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Ornithorhynchus anatinus]
Length = 368
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 162/335 (48%), Gaps = 33/335 (9%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRNLGN+CY+N+VLQCL PL + L ++ + + G+ A
Sbjct: 43 GLRNLGNTCYMNAVLQCLASIAPLVEYFLSGKYVTALHRDRGEVA--------------- 87
Query: 88 KRIVRSLSVDLTL-DAPAKIQSCLRIFA--EHFKCGR--QEDAHEFLRYVIDACHNTCLR 142
+ L D+ L DA R+ H G+ Q+DA EFL +V++A H
Sbjct: 88 -TALAYLLTDMWLGDADCVAPEVFRLAVGDRHPAFGKKSQQDAQEFLIFVLNALHEA--- 143
Query: 143 LKK-LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDIS 201
LKK RRK + GG+ G SS+V ++F G L V CL C + S K + +S
Sbjct: 144 LKKPRRRKPSEKAASRRGGKAAAGESSIVSQLFEGQLSYDVVCLKCDSCSYKGETFTVLS 203
Query: 202 LDILN--SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKR 259
L I + CSL+E +++FFQ + L NN+ C C A + +++++PN+++ LKR
Sbjct: 204 LPIPSHYQCSLQECLERFFQQDTLRWNNQIYCSYCDAKQDAAVRATVVKAPNVVIFHLKR 263
Query: 260 FE--GIFGGKIDKAIAFEEV-LVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAY 316
FE G K+ I + L LS ++ + P+Y L+ + H G D GHY A
Sbjct: 264 FECYGKMKRKLRTNIRYPLANLDLSPYIYPPCRK-HPKYNLWAVVNHFG-DLDGGHYTAL 321
Query: 317 IKDAIGR-WYCCNDSYVSVSTLQEVLSEKVYILFF 350
K+ + + W+ +D+ V V + Y+L +
Sbjct: 322 CKNTVTQSWFSFDDTRVCEVPEAAVQTAAAYLLCY 356
>gi|115497674|ref|NP_001069594.1| ubiquitin carboxyl-terminal hydrolase 8 [Bos taurus]
gi|113911783|gb|AAI22572.1| Ubiquitin specific peptidase 8 [Bos taurus]
gi|296483106|tpg|DAA25221.1| TPA: ubiquitin specific peptidase 8 [Bos taurus]
Length = 1085
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 166/345 (48%), Gaps = 27/345 (7%)
Query: 23 GGPPL-GLRNLGNSCYLNSVLQCLTYTPPLANFCLK--LQHSSLCKQLTGDSALDAERKR 79
GP L GLRNLGN+CY+NS+LQCL TP LA++ + Q L G AE
Sbjct: 739 SGPALTGLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRSNLLGHKGEVAEE-- 796
Query: 80 ECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACH-- 137
F I+ K + + +P + + + F Q+D+ E L +++D H
Sbjct: 797 ---FGIIMKAL---WTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHED 850
Query: 138 -NTCLRLKKLRRKGGGSSGGGGGGETI-----NGGSSVVKEIFGGALQSQVKCLACGAES 191
N K+ + + E S++ +F G +S V+CL C +S
Sbjct: 851 LNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKS 910
Query: 192 NKVDEIMDISLDILNS--CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQS 249
+ M +SL + ++ C+L++ ++ F + E L NN++ C +C+ + K++ I +
Sbjct: 911 RTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKL 970
Query: 250 PNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGF 306
P +L++ LKRF +G + K+ ++ F E L LS ++ + + +Y LF H G
Sbjct: 971 PPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLK-KYNLFSVSNHYG- 1028
Query: 307 SPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
D GHY AY K+A RW+ +D VS ++ V S YILF+
Sbjct: 1029 GLDGGHYTAYCKNAARQRWFKFDDHEVSDISISSVKSSAAYILFY 1073
>gi|24643793|ref|NP_728455.1| CG14619, isoform C [Drosophila melanogaster]
gi|386764876|ref|NP_001245799.1| CG14619, isoform F [Drosophila melanogaster]
gi|386764878|ref|NP_001245800.1| CG14619, isoform G [Drosophila melanogaster]
gi|22832693|gb|AAN09566.1| CG14619, isoform C [Drosophila melanogaster]
gi|28317311|gb|AAO39652.1| AT11044p [Drosophila melanogaster]
gi|262331596|gb|ACY46087.1| MIP13335p [Drosophila melanogaster]
gi|383293538|gb|AFH07511.1| CG14619, isoform F [Drosophila melanogaster]
gi|383293539|gb|AFH07512.1| CG14619, isoform G [Drosophila melanogaster]
Length = 938
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 157/352 (44%), Gaps = 55/352 (15%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRN+GN+C++NSV+QCL++T L F L+ H S T D + E
Sbjct: 614 GLRNIGNTCFMNSVIQCLSHTQELTRF-LRSHHGSRSLS-TKDQQILHE---------FA 662
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
K I + ++ P +++ + Q+DA EFLR+ +D+ H+
Sbjct: 663 KLIQEMWTANVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHSAL------- 715
Query: 148 RKGGGSSGGGGGGETIN--------------------GGSSVVKEIFGGALQSQVKCLAC 187
G GET+N +S+V+++F G L+S +KC C
Sbjct: 716 -------NSGVKGETLNIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQLKSTLKCTTC 768
Query: 188 GAESNKVDEIMDISLDILNS--CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
G S D D+S+ + +S C L+ + F + EVLDG+ C CK K +
Sbjct: 769 GNTSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEVLDGDEMPTCAKCKTRRKCTKSFT 828
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAF---EEVLVLSSFMCKASQDPQPEYKLFGTIV 302
I + P LVI LKRF K+ + F + L + S+ A+ + Y L+
Sbjct: 829 IQRFPKYLVIHLKRFSETRWSKLSNIVEFPTSDSELNMGSY--GANSNSNVHYSLYAISN 886
Query: 303 HSGFSPDSGHYYAYIKDAIGR-WYCCNDSYVSVS-TLQEVLSEKVYILFFIR 352
H G S GHY A K + R W+ ND+ VS + + ++S YILF+ R
Sbjct: 887 HMG-STAGGHYVALCKHPVSRKWHEFNDNIVSDALSENHLVSSSAYILFYER 937
>gi|357162360|ref|XP_003579384.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
[Brachypodium distachyon]
Length = 563
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 169/378 (44%), Gaps = 67/378 (17%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSS-LCKQLTG--DSALDAERKRECPFC 84
GL NLGN+C++NSVLQ L + PPL N+ L +H+ LC + T A A+ K C C
Sbjct: 186 GLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRFLCPRRTPMRHRAAGADAKAACLAC 245
Query: 85 ILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLK 144
L++ + S + T +PAK A + Q+DAHEF ++D H +K
Sbjct: 246 DLDEIYSATFSGERTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIHEN---IK 302
Query: 145 KLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI 204
+ K E +G + +F G L+S V C CG S + +DISLD+
Sbjct: 303 DEQHKSH---------EQGHGDCCIAHRVFSGILRSDVICTNCGFSSTTFEPCVDISLDL 353
Query: 205 ------------------------LNS--CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLV 238
NS +L +++F + E LD K+ C+ CK+
Sbjct: 354 DAGSNNSLANPKLHARNGERNLAGTNSKVSTLMRCLERFTRAERLDAEQKFFCERCKERQ 413
Query: 239 SARKQMSILQSPNILVIQLKRFEGI----FGGKIDKAIAFEEVLVLSSFMCK-------- 286
+ KQMSI + P + +KRFE K+D ++ F L ++ ++
Sbjct: 414 ESLKQMSIRRLPLVSCFHIKRFEHSSVKKMSRKVDHSLQFPFSLDMAPYLSSSVLRSRYG 473
Query: 287 ------------ASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSV 334
A + E+++F I HSG D+GHY Y++ WY C+D++V+
Sbjct: 474 NRIFPSEASDSDAVSELSSEFEIFAVITHSG-KLDAGHYVTYLR-LNNLWYRCDDAWVTR 531
Query: 335 STLQEVLSEKVYILFFIR 352
V + + Y+LF+++
Sbjct: 532 VEEHTVRTSQAYMLFYVQ 549
>gi|195498419|ref|XP_002096515.1| GE25711 [Drosophila yakuba]
gi|194182616|gb|EDW96227.1| GE25711 [Drosophila yakuba]
Length = 895
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 166/335 (49%), Gaps = 24/335 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CY+NS+LQCL+ TP L +C+ ++ + ++ + + + E I E
Sbjct: 563 GLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKNY---ISRSNKTNGQVIEEVAALIKE 619
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ V A ++ + + + F+ Q+D+HEFL ++D H+ L R
Sbjct: 620 LWNGQYKCV-----ASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPR 674
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI--- 204
++ S+ E S++ +F G ++S VKC+ C ES + ++SL++
Sbjct: 675 QREMISASEKAWLEFTKAKESMILHLFYGQMKSTVKCVVCHKESATYESFSNLSLELPPN 734
Query: 205 LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF---- 260
N C L + M +F E + G N C NCK A K++ I + P ++V+ LKRF
Sbjct: 735 SNVCQLNQCMDMYFSGERIHGWN---CPNCKTKRDAIKKLDISKLPPVMVVHLKRFYADP 791
Query: 261 --EGIFGGKIDKAIAFEEVLVLSSFMCKA-SQDPQPE-YKLFGTIVHSGFSPDSGHYYAY 316
G + K + E L ++ ++ +A S+ P+ Y+L+ H G + + GHY A+
Sbjct: 792 SNSGAYMKKQNYLRFPLENLDMNPYIARAESRAVTPKTYQLYAVSNHYG-TMEGGHYTAF 850
Query: 317 IKDA-IGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
K A G+W+ +D VS V+S YILF+
Sbjct: 851 CKSANYGKWFKFDDQVVSALDSSNVVSSAAYILFY 885
>gi|426233322|ref|XP_004010666.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Ovis
aries]
Length = 1086
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 166/345 (48%), Gaps = 27/345 (7%)
Query: 23 GGPPL-GLRNLGNSCYLNSVLQCLTYTPPLANFCLK--LQHSSLCKQLTGDSALDAERKR 79
GP L GLRNLGN+CY+NS+LQCL TP LA++ + Q L G AE
Sbjct: 740 SGPALTGLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRSNLLGHKGEVAEE-- 797
Query: 80 ECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACH-- 137
F I+ K + + +P + + + F Q+D+ E L +++D H
Sbjct: 798 ---FGIIMKAL---WTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHED 851
Query: 138 -NTCLRLKKLRRKGGGSSGGGGGGETI-----NGGSSVVKEIFGGALQSQVKCLACGAES 191
N K+ + + E S++ +F G +S V+CL C +S
Sbjct: 852 LNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKS 911
Query: 192 NKVDEIMDISLDILNS--CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQS 249
+ M +SL + ++ C+L++ ++ F + E L NN++ C +C+ + K++ I +
Sbjct: 912 RTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKL 971
Query: 250 PNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGF 306
P +L++ LKRF +G + K+ ++ F E L LS ++ + + +Y LF H G
Sbjct: 972 PPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLK-KYNLFSVSNHYG- 1029
Query: 307 SPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
D GHY AY K+A RW+ +D VS ++ V S YILF+
Sbjct: 1030 GLDGGHYTAYCKNAARQRWFKFDDHEVSDISISSVKSSAAYILFY 1074
>gi|195355562|ref|XP_002044260.1| GM15069 [Drosophila sechellia]
gi|194129561|gb|EDW51604.1| GM15069 [Drosophila sechellia]
Length = 896
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 167/335 (49%), Gaps = 24/335 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CY+NS+LQCL+ TP L +C+ ++ + ++ + + + E I E
Sbjct: 564 GLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKNY---ISRSNKTNGQVIEEVAALIKE 620
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ V A ++ + + + F+ Q+D+HEFL ++D H+ L R
Sbjct: 621 LWNGQYKCV-----ASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPR 675
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI--- 204
++ S+ E S++ +F G ++S VKC+AC ES + ++SL++
Sbjct: 676 QREMISASEKAWLEFTKAKESMILHLFYGQMKSTVKCVACHKESATYESFSNLSLELPPN 735
Query: 205 LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF---- 260
N C L + M +F E + G N C +CK A K++ I + P +LV+ LKRF
Sbjct: 736 SNVCQLNQCMDMYFSGERIHGWN---CPSCKTKRDAIKKLDISKLPPVLVVHLKRFYADP 792
Query: 261 --EGIFGGKIDKAIAFEEVLVLSSFMCKA-SQDPQPE-YKLFGTIVHSGFSPDSGHYYAY 316
G + K + E L ++ ++ +A S+ P+ Y+L+ H G + + GHY A+
Sbjct: 793 SNSGAYMKKQNYLRFPLENLDMNPYIARAESRAVTPKTYQLYAVSNHYG-TMEGGHYTAF 851
Query: 317 IKDA-IGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
K A G+W+ +D VS V+S YILF+
Sbjct: 852 CKSANYGKWFKFDDQVVSALDSSNVVSSAAYILFY 886
>gi|326502202|dbj|BAJ95164.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 408
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 156/345 (45%), Gaps = 29/345 (8%)
Query: 16 LSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDA 75
L ++ G GL N GN+CY NSVLQ L Y C+ + L + DA
Sbjct: 55 LGDQFPEGEHYFGLENFGNTCYCNSVLQALYY-------CIPFREQLLEYYANYRNPGDA 107
Query: 76 ERKRECPFCILEKRIVRSLSVDLT-LDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVID 134
E L +I SLS T + +P + +R E F+ +DAHEFL ++++
Sbjct: 108 EENLLTCLADLFAQI--SLSKKKTGVISPKRFVHRVRKQNESFRGSMHQDAHEFLNFLLN 165
Query: 135 ACHNTCLRLKKLRRKGGGSSGGGGGGETINGGS-------------SVVKEIFGGALQSQ 181
+ L+K S G NG + V + F G L ++
Sbjct: 166 EIVDI---LEKEFSTVNDSPETTSPGRVPNGEVYHLANEFRREPLVTWVHKNFQGILTNE 222
Query: 182 VKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSAR 241
KCL C + K + +D+S+DI + SL ++ FF E+L+ +K+ CDNC L A+
Sbjct: 223 TKCLMCETVTAKDETFLDLSIDIEQNSSLTSCLKSFFSTEILNAEDKFFCDNCCSLQEAQ 282
Query: 242 KQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTI 301
K+M I ++P ILVI LKRF+ I K +++ V + + AS D Y LF +
Sbjct: 283 KRMKIKKAPQILVIHLKRFKFIEQLSQHKKLSYRVVYPMELKLSSASDDVDCAYSLFAVV 342
Query: 302 VHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 346
VH G + GHY + IK W +D SV +QE + Y
Sbjct: 343 VHLGSGANQGHYVSQIKSG-DHWLSFDDD--SVDRIQESTLQTFY 384
>gi|195569249|ref|XP_002102623.1| GD19401 [Drosophila simulans]
gi|194198550|gb|EDX12126.1| GD19401 [Drosophila simulans]
Length = 896
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 167/335 (49%), Gaps = 24/335 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CY+NS+LQCL+ TP L +C+ ++ + ++ + + + E I E
Sbjct: 564 GLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKNY---ISRSNKTNGQVIEEVAALIKE 620
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ V A ++ + + + F+ Q+D+HEFL ++D H+ L R
Sbjct: 621 LWNGQYKCV-----ASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPR 675
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI--- 204
++ S+ E S++ +F G ++S VKC+AC ES + ++SL++
Sbjct: 676 QREMISASEKAWLEFTKAKESMILHLFYGQMKSTVKCVACHKESATYESFSNLSLELPPN 735
Query: 205 LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF---- 260
N C L + M +F E + G N C +CK A K++ I + P +LV+ LKRF
Sbjct: 736 SNVCQLNQCMDMYFSGERIHGWN---CPSCKTKRDAIKKLDISKLPPVLVVHLKRFYADP 792
Query: 261 --EGIFGGKIDKAIAFEEVLVLSSFMCKA-SQDPQPE-YKLFGTIVHSGFSPDSGHYYAY 316
G + K + E L ++ ++ +A S+ P+ Y+L+ H G + + GHY A+
Sbjct: 793 SNSGAYMKKQNYLRFPLENLDMNPYIARAESRAVTPKTYQLYAVSNHYG-TMEGGHYTAF 851
Query: 317 IKDA-IGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
K A G+W+ +D VS V+S YILF+
Sbjct: 852 CKSANYGKWFKFDDQVVSALDSSNVVSSAAYILFY 886
>gi|194899564|ref|XP_001979329.1| GG24410 [Drosophila erecta]
gi|190651032|gb|EDV48287.1| GG24410 [Drosophila erecta]
Length = 895
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 167/335 (49%), Gaps = 24/335 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CY+NS+LQCL+ TP L +C+ ++ + ++ + + + E I E
Sbjct: 563 GLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKNY---ISRSNKTNGQVIEEVAALIKE 619
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ V A ++ + + + F+ Q+D+HEFL ++D H+ L R
Sbjct: 620 LWNGQYKCV-----ASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPR 674
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI--- 204
++ S+ E S++ +F G ++S VKC+AC ES + ++SL++
Sbjct: 675 QREMISASEKAWLEFTKAKESMILHLFYGQMKSTVKCVACHKESATYESFSNLSLELPPN 734
Query: 205 LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF---- 260
N C L + M +F E + G N C +CK A K++ I + P +LV+ LKRF
Sbjct: 735 SNVCQLNQCMDMYFSGERIHGWN---CPSCKTKRDAIKKLDISKLPPVLVVHLKRFYADP 791
Query: 261 --EGIFGGKIDKAIAFEEVLVLSSFMCKA-SQDPQPE-YKLFGTIVHSGFSPDSGHYYAY 316
G + K + E L ++ ++ +A S+ P+ Y+L+ H G + + GHY A+
Sbjct: 792 SNSGAYMKKQNYLRFPLENLDMNPYIARAESRAVTPKTYQLYAVSNHYG-TMEGGHYTAF 850
Query: 317 IKDA-IGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
K A G+W+ +D VS V+S YILF+
Sbjct: 851 CKSANYGKWFKFDDQVVSALDSSNVVSSAAYILFY 885
>gi|195573010|ref|XP_002104488.1| GD20983 [Drosophila simulans]
gi|194200415|gb|EDX13991.1| GD20983 [Drosophila simulans]
Length = 364
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 161/354 (45%), Gaps = 41/354 (11%)
Query: 25 PP----LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
PP GL N GN+CY NSVLQ L + P L+ + + + T S L +
Sbjct: 18 PPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKETLLSCL-----AD 72
Query: 81 CPFCI-LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNT 139
+ I +K+ V S+ AP K + LR E F Q+DAHEFL ++I+ +
Sbjct: 73 LFYSIATQKKKVGSI-------APKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINEI 125
Query: 140 CLRLKKL--------RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAES 191
L + GGS+ G G N + V EIF G L S+ +CL C S
Sbjct: 126 ILAERNAGPSNGNPKATNQGGSTRNGTGTNGANSEPTWVHEIFQGILTSETRCLNCETVS 185
Query: 192 NKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPN 251
+K + D+ +D+ + S+ ++ F E L +NK+KCDNC A+K+M + + P
Sbjct: 186 SKDENFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPM 245
Query: 252 ILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQD---PQPEYKLFGTIVHSGFSP 308
IL + LKRF+ + ++ V L + S D P Y L ++H G P
Sbjct: 246 ILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGP 305
Query: 309 DSGHYYAYIKDAIGRWYCCNDSYVS---VSTLQEVL---------SEKVYILFF 350
+ GHY + +K + G W +D V ST+++ SE YILF+
Sbjct: 306 NRGHYISIVK-SHGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSSETGYILFY 358
>gi|195379222|ref|XP_002048379.1| GJ11383 [Drosophila virilis]
gi|194155537|gb|EDW70721.1| GJ11383 [Drosophila virilis]
Length = 704
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 172/385 (44%), Gaps = 50/385 (12%)
Query: 4 AHELQMS--WQPS---------LLSEKRKRGGPP---LGLR---NLGNSCYLNSVLQCLT 46
A +LQ S WQP LL+ R+R P +GLR NLG +C++N ++Q L
Sbjct: 324 AKDLQKSLGWQPWIPTPKETNLLLANARRRLVRPNQTIGLRGLLNLGATCFMNCIVQALV 383
Query: 47 YTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKI 106
+TP L+++ + +H D A K C C + + S + + ++
Sbjct: 384 HTPLLSDYFMSDRH---------DCGSKATHK--CLVCEVSRLFQEFYSGSRSPLSLHRL 432
Query: 107 QSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK----------LRRKGGGSSGG 156
+ A+H Q+DAHEF +D H C++ K S G
Sbjct: 433 LHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKSEHESKSNSSSASGGNSSSGGN 492
Query: 157 GGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI--------LNSC 208
+ ++ +IF G LQS V C AC S D DISLD+ +
Sbjct: 493 ATATHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTFDPFWDISLDLGETTTHGGVTPK 552
Query: 209 SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGG 266
+L + ++++ + E L K KC CK + KQ S+ P+++ LKRFE +
Sbjct: 553 TLIDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEHSALIDR 612
Query: 267 KIDKAIAFEEVLVLSSFMC-KASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWY 325
KI I F ++ FM K + + L+ + H G + D+GHY AY++ W
Sbjct: 613 KISSFIQFPVEFDMTPFMSEKNNAYGDFRFSLYAVVNHVG-TIDTGHYTAYVRHQKDTWV 671
Query: 326 CCNDSYVSVSTLQEVLSEKVYILFF 350
C+D +++++L++VL + Y+LF+
Sbjct: 672 KCDDHVITMASLKQVLDSEGYLLFY 696
>gi|195399524|ref|XP_002058369.1| GJ14347 [Drosophila virilis]
gi|194141929|gb|EDW58337.1| GJ14347 [Drosophila virilis]
Length = 363
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 163/352 (46%), Gaps = 39/352 (11%)
Query: 25 PP----LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
PP GL N GN+CY NSVLQ L + P L+ + + + T S L +
Sbjct: 18 PPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKETLLSCL-----AD 72
Query: 81 CPFCI-LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNT 139
+ I +K+ V S+ AP K + LR E F Q+DAHEFL ++I+ +
Sbjct: 73 LFYSIATQKKKVGSI-------APKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINEI 125
Query: 140 CLRLKKLRRKGGGSSGGG---GGGETINGGSS---VVKEIFGGALQSQVKCLACGAESNK 193
L + G ++ GG G NG ++ V EIF G L S+ +CL C S+K
Sbjct: 126 ILAERNTGSSTGKTAAGGAIPGPNAQTNGANTEPTWVHEIFQGILTSETRCLNCETVSSK 185
Query: 194 VDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
+ D+ +D+ + S+ ++ F E L +NK+KCDNC A+K+M + + P IL
Sbjct: 186 DENFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMIL 245
Query: 254 VIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQD---PQPEYKLFGTIVHSGFSPDS 310
+ LKRF+ + ++ V L + S D P Y L ++H G P+
Sbjct: 246 ALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNR 305
Query: 311 GHYYAYIKDAIGRWYCCNDSYVS---VSTLQEVL---------SEKVYILFF 350
GHY + +K + G W +D V ST+++ SE YILF+
Sbjct: 306 GHYISIVK-SHGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSSETGYILFY 356
>gi|123998135|gb|ABM86669.1| ubiquitin specific peptidase 2 [synthetic construct]
Length = 605
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 165/341 (48%), Gaps = 30/341 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L +AL E F L
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEE------FAKL 321
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
+ I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN R+ L
Sbjct: 322 IQTIWTSSPNDVV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRV-TL 378
Query: 147 RRKGGGSS---------GGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEI 197
R K + G + + S + ++F G L+S + C CG S D
Sbjct: 379 RPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPF 438
Query: 198 MDISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
D+SL I +L + M+ F + +VLDG+ K C C+ K+ SI + P IL
Sbjct: 439 WDLSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKIL 498
Query: 254 VIQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS 310
V+ LKRF I K+ + F L L F + + Y L+ HSG +
Sbjct: 499 VLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMG 555
Query: 311 GHYYAYIKD-AIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
GHY AY + G W+ NDS V+ + ++V + Y+LF+
Sbjct: 556 GHYTAYCRSPGTGEWHTFNDSSVTPMSSRQVRTSDAYLLFY 596
>gi|51592088|ref|NP_446226.2| ubiquitin carboxyl-terminal hydrolase 2 [Rattus norvegicus]
gi|6492126|gb|AAF14190.1|AF106659_1 deubiquitinating enzyme Ubp69 [Rattus norvegicus]
Length = 618
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 163/340 (47%), Gaps = 28/340 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L + +AL E F L
Sbjct: 281 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEE------FAKL 334
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRL--- 143
+ I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN R+
Sbjct: 335 IQTIWTSSPNDVV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAAR 392
Query: 144 -----KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ L G + + S + ++F G L+S + C CG S D
Sbjct: 393 PKPSPESLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFW 452
Query: 199 DISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILV 254
D+SL I +L + M+ F + +VLDG+ K C C+ K+ S+ + P ILV
Sbjct: 453 DLSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILV 512
Query: 255 IQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSG 311
+ LKRF I K+ + F L L F + + Y L+ HSG + G
Sbjct: 513 LHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMGG 569
Query: 312 HYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HY AY + + G W+ NDS V+ + +V + Y+ F+
Sbjct: 570 HYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLFFY 609
>gi|301620627|ref|XP_002939670.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Xenopus
(Silurana) tropicalis]
Length = 1059
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 165/354 (46%), Gaps = 33/354 (9%)
Query: 23 GGPPL-GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQ--LTGDSALDAERKR 79
GP L GLRNLGN+CY+NS+LQCL TP L + + + + L G AE
Sbjct: 713 AGPALTGLRNLGNTCYMNSILQCLCNTPHLIEYFNNNFYQAHINRSNLLGHKGEVAEE-- 770
Query: 80 ECPF-CILEKRIVRSLSV-DLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACH 137
F CI+ R+L +P + + E F +D+ E L +++D H
Sbjct: 771 ---FGCIM-----RALWTGQYKYISPKDFKITIGKINEQFAGYTHQDSQELLLFLMDGLH 822
Query: 138 NTCLRLKKLRRK---------GGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACG 188
+ R++ + + S++ +F G +S V+CL C
Sbjct: 823 EDLNKKADNRKRQKEENNDHLSDSQAADSAWYKHKQLNESIIVALFQGQFKSTVQCLTCQ 882
Query: 189 AESNKVDEIMDISLDILNS--CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSI 246
+S + M +SL + ++ CSL++ ++ F + E L +N++ C NCK A K++ I
Sbjct: 883 KKSRTFEAFMYLSLPLPSTSKCSLQDCIKAFAKEEKLTDSNRFDCSNCKTQRVATKKIEI 942
Query: 247 LQSPNILVIQLKR--FEGIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVH 303
+ P IL++ LKR FEG + K+ + F E L LS ++ Y LFG H
Sbjct: 943 WKLPPILLVHLKRFSFEGRWRQKLQSYVDFPLESLDLSQYVIGPKN--VKTYNLFGVSNH 1000
Query: 304 SGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR 356
G D GHY AY K+A+ RW+ +D VS ++ V + Y+LF+ + R
Sbjct: 1001 YG-GLDGGHYTAYCKNALKQRWFKFDDHDVSEISVSSVKTSAAYMLFYTSLDAR 1053
>gi|19920418|ref|NP_608462.1| CG14619, isoform A [Drosophila melanogaster]
gi|24643789|ref|NP_728453.1| CG14619, isoform D [Drosophila melanogaster]
gi|24643791|ref|NP_728454.1| CG14619, isoform E [Drosophila melanogaster]
gi|17862942|gb|AAL39948.1| SD04280p [Drosophila melanogaster]
gi|22832690|gb|AAF50952.2| CG14619, isoform A [Drosophila melanogaster]
gi|22832691|gb|AAN09564.1| CG14619, isoform D [Drosophila melanogaster]
gi|22832692|gb|AAN09565.1| CG14619, isoform E [Drosophila melanogaster]
Length = 856
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 157/353 (44%), Gaps = 55/353 (15%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRN+GN+C++NSV+QCL++T L F L+ H S T D + E
Sbjct: 532 GLRNIGNTCFMNSVIQCLSHTQELTRF-LRSHHGSRSLS-TKDQQILHE---------FA 580
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
K I + ++ P +++ + Q+DA EFLR+ +D+ H+
Sbjct: 581 KLIQEMWTANVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHSAL------- 633
Query: 148 RKGGGSSGGGGGGETIN--------------------GGSSVVKEIFGGALQSQVKCLAC 187
G GET+N +S+V+++F G L+S +KC C
Sbjct: 634 -------NSGVKGETLNIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQLKSTLKCTTC 686
Query: 188 GAESNKVDEIMDISLDILNS--CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
G S D D+S+ + +S C L+ + F + EVLDG+ C CK K +
Sbjct: 687 GNTSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEVLDGDEMPTCAKCKTRRKCTKSFT 746
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAF---EEVLVLSSFMCKASQDPQPEYKLFGTIV 302
I + P LVI LKRF K+ + F + L + S+ A+ + Y L+
Sbjct: 747 IQRFPKYLVIHLKRFSETRWSKLSNIVEFPTSDSELNMGSY--GANSNSNVHYSLYAISN 804
Query: 303 HSGFSPDSGHYYAYIKDAIGR-WYCCNDSYVSVS-TLQEVLSEKVYILFFIRA 353
H G S GHY A K + R W+ ND+ VS + + ++S YILF+ R
Sbjct: 805 HMG-STAGGHYVALCKHPVSRKWHEFNDNIVSDALSENHLVSSSAYILFYERT 856
>gi|194910722|ref|XP_001982216.1| GG11165 [Drosophila erecta]
gi|190656854|gb|EDV54086.1| GG11165 [Drosophila erecta]
Length = 364
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 161/354 (45%), Gaps = 41/354 (11%)
Query: 25 PP----LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
PP GL N GN+CY NSVLQ L + P L+ + + + T S L +
Sbjct: 18 PPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKETLLSCL-----AD 72
Query: 81 CPFCI-LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNT 139
+ I +K+ V S+ AP K + LR E F Q+DAHEFL ++I+ +
Sbjct: 73 LFYSIATQKKKVGSI-------APKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINEI 125
Query: 140 CLRLKKL--------RRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAES 191
L + GGS+ G G N + V EIF G L S+ +CL C S
Sbjct: 126 ILAERNAGPSNGNPKSSSQGGSTRNGTGTNGANSEPTWVHEIFQGILTSETRCLNCETVS 185
Query: 192 NKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPN 251
+K + D+ +D+ + S+ ++ F E L +NK+KCDNC A+K+M + + P
Sbjct: 186 SKDENFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPM 245
Query: 252 ILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQD---PQPEYKLFGTIVHSGFSP 308
IL + LKRF+ + ++ V L + S D P Y L ++H G P
Sbjct: 246 ILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGP 305
Query: 309 DSGHYYAYIKDAIGRWYCCNDSYVS---VSTLQEVL---------SEKVYILFF 350
+ GHY + +K + G W +D V ST+++ SE YILF+
Sbjct: 306 NRGHYISIVK-SHGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSSETGYILFY 358
>gi|156549078|ref|XP_001607506.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Nasonia
vitripennis]
Length = 513
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 173/397 (43%), Gaps = 74/397 (18%)
Query: 6 ELQMSWQPSLLSEKRKRGGP---------PLGLR---NLGNSCYLNSVLQCLTYTPPLAN 53
E +W+PS+ + R P +GLR NLG++C++N ++Q L +TP L +
Sbjct: 126 EFYRTWEPSVNEVELLRKNPRRRRVVENSTIGLRGLINLGSTCFMNCIVQALIHTPLLRD 185
Query: 54 FCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIF 113
+ L +H C Q C C + S + K+ +
Sbjct: 186 YFLADRHH--CPQ-----------PNRCLVCEVSSLFQEFYSGNKAPLILHKLLHLIWTH 232
Query: 114 AEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEI 173
A H Q+DAHEF +D H C + + + + + + ++ +I
Sbjct: 233 ARHLAGYEQQDAHEFFIATLDVLHRHCEQYSQ--------AAPLIVKDNPHHCNCIIDQI 284
Query: 174 FGGALQSQVKCLACGAESNKVDEIMDISLDILNSC-----------------SLKEAMQK 216
F G LQS V C AC S +D DISLD+ + SL + +++
Sbjct: 285 FTGGLQSDVVCQACNGVSTTIDPFWDISLDLGPAAVSSSTSGMANDGSSAPTSLLDCLER 344
Query: 217 FFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAF 274
F + E L + K KC+NC+ + KQ+++ Q P + LKRFE I KI I+F
Sbjct: 345 FTRAEHLGSSAKIKCNNCQTYQESTKQLTMKQLPIVASFHLKRFEHSSIQDKKISTFISF 404
Query: 275 EEVLVLSSFMC------------------KASQDP---QPEYKLFGTIVHSGFSPDSGHY 313
E L ++ FM K +DP Y LF I H G S ++GHY
Sbjct: 405 PEQLDMTPFMSHRRNGNNNSSSVAPTGLHKNGEDPAFSDNRYSLFAVINHEG-SLETGHY 463
Query: 314 YAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
A+I+ +W+ C+D ++ + L++VL+ + Y+LF+
Sbjct: 464 TAFIRQQRDQWFKCDDHLITRARLKDVLTSEGYLLFY 500
>gi|397498540|ref|XP_003820038.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Pan paniscus]
Length = 605
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 164/341 (48%), Gaps = 30/341 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L +AL E F L
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEE------FAKL 321
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
+ I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN R+ L
Sbjct: 322 IQTIWTSSPNDVV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRV-TL 378
Query: 147 RRKGGGSS---------GGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEI 197
R K + G + + S + ++F G L+S + C CG S D
Sbjct: 379 RPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPF 438
Query: 198 MDISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
D+SL I +L + M+ F + +VLDG+ K C C+ K+ SI + P IL
Sbjct: 439 WDLSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKIL 498
Query: 254 VIQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS 310
V+ LKRF I K+ + F L L F + + Y L+ HSG +
Sbjct: 499 VLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMG 555
Query: 311 GHYYAYIKD-AIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
GHY AY + G W+ NDS V+ + +V + Y+LF+
Sbjct: 556 GHYTAYCRSPGTGEWHTFNDSSVTPMSPSQVRTSDAYLLFY 596
>gi|114640783|ref|XP_001166112.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 5 [Pan
troglodytes]
Length = 605
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 164/341 (48%), Gaps = 30/341 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L +AL E F L
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEE------FAKL 321
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
+ I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN R+ L
Sbjct: 322 IQTIWTSSPNDVV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRV-TL 378
Query: 147 RRKGGGSS---------GGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEI 197
R K + G + + S + ++F G L+S + C CG S D
Sbjct: 379 RPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPF 438
Query: 198 MDISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
D+SL I +L + M+ F + +VLDG+ K C C+ K+ SI + P IL
Sbjct: 439 WDLSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKIL 498
Query: 254 VIQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS 310
V+ LKRF I K+ + F L L F + + Y L+ HSG +
Sbjct: 499 VLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMG 555
Query: 311 GHYYAYIKD-AIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
GHY AY + G W+ NDS V+ + +V + Y+LF+
Sbjct: 556 GHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 596
>gi|194751819|ref|XP_001958221.1| GF10813 [Drosophila ananassae]
gi|190625503|gb|EDV41027.1| GF10813 [Drosophila ananassae]
Length = 668
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 173/383 (45%), Gaps = 48/383 (12%)
Query: 4 AHELQMS--WQPS---------LLSEKRKRGGPP---LGLR---NLGNSCYLNSVLQCLT 46
A +LQ S WQP LL+ R+R P +GLR NLG +C++N ++Q L
Sbjct: 290 AKDLQKSLGWQPWIPTAKETNLLLANARRRLVRPNQTIGLRGLLNLGATCFMNCIVQALV 349
Query: 47 YTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKI 106
+TP L+++ + +H ++ +C C + + S + + ++
Sbjct: 350 HTPLLSDYFMSDRHDC-----------GSKSSHKCLVCEVSRLFQEFYSGSRSPLSLHRL 398
Query: 107 QSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRK--------GGGSSGGGG 158
+ A+H Q+DAHEF +D H C++ K G +S
Sbjct: 399 LHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHENKSNSSSSGSGTNSSSSS 458
Query: 159 GGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCS--------L 210
+ ++ +IF G LQS V C AC S D DISLD+ + + L
Sbjct: 459 SSHCYGQCNCIIDQIFTGMLQSDVVCQACNGVSTTFDPFWDISLDLGETTTHGGVTPKTL 518
Query: 211 KEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKI 268
+ ++++ + E L K KC CK + KQ S+ P+++ LKRFE + KI
Sbjct: 519 IDCLERYTRAEHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEHSALIDRKI 578
Query: 269 DKAIAFEEVLVLSSFMC-KASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 327
I F ++ FM K + + L+ + H G + D+GHY AY++ W C
Sbjct: 579 SSFIQFPVEFDMTPFMSEKKNAYGDFRFSLYAVVNHVG-TIDTGHYTAYVRHQKDTWVKC 637
Query: 328 NDSYVSVSTLQEVLSEKVYILFF 350
+D +++++L++VL + Y+LF+
Sbjct: 638 DDHVITMASLKQVLDSEGYLLFY 660
>gi|410981888|ref|XP_004001484.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36-like, partial [Felis catus]
Length = 872
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 94/146 (64%), Gaps = 1/146 (0%)
Query: 207 SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG 266
+ ++ A++ F +P+VL G N Y C CKK V A K+ +I ++ N+L + LKRF GG
Sbjct: 2 AANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGG 61
Query: 267 KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYC 326
KI K + + E L L +M ++S +P Y L+ +VHSG+S +GHYY Y+K + G+WY
Sbjct: 62 KITKDVGYPEFLNLRPYMSQSSGEPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 120
Query: 327 CNDSYVSVSTLQEVLSEKVYILFFIR 352
NDS V S ++ VL+++ Y+LF+++
Sbjct: 121 MNDSSVRSSNIKVVLNQQAYVLFYMQ 146
>gi|194680854|ref|XP_001255420.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Bos taurus]
Length = 333
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 106/180 (58%), Gaps = 1/180 (0%)
Query: 173 IFGGALQSQVKCLACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCD 232
+FGG +SQ++CL C S+ D +DISLDI + S+++A+++ +PE LD +N Y C
Sbjct: 1 MFGGCDRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDCG 60
Query: 233 NCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 292
C + V A K++++ + +LV+ LKRF + G K + + + + L L + + P
Sbjct: 61 VCLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAKRAQEVRYPQCLDLQPYTSERKAGPL 120
Query: 293 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 352
Y L+ +VHSG+S + GHY+ Y++ G+WY +D+ V+ LS+ Y+LF+ R
Sbjct: 121 -GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 179
>gi|322790247|gb|EFZ15246.1| hypothetical protein SINV_08745 [Solenopsis invicta]
Length = 355
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 159/357 (44%), Gaps = 56/357 (15%)
Query: 25 PP----LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
PP GL N GN+CY NSVLQ L + P L+ + A + K
Sbjct: 18 PPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYK------------ARNKRTKET 65
Query: 81 CPFCI--------LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYV 132
C+ +K+ V S+ AP K + LR E F Q+DAHEFL ++
Sbjct: 66 LLTCLADLFYSIATQKKKVGSI-------APKKFIARLRKEKEEFDNYMQQDAHEFLNFL 118
Query: 133 IDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGS----SVVKEIFGGALQSQVKCLACG 188
I+ + L + + GG G G GS + V EIF G L S+ +CL C
Sbjct: 119 INHINEIILAERTQSKPTGGKCGAGDAA-----GSPPEPTWVHEIFQGILTSETRCLNCE 173
Query: 189 AESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQ 248
S+K ++ D+ +D+ + S+ ++ F E L +NK+KCD+C A+K+M + +
Sbjct: 174 TVSSKDEDFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDHCSSYQEAQKRMRVKK 233
Query: 249 SPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQD---PQPEYKLFGTIVHSG 305
P IL + LKRF+ + ++ V L + S D P Y L ++H G
Sbjct: 234 LPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCG 293
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYV---SVSTLQEVL---------SEKVYILFF 350
P+ GHY + +K + G W +D V ST+++ SE YILF+
Sbjct: 294 SGPNRGHYISIVK-SHGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSSETGYILFY 349
>gi|414869932|tpg|DAA48489.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 656
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 109/207 (52%), Gaps = 24/207 (11%)
Query: 26 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCI 85
P GL NLGNSCY N+V QCL +T PL + L+ HS C Q C C
Sbjct: 459 PFGLHNLGNSCYANAVFQCLMFTRPLTTYLLEGLHSKNCSQ-----------NGWCFMCE 507
Query: 86 LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKK 145
EK IV + L +P I S L F G+QEDAHEFLRY IDA + C+ K
Sbjct: 508 FEKLIVEGKRRKIAL-SPTGILSHLNDIGSSFGPGKQEDAHEFLRYAIDAMQSVCM---K 563
Query: 146 LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDIL 205
RKGG +++V+ IFGG L+S++KC C S + + ++D++++I
Sbjct: 564 EARKGGVLQSA--------EETTLVQLIFGGYLRSKIKCSRCHVSSEQCEPMLDLTVEID 615
Query: 206 -NSCSLKEAMQKFFQPEVLDGNNKYKC 231
+ SL EA+ +F EVLDG NKY C
Sbjct: 616 GDISSLGEALVRFTSTEVLDGENKYHC 642
>gi|307207931|gb|EFN85490.1| Ubiquitin carboxyl-terminal hydrolase 46 [Harpegnathos saltator]
Length = 353
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 158/353 (44%), Gaps = 50/353 (14%)
Query: 25 PP----LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRE 80
PP GL N GN+CY NSVLQ L + P L+ + A + K
Sbjct: 18 PPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYK------------ARNKRTKET 65
Query: 81 CPFCI--------LEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYV 132
C+ +K+ V S+ AP K + LR E F Q+DAHEFL ++
Sbjct: 66 LLTCLADLFYSIATQKKKVGSI-------APKKFIARLRKEKEEFDNYMQQDAHEFLNFL 118
Query: 133 IDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESN 192
I+ + L + + GG G G G + V EIF G L S+ +CL C S+
Sbjct: 119 INHINEIILE-RTQSKPAGGKCGAGDAGSP--PEPTWVHEIFQGILTSETRCLNCETVSS 175
Query: 193 KVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNI 252
K ++ D+ +D+ + S+ ++ F E L +NK+KCD+C A+K+M + + P I
Sbjct: 176 KDEDFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDHCSSYQEAQKRMRVKKLPMI 235
Query: 253 LVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQD---PQPEYKLFGTIVHSGFSPD 309
L + LKRF+ + ++ V L + S D P Y L ++H G P+
Sbjct: 236 LALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPN 295
Query: 310 SGHYYAYIKDAIGRWYCCNDSYV---SVSTLQEVL---------SEKVYILFF 350
GHY + +K + G W +D V ST+++ SE YILF+
Sbjct: 296 RGHYISIVK-SHGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSSETGYILFY 347
>gi|397635885|gb|EJK72050.1| hypothetical protein THAOC_06457, partial [Thalassiosira oceanica]
Length = 528
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 153/317 (48%), Gaps = 19/317 (5%)
Query: 27 LGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCIL 86
+GL NLGN+C+LNS +QCL+ T PL ++ L + S ++ D+ L ++ + +
Sbjct: 107 VGLSNLGNTCFLNSSVQCLSNTIPLTDYFLGYDYRS---EINHDNFLGSKGALASSYAEV 163
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLK-K 145
K + L +P + +S L FA F +Q DA E L Y++D H R+K K
Sbjct: 164 VKHLW--LGQGAQHYSPGRFKSSLAKFAPQFDGSQQHDAQELLAYLLDGMHEDLNRVKSK 221
Query: 146 LRRKGGGSSGGGGGGETINGGS-------SVVKEIFGGALQSQVKCLACGAESNKVDEIM 198
+ G + I S S+V ++F G L+S++ C CG S K D M
Sbjct: 222 PYIEDDDCDGSNDDVDAIAAWSNYLRRDQSIVVDLFQGQLRSRMTCSVCGKVSVKFDSFM 281
Query: 199 DISLDILNSC-SLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQL 257
+SL + C +L + + F + E L G++ + C CK V A K+M + P IL++ L
Sbjct: 282 YLSLPVTADCRTLDDCLGLFCEEEYLSGDDAWYCPRCKCHVDAAKKMDLFMLPPILIVHL 341
Query: 258 KRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYY 314
KRFE G KI++ I++ S K +P Y L+ HSG + GHY
Sbjct: 342 KRFEFSESGRRSKIERDISYPLSEWDLSSSKKGEGGLRPVYDLYAACHHSG-TAGGGHYT 400
Query: 315 AYIKDAI-GRWYCCNDS 330
A + GRWY NDS
Sbjct: 401 ATAVNRFDGRWYRFNDS 417
>gi|148693613|gb|EDL25560.1| ubiquitin specific peptidase 2, isoform CRA_a [Mus musculus]
Length = 411
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 168/353 (47%), Gaps = 28/353 (7%)
Query: 15 LLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSAL 73
LL K K GLRNLGN+C++NS+LQCL+ T L ++CL +L L + +AL
Sbjct: 61 LLLNKAKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTAL 120
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
E F L + I S D+ +P++ ++ ++ +A F Q+DA EFLR+++
Sbjct: 121 MEE------FAKLIQTIWTSSPNDVV--SPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLL 172
Query: 134 DACHNTCLRL--------KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
D HN R+ + L G + + S + ++F G L+S + C
Sbjct: 173 DGLHNEVNRVAARPKASPETLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCT 232
Query: 186 ACGAESNKVDEIMDISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSAR 241
CG S D D+SL I +L + M+ F + ++LDG+ K C C+
Sbjct: 233 DCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLFTKEDILDGDEKPTCCRCRARKRCI 292
Query: 242 KQMSILQSPNILVIQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLF 298
K+ S+ + P ILV+ LKRF I K+ + F L L F + + Y L+
Sbjct: 293 KKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLY 350
Query: 299 GTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HSG + GHY AY + + G W+ NDS V+ + +V + Y+LF+
Sbjct: 351 AVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 402
>gi|28571791|ref|NP_650948.2| UBPY ortholog, isoform A [Drosophila melanogaster]
gi|28381390|gb|AAF55858.2| UBPY ortholog, isoform A [Drosophila melanogaster]
gi|384551736|gb|AFH97157.1| FI20021p1 [Drosophila melanogaster]
Length = 896
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 167/335 (49%), Gaps = 24/335 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GL+NLGN+CY+NS+LQCL+ TP L +C+ ++ + ++ + + + E I E
Sbjct: 564 GLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKNY---ISRSNKTNGQVIEEVAALIKE 620
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+ V A ++ + + + F+ Q+D+HEFL ++D H+ L R
Sbjct: 621 LWNGQYKCV-----ASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPR 675
Query: 148 RKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEIMDISLDI--- 204
++ S+ E S++ +F G ++S VKC+AC ES + ++SL++
Sbjct: 676 QREMISASEKAWLEFTKAKESMILHLFYGQMKSTVKCVACHKESATYESFSNLSLELPPN 735
Query: 205 LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRF---- 260
N C L + M +F E + G N C +CK A K++ I + P +LV+ LKRF
Sbjct: 736 SNVCQLNQCMDMYFSGERIHGWN---CPSCKTKRDAIKKLDISKLPPVLVVHLKRFYADP 792
Query: 261 --EGIFGGKIDKAIAFEEVLVLSSFMCKA-SQDPQPE-YKLFGTIVHSGFSPDSGHYYAY 316
G + K + E L ++ ++ +A S+ P+ Y+L+ H G + + GHY A+
Sbjct: 793 SNSGSYMKKQNYLRFPLENLDMNPYIARAESRAVTPKTYQLYAVSNHYG-TMEGGHYTAF 851
Query: 317 IKDA-IGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
K A G+W+ +D VS V+S YILF+
Sbjct: 852 CKSANYGKWFKFDDQVVSALDSSNVVSSAAYILFY 886
>gi|449489446|ref|XP_002194208.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Taeniopygia
guttata]
Length = 625
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 164/339 (48%), Gaps = 26/339 (7%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDAERKRECPFCILE 87
GLRNLGN+C++NS+LQCL+ + L ++CL+ Q+ + L +S + E I
Sbjct: 288 GLRNLGNTCFMNSILQCLSNSKELRDYCLQNQY---LRDLNNNSRMRTALMSEFAKLI-- 342
Query: 88 KRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLR 147
+++ + S + ++ +P++ ++ ++ +A F Q+DA EFLR+++D H+ R+
Sbjct: 343 -QLLWTSSPNESV-SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHSEVNRVLVRP 400
Query: 148 RKGGGSSGGGGGGETING--------GSSVVKEIFGGALQSQVKCLACGAESNKVDEIMD 199
R S E S + ++F G L+S + C CG S D D
Sbjct: 401 RASTDSLDHLPDDEKSRQMWRRYQEREDSRISDLFVGQLKSSLTCSECGYCSTAFDPFWD 460
Query: 200 ISLDI----LNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVI 255
+SL I +L + ++ F + +VLDG+ K C CK K+ SI + P ILV+
Sbjct: 461 LSLPIPKKGYGEVTLMDCLRLFTKEDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVL 520
Query: 256 QLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGH 312
LKRF I K+ + F + L L F ++ Y L+ HSG + GH
Sbjct: 521 HLKRFSEARIRSSKLTTFVNFPLKDLDLREFASQSCN--HAVYNLYAVSNHSG-TTMGGH 577
Query: 313 YYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
Y AY K + W+ NDS V+ + V S Y+LF+
Sbjct: 578 YTAYCKSPVSSEWHSFNDSRVTPMSSSHVRSSDAYLLFY 616
>gi|7670525|dbj|BAA95110.1| unnamed protein product [Mus musculus]
Length = 393
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 168/353 (47%), Gaps = 28/353 (7%)
Query: 15 LLSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSAL 73
LL K K GLRNLGN+C++NS+LQCL+ T L ++CL +L L + +AL
Sbjct: 43 LLLNKAKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTAL 102
Query: 74 DAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVI 133
E F L + I S D+ +P++ ++ ++ +A F Q+DA EFLR+++
Sbjct: 103 MEE------FAKLIQTIWTSSPNDVV--SPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLL 154
Query: 134 DACHNTCLRL--------KKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
D HN R+ + L G + + S + ++F G L+S + C
Sbjct: 155 DGLHNEVNRVAARPKASPETLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCT 214
Query: 186 ACGAESNKVDEIMDISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSAR 241
CG S D D+SL I +L + M+ F + ++LDG+ K C C+
Sbjct: 215 DCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLFTKEDILDGDEKPTCCRCRARKRCI 274
Query: 242 KQMSILQSPNILVIQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLF 298
K+ S+ + P ILV+ LKRF I K+ + F L L F + + Y L+
Sbjct: 275 KKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLY 332
Query: 299 GTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
HSG + GHY AY + + G W+ NDS V+ + +V + Y+LF+
Sbjct: 333 AVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 384
>gi|346470779|gb|AEO35234.1| hypothetical protein [Amblyomma maculatum]
Length = 499
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 167/395 (42%), Gaps = 84/395 (21%)
Query: 6 ELQMSWQPS-----LLSE--KRKR--GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLAN 53
E W+PS LL +RKR +GLR NLGN+C++N ++Q LT+TP L +
Sbjct: 126 EYYHHWEPSSFELDLLRRNPRRKRIANNSYIGLRGLINLGNTCFMNCIVQALTHTPLLRD 185
Query: 54 FCLKLQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIF 113
+ L +H +C Q D A+ C C + + + P ++ +
Sbjct: 186 YFLADRH--VC-QFRDDPAM-------CLVCEMSRLFQEFYCGKSSPHIPYRLLHLVWTH 235
Query: 114 AEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETIN--GGSSVVK 171
A H Q+DAHEF +D H C G G T N + ++
Sbjct: 236 ARHLAGYEQQDAHEFFIATLDVLHRHC--------------KGTNGMSTTNPHHCNCIID 281
Query: 172 EIFGGALQSQVKCLACGAESNKVDEIMDISLDI-----------------LNSCSLKEAM 214
+IF G LQS V C +C S +D DISLD+ SL + +
Sbjct: 282 QIFTGGLQSDVVCQSCKGVSTTIDPFWDISLDLGPSSHLQQHNPSSEAEDTEPTSLLDCL 341
Query: 215 QKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAI 272
++F +PE L + K +C C + KQ+++ Q P + LKRFE F KI I
Sbjct: 342 ERFTRPEHLGSSAKIRCGRCDSYQESTKQLTMKQLPVVCSFHLKRFEHSSRFHKKISSLI 401
Query: 273 AFEEVLVLSSFMC--------------------------KASQDPQPEYKLFGTIVHSGF 306
+F + L +S FM +Y LF + HSG
Sbjct: 402 SFPQYLDMSPFMSGPRAPSSNSSSTSASAKGRPSSPSSAPPQPCHDNKYCLFAVVNHSG- 460
Query: 307 SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVL 341
+ ++GHY AY++ W+ C+D ++ ++LQ+VL
Sbjct: 461 TIETGHYTAYVRQHRDHWFKCDDHLITRASLQDVL 495
>gi|291414911|ref|XP_002723699.1| PREDICTED: ubiquitin thiolesterase 22 [Oryctolagus cuniculus]
Length = 529
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 165/385 (42%), Gaps = 76/385 (19%)
Query: 10 SWQPS-----LLSEKRKR----GGPPLGLR---NLGNSCYLNSVLQCLTYTPPLANFCLK 57
+W+P+ LL KR +GLR NLGN+C++N ++Q LT+TP L +F L
Sbjct: 147 TWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHTPLLRDFFLS 206
Query: 58 LQHSSLCKQLTGDSALDAERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHF 117
+H + + C C + S + P K+ + A H
Sbjct: 207 DRHRC-----------EMQSPSSCLVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHL 255
Query: 118 KCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGGGSSGGGGGGETINGGSSVVKEIFGGA 177
Q+DAHEFL +D H C KG G N + ++ +IF G
Sbjct: 256 AGYEQQDAHEFLIAALDVLHRHC--------KG---DDNGKKANNPNHCNCIIDQIFTGG 304
Query: 178 LQSQVKCLACGAESNKVDEIMDISLD-------------------------ILNSCSLKE 212
LQS V C C S +D DISLD + + +L +
Sbjct: 305 LQSDVTCQVCHGVSTTIDPFWDISLDLPGCSTPFWPLSPGSEGSVVNGESHVSGTTTLTD 364
Query: 213 AMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDK 270
+++F +PE L + K KC C + KQ+++ + P + LKRFE KI
Sbjct: 365 CLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITT 424
Query: 271 AIAFEEVLVLSSFMCKAS------QDPQP--------EYKLFGTIVHSGFSPDSGHYYAY 316
++F L ++ FM + Q QP +Y LF + H G + +SGHY ++
Sbjct: 425 YVSFPLELDMTPFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSF 483
Query: 317 IKDAIGRWYCCNDSYVSVSTLQEVL 341
I+ +W+ C+D+ ++ +++++VL
Sbjct: 484 IRQHKDQWFKCDDAIITKASIKDVL 508
>gi|326527689|dbj|BAK08119.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 366
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 146/330 (44%), Gaps = 19/330 (5%)
Query: 16 LSEKRKRGGPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLCKQLTGDSALDA 75
L E+ G GL N GN+CY NSVLQ L FC+ + L SA D
Sbjct: 12 LGEQFPEGERYFGLENFGNTCYCNSVLQALY-------FCVPFREQLLEYYANNKSASDG 64
Query: 76 ERKRECPFCILEKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYV--- 132
E L +I + AP + L+ E F+ +DAHEFL ++
Sbjct: 65 EENMLTCLADLFSQISNQKKKTGVI-APKRFIQRLKKQNELFRSYMHQDAHEFLNFLLNE 123
Query: 133 -IDACHNTCLRLKK------LRRKGGGSSGGGGGGETINGGSSVVKEIFGGALQSQVKCL 185
+D C K+ + G G G ++ V + F G L +Q KCL
Sbjct: 124 LVDILEKECKANKEPSQNSSSNKNSNGPVNGQPNGSHKEPDTTWVHKCFQGILTNQTKCL 183
Query: 186 ACGAESNKVDEIMDISLDILNSCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMS 245
C +++ + +D+SLDI + S+ ++ F E L+ +K+ CD C L A+K+M
Sbjct: 184 RCETVTDRDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMK 243
Query: 246 ILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSG 305
I + PNILVI LKRF+ I K + + V L + + EY LF +VH G
Sbjct: 244 IKKQPNILVIHLKRFKYIEQLGRYKKLTYRVVFPLELKLMNTVDNSDLEYSLFAVLVHVG 303
Query: 306 FSPDSGHYYAYIKDAIGRWYCCNDSYVSVS 335
P+ GHY + +K + W +D V ++
Sbjct: 304 SGPNHGHYISVVK-SHNHWLFFDDETVEMT 332
>gi|188528692|ref|NP_004196.4| ubiquitin carboxyl-terminal hydrolase 2 isoform a [Homo sapiens]
gi|20141855|sp|O75604.2|UBP2_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|12804005|gb|AAH02854.1| Ubiquitin specific peptidase 2 [Homo sapiens]
gi|12804195|gb|AAH02955.1| Ubiquitin specific peptidase 2 [Homo sapiens]
gi|119587889|gb|EAW67485.1| ubiquitin specific peptidase 2, isoform CRA_b [Homo sapiens]
gi|123983451|gb|ABM83458.1| ubiquitin specific peptidase 2 [synthetic construct]
gi|167887743|gb|ACA06097.1| ubiquitin carboxyl-terminal hydrolase 2 variant 1 [Homo sapiens]
Length = 605
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 164/341 (48%), Gaps = 30/341 (8%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCL-KLQHSSLCKQLTGDSALDAERKRECPFCIL 86
GLRNLGN+C++NS+LQCL+ T L ++CL +L L +AL E F L
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEE------FAKL 321
Query: 87 EKRIVRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCLRLKKL 146
+ I S D+ +P++ ++ ++ +A F Q+DA EFLR+++D HN R+ L
Sbjct: 322 IQTIWTSSPNDVV--SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRV-TL 378
Query: 147 RRKGGGSS---------GGGGGGETINGGSSVVKEIFGGALQSQVKCLACGAESNKVDEI 197
R K + G + + S + ++F G L+S + C CG S D
Sbjct: 379 RPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPF 438
Query: 198 MDISLDILN----SCSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPNIL 253
D+SL I +L + M+ F + +VLDG+ K C C+ K+ SI + P IL
Sbjct: 439 WDLSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKIL 498
Query: 254 VIQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDS 310
V+ LKRF I K+ + F L L F + + Y L+ HSG +
Sbjct: 499 VLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTN--HAVYNLYAVSNHSG-TTMG 555
Query: 311 GHYYAYIKD-AIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
GHY AY + G W+ NDS V+ + +V + Y+LF+
Sbjct: 556 GHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFY 596
>gi|313242252|emb|CBY34415.1| unnamed protein product [Oikopleura dioica]
Length = 927
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 163/344 (47%), Gaps = 38/344 (11%)
Query: 28 GLRNLGNSCYLNSVLQCLTYTPPLANFCLKLQHSSLC--KQLTGDSALDAERKRECPFCI 85
GL+NLGN+CY+NS++Q L PL L ++ + K G L AE F +
Sbjct: 586 GLKNLGNTCYMNSIIQSLGSLAPLVEKFLTDKYRADINKKNFLGHKGLVAEH-----FAV 640
Query: 86 LEKRI----VRSLSVDLTLDAPAKIQSCLRIFAEHFKCGRQEDAHEFLRYVIDACHNTCL 141
+ K + ++ + +A + SC IF + +Q+DA E L +++D H
Sbjct: 641 VAKGLWHGGFKNFQPRMFKEA---LASCNPIFGNY----KQQDAQELLIFLLDGLHEDLN 693
Query: 142 RLKKLR----RKGGGSSGGGGGGETINGGS----SVVKEIFGGALQSQVKCLACGAESNK 193
++K R + G E+ + S++ ++F G ++ +KCL+C S K
Sbjct: 694 KVKDRRYIEEKDADGRPDQLVADESWENHTRLNKSIIVDLFQGQFKATIKCLSCKFTSVK 753
Query: 194 VDEIMDISLDILNS--CSLKEAMQKFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQSPN 251
D M +SL I S +L+ + F Q E L G++++ C CK+ A + + + + P
Sbjct: 754 FDAFMFLSLPIPTSGKATLESCLNLFQQTEKLTGDDRWTCPKCKRARDAERTLRLWRMPT 813
Query: 252 ILVIQLKRF--EGIFGGKIDKAIAFEEVLVLSSFMCKAS---QDPQPEYKLFGTIVHSGF 306
+L+I LKRF +G + K+ I++ + F K + QP Y L H G
Sbjct: 814 LLIIHLKRFKSDGRWKSKVSTNISYP----TTGFDLKPQTLGKKKQPPYNLIAVTHHIGA 869
Query: 307 SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 350
S DSGHY A + A G W +D+ V+ + + +S YILF+
Sbjct: 870 STDSGHYVASCRRAKG-WVKADDAEVTAISESKAISPTAYILFY 912
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,786,179,057
Number of Sequences: 23463169
Number of extensions: 417446868
Number of successful extensions: 2026605
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5516
Number of HSP's successfully gapped in prelim test: 2668
Number of HSP's that attempted gapping in prelim test: 1995356
Number of HSP's gapped (non-prelim): 18796
length of query: 618
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 469
effective length of database: 8,863,183,186
effective search space: 4156832914234
effective search space used: 4156832914234
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 80 (35.4 bits)