Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>007095
MAPGLVSSLQNLWPFSFFKYDDLRASKELVNRLSIPEHTKEFVFAIREPKSQSVIYILCA
QNLSERSAIDTECLIREVRPDAVVAQVGVLSEVQCEESELGDNGNDPLPTSSFGVLKRCF
VDKVNKETYENVAGNLVLREIFGIGFHGHLFAAKRVAKEVGSSFMVVESRIVRNSIPDNP
SGEVDVMNKVQGLVSSLVPQKVGFVVSSRSRSFRITNDIESQMVKLLSSNLDFLGSRFSG
SKEVQPRSSYHVPSFAQSVYPLLVDLHDVFIDLPSITRALAFAQKMFYDVNRGEAVDTEV
ISEVCTFRIAVEGLRIALNNASRLPINKLRDSNLSNIDFSELALEDKSSALLAQALQNQA
KKFKTVVAVVDASCLAGLRKHWNTPLPHEVEDLVGQLVTSCGDDDENSNLNRKWLLSSKP
VVAVGAGASAVVGASSLSKVLPASTFMKVVSFKAPASLKLIMTQTQKAVAIALGKTKVVA
PGLVTSGSNTSPILKAAASAEKIRTVTHSVIASMEKTSFSAMRTAFYEIMRKRRVKPIGV
LPWATFGCSVATCSGLLMYGDGIECVAESLPAAPSIASLGRGIQSLHLASQAVTQTNGTR
IQKSIETLMHNLKRVKVQ

High Scoring Gene Products

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  007095
        (618 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2040986 - symbol:AT2G43250 species:3702 "Arabi...  1632  8.5e-168  1


>TAIR|locus:2040986 [details] [associations]
            symbol:AT2G43250 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM] EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC004450 EMBL:AK228887
            IPI:IPI00540532 PIR:H84863 RefSeq:NP_181854.1 UniGene:At.36915
            PaxDb:Q9ZW70 PRIDE:Q9ZW70 EnsemblPlants:AT2G43250.1 GeneID:818926
            KEGG:ath:AT2G43250 TAIR:At2g43250 eggNOG:NOG282804
            HOGENOM:HOG000240878 InParanoid:Q9ZW70 OMA:DGIECAA PhylomeDB:Q9ZW70
            ProtClustDB:CLSN2683065 ArrayExpress:Q9ZW70 Genevestigator:Q9ZW70
            Uniprot:Q9ZW70
        Length = 625

 Score = 1632 (579.6 bits), Expect = 8.5e-168, P = 8.5e-168
 Identities = 345/623 (55%), Positives = 431/623 (69%)

Query:     7 SSLQNLWPFSFFKYDDLRASKELVNRLSIPEHTKEFVFAIREPKSQSVIYILCAQNLSER 66
             +SLQN+WPFS F+  DL+ SKELV+RLS+PE TK FVFAIR P+  S IYIL AQNLSER
Sbjct:     8 NSLQNIWPFSIFQNSDLKESKELVHRLSLPESTKNFVFAIRVPEHDSTIYILAAQNLSER 67

Query:    67 SAIDTECLIREVRPDAVVAQV--GVLSEVQCEESELGDNGNDPLPTSSFGVLKRCFVDKV 124
             SA D ECLIRE+RP AVVAQV      E Q EES LG+  +D +PTS+F VL +CFVDKV
Sbjct:    68 SASDAECLIREIRPGAVVAQVDKSAFGEAQVEESVLGNGISDSIPTSAFKVLIQCFVDKV 127

Query:   125 NKETYENVAGNLVLREIFGIGFHGHLFAAKRVAKEVGSSFMVVESRIVRNSIPDNPSGEV 184
             NKE YE++AG +VLREIFG  F+GHL AAKRVA EVGSSFMV+ES  V  +  ++  G  
Sbjct:   128 NKEKYESIAGIVVLREIFGTSFNGHLLAAKRVAGEVGSSFMVLESPFVDIAAVEDAGG-- 185

Query:   185 DVMNKVQGLVSSLVPQKVGXXXXXXXXXXXITNDIESQMVKLLSSNLDFLGSRFSGSKEV 244
                 K+Q L +SLVPQ  G           ITND++++M+KL+S  ++ +  + S S  V
Sbjct:   186 ----KMQSLANSLVPQLNGSAIFSSSRRFLITNDVQARMLKLISLQMNQVNKKLSPSSSV 241

Query:   245 ------QPRS-SYHVPSFAQSVYPLLVDLHDVFIDLPSITRALAFAQKMFYDVNRGEAVD 297
                   + +S S+ VP FAQ++YPLLVDLHD+F DLPSI +ALA A++M  DVNRGE++D
Sbjct:   242 ASGISSEIQSCSHEVPPFAQTIYPLLVDLHDIFSDLPSIGKALANARRMLSDVNRGESMD 301

Query:   298 TEVISEVCTFRIAVEGLRIALNNASRLPINKLRDSNLSNIDFSELALEDKSSXXXXXXXX 357
             TEVISEV  F+IAVEGLRIALNNA RLPI  +  S+ + + FS+L+ EDKS         
Sbjct:   302 TEVISEVYLFQIAVEGLRIALNNAGRLPIKNMGSSSRTEVQFSQLSSEDKSYALMADLLR 361

Query:   358 XXXKKFKTVVAVVDASCLAGLRKHWNTPLPHEVEDLVGQLVTSCGDDDENSNLNRKWLLS 417
                KKFK +VA+VDA  LAGLRKHW T +P EV+D+   ++    +D++ ++   K LLS
Sbjct:   362 NQAKKFKNIVAIVDACSLAGLRKHWKTCVPQEVKDMSEYMLQDFDNDEKTNDSKLKRLLS 421

Query:   418 SKPXXXXXXXXXXXXXXXXLSKVLPASTFMKVVSFKAPASLKLIMTQTQKAVAIALGK-- 475
              KP                LSK + AS F K+V+FK P SL L +T T KAV  A  K  
Sbjct:   422 DKPVVAVGAGATAIWGASSLSKAISASPFFKIVTFKVPGSLNLFLTHTHKAVTFAFTKVA 481

Query:   476 --TKVVAPGLVTSGSNTSPILKAAASAEKIRTVTHSVIASMEKTSFSAMRTAFYEIMRKR 533
               +K +APG  +SG+ ++ ++KA+ SAEKIR VTHS+IAS+EKTS SAMRTAFYEIMRKR
Sbjct:   482 VPSKAMAPGFASSGAKSTSLVKASLSAEKIRAVTHSIIASVEKTSLSAMRTAFYEIMRKR 541

Query:   534 RVKPIGVLPWATFGCSVATCSGLLMYGDGIECVAESLPAAPSIASLGRGIQSLHLASQAV 593
             R KPIG LP  TFG S+ATC+GL  YGDGIEC A SLP+APSIA+LGRGIQ+LH AS  V
Sbjct:   542 RAKPIGTLPLVTFGASLATCAGLFAYGDGIECAAMSLPSAPSIANLGRGIQNLHEASLEV 601

Query:   594 TQTNGTRIQKSIETLMHNLKRVK 616
                 G RIQ +IE+L   LK+VK
Sbjct:   602 RMREGNRIQNAIESLRQRLKKVK 624


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.132   0.372    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      618       580   0.00081  120 3  11 22  0.40    34
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  614 (65 KB)
  Total size of DFA:  284 KB (2150 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  43.97u 0.15s 44.12t   Elapsed:  00:00:03
  Total cpu time:  43.97u 0.15s 44.12t   Elapsed:  00:00:03
  Start:  Mon May 20 23:50:30 2013   End:  Mon May 20 23:50:33 2013

Back to top