Query 007095
Match_columns 618
No_of_seqs 20 out of 22
Neff 2.7
Searched_HMMs 13730
Date Mon Mar 25 17:02:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007095.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/007095hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2gv8a2 c.3.1.5 (A:181-287) Fl 59.1 1.3 9.7E-05 34.9 1.0 24 416-439 30-53 (107)
2 d1nvta1 c.2.1.7 (A:111-287) Sh 53.0 1.8 0.00013 36.7 0.8 24 416-439 16-39 (177)
3 d1w4xa2 c.3.1.5 (A:155-389) Ph 48.4 2.1 0.00016 35.6 0.5 16 416-431 30-45 (235)
4 d1nyta1 c.2.1.7 (A:102-271) Sh 42.9 3.2 0.00023 34.9 0.8 16 416-431 16-31 (170)
5 d1vmea1 c.23.5.1 (A:251-398) R 39.6 16 0.0012 29.3 4.7 65 350-428 18-100 (148)
6 d1fcda1 c.3.1.5 (A:1-114,A:256 39.2 3.6 0.00026 32.1 0.5 25 417-441 1-25 (186)
7 d1trba2 c.3.1.5 (A:119-244) Th 39.0 2.9 0.00021 34.1 -0.1 29 414-442 23-51 (126)
8 d1q1ra1 c.3.1.5 (A:2-114,A:248 38.6 3.7 0.00027 33.0 0.5 30 417-446 2-31 (185)
9 d1vdca2 c.3.1.5 (A:118-243) Th 37.9 2.9 0.00021 34.7 -0.2 29 414-442 30-58 (130)
10 d1npya1 c.2.1.7 (A:103-269) Sh 33.6 6.6 0.00048 33.0 1.3 16 417-432 16-31 (167)
11 d1d7ya1 c.3.1.5 (A:5-115,A:237 33.1 5.6 0.00041 32.5 0.8 23 418-440 3-25 (183)
12 d1ycga1 c.23.5.1 (A:251-399) N 33.0 35 0.0026 27.1 5.7 63 350-426 17-94 (149)
13 d1p77a1 c.2.1.7 (A:102-272) Sh 32.3 5.9 0.00043 33.6 0.8 23 416-438 16-38 (171)
14 d1vi2a1 c.2.1.7 (A:107-288) Pu 30.6 6.6 0.00048 33.2 0.8 25 416-440 16-40 (182)
15 d1fl2a2 c.3.1.5 (A:326-451) Al 30.3 4.3 0.00032 33.1 -0.4 29 414-442 26-54 (126)
16 d1w1oa1 d.58.32.4 (A:246-534) 27.7 12 0.00086 35.8 2.1 130 9-179 53-196 (289)
17 d1pjqa1 c.2.1.11 (A:1-113) Sir 25.9 9 0.00065 30.0 0.8 24 416-439 10-33 (113)
18 d1e5da1 c.23.5.1 (A:251-402) R 25.2 60 0.0044 25.7 5.9 64 350-427 17-95 (152)
19 d2ez9a1 c.31.1.3 (A:183-365) P 21.4 21 0.0015 30.4 2.4 12 417-428 30-41 (183)
20 d1kyqa1 c.2.1.11 (A:1-150) Bif 20.7 11 0.00084 30.5 0.4 25 416-440 11-35 (150)
No 1
>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Probab=59.10 E-value=1.3 Score=34.92 Aligned_cols=24 Identities=25% Similarity=0.281 Sum_probs=17.8
Q ss_pred cCCCCeEEEcCcceeeeccccccc
Q 007095 416 LSSKPVVAVGAGASAVVGASSLSK 439 (618)
Q Consensus 416 ~~~kpvVaVGAGAtAvlGaSSLsk 439 (618)
+.+|.|++||+|++|+==+.-|++
T Consensus 30 f~gK~VlVVG~g~Sa~dia~~l~~ 53 (107)
T d2gv8a2 30 FVGESVLVVGGASSANDLVRHLTP 53 (107)
T ss_dssp GTTCCEEEECSSHHHHHHHHHHTT
T ss_pred cCCCeEEEECCCCCHHHHHHHHHH
Confidence 588999999999998654444443
No 2
>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=52.98 E-value=1.8 Score=36.69 Aligned_cols=24 Identities=38% Similarity=0.443 Sum_probs=17.8
Q ss_pred cCCCCeEEEcCcceeeeccccccc
Q 007095 416 LSSKPVVAVGAGASAVVGASSLSK 439 (618)
Q Consensus 416 ~~~kpvVaVGAGAtAvlGaSSLsk 439 (618)
+.+|+|+++|||+||=.=+-.|.+
T Consensus 16 ~~~k~vlIlGaGG~arai~~aL~~ 39 (177)
T d1nvta1 16 VKDKNIVIYGAGGAARAVAFELAK 39 (177)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHTS
T ss_pred cCCCEEEEECCcHHHHHHHHHHcc
Confidence 689999999999987533344444
No 3
>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}
Probab=48.39 E-value=2.1 Score=35.56 Aligned_cols=16 Identities=31% Similarity=0.609 Sum_probs=14.0
Q ss_pred cCCCCeEEEcCcceee
Q 007095 416 LSSKPVVAVGAGASAV 431 (618)
Q Consensus 416 ~~~kpvVaVGAGAtAv 431 (618)
+.+|.|++||+|.||+
T Consensus 30 ~~gK~V~VvG~G~Sa~ 45 (235)
T d1w4xa2 30 FSGQRVGVIGTGSSGI 45 (235)
T ss_dssp CBTCEEEEECCSHHHH
T ss_pred CCCCEEEEECCCccHH
Confidence 5788999999998875
No 4
>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}
Probab=42.92 E-value=3.2 Score=34.90 Aligned_cols=16 Identities=19% Similarity=0.391 Sum_probs=13.6
Q ss_pred cCCCCeEEEcCcceee
Q 007095 416 LSSKPVVAVGAGASAV 431 (618)
Q Consensus 416 ~~~kpvVaVGAGAtAv 431 (618)
+.+|.|+++|||+||=
T Consensus 16 ~~~k~vlIlGaGGaar 31 (170)
T d1nyta1 16 RPGLRILLIGAGGASR 31 (170)
T ss_dssp CTTCEEEEECCSHHHH
T ss_pred CCCCEEEEECCcHHHH
Confidence 4789999999999863
No 5
>d1vmea1 c.23.5.1 (A:251-398) ROO-like flavoprotein TM0755, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=39.64 E-value=16 Score=29.27 Aligned_cols=65 Identities=11% Similarity=0.021 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHhcCcEEEEEecchhh---------hhh---------hhcCCCCChhHHHhhhhhccccCCCCCCCccc
Q 007095 350 ALLAQALQNQAKKFKTVVAVVDASCLA---------GLR---------KHWNTPLPHEVEDLVGQLVTSCGDDDENSNLN 411 (618)
Q Consensus 350 aLlaQALqsQ~r~fktVVAVVDaS~lA---------GiR---------khWnTpvP~Ev~~l~~~~~~~~d~d~~~~~~d 411 (618)
--+|++|++++.+.|--|.++|....- -|. =-|+.-+||++++..+++
T Consensus 18 e~~A~~i~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~d~iiigspt~~~~~~~~~~~~l~~~-------------- 83 (148)
T d1vmea1 18 ENVMKKAIDSLKEKGFTPVVYKFSDEERPAISEILKDIPDSEALIFGVSTYEAEIHPLMRFTLLEI-------------- 83 (148)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECSSCCCCHHHHHHHSTTCSEEEEEECEETTEECHHHHHHHHHH--------------
T ss_pred HHHHHHHHHHHHhCCCeEEEEecccccccchhHhhhhHHHCCEeEEEecccCCccCchHHHHHHHH--------------
Confidence 458999999999999888888754322 111 126666777777766655
Q ss_pred cccccCCCCeEEEcCcc
Q 007095 412 RKWLLSSKPVVAVGAGA 428 (618)
Q Consensus 412 kk~~~~~kpvVaVGAGA 428 (618)
+...+.+|++++.|.++
T Consensus 84 ~~~~~~~k~~~~fgs~g 100 (148)
T d1vmea1 84 IDKANYEKPVLVFGVHG 100 (148)
T ss_dssp HHHCCCCCEEEEEEECC
T ss_pred hhcccCCCEEEEEEcCC
Confidence 12346899999999754
No 6
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}
Probab=39.18 E-value=3.6 Score=32.10 Aligned_cols=25 Identities=24% Similarity=0.364 Sum_probs=19.7
Q ss_pred CCCCeEEEcCcceeeeccccccccc
Q 007095 417 SSKPVVAVGAGASAVVGASSLSKVL 441 (618)
Q Consensus 417 ~~kpvVaVGAGAtAvlGaSSLsk~v 441 (618)
+.|.||+||||.+.+-=|..|.+..
T Consensus 1 ~gkrivIvGgG~~G~e~A~~l~~~~ 25 (186)
T d1fcda1 1 AGRKVVVVGGGTGGATAAKYIKLAD 25 (186)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHC
T ss_pred CCCcEEEECccHHHHHHHHHHHHcC
Confidence 4688999999999887777775543
No 7
>d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]}
Probab=38.96 E-value=2.9 Score=34.13 Aligned_cols=29 Identities=28% Similarity=0.456 Sum_probs=25.1
Q ss_pred cccCCCCeEEEcCcceeeecccccccccc
Q 007095 414 WLLSSKPVVAVGAGASAVVGASSLSKVLP 442 (618)
Q Consensus 414 ~~~~~kpvVaVGAGAtAvlGaSSLsk~v~ 442 (618)
.++.+|+|++||.|-.|+=-|-.|+++..
T Consensus 23 ~~~~~k~V~VvGgGdsA~e~A~~L~~~a~ 51 (126)
T d1trba2 23 FFYRNQKVAVIGGGNTAVEEALYLSNIAS 51 (126)
T ss_dssp GGGTTSEEEEECSSHHHHHHHHHHTTTSS
T ss_pred HHhCCCEEEEECCCHHHHHHHHHHhhcCC
Confidence 45689999999999999999998988743
No 8
>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}
Probab=38.63 E-value=3.7 Score=32.97 Aligned_cols=30 Identities=27% Similarity=0.205 Sum_probs=22.2
Q ss_pred CCCCeEEEcCcceeeecccccccccccccc
Q 007095 417 SSKPVVAVGAGASAVVGASSLSKVLPASTF 446 (618)
Q Consensus 417 ~~kpvVaVGAGAtAvlGaSSLsk~v~aS~~ 446 (618)
+++.||+||+|.+++==+..|.+..+-.++
T Consensus 2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v~v 31 (185)
T d1q1ra1 2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNI 31 (185)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEE
T ss_pred CCCCEEEECCcHHHHHHHHHHHHcCCceEE
Confidence 467799999999998777777665443333
No 9
>d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=37.94 E-value=2.9 Score=34.72 Aligned_cols=29 Identities=31% Similarity=0.431 Sum_probs=25.4
Q ss_pred cccCCCCeEEEcCcceeeecccccccccc
Q 007095 414 WLLSSKPVVAVGAGASAVVGASSLSKVLP 442 (618)
Q Consensus 414 ~~~~~kpvVaVGAGAtAvlGaSSLsk~v~ 442 (618)
-++.+|+|++||.|-.|+=-|-.|++...
T Consensus 30 ~~frgk~V~VvGgGdsA~e~A~~L~~~a~ 58 (130)
T d1vdca2 30 PIFRNKPLAVIGGGDSAMEEANFLTKYGS 58 (130)
T ss_dssp GGGTTSEEEEECCSHHHHHHHHHHTTTSS
T ss_pred HHhCCCEEEEEcCchHHHHHHHHHhCCCC
Confidence 36789999999999999999998888754
No 10
>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}
Probab=33.64 E-value=6.6 Score=33.00 Aligned_cols=16 Identities=25% Similarity=0.393 Sum_probs=13.2
Q ss_pred CCCCeEEEcCcceeee
Q 007095 417 SSKPVVAVGAGASAVV 432 (618)
Q Consensus 417 ~~kpvVaVGAGAtAvl 432 (618)
.+|.|+++|||++|=.
T Consensus 16 ~~~~vlIlGaGGaara 31 (167)
T d1npya1 16 KNAKVIVHGSGGMAKA 31 (167)
T ss_dssp TTSCEEEECSSTTHHH
T ss_pred CCCeEEEECCCHHHHH
Confidence 5788999999988743
No 11
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Probab=33.06 E-value=5.6 Score=32.47 Aligned_cols=23 Identities=35% Similarity=0.531 Sum_probs=17.2
Q ss_pred CCCeEEEcCcceeeecccccccc
Q 007095 418 SKPVVAVGAGASAVVGASSLSKV 440 (618)
Q Consensus 418 ~kpvVaVGAGAtAvlGaSSLsk~ 440 (618)
.+|||+||+|.+++==|..|-+.
T Consensus 3 ~a~VvIIGgG~~G~e~A~~l~~~ 25 (183)
T d1d7ya1 3 KAPVVVLGAGLASVSFVAELRQA 25 (183)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhc
Confidence 46899999999988655555443
No 12
>d1ycga1 c.23.5.1 (A:251-399) Nitric oxide reductase C-terminal domain {Moorella thermoacetica [TaxId: 1525]}
Probab=32.98 E-value=35 Score=27.07 Aligned_cols=63 Identities=21% Similarity=0.106 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHhcCcEEEEEecchhh--hhh----h---------hcCCCCChhHHHhhhhhccccCCCCCCCcccccc
Q 007095 350 ALLAQALQNQAKKFKTVVAVVDASCLA--GLR----K---------HWNTPLPHEVEDLVGQLVTSCGDDDENSNLNRKW 414 (618)
Q Consensus 350 aLlaQALqsQ~r~fktVVAVVDaS~lA--GiR----k---------hWnTpvP~Ev~~l~~~~~~~~d~d~~~~~~dkk~ 414 (618)
-.+|+++++.+++.|.-|-++|.+..- .|. . -|+--+|+++++..+.+ +..
T Consensus 17 ~~vA~~Ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~d~ii~Gspt~~g~~~~~~~~~l~~l--------------~~~ 82 (149)
T d1ycga1 17 EKMAHALMDGLVAGGCEVKLFKLSVSDRNDVIKEILDARAVLVGSPTINNDILPVVSPLLDDL--------------VGL 82 (149)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEGGGSCHHHHHHHHHHCSEEEEECCCBTTBCCGGGHHHHHHH--------------HHH
T ss_pred HHHHHHHHHHHHhcCCeeEEEEccccchHHHhhhhhhCCeEEEEeecccCCCCHHHHHHHHHH--------------hcc
Confidence 468999999999999888888866321 111 1 25666777788777766 222
Q ss_pred ccCCCCeEEEcC
Q 007095 415 LLSSKPVVAVGA 426 (618)
Q Consensus 415 ~~~~kpvVaVGA 426 (618)
.+.+|++.+.|+
T Consensus 83 ~~~~k~~~~fgs 94 (149)
T d1ycga1 83 RPKNKVGLAFGA 94 (149)
T ss_dssp CCSSCEEEEEEE
T ss_pred ccCCCEEEEEec
Confidence 357899999886
No 13
>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}
Probab=32.35 E-value=5.9 Score=33.61 Aligned_cols=23 Identities=22% Similarity=0.208 Sum_probs=17.1
Q ss_pred cCCCCeEEEcCcceeeecccccc
Q 007095 416 LSSKPVVAVGAGASAVVGASSLS 438 (618)
Q Consensus 416 ~~~kpvVaVGAGAtAvlGaSSLs 438 (618)
+.+|.|+++|||+||-.=+.+|-
T Consensus 16 ~~~k~vlIlGaGGaarai~~aL~ 38 (171)
T d1p77a1 16 RPNQHVLILGAGGATKGVLLPLL 38 (171)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHH
T ss_pred CCCCEEEEECCcHHHHHHHHHHc
Confidence 47899999999998754444443
No 14
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}
Probab=30.62 E-value=6.6 Score=33.22 Aligned_cols=25 Identities=20% Similarity=0.276 Sum_probs=19.0
Q ss_pred cCCCCeEEEcCcceeeecccccccc
Q 007095 416 LSSKPVVAVGAGASAVVGASSLSKV 440 (618)
Q Consensus 416 ~~~kpvVaVGAGAtAvlGaSSLsk~ 440 (618)
+++|+|+++|||++|-.-+..|-+-
T Consensus 16 l~~k~vlIlGaGGaarai~~al~~~ 40 (182)
T d1vi2a1 16 IKGKTMVLLGAGGASTAIGAQGAIE 40 (182)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT
T ss_pred cCCCEEEEECCcHHHHHHHHHHhhc
Confidence 5789999999999886555555543
No 15
>d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}
Probab=30.32 E-value=4.3 Score=33.10 Aligned_cols=29 Identities=31% Similarity=0.439 Sum_probs=25.1
Q ss_pred cccCCCCeEEEcCcceeeecccccccccc
Q 007095 414 WLLSSKPVVAVGAGASAVVGASSLSKVLP 442 (618)
Q Consensus 414 ~~~~~kpvVaVGAGAtAvlGaSSLsk~v~ 442 (618)
.++.+|+|++||.|-+|+=-|-.|+++..
T Consensus 26 ~~~~gk~V~VvGgG~sA~~~A~~L~~~a~ 54 (126)
T d1fl2a2 26 PLFKGKRVAVIGGGNSGVEAAIDLAGIVE 54 (126)
T ss_dssp GGGBTCEEEEECCSHHHHHHHHHHHTTBS
T ss_pred hhcCCceEEEEeCCHHHHHHHHhhhccCC
Confidence 46789999999999999999988888743
No 16
>d1w1oa1 d.58.32.4 (A:246-534) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]}
Probab=27.74 E-value=12 Score=35.79 Aligned_cols=130 Identities=18% Similarity=0.290 Sum_probs=85.0
Q ss_pred hhhcCCCCCCCccchHHHHHHhhhcCCCccccceeEEeecCCCCceEEEe-eccccccccc------ccHHHHHHhhC--
Q 007095 9 LQNLWPFSFFKYDDLRASKELVNRLSIPEHTKEFVFAIREPKSQSVIYIL-CAQNLSERSA------IDTECLIREVR-- 79 (618)
Q Consensus 9 LqnlWp~s~~~~ddL~~S~~LV~kL~iPE~TkqFVfA~R~p~sqsviYiL-~aqnLSErSa------~Da~~LIr~ir-- 79 (618)
.+|.|+-+.|...|......+..+ ...+++|.| .+.+..+... -|.+.|++.-+
T Consensus 53 ~~~~~~s~~f~~~~~~~~~~~~~~-----------------~~g~~lY~LE~ak~yd~~~~~~~~~d~~~~~lL~~L~~~ 115 (289)
T d1w1oa1 53 ATDLANTGFFTDADVARIVALAGE-----------------RNATTVYSIEATLNYDNATAAAAAVDQELASVLGTLSYV 115 (289)
T ss_dssp HHHHHTTSSSCHHHHHHHHHHHHH-----------------TTCSEEEEEEEEEEC-------CHHHHHHHHHHTTCCCC
T ss_pred ccCCcccccCCccccchhhhhccc-----------------cCCceEEEEEEEEEecCCCCccchhhHHHHHHHhhcCCC
Confidence 467787777777776665555533 235789988 6777755332 25678998887
Q ss_pred cCeEEEe-ec---cccchhhhhhhcCCCCCCCCCCChhhhhHhhhcccccchhhhhhhHHHHHHHHh-ccccchhhHHHh
Q 007095 80 PDAVVAQ-VG---VLSEVQCEESELGDNGNDPLPTSSFGVLKRCFVDKVNKETYENVAGNLVLREIF-GIGFHGHLFAAK 154 (618)
Q Consensus 80 P~AVvaQ-v~---~~~~~~~EE~~l~~~~~~~VPtSsF~Vikrcf~dk~~k~~ye~~Ag~~VLreIF-Gtgf~Gh~LAAK 154 (618)
|..+.++ |. =++-++.+|..|-..|-=.||--=+. ||+-++....|. ..|++.|. ++|+.|++|
T Consensus 116 ~~~~f~~Dv~Y~dFL~Rv~~~E~~Lrs~GlW~vPHPWlN----lfvP~s~I~~F~----~~Vf~~il~~~~~~GpiL--- 184 (289)
T d1w1oa1 116 EGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLN----MFVPRSRIADFD----RGVFKGILQGTDIVGPLI--- 184 (289)
T ss_dssp TTCEEEEEEEHHHHHTHHHHHHHHHHHTTCSSSCCCCEE----EEEEGGGHHHHH----HHHTTTTTTTSCCCSCEE---
T ss_pred CCcceeccCCHHHHHHHhhhhHHHHHhcCCCCCCCcceE----EecchhHHHHHH----HHHHHhhccccCCCCeEE---
Confidence 3444333 32 45667788888875555568888888 999988887773 24555555 478899765
Q ss_pred HHHHHhCCeeEEEeecccccCCCCC
Q 007095 155 RVAKEVGSSFMVVESRIVRNSIPDN 179 (618)
Q Consensus 155 raA~evgS~Fl~lesp~~~~~~~~~ 179 (618)
-+|..++-+..+
T Consensus 185 -------------vYP~~~~kwd~~ 196 (289)
T d1w1oa1 185 -------------VYPLNKSMWDDG 196 (289)
T ss_dssp -------------EEEEEGGGSCTT
T ss_pred -------------EEEccccccCCC
Confidence 688888766555
No 17
>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}
Probab=25.95 E-value=9 Score=29.98 Aligned_cols=24 Identities=29% Similarity=0.331 Sum_probs=17.5
Q ss_pred cCCCCeEEEcCcceeeeccccccc
Q 007095 416 LSSKPVVAVGAGASAVVGASSLSK 439 (618)
Q Consensus 416 ~~~kpvVaVGAGAtAvlGaSSLsk 439 (618)
+++|+|++||+|..|.-=+-.|.+
T Consensus 10 l~~k~vlVvG~G~va~~ka~~ll~ 33 (113)
T d1pjqa1 10 LRDRDCLIVGGGDVAERKARLLLE 33 (113)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHH
T ss_pred eCCCEEEEECCCHHHHHHHHHHHH
Confidence 478999999999977644444443
No 18
>d1e5da1 c.23.5.1 (A:251-402) Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain {Desulfovibrio gigas [TaxId: 879]}
Probab=25.23 E-value=60 Score=25.69 Aligned_cols=64 Identities=13% Similarity=0.045 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHhcCcEEEEEecchh------hhhhh---------hcCCCCChhHHHhhhhhccccCCCCCCCcccccc
Q 007095 350 ALLAQALQNQAKKFKTVVAVVDASCL------AGLRK---------HWNTPLPHEVEDLVGQLVTSCGDDDENSNLNRKW 414 (618)
Q Consensus 350 aLlaQALqsQ~r~fktVVAVVDaS~l------AGiRk---------hWnTpvP~Ev~~l~~~~~~~~d~d~~~~~~dkk~ 414 (618)
-.+|+++.+++.+-|--|-++|.+.- .-|.. -|+--+|+++++..+.+ +..
T Consensus 17 e~~A~~Ia~~l~~~g~ev~~~~~~~~~~~~~~~~l~~~d~vi~Gspt~~~~~~~~~~~~l~~~--------------~~~ 82 (152)
T d1e5da1 17 EKMARVLAESFRDEGCTVKLMWCKACHHSQIMSEISDAGAVIVGSPTHNNGILPYVAGTLQYI--------------KGL 82 (152)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEETTTSCHHHHHHHHHTCSEEEEECCCBTTBCCHHHHHHHHHH--------------HHT
T ss_pred HHHHHHHHHHHhhCCCEEEEeecccCChhhhccchhhCCEEEEeccccCCccCchhHHHHHHh--------------hcc
Confidence 46899999999999988888887531 11111 25556667777777655 112
Q ss_pred ccCCCCeEEEcCc
Q 007095 415 LLSSKPVVAVGAG 427 (618)
Q Consensus 415 ~~~~kpvVaVGAG 427 (618)
.+.+|++.+.|.+
T Consensus 83 ~~~~k~~~~fgs~ 95 (152)
T d1e5da1 83 RPQNKIGGAFGSF 95 (152)
T ss_dssp CCCSCEEEEEEEE
T ss_pred CCCCCEEEEEEee
Confidence 3578999999864
No 19
>d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]}
Probab=21.39 E-value=21 Score=30.38 Aligned_cols=12 Identities=33% Similarity=0.778 Sum_probs=10.9
Q ss_pred CCCCeEEEcCcc
Q 007095 417 SSKPVVAVGAGA 428 (618)
Q Consensus 417 ~~kpvVaVGAGA 428 (618)
+++|++++|.|+
T Consensus 30 A~rPvii~G~G~ 41 (183)
T d2ez9a1 30 AERPLIYYGIGA 41 (183)
T ss_dssp CSSEEEEECGGG
T ss_pred CCCeEEEEcCCc
Confidence 889999999886
No 20
>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.68 E-value=11 Score=30.50 Aligned_cols=25 Identities=20% Similarity=0.357 Sum_probs=18.3
Q ss_pred cCCCCeEEEcCcceeeecccccccc
Q 007095 416 LSSKPVVAVGAGASAVVGASSLSKV 440 (618)
Q Consensus 416 ~~~kpvVaVGAGAtAvlGaSSLsk~ 440 (618)
+++|.||+||+|..|.-=+.+|.+.
T Consensus 11 l~gkrvLViGgG~va~~ka~~Ll~~ 35 (150)
T d1kyqa1 11 LKDKRILLIGGGEVGLTRLYKLMPT 35 (150)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGG
T ss_pred eCCCEEEEECCCHHHHHHHHHHHHC
Confidence 5899999999998775555544443
Done!