Query 007107
Match_columns 618
No_of_seqs 636 out of 4717
Neff 9.4
Searched_HMMs 46136
Date Thu Mar 28 19:01:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007107.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007107hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 5.1E-57 1.1E-61 530.3 36.3 465 83-617 404-879 (968)
2 KOG0595 Serine/threonine-prote 100.0 2.1E-46 4.5E-51 365.5 17.8 202 408-618 8-216 (429)
3 KOG1187 Serine/threonine prote 100.0 1.6E-44 3.4E-49 370.8 20.0 218 396-617 61-279 (361)
4 KOG0598 Ribosomal protein S6 k 100.0 9.1E-44 2E-48 344.3 15.7 202 408-617 23-226 (357)
5 KOG0591 NIMA (never in mitosis 100.0 1.8E-44 3.9E-49 334.4 6.3 207 409-617 18-229 (375)
6 KOG0192 Tyrosine kinase specif 100.0 1.2E-42 2.6E-47 354.0 18.4 202 411-618 42-248 (362)
7 KOG0581 Mitogen-activated prot 100.0 7.6E-43 1.6E-47 338.0 15.6 197 411-617 80-278 (364)
8 KOG0615 Serine/threonine prote 100.0 3.8E-43 8.2E-48 342.0 10.9 202 408-618 170-383 (475)
9 KOG0575 Polo-like serine/threo 100.0 3.4E-42 7.3E-47 352.1 17.7 201 410-618 18-220 (592)
10 KOG0616 cAMP-dependent protein 100.0 1.9E-41 4.1E-46 316.9 15.5 198 409-617 43-242 (355)
11 KOG0593 Predicted protein kina 100.0 1.1E-41 2.4E-46 318.9 12.3 199 410-616 2-202 (396)
12 KOG0600 Cdc2-related protein k 100.0 3E-41 6.6E-46 336.6 14.7 205 406-617 113-321 (560)
13 KOG0197 Tyrosine kinases [Sign 100.0 4.3E-41 9.4E-46 340.8 13.2 202 408-617 204-406 (468)
14 KOG0597 Serine-threonine prote 100.0 1.2E-40 2.6E-45 334.9 13.2 198 410-616 2-200 (808)
15 KOG0659 Cdk activating kinase 100.0 4.7E-40 1E-44 303.2 14.9 199 410-616 2-202 (318)
16 KOG1026 Nerve growth factor re 100.0 7.7E-40 1.7E-44 347.5 17.4 206 408-617 484-707 (774)
17 KOG0592 3-phosphoinositide-dep 100.0 5.1E-40 1.1E-44 330.5 14.0 205 407-618 70-289 (604)
18 KOG0605 NDR and related serine 100.0 2.2E-39 4.8E-44 326.3 16.7 203 408-617 139-389 (550)
19 KOG0583 Serine/threonine prote 100.0 1.5E-38 3.2E-43 327.3 18.1 204 407-618 14-225 (370)
20 KOG1094 Discoidin domain recep 100.0 3.2E-38 6.9E-43 318.6 18.3 207 405-617 533-742 (807)
21 KOG0661 MAPK related serine/th 100.0 3.9E-39 8.5E-44 319.3 10.0 198 409-616 9-210 (538)
22 KOG0694 Serine/threonine prote 100.0 2.4E-38 5.2E-43 327.4 16.2 202 407-617 365-569 (694)
23 KOG0578 p21-activated serine/t 100.0 1.4E-38 3E-43 323.1 13.5 198 408-616 271-469 (550)
24 KOG0580 Serine/threonine prote 100.0 1.1E-38 2.5E-43 289.9 10.5 203 407-617 19-223 (281)
25 KOG0611 Predicted serine/threo 100.0 1.8E-38 3.9E-43 307.4 12.5 202 408-618 51-255 (668)
26 KOG0582 Ste20-like serine/thre 100.0 8.5E-38 1.8E-42 307.5 17.3 205 408-618 24-234 (516)
27 KOG0198 MEKK and related serin 100.0 3.8E-38 8.3E-43 311.1 13.3 201 409-617 16-223 (313)
28 KOG0588 Serine/threonine prote 100.0 5.1E-38 1.1E-42 322.3 13.6 200 410-618 12-214 (786)
29 KOG0663 Protein kinase PITSLRE 100.0 5.4E-38 1.2E-42 298.1 12.3 202 408-617 74-279 (419)
30 KOG4721 Serine/threonine prote 100.0 2E-38 4.3E-43 318.8 9.6 190 410-618 124-313 (904)
31 cd05628 STKc_NDR1 Catalytic do 100.0 7.7E-37 1.7E-41 319.7 18.8 201 410-617 1-237 (363)
32 KOG0196 Tyrosine kinase, EPH ( 100.0 7E-38 1.5E-42 325.9 10.2 201 409-616 628-835 (996)
33 KOG0193 Serine/threonine prote 100.0 1.7E-36 3.6E-41 308.8 20.0 207 402-617 384-594 (678)
34 cd05621 STKc_ROCK2 Catalytic d 100.0 9.7E-37 2.1E-41 318.9 16.9 205 405-617 38-248 (370)
35 cd05612 STKc_PRKX_like Catalyt 100.0 1.8E-36 3.9E-41 307.2 17.4 197 410-617 1-199 (291)
36 KOG0594 Protein kinase PCTAIRE 100.0 1.2E-36 2.6E-41 295.0 15.3 204 409-617 10-222 (323)
37 KOG0658 Glycogen synthase kina 100.0 9.8E-38 2.1E-42 301.7 7.5 198 408-617 22-227 (364)
38 cd05626 STKc_LATS2 Catalytic d 100.0 2.1E-36 4.6E-41 318.4 18.2 200 411-617 2-249 (381)
39 KOG3653 Transforming growth fa 100.0 9.7E-36 2.1E-40 295.0 21.4 192 412-614 212-422 (534)
40 cd05629 STKc_NDR_like_fungal C 100.0 2E-36 4.3E-41 318.3 17.1 201 410-617 1-249 (377)
41 PTZ00263 protein kinase A cata 100.0 2.3E-36 5.1E-41 311.6 17.2 198 409-617 17-216 (329)
42 cd05599 STKc_NDR_like Catalyti 100.0 2.2E-36 4.8E-41 316.7 17.0 201 410-617 1-240 (364)
43 cd05625 STKc_LATS1 Catalytic d 100.0 2.9E-36 6.2E-41 317.7 17.9 200 411-617 2-249 (382)
44 KOG0585 Ca2+/calmodulin-depend 100.0 1.7E-36 3.7E-41 300.1 14.9 206 405-617 92-320 (576)
45 cd05622 STKc_ROCK1 Catalytic d 100.0 2.9E-36 6.3E-41 315.6 17.7 206 404-617 37-248 (371)
46 PTZ00426 cAMP-dependent protei 100.0 2.9E-36 6.4E-41 311.7 17.2 199 408-617 28-229 (340)
47 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.4E-36 7.4E-41 311.2 17.7 197 410-617 1-199 (333)
48 cd05571 STKc_PKB Catalytic dom 100.0 4.1E-36 8.9E-41 309.1 17.9 194 416-617 1-196 (323)
49 cd05631 STKc_GRK4 Catalytic do 100.0 7.1E-36 1.5E-40 301.9 19.3 199 412-617 2-202 (285)
50 cd05598 STKc_LATS Catalytic do 100.0 2.1E-36 4.6E-41 318.1 15.7 200 411-617 2-245 (376)
51 KOG0610 Putative serine/threon 100.0 5.4E-36 1.2E-40 292.6 17.1 203 410-617 77-336 (459)
52 cd07848 STKc_CDKL5 Catalytic d 100.0 6.7E-36 1.4E-40 302.4 18.5 201 410-617 1-202 (287)
53 cd05102 PTKc_VEGFR3 Catalytic 100.0 7.6E-36 1.6E-40 309.4 18.2 207 407-617 4-278 (338)
54 cd05596 STKc_ROCK Catalytic do 100.0 5E-36 1.1E-40 313.8 16.8 203 407-617 40-248 (370)
55 KOG0201 Serine/threonine prote 100.0 3.9E-37 8.3E-42 302.9 7.5 201 409-618 12-213 (467)
56 KOG0194 Protein tyrosine kinas 100.0 1.7E-36 3.8E-41 312.5 12.6 201 410-617 157-364 (474)
57 cd05585 STKc_YPK1_like Catalyt 100.0 1E-35 2.2E-40 304.7 18.1 192 418-617 1-194 (312)
58 KOG0660 Mitogen-activated prot 100.0 2.5E-36 5.4E-41 291.5 12.5 202 408-617 20-229 (359)
59 cd05595 STKc_PKB_beta Catalyti 100.0 1.5E-35 3.2E-40 304.8 19.0 194 416-617 1-196 (323)
60 cd05597 STKc_DMPK_like Catalyt 100.0 1.2E-35 2.5E-40 306.7 18.3 202 410-617 1-209 (331)
61 KOG1095 Protein tyrosine kinas 100.0 3.6E-36 7.9E-41 330.9 15.0 205 409-617 691-906 (1025)
62 cd05573 STKc_ROCK_NDR_like Cat 100.0 5.6E-36 1.2E-40 312.0 15.6 201 410-617 1-231 (350)
63 cd05624 STKc_MRCK_beta Catalyt 100.0 9.2E-36 2E-40 307.5 16.9 202 410-617 1-209 (331)
64 cd05593 STKc_PKB_gamma Catalyt 100.0 2E-35 4.3E-40 304.5 18.9 194 416-617 1-196 (328)
65 cd05627 STKc_NDR2 Catalytic do 100.0 7.1E-36 1.5E-40 312.2 15.5 201 410-617 1-237 (360)
66 KOG2052 Activin A type IB rece 100.0 1.9E-35 4E-40 290.9 17.3 196 405-611 206-421 (513)
67 cd05614 STKc_MSK2_N N-terminal 100.0 1.5E-35 3.3E-40 306.3 17.5 200 411-617 1-208 (332)
68 cd05623 STKc_MRCK_alpha Cataly 100.0 1.7E-35 3.7E-40 305.7 17.7 202 410-617 1-209 (332)
69 cd05601 STKc_CRIK Catalytic do 100.0 6.9E-36 1.5E-40 308.6 14.6 202 410-617 1-210 (330)
70 KOG0589 Serine/threonine prote 100.0 3.2E-36 7E-41 304.6 11.4 203 410-618 4-208 (426)
71 cd05584 STKc_p70S6K Catalytic 100.0 3.1E-35 6.8E-40 302.5 18.1 194 416-617 2-201 (323)
72 cd05587 STKc_cPKC Catalytic do 100.0 4.6E-35 9.9E-40 301.5 19.1 199 411-617 1-202 (324)
73 cd05592 STKc_nPKC_theta_delta 100.0 4.2E-35 9.1E-40 300.5 18.4 194 416-617 1-197 (316)
74 cd05594 STKc_PKB_alpha Catalyt 100.0 2.7E-35 5.9E-40 303.4 16.4 194 416-617 1-197 (325)
75 cd05589 STKc_PKN Catalytic dom 100.0 6.2E-35 1.3E-39 300.6 18.9 197 412-617 1-202 (324)
76 cd05588 STKc_aPKC Catalytic do 100.0 5.3E-35 1.1E-39 301.6 18.2 194 416-617 1-197 (329)
77 cd05616 STKc_cPKC_beta Catalyt 100.0 5.6E-35 1.2E-39 300.7 18.4 199 411-617 1-202 (323)
78 cd05608 STKc_GRK1 Catalytic do 100.0 7.4E-35 1.6E-39 293.6 18.7 196 418-617 1-198 (280)
79 cd05618 STKc_aPKC_iota Catalyt 100.0 6.7E-35 1.5E-39 300.7 18.3 194 416-617 1-197 (329)
80 cd05590 STKc_nPKC_eta Catalyti 100.0 6.1E-35 1.3E-39 299.9 17.8 194 416-617 1-197 (320)
81 cd05591 STKc_nPKC_epsilon Cata 100.0 5.5E-35 1.2E-39 300.5 17.5 194 416-617 1-197 (321)
82 cd07859 STKc_TDY_MAPK_plant Ca 100.0 7.4E-35 1.6E-39 302.0 18.2 199 411-617 1-209 (338)
83 PTZ00283 serine/threonine prot 100.0 8.4E-35 1.8E-39 314.5 19.2 211 404-617 26-246 (496)
84 cd05582 STKc_RSK_N N-terminal 100.0 2.6E-35 5.7E-40 302.6 14.2 194 416-617 2-199 (318)
85 KOG0986 G protein-coupled rece 100.0 1E-35 2.2E-40 292.7 10.4 203 408-617 183-387 (591)
86 cd05575 STKc_SGK Catalytic dom 100.0 9.3E-35 2E-39 299.1 18.0 194 416-617 1-197 (323)
87 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.1E-34 2.4E-39 295.8 18.4 200 409-617 4-205 (303)
88 PTZ00267 NIMA-related protein 100.0 1.3E-34 2.9E-39 312.8 20.0 202 411-617 68-272 (478)
89 cd06649 PKc_MEK2 Catalytic dom 100.0 2.1E-34 4.6E-39 297.4 20.6 199 409-617 4-203 (331)
90 cd07871 STKc_PCTAIRE3 Catalyti 100.0 9.2E-35 2E-39 294.2 17.6 199 410-617 5-205 (288)
91 PHA03212 serine/threonine kina 100.0 1.4E-34 2.9E-39 304.4 19.3 193 408-616 90-283 (391)
92 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.6E-34 3.5E-39 288.9 18.8 202 409-617 4-210 (266)
93 cd05602 STKc_SGK1 Catalytic do 100.0 1.1E-34 2.3E-39 299.0 18.0 194 416-617 1-197 (325)
94 cd05603 STKc_SGK2 Catalytic do 100.0 1E-34 2.3E-39 298.5 17.8 194 416-617 1-197 (321)
95 cd07853 STKc_NLK Catalytic dom 100.0 1.9E-34 4E-39 302.8 19.5 199 411-617 1-206 (372)
96 cd05619 STKc_nPKC_theta Cataly 100.0 1.6E-34 3.5E-39 296.1 18.6 194 416-617 1-197 (316)
97 cd05620 STKc_nPKC_delta Cataly 100.0 1.5E-34 3.2E-39 296.5 18.2 194 416-617 1-197 (316)
98 cd05615 STKc_cPKC_alpha Cataly 100.0 1.6E-34 3.4E-39 297.3 18.4 200 411-618 1-203 (323)
99 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.5E-34 3.3E-39 297.8 17.9 194 416-617 1-197 (327)
100 cd07862 STKc_CDK6 Catalytic do 100.0 1.8E-34 4E-39 292.3 18.0 200 410-617 1-210 (290)
101 KOG0574 STE20-like serine/thre 100.0 2E-36 4.3E-41 282.9 3.2 197 411-618 34-231 (502)
102 KOG4250 TANK binding protein k 100.0 3.2E-35 6.9E-40 305.1 12.4 200 411-617 14-225 (732)
103 PHA02988 hypothetical protein; 100.0 2.6E-34 5.6E-39 289.9 18.8 192 416-618 26-224 (283)
104 cd05096 PTKc_DDR1 Catalytic do 100.0 3.1E-34 6.7E-39 292.8 19.5 205 409-617 4-243 (304)
105 cd05604 STKc_SGK3 Catalytic do 100.0 1.2E-34 2.7E-39 298.4 16.7 194 416-617 1-197 (325)
106 KOG0033 Ca2+/calmodulin-depend 100.0 1.8E-36 3.9E-41 275.8 2.4 200 409-617 10-213 (355)
107 KOG0032 Ca2+/calmodulin-depend 100.0 2.6E-34 5.6E-39 295.5 17.6 200 408-617 33-239 (382)
108 cd05114 PTKc_Tec_Rlk Catalytic 100.0 5E-34 1.1E-38 283.7 19.0 199 410-617 4-203 (256)
109 cd05570 STKc_PKC Catalytic dom 100.0 3.4E-34 7.4E-39 294.2 18.2 194 416-617 1-197 (318)
110 PLN00034 mitogen-activated pro 100.0 5.8E-34 1.3E-38 296.9 20.2 196 409-617 73-274 (353)
111 cd05605 STKc_GRK4_like Catalyt 100.0 5E-34 1.1E-38 288.4 19.0 200 411-617 1-202 (285)
112 cd06650 PKc_MEK1 Catalytic dom 100.0 6.1E-34 1.3E-38 294.0 19.5 199 409-617 4-203 (333)
113 PRK13184 pknD serine/threonine 100.0 6.4E-34 1.4E-38 315.7 20.7 205 410-617 2-232 (932)
114 KOG4717 Serine/threonine prote 100.0 1.2E-34 2.5E-39 288.5 13.3 202 409-618 17-221 (864)
115 cd05106 PTKc_CSF-1R Catalytic 100.0 3.6E-34 7.8E-39 300.1 17.4 207 407-617 35-316 (374)
116 cd05104 PTKc_Kit Catalytic dom 100.0 4.9E-34 1.1E-38 299.3 18.3 206 408-617 33-318 (375)
117 KOG1989 ARK protein kinase fam 100.0 2.7E-34 5.9E-39 306.9 15.9 206 408-618 35-260 (738)
118 KOG0612 Rho-associated, coiled 100.0 4.6E-35 9.9E-40 316.3 9.5 208 403-617 68-282 (1317)
119 KOG0690 Serine/threonine prote 100.0 7.6E-35 1.6E-39 275.1 9.7 202 408-617 166-369 (516)
120 cd05607 STKc_GRK7 Catalytic do 100.0 1.4E-33 3E-38 283.9 19.0 193 418-617 1-195 (277)
121 KOG2345 Serine/threonine prote 100.0 1.9E-34 4.2E-39 263.5 11.3 208 408-618 19-243 (302)
122 cd05072 PTKc_Lyn Catalytic dom 100.0 1.1E-33 2.3E-38 282.1 17.6 202 408-617 4-206 (261)
123 cd07876 STKc_JNK2 Catalytic do 100.0 1.5E-33 3.2E-38 294.6 19.3 198 408-617 19-223 (359)
124 cd05108 PTKc_EGFR Catalytic do 100.0 1.5E-33 3.2E-38 289.3 18.7 201 409-617 6-213 (316)
125 PTZ00036 glycogen synthase kin 100.0 8E-34 1.7E-38 303.3 17.3 198 408-617 64-272 (440)
126 KOG0599 Phosphorylase kinase g 100.0 6.7E-35 1.5E-39 269.4 7.7 199 409-616 16-228 (411)
127 PTZ00266 NIMA-related protein 100.0 1.1E-33 2.5E-38 314.8 18.9 211 405-617 8-244 (1021)
128 cd05068 PTKc_Frk_like Catalyti 100.0 2.6E-33 5.5E-38 279.4 19.6 202 408-617 4-206 (261)
129 KOG1025 Epidermal growth facto 100.0 9.5E-34 2.1E-38 296.1 16.9 199 412-618 698-903 (1177)
130 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.7E-33 3.6E-38 280.0 18.1 199 410-617 4-203 (256)
131 cd05630 STKc_GRK6 Catalytic do 100.0 2.6E-33 5.5E-38 283.1 19.3 199 412-617 2-202 (285)
132 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.1E-33 4.6E-38 295.5 19.1 207 407-617 34-341 (400)
133 cd05059 PTKc_Tec_like Catalyti 100.0 2E-33 4.2E-38 279.4 17.8 199 410-617 4-203 (256)
134 cd08529 STKc_FA2-like Catalyti 100.0 4.7E-33 1E-37 276.4 20.1 201 411-617 1-202 (256)
135 cd05632 STKc_GRK5 Catalytic do 100.0 3.9E-33 8.5E-38 281.8 19.8 199 412-617 2-202 (285)
136 cd06625 STKc_MEKK3_like Cataly 100.0 5.1E-33 1.1E-37 277.5 19.9 201 410-617 2-208 (263)
137 cd05586 STKc_Sck1_like Catalyt 100.0 5.9E-34 1.3E-38 294.1 13.6 192 418-617 1-198 (330)
138 KOG0586 Serine/threonine prote 100.0 2E-33 4.3E-38 288.1 16.7 204 405-617 51-256 (596)
139 cd08228 STKc_Nek6 Catalytic do 100.0 4.6E-33 9.9E-38 278.5 19.0 204 410-617 2-207 (267)
140 cd07875 STKc_JNK1 Catalytic do 100.0 3.6E-33 7.8E-38 292.2 18.8 198 408-617 22-226 (364)
141 KOG4279 Serine/threonine prote 100.0 2.5E-34 5.5E-39 294.9 9.7 192 417-617 582-779 (1226)
142 cd05062 PTKc_IGF-1R Catalytic 100.0 4.7E-33 1E-37 280.1 18.7 207 407-617 3-223 (277)
143 cd05049 PTKc_Trk Catalytic dom 100.0 4.3E-33 9.4E-38 280.7 18.4 205 409-617 4-226 (280)
144 cd07874 STKc_JNK3 Catalytic do 100.0 3.1E-33 6.8E-38 291.7 17.8 198 408-617 15-219 (355)
145 cd05048 PTKc_Ror Catalytic Dom 100.0 5.8E-33 1.3E-37 280.3 19.1 204 410-617 5-228 (283)
146 cd05033 PTKc_EphR Catalytic do 100.0 8.9E-33 1.9E-37 276.3 20.2 202 409-617 3-210 (266)
147 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4.3E-33 9.3E-38 285.0 18.1 199 410-617 6-206 (309)
148 cd05071 PTKc_Src Catalytic dom 100.0 6E-33 1.3E-37 276.9 18.6 200 409-617 5-205 (262)
149 KOG0667 Dual-specificity tyros 100.0 1.7E-33 3.7E-38 291.7 15.1 204 400-616 176-388 (586)
150 PF00069 Pkinase: Protein kina 100.0 2.9E-33 6.3E-38 278.5 16.1 199 412-618 1-201 (260)
151 cd07878 STKc_p38beta_MAPK11 Ca 100.0 5.1E-33 1.1E-37 288.8 18.6 197 408-617 13-217 (343)
152 cd05052 PTKc_Abl Catalytic dom 100.0 6.1E-33 1.3E-37 277.0 18.4 201 409-617 5-207 (263)
153 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 9.5E-33 2.1E-37 276.1 19.7 204 410-617 2-207 (267)
154 KOG0577 Serine/threonine prote 100.0 1.8E-34 3.9E-39 291.5 6.8 196 409-616 25-225 (948)
155 cd05054 PTKc_VEGFR Catalytic d 100.0 5.3E-33 1.1E-37 287.3 18.0 207 407-617 4-277 (337)
156 cd05067 PTKc_Lck_Blk Catalytic 100.0 7.5E-33 1.6E-37 275.9 18.3 201 408-617 4-205 (260)
157 cd05148 PTKc_Srm_Brk Catalytic 100.0 5.6E-33 1.2E-37 276.9 17.3 203 407-617 3-206 (261)
158 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 7.8E-33 1.7E-37 275.8 18.3 200 409-617 5-205 (260)
159 cd05085 PTKc_Fer Catalytic dom 100.0 1.4E-32 3E-37 272.2 19.8 194 417-617 2-196 (250)
160 cd07863 STKc_CDK4 Catalytic do 100.0 6.2E-33 1.3E-37 280.8 17.5 199 411-617 1-208 (288)
161 cd06619 PKc_MKK5 Catalytic dom 100.0 1.7E-32 3.7E-37 276.4 20.1 192 411-617 2-194 (279)
162 cd05580 STKc_PKA Catalytic dom 100.0 1.4E-32 3.1E-37 278.5 19.6 197 410-617 1-199 (290)
163 KOG0666 Cyclin C-dependent kin 100.0 4.7E-34 1E-38 268.5 8.0 204 410-617 24-241 (438)
164 KOG0584 Serine/threonine prote 100.0 5.3E-34 1.1E-38 292.6 9.0 195 414-617 44-244 (632)
165 cd07868 STKc_CDK8 Catalytic do 100.0 9.2E-33 2E-37 283.7 18.2 194 416-617 7-217 (317)
166 PF07714 Pkinase_Tyr: Protein 100.0 4.4E-33 9.6E-38 277.3 15.3 199 414-618 3-208 (259)
167 KOG4257 Focal adhesion tyrosin 100.0 2.5E-33 5.5E-38 284.8 13.6 205 405-617 384-594 (974)
168 PHA03207 serine/threonine kina 100.0 8E-33 1.7E-37 292.1 17.9 194 409-617 91-288 (392)
169 cd05090 PTKc_Ror1 Catalytic do 100.0 1.6E-32 3.4E-37 277.1 19.2 204 410-617 5-228 (283)
170 cd05084 PTKc_Fes Catalytic dom 100.0 1.9E-32 4E-37 271.6 19.2 195 416-617 1-198 (252)
171 cd05116 PTKc_Syk Catalytic dom 100.0 1.9E-32 4E-37 272.6 19.3 193 417-617 2-200 (257)
172 cd05093 PTKc_TrkB Catalytic do 100.0 1.8E-32 3.8E-37 277.6 19.4 204 409-617 4-224 (288)
173 cd05034 PTKc_Src_like Catalyti 100.0 1.5E-32 3.2E-37 273.8 18.5 202 408-617 4-206 (261)
174 PTZ00284 protein kinase; Provi 100.0 2E-32 4.3E-37 295.7 20.8 198 405-617 124-346 (467)
175 cd08229 STKc_Nek7 Catalytic do 100.0 1.4E-32 3.1E-37 274.9 18.3 204 410-617 2-207 (267)
176 cd05035 PTKc_Axl_like Catalyti 100.0 2.1E-32 4.6E-37 274.5 19.5 203 412-617 1-217 (273)
177 cd05111 PTK_HER3 Pseudokinase 100.0 1.9E-32 4.1E-37 276.0 19.2 200 410-617 7-213 (279)
178 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.7E-32 3.6E-37 277.3 18.8 200 410-617 1-202 (286)
179 cd06615 PKc_MEK Catalytic doma 100.0 2.7E-32 5.8E-37 278.9 20.4 198 410-617 1-199 (308)
180 cd07861 STKc_CDK1_euk Catalyti 100.0 1.7E-32 3.7E-37 277.1 18.6 201 411-617 1-203 (285)
181 KOG0984 Mitogen-activated prot 100.0 1.7E-33 3.7E-38 250.4 9.8 207 405-617 41-253 (282)
182 cd08221 STKc_Nek9 Catalytic do 100.0 3.1E-32 6.7E-37 270.7 20.0 201 411-617 1-202 (256)
183 cd06646 STKc_MAP4K5 Catalytic 100.0 2.3E-32 5.1E-37 273.4 19.2 199 409-617 8-210 (267)
184 cd05043 PTK_Ryk Pseudokinase d 100.0 2E-32 4.4E-37 275.9 18.8 206 408-617 4-221 (280)
185 cd05094 PTKc_TrkC Catalytic do 100.0 2.8E-32 6.1E-37 276.5 19.7 204 409-617 4-227 (291)
186 cd05069 PTKc_Yes Catalytic dom 100.0 2.5E-32 5.4E-37 272.1 18.9 199 410-617 6-205 (260)
187 cd05089 PTKc_Tie1 Catalytic do 100.0 2.8E-32 6E-37 277.4 19.6 202 410-617 2-220 (297)
188 cd08227 PK_STRAD_alpha Pseudok 100.0 2.3E-32 5E-37 281.8 19.2 198 415-617 3-211 (327)
189 PHA03211 serine/threonine kina 100.0 1.6E-32 3.5E-37 292.2 18.4 193 409-616 168-362 (461)
190 cd06631 STKc_YSK4 Catalytic do 100.0 2.5E-32 5.3E-37 272.9 18.7 200 411-617 1-209 (265)
191 cd05075 PTKc_Axl Catalytic dom 100.0 3.1E-32 6.7E-37 273.2 19.5 202 413-617 2-216 (272)
192 cd06638 STKc_myosinIIIA Cataly 100.0 2.3E-32 4.9E-37 276.4 18.7 212 399-617 7-230 (286)
193 KOG4278 Protein tyrosine kinas 100.0 2.5E-33 5.5E-38 284.3 11.4 205 404-616 261-467 (1157)
194 cd06654 STKc_PAK1 Catalytic do 100.0 2.5E-32 5.5E-37 277.5 18.9 199 408-617 18-217 (296)
195 KOG0607 MAP kinase-interacting 100.0 3.5E-33 7.5E-38 263.5 11.6 194 415-617 83-292 (463)
196 cd05088 PTKc_Tie2 Catalytic do 100.0 2E-32 4.3E-37 279.2 18.2 203 409-617 6-225 (303)
197 cd05112 PTKc_Itk Catalytic dom 100.0 2.8E-32 6E-37 271.0 18.7 199 410-617 4-203 (256)
198 KOG4236 Serine/threonine prote 100.0 9.4E-34 2E-38 282.7 8.0 196 415-618 569-768 (888)
199 cd06652 STKc_MEKK2 Catalytic d 100.0 3.7E-32 8E-37 271.7 19.7 201 410-617 2-210 (265)
200 cd05042 PTKc_Aatyk Catalytic d 100.0 2.8E-32 6.1E-37 273.2 18.7 197 417-617 2-211 (269)
201 cd05053 PTKc_FGFR Catalytic do 100.0 2.2E-32 4.7E-37 277.6 18.1 208 406-617 8-236 (293)
202 cd05032 PTKc_InsR_like Catalyt 100.0 2.1E-32 4.5E-37 275.3 17.7 206 408-617 4-223 (277)
203 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3.7E-32 7.9E-37 272.4 19.4 197 417-617 2-211 (269)
204 cd05066 PTKc_EphR_A Catalytic 100.0 3.3E-32 7.1E-37 272.4 19.0 201 410-617 4-211 (267)
205 cd05061 PTKc_InsR Catalytic do 100.0 3.3E-32 7.1E-37 275.6 19.2 207 407-617 3-223 (288)
206 cd05115 PTKc_Zap-70 Catalytic 100.0 4.1E-32 9E-37 270.1 19.5 193 417-617 2-200 (257)
207 cd05101 PTKc_FGFR2 Catalytic d 100.0 3.3E-32 7.2E-37 277.8 19.1 207 407-617 12-241 (304)
208 cd08219 STKc_Nek3 Catalytic do 100.0 3.2E-32 6.8E-37 270.5 18.4 200 411-617 1-201 (255)
209 cd06651 STKc_MEKK3 Catalytic d 100.0 5.2E-32 1.1E-36 270.8 19.9 201 410-617 2-210 (266)
210 cd05109 PTKc_HER2 Catalytic do 100.0 4E-32 8.7E-37 273.6 19.1 201 409-617 6-213 (279)
211 cd05073 PTKc_Hck Catalytic dom 100.0 3.8E-32 8.2E-37 270.8 18.6 201 408-617 4-205 (260)
212 cd06626 STKc_MEKK4 Catalytic d 100.0 5.9E-32 1.3E-36 269.8 20.0 200 411-617 1-207 (264)
213 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.3E-32 4.9E-37 276.4 17.1 200 410-617 1-202 (286)
214 cd05045 PTKc_RET Catalytic dom 100.0 4.3E-32 9.3E-37 275.0 19.2 203 411-617 1-231 (290)
215 cd06637 STKc_TNIK Catalytic do 100.0 2.9E-32 6.2E-37 273.5 17.7 202 407-617 3-217 (272)
216 cd06612 STKc_MST1_2 Catalytic 100.0 4.2E-32 9.1E-37 269.6 18.6 198 409-617 2-200 (256)
217 cd05107 PTKc_PDGFR_beta Cataly 100.0 3.3E-32 7E-37 286.4 18.6 208 406-617 33-343 (401)
218 cd05098 PTKc_FGFR1 Catalytic d 100.0 3.2E-32 7E-37 278.3 18.1 206 408-617 16-244 (307)
219 cd07833 STKc_CDKL Catalytic do 100.0 3.7E-32 8E-37 275.0 18.2 200 411-617 2-203 (288)
220 KOG0662 Cyclin-dependent kinas 100.0 3E-33 6.6E-38 243.2 8.7 197 411-615 3-201 (292)
221 cd06617 PKc_MKK3_6 Catalytic d 100.0 4.3E-32 9.4E-37 273.9 18.6 202 410-617 1-208 (283)
222 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.5E-32 7.7E-37 277.2 18.0 199 410-617 6-206 (301)
223 cd07867 STKc_CDC2L6 Catalytic 100.0 3.3E-32 7.2E-37 279.5 18.0 194 416-617 7-217 (317)
224 cd06645 STKc_MAP4K3 Catalytic 100.0 2.9E-32 6.4E-37 272.7 17.1 199 409-617 8-210 (267)
225 cd06643 STKc_SLK Catalytic dom 100.0 6.3E-32 1.4E-36 272.6 19.5 197 412-617 7-209 (282)
226 cd08223 STKc_Nek4 Catalytic do 100.0 6.8E-32 1.5E-36 268.3 19.5 201 411-617 1-203 (257)
227 cd05574 STKc_phototropin_like 100.0 6.8E-32 1.5E-36 277.1 20.0 203 410-617 1-233 (316)
228 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4.9E-32 1.1E-36 273.5 18.6 197 412-617 6-211 (283)
229 cd06613 STKc_MAP4K3_like Catal 100.0 7.4E-32 1.6E-36 268.8 19.4 200 409-617 2-205 (262)
230 cd06628 STKc_MAPKKK_Byr2_like 100.0 6.9E-32 1.5E-36 270.0 19.2 200 411-617 1-213 (267)
231 cd05091 PTKc_Ror2 Catalytic do 100.0 3.9E-32 8.4E-37 274.3 17.6 203 411-617 6-228 (283)
232 cd05065 PTKc_EphR_B Catalytic 100.0 6.1E-32 1.3E-36 270.7 18.8 201 410-617 4-213 (269)
233 cd05055 PTKc_PDGFR Catalytic d 100.0 5.7E-32 1.2E-36 275.6 18.8 205 407-617 32-245 (302)
234 cd05036 PTKc_ALK_LTK Catalytic 100.0 5.9E-32 1.3E-36 272.1 18.6 206 408-617 4-223 (277)
235 cd05095 PTKc_DDR2 Catalytic do 100.0 6.3E-32 1.4E-36 274.6 19.0 205 409-617 4-235 (296)
236 PHA03210 serine/threonine kina 100.0 2.2E-32 4.7E-37 296.6 16.5 206 406-615 144-367 (501)
237 cd06644 STKc_STK10_LOK Catalyt 100.0 9.9E-32 2.1E-36 272.6 20.3 199 410-617 12-216 (292)
238 cd06639 STKc_myosinIIIB Cataly 100.0 7.4E-32 1.6E-36 273.4 19.3 211 400-617 12-234 (291)
239 cd05097 PTKc_DDR_like Catalyti 100.0 5.4E-32 1.2E-36 275.0 18.3 206 408-617 3-234 (295)
240 cd06632 STKc_MEKK1_plant Catal 100.0 7.9E-32 1.7E-36 267.9 19.1 198 411-617 1-203 (258)
241 cd08217 STKc_Nek2 Catalytic do 100.0 7.4E-32 1.6E-36 269.0 18.9 203 411-617 1-211 (265)
242 cd06656 STKc_PAK3 Catalytic do 100.0 5.9E-32 1.3E-36 274.9 18.4 199 408-617 17-216 (297)
243 KOG0596 Dual specificity; seri 100.0 1.2E-32 2.7E-37 277.3 13.0 205 405-617 356-573 (677)
244 cd06655 STKc_PAK2 Catalytic do 100.0 7.5E-32 1.6E-36 274.0 19.0 199 408-617 17-216 (296)
245 cd05092 PTKc_TrkA Catalytic do 100.0 6.9E-32 1.5E-36 272.0 18.7 204 409-617 4-226 (280)
246 cd05086 PTKc_Aatyk2 Catalytic 100.0 1E-31 2.2E-36 269.0 19.7 197 417-617 2-210 (268)
247 cd07832 STKc_CCRK Catalytic do 100.0 7.5E-32 1.6E-36 272.5 18.9 200 411-617 1-202 (286)
248 cd05040 PTKc_Ack_like Catalyti 100.0 7.3E-32 1.6E-36 268.2 18.5 195 416-617 1-202 (257)
249 cd07839 STKc_CDK5 Catalytic do 100.0 2.7E-32 5.8E-37 275.6 15.6 198 411-616 1-200 (284)
250 cd00192 PTKc Catalytic domain 100.0 9.3E-32 2E-36 267.7 19.2 198 416-617 1-209 (262)
251 cd06609 STKc_MST3_like Catalyt 100.0 7.4E-32 1.6E-36 270.9 18.5 197 411-617 2-199 (274)
252 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 8.3E-32 1.8E-36 272.3 18.9 200 411-617 2-208 (286)
253 cd05063 PTKc_EphR_A2 Catalytic 100.0 8.9E-32 1.9E-36 269.3 18.9 202 409-617 4-212 (268)
254 PHA03209 serine/threonine kina 100.0 6.9E-32 1.5E-36 281.4 18.8 190 409-615 65-255 (357)
255 cd05099 PTKc_FGFR4 Catalytic d 100.0 8.5E-32 1.8E-36 276.1 19.2 207 407-617 9-238 (314)
256 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.2E-31 2.6E-36 267.8 19.8 201 410-617 2-210 (264)
257 cd06611 STKc_SLK_like Catalyti 100.0 5.9E-32 1.3E-36 272.5 17.6 200 409-617 4-209 (280)
258 cd05578 STKc_Yank1 Catalytic d 100.0 4.8E-32 1E-36 269.7 16.7 198 411-617 1-200 (258)
259 cd05609 STKc_MAST Catalytic do 100.0 1.1E-31 2.4E-36 274.0 19.8 201 410-617 1-217 (305)
260 cd05060 PTKc_Syk_like Catalyti 100.0 1.1E-31 2.4E-36 267.0 19.0 193 416-617 1-200 (257)
261 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.2E-31 2.7E-36 267.9 19.2 203 410-617 1-208 (267)
262 cd05051 PTKc_DDR Catalytic dom 100.0 1.1E-31 2.3E-36 272.9 19.1 205 409-617 4-235 (296)
263 cd05056 PTKc_FAK Catalytic dom 100.0 1.2E-31 2.6E-36 268.8 18.7 201 409-617 5-210 (270)
264 KOG0579 Ste20-like serine/thre 100.0 2.8E-33 6E-38 284.5 6.8 200 409-617 31-236 (1187)
265 cd05103 PTKc_VEGFR2 Catalytic 100.0 1E-31 2.2E-36 278.8 18.7 206 408-617 5-283 (343)
266 cd05047 PTKc_Tie Catalytic dom 100.0 1.4E-31 3.1E-36 268.2 19.1 195 417-617 2-213 (270)
267 cd05039 PTKc_Csk_like Catalyti 100.0 1.6E-31 3.6E-36 265.5 19.3 196 409-617 5-201 (256)
268 cd06640 STKc_MST4 Catalytic do 100.0 1.7E-31 3.7E-36 268.7 19.3 198 410-617 4-202 (277)
269 cd05046 PTK_CCK4 Pseudokinase 100.0 1.5E-31 3.2E-36 268.8 18.8 204 410-617 5-220 (275)
270 cd06642 STKc_STK25-YSK1 Cataly 100.0 8.7E-32 1.9E-36 270.8 17.1 197 411-617 5-202 (277)
271 cd05057 PTKc_EGFR_like Catalyt 100.0 1.8E-31 3.9E-36 268.8 19.4 201 409-617 6-213 (279)
272 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 8.5E-32 1.8E-36 272.0 16.9 198 410-617 5-203 (284)
273 cd08218 STKc_Nek1 Catalytic do 100.0 1.7E-31 3.7E-36 265.4 18.8 201 411-617 1-202 (256)
274 cd05041 PTKc_Fes_like Catalyti 100.0 1.9E-31 4.1E-36 264.2 19.0 195 416-617 1-197 (251)
275 cd06630 STKc_MEKK1 Catalytic d 100.0 1.6E-31 3.4E-36 267.5 18.6 200 411-617 1-209 (268)
276 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.9E-31 4E-36 269.5 19.2 199 410-616 4-211 (284)
277 cd05082 PTKc_Csk Catalytic dom 100.0 1.7E-31 3.6E-36 265.5 18.6 194 410-617 6-201 (256)
278 cd06658 STKc_PAK5 Catalytic do 100.0 9.1E-32 2E-36 272.8 17.0 196 411-617 23-219 (292)
279 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.5E-31 3.2E-36 270.2 18.4 200 410-616 4-212 (284)
280 cd05050 PTKc_Musk Catalytic do 100.0 1.3E-31 2.9E-36 271.1 18.0 206 408-617 3-234 (288)
281 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.2E-31 4.8E-36 269.3 19.5 201 410-617 1-204 (287)
282 cd07844 STKc_PCTAIRE_like Cata 100.0 1.2E-31 2.7E-36 271.8 17.6 199 410-617 5-205 (291)
283 KOG0696 Serine/threonine prote 100.0 9.5E-33 2E-37 268.3 8.9 203 408-618 347-552 (683)
284 cd06605 PKc_MAPKK Catalytic do 100.0 9.1E-32 2E-36 268.7 16.2 197 411-617 2-200 (265)
285 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.5E-31 3.3E-36 271.1 18.1 200 409-617 4-205 (291)
286 cd07841 STKc_CDK7 Catalytic do 100.0 1.9E-31 4.1E-36 271.4 18.8 199 411-617 1-204 (298)
287 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.2E-31 4.9E-36 265.5 18.8 188 417-617 2-211 (262)
288 cd08220 STKc_Nek8 Catalytic do 100.0 2.8E-31 6.1E-36 263.6 19.5 200 411-617 1-202 (256)
289 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.9E-31 4.2E-36 275.9 18.9 206 408-617 10-238 (334)
290 cd06624 STKc_ASK Catalytic dom 100.0 3E-31 6.4E-36 265.6 19.7 203 406-617 4-212 (268)
291 cd06608 STKc_myosinIII_like Ca 100.0 1.8E-31 3.9E-36 267.9 17.7 204 407-617 3-219 (275)
292 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.7E-31 5.8E-36 266.5 18.8 200 411-617 2-213 (272)
293 cd05613 STKc_MSK1_N N-terminal 100.0 2.6E-31 5.7E-36 269.2 18.9 200 411-617 1-209 (290)
294 cd07860 STKc_CDK2_3 Catalytic 100.0 2E-31 4.4E-36 269.1 18.0 200 411-617 1-202 (284)
295 cd06659 STKc_PAK6 Catalytic do 100.0 1.4E-31 3E-36 272.1 16.7 195 412-617 23-218 (297)
296 cd08528 STKc_Nek10 Catalytic d 100.0 2.4E-31 5.2E-36 266.4 18.2 203 411-617 1-214 (269)
297 cd06623 PKc_MAPKK_plant_like C 100.0 3.6E-31 7.7E-36 264.1 19.1 198 411-617 2-201 (264)
298 cd05606 STKc_beta_ARK Catalyti 100.0 3.2E-31 6.9E-36 266.9 18.9 191 417-617 1-197 (278)
299 cd05633 STKc_GRK3 Catalytic do 100.0 2.3E-31 5E-36 268.0 17.8 191 417-617 1-197 (279)
300 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.6E-31 5.7E-36 264.3 17.6 187 416-617 1-208 (259)
301 cd05577 STKc_GRK Catalytic dom 100.0 2.8E-31 6E-36 267.2 17.9 193 418-617 1-195 (277)
302 cd05058 PTKc_Met_Ron Catalytic 100.0 4.5E-31 9.8E-36 263.3 19.2 195 416-617 1-204 (262)
303 cd05110 PTKc_HER4 Catalytic do 100.0 2.8E-31 6E-36 270.8 18.0 201 409-617 6-213 (303)
304 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 3.3E-31 7.3E-36 266.1 18.1 188 417-617 2-223 (274)
305 smart00219 TyrKc Tyrosine kina 100.0 5.3E-31 1.2E-35 261.8 19.1 199 413-617 2-206 (258)
306 cd08530 STKc_CNK2-like Catalyt 100.0 3.3E-31 7.2E-36 263.1 17.5 201 411-617 1-202 (256)
307 cd06917 STKc_NAK1_like Catalyt 100.0 4.8E-31 1E-35 265.4 18.6 197 411-617 2-203 (277)
308 cd07842 STKc_CDK8_like Catalyt 100.0 3.4E-31 7.3E-36 271.8 17.8 203 411-617 1-217 (316)
309 cd05572 STKc_cGK_PKG Catalytic 100.0 4.9E-31 1.1E-35 263.0 18.4 191 418-617 1-193 (262)
310 KOG0608 Warts/lats-like serine 100.0 5.5E-32 1.2E-36 275.4 11.4 203 409-618 628-873 (1034)
311 cd08215 STKc_Nek Catalytic dom 100.0 8.5E-31 1.8E-35 260.1 19.9 203 411-617 1-204 (258)
312 KOG4645 MAPKKK (MAP kinase kin 100.0 3.1E-33 6.8E-38 305.8 2.5 206 405-617 1230-1442(1509)
313 KOG0983 Mitogen-activated prot 100.0 1.1E-31 2.5E-36 248.3 12.4 201 408-617 90-295 (391)
314 KOG0199 ACK and related non-re 100.0 2.9E-32 6.4E-37 280.4 9.4 200 411-617 111-317 (1039)
315 cd06647 STKc_PAK_I Catalytic d 100.0 5.8E-31 1.2E-35 267.1 18.8 199 408-617 17-216 (293)
316 cd06636 STKc_MAP4K4_6 Catalyti 100.0 4.9E-31 1.1E-35 266.1 18.1 207 402-617 8-227 (282)
317 cd06641 STKc_MST3 Catalytic do 100.0 8.8E-31 1.9E-35 263.6 19.8 197 411-617 5-202 (277)
318 cd05044 PTKc_c-ros Catalytic d 100.0 2.6E-31 5.5E-36 266.1 15.9 197 417-617 2-215 (269)
319 cd08225 STKc_Nek5 Catalytic do 100.0 5.6E-31 1.2E-35 261.7 18.0 201 411-617 1-203 (257)
320 cd07843 STKc_CDC2L1 Catalytic 100.0 3.8E-31 8.2E-36 268.5 17.0 200 410-617 5-208 (293)
321 cd07850 STKc_JNK Catalytic dom 100.0 6.5E-31 1.4E-35 274.0 19.2 198 408-617 14-218 (353)
322 cd05083 PTKc_Chk Catalytic dom 100.0 5.4E-31 1.2E-35 261.5 17.5 193 410-617 6-199 (254)
323 PLN00009 cyclin-dependent kina 100.0 7.4E-31 1.6E-35 266.5 18.8 201 410-617 2-205 (294)
324 cd07837 STKc_CdkB_plant Cataly 100.0 6E-31 1.3E-35 267.2 18.1 203 410-617 1-213 (295)
325 cd05074 PTKc_Tyro3 Catalytic d 100.0 8.7E-31 1.9E-35 262.9 18.9 203 412-617 1-217 (273)
326 cd06607 STKc_TAO Catalytic dom 100.0 1.2E-30 2.5E-35 266.8 20.0 198 408-617 13-215 (307)
327 cd07835 STKc_CDK1_like Catalyt 100.0 8.1E-31 1.7E-35 264.6 18.6 199 412-617 1-201 (283)
328 cd07864 STKc_CDK12 Catalytic d 100.0 5.4E-31 1.2E-35 268.5 17.5 204 407-617 4-219 (302)
329 cd06614 STKc_PAK Catalytic dom 100.0 7.4E-31 1.6E-35 265.4 18.3 201 407-617 16-217 (286)
330 cd07840 STKc_CDK9_like Catalyt 100.0 7.3E-31 1.6E-35 265.3 18.3 199 412-617 1-203 (287)
331 cd07845 STKc_CDK10 Catalytic d 100.0 5.3E-31 1.1E-35 269.6 17.3 201 409-617 6-210 (309)
332 cd06627 STKc_Cdc7_like Catalyt 100.0 1.8E-30 3.8E-35 257.4 20.2 199 411-617 1-200 (254)
333 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 7.5E-31 1.6E-35 264.8 17.5 201 410-617 4-213 (284)
334 KOG1024 Receptor-like protein 100.0 2.4E-31 5.2E-36 257.3 13.0 214 401-618 275-501 (563)
335 cd07855 STKc_ERK5 Catalytic do 100.0 5E-31 1.1E-35 272.7 16.5 201 409-617 4-213 (334)
336 cd05122 PKc_STE Catalytic doma 100.0 1.9E-30 4.1E-35 256.6 19.8 198 411-618 1-199 (253)
337 KOG1006 Mitogen-activated prot 100.0 3.7E-33 7.9E-38 257.3 0.2 201 412-618 66-271 (361)
338 cd06648 STKc_PAK_II Catalytic 100.0 1.6E-30 3.4E-35 262.8 19.4 196 411-617 20-216 (285)
339 cd05579 STKc_MAST_like Catalyt 100.0 9.3E-31 2E-35 261.1 17.5 193 418-617 1-202 (265)
340 PHA02882 putative serine/threo 100.0 1.1E-30 2.3E-35 265.2 18.2 202 408-617 10-234 (294)
341 KOG0614 cGMP-dependent protein 100.0 1.7E-32 3.7E-37 273.0 4.8 200 409-617 419-620 (732)
342 cd05611 STKc_Rim15_like Cataly 100.0 1.5E-30 3.3E-35 259.2 18.8 190 416-617 2-194 (260)
343 cd07836 STKc_Pho85 Catalytic d 100.0 1.2E-30 2.7E-35 263.3 18.2 200 411-617 1-202 (284)
344 KOG0664 Nemo-like MAPK-related 100.0 7.3E-33 1.6E-37 255.9 1.7 197 413-617 56-259 (449)
345 cd07849 STKc_ERK1_2_like Catal 100.0 1E-30 2.3E-35 270.6 18.0 199 409-617 4-211 (336)
346 KOG0695 Serine/threonine prote 100.0 3.6E-31 7.8E-36 251.1 13.1 202 408-617 248-452 (593)
347 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.7E-30 3.6E-35 269.9 19.3 203 402-617 9-219 (345)
348 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 6.4E-31 1.4E-35 261.6 15.3 189 416-617 1-207 (258)
349 cd07852 STKc_MAPK15 Catalytic 100.0 1E-30 2.3E-35 270.7 17.5 201 408-617 5-214 (337)
350 cd06606 STKc_MAPKKK Catalytic 100.0 2.5E-30 5.5E-35 256.8 19.4 200 411-617 1-204 (260)
351 cd07865 STKc_CDK9 Catalytic do 100.0 1.4E-30 2.9E-35 266.5 17.8 202 409-617 11-225 (310)
352 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.4E-30 3.1E-35 269.7 17.7 200 409-617 4-210 (337)
353 cd05583 STKc_MSK_N N-terminal 100.0 1.8E-30 3.8E-35 262.9 18.0 200 411-617 1-209 (288)
354 cd06616 PKc_MKK4 Catalytic dom 100.0 1.1E-30 2.4E-35 264.4 16.4 201 411-617 5-211 (288)
355 cd05581 STKc_PDK1 Catalytic do 100.0 1.5E-30 3.3E-35 262.0 17.3 201 410-617 1-223 (280)
356 cd06657 STKc_PAK4 Catalytic do 100.0 2.2E-30 4.8E-35 262.6 18.4 193 414-617 24-217 (292)
357 KOG1151 Tousled-like protein k 100.0 1.3E-31 2.7E-36 262.6 8.7 207 406-617 459-685 (775)
358 cd06635 STKc_TAO1 Catalytic do 100.0 4.1E-30 9E-35 263.9 20.2 196 410-617 25-225 (317)
359 cd07880 STKc_p38gamma_MAPK12 C 100.0 3E-30 6.5E-35 267.8 18.8 197 408-617 13-217 (343)
360 cd07834 STKc_MAPK Catalytic do 100.0 1.6E-30 3.5E-35 268.6 16.7 199 411-617 1-208 (330)
361 PHA03390 pk1 serine/threonine- 100.0 4.3E-30 9.4E-35 257.0 19.1 190 409-617 13-207 (267)
362 KOG1035 eIF-2alpha kinase GCN2 100.0 3.4E-31 7.4E-36 288.7 11.8 199 406-611 475-813 (1351)
363 cd08226 PK_STRAD_beta Pseudoki 100.0 3.2E-30 6.9E-35 266.0 17.9 196 417-617 5-211 (328)
364 cd07831 STKc_MOK Catalytic dom 100.0 5.4E-30 1.2E-34 258.4 19.2 195 412-617 1-200 (282)
365 cd07866 STKc_BUR1 Catalytic do 100.0 2E-30 4.3E-35 265.4 16.1 202 409-617 7-228 (311)
366 cd08216 PK_STRAD Pseudokinase 100.0 4E-30 8.6E-35 263.7 17.9 195 417-617 9-211 (314)
367 cd07879 STKc_p38delta_MAPK13 C 100.0 4E-30 8.7E-35 266.8 18.1 195 409-617 14-216 (342)
368 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 5.1E-30 1.1E-34 264.2 18.3 198 407-617 7-207 (328)
369 cd07838 STKc_CDK4_6_like Catal 100.0 6.5E-30 1.4E-34 258.4 18.6 198 412-617 1-207 (287)
370 cd05118 STKc_CMGC Catalytic do 100.0 5.1E-30 1.1E-34 258.6 17.3 198 412-617 1-200 (283)
371 KOG0604 MAP kinase-activated p 100.0 3.3E-31 7.2E-36 248.3 7.6 193 410-616 61-263 (400)
372 KOG0200 Fibroblast/platelet-de 100.0 3.3E-30 7.2E-35 283.8 16.8 208 406-617 292-523 (609)
373 cd07857 STKc_MPK1 Catalytic do 100.0 9.2E-30 2E-34 263.1 18.1 199 411-617 1-211 (332)
374 cd06618 PKc_MKK7 Catalytic dom 100.0 1.4E-29 2.9E-34 257.5 18.8 201 408-617 13-219 (296)
375 cd06633 STKc_TAO3 Catalytic do 100.0 2.5E-29 5.5E-34 257.5 20.9 194 412-617 23-221 (313)
376 cd08222 STKc_Nek11 Catalytic d 100.0 7.4E-30 1.6E-34 254.2 16.4 202 411-617 1-206 (260)
377 cd07851 STKc_p38 Catalytic dom 100.0 6.9E-30 1.5E-34 265.1 16.3 197 408-617 13-217 (343)
378 cd05123 STKc_AGC Catalytic dom 100.0 1.8E-29 3.9E-34 249.8 18.4 192 418-617 1-194 (250)
379 KOG1152 Signal transduction se 100.0 1.3E-30 2.9E-35 263.5 10.4 197 410-616 561-769 (772)
380 cd06634 STKc_TAO2 Catalytic do 100.0 1.4E-29 3.1E-34 258.8 17.9 197 409-617 14-215 (308)
381 cd07830 STKc_MAK_like Catalyti 100.0 1.9E-29 4E-34 254.6 18.2 197 412-617 1-200 (283)
382 cd07829 STKc_CDK_like Catalyti 100.0 1.2E-29 2.5E-34 255.8 16.7 198 412-617 1-200 (282)
383 PTZ00024 cyclin-dependent prot 100.0 1.5E-29 3.2E-34 261.9 17.7 200 410-617 8-235 (335)
384 cd05610 STKc_MASTL Catalytic d 100.0 2.6E-29 5.7E-34 280.9 20.0 147 410-563 4-152 (669)
385 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.9E-29 4.1E-34 261.7 16.5 197 410-617 5-220 (342)
386 KOG0587 Traf2- and Nck-interac 100.0 1.4E-29 3.1E-34 268.1 14.9 208 402-618 11-230 (953)
387 KOG0669 Cyclin T-dependent kin 100.0 2.2E-31 4.8E-36 243.6 0.3 201 410-617 17-230 (376)
388 cd05576 STKc_RPK118_like Catal 100.0 5.1E-29 1.1E-33 244.6 16.1 179 421-617 4-183 (237)
389 PLN03224 probable serine/threo 100.0 1.8E-28 3.8E-33 260.8 18.3 208 407-617 142-434 (507)
390 KOG0603 Ribosomal protein S6 k 100.0 2.6E-29 5.6E-34 259.4 10.9 191 409-617 321-514 (612)
391 smart00221 STYKc Protein kinas 100.0 1E-27 2.2E-32 232.8 19.0 199 412-617 1-201 (225)
392 PLN03225 Serine/threonine-prot 100.0 8.8E-28 1.9E-32 262.1 16.0 201 408-617 130-380 (566)
393 KOG0671 LAMMER dual specificit 100.0 9.7E-29 2.1E-33 239.7 7.5 205 400-617 79-310 (415)
394 KOG0668 Casein kinase II, alph 99.9 2.1E-28 4.6E-33 221.1 7.5 191 409-616 37-233 (338)
395 KOG0665 Jun-N-terminal kinase 99.9 1.3E-28 2.7E-33 233.5 5.7 196 409-617 16-218 (369)
396 smart00220 S_TKc Serine/Threon 99.9 9.6E-27 2.1E-31 228.4 17.3 186 422-617 1-187 (244)
397 PLN00113 leucine-rich repeat r 99.9 8.4E-27 1.8E-31 274.5 18.4 220 35-257 22-273 (968)
398 KOG1027 Serine/threonine prote 99.9 4.4E-28 9.4E-33 255.7 6.4 198 411-618 510-717 (903)
399 KOG1345 Serine/threonine kinas 99.9 4.1E-27 8.8E-32 218.0 7.1 196 408-618 22-227 (378)
400 KOG0576 Mitogen-activated prot 99.9 4.6E-27 1E-31 241.8 3.7 199 407-615 12-214 (829)
401 KOG1290 Serine/threonine prote 99.9 1.6E-24 3.4E-29 216.1 17.6 131 410-548 78-221 (590)
402 cd00180 PKc Catalytic domain o 99.9 5.7E-24 1.2E-28 203.6 18.1 184 418-609 1-187 (215)
403 KOG0670 U4/U6-associated splic 99.9 1.2E-25 2.6E-30 224.9 6.5 207 399-616 421-635 (752)
404 KOG1167 Serine/threonine prote 99.9 4.5E-25 9.7E-30 217.3 8.1 198 405-616 31-278 (418)
405 PRK09188 serine/threonine prot 99.9 6E-24 1.3E-28 216.9 15.7 169 407-592 15-196 (365)
406 KOG1163 Casein kinase (serine/ 99.9 1.1E-22 2.4E-27 185.7 9.7 199 409-618 14-223 (341)
407 KOG1164 Casein kinase (serine/ 99.9 3.8E-22 8.1E-27 204.5 14.8 199 411-617 19-238 (322)
408 PLN00181 protein SPA1-RELATED; 99.9 4.5E-23 9.7E-28 236.5 7.8 146 465-617 29-216 (793)
409 COG0515 SPS1 Serine/threonine 99.9 4E-21 8.7E-26 197.3 18.6 200 412-617 2-212 (384)
410 KOG0195 Integrin-linked kinase 99.9 2.2E-22 4.7E-27 186.6 6.8 194 412-618 192-391 (448)
411 cd05147 RIO1_euk RIO kinase fa 99.9 1.5E-21 3.2E-26 183.5 11.3 142 415-566 2-168 (190)
412 PRK10359 lipopolysaccharide co 99.9 2.2E-21 4.7E-26 184.1 11.3 175 406-610 27-216 (232)
413 KOG1165 Casein kinase (serine/ 99.9 2.4E-21 5.2E-26 184.8 11.6 197 410-617 28-237 (449)
414 PLN03150 hypothetical protein; 99.8 1E-20 2.2E-25 209.1 16.4 136 37-198 367-511 (623)
415 cd05145 RIO1_like RIO kinase f 99.8 2.6E-20 5.7E-25 175.7 13.6 142 415-567 2-169 (190)
416 PRK12274 serine/threonine prot 99.8 6E-20 1.3E-24 170.3 14.4 184 414-616 6-207 (218)
417 smart00750 KIND kinase non-cat 99.8 1.5E-20 3.2E-25 175.5 9.7 105 493-617 1-105 (176)
418 KOG0590 Checkpoint kinase and 99.8 4.3E-21 9.3E-26 208.9 4.7 197 413-617 321-526 (601)
419 KOG0603 Ribosomal protein S6 k 99.8 3.5E-21 7.7E-26 199.4 1.0 187 417-617 1-192 (612)
420 PRK10345 hypothetical protein; 99.8 1.6E-18 3.4E-23 164.3 13.1 139 412-564 4-159 (210)
421 KOG0617 Ras suppressor protein 99.8 5.2E-21 1.1E-25 166.0 -5.4 173 81-258 31-213 (264)
422 KOG1166 Mitotic checkpoint ser 99.8 1.2E-18 2.7E-23 193.1 10.3 200 405-614 693-901 (974)
423 smart00090 RIO RIO-like kinase 99.7 9.2E-18 2E-22 163.2 13.0 145 411-567 29-200 (237)
424 PRK14879 serine/threonine prot 99.7 4.4E-17 9.6E-22 156.8 13.9 138 416-566 2-145 (211)
425 PF14531 Kinase-like: Kinase-l 99.7 2.2E-17 4.8E-22 161.5 10.3 199 411-617 13-251 (288)
426 PRK09605 bifunctional UGMP fam 99.7 6.3E-17 1.4E-21 177.2 14.8 143 409-567 332-479 (535)
427 TIGR03724 arch_bud32 Kae1-asso 99.7 4.2E-17 9E-22 155.4 11.7 134 417-566 1-140 (199)
428 cd05144 RIO2_C RIO kinase fami 99.7 4.8E-17 1.1E-21 154.7 11.9 139 411-566 16-176 (198)
429 KOG1240 Protein kinase contain 99.7 3.1E-18 6.7E-23 186.2 3.9 197 411-617 24-240 (1431)
430 KOG4194 Membrane glycoprotein 99.7 1E-18 2.2E-23 178.1 0.1 185 76-260 262-455 (873)
431 KOG0606 Microtubule-associated 99.7 3.5E-17 7.6E-22 178.0 6.5 164 408-617 81-259 (1205)
432 KOG4158 BRPK/PTEN-induced prot 99.7 1.3E-16 2.7E-21 156.1 8.6 143 466-617 274-458 (598)
433 KOG4237 Extracellular matrix p 99.6 5.5E-17 1.2E-21 158.6 1.0 192 69-260 39-362 (498)
434 cd05119 RIO RIO kinase family, 99.6 2.3E-15 5.1E-20 141.8 11.7 138 415-566 2-165 (187)
435 KOG0444 Cytoskeletal regulator 99.6 3.7E-17 7.9E-22 167.7 -1.7 172 83-259 103-306 (1255)
436 cd05120 APH_ChoK_like Aminogly 99.6 4.5E-15 9.6E-20 134.3 12.2 135 415-565 3-139 (155)
437 KOG4194 Membrane glycoprotein 99.6 4.1E-16 8.9E-21 159.2 5.3 173 84-257 79-258 (873)
438 KOG1023 Natriuretic peptide re 99.6 1.6E-15 3.4E-20 157.9 9.3 151 462-618 1-160 (484)
439 PRK01723 3-deoxy-D-manno-octul 99.6 7.7E-15 1.7E-19 143.0 13.5 138 416-566 37-193 (239)
440 PRK15370 E3 ubiquitin-protein 99.6 9.3E-15 2E-19 162.5 15.4 210 33-258 54-339 (754)
441 KOG1033 eIF-2alpha kinase PEK/ 99.6 2.5E-16 5.5E-21 160.6 1.9 123 482-611 330-457 (516)
442 KOG0617 Ras suppressor protein 99.6 9.9E-17 2.2E-21 139.5 -2.0 155 102-260 28-189 (264)
443 KOG0444 Cytoskeletal regulator 99.6 1.5E-16 3.3E-21 163.2 -1.6 171 84-258 8-187 (1255)
444 KOG0590 Checkpoint kinase and 99.5 9.8E-16 2.1E-20 167.1 1.1 202 410-617 20-231 (601)
445 KOG0472 Leucine-rich repeat pr 99.5 1.4E-16 3.1E-21 155.9 -8.6 169 84-258 138-311 (565)
446 PRK15370 E3 ubiquitin-protein 99.5 4.3E-14 9.4E-19 157.3 8.8 162 84-258 221-402 (754)
447 PRK15387 E3 ubiquitin-protein 99.5 1.7E-13 3.6E-18 151.7 11.8 33 84-120 223-255 (788)
448 TIGR01982 UbiB 2-polyprenylphe 99.5 2.7E-13 5.8E-18 143.6 12.0 143 415-566 122-308 (437)
449 PRK15387 E3 ubiquitin-protein 99.5 2.5E-13 5.5E-18 150.3 11.4 161 79-258 197-376 (788)
450 KOG0532 Leucine-rich repeat (L 99.4 2.8E-15 6E-20 153.1 -5.4 170 84-260 76-250 (722)
451 KOG0618 Serine/threonine phosp 99.4 2.8E-14 6E-19 153.5 -2.4 171 85-258 289-490 (1081)
452 KOG0472 Leucine-rich repeat pr 99.4 1.1E-14 2.3E-19 142.9 -5.2 154 84-243 161-316 (565)
453 PRK04750 ubiB putative ubiquin 99.4 8.1E-13 1.8E-17 141.4 7.1 148 409-567 119-316 (537)
454 cd00116 LRR_RI Leucine-rich re 99.3 3.7E-13 7.9E-18 138.2 1.7 178 82-259 80-293 (319)
455 cd05151 ChoK Choline Kinase (C 99.3 1.1E-11 2.3E-16 114.7 10.1 132 415-565 3-137 (170)
456 PLN03150 hypothetical protein; 99.3 4.4E-12 9.5E-17 140.6 8.5 107 154-260 419-531 (623)
457 cd05146 RIO3_euk RIO kinase fa 99.3 2.8E-11 6.1E-16 112.7 11.6 138 416-566 3-175 (197)
458 cd00116 LRR_RI Leucine-rich re 99.3 1.3E-12 2.9E-17 134.0 1.8 175 83-257 51-263 (319)
459 KOG1243 Protein kinase [Genera 99.3 4.4E-11 9.5E-16 126.0 13.0 166 431-612 34-199 (690)
460 PLN03210 Resistant to P. syrin 99.3 2.6E-11 5.6E-16 144.2 12.8 35 178-212 779-813 (1153)
461 KOG0618 Serine/threonine phosp 99.3 3.1E-13 6.8E-18 145.6 -3.4 174 83-260 241-446 (1081)
462 PLN03210 Resistant to P. syrin 99.2 8E-11 1.7E-15 140.0 13.1 166 84-253 658-878 (1153)
463 KOG0601 Cyclin-dependent kinas 99.2 1.6E-11 3.4E-16 128.3 5.9 199 409-615 113-326 (524)
464 COG3642 Mn2+-dependent serine/ 99.2 2.4E-10 5.3E-15 102.5 12.1 136 417-568 3-144 (204)
465 KOG1266 Protein kinase [Signal 99.2 3.2E-11 6.8E-16 116.1 6.0 154 459-613 118-279 (458)
466 KOG0532 Leucine-rich repeat (L 99.2 1.1E-12 2.5E-17 134.3 -4.4 152 85-243 100-253 (722)
467 PF14580 LRR_9: Leucine-rich r 99.1 3.9E-11 8.4E-16 109.5 5.2 111 103-215 15-127 (175)
468 cd05154 ACAD10_11_like Acyl-Co 99.1 4E-10 8.6E-15 109.1 12.4 144 416-565 4-207 (223)
469 PF14580 LRR_9: Leucine-rich r 99.1 3.2E-11 7E-16 110.1 3.9 121 84-208 20-147 (175)
470 KOG3087 Serine/threonine prote 99.1 1.2E-09 2.5E-14 97.5 12.5 147 414-566 11-167 (229)
471 KOG0601 Cyclin-dependent kinas 99.1 4.3E-11 9.3E-16 125.0 3.7 198 406-614 261-464 (524)
472 COG4886 Leucine-rich repeat (L 99.1 1E-10 2.2E-15 123.9 4.5 168 85-257 118-290 (394)
473 KOG1859 Leucine-rich repeat pr 99.0 1.5E-11 3.3E-16 129.2 -2.1 127 129-260 164-295 (1096)
474 KOG1259 Nischarin, modulator o 99.0 2E-11 4.4E-16 115.8 -1.2 127 129-259 284-414 (490)
475 KOG3207 Beta-tubulin folding c 99.0 5.5E-11 1.2E-15 118.6 0.9 175 83-259 146-341 (505)
476 COG4886 Leucine-rich repeat (L 99.0 1.3E-10 2.9E-15 122.9 3.6 155 84-243 141-297 (394)
477 KOG0606 Microtubule-associated 99.0 6.1E-11 1.3E-15 130.1 1.0 204 408-618 802-1037(1205)
478 KOG1259 Nischarin, modulator o 99.0 5.8E-11 1.3E-15 112.7 0.1 105 150-257 281-387 (490)
479 PF13855 LRR_8: Leucine rich r 99.0 3.9E-10 8.5E-15 84.6 3.7 60 130-189 2-61 (61)
480 PF01163 RIO1: RIO1 family; I 99.0 4.3E-09 9.2E-14 97.8 10.9 128 425-566 1-157 (188)
481 PRK15123 lipopolysaccharide co 98.9 1.6E-08 3.5E-13 99.7 14.5 142 417-564 29-194 (268)
482 PF13855 LRR_8: Leucine rich r 98.9 5.8E-10 1.3E-14 83.7 3.0 61 153-213 1-61 (61)
483 KOG4237 Extracellular matrix p 98.8 6.7E-10 1.4E-14 109.5 0.4 141 122-263 60-207 (498)
484 KOG0531 Protein phosphatase 1, 98.8 1.2E-09 2.7E-14 115.9 0.7 170 83-258 95-269 (414)
485 KOG3741 Poly(A) ribonuclease s 98.8 7.5E-08 1.6E-12 98.9 12.3 169 422-613 288-473 (655)
486 KOG0531 Protein phosphatase 1, 98.7 2.2E-09 4.7E-14 114.0 -1.5 170 84-259 73-247 (414)
487 COG0478 RIO-like serine/threon 98.7 2.2E-07 4.7E-12 88.8 12.1 137 413-565 94-252 (304)
488 KOG3207 Beta-tubulin folding c 98.6 7.4E-09 1.6E-13 103.7 0.7 174 84-257 122-314 (505)
489 COG4248 Uncharacterized protei 98.6 5.7E-07 1.2E-11 90.2 13.7 192 415-617 16-223 (637)
490 PRK09902 hypothetical protein; 98.6 5.9E-07 1.3E-11 84.0 12.5 141 417-564 25-179 (216)
491 PF06293 Kdo: Lipopolysacchari 98.6 2E-07 4.4E-12 88.9 9.8 108 452-566 55-172 (206)
492 COG0661 AarF Predicted unusual 98.5 2.9E-07 6.3E-12 98.3 9.5 143 416-567 131-317 (517)
493 PF08263 LRRNT_2: Leucine rich 98.5 1.9E-07 4.2E-12 64.1 4.5 39 41-81 2-43 (43)
494 KOG4579 Leucine-rich repeat (L 98.5 6.2E-09 1.3E-13 88.0 -4.2 126 85-215 29-160 (177)
495 KOG1909 Ran GTPase-activating 98.5 2.8E-08 6.1E-13 97.0 -0.5 174 84-257 93-311 (382)
496 KOG0576 Mitogen-activated prot 98.4 3.7E-08 8.1E-13 103.4 0.2 190 406-615 238-429 (829)
497 PF06176 WaaY: Lipopolysacchar 98.4 5E-06 1.1E-10 78.1 14.2 141 407-564 28-183 (229)
498 COG1718 RIO1 Serine/threonine 98.4 3.5E-06 7.5E-11 79.9 12.4 138 417-566 55-217 (268)
499 TIGR02172 Fb_sc_TIGR02172 Fibr 98.4 4.5E-06 9.7E-11 80.7 13.1 141 416-565 7-183 (226)
500 KOG1859 Leucine-rich repeat pr 98.4 4.7E-09 1E-13 110.9 -8.5 122 108-236 165-292 (1096)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=5.1e-57 Score=530.27 Aligned_cols=465 Identities=29% Similarity=0.451 Sum_probs=310.6
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEe
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 160 (618)
..++.|+|++|+++|.+|..+.+++.|+.|+|++|.+++.+|..+. ++|+.|+|++|++.+.+|..+ .+++|+.|+|
T Consensus 404 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~l 482 (968)
T PLN00113 404 RSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDL 482 (968)
T ss_pred CCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEEC
Confidence 4677888888888888888888888888888888888887776543 677888888887777777655 3477777777
Q ss_pred ecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccc-cCC-CCccEEEccccccccc
Q 007107 161 SRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFSGW 238 (618)
Q Consensus 161 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~l~~N~l~g~ 238 (618)
++|++++.+|..|.++++|+.|+|++|++.|.+|..+..+++|++|+|++|+++|.++. +.. .+|+.|+|++|+++|.
T Consensus 483 s~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 562 (968)
T PLN00113 483 SRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGE 562 (968)
T ss_pred cCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCccccc
Confidence 77777777777777777777777777777777777777777777777777777776654 222 3477777777777777
Q ss_pred Cchhhhc---ccchhccCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCcceeehhHHHH
Q 007107 239 IPRELIS---IRTFIYDGNSFDNGPAPPPPPSTAPPSGRSHNNRSHRQG---SHSPSGSQSSSSDKELPAGAIVGIVLGA 312 (618)
Q Consensus 239 ip~~~~~---l~~l~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---s~s~~~~~~~~~~~~~~~~~i~~~~~~~ 312 (618)
+|..+.+ |+.|++++|++.+.............+....+...+... ..+++.. ........+++++++++
T Consensus 563 ~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~----~~~~~~~~~~~~~~~~~ 638 (968)
T PLN00113 563 IPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKR----VRKTPSWWFYITCTLGA 638 (968)
T ss_pred CChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCcc----ccccceeeeehhHHHHH
Confidence 7766543 556677777776532211111111111111111111000 0001110 00111123344444444
Q ss_pred HHHHHHHHHHHHHHHHhccccccCCCCCCCCCCCCCCcccccccccccccccccccCCCCchhhHHHHHHhhcCCCcccc
Q 007107 313 VFLVALALLALYFCIRKNRRKVSGARSSAGSFPVSTNNMNTEMHEQRVKSVAAVTDLTPPPAEKLVIERVAKSGSLKKIK 392 (618)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (618)
++++++++++++++++|++++.+......+ .. ... ... .
T Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~---~~~--~~~----------~------ 677 (968)
T PLN00113 639 FLVLALVAFGFVFIRGRNNLELKRVENEDG--------------------TW---ELQ--FFD----------S------ 677 (968)
T ss_pred HHHHHHHHHHHHHHHhhhcccccccccccc--------------------cc---ccc--ccc----------c------
Confidence 333333333332222222111100000000 00 000 000 0
Q ss_pred CCCccceeehhhhhhhhcCCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCccc
Q 007107 393 SPITATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471 (618)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 471 (618)
......+ .+.....|.....||+|+||.||+|.. .+++.||+|+++..... ..+|++.+++++||||+
T Consensus 678 --~~~~~~~---~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~l~~l~HpnIv 746 (968)
T PLN00113 678 --KVSKSIT---INDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI------PSSEIADMGKLQHPNIV 746 (968)
T ss_pred --ccchhhh---HHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc------cHHHHHHHhhCCCCCcc
Confidence 0000011 122234566778999999999999987 47899999998643321 12457888999999999
Q ss_pred ccceEEeeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC
Q 007107 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (618)
Q Consensus 472 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~ 551 (618)
++++++.+.+..++||||+++|+|.++++ .++|..+.+++.|+++||+|||..+.++|+||||||+||+++.+
T Consensus 747 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~-------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~ 819 (968)
T PLN00113 747 KLIGLCRSEKGAYLIHEYIEGKNLSEVLR-------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGK 819 (968)
T ss_pred eEEEEEEcCCCCEEEEeCCCCCcHHHHHh-------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCC
Confidence 99999999999999999999999999995 37899999999999999999996555599999999999999999
Q ss_pred CCcEEeeccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 552 LNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 552 ~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+..++. ||........ ....||+.|+|||++.+..++.++|||||||++|||+||+.||+
T Consensus 820 ~~~~~~-~~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~ 879 (968)
T PLN00113 820 DEPHLR-LSLPGLLCTD-----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPAD 879 (968)
T ss_pred CceEEE-eccccccccC-----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCC
Confidence 888875 6655332211 22368899999999999999999999999999999999999985
No 2
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-46 Score=365.47 Aligned_cols=202 Identities=29% Similarity=0.487 Sum_probs=184.4
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
...+|...+.||+|+|++||+|+++ ++..||||.+.......+..+.+..|+++++.++|||||.+++++..++..|+|
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 3457888888999999999999876 489999999988766777788899999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC------CCcEEeecc
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE------LNPHLSDCG 560 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~------~~~kl~Dfg 560 (618)
||||.+|||.++++ ..+.+++.+++.++.|++.||++||++ +||||||||.|||++.. -.+||+|||
T Consensus 88 MEyC~gGDLs~yi~----~~~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFG 160 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIR----RRGRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFG 160 (429)
T ss_pred EEeCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccc
Confidence 99999999999998 456899999999999999999999999 99999999999999854 458999999
Q ss_pred ccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
+|+...+ .......+|++-|||||+++..+|+.|+|+||+|+|+|+|++|+.||+.
T Consensus 161 fAR~L~~--~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 161 FARFLQP--GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred hhhhCCc--hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 9998863 3445678999999999999999999999999999999999999999983
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-44 Score=370.76 Aligned_cols=218 Identities=52% Similarity=0.904 Sum_probs=193.2
Q ss_pred ccceeehhhhhhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccce
Q 007107 396 TATSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG 475 (618)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 475 (618)
....|++.++..++++|.....||+|+||.||+|...+|+.||||++....... ..+|..|++++.+++|||+|+++|
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlG 138 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLG 138 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEE
Confidence 445689999999999999999999999999999999999999999887544322 455999999999999999999999
Q ss_pred EEeeCC-eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCc
Q 007107 476 YCAEHG-QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNP 554 (618)
Q Consensus 476 ~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~ 554 (618)
||.+.+ +.+||+|||++|+|.++++..... .++|..|.+|+.++|+||+|||+.+.|.||||||||+|||+|+++++
T Consensus 139 yC~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~a 216 (361)
T KOG1187|consen 139 YCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNA 216 (361)
T ss_pred EEecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCE
Confidence 999998 599999999999999999843222 88999999999999999999999988889999999999999999999
Q ss_pred EEeeccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 555 HLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 555 kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
||+|||+|+..+.......+...||.+|+|||++..+..+.|+|||||||++.||+||+.|.+
T Consensus 217 KlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d 279 (361)
T KOG1187|consen 217 KLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVD 279 (361)
T ss_pred EccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccC
Confidence 999999997665422221111179999999999999999999999999999999999999876
No 4
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-44 Score=344.32 Aligned_cols=202 Identities=28% Similarity=0.439 Sum_probs=183.1
Q ss_pred hhcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccH-HHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSL-QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
..++|+..++||+|+||.||.++.++ ++.||+|++++..... .+.+..+.|..++.+++||+||+++-.|.+.+.+|+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 35679999999999999999997665 8999999998776533 366788999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
|+||+.||.|..+++ ..+.+++..++-++..|+.||.|||+. +||||||||+|||+|++|+++|+|||+++..
T Consensus 103 Vld~~~GGeLf~hL~----~eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~ 175 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQ----REGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKED 175 (357)
T ss_pred EEeccCCccHHHHHH----hcCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhc
Confidence 999999999999997 467899999999999999999999999 9999999999999999999999999999855
Q ss_pred CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... ..+..++||+.|||||++.+..|+..+|+||+|+++|||++|.+||.
T Consensus 176 ~~~~-~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~ 226 (357)
T KOG0598|consen 176 LKDG-DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFY 226 (357)
T ss_pred ccCC-CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCc
Confidence 4332 33445899999999999999999999999999999999999999996
No 5
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-44 Score=334.42 Aligned_cols=207 Identities=27% Similarity=0.425 Sum_probs=187.2
Q ss_pred hcCCcccceeccCccceEEEEE-EcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccce-EEeeCC-eEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAG-YCAEHG-QRLL 485 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~-~~~~~~-~~~l 485 (618)
..+|.+.++||+|.||+||++. ..+|..+|.|.++-...+.+..++...|+.++++++|||||++++ .+.++. .+++
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence 3467888899999999999995 568999999999988888888999999999999999999999998 344444 4899
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--ceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS--VVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
||||++.|+|.++++..+.....+++.++++++.|+++||.++|+.. ++ |+||||||.||+++.+|.|||.|||+++
T Consensus 98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r 176 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGLGR 176 (375)
T ss_pred HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchhHh
Confidence 99999999999999988888899999999999999999999999942 25 8999999999999999999999999999
Q ss_pred cCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.+... .....+.+|||.||+||.+.+..|++|+||||+||++|||+.=+.||.
T Consensus 177 ~l~s~-~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~ 229 (375)
T KOG0591|consen 177 FLSSK-TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFY 229 (375)
T ss_pred Hhcch-hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcc
Confidence 88653 445667899999999999999999999999999999999999999996
No 6
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-42 Score=353.98 Aligned_cols=202 Identities=37% Similarity=0.622 Sum_probs=178.9
Q ss_pred CCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC-eEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG-QRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~ 489 (618)
++...+.+|+|+||+||+|.+.....||+|++..........+.|.+|+.++.+++|||||+++|+|.++. ..++||||
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy 121 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY 121 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence 34445569999999999999985555999999877766666789999999999999999999999999987 79999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC-ceecCCCCCCeeecCCC-CcEEeeccccccCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS-VVHRNFKSANILLDDEL-NPHLSDCGLAALTPN 567 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-iiH~Dlkp~NiLl~~~~-~~kl~Dfgl~~~~~~ 567 (618)
|++|+|.++++.. ....+++..+.+++.|||+||+|||++ + ||||||||+|||++.++ ++||+|||+++....
T Consensus 122 ~~~GsL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 122 MPGGSLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVI 196 (362)
T ss_pred CCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecc
Confidence 9999999999743 367899999999999999999999999 7 99999999999999997 999999999987653
Q ss_pred CCccccccccccccccCccccc--cCCccccchhhhHHHHHHHHHhCCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFAL--SGIYTVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
.. ...+...||++|||||++. ...|+.|+||||||+++|||+||+.||+.
T Consensus 197 ~~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~ 248 (362)
T KOG0192|consen 197 SK-TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFED 248 (362)
T ss_pred cc-ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCC
Confidence 22 2333468999999999999 66999999999999999999999999974
No 7
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-43 Score=337.95 Aligned_cols=197 Identities=28% Similarity=0.492 Sum_probs=177.7
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC-eEEEEEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG-QRLLVYE 488 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e 488 (618)
+++....||+|..|+||++.++ +++.+|+|.+. ........+++.+|+++++..+||+||.+||.|..++ ...++||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~-~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVIL-LNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeec-ccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 4455678999999999999887 58899999994 3445667789999999999999999999999999999 5999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
||++|+|.+++. ..+.+++....+++.++++||.|||+.+ +||||||||+|||++..|+|||+|||.+....+.
T Consensus 159 YMDgGSLd~~~k----~~g~i~E~~L~~ia~~VL~GL~YLh~~~--~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 159 YMDGGSLDDILK----RVGRIPEPVLGKIARAVLRGLSYLHEER--KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS 232 (364)
T ss_pred hcCCCCHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHhhcc--CeeeccCCHHHeeeccCCCEEeccccccHHhhhh
Confidence 999999999997 3477999999999999999999999632 9999999999999999999999999999876543
Q ss_pred CccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
...+++||..|||||.+.+..|+.++||||||+.++|+.+|+.||-
T Consensus 233 ---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~ 278 (364)
T KOG0581|consen 233 ---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYP 278 (364)
T ss_pred ---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCC
Confidence 5567899999999999999999999999999999999999999984
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.8e-43 Score=341.99 Aligned_cols=202 Identities=28% Similarity=0.432 Sum_probs=176.0
Q ss_pred hhcCCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccccHH-----HHHHHHHHHHHhhcCCCCcccccceEEeeCC
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQ-----EEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (618)
..+.|...+.||+|+||.|-+|.. ++|+.||||++.+...... ......+|+++|++++|||||+++++++.++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 455688889999999999999954 5799999999986654332 2234579999999999999999999999999
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC---CCcEEee
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE---LNPHLSD 558 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~---~~~kl~D 558 (618)
..|+||||++||+|.+.+- ..+.+.+.....+++|++.|+.|||++ ||+||||||+|||+..+ ..+||+|
T Consensus 250 s~YmVlE~v~GGeLfd~vv----~nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItD 322 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVV----ANKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITD 322 (475)
T ss_pred ceEEEEEEecCccHHHHHH----hccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecc
Confidence 9999999999999999885 456677888899999999999999999 99999999999999755 7899999
Q ss_pred ccccccCCCCCccccccccccccccCccccccCC---ccccchhhhHHHHHHHHHhCCCCCCC
Q 007107 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFALSGI---YTVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 559 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
||+|+... +...+...+|||.|.|||++.+.. +..++|+||+||++|-+++|.+||.+
T Consensus 323 FGlAK~~g--~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~ 383 (475)
T KOG0615|consen 323 FGLAKVSG--EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSE 383 (475)
T ss_pred cchhhccc--cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCccc
Confidence 99998875 456677899999999999998654 33488999999999999999999964
No 9
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.4e-42 Score=352.12 Aligned_cols=201 Identities=27% Similarity=0.490 Sum_probs=183.0
Q ss_pred cCCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.+|...+.||+|||+.+|+++. ..|+.||+|++.+... +....+.+.+|+++.+.++|||||+++++|++....|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5788999999999999999987 6799999999976543 3445677889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
|+|..++|.++++ ..+.+++.+++.+..||+.||.|||+. +|+|||||-.|++++++.+|||+|||+|.....
T Consensus 98 ELC~~~sL~el~K----rrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 98 ELCHRGSLMELLK----RRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred EecCCccHHHHHH----hcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecC
Confidence 9999999999986 457899999999999999999999999 999999999999999999999999999988764
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
++. .....+|||.|.|||++....++..+||||+||+||.|++|++||+.
T Consensus 171 ~~E-rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFet 220 (592)
T KOG0575|consen 171 DGE-RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFET 220 (592)
T ss_pred ccc-ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCccc
Confidence 422 22357999999999999999999999999999999999999999973
No 10
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-41 Score=316.88 Aligned_cols=198 Identities=28% Similarity=0.431 Sum_probs=181.1
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
-.+|+..+.||.|+||+|.+++.+ +|..||+|++.+... ..+..+...+|..+++.+.||+++++++.+.+.+..++|
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 457888899999999999999876 488999999986543 445567788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||++||.|..+++ ..+++++..++-++.||+.||+|||++ +|++|||||+|||+|.+|++||+|||+|....
T Consensus 123 meyv~GGElFS~Lr----k~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~ 195 (355)
T KOG0616|consen 123 MEYVPGGELFSYLR----KSGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVS 195 (355)
T ss_pred EeccCCccHHHHHH----hcCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEec
Confidence 99999999999998 467899999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. ....+|||.|+|||++.+..|+.++|+|||||++|||+.|.+||-
T Consensus 196 ~r----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~ 242 (355)
T KOG0616|consen 196 GR----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFY 242 (355)
T ss_pred Cc----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCc
Confidence 32 346899999999999999999999999999999999999999995
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.1e-41 Score=318.93 Aligned_cols=199 Identities=25% Similarity=0.376 Sum_probs=178.0
Q ss_pred cCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
+.|+....+|+|+||+||++++++ |+.||||++.....+....+-.++|++++++++|+|+|.++++|......+||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 357788899999999999999876 9999999998877666667778999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|++..-|.++-+ ....++...+.+++.|++.|+.|+|++ ++|||||||+||||+.+|.+||+|||+|+.....
T Consensus 82 ~~dhTvL~eLe~----~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p 154 (396)
T KOG0593|consen 82 YCDHTVLHELER----YPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAP 154 (396)
T ss_pred ecchHHHHHHHh----ccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCC
Confidence 998755555443 566789999999999999999999999 9999999999999999999999999999988754
Q ss_pred CccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf 616 (618)
.. ..+.++.|..|+|||.+.+ .+|+..+||||+||++.||++|++-|
T Consensus 155 gd-~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~ 202 (396)
T KOG0593|consen 155 GD-NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLW 202 (396)
T ss_pred cc-hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCC
Confidence 33 3356789999999999998 78999999999999999999998765
No 12
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3e-41 Score=336.64 Aligned_cols=205 Identities=30% Similarity=0.446 Sum_probs=182.9
Q ss_pred hhhhcCCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC--Ce
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQ 482 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~ 482 (618)
....+.|+.+++||+|.||.||+|+. .+|+.||+|++...........-..+||.+++++.||||+++.+...+. +.
T Consensus 113 ~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~s 192 (560)
T KOG0600|consen 113 PRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGS 192 (560)
T ss_pred ccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCce
Confidence 34456788999999999999999965 5699999999987766666677789999999999999999999999877 68
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccc
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~ 562 (618)
+|+|+|||+. ||.-++. ...-.+++.++..++.|++.||+|+|++ +|+|||||.+|||||++|.+||+|||+|
T Consensus 193 iYlVFeYMdh-DL~GLl~---~p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLA 265 (560)
T KOG0600|consen 193 IYLVFEYMDH-DLSGLLS---SPGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLA 265 (560)
T ss_pred EEEEEecccc-hhhhhhc---CCCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccce
Confidence 9999999976 8877775 3455799999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 563 ALTPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+.+........+..+-|..|+|||.+.+. .|+.++|+||.||||.||++|++.|.
T Consensus 266 r~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~ 321 (560)
T KOG0600|consen 266 RFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQ 321 (560)
T ss_pred eeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcC
Confidence 98876666656778899999999999885 59999999999999999999999885
No 13
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-41 Score=340.83 Aligned_cols=202 Identities=31% Similarity=0.502 Sum_probs=180.6
Q ss_pred hhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
..+.+...+.||+|.||.||.|.+.....||+|.++.... ..+.|.+|+++|++++|++||+++++|..++.++|||
T Consensus 204 ~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m---~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVt 280 (468)
T KOG0197|consen 204 PREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM---SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVT 280 (468)
T ss_pred cHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEecccc---ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEE
Confidence 3445566778999999999999999888999999986543 3577899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
|||+.|+|.++++. .....+...+.+.++.|||+||+||+++ ++|||||.++||||+++..+||+|||+|+...+
T Consensus 281 E~m~~GsLl~yLr~--~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d 355 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRT--REGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGD 355 (468)
T ss_pred EecccCcHHHHhhh--cCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCC
Confidence 99999999999985 3467788999999999999999999999 999999999999999999999999999996655
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
+.........-+..|.|||.+...+++.|||||||||+||||+| |+.|+.
T Consensus 356 ~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~ 406 (468)
T KOG0197|consen 356 DEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYP 406 (468)
T ss_pred CceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCC
Confidence 55545555566779999999999999999999999999999999 999875
No 14
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.2e-40 Score=334.94 Aligned_cols=198 Identities=31% Similarity=0.476 Sum_probs=184.4
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
++|...+.||+|.||+||||+.+ +.+.||+|.+.+.....++.+.+++|+++++.++||||+.++++|+...+.++|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 46778889999999999999766 48899999998887788888999999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+.+ +|+.++. ..+.++++.+..++.+++.||.|||+. +|+|||+||.|||++.++++|++|||+|+.+..
T Consensus 82 ~a~g-~L~~il~----~d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~- 152 (808)
T KOG0597|consen 82 YAVG-DLFTILE----QDGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST- 152 (808)
T ss_pred hhhh-hHHHHHH----hccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc-
Confidence 9977 9999997 578899999999999999999999999 999999999999999999999999999998754
Q ss_pred CccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf 616 (618)
....-+.+.|||-|||||.+.+..|+..+|+||+|||+|||++|++||
T Consensus 153 ~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF 200 (808)
T KOG0597|consen 153 NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPF 200 (808)
T ss_pred CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCc
Confidence 445566788999999999999999999999999999999999999998
No 15
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=4.7e-40 Score=303.18 Aligned_cols=199 Identities=26% Similarity=0.393 Sum_probs=177.5
Q ss_pred cCCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
.+|...+.+|+|.||.||+|+. ..|+.||||+++.......-.....+|++.++.++|+||+.++++|...+...||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 4688889999999999999965 469999999999876665556678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
||+. +|+..++ .....++..++..++.++++|++|||++ .|+||||||.|+|++++|.+||+|||+++.+...
T Consensus 82 fm~t-dLe~vIk---d~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 82 FMPT-DLEVVIK---DKNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred eccc-cHHHHhc---ccccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 9975 9999886 4566789999999999999999999999 8999999999999999999999999999988766
Q ss_pred CccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf 616 (618)
...... .+-|..|+|||.+.+ +.|+..+||||.|||+.||+-|.+-|
T Consensus 155 ~~~~~~-~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~f 202 (318)
T KOG0659|consen 155 NRIQTH-QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFF 202 (318)
T ss_pred Cccccc-ceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCC
Confidence 544433 377899999999987 56999999999999999999987765
No 16
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.7e-40 Score=347.45 Aligned_cols=206 Identities=31% Similarity=0.518 Sum_probs=178.6
Q ss_pred hhcCCcccceeccCccceEEEEEEc------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (618)
...+....+.||+|+||.||+|+.. +...||||.+++.. ..+..++|++|++++..++|||||+++|+|.+++
T Consensus 484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a-~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~ 562 (774)
T KOG1026|consen 484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA-ENQARQDFRREAELLAELQHPNIVRLLGVCREGD 562 (774)
T ss_pred chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc-cHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC
Confidence 3445566778999999999999754 34679999998765 5557889999999999999999999999999999
Q ss_pred eEEEEEEecCCCChhhhhhcccC------C----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADD------S----SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~------~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~ 551 (618)
.+++|+|||..|||.+|++.... . ..+++..+.+.||.|||.||+||-++ .+|||||.++|+||.++
T Consensus 563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGEN 639 (774)
T ss_pred eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccc
Confidence 99999999999999999975322 1 23488999999999999999999999 89999999999999999
Q ss_pred CCcEEeeccccccCCCCCccccc-cccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 552 LNPHLSDCGLAALTPNTERQVST-QMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 552 ~~~kl~Dfgl~~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
..|||+|||+++..-..+.+... ...-+++|||||.|..++|+.+||||||||+|||+++ |+.|+.
T Consensus 640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~ 707 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYY 707 (774)
T ss_pred eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCccc
Confidence 99999999999866544443332 3456789999999999999999999999999999999 999874
No 17
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-40 Score=330.50 Aligned_cols=205 Identities=27% Similarity=0.427 Sum_probs=179.1
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHH-HHHHHHHHHHhhcC-CCCcccccceEEeeCCeE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQE-EDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~-~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 483 (618)
....+|...++||+|+|++|++|... .+++||||++.+...-.+. .+....|-..|.++ .||.|++++-.|.++..+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 34567888999999999999999655 5999999999766543322 34556777888888 899999999999999999
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
|+|+||+++|+|.++++ ..+.+++...+.++.+|+.||+|||++ |||||||||+|||+|+|+++||+|||.|.
T Consensus 150 YFvLe~A~nGdll~~i~----K~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK 222 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIK----KYGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAK 222 (604)
T ss_pred EEEEEecCCCcHHHHHH----HhCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccc
Confidence 99999999999999997 457899999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCcc------------ccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCCC
Q 007107 564 LTPNTERQ------------VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 564 ~~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
.+.+.... ....++||..|.+||++.....++.+|+|+||||+|+|+.|++||..
T Consensus 223 ~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra 289 (604)
T KOG0592|consen 223 ILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRA 289 (604)
T ss_pred cCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcc
Confidence 66432211 11458999999999999999999999999999999999999999963
No 18
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.2e-39 Score=326.28 Aligned_cols=203 Identities=26% Similarity=0.383 Sum_probs=178.1
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
..++|+....||+|+||.||+|+-+ .|+.+|+|++++... ...+....+.|-.+|....+|.||+++-.|.+.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 5678999999999999999999765 499999999987643 34455678888889999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||++||++..++. ..+.+++..++.++.+++-|++-+|+. |+|||||||+|+|||..|++||+|||++...
T Consensus 219 iMEylPGGD~mTLL~----~~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl 291 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLM----RKDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGL 291 (550)
T ss_pred EEEecCCccHHHHHH----hcCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchh
Confidence 999999999999996 467899999999999999999999999 9999999999999999999999999998421
Q ss_pred CC-----------------------CCc-----------------------cccccccccccccCccccccCCccccchh
Q 007107 566 PN-----------------------TER-----------------------QVSTQMVGAFGYSAPEFALSGIYTVKSDV 599 (618)
Q Consensus 566 ~~-----------------------~~~-----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv 599 (618)
.. +.. ......+|||.|||||++.+..|+..+|+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDw 371 (550)
T KOG0605|consen 292 DKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDW 371 (550)
T ss_pred hhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccH
Confidence 10 000 00113589999999999999999999999
Q ss_pred hhHHHHHHHHHhCCCCCC
Q 007107 600 YSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 600 wSlG~il~elltg~~Pf~ 617 (618)
||||||||||+.|.+||.
T Consensus 372 WSLG~ImyEmLvGyPPF~ 389 (550)
T KOG0605|consen 372 WSLGCIMYEMLVGYPPFC 389 (550)
T ss_pred HHHHHHHHHHHhCCCCCC
Confidence 999999999999999995
No 19
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-38 Score=327.27 Aligned_cols=204 Identities=33% Similarity=0.512 Sum_probs=179.5
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCccccc---HHHHHHHHHHHHHhhcCC-CCcccccceEEeeCC
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS---LQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHG 481 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~ 481 (618)
.....|...+.||+|+||.|++|.+. .|+.||+|.+...... ....+.+.+|+.++++++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 34568899999999999999999654 6899999977654221 123556678999999999 999999999999999
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC-CCcEEeecc
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE-LNPHLSDCG 560 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~-~~~kl~Dfg 560 (618)
..++||||+.+|+|.+++. ..+++.+.++..++.|++.|++|||++ +|+||||||+|||++.+ +++||+|||
T Consensus 94 ~~~ivmEy~~gGdL~~~i~----~~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG 166 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIV----NKGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFG 166 (370)
T ss_pred eEEEEEEecCCccHHHHHH----HcCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccc
Confidence 9999999999999999997 357888999999999999999999999 99999999999999998 999999999
Q ss_pred ccccCCCCCccccccccccccccCccccccCC-cc-ccchhhhHHHHHHHHHhCCCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSGI-YT-VKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
++.... .........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||++
T Consensus 167 ~s~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d 225 (370)
T KOG0583|consen 167 LSAISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD 225 (370)
T ss_pred cccccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC
Confidence 998775 2334456689999999999999987 85 789999999999999999999985
No 20
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-38 Score=318.55 Aligned_cols=207 Identities=28% Similarity=0.443 Sum_probs=179.1
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
.+.+.......+.||+|.||.|.+++...+..||||.++... ......+|.+|+++|.+++||||++++|+|..++.++
T Consensus 533 ~EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a-~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePic 611 (807)
T KOG1094|consen 533 VEFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDA-TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLC 611 (807)
T ss_pred hhcchhheehhhhhcCcccceeEEEEecCceEEEEeecCccc-chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchH
Confidence 345566778888999999999999999888999999998765 3445689999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+|+|||++|+|.+|+...... ..+-....+|+.||+.||+||.+. ++|||||.++|+|++.++++||+|||+++.
T Consensus 612 mI~EYmEnGDLnqFl~aheap--t~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~ 686 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHELP--TAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRN 686 (807)
T ss_pred HHHHHHhcCcHHHHHHhccCc--ccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccc
Confidence 999999999999999744322 245556677999999999999999 999999999999999999999999999986
Q ss_pred CCCCCcccc-ccccccccccCccccccCCccccchhhhHHHHHHHHHh--CCCCCC
Q 007107 565 TPNTERQVS-TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT--GRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt--g~~Pf~ 617 (618)
.-..+.+.. ...+-+.+|||+|.+.-++++.++|||+||+++||+++ .+.||.
T Consensus 687 lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~ 742 (807)
T KOG1094|consen 687 LYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYS 742 (807)
T ss_pred cccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchh
Confidence 544444332 33466789999999999999999999999999999887 778875
No 21
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-39 Score=319.28 Aligned_cols=198 Identities=26% Similarity=0.423 Sum_probs=174.6
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-CCcccccceEEeeCC-eEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHG-QRLL 485 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~-~~~l 485 (618)
.++|...+.||.|.||.||+|+.. .|+.||||+++....+.++. .=++|++.+++++ ||||+++.+++.+.+ .+++
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~-~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEEC-MNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHH-HHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 467888999999999999999765 58999999999887775444 3468899999998 999999999999988 9999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
|||||+. +|.++++. .+..+++..+..|+.||++||+|+|++ |+.|||+||+|||+.....+||+|||+||..
T Consensus 88 VfE~Md~-NLYqLmK~---R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 88 VFEFMDC-NLYQLMKD---RNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREV 160 (538)
T ss_pred eHHhhhh-hHHHHHhh---cCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccc
Confidence 9999975 99999973 367899999999999999999999999 9999999999999998889999999999988
Q ss_pred CCCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf 616 (618)
.+...+ +.++.|..|+|||++.. ..|+.+.||||+|||++|+.+=++-|
T Consensus 161 ~SkpPY--TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLF 210 (538)
T KOG0661|consen 161 RSKPPY--TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLF 210 (538)
T ss_pred ccCCCc--chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccC
Confidence 654433 56789999999999864 67899999999999999999866655
No 22
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-38 Score=327.44 Aligned_cols=202 Identities=25% Similarity=0.412 Sum_probs=178.1
Q ss_pred hhhcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 483 (618)
...++|....+||+|.||.|+++..+. ++.||||.+++... ...+.+..+.|..++... +||.+++++..|.+.+++
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 345689999999999999999998874 88999999987654 444556677777776665 599999999999999999
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++||||+.||++..+.+ ...+++..+.-++..|+.||.|||++ +||+||||-+|||+|.+|++||+|||+++
T Consensus 445 ~fvmey~~Ggdm~~~~~-----~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcK 516 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHIH-----TDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCK 516 (694)
T ss_pred EEEEEecCCCcEEEEEe-----cccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEeccccccc
Confidence 99999999999655443 57899999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..-..+. .+..++|||.|||||++.+..|+..+|+|||||+||||+.|+.||.
T Consensus 517 e~m~~g~-~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~ 569 (694)
T KOG0694|consen 517 EGMGQGD-RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFP 569 (694)
T ss_pred ccCCCCC-ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCC
Confidence 6543333 4556899999999999999999999999999999999999999996
No 23
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-38 Score=323.12 Aligned_cols=198 Identities=27% Similarity=0.462 Sum_probs=177.4
Q ss_pred hhcCCcccceeccCccceEEEEE-EcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
....|.....||+|+.|.||.|. ...++.||||++..... ...+-+.+|+.+|+..+|+|||.+++.|...+.+|.|
T Consensus 271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q--~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV 348 (550)
T KOG0578|consen 271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQ--PKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV 348 (550)
T ss_pred hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccC--CchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence 34567777889999999999995 45689999999975442 2456678999999999999999999999989999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
||||++|+|.+.+. ...+++.++..|++++++||+|||.+ +|+|||||.+|||++.+|.+||+|||++..+.
T Consensus 349 MEym~ggsLTDvVt-----~~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~ 420 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVT-----KTRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQIS 420 (550)
T ss_pred EeecCCCchhhhhh-----cccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccc
Confidence 99999999999985 45699999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf 616 (618)
.... .....+|||+|||||++....|++|+||||||++++||+-|++||
T Consensus 421 ~~~~-KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPY 469 (550)
T KOG0578|consen 421 EEQS-KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPY 469 (550)
T ss_pred cccC-ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCc
Confidence 5443 445679999999999999999999999999999999999999998
No 24
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-38 Score=289.92 Aligned_cols=203 Identities=28% Similarity=0.403 Sum_probs=181.9
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
...++|++.+.||+|.||.||.|+.+ ++-.||+|++.+... ..+.+.++++|+++.+.++||||++++++|.+....|
T Consensus 19 ~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riy 98 (281)
T KOG0580|consen 19 WTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIY 98 (281)
T ss_pred cchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeE
Confidence 34567899999999999999999765 578999999876543 3445688999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
|++||...|.+...++.. ....+++.....++.|+|.|+.|+|.. +||||||||+|+|++..+.+||+|||++..
T Consensus 99 LilEya~~gel~k~L~~~--~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~ 173 (281)
T KOG0580|consen 99 LILEYAPRGELYKDLQEG--RMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVH 173 (281)
T ss_pred EEEEecCCchHHHHHHhc--ccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceee
Confidence 999999999999999733 345688888999999999999999999 999999999999999999999999999977
Q ss_pred CCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.+ .......+||..|.+||+..+..++..+|+|++|++.||++.|.+||+
T Consensus 174 ~p---~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFe 223 (281)
T KOG0580|consen 174 AP---SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFE 223 (281)
T ss_pred cC---CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchh
Confidence 65 233456899999999999999999999999999999999999999997
No 25
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.8e-38 Score=307.40 Aligned_cols=202 Identities=27% Similarity=0.437 Sum_probs=183.4
Q ss_pred hhcCCcccceeccCccceEEEEE-EcCCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
...+|++.+.||+|.||.|-+|. +..|+.||||.+++... +.++.-.+++|+++|+.++||||+.++++|+..+.+++
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvi 130 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVI 130 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEE
Confidence 44578888999999999999995 47899999999987665 34455678999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||..+|.|.+++. ..+.+++.+++.|+.||+.|+.|+|++ +++|||||-+|||+|.++++||+|||++-.+
T Consensus 131 vMEYaS~GeLYDYiS----er~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly 203 (668)
T KOG0611|consen 131 VMEYASGGELYDYIS----ERGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLY 203 (668)
T ss_pred EEEecCCccHHHHHH----HhccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhh
Confidence 999999999999997 467899999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCccccccccccccccCccccccCCc-cccchhhhHHHHHHHHHhCCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
.. ...-..++|++-|.+||++.+..| ++.+|-|||||+||.|+.|..|||.
T Consensus 204 ~~--~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG 255 (668)
T KOG0611|consen 204 AD--KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDG 255 (668)
T ss_pred cc--ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCC
Confidence 54 334456899999999999999998 5889999999999999999999983
No 26
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-38 Score=307.52 Aligned_cols=205 Identities=27% Similarity=0.437 Sum_probs=179.1
Q ss_pred hhcCCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
-.++|+..+.||.|..++||+|+. +.++.||||++........ .+.+++|+..|+.++||||++++..|..+..+|+|
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence 456788999999999999999965 4689999999987665443 68899999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|.||.+|++.++++..- ...+++..+..|.+++++||.|||++ |.||||||+.||||+.+|.|||+|||.+..+.
T Consensus 103 mpfMa~GS~ldIik~~~--~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~ 177 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYY--PDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLF 177 (516)
T ss_pred ehhhcCCcHHHHHHHHc--cccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeec
Confidence 99999999999997543 34599999999999999999999999 99999999999999999999999999875443
Q ss_pred CCCc-c-cc-ccccccccccCcccccc--CCccccchhhhHHHHHHHHHhCCCCCCC
Q 007107 567 NTER-Q-VS-TQMVGAFGYSAPEFALS--GIYTVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 567 ~~~~-~-~~-~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
.... . .. ...+||+.|||||+++. ..|+.|+||||||+...||.+|+.||.+
T Consensus 178 ~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k 234 (516)
T KOG0582|consen 178 DSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSK 234 (516)
T ss_pred ccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCccc
Confidence 3221 1 11 45689999999999754 4599999999999999999999999974
No 27
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-38 Score=311.14 Aligned_cols=201 Identities=32% Similarity=0.498 Sum_probs=171.2
Q ss_pred hcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC--eEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG--QRLL 485 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~l 485 (618)
..+|...+.||+|+||.||++...+ |+.+|||.+...... ..+.+.+|+.++.+++|||||+++|...... .+++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~--~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSP--TSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccch--hHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence 3457778899999999999998765 899999998765211 2667899999999999999999999855544 6899
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC-CCCcEEeecccccc
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-ELNPHLSDCGLAAL 564 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~-~~~~kl~Dfgl~~~ 564 (618)
.|||+++|+|.+++... ++.+++..++.+..||++||+|||++ +||||||||+|||++. ++.+||+|||++..
T Consensus 94 ~mEy~~~GsL~~~~~~~---g~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~ 167 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRY---GGKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKK 167 (313)
T ss_pred eeeccCCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccc
Confidence 99999999999999732 22799999999999999999999999 9999999999999999 79999999999987
Q ss_pred CCC--CCccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 565 TPN--TERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 565 ~~~--~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... ..........||+.|||||++..+ ...+++|||||||++.||+||+.||.
T Consensus 168 ~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~ 223 (313)
T KOG0198|consen 168 LESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWS 223 (313)
T ss_pred cccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcch
Confidence 653 222233457899999999999964 34469999999999999999999985
No 28
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.1e-38 Score=322.34 Aligned_cols=200 Identities=30% Similarity=0.452 Sum_probs=178.9
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcc-cccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNA-ALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.-|...+.||+|+.|.|-+|++. .|+..|||++.+. .........+.+|+-+|+.+.||||+++|+++++..++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 34677888999999999999765 6999999999765 334344567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++|-|++++. ..+++++.++.+++.||+.|+.|+|.. +|+||||||+|+|+|..+.+||+|||+|....+
T Consensus 92 Eyv~gGELFdylv----~kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~ 164 (786)
T KOG0588|consen 92 EYVPGGELFDYLV----RKGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEVP 164 (786)
T ss_pred EecCCchhHHHHH----hhCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecccC
Confidence 9999999999996 568899999999999999999999999 999999999999999999999999999976543
Q ss_pred CCccccccccccccccCccccccCCc-cccchhhhHHHHHHHHHhCCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
+..-...||.|.|.|||++++.+| +.++||||.|||||.|+||+.||++
T Consensus 165 --gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD 214 (786)
T KOG0588|consen 165 --GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD 214 (786)
T ss_pred --CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC
Confidence 333455799999999999999999 5789999999999999999999985
No 29
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.4e-38 Score=298.08 Aligned_cols=202 Identities=27% Similarity=0.389 Sum_probs=174.7
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC--CeEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQRL 484 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 484 (618)
..++|+....|++|+||.||+|+.+ +++.||+|+++-......-.-.-++|+.++.+++|||||.+.++.... +..|
T Consensus 74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 3456888899999999999999765 589999999985543333334568999999999999999999988654 5799
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+|||||+. +|..+++. ..+++...++..+..|+++|++|||.+ .|+||||||+|+|+++.|.+||+|||+||.
T Consensus 154 ~VMe~~Eh-DLksl~d~---m~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ 226 (419)
T KOG0663|consen 154 IVMEYVEH-DLKSLMET---MKQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLARE 226 (419)
T ss_pred eeHHHHHh-hHHHHHHh---ccCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhh
Confidence 99999976 99999973 457899999999999999999999999 899999999999999999999999999998
Q ss_pred CCCCCccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+.++... .+..+-|..|+|||.+.+. .|+..+|+||+|||+.||+++++-|.
T Consensus 227 ygsp~k~-~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~ 279 (419)
T KOG0663|consen 227 YGSPLKP-YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFP 279 (419)
T ss_pred hcCCccc-CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCC
Confidence 8766433 3556789999999999875 59999999999999999999988774
No 30
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2e-38 Score=318.76 Aligned_cols=190 Identities=28% Similarity=0.504 Sum_probs=169.2
Q ss_pred cCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+.....+.||.|+.|.||+|++. ++.||||+++.- -..+|+-+++++||||+.+.|+|.....++|||||
T Consensus 124 e~IsELeWlGSGaQGAVF~Grl~-netVAVKKV~el---------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEf 193 (904)
T KOG4721|consen 124 EEISELEWLGSGAQGAVFLGRLH-NETVAVKKVREL---------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEF 193 (904)
T ss_pred HHhhhhhhhccCcccceeeeecc-CceehhHHHhhh---------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeec
Confidence 33445667999999999999986 788999988532 12468889999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
|..|-|.++++ .+..+.......+..+||.|+.|||.. +|||||||+-||||+.+..|||+|||-++.....
T Consensus 194 Ca~GqL~~VLk----a~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~- 265 (904)
T KOG4721|consen 194 CAQGQLYEVLK----AGRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK- 265 (904)
T ss_pred cccccHHHHHh----ccCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh-
Confidence 99999999997 567888999999999999999999999 9999999999999999999999999998766433
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
...-.++||..|||||++.....++|+||||||||||||+||+.||.+
T Consensus 266 -STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkd 313 (904)
T KOG4721|consen 266 -STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKD 313 (904)
T ss_pred -hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccc
Confidence 233457999999999999999999999999999999999999999974
No 31
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=7.7e-37 Score=319.70 Aligned_cols=201 Identities=25% Similarity=0.373 Sum_probs=174.2
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
++|+..+.||+|+||.||+|... +++.||+|++..... .......+.+|++++.+++||||+++++.+.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 36888899999999999999765 588999999975432 2233457788999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||+++....
T Consensus 81 E~~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~ 153 (363)
T cd05628 81 EFLPGGDMMTLLM----KKDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK 153 (363)
T ss_pred cCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence 9999999999986 345789999999999999999999999 999999999999999999999999999875432
Q ss_pred CCc----------------------------------cccccccccccccCccccccCCccccchhhhHHHHHHHHHhCC
Q 007107 568 TER----------------------------------QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGR 613 (618)
Q Consensus 568 ~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~ 613 (618)
... ......+||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~ 233 (363)
T cd05628 154 AHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (363)
T ss_pred cccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCC
Confidence 110 0112357999999999999999999999999999999999999
Q ss_pred CCCC
Q 007107 614 KPLD 617 (618)
Q Consensus 614 ~Pf~ 617 (618)
.||.
T Consensus 234 ~Pf~ 237 (363)
T cd05628 234 PPFC 237 (363)
T ss_pred CCCC
Confidence 9996
No 32
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=7e-38 Score=325.89 Aligned_cols=201 Identities=28% Similarity=0.477 Sum_probs=176.4
Q ss_pred hcCCcccceeccCccceEEEEEEcC----CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
.....++++||.|.||.|++|+++- ...||||.++... ..+...+|+.|+.+|.+++||||+++-|+.......+
T Consensus 628 ~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy-tekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvM 706 (996)
T KOG0196|consen 628 PSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVM 706 (996)
T ss_pred hhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc-cHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeE
Confidence 3456678899999999999998763 4569999998665 4556788999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+|+|||++|+|..|++. ..+.+.+.+...+.++|+.|+.||-++ ++|||||.++|||++.+..+|++|||++|.
T Consensus 707 IiTEyMENGsLDsFLR~---~DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRv 780 (996)
T KOG0196|consen 707 IITEYMENGSLDSFLRQ---NDGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRV 780 (996)
T ss_pred EEhhhhhCCcHHHHHhh---cCCceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceee
Confidence 99999999999999985 456799999999999999999999999 999999999999999999999999999998
Q ss_pred CCCCCcccccc--ccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCC
Q 007107 565 TPNTERQVSTQ--MVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPL 616 (618)
Q Consensus 565 ~~~~~~~~~~~--~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf 616 (618)
..++.....+. .--+.+|.|||.+..++++.++|||||||+|||.++ |++|+
T Consensus 781 ledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPY 835 (996)
T KOG0196|consen 781 LEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 835 (996)
T ss_pred cccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcc
Confidence 75443222222 233469999999999999999999999999999887 99997
No 33
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-36 Score=308.81 Aligned_cols=207 Identities=29% Similarity=0.487 Sum_probs=181.2
Q ss_pred hhhhhhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC
Q 007107 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (618)
Q Consensus 402 ~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (618)
..+++...+++...+.||+|.||+||+|+|- ..||||++.......+..+.|+.|+..+++-+|.||+-+.|+|..++
T Consensus 384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~ 461 (678)
T KOG0193|consen 384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP 461 (678)
T ss_pred ccccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence 3566777778888999999999999999984 56899999988888888999999999999999999999999999887
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccc
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl 561 (618)
. .+|+.+|++.+|+.++|.. ..+++..+.+.|++||++|+.|||.+ +|||||||+.||++.++++|||.|||+
T Consensus 462 ~-AIiTqwCeGsSLY~hlHv~---etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGL 534 (678)
T KOG0193|consen 462 L-AIITQWCEGSSLYTHLHVQ---ETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGL 534 (678)
T ss_pred e-eeeehhccCchhhhhccch---hhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccc
Confidence 7 9999999999999999854 36788999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCC-CccccccccccccccCcccccc---CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNT-ERQVSTQMVGAFGYSAPEFALS---GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+..-..- .........|...|||||+++. .+|++.+||||||+++|||+||..||.
T Consensus 535 atvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys 594 (678)
T KOG0193|consen 535 ATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS 594 (678)
T ss_pred eeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC
Confidence 8543211 1111223467889999999974 458999999999999999999999985
No 34
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=9.7e-37 Score=318.87 Aligned_cols=205 Identities=24% Similarity=0.352 Sum_probs=176.1
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCe
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (618)
+....++|+..+.||+|+||.||++... +++.+|+|.+..... .......+.+|+.+++.++||||+++++++.+++.
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY 117 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 3445678999999999999999999876 478999999864322 22344567899999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccc
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~ 562 (618)
.++||||+++|+|.++++ ...+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||++
T Consensus 118 ~~lv~Ey~~gg~L~~~l~-----~~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a 189 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMS-----NYDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTC 189 (370)
T ss_pred EEEEEcCCCCCcHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccc
Confidence 999999999999999985 23578889999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCccccccccccccccCccccccCC----ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 563 ALTPNTERQVSTQMVGAFGYSAPEFALSGI----YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
...............||+.|+|||++.+.. ++.++||||+||++|||++|+.||.
T Consensus 190 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~ 248 (370)
T cd05621 190 MKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFY 248 (370)
T ss_pred eecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCC
Confidence 766433322234567999999999997543 7889999999999999999999996
No 35
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.8e-36 Score=307.17 Aligned_cols=197 Identities=26% Similarity=0.368 Sum_probs=174.0
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
++|+..+.||+|+||.||+|... +|+.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36788899999999999999876 589999999865432 2234567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++|+|.++++ ....+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 81 EYVPGGELFSYLR----NSGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred eCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence 9999999999986 345688999999999999999999999 999999999999999999999999999876543
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. ....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 154 ~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~ 199 (291)
T cd05612 154 RT----WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFF 199 (291)
T ss_pred Cc----ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 21 23578999999999999999999999999999999999999995
No 36
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.2e-36 Score=294.95 Aligned_cols=204 Identities=27% Similarity=0.391 Sum_probs=172.5
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCc-ccccceEEeeCC-----
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN-IVTLAGYCAEHG----- 481 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~----- 481 (618)
...|...++||+|+||+||+|+.. +|+.||+|++..............+|+.+++.++|+| |+.+++++....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 345667778999999999999765 5899999999765433223455689999999999999 999999998877
Q ss_pred -eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecc
Q 007107 482 -QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (618)
Q Consensus 482 -~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfg 560 (618)
..++|+||++. +|..++.........++...+..++.||++||+|||++ +|+||||||.||||+++|.+||+|||
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccc
Confidence 78999999965 99999975443325677789999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+|+...-+... .+..++|..|+|||++.+. .|+..+||||+|||++||++++.-|.
T Consensus 166 lAra~~ip~~~-yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFp 222 (323)
T KOG0594|consen 166 LARAFSIPMRT-YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFP 222 (323)
T ss_pred hHHHhcCCccc-ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCC
Confidence 99866433222 2446789999999999886 68999999999999999999988774
No 37
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.8e-38 Score=301.73 Aligned_cols=198 Identities=28% Similarity=0.401 Sum_probs=168.2
Q ss_pred hhcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC-----
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG----- 481 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 481 (618)
..-.|...+++|.|+||.||+|...+ ++.||||++-... +.-.+|+++|++++|||||++.-+|....
T Consensus 22 ~~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~------r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~ 95 (364)
T KOG0658|consen 22 VEISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK------RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEV 95 (364)
T ss_pred eEEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC------CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchh
Confidence 34467778899999999999998764 6899999985432 22347899999999999999988876532
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC-CCcEEeecc
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE-LNPHLSDCG 560 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~-~~~kl~Dfg 560 (618)
...+|||||+. +|.++++.....+..++.-.+.-+..||.+||+|||+. +|+||||||.|+|+|.+ |.+||+|||
T Consensus 96 ~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFG 171 (364)
T KOG0658|consen 96 YLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFG 171 (364)
T ss_pred HHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCC
Confidence 23589999976 99999986656678889899999999999999999998 99999999999999965 999999999
Q ss_pred ccccCCCCCccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.|+.....+.. .++..|..|+|||.+.+. .|+.+.||||.|||+.||+-|++-|.
T Consensus 172 SAK~L~~~epn--iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFp 227 (364)
T KOG0658|consen 172 SAKVLVKGEPN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFP 227 (364)
T ss_pred cceeeccCCCc--eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccC
Confidence 99887655444 456789999999999885 59999999999999999999998774
No 38
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.1e-36 Score=318.37 Aligned_cols=200 Identities=24% Similarity=0.320 Sum_probs=172.4
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
.|+..+.||+|+||.||+|... +++.||+|++..... .......+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5778889999999999999765 588999999975432 23345678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++++||+|||++......
T Consensus 82 ~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 82 YIPGGDMMSLLIR----MEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred cCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 9999999999862 35688999999999999999999999 9999999999999999999999999997532100
Q ss_pred C----------------------------------------------ccccccccccccccCccccccCCccccchhhhH
Q 007107 569 E----------------------------------------------RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSF 602 (618)
Q Consensus 569 ~----------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSl 602 (618)
. .......+||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV 234 (381)
T ss_pred cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence 0 001123579999999999999899999999999
Q ss_pred HHHHHHHHhCCCCCC
Q 007107 603 GVVMLELLTGRKPLD 617 (618)
Q Consensus 603 G~il~elltg~~Pf~ 617 (618)
||++|||+||+.||.
T Consensus 235 G~il~elltG~~Pf~ 249 (381)
T cd05626 235 GVILFEMLVGQPPFL 249 (381)
T ss_pred hhHHHHHHhCCCCCc
Confidence 999999999999995
No 39
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-36 Score=294.99 Aligned_cols=192 Identities=31% Similarity=0.490 Sum_probs=160.9
Q ss_pred CcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhh--cCCCCcccccceEEeeCC----eEEE
Q 007107 412 FSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMS--RLRHPNIVTLAGYCAEHG----QRLL 485 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~--~l~h~niv~l~~~~~~~~----~~~l 485 (618)
....+.+|+|.||.||+|.+. ++.||||++. .++.+.|..|-.+.+ .++|+||++++++-.... +++|
T Consensus 212 l~l~eli~~Grfg~V~KaqL~-~~~VAVKifp-----~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL 285 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQLD-NRLVAVKIFP-----EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL 285 (534)
T ss_pred hhhHHHhhcCccceeehhhcc-CceeEEEecC-----HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence 345568999999999999986 5999999995 455677877766655 468999999999876554 8899
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC------CCCceecCCCCCCeeecCCCCcEEeec
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC------LPSVVHRNFKSANILLDDELNPHLSDC 559 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~~~iiH~Dlkp~NiLl~~~~~~kl~Df 559 (618)
|+||.+.|+|.+++. ...++|....+++..+++||+|||+.. .|+|+|||||++||||.+|+++.|+||
T Consensus 286 Vt~fh~kGsL~dyL~-----~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF 360 (534)
T KOG3653|consen 286 VTEFHPKGSLCDYLK-----ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF 360 (534)
T ss_pred EeeeccCCcHHHHHH-----hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence 999999999999995 567999999999999999999999753 478999999999999999999999999
Q ss_pred cccccCCCCC-ccccccccccccccCccccccCCc------cccchhhhHHHHHHHHHhCCC
Q 007107 560 GLAALTPNTE-RQVSTQMVGAFGYSAPEFALSGIY------TVKSDVYSFGVVMLELLTGRK 614 (618)
Q Consensus 560 gl~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~------~~~~DvwSlG~il~elltg~~ 614 (618)
|+|..+.... .......+||.+|||||++.+... -.+.||||+|.|||||+++-.
T Consensus 361 GLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~ 422 (534)
T KOG3653|consen 361 GLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCT 422 (534)
T ss_pred ceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9997765332 222334799999999999987642 236999999999999998643
No 40
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2e-36 Score=318.34 Aligned_cols=201 Identities=25% Similarity=0.362 Sum_probs=172.7
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
++|...+.||+|+||.||++... +++.||+|++..... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 36888899999999999999765 689999999865432 2334567888999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~gg~L~~~l~----~~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~ 153 (377)
T cd05629 81 EFLPGGDLMTMLI----KYDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153 (377)
T ss_pred eCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence 9999999999986 245688999999999999999999999 999999999999999999999999999863321
Q ss_pred CCcc----------------------------------------------ccccccccccccCccccccCCccccchhhh
Q 007107 568 TERQ----------------------------------------------VSTQMVGAFGYSAPEFALSGIYTVKSDVYS 601 (618)
Q Consensus 568 ~~~~----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS 601 (618)
.... .....+||+.|+|||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 233 (377)
T cd05629 154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWS 233 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEe
Confidence 1000 001246999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCC
Q 007107 602 FGVVMLELLTGRKPLD 617 (618)
Q Consensus 602 lG~il~elltg~~Pf~ 617 (618)
|||++|||++|+.||.
T Consensus 234 lGvil~elltG~~Pf~ 249 (377)
T cd05629 234 LGAIMFECLIGWPPFC 249 (377)
T ss_pred cchhhhhhhcCCCCCC
Confidence 9999999999999995
No 41
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.3e-36 Score=311.64 Aligned_cols=198 Identities=25% Similarity=0.398 Sum_probs=175.2
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
.++|...+.||+|+||.||+|... +++.||+|.++.... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 357888999999999999999876 588999999875432 223456788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+++|+|.++++ ....+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 97 ~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 169 (329)
T PTZ00263 97 LEFVVGGELFTHLR----KAGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVP 169 (329)
T ss_pred EcCCCCChHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcC
Confidence 99999999999986 345688899999999999999999999 99999999999999999999999999997654
Q ss_pred CCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 170 ~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~ 216 (329)
T PTZ00263 170 DRT----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFF 216 (329)
T ss_pred CCc----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCC
Confidence 322 23579999999999999999999999999999999999999995
No 42
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.2e-36 Score=316.68 Aligned_cols=201 Identities=26% Similarity=0.409 Sum_probs=173.9
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
++|+..+.||+|+||.||+|+.. +|+.||+|++..... .......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36888999999999999999876 589999999975432 2234456788999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 E~~~~g~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 81 EYLPGGDMMTLLM----KKDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK 153 (364)
T ss_pred CCCCCcHHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence 9999999999986 245689999999999999999999999 999999999999999999999999999865422
Q ss_pred CCcc-------------------------------------ccccccccccccCccccccCCccccchhhhHHHHHHHHH
Q 007107 568 TERQ-------------------------------------VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELL 610 (618)
Q Consensus 568 ~~~~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ell 610 (618)
.... .....+||+.|+|||++.+..++.++|||||||++|||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~ 233 (364)
T cd05599 154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML 233 (364)
T ss_pred cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence 1100 111246999999999999999999999999999999999
Q ss_pred hCCCCCC
Q 007107 611 TGRKPLD 617 (618)
Q Consensus 611 tg~~Pf~ 617 (618)
+|+.||.
T Consensus 234 ~G~~Pf~ 240 (364)
T cd05599 234 VGYPPFC 240 (364)
T ss_pred cCCCCCC
Confidence 9999995
No 43
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.9e-36 Score=317.72 Aligned_cols=200 Identities=24% Similarity=0.324 Sum_probs=171.9
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
.|+..+.||+|+||.||+|... +++.||+|++..... .......+.+|++++++++||||+++++.+.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5788899999999999999765 588999999875432 22345678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+++|+|.+++.. .+.+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++......
T Consensus 82 ~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~ 154 (382)
T cd05625 82 YIPGGDMMSLLIR----MGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (382)
T ss_pred CCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence 9999999998862 34688899999999999999999999 9999999999999999999999999997532100
Q ss_pred C----------------------------------------------ccccccccccccccCccccccCCccccchhhhH
Q 007107 569 E----------------------------------------------RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSF 602 (618)
Q Consensus 569 ~----------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSl 602 (618)
. .......+||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (382)
T cd05625 155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 234 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEec
Confidence 0 001123479999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCC
Q 007107 603 GVVMLELLTGRKPLD 617 (618)
Q Consensus 603 G~il~elltg~~Pf~ 617 (618)
||++|||++|+.||.
T Consensus 235 Gvil~elltG~~Pf~ 249 (382)
T cd05625 235 GVILYEMLVGQPPFL 249 (382)
T ss_pred hHHHHHHHhCCCCCC
Confidence 999999999999996
No 44
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-36 Score=300.08 Aligned_cols=206 Identities=26% Similarity=0.395 Sum_probs=170.8
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHH------------HHHHHHHHHHHhhcCCCCccc
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQ------------EEDNFLEAVSNMSRLRHPNIV 471 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~------------~~~~~~~e~~~l~~l~h~niv 471 (618)
.....++|++...||+|.||.|-+|+.. +++.||||++.+.....+ ..+..++|+.+|+++.|||||
T Consensus 92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV 171 (576)
T KOG0585|consen 92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV 171 (576)
T ss_pred cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee
Confidence 3445688999999999999999999765 589999999975543221 135788999999999999999
Q ss_pred ccceEEeeC--CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeec
Q 007107 472 TLAGYCAEH--GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD 549 (618)
Q Consensus 472 ~l~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~ 549 (618)
+++++..+. +.+|+|+|||..|.+...- .....+++.++++++.+++.||+|||.+ +||||||||+|+|++
T Consensus 172 ~LiEvLDDP~s~~~YlVley~s~G~v~w~p----~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~ 244 (576)
T KOG0585|consen 172 KLIEVLDDPESDKLYLVLEYCSKGEVKWCP----PDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLS 244 (576)
T ss_pred EEEEeecCcccCceEEEEEeccCCccccCC----CCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEc
Confidence 999998775 5789999999988775432 2223399999999999999999999999 999999999999999
Q ss_pred CCCCcEEeeccccccCCCCC----ccccccccccccccCccccccCC----ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 550 DELNPHLSDCGLAALTPNTE----RQVSTQMVGAFGYSAPEFALSGI----YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 550 ~~~~~kl~Dfgl~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++|+|||+|||.+...+... ...-...+|||.|+|||...++. .+.+.||||+||+||-|+.|+.||-
T Consensus 245 ~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~ 320 (576)
T KOG0585|consen 245 SDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFF 320 (576)
T ss_pred CCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcc
Confidence 99999999999987653221 11122368999999999997733 3578999999999999999999995
No 45
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.9e-36 Score=315.57 Aligned_cols=206 Identities=23% Similarity=0.334 Sum_probs=176.7
Q ss_pred hhhhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC
Q 007107 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (618)
Q Consensus 404 ~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (618)
.+....++|+..+.||+|+||.||++... +++.+|+|.+..... .......+.+|+.+++.++||||+++++.+.+.+
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 116 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 34455688999999999999999999876 478999999864322 2233456788999999999999999999999999
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccc
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl 561 (618)
..++||||+++|+|.++++ ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+
T Consensus 117 ~~~lv~Ey~~gg~L~~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 117 YLYMVMEYMPGGDLVNLMS-----NYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred EEEEEEcCCCCCcHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 9999999999999999885 23578888999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCccccccccccccccCccccccCC----ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNTERQVSTQMVGAFGYSAPEFALSGI----YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+...............||+.|+|||++.+.. ++.++|||||||++|||++|+.||.
T Consensus 189 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~ 248 (371)
T cd05622 189 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 248 (371)
T ss_pred eeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCC
Confidence 9766443333334567999999999997543 7899999999999999999999996
No 46
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=2.9e-36 Score=311.71 Aligned_cols=199 Identities=25% Similarity=0.400 Sum_probs=174.4
Q ss_pred hhcCCcccceeccCccceEEEEEEcC--CcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN--GKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~--g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
..++|...+.||+|+||.||+|.+.+ +..||+|++..... .....+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 107 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY 107 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence 34578889999999999999997653 36899999865432 2234567889999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||+++|+|.++++ ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++..
T Consensus 108 lv~Ey~~~g~L~~~i~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~ 180 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLR----RNKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKV 180 (340)
T ss_pred EEEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCee
Confidence 9999999999999986 345689999999999999999999999 999999999999999999999999999976
Q ss_pred CCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 181 ~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~ 229 (340)
T PTZ00426 181 VDTR----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFY 229 (340)
T ss_pred cCCC----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCC
Confidence 5432 124579999999999999889999999999999999999999995
No 47
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=3.4e-36 Score=311.22 Aligned_cols=197 Identities=26% Similarity=0.395 Sum_probs=175.2
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCccccc-HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
++|+..+.||+|+||.||+|... +++.||+|+++..... ......+.+|++++..++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888999999999999999876 4889999999754322 234567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++|+|.++++ ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~----~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 81 EYVPGGDFRTLLN----NLGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT 153 (333)
T ss_pred eCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence 9999999999996 345688999999999999999999999 999999999999999999999999999976543
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 154 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~ 199 (333)
T cd05600 154 ----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFS 199 (333)
T ss_pred ----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCC
Confidence 2234579999999999999999999999999999999999999996
No 48
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=4.1e-36 Score=309.09 Aligned_cols=194 Identities=27% Similarity=0.391 Sum_probs=169.3
Q ss_pred ceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCC
Q 007107 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 493 (618)
+.||+|+||.||+|... +|+.||+|+++.... .......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999765 689999999875432 2234466788999999999999999999999999999999999999
Q ss_pred ChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCcccc
Q 007107 494 NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVS 573 (618)
Q Consensus 494 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~~ 573 (618)
+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 ~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~-~~~ 152 (323)
T cd05571 81 ELFFHLS----RERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG-ATM 152 (323)
T ss_pred cHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC-Ccc
Confidence 9999886 345789999999999999999999999 99999999999999999999999999987543221 122
Q ss_pred ccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 574 TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 574 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~ 196 (323)
T cd05571 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 196 (323)
T ss_pred cceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCC
Confidence 34579999999999999999999999999999999999999995
No 49
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=7.1e-36 Score=301.87 Aligned_cols=199 Identities=27% Similarity=0.400 Sum_probs=172.8
Q ss_pred CcccceeccCccceEEEEEEc-CCcEEEEEEcCccccc-HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
|+..+.||+|+||.||+|... +|+.||+|.+...... ......+.+|++++.+++|+||+++++++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 667789999999999999764 6899999998754332 23345678899999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++.......
T Consensus 82 ~~~g~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 82 MNGGDLKFHIYNM--GNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred cCCCcHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence 9999998877532 234689999999999999999999999 99999999999999999999999999997654322
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. .....||..|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 157 ~--~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~ 202 (285)
T cd05631 157 T--VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFR 202 (285)
T ss_pred e--ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCC
Confidence 1 234578999999999999999999999999999999999999996
No 50
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2.1e-36 Score=318.09 Aligned_cols=200 Identities=24% Similarity=0.336 Sum_probs=171.9
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
+|+..+.||+|+||.||+|+.. +++.||+|.+..... .......+.+|++++++++||||+++++.+.+.+..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 6888999999999999999865 489999999865432 22234667889999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+++|+|.+++.. .+.+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 82 ~~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~ 154 (376)
T cd05598 82 YIPGGDMMSLLIR----LGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (376)
T ss_pred CCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCcccccc
Confidence 9999999999862 45688889999999999999999999 9999999999999999999999999997432100
Q ss_pred ------------------------------------------CccccccccccccccCccccccCCccccchhhhHHHHH
Q 007107 569 ------------------------------------------ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVM 606 (618)
Q Consensus 569 ------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il 606 (618)
........+||+.|+|||++.+..++.++|||||||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 234 (376)
T cd05598 155 HDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 234 (376)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecccee
Confidence 00011235799999999999999999999999999999
Q ss_pred HHHHhCCCCCC
Q 007107 607 LELLTGRKPLD 617 (618)
Q Consensus 607 ~elltg~~Pf~ 617 (618)
|||++|+.||.
T Consensus 235 yell~G~~Pf~ 245 (376)
T cd05598 235 YEMLVGQPPFL 245 (376)
T ss_pred eehhhCCCCCC
Confidence 99999999996
No 51
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.4e-36 Score=292.59 Aligned_cols=203 Identities=29% Similarity=0.395 Sum_probs=176.4
Q ss_pred cCCcccceeccCccceEEEEEEcC-CcEEEEEEcCccccc-HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
+.|+..+.||.|.-|+||+++..+ +..+|+|++.+.... .+...+...|-++++.++||.++.+|..++.++..++||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 456777889999999999999876 589999999876543 344566778899999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
|||+||+|..+.+. .....+++..++-++..++-||+|||.+ |||.|||||+||||.++|++.|+||.++.....
T Consensus 157 eyCpGGdL~~Lrqk--Qp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQK--QPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred ecCCCccHHHHHhh--CCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence 99999999998873 3567899999999999999999999999 999999999999999999999999998732100
Q ss_pred ---------------------------------C-C---------------------ccccccccccccccCccccccCC
Q 007107 568 ---------------------------------T-E---------------------RQVSTQMVGAFGYSAPEFALSGI 592 (618)
Q Consensus 568 ---------------------------------~-~---------------------~~~~~~~~gt~~y~aPE~~~~~~ 592 (618)
. . ...+..++||-.|+|||++.+..
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 0 0 01223468999999999999999
Q ss_pred ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 593 YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 593 ~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.+.++|+|+|||++|||+.|+.||.
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFK 336 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFK 336 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcC
Confidence 9999999999999999999999996
No 52
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=6.7e-36 Score=302.42 Aligned_cols=201 Identities=24% Similarity=0.367 Sum_probs=175.1
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
++|+..+.||+|+||.||+|+.. +++.||+|+++.........+.+.+|++++++++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 36888899999999999999886 57899999997654444455678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|++++.+..+.+ ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~~l~~~~~----~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 81 YVEKNMLELLEE----MPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred cCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 999877765543 245689999999999999999999999 9999999999999999999999999999876443
Q ss_pred CccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.........|++.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~ 202 (287)
T cd07848 154 SNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFP 202 (287)
T ss_pred ccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCC
Confidence 3333334578999999999999899999999999999999999999995
No 53
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=7.6e-36 Score=309.39 Aligned_cols=207 Identities=26% Similarity=0.457 Sum_probs=171.7
Q ss_pred hhhcCCcccceeccCccceEEEEEE------cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEee
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEF------ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAE 479 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 479 (618)
...++|+..+.||+|+||.||+|.+ ..++.||+|+++... .......+.+|++++.++ +||||+++++++..
T Consensus 4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 82 (338)
T cd05102 4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA-TASEHKALMSELKILIHIGNHLNVVNLLGACTK 82 (338)
T ss_pred cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc-chHHHHHHHHHHHHHHHhccCcceeeEEeEecC
Confidence 3456788999999999999999964 235689999987543 334456789999999999 89999999998876
Q ss_pred C-CeEEEEEEecCCCChhhhhhcccCC-----------------------------------------------------
Q 007107 480 H-GQRLLVYEYVGNGNLHDMLHFADDS----------------------------------------------------- 505 (618)
Q Consensus 480 ~-~~~~lv~e~~~~gsL~~~l~~~~~~----------------------------------------------------- 505 (618)
. +..++||||+++|+|.++++..+..
T Consensus 83 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (338)
T cd05102 83 PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQE 162 (338)
T ss_pred CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchh
Confidence 4 4689999999999999998642210
Q ss_pred -----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccc-ccccccc
Q 007107 506 -----SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV-STQMVGA 579 (618)
Q Consensus 506 -----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~-~~~~~gt 579 (618)
...+++.++..++.||++||+|||+. +|+||||||+|||+++++.+||+|||+++......... .....++
T Consensus 163 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~ 239 (338)
T cd05102 163 TDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLP 239 (338)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCC
Confidence 13478889999999999999999999 99999999999999999999999999997654322221 1223567
Q ss_pred ccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 580 FGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 580 ~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
+.|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 240 ~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~ 278 (338)
T cd05102 240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYP 278 (338)
T ss_pred ccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCC
Confidence 88999999999999999999999999999997 999986
No 54
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=5e-36 Score=313.84 Aligned_cols=203 Identities=23% Similarity=0.333 Sum_probs=174.1
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
...++|+..+.||+|+||.||+|+.. +++.||+|.+..... .......+.+|+.+++.++||||+++++++.+.+..+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 34568899999999999999999876 588999999864322 2233456788999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||+++|+|.++++ ...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++..
T Consensus 120 lv~Ey~~gg~L~~~l~-----~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~ 191 (370)
T cd05596 120 MVMEYMPGGDLVNLMS-----NYDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMK 191 (370)
T ss_pred EEEcCCCCCcHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceee
Confidence 9999999999999886 23578888999999999999999999 999999999999999999999999999976
Q ss_pred CCCCCccccccccccccccCccccccC----CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFALSG----IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.............||+.|+|||++.+. .++.++|||||||++|||++|+.||.
T Consensus 192 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~ 248 (370)
T cd05596 192 MDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 248 (370)
T ss_pred ccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcC
Confidence 543332223346799999999998653 37899999999999999999999996
No 55
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-37 Score=302.88 Aligned_cols=201 Identities=30% Similarity=0.469 Sum_probs=177.9
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
...|...+.||+|.||.||+|... .++.||+|++...... .+..++.+|+..+.+++++||.++|+.+.....++++|
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~-deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAE-DEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcc-hhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 345777789999999999999654 5899999999866533 35567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
|||.+|++.+.++ ....+++..+..+..++..|+.|||++ +.+|||||+.|||+..+|.+|++|||.+.....
T Consensus 91 ey~~gGsv~~lL~----~~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~ 163 (467)
T KOG0201|consen 91 EYCGGGSVLDLLK----SGNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTN 163 (467)
T ss_pred HHhcCcchhhhhc----cCCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeec
Confidence 9999999999996 344457888888999999999999999 999999999999999999999999999977755
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
..... ..++||+.|||||++....|+.|+||||||++++||.+|.+|+.+
T Consensus 164 ~~~rr-~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~ 213 (467)
T KOG0201|consen 164 TVKRR-KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSK 213 (467)
T ss_pred hhhcc-ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcc
Confidence 43333 668999999999999998999999999999999999999999864
No 56
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-36 Score=312.47 Aligned_cols=201 Identities=29% Similarity=0.489 Sum_probs=172.5
Q ss_pred cCCcccceeccCccceEEEEEEcC--C--cE-EEEEEcCc-ccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFAN--G--KI-MAVKKIDN-AALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~--g--~~-vavK~~~~-~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
.+....+.||+|+||.||+|.+.. + .. ||+|..+. .........+|+.|+++|++++|||||+++|++.....+
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl 236 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL 236 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc
Confidence 444555799999999999997653 2 23 89999986 335667788999999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++|||+|.+|+|.++++. ....++..++..++.++|+||+|||++ ++|||||.++|+|++.++.+||+|||+++
T Consensus 237 ~ivmEl~~gGsL~~~L~k---~~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~ 310 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKK---NKKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSR 310 (474)
T ss_pred EEEEEecCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCcccccc
Confidence 999999999999999973 334699999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 564 LTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
........ .....-+.+|+|||.+....|++++|||||||++||+++ |..||.
T Consensus 311 ~~~~~~~~-~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~ 364 (474)
T KOG0194|consen 311 AGSQYVMK-KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYP 364 (474)
T ss_pred CCcceeec-cccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCC
Confidence 65411111 111235679999999999999999999999999999999 888985
No 57
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1e-35 Score=304.71 Aligned_cols=192 Identities=30% Similarity=0.422 Sum_probs=168.4
Q ss_pred eccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCCCh
Q 007107 418 IGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNL 495 (618)
Q Consensus 418 Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 495 (618)
||+|+||.||+|... +++.||+|+++.... .......+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999876 478999999865432 333456788899999999999999999999999999999999999999
Q ss_pred hhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCcccccc
Q 007107 496 HDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQ 575 (618)
Q Consensus 496 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~~~~ 575 (618)
.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... .....
T Consensus 81 ~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 152 (312)
T cd05585 81 FHHLQ----REGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTNT 152 (312)
T ss_pred HHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCC-Ccccc
Confidence 99986 245689999999999999999999999 99999999999999999999999999987543222 22334
Q ss_pred ccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 576 MVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 576 ~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 153 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~ 194 (312)
T cd05585 153 FCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFY 194 (312)
T ss_pred ccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcC
Confidence 679999999999999999999999999999999999999995
No 58
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-36 Score=291.47 Aligned_cols=202 Identities=29% Similarity=0.441 Sum_probs=176.2
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee-----CC
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE-----HG 481 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~ 481 (618)
....|...+.||+|+||.|..|... +|+.||||++..........++-.+|+++++.++|+||+.+++++.. -.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 3455666789999999999999765 58999999998777677778889999999999999999999998865 34
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccc
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl 561 (618)
..|+|+|+|+ .+|.+.++ .++.++...+..+++|+++||.|+|+. +|+||||||+|++++.+..+||+|||+
T Consensus 100 DvYiV~elMe-tDL~~iik----~~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGL 171 (359)
T KOG0660|consen 100 DVYLVFELME-TDLHQIIK----SQQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGL 171 (359)
T ss_pred eeEEehhHHh-hHHHHHHH----cCccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccc
Confidence 6899999995 59999996 445599999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCC-CccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNT-ERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|+..... .....+.++.|..|+|||++.. ..|+.+.||||.|||+.||++|++-|-
T Consensus 172 AR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFp 229 (359)
T KOG0660|consen 172 ARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFP 229 (359)
T ss_pred eeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCC
Confidence 9987542 2334467889999999998865 679999999999999999999998774
No 59
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.5e-35 Score=304.83 Aligned_cols=194 Identities=27% Similarity=0.386 Sum_probs=168.6
Q ss_pred ceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCC
Q 007107 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 493 (618)
+.||+|+||.||++... +|+.||+|.++.... .......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 36999999999999765 589999999875432 2234556788999999999999999999999999999999999999
Q ss_pred ChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCcccc
Q 007107 494 NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVS 573 (618)
Q Consensus 494 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~~ 573 (618)
+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||++....... ...
T Consensus 81 ~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~ 152 (323)
T cd05595 81 ELFFHLS----RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-ATM 152 (323)
T ss_pred cHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCC-Ccc
Confidence 9998885 245689999999999999999999999 99999999999999999999999999987532221 122
Q ss_pred ccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 574 TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 574 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~ 196 (323)
T cd05595 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 196 (323)
T ss_pred ccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCC
Confidence 34579999999999999999999999999999999999999995
No 60
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.2e-35 Score=306.70 Aligned_cols=202 Identities=26% Similarity=0.345 Sum_probs=173.4
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCccc-ccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAA-LSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
++|+..+.||+|+||.||++... +++.||+|.+.... ......+.+.+|..++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 46888899999999999999876 48999999986432 22334566888999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++|+|.+++.. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 81 DYYVGGDLLTLLSK---FEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA 154 (331)
T ss_pred ecCCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence 99999999999863 235688999999999999999999999 999999999999999999999999999876543
Q ss_pred CCccccccccccccccCcccccc-----CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALS-----GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..........||+.|+|||++.. ..++.++|||||||++|||++|+.||.
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~ 209 (331)
T cd05597 155 DGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFY 209 (331)
T ss_pred CCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCC
Confidence 33322333579999999999863 457889999999999999999999995
No 61
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-36 Score=330.92 Aligned_cols=205 Identities=32% Similarity=0.551 Sum_probs=177.1
Q ss_pred hcCCcccceeccCccceEEEEEEcC--Cc----EEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCe
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFAN--GK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~--g~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (618)
....+..+.||+|+||.||+|...+ |. .||+|.++... +.++..+|++|..+|++++|||||+++|++.+.+.
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~-~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~ 769 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS-SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP 769 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence 4456677789999999999997764 43 48999987543 66788999999999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhcccCC---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeec
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDS---SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Df 559 (618)
.++++|||++|+|..|++..+.. ...++..+.+.++.|||+|+.||+++ ++|||||..+|+|+++...|||+||
T Consensus 770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEccc
Confidence 99999999999999999865432 45688899999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCccccccc-cccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 560 GLAALTPNTERQVSTQM-VGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 560 gl~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
|+|+.+-..+.+..... .-..+|||||.+..+.++.|+|||||||++||++| |..||-
T Consensus 847 GlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~ 906 (1025)
T KOG1095|consen 847 GLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYP 906 (1025)
T ss_pred chhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCC
Confidence 99995443333333222 34469999999999999999999999999999999 999984
No 62
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=5.6e-36 Score=311.99 Aligned_cols=201 Identities=25% Similarity=0.376 Sum_probs=176.8
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccH-HHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL-QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
++|...+.||+|+||.||+|... +|+.||+|+++...... .....+.+|++++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36888899999999999999876 68999999997543322 34567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 81 EYMPGGDLMNLLIR----KDVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred cCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 99999999999863 35789999999999999999999998 999999999999999999999999999976543
Q ss_pred CC----------------------------ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TE----------------------------RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. ........||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~ 231 (350)
T cd05573 154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFY 231 (350)
T ss_pred cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCC
Confidence 32 112234579999999999999999999999999999999999999995
No 63
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=9.2e-36 Score=307.49 Aligned_cols=202 Identities=26% Similarity=0.332 Sum_probs=173.9
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
++|...+.||+|+||.||+++.. +++.||+|.+..... .......+.+|..++..++|+||+++++++.+.+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999876 478899999865322 2334456788999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++|+|.++++. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 Ey~~gg~L~~~l~~---~~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 81 DYYVGGDLLTLLSK---FEDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ 154 (331)
T ss_pred eCCCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence 99999999999963 235688999999999999999999999 999999999999999999999999999976644
Q ss_pred CCccccccccccccccCcccccc-----CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALS-----GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~ 209 (331)
T cd05624 155 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY 209 (331)
T ss_pred CCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCcc
Confidence 33323334579999999999875 467889999999999999999999995
No 64
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2e-35 Score=304.52 Aligned_cols=194 Identities=26% Similarity=0.390 Sum_probs=169.1
Q ss_pred ceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCC
Q 007107 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 493 (618)
+.||+|+||.||++... +|+.||+|++..... .......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999765 589999999875432 2334567888999999999999999999999999999999999999
Q ss_pred ChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCcccc
Q 007107 494 NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVS 573 (618)
Q Consensus 494 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~~ 573 (618)
+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++...... ...
T Consensus 81 ~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~ 152 (328)
T cd05593 81 ELFFHLS----RERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA-ATM 152 (328)
T ss_pred CHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcc-ccc
Confidence 9998885 345689999999999999999999999 99999999999999999999999999987543221 122
Q ss_pred ccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 574 TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 574 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~ 196 (328)
T cd05593 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 196 (328)
T ss_pred ccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCC
Confidence 34579999999999999999999999999999999999999995
No 65
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=7.1e-36 Score=312.16 Aligned_cols=201 Identities=25% Similarity=0.385 Sum_probs=173.7
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
++|+..+.||+|+||.||++... +++.||+|++..... .......+..|++++..++||||+++++.+.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36788899999999999999876 588999999875332 2334567888999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 E~~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 81 EFLPGGDMMTLLM----KKDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred eCCCCccHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence 9999999999986 345689999999999999999999999 999999999999999999999999999864421
Q ss_pred CCc----------------------------------cccccccccccccCccccccCCccccchhhhHHHHHHHHHhCC
Q 007107 568 TER----------------------------------QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGR 613 (618)
Q Consensus 568 ~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~ 613 (618)
... ......+||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~ 233 (360)
T cd05627 154 AHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (360)
T ss_pred ccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCC
Confidence 100 0112357999999999999999999999999999999999999
Q ss_pred CCCC
Q 007107 614 KPLD 617 (618)
Q Consensus 614 ~Pf~ 617 (618)
.||.
T Consensus 234 ~Pf~ 237 (360)
T cd05627 234 PPFC 237 (360)
T ss_pred CCCC
Confidence 9996
No 66
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-35 Score=290.86 Aligned_cols=196 Identities=29% Similarity=0.445 Sum_probs=163.4
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhc--CCCCcccccceEEeeCC-
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR--LRHPNIVTLAGYCAEHG- 481 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~- 481 (618)
-.+..++....+.||+|.||.||+|+|. |+.||||++... +++.+.+|.++.+. ++|+||+.+++.-..+.
T Consensus 206 QRTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr-----dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~g 279 (513)
T KOG2052|consen 206 QRTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR-----DERSWFRETEIYQTVMLRHENILGFIAADNKDNG 279 (513)
T ss_pred HHhhhheeEEEEEecCccccceeecccc-CCceEEEEeccc-----chhhhhhHHHHHHHHHhccchhhhhhhccccCCC
Confidence 3456677888999999999999999996 899999999632 35566667666654 59999999998875543
Q ss_pred ---eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhh-----cCCCCceecCCCCCCeeecCCCC
Q 007107 482 ---QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE-----VCLPSVVHRNFKSANILLDDELN 553 (618)
Q Consensus 482 ---~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-----~~~~~iiH~Dlkp~NiLl~~~~~ 553 (618)
+++||++|.+.|||+|++. ...++....++++..+|.||+|||. +..|.|.|||||+.||||..++.
T Consensus 280 s~TQLwLvTdYHe~GSL~DyL~-----r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~ 354 (513)
T KOG2052|consen 280 SWTQLWLVTDYHEHGSLYDYLN-----RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 354 (513)
T ss_pred ceEEEEEeeecccCCcHHHHHh-----hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCc
Confidence 6899999999999999996 4678999999999999999999994 46689999999999999999999
Q ss_pred cEEeeccccccCCCCCc---cccccccccccccCccccccCC------ccccchhhhHHHHHHHHHh
Q 007107 554 PHLSDCGLAALTPNTER---QVSTQMVGAFGYSAPEFALSGI------YTVKSDVYSFGVVMLELLT 611 (618)
Q Consensus 554 ~kl~Dfgl~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwSlG~il~ellt 611 (618)
+.|+|+|+|.......+ ......+||.+|||||++.... .-..+||||||.|+||+.-
T Consensus 355 C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiar 421 (513)
T KOG2052|consen 355 CCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIAR 421 (513)
T ss_pred EEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHH
Confidence 99999999977654432 2234569999999999996543 1235999999999999875
No 67
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.5e-35 Score=306.30 Aligned_cols=200 Identities=28% Similarity=0.398 Sum_probs=171.5
Q ss_pred CCcccceeccCccceEEEEEEc----CCcEEEEEEcCcccc--cHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAAL--SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 483 (618)
+|+..+.||+|+||.||+++.. +++.||+|++..... .....+.+..|++++.++ +||||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4778889999999999999753 578999999865432 122345678899999999 599999999999999999
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++||||+++|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 81 ~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~ 153 (332)
T cd05614 81 HLILDYVSGGEMFTHLY----QRDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSK 153 (332)
T ss_pred EEEEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCc
Confidence 99999999999999886 345689999999999999999999999 99999999999999999999999999997
Q ss_pred cCCCCCccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..............||+.|+|||++.+. .++.++|||||||++|||+||+.||+
T Consensus 154 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~ 208 (332)
T cd05614 154 EFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFT 208 (332)
T ss_pred cccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCC
Confidence 6544333333456799999999999865 47889999999999999999999995
No 68
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.7e-35 Score=305.73 Aligned_cols=202 Identities=26% Similarity=0.343 Sum_probs=172.6
Q ss_pred cCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
++|...+.||+|+||.||++.... ++.+|+|.+.+... .......+.+|+.++..++|+||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 368888999999999999998764 77899999864322 2233455788999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++|+|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 ey~~~g~L~~~l~~---~~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~ 154 (332)
T cd05623 81 DYYVGGDLLTLLSK---FEDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLME 154 (332)
T ss_pred eccCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence 99999999999963 235689999999999999999999999 999999999999999999999999999875533
Q ss_pred CCccccccccccccccCccccc-----cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..........||+.|+|||++. ...++.++|||||||++|||++|+.||.
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~ 209 (332)
T cd05623 155 DGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFY 209 (332)
T ss_pred CCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCC
Confidence 3322233457999999999986 3458899999999999999999999996
No 69
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=6.9e-36 Score=308.59 Aligned_cols=202 Identities=28% Similarity=0.381 Sum_probs=175.7
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
++|...+.||+|+||.||++... +|+.||+|+++.... .....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36888899999999999999765 589999999976543 2334567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++|+|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 81 EYQPGGDLLSLLNRY---EDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred CCCCCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence 999999999999632 35689999999999999999999999 999999999999999999999999999977654
Q ss_pred CCccccccccccccccCccccc------cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFAL------SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..........||+.|+|||++. ...++.++|||||||++|||++|+.||.
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~ 210 (330)
T cd05601 155 NKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFH 210 (330)
T ss_pred CCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCC
Confidence 4333333457999999999987 4567899999999999999999999996
No 70
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.2e-36 Score=304.59 Aligned_cols=203 Identities=27% Similarity=0.432 Sum_probs=185.2
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCe-EEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ-RLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~lv~ 487 (618)
++|...+.+|+|+||.++..+++ +++.+++|++........+.+....|+.++++++|||||.+.+.|.+++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 46888899999999999999766 57899999998877777777788999999999999999999999999998 89999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
+|++||++.+.+...+ +..+++..+..++.|++.|+.|||++ +|.|||||+.||+++.++.|||.|||+|+....
T Consensus 84 ~Y~eGg~l~~~i~~~k--~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK--GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred eecCCCCHHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 9999999999997543 56799999999999999999999988 999999999999999999999999999998865
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
.. ....+++||+.||.||.+.+.+|+.|+|||||||++|||++=+++|+.
T Consensus 159 ~~-~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a 208 (426)
T KOG0589|consen 159 ED-SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKA 208 (426)
T ss_pred ch-hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCc
Confidence 54 344568999999999999999999999999999999999999999973
No 71
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.1e-35 Score=302.54 Aligned_cols=194 Identities=27% Similarity=0.427 Sum_probs=167.6
Q ss_pred ceeccCccceEEEEEEc----CCcEEEEEEcCcccc--cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 416 FLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAAL--SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+.||+|+||.||+++.. .++.||+|.++.... .......+..|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 57999999999999753 578999999875432 122345678899999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++++|.++++ ..+.+.+..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 82 LSGGELFMHLE----REGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred CCCchHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence 99999999886 345678888999999999999999999 99999999999999999999999999986543222
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 155 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~ 201 (323)
T cd05584 155 -TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFT 201 (323)
T ss_pred -CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCC
Confidence 22234579999999999999889999999999999999999999996
No 72
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=4.6e-35 Score=301.53 Aligned_cols=199 Identities=24% Similarity=0.376 Sum_probs=169.9
Q ss_pred CCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCC-cccccceEEeeCCeEEEEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHP-NIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lv~ 487 (618)
+|+..+.||+|+||.||+|...+ ++.||+|++..... .....+.+..|.+++..++|+ +|+++++++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 47788899999999999998764 78899999875432 223456678888888888765 5888999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||++.....
T Consensus 81 E~~~~g~L~~~~~----~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05587 81 EYVNGGDLMYHIQ----QVGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF 153 (324)
T ss_pred cCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence 9999999999886 345688999999999999999999999 999999999999999999999999999864322
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... ......||+.|+|||++.+..++.++||||+||++|||+||+.||+
T Consensus 154 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~ 202 (324)
T cd05587 154 GGK-TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFD 202 (324)
T ss_pred CCC-ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCC
Confidence 211 2234579999999999999999999999999999999999999996
No 73
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=4.2e-35 Score=300.53 Aligned_cols=194 Identities=25% Similarity=0.405 Sum_probs=164.0
Q ss_pred ceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhc-CCCCcccccceEEeeCCeEEEEEEecCC
Q 007107 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSR-LRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~ 492 (618)
+.||+|+||.||+|... +++.||+|.++.... .....+.+..|..++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999876 478899999875432 12233444555565554 4899999999999999999999999999
Q ss_pred CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccc
Q 007107 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (618)
Q Consensus 493 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~ 572 (618)
|+|.++++ ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~~~----~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~ 152 (316)
T cd05592 81 GDLMFHIQ----SSGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GK 152 (316)
T ss_pred CcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Cc
Confidence 99999886 245689999999999999999999999 99999999999999999999999999997543222 22
Q ss_pred cccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~ 197 (316)
T cd05592 153 ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFH 197 (316)
T ss_pred cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCC
Confidence 234579999999999999999999999999999999999999996
No 74
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.7e-35 Score=303.36 Aligned_cols=194 Identities=26% Similarity=0.391 Sum_probs=167.9
Q ss_pred ceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCC
Q 007107 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 493 (618)
+.||+|+||.||++... +|+.||+|.++.... .......+..|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999764 689999999975432 2234456788999999999999999999999999999999999999
Q ss_pred ChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccc
Q 007107 494 NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE-VCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (618)
Q Consensus 494 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~ 572 (618)
+|.+++. ....+++..+..++.|++.||+|||+ . +|+||||||+|||+++++.+||+|||+++....... .
T Consensus 81 ~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~-~ 152 (325)
T cd05594 81 ELFFHLS----RERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-T 152 (325)
T ss_pred cHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc-c
Confidence 9998885 34568999999999999999999997 6 999999999999999999999999999875432221 2
Q ss_pred cccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||.
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~ 197 (325)
T cd05594 153 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 197 (325)
T ss_pred cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCC
Confidence 234579999999999999999999999999999999999999995
No 75
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=6.2e-35 Score=300.56 Aligned_cols=197 Identities=27% Similarity=0.425 Sum_probs=167.5
Q ss_pred CcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHH---hhcCCCCcccccceEEeeCCeEEEE
Q 007107 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSN---MSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~---l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
|...+.||+|+||.||+|... +|+.||+|+++.... .....+.+.+|+++ ++.++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 566789999999999999765 589999999975432 22233456666554 4567899999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+++++|..+++ ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++....
T Consensus 81 ~E~~~~~~L~~~~~-----~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05589 81 MEYAAGGDLMMHIH-----TDVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152 (324)
T ss_pred EcCCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence 99999999988875 35689999999999999999999999 99999999999999999999999999986543
Q ss_pred CCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... .......|++.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 153 ~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~ 202 (324)
T cd05589 153 GFG-DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFP 202 (324)
T ss_pred CCC-CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCC
Confidence 222 22234679999999999999999999999999999999999999996
No 76
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=5.3e-35 Score=301.58 Aligned_cols=194 Identities=26% Similarity=0.414 Sum_probs=168.0
Q ss_pred ceeccCccceEEEEEEc-CCcEEEEEEcCccccc-HHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEEEEEecCC
Q 007107 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 492 (618)
+.||+|+||.||+|... +++.||+|.++..... ....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36999999999999875 5889999999764332 22345678889988888 799999999999999999999999999
Q ss_pred CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccc
Q 007107 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (618)
Q Consensus 493 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~ 572 (618)
|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||++....... ..
T Consensus 81 g~L~~~~~----~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~-~~ 152 (329)
T cd05588 81 GDLMFHMQ----RQRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG-DT 152 (329)
T ss_pred CCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCC-Cc
Confidence 99998885 245789999999999999999999999 99999999999999999999999999986432221 12
Q ss_pred cccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~ 197 (329)
T cd05588 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcc
Confidence 234579999999999999999999999999999999999999995
No 77
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=5.6e-35 Score=300.73 Aligned_cols=199 Identities=23% Similarity=0.371 Sum_probs=168.9
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEEEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 487 (618)
+|...+.||+|+||.||+|... +++.||+|.+..... .......+..|..++... .|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4777889999999999999876 478999999875432 222334556677777666 5899999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~ 153 (323)
T cd05616 81 EYVNGGDLMYQIQ----QVGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW 153 (323)
T ss_pred cCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence 9999999998886 235688999999999999999999999 999999999999999999999999999875432
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. .......||+.|+|||++.+..++.++|||||||++|||+||+.||+
T Consensus 154 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~ 202 (323)
T cd05616 154 DG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 202 (323)
T ss_pred CC-CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCC
Confidence 21 12234579999999999999999999999999999999999999996
No 78
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=7.4e-35 Score=293.63 Aligned_cols=196 Identities=24% Similarity=0.387 Sum_probs=169.3
Q ss_pred eccCccceEEEEEEc-CCcEEEEEEcCccccc-HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCCCh
Q 007107 418 IGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNL 495 (618)
Q Consensus 418 Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 495 (618)
||+|+||+||++... +|+.||+|.+...... ....+.+..|+++++.++|+||+++.+++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999765 5889999998754322 22335678899999999999999999999999999999999999999
Q ss_pred hhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCcccccc
Q 007107 496 HDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQ 575 (618)
Q Consensus 496 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~~~~ 575 (618)
.+++.........+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+|||++........ ....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~ 156 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTKG 156 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-cccc
Confidence 988754433456789999999999999999999999 999999999999999999999999999976543322 2234
Q ss_pred ccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 576 MVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 576 ~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~ 198 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFR 198 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 578999999999999999999999999999999999999995
No 79
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=6.7e-35 Score=300.69 Aligned_cols=194 Identities=26% Similarity=0.419 Sum_probs=167.0
Q ss_pred ceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEEEEEecCC
Q 007107 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 492 (618)
+.||+|+||.||+|... +++.||+|.++.... .......+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 36999999999999876 478999999975432 223445677888887766 899999999999999999999999999
Q ss_pred CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccc
Q 007107 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (618)
Q Consensus 493 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~ 572 (618)
|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... .
T Consensus 81 ~~L~~~~~----~~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~-~ 152 (329)
T cd05618 81 GDLMFHMQ----RQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD-T 152 (329)
T ss_pred CCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC-c
Confidence 99998875 345689999999999999999999999 999999999999999999999999999875322221 2
Q ss_pred cccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~ 197 (329)
T cd05618 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCc
Confidence 234579999999999999999999999999999999999999994
No 80
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=6.1e-35 Score=299.88 Aligned_cols=194 Identities=25% Similarity=0.409 Sum_probs=166.2
Q ss_pred ceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEEEEEecCC
Q 007107 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 492 (618)
+.||+|+||.||+|+.. +++.||+|+++.... .......+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999876 488999999875432 223345667778877765 699999999999999999999999999
Q ss_pred CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccc
Q 007107 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (618)
Q Consensus 493 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~ 572 (618)
|+|.++++ ....+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++....... ..
T Consensus 81 g~L~~~i~----~~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-~~ 152 (320)
T cd05590 81 GDLMFHIQ----KSRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-KT 152 (320)
T ss_pred chHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-Cc
Confidence 99999886 345689999999999999999999999 99999999999999999999999999987542221 22
Q ss_pred cccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~ 197 (320)
T cd05590 153 TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFE 197 (320)
T ss_pred ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCC
Confidence 234579999999999999999999999999999999999999996
No 81
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=5.5e-35 Score=300.50 Aligned_cols=194 Identities=26% Similarity=0.401 Sum_probs=166.6
Q ss_pred ceeccCccceEEEEEEcC-CcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEEEEEecCC
Q 007107 416 FLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 492 (618)
+.||+|+||.||+|+..+ ++.||+|+++.... .......+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 369999999999998764 78999999875432 223345667788888765 799999999999999999999999999
Q ss_pred CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccc
Q 007107 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (618)
Q Consensus 493 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~ 572 (618)
|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++....... ..
T Consensus 81 ~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~ 152 (321)
T cd05591 81 GDLMFQIQ----RSRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-VT 152 (321)
T ss_pred CcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCC-cc
Confidence 99998886 345688999999999999999999999 99999999999999999999999999987543222 12
Q ss_pred cccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~ 197 (321)
T cd05591 153 TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFE 197 (321)
T ss_pred ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCC
Confidence 234579999999999999999999999999999999999999996
No 82
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=7.4e-35 Score=302.00 Aligned_cols=199 Identities=29% Similarity=0.450 Sum_probs=168.7
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC-----CeEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH-----GQRL 484 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~ 484 (618)
+|+..+.||+|+||.||+|... +|+.||+|++............+.+|++++++++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4778889999999999999865 589999999875443444556788999999999999999999988543 2579
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||++ ++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 81 lv~e~~~-~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 81 VVFELME-SDLHQVIK----ANDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARV 152 (338)
T ss_pred EEEecCC-CCHHHHHH----hcccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccc
Confidence 9999995 68988885 345689999999999999999999999 999999999999999999999999999975
Q ss_pred CCCCCc--cccccccccccccCcccccc--CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 565 TPNTER--QVSTQMVGAFGYSAPEFALS--GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 565 ~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
...... .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||.
T Consensus 153 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~ 209 (338)
T cd07859 153 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFP 209 (338)
T ss_pred cccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCC
Confidence 432211 12234579999999999876 678999999999999999999999995
No 83
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=8.4e-35 Score=314.47 Aligned_cols=211 Identities=25% Similarity=0.358 Sum_probs=181.0
Q ss_pred hhhhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC-
Q 007107 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG- 481 (618)
Q Consensus 404 ~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~- 481 (618)
......++|...+.||+|+||.||+|+.. +|+.||+|++............+.+|+..+..++|+||+++++.+...+
T Consensus 26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~ 105 (496)
T PTZ00283 26 TAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP 105 (496)
T ss_pred cccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc
Confidence 33445678999999999999999999754 6899999999766656666778889999999999999999887765432
Q ss_pred -------eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCc
Q 007107 482 -------QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNP 554 (618)
Q Consensus 482 -------~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~ 554 (618)
..++||||+++|+|.++++........+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+
T Consensus 106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~v 182 (496)
T PTZ00283 106 RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLV 182 (496)
T ss_pred cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCE
Confidence 36899999999999999975444556789999999999999999999999 99999999999999999999
Q ss_pred EEeeccccccCCCCC-ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 555 HLSDCGLAALTPNTE-RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 555 kl~Dfgl~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
||+|||+++...... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 183 kL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~ 246 (496)
T PTZ00283 183 KLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFD 246 (496)
T ss_pred EEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 999999997654321 222334679999999999999999999999999999999999999996
No 84
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.6e-35 Score=302.57 Aligned_cols=194 Identities=29% Similarity=0.442 Sum_probs=170.2
Q ss_pred ceeccCccceEEEEEE----cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecC
Q 007107 416 FLIGEGSLGRVYRAEF----ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVG 491 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 491 (618)
+.||+|+||.||+++. .+|+.||+|+++...........+..|++++++++||||+++++++...+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 4799999999999865 357899999997655444455667889999999999999999999999999999999999
Q ss_pred CCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCcc
Q 007107 492 NGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571 (618)
Q Consensus 492 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~ 571 (618)
+|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++........
T Consensus 82 ~~~L~~~l~----~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~- 153 (318)
T cd05582 82 GGDLFTRLS----KEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK- 153 (318)
T ss_pred CCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC-
Confidence 999999885 345689999999999999999999999 999999999999999999999999999876543221
Q ss_pred ccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 572 VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
......||+.|+|||++.+..++.++|||||||++|||++|+.||+
T Consensus 154 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~ 199 (318)
T cd05582 154 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQ 199 (318)
T ss_pred ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCC
Confidence 2234579999999999999889999999999999999999999996
No 85
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-35 Score=292.71 Aligned_cols=203 Identities=28% Similarity=0.420 Sum_probs=180.1
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCccccc-HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
..+.|..-++||+|+||.||-+..+ .|+.||+|++.+...+ .+.+...+.|-.++++++.+.||.+.-.|++.+.+++
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL 262 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence 3456788889999999999999765 5999999999766543 3345566889999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
|+..|.||+|.-++... ....+++..++-++.+|+.||++||+. +||.|||||+|||+|+.|+++|+|.|+|..+
T Consensus 263 VLtlMNGGDLkfHiyn~--g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei 337 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNH--GNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEI 337 (591)
T ss_pred EEEeecCCceeEEeecc--CCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEec
Confidence 99999999998777533 346799999999999999999999999 9999999999999999999999999999988
Q ss_pred CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+..... .+.+||.+|||||++....|+...|+|||||++|||+.|+.||.
T Consensus 338 ~~g~~~--~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr 387 (591)
T KOG0986|consen 338 PEGKPI--RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFR 387 (591)
T ss_pred CCCCcc--ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchh
Confidence 765444 34589999999999999999999999999999999999999996
No 86
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=9.3e-35 Score=299.11 Aligned_cols=194 Identities=28% Similarity=0.433 Sum_probs=164.5
Q ss_pred ceeccCccceEEEEEEc-CCcEEEEEEcCccccc-HHHHHHHHHHHH-HhhcCCCCcccccceEEeeCCeEEEEEEecCC
Q 007107 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVS-NMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 492 (618)
+.||+|+||.||+|... +|+.||+|++...... ......+..|.. +++.++||||+++++.+...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 36999999999999875 5899999998754321 223344445544 56788999999999999999999999999999
Q ss_pred CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccc
Q 007107 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (618)
Q Consensus 493 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~ 572 (618)
|+|.++++ ....+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||++....... ..
T Consensus 81 g~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (323)
T cd05575 81 GELFFHLQ----RERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS-KT 152 (323)
T ss_pred CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC-Cc
Confidence 99999886 345688999999999999999999999 99999999999999999999999999986543222 22
Q ss_pred cccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~ 197 (323)
T cd05575 153 TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFY 197 (323)
T ss_pred cccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCC
Confidence 234579999999999999999999999999999999999999995
No 87
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.1e-34 Score=295.84 Aligned_cols=200 Identities=26% Similarity=0.392 Sum_probs=169.8
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.++|+..+.||+|+||.||+|... +++.||+|++...... .....+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE-GTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVF 82 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc-ccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEE
Confidence 467889999999999999999876 6889999998754322 22345678999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||++ ++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++.....
T Consensus 83 e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 155 (303)
T cd07869 83 EYVH-TDLCQYMDK---HPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSV 155 (303)
T ss_pred ECCC-cCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccC
Confidence 9996 578777752 345688999999999999999999999 999999999999999999999999999875432
Q ss_pred CCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.
T Consensus 156 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 205 (303)
T cd07869 156 PS-HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFP 205 (303)
T ss_pred CC-ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 22 22233568999999999875 457889999999999999999999995
No 88
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.3e-34 Score=312.75 Aligned_cols=202 Identities=22% Similarity=0.268 Sum_probs=174.5
Q ss_pred CCcccceeccCccceEEEEEEc-C-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-N-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
.|...+.||+|++|.||+|... + ++.||+|.+.... ......+++|+.+++.++||||+++++++...+..++|||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~--~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E 145 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND--ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME 145 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence 3788889999999999999654 3 5778888765432 3345667889999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+++|+|.++++........+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence 9999999998864433456789999999999999999999999 9999999999999999999999999999866432
Q ss_pred Cc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 223 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~ 272 (478)
T PTZ00267 223 VSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFK 272 (478)
T ss_pred cccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCC
Confidence 21 22334579999999999999999999999999999999999999986
No 89
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.1e-34 Score=297.44 Aligned_cols=199 Identities=26% Similarity=0.429 Sum_probs=175.1
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.++|+..+.||+|+||.||++... +|..+|+|.+.... .......+.+|++++++++||||+++++++...+..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEe
Confidence 467889999999999999999876 57889999886542 3345577999999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++++|.++++. ...+++..+..++.|++.||+|||+.+ +|+||||||+|||+++++.+||+|||++.....
T Consensus 83 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 83 EHMDGGSLDQVLKE----AKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (331)
T ss_pred ecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccc
Confidence 99999999999863 346889999999999999999999863 699999999999999999999999999875533
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 157 ~---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~ 203 (331)
T cd06649 157 S---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIP 203 (331)
T ss_pred c---ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 2 2234578999999999999999999999999999999999999995
No 90
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=9.2e-35 Score=294.19 Aligned_cols=199 Identities=24% Similarity=0.389 Sum_probs=169.4
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
++|...+.||+|+||.||+|... +++.||+|+++.... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc-CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence 46888899999999999999775 588999999865432 2234567789999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+++ +|.+++.. ....+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 84 ~~~~-~l~~~l~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~ 156 (288)
T cd07871 84 YLDS-DLKQYLDN---CGNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVP 156 (288)
T ss_pred CCCc-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCC
Confidence 9975 89888853 234578899999999999999999999 9999999999999999999999999998765432
Q ss_pred CccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. ......+++.|+|||++.+ ..++.++||||+||++|||+||+.||.
T Consensus 157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~ 205 (288)
T cd07871 157 TK-TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFP 205 (288)
T ss_pred Cc-cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 22 1233568999999999876 568999999999999999999999995
No 91
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.4e-34 Score=304.38 Aligned_cols=193 Identities=21% Similarity=0.311 Sum_probs=167.9
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
...+|...+.||+|+||.||++... .++.||+|... ...+.+|++++++++||||+++++++......++|
T Consensus 90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~--------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv 161 (391)
T PHA03212 90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ--------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLI 161 (391)
T ss_pred ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh--------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEE
Confidence 3457999999999999999999765 58899999653 23467899999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
+|++. ++|.+++. ....+++.+++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 162 ~e~~~-~~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~ 233 (391)
T PHA03212 162 LPRYK-TDLYCYLA----AKRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPV 233 (391)
T ss_pred EecCC-CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcccccc
Confidence 99995 68888775 235688999999999999999999999 99999999999999999999999999997543
Q ss_pred CCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf 616 (618)
...........||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 234 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~ 283 (391)
T PHA03212 234 DINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSL 283 (391)
T ss_pred cccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence 32222333467999999999999999999999999999999999999875
No 92
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.6e-34 Score=288.93 Aligned_cols=202 Identities=24% Similarity=0.392 Sum_probs=171.7
Q ss_pred hcCCcccceeccCccceEEEEEEc----CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
.++|+..+.||+|+||.||+|.+. .+..||+|.++... .......+.+|+..+++++||||+++++++...+..+
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 82 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC-SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMM 82 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcE
Confidence 456888899999999999999764 35689999997653 3344567899999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||+++|+|.+++.. ....+++..++.++.|++.||+|||+. +++||||||+||+++.++.+|++|||.+..
T Consensus 83 lv~e~~~~~~L~~~l~~---~~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~ 156 (266)
T cd05064 83 IVTEYMSNGALDSFLRK---HEGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQE 156 (266)
T ss_pred EEEEeCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCccccc
Confidence 99999999999999863 235689999999999999999999999 999999999999999999999999998755
Q ss_pred CCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.............++..|+|||.+.+..++.++|||||||++||+++ |+.||.
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~ 210 (266)
T cd05064 157 DKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYW 210 (266)
T ss_pred ccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcC
Confidence 42221111122345678999999999999999999999999999875 999985
No 93
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.1e-34 Score=298.96 Aligned_cols=194 Identities=28% Similarity=0.410 Sum_probs=163.2
Q ss_pred ceeccCccceEEEEEEc-CCcEEEEEEcCccccc-HHHHHHHHHHH-HHhhcCCCCcccccceEEeeCCeEEEEEEecCC
Q 007107 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAV-SNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~e~-~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 492 (618)
+.||+|+||.||+|... +++.||+|++...... ......+..|. .+++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999876 4788999998754321 22233444444 456778999999999999999999999999999
Q ss_pred CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccc
Q 007107 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (618)
Q Consensus 493 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~ 572 (618)
|+|.++++ ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~~~----~~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~-~~ 152 (325)
T cd05602 81 GELFYHLQ----RERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-GT 152 (325)
T ss_pred CcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCC-CC
Confidence 99999886 345678888999999999999999999 99999999999999999999999999987543222 12
Q ss_pred cccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 197 (325)
T cd05602 153 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFY 197 (325)
T ss_pred cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCC
Confidence 234579999999999999999999999999999999999999995
No 94
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1e-34 Score=298.52 Aligned_cols=194 Identities=28% Similarity=0.425 Sum_probs=164.0
Q ss_pred ceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHH-HHhhcCCCCcccccceEEeeCCeEEEEEEecCC
Q 007107 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAV-SNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~-~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 492 (618)
+.||+|+||.||+|+.. +|+.||+|++..... .......+..|. .+++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999875 588999999865432 222334455554 457888999999999999999999999999999
Q ss_pred CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccc
Q 007107 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (618)
Q Consensus 493 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~ 572 (618)
|+|.+.+. ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (321)
T cd05603 81 GELFFHLQ----RERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-ET 152 (321)
T ss_pred CCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-Cc
Confidence 99988875 345688889999999999999999998 99999999999999999999999999987532222 12
Q ss_pred cccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 197 (321)
T cd05603 153 TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFY 197 (321)
T ss_pred cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCC
Confidence 234579999999999999999999999999999999999999995
No 95
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.9e-34 Score=302.82 Aligned_cols=199 Identities=26% Similarity=0.388 Sum_probs=171.6
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC-----eEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG-----QRL 484 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 484 (618)
+|+..+.||+|+||.||+|... +|+.||+|++..........+.+.+|+++++.++||||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4678889999999999999864 6899999998765444445677889999999999999999999998776 789
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+|+||+. ++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 81 lv~e~~~-~~l~~~~~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 81 VVTELMQ-SDLHKIIV----SPQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARV 152 (372)
T ss_pred EEeeccc-cCHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceee
Confidence 9999997 57877774 345789999999999999999999999 999999999999999999999999999976
Q ss_pred CCCCCccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.............+++.|+|||++.+. .++.++||||+||++|||++|+.||+
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 206 (372)
T cd07853 153 EEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQ 206 (372)
T ss_pred cccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCC
Confidence 543333333445789999999999874 47899999999999999999999995
No 96
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.6e-34 Score=296.14 Aligned_cols=194 Identities=25% Similarity=0.412 Sum_probs=164.3
Q ss_pred ceeccCccceEEEEEEcC-CcEEEEEEcCccccc-HHHHHHHHHHHHHhhc-CCCCcccccceEEeeCCeEEEEEEecCC
Q 007107 416 FLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALS-LQEEDNFLEAVSNMSR-LRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~ 492 (618)
+.||+|+||.||+|...+ ++.||+|.++..... ......+..|..++.. ++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 369999999999998764 789999998754321 1233445566666665 5899999999999999999999999999
Q ss_pred CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccc
Q 007107 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (618)
Q Consensus 493 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~ 572 (618)
|+|.++++. ...+++.++..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||++........ .
T Consensus 81 g~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 152 (316)
T cd05619 81 GDLMFHIQS----CHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA-K 152 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC-c
Confidence 999999862 35688999999999999999999999 999999999999999999999999999865322211 2
Q ss_pred cccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~ 197 (316)
T cd05619 153 TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFH 197 (316)
T ss_pred eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCC
Confidence 234579999999999999999999999999999999999999995
No 97
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.5e-34 Score=296.54 Aligned_cols=194 Identities=23% Similarity=0.388 Sum_probs=164.7
Q ss_pred ceeccCccceEEEEEEc-CCcEEEEEEcCccccc-HHHHHHHHHHHHHhhc-CCCCcccccceEEeeCCeEEEEEEecCC
Q 007107 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSR-LRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~ 492 (618)
+.||+|+||.||+|+.. +|+.||+|.++..... ......+..|..++.. .+||||+++++++.+.+..++||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 36999999999999876 5889999999754321 1233455666776664 4899999999999999999999999999
Q ss_pred CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccc
Q 007107 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (618)
Q Consensus 493 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~ 572 (618)
|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~i~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (316)
T cd05620 81 GDLMFHIQ----DKGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD-NR 152 (316)
T ss_pred CcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCC-Cc
Confidence 99999886 245688999999999999999999999 99999999999999999999999999986432211 22
Q ss_pred cccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~ 197 (316)
T cd05620 153 ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFH 197 (316)
T ss_pred eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCC
Confidence 234679999999999999999999999999999999999999996
No 98
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.6e-34 Score=297.26 Aligned_cols=200 Identities=23% Similarity=0.362 Sum_probs=169.4
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCC-CCcccccceEEeeCCeEEEEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 487 (618)
+|+..+.||+|+||.||+|... +|+.||+|++..... .......+..|..++..+. |++|+++++++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3667789999999999999865 588999999875432 2233456777888888775 577888999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++|+|.+++. ....+++.++..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++....
T Consensus 81 Ey~~~g~L~~~i~----~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~ 153 (323)
T cd05615 81 EYVNGGDLMYHIQ----QVGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV 153 (323)
T ss_pred cCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence 9999999999886 345689999999999999999999999 999999999999999999999999999875432
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 154 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~ 203 (323)
T cd05615 154 DG-VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG 203 (323)
T ss_pred CC-ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCC
Confidence 21 122345699999999999998999999999999999999999999963
No 99
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.5e-34 Score=297.84 Aligned_cols=194 Identities=26% Similarity=0.413 Sum_probs=167.6
Q ss_pred ceeccCccceEEEEEEc-CCcEEEEEEcCccccc-HHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEEEEEecCC
Q 007107 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 492 (618)
+.||+|+||.||+|... +++.||+|+++..... ....+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999875 4789999999765332 23445678888888887 699999999999999999999999999
Q ss_pred CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccc
Q 007107 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (618)
Q Consensus 493 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~ 572 (618)
|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||++....... ..
T Consensus 81 ~~L~~~~~----~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (327)
T cd05617 81 GDLMFHMQ----RQRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG-DT 152 (327)
T ss_pred CcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCC-Cc
Confidence 99998885 235689999999999999999999999 99999999999999999999999999987532221 12
Q ss_pred cccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~ 197 (327)
T cd05617 153 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD 197 (327)
T ss_pred eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCC
Confidence 234679999999999999999999999999999999999999995
No 100
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.8e-34 Score=292.35 Aligned_cols=200 Identities=26% Similarity=0.410 Sum_probs=164.8
Q ss_pred cCCcccceeccCccceEEEEEEc--CCcEEEEEEcCcccccHHHHHHHHHHHHHhhc---CCCCcccccceEEee-----
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA--NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR---LRHPNIVTLAGYCAE----- 479 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~--~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~---l~h~niv~l~~~~~~----- 479 (618)
++|+..+.||+|+||.||+|+.. +|+.||+|+++...........+.+|+..++. ++||||+++++++..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36888899999999999999763 46889999987544332223445566666554 479999999998853
Q ss_pred CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeec
Q 007107 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (618)
Q Consensus 480 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Df 559 (618)
....++||||++ ++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccc
Confidence 346899999996 5898888632 234589999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 560 GLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 560 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 155 g~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~ 210 (290)
T cd07862 155 GLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR 210 (290)
T ss_pred cceEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcC
Confidence 999765432 22234578999999999998899999999999999999999999996
No 101
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=2e-36 Score=282.90 Aligned_cols=197 Identities=28% Similarity=0.469 Sum_probs=176.0
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
-|.+.+.||+|+||.||+|.++ .|.++|||.+... ...+++..|+.+|++++.|+||++||.|.....+|+||||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEY 109 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEY 109 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhh
Confidence 3667778999999999999765 5999999998643 2567889999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
|..|+..+.++. ....+++.++..+....+.||+|||-. .-||||||+.|||++.+|++|++|||.+....+.
T Consensus 110 CGAGSiSDI~R~---R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT- 182 (502)
T KOG0574|consen 110 CGAGSISDIMRA---RRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT- 182 (502)
T ss_pred cCCCcHHHHHHH---hcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhh-
Confidence 999999999974 356799999999999999999999998 7799999999999999999999999998655322
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
-.....+.|||-|||||++..-.|..++||||||+...||..|++||.+
T Consensus 183 MAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsD 231 (502)
T KOG0574|consen 183 MAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSD 231 (502)
T ss_pred HHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccc
Confidence 2233567899999999999999999999999999999999999999974
No 102
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-35 Score=305.11 Aligned_cols=200 Identities=30% Similarity=0.474 Sum_probs=173.4
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC------eE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG------QR 483 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~ 483 (618)
.|...+.||+|+||.||+|+++ .|+.||||.+.... .....+...+|++++++++|||||+++++-++.. ..
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 3556678999999999999865 59999999998654 4445677889999999999999999999876544 56
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeec--CCCC--cEEeec
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD--DELN--PHLSDC 559 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~--~~~~--~kl~Df 559 (618)
.+|||||.+|||...++.-. +...+++.+.+.+..+++.||.|||++ +|+||||||.||++- ++|. -||+||
T Consensus 93 vlvmEyC~gGsL~~~L~~PE-N~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDf 168 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPE-NAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDF 168 (732)
T ss_pred eEEEeecCCCcHHHHhcCcc-cccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecc
Confidence 89999999999999997543 456799999999999999999999998 999999999999984 3343 599999
Q ss_pred cccccCCCCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 560 GLAALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 560 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|.|+..++.. ...+.+||..|.+||++.. +.|+..+|.|||||++|++.||..||.
T Consensus 169 G~Arel~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~ 225 (732)
T KOG4250|consen 169 GAARELDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFI 225 (732)
T ss_pred cccccCCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCC
Confidence 9999886544 5567899999999999984 889999999999999999999999995
No 103
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-34 Score=289.89 Aligned_cols=192 Identities=23% Similarity=0.409 Sum_probs=165.5
Q ss_pred ceeccCccceEEEEEEcCCcEEEEEEcCcccccHH-HHHHHHHHHHHhhcCCCCcccccceEEee----CCeEEEEEEec
Q 007107 416 FLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQ-EEDNFLEAVSNMSRLRHPNIVTLAGYCAE----HGQRLLVYEYV 490 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~ 490 (618)
..||+|++|.||+|.+ +|+.||+|+++....... ..+.+.+|++++++++||||+++++++.+ ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 5799999999999988 589999999976543222 24678899999999999999999999876 34689999999
Q ss_pred CCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCc
Q 007107 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570 (618)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~ 570 (618)
++|+|.++++ ....+++.....++.|++.||+|||+.. +++||||||+||++++++.+||+|||+++......
T Consensus 105 ~~g~L~~~l~----~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~- 177 (283)
T PHA02988 105 TRGYLREVLD----KEKDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP- 177 (283)
T ss_pred CCCcHHHHHh----hCCCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc-
Confidence 9999999996 3456889999999999999999999842 78899999999999999999999999987653321
Q ss_pred cccccccccccccCcccccc--CCccccchhhhHHHHHHHHHhCCCCCCC
Q 007107 571 QVSTQMVGAFGYSAPEFALS--GIYTVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
....|+..|+|||++.+ ..++.++|||||||++|||++|+.||+.
T Consensus 178 ---~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~ 224 (283)
T PHA02988 178 ---FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFEN 224 (283)
T ss_pred ---ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCC
Confidence 23468899999999976 6799999999999999999999999963
No 104
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.1e-34 Score=292.76 Aligned_cols=205 Identities=28% Similarity=0.480 Sum_probs=171.1
Q ss_pred hcCCcccceeccCccceEEEEEEcC-----------------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCccc
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFAN-----------------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~-----------------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 471 (618)
..+|...+.||+|+||.||+|.+.+ +..||+|.+.... ......++.+|++++.+++||||+
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCee
Confidence 4578888999999999999997542 3469999987543 334466799999999999999999
Q ss_pred ccceEEeeCCeEEEEEEecCCCChhhhhhcccC---------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 007107 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD---------------SSKNLTWNARVRVALGTARALEYLHEVCLPSV 536 (618)
Q Consensus 472 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 536 (618)
++++++.+.+..++||||+++|+|.+++..... ....+++..+.+++.|++.||+|||+. +|
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i 159 (304)
T cd05096 83 RLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NF 159 (304)
T ss_pred EEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cc
Confidence 999999999999999999999999998854211 113478889999999999999999999 99
Q ss_pred eecCCCCCCeeecCCCCcEEeeccccccCCCCCcc-ccccccccccccCccccccCCccccchhhhHHHHHHHHHh--CC
Q 007107 537 VHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT--GR 613 (618)
Q Consensus 537 iH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt--g~ 613 (618)
+||||||+|||+++++.+||+|||+++........ ......++..|+|||++.+..++.++||||||+++|||++ +.
T Consensus 160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred cccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCC
Confidence 99999999999999999999999999765433221 1223356789999999998899999999999999999987 66
Q ss_pred CCCC
Q 007107 614 KPLD 617 (618)
Q Consensus 614 ~Pf~ 617 (618)
.||.
T Consensus 240 ~p~~ 243 (304)
T cd05096 240 QPYG 243 (304)
T ss_pred CCCC
Confidence 7774
No 105
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.2e-34 Score=298.45 Aligned_cols=194 Identities=28% Similarity=0.417 Sum_probs=164.7
Q ss_pred ceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHH-HhhcCCCCcccccceEEeeCCeEEEEEEecCC
Q 007107 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVS-NMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 492 (618)
+.||+|+||.||+|... +|+.||+|++..... .......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 36999999999999765 589999999875432 2223344555544 46778999999999999999999999999999
Q ss_pred CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccc
Q 007107 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (618)
Q Consensus 493 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~ 572 (618)
|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++....... .
T Consensus 81 ~~L~~~l~----~~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~-~ 152 (325)
T cd05604 81 GELFFHLQ----RERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD-T 152 (325)
T ss_pred CCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC-C
Confidence 99998885 345789999999999999999999999 999999999999999999999999999875432221 2
Q ss_pred cccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~ 197 (325)
T cd05604 153 TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFY 197 (325)
T ss_pred cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCC
Confidence 234579999999999999999999999999999999999999995
No 106
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-36 Score=275.79 Aligned_cols=200 Identities=26% Similarity=0.401 Sum_probs=176.1
Q ss_pred hcCCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.+.|+..+.||+|.|+.||++.+ ..|+.+|+|.+.....+....+++.+|+.+-+.++||||+++.+.+.+.+..|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 45788888999999999999854 46999999999877666667788999999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeec---CCCCcEEeecccccc
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD---DELNPHLSDCGLAAL 564 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~---~~~~~kl~Dfgl~~~ 564 (618)
|+|+|++|..-+- .....++..+..+++||+++|.|+|.+ +|||||+||+|+++. ..--+|++|||++..
T Consensus 90 e~m~G~dl~~eIV----~R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 90 DLVTGGELFEDIV----AREFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred ecccchHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEE
Confidence 9999999976553 124567888899999999999999999 999999999999996 334589999999987
Q ss_pred CCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. ......+.+|||+|||||++...+|+..+|||+-|||+|-|+.|.+||-
T Consensus 163 l~--~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~ 213 (355)
T KOG0033|consen 163 VN--DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW 213 (355)
T ss_pred eC--CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCC
Confidence 76 3334456799999999999999999999999999999999999999994
No 107
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-34 Score=295.48 Aligned_cols=200 Identities=29% Similarity=0.415 Sum_probs=178.8
Q ss_pred hhcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccH-HHHHHHHHHHHHhhcCC-CCcccccceEEeeCCeEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSL-QEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~ 484 (618)
....|+..+.||+|.||.||++..+. |+.+|+|.+.+..... .....+.+|+++|+++. |||||.+++++++....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 44567888899999999999998775 9999999997665432 24567899999999998 999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC----CCcEEeecc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE----LNPHLSDCG 560 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~----~~~kl~Dfg 560 (618)
+|||++.||.|.+.+... .+++..+..++.|++.+++|||+. ||+||||||+|+|+... +.+|++|||
T Consensus 113 lvmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFG 184 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFG 184 (382)
T ss_pred EEEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence 999999999999998633 399999999999999999999998 99999999999999633 479999999
Q ss_pred ccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++..... .......+||+.|+|||++....|+..+||||+||++|.|+.|..||.
T Consensus 185 la~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~ 239 (382)
T KOG0032|consen 185 LAKFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFW 239 (382)
T ss_pred CceEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCc
Confidence 9988765 444566899999999999999999999999999999999999999996
No 108
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=5e-34 Score=283.67 Aligned_cols=199 Identities=29% Similarity=0.472 Sum_probs=172.7
Q ss_pred cCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
++|+..+.||+|+||.||++.+.++..+|+|.+...... ..++.+|++++++++||||+++++++...+..++||||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~ 80 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMS---EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEF 80 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCcc---HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEc
Confidence 457778899999999999999988889999988754322 45688899999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++|+|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||.++......
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05114 81 MENGCLLNYLRQR---QGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE 154 (256)
T ss_pred CCCCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCc
Confidence 9999999988632 34688999999999999999999999 99999999999999999999999999987654332
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
........++..|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~ 203 (256)
T cd05114 155 YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFE 203 (256)
T ss_pred eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCC
Confidence 222223345678999999998889999999999999999999 999986
No 109
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3.4e-34 Score=294.15 Aligned_cols=194 Identities=24% Similarity=0.395 Sum_probs=166.6
Q ss_pred ceeccCccceEEEEEEcC-CcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEEEEEecCC
Q 007107 416 FLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 492 (618)
+.||+|+||.||+|+... ++.||+|+++.... .......+..|.++++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 369999999999998764 78999999875432 223345667788888777 699999999999999999999999999
Q ss_pred CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccc
Q 007107 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (618)
Q Consensus 493 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~ 572 (618)
|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++...... ..
T Consensus 81 ~~L~~~~~----~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~ 152 (318)
T cd05570 81 GDLMFHIQ----RSGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG-VT 152 (318)
T ss_pred CCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCC-Cc
Confidence 99998886 345789999999999999999999999 99999999999999999999999999986532221 12
Q ss_pred cccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 153 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~ 197 (318)
T cd05570 153 TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFE 197 (318)
T ss_pred ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCC
Confidence 233578999999999999999999999999999999999999996
No 110
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=5.8e-34 Score=296.85 Aligned_cols=196 Identities=24% Similarity=0.403 Sum_probs=165.6
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
..+|+..+.||+|+||.||+|.+. +|+.||+|++.... .......+.+|+++++.++|+||+++++++...+..++||
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 151 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLL 151 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEE
Confidence 356777889999999999999865 58999999986443 3344567899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++|+|.+.. ...+..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 152 e~~~~~~L~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~ 220 (353)
T PLN00034 152 EFMDGGSLEGTH--------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQ 220 (353)
T ss_pred ecCCCCcccccc--------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccc
Confidence 999999986532 245677888999999999999999 999999999999999999999999999976543
Q ss_pred CCccccccccccccccCcccccc-----CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALS-----GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... ......||..|+|||++.. ...+.++|||||||++|||++|+.||.
T Consensus 221 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~ 274 (353)
T PLN00034 221 TMD-PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFG 274 (353)
T ss_pred ccc-cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence 221 1234579999999998853 224568999999999999999999995
No 111
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=5e-34 Score=288.36 Aligned_cols=200 Identities=28% Similarity=0.408 Sum_probs=172.7
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCccccc-HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
.|+..+.||+|+||.||++... +++.||+|++...... ......+.+|+.++++++||||+++++.+...+..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 3677889999999999999865 5899999998754322 2234567789999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 81 LMNGGDLKFHIYNM--GNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred ccCCCcHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence 99999999887532 235689999999999999999999999 9999999999999999999999999999765432
Q ss_pred CccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. .....|++.|+|||++.+..++.++||||+||++|||++|+.||.
T Consensus 156 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~ 202 (285)
T cd05605 156 ET--IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFR 202 (285)
T ss_pred Cc--cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCC
Confidence 21 233578999999999999899999999999999999999999996
No 112
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=6.1e-34 Score=294.04 Aligned_cols=199 Identities=25% Similarity=0.426 Sum_probs=174.2
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.++|+..+.||+|+||.||++.+. ++..+|+|.+.... .......+.+|++++++++||||+++++++.+.+..++||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence 467899999999999999999876 57888999876543 3344567899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++|+|.++++. ...+++..+..++.|++.||+|||+.+ +|+||||||+|||+++++.+||+|||++.....
T Consensus 83 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~ 156 (333)
T cd06650 83 EHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (333)
T ss_pred ecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhh
Confidence 99999999999863 346888999999999999999999752 799999999999999999999999999875532
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. ......|+..|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 157 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~ 203 (333)
T cd06650 157 S---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIP 203 (333)
T ss_pred h---ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 2 1233568999999999999899999999999999999999999985
No 113
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=6.4e-34 Score=315.70 Aligned_cols=205 Identities=26% Similarity=0.369 Sum_probs=174.0
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
++|+..+.||+|+||.||+|... .|+.||+|++..... .....+++.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 47888999999999999999876 489999999875432 2334567899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccC-------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecc
Q 007107 488 EYVGNGNLHDMLHFADD-------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfg 560 (618)
||+++|+|.++++.... .....++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 99999999998864211 123456778899999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCc-----------------cccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTER-----------------QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+++....... ......+||+.|+|||++.+..++.++|||||||++|||+||+.||.
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~ 232 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYR 232 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCC
Confidence 9976521110 01122469999999999999999999999999999999999999996
No 114
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=288.52 Aligned_cols=202 Identities=27% Similarity=0.416 Sum_probs=180.8
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
..-|..++.||+|.|..|-+|++- .|++||||++.+...+......+..|+..|+.++|||||++|++......+|||+
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 456888889999999999999654 6999999999988887777888999999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeec-CCCCcEEeeccccccCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD-DELNPHLSDCGLAALTP 566 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~-~~~~~kl~Dfgl~~~~~ 566 (618)
|.=++|+|++++-. ....+.+..+.+++.||++|+.|+|+. .+|||||||+||.+- .-|-||+.|||++-.+.
T Consensus 97 ELGD~GDl~DyImK---He~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~ 170 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMK---HEEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ 170 (864)
T ss_pred EecCCchHHHHHHh---hhccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCC
Confidence 99999999999963 345688999999999999999999999 899999999999775 56889999999997765
Q ss_pred CCCccccccccccccccCccccccCCcc-ccchhhhHHHHHHHHHhCCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYT-VKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
+.. .-+..+|+..|-|||++.+..|+ +++||||||||||-|+.|++||++
T Consensus 171 PG~--kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqe 221 (864)
T KOG4717|consen 171 PGK--KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQE 221 (864)
T ss_pred Ccc--hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCcccc
Confidence 433 23457999999999999999995 789999999999999999999974
No 115
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=3.6e-34 Score=300.11 Aligned_cols=207 Identities=28% Similarity=0.464 Sum_probs=172.6
Q ss_pred hhhcCCcccceeccCccceEEEEEEc------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEee
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAE 479 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 479 (618)
...++|+..+.||+|+||.||+|... +++.||+|+++... .......+.+|+++++.+ +|+||+++++++..
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~ 113 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA-HTDEREALMSELKILSHLGQHKNIVNLLGACTH 113 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC-CHHHHHHHHHHHHHHHhhccCCceeeEeeEecC
Confidence 44567889999999999999998742 24579999997543 233456788999999999 89999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhhcccC-------------------------------------------------------
Q 007107 480 HGQRLLVYEYVGNGNLHDMLHFADD------------------------------------------------------- 504 (618)
Q Consensus 480 ~~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------- 504 (618)
.+..++||||+++|+|.++++....
T Consensus 114 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (374)
T cd05106 114 GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQ 193 (374)
T ss_pred CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccc
Confidence 9999999999999999998853210
Q ss_pred -----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCcc-c
Q 007107 505 -----------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ-V 572 (618)
Q Consensus 505 -----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~-~ 572 (618)
....+++..+.+++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++........ .
T Consensus 194 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~ 270 (374)
T cd05106 194 SSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVV 270 (374)
T ss_pred cccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceee
Confidence 113478889999999999999999998 9999999999999999999999999999765432221 1
Q ss_pred cccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 271 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~ 316 (374)
T cd05106 271 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYP 316 (374)
T ss_pred ccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCc
Confidence 122345678999999999999999999999999999997 999985
No 116
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=4.9e-34 Score=299.33 Aligned_cols=206 Identities=28% Similarity=0.457 Sum_probs=172.3
Q ss_pred hhcCCcccceeccCccceEEEEEE------cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeC
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEF------ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEH 480 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 480 (618)
..++|+..+.||+|+||.||+|.+ ..+..||+|+++... .....+.+.+|++++..+ +||||+++++++...
T Consensus 33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~ 111 (375)
T cd05104 33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHINIVNLLGACTVG 111 (375)
T ss_pred chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc-CcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence 355788899999999999999963 235689999987543 233456788999999999 899999999999999
Q ss_pred CeEEEEEEecCCCChhhhhhcccC--------------------------------------------------------
Q 007107 481 GQRLLVYEYVGNGNLHDMLHFADD-------------------------------------------------------- 504 (618)
Q Consensus 481 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 504 (618)
+..++||||+++|+|.++++....
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 999999999999999998864221
Q ss_pred ---------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 505 ---------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 505 ---------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
....+++..+..++.||++||+|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 268 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDS 268 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcc
Confidence 112578889999999999999999998 99999999999999999999999999997654332
Q ss_pred ccc-cccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 570 RQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 570 ~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
... .....++..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 269 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~ 318 (375)
T cd05104 269 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYP 318 (375)
T ss_pred cccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCC
Confidence 211 112345678999999999999999999999999999998 899985
No 117
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-34 Score=306.85 Aligned_cols=206 Identities=23% Similarity=0.333 Sum_probs=171.0
Q ss_pred hhcCCcccceeccCccceEEEEEEcCC-cEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-CCcccccceE-Eee-----
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFANG-KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGY-CAE----- 479 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~g-~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~-~~~----- 479 (618)
...++++++.|.+|||+.||.|....+ ..||+|++... +......+++|+++|++++ |+|||.+++. ...
T Consensus 35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~ 112 (738)
T KOG1989|consen 35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNN 112 (738)
T ss_pred CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCC
Confidence 345677888999999999999988766 99999998755 4556788999999999996 9999999993 321
Q ss_pred -CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEee
Q 007107 480 -HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSD 558 (618)
Q Consensus 480 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~D 558 (618)
.-+.+|.||||.+|.|-|++...- ...+++.++++|+.|+++|+++||.. .|+|||||||-+||||+.+++.||||
T Consensus 113 ~~~EvllLmEyC~gg~Lvd~mn~Rl--q~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCD 189 (738)
T KOG1989|consen 113 GVWEVLLLMEYCKGGSLVDFMNTRL--QTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCD 189 (738)
T ss_pred ceeEEEeehhhccCCcHHHHHHHHH--hccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCc
Confidence 136789999999999999997432 33499999999999999999999987 46799999999999999999999999
Q ss_pred ccccccCCCCC-ccc-----c--ccccccccccCccccc---cCCccccchhhhHHHHHHHHHhCCCCCCC
Q 007107 559 CGLAALTPNTE-RQV-----S--TQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 559 fgl~~~~~~~~-~~~-----~--~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
||.+...-... ... . -....|+.|+|||++. +..+++|+|||||||+||-|+....||+.
T Consensus 190 FGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~ 260 (738)
T KOG1989|consen 190 FGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEE 260 (738)
T ss_pred ccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCc
Confidence 99986322111 110 0 1135789999999984 66789999999999999999999999984
No 118
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-35 Score=316.26 Aligned_cols=208 Identities=27% Similarity=0.330 Sum_probs=184.7
Q ss_pred hhhhhhhcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCccc-ccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC
Q 007107 403 ASLQTATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAA-LSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH 480 (618)
Q Consensus 403 ~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 480 (618)
..+.....+|.+.++||+|+||.|..++++. +++||+|++.+-. ....+...|.+|-.+|..-+.+=|++++-.|.++
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 3456667899999999999999999998864 8899999997532 2334567789999999888888899999999999
Q ss_pred CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecc
Q 007107 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (618)
Q Consensus 481 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfg 560 (618)
.++|+|||||+||+|-.++.. ..++++..++.++..|+-||.-+|+. |+|||||||+|||+|..|++||+|||
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk----~~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFG 220 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSK----FDRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFG 220 (1317)
T ss_pred cceEEEEecccCchHHHHHhh----cCCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccch
Confidence 999999999999999999963 23799999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccCccccc----c-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFAL----S-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.+-.+..++...+...+|||.|.+||++. + +.|++..|+||+||++|||+.|..||-
T Consensus 221 sClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY 282 (1317)
T KOG0612|consen 221 SCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY 282 (1317)
T ss_pred hHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch
Confidence 99888777776777789999999999995 2 569999999999999999999999993
No 119
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-35 Score=275.06 Aligned_cols=202 Identities=25% Similarity=0.379 Sum_probs=178.0
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
.-++|+..++||+|.||.|.+++-+ .|+.||+|++++... ...+...-+.|-.+++..+||.+..+.-.|...+++++
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 3467888899999999999999655 589999999987654 34445666788899999999999999888999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||..||.|.-++. ....+++...+-+-..|+.||.|||++ +||.||||.+|.|+|.||++||+|||+++.-
T Consensus 246 VMeyanGGeLf~HLs----rer~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~ 318 (516)
T KOG0690|consen 246 VMEYANGGELFFHLS----RERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEE 318 (516)
T ss_pred EEEEccCceEeeehh----hhhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhc
Confidence 999999999998885 345688888889999999999999999 9999999999999999999999999999765
Q ss_pred CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... ..+..++|||.|+|||++....|+..+|+|.+||+||||+.|+.||-
T Consensus 319 I~~g-~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFy 369 (516)
T KOG0690|consen 319 IKYG-DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFY 369 (516)
T ss_pred cccc-ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccc
Confidence 4333 33456899999999999999999999999999999999999999984
No 120
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.4e-33 Score=283.90 Aligned_cols=193 Identities=28% Similarity=0.426 Sum_probs=165.8
Q ss_pred eccCccceEEEEEEc-CCcEEEEEEcCcccccH-HHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCCCh
Q 007107 418 IGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL-QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNL 495 (618)
Q Consensus 418 Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 495 (618)
||+|+||.||+++.. +|+.||+|++....... .....+..|++++++++||||+++++++......++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999875 58999999987543322 2234556799999999999999999999999999999999999999
Q ss_pred hhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCcccccc
Q 007107 496 HDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQ 575 (618)
Q Consensus 496 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~~~~ 575 (618)
.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||++........ ...
T Consensus 81 ~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~--~~~ 153 (277)
T cd05607 81 KYHIYNV--GERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT--ITQ 153 (277)
T ss_pred HHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCce--eec
Confidence 9887532 234588999999999999999999999 999999999999999999999999999876543221 223
Q ss_pred ccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 576 MVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 576 ~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..|+..|+|||++.+..++.++||||+||++|||++|+.||.
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~ 195 (277)
T cd05607 154 RAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFK 195 (277)
T ss_pred cCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCC
Confidence 468999999999999889999999999999999999999985
No 121
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-34 Score=263.53 Aligned_cols=208 Identities=26% Similarity=0.404 Sum_probs=176.0
Q ss_pred hhcCCcccceeccCccceEEEEE-EcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee-----CC
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE-----HG 481 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~ 481 (618)
-.++|.+.+.||+|||+-||.++ ..+++.||+|++.-.. .++.+..++|++..++++||||++++++... ..
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 34689999999999999999996 4568999999986543 4567778999999999999999999887643 34
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccc
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl 561 (618)
+.|++++|...|+|.+.++.....+..+++.+++.|+.++++||++||+.. |.++||||||.|||+++++.++|.|||.
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccC
Confidence 589999999999999999877767778999999999999999999999983 3599999999999999999999999999
Q ss_pred cccCCCCCcccc--------ccccccccccCccccc---cCCccccchhhhHHHHHHHHHhCCCCCCC
Q 007107 562 AALTPNTERQVS--------TQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 562 ~~~~~~~~~~~~--------~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
++..+-...... .....|..|+|||.+. +...++++|||||||++|+|+.|.-||++
T Consensus 176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~ 243 (302)
T KOG2345|consen 176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFER 243 (302)
T ss_pred ccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchH
Confidence 876542211110 1235788999999985 44578999999999999999999999985
No 122
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.1e-33 Score=282.12 Aligned_cols=202 Identities=26% Similarity=0.455 Sum_probs=175.4
Q ss_pred hhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
..++|+..+.||+|++|.||+|...+++.||+|.+.... ...+.+.+|+.++++++|+||+++++.+...+..+++|
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT---MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc---hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence 346788889999999999999998888999999986533 23567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++++|.++++.. ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 81 EYMAKGSLLDFLKSD--EGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIED 155 (261)
T ss_pred ecCCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCC
Confidence 999999999998632 345688889999999999999999998 999999999999999999999999999987654
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
..........++..|+|||++.+..++.++|||||||++|||+| |+.||.
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~ 206 (261)
T cd05072 156 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYP 206 (261)
T ss_pred CceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCC
Confidence 32222223346778999999998889999999999999999998 999985
No 123
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.5e-33 Score=294.62 Aligned_cols=198 Identities=25% Similarity=0.322 Sum_probs=169.6
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC-----
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG----- 481 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 481 (618)
..++|+..+.||+|+||.||++... .|+.||+|++............+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 3578999999999999999999765 5899999999765544455677889999999999999999999986543
Q ss_pred -eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecc
Q 007107 482 -QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (618)
Q Consensus 482 -~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfg 560 (618)
..++||||+++ ++.+.++ ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg 168 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIH------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 168 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHh------ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCC
Confidence 47999999975 5666553 2478888999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 169 ~a~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~ 223 (359)
T cd07876 169 LARTACTN--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQ 223 (359)
T ss_pred CccccccC--ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence 99754322 22234578999999999999999999999999999999999999995
No 124
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.5e-33 Score=289.31 Aligned_cols=201 Identities=28% Similarity=0.474 Sum_probs=169.9
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCc----EEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
..+|+..+.||+|+||.||+|.+. +++ .||+|.++... .....+++.+|+.+++.++||||+++++++... ..
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~ 83 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV 83 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cc
Confidence 356888999999999999999764 333 38999987432 334567788999999999999999999998764 57
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++|+||+++|+|.++++. ....+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 84 ~~v~e~~~~g~l~~~l~~---~~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~ 157 (316)
T cd05108 84 QLITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (316)
T ss_pred eeeeecCCCCCHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccccc
Confidence 799999999999999863 234688899999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCccc-cccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 564 LTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
......... .....++..|+|||++.+..++.++|||||||++|||++ |+.||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~ 213 (316)
T cd05108 158 LLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 213 (316)
T ss_pred cccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence 765433222 122345678999999999999999999999999999998 999986
No 125
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=8e-34 Score=303.27 Aligned_cols=198 Identities=26% Similarity=0.378 Sum_probs=164.2
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC------
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH------ 480 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 480 (618)
...+|...+.||+|+||.||+|... +++.||||++.... ....+|+.+++.++||||+++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 3457999999999999999999875 58899999885322 2234689999999999999999887432
Q ss_pred --CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCC-CcEEe
Q 007107 481 --GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL-NPHLS 557 (618)
Q Consensus 481 --~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~-~~kl~ 557 (618)
...++||||+++ ++.+++.........+++..++.++.||+.||+|||+. +|+||||||+|||++.++ .+||+
T Consensus 138 ~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~ 213 (440)
T PTZ00036 138 KNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLC 213 (440)
T ss_pred CceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeee
Confidence 246789999975 78777765444567799999999999999999999999 999999999999999654 79999
Q ss_pred eccccccCCCCCccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 558 DCGLAALTPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 558 Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|||+++....... .....||+.|+|||++.+. .|+.++|||||||++|||++|++||.
T Consensus 214 DFGla~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~ 272 (440)
T PTZ00036 214 DFGSAKNLLAGQR--SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFS 272 (440)
T ss_pred ccccchhccCCCC--cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999986643322 2245789999999998764 68999999999999999999999995
No 126
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.7e-35 Score=269.41 Aligned_cols=199 Identities=31% Similarity=0.466 Sum_probs=171.7
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHH------HHHHHHHHHHHhhcC-CCCcccccceEEeeC
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQ------EEDNFLEAVSNMSRL-RHPNIVTLAGYCAEH 480 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~------~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 480 (618)
...|...++||+|..++|.++.++ .|+++|+|++........ -.+.-+.|+.+++++ .||+|+++.++++.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 456778889999999999998655 589999999864432211 123346789999987 799999999999999
Q ss_pred CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecc
Q 007107 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (618)
Q Consensus 481 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfg 560 (618)
...++|+|.|+.|.|+|++. ..-.++++...+|+.|+.+|++|||.+ +||||||||+|||++++..+||+|||
T Consensus 96 sF~FlVFdl~prGELFDyLt----s~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFG 168 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLT----SKVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFG 168 (411)
T ss_pred chhhhhhhhcccchHHHHhh----hheeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccc
Confidence 99999999999999999996 455789999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccCccccc------cCCccccchhhhHHHHHHHHHhCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFAL------SGIYTVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlG~il~elltg~~Pf 616 (618)
+++.....+. -...+|||+|+|||.+. ...|+..+|+||.|||||.|+.|-+||
T Consensus 169 Fa~~l~~Gek--LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPF 228 (411)
T KOG0599|consen 169 FACQLEPGEK--LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPF 228 (411)
T ss_pred eeeccCCchh--HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCch
Confidence 9998865543 34579999999999985 345888999999999999999999998
No 127
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.1e-33 Score=314.83 Aligned_cols=211 Identities=24% Similarity=0.372 Sum_probs=176.2
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee--CC
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE--HG 481 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~ 481 (618)
.+...++|.+.+.||+|+||.||+|.... ++.+|+|.+............+..|+.++++++||||+++++++.. ..
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~ 87 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQ 87 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCC
Confidence 44556789999999999999999998764 7788999987665555667789999999999999999999998854 35
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCC----CCceecCCCCCCeeecCC------
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL----PSVVHRNFKSANILLDDE------ 551 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~----~~iiH~Dlkp~NiLl~~~------ 551 (618)
..++||||+++|+|.+++.........+++..++.|+.||+.||+|||+... .+||||||||+|||++.+
T Consensus 88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~ 167 (1021)
T PTZ00266 88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGK 167 (1021)
T ss_pred EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccc
Confidence 6899999999999999997544445679999999999999999999998521 259999999999999642
Q ss_pred -----------CCcEEeeccccccCCCCCccccccccccccccCcccccc--CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 552 -----------LNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALS--GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 552 -----------~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||.
T Consensus 168 i~~~~~n~ng~~iVKLsDFGlAr~l~~~s--~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~ 244 (1021)
T PTZ00266 168 ITAQANNLNGRPIAKIGDFGLSKNIGIES--MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFH 244 (1021)
T ss_pred ccccccccCCCCceEEccCCccccccccc--cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence 348999999997654321 2234579999999999864 458899999999999999999999996
No 128
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.6e-33 Score=279.41 Aligned_cols=202 Identities=26% Similarity=0.460 Sum_probs=173.9
Q ss_pred hhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
..++|+..+.||+|++|.||+|...+++.||+|.++.... ..+++.+|++.+++++||||+++++++...+..++||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM---DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc---cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence 3456888899999999999999988888999999875432 2456889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++++|.+++... ....+++..+..++.|++.|+.|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05068 81 ELMKYGSLLEYLQGG--AGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKE 155 (261)
T ss_pred ecccCCcHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccC
Confidence 999999999998632 235689999999999999999999999 999999999999999999999999999976643
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
...........+..|+|||++.+..++.++||||||+++|||+| |+.||.
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~ 206 (261)
T cd05068 156 DIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYP 206 (261)
T ss_pred CcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCC
Confidence 22221122233457999999999899999999999999999999 999985
No 129
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-34 Score=296.07 Aligned_cols=199 Identities=29% Similarity=0.455 Sum_probs=172.7
Q ss_pred CcccceeccCccceEEEEEE-cCCc----EEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 412 FSQEFLIGEGSLGRVYRAEF-ANGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~-~~g~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
....++||+|+||+||+|.| +.|+ +||+|++.... ..+..+++++|+..|.+++|||+++++++|.... ..||
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t-~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlv 775 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT-SPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLV 775 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC-CchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHH
Confidence 44567899999999999965 4444 57888876543 4456788999999999999999999999998775 8899
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
++||+.|+|.+++++ ....+..+..+.+..|||+||.|||++ +++||||.++||||..-.++||.|||+++...
T Consensus 776 tq~mP~G~LlDyvr~---hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~ 849 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVRE---HRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLA 849 (1177)
T ss_pred HHhcccchHHHHHHH---hhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccC
Confidence 999999999999986 445678889999999999999999999 99999999999999999999999999999887
Q ss_pred CCCcccc-ccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCCC
Q 007107 567 NTERQVS-TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDR 618 (618)
Q Consensus 567 ~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~~ 618 (618)
.++..+. ....-.+.|||-|.+....|+.++|||||||.+||++| |..|+++
T Consensus 850 ~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~g 903 (1177)
T KOG1025|consen 850 PDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDG 903 (1177)
T ss_pred cccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCC
Confidence 6655443 33345678999999999999999999999999999999 9999874
No 130
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.7e-33 Score=279.95 Aligned_cols=199 Identities=28% Similarity=0.459 Sum_probs=172.1
Q ss_pred cCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
++|...+.||+|+||.||+|++.++..+|+|.++..... .+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEY 80 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCccc---HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEc
Confidence 457778899999999999999887778999998754332 45688999999999999999999999988899999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+.+|+|.++++.. ...+++..++.++.|++.||+|||+. +++|+||||+||++++++.+||+|||.++......
T Consensus 81 ~~~~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05113 81 MSNGCLLNYLREH---GKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE 154 (256)
T ss_pred CCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCc
Confidence 9999999998632 33689999999999999999999999 99999999999999999999999999987654332
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
........++..|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 155 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~ 203 (256)
T cd05113 155 YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYE 203 (256)
T ss_pred eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcC
Confidence 222222345678999999998889999999999999999999 999985
No 131
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.6e-33 Score=283.15 Aligned_cols=199 Identities=28% Similarity=0.425 Sum_probs=171.8
Q ss_pred CcccceeccCccceEEEEEEc-CCcEEEEEEcCccccc-HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
|+..+.||+|+||.||++... +++.||+|.+...... ......+..|+.++++++|++|+++++.+...+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 566788999999999999765 5889999998754332 22345677899999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~g~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 82 MNGGDLKFHIYHM--GEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred cCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence 9999999988532 234588999999999999999999998 99999999999999999999999999987654322
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. .....|+..|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 157 ~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~ 202 (285)
T cd05630 157 T--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 202 (285)
T ss_pred c--ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCC
Confidence 2 123478999999999999999999999999999999999999996
No 132
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.1e-33 Score=295.50 Aligned_cols=207 Identities=27% Similarity=0.424 Sum_probs=173.2
Q ss_pred hhhcCCcccceeccCccceEEEEEEc------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-CCcccccceEEee
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAE 479 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~ 479 (618)
...++|...+.||+|+||.||+|... .+..||+|+++... .....+.+.+|+++++++. ||||+++++++.+
T Consensus 34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~ 112 (400)
T cd05105 34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLGACTK 112 (400)
T ss_pred ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc
Confidence 34567888999999999999999753 13479999997543 3345577999999999996 9999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhhcccC-------------------------------------------------------
Q 007107 480 HGQRLLVYEYVGNGNLHDMLHFADD------------------------------------------------------- 504 (618)
Q Consensus 480 ~~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------- 504 (618)
.+..++||||+++|+|.++++....
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
T cd05105 113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML 192 (400)
T ss_pred CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence 9999999999999999998864211
Q ss_pred -------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCee
Q 007107 505 -------------------------------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANIL 547 (618)
Q Consensus 505 -------------------------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiL 547 (618)
....+++..+..++.|+++||+|||+. +|+||||||+|||
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nil 269 (400)
T cd05105 193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEE
Confidence 012478888999999999999999998 9999999999999
Q ss_pred ecCCCCcEEeeccccccCCCCCcc-ccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 548 LDDELNPHLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 548 l~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
+++++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |+.||.
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~ 341 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYP 341 (400)
T ss_pred EeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCc
Confidence 999999999999999765432221 1223457788999999999999999999999999999997 999985
No 133
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2e-33 Score=279.42 Aligned_cols=199 Identities=29% Similarity=0.463 Sum_probs=170.9
Q ss_pred cCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
.+|+..+.||+|+||.||+|.+.++..+|+|.+...... ...+.+|++++++++||||+++++++...+..++||||
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMS---EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEY 80 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEec
Confidence 457778899999999999999887888999998654322 35678899999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++++|.++++.. ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++...+..
T Consensus 81 ~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~ 154 (256)
T cd05059 81 MANGCLLNYLRER---KGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ 154 (256)
T ss_pred CCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceeccccc
Confidence 9999999998632 34689999999999999999999999 99999999999999999999999999987654322
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
........++..|+|||.+.+..++.++||||||+++|||++ |+.||+
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~ 203 (256)
T cd05059 155 YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYE 203 (256)
T ss_pred ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCC
Confidence 221122234567999999999999999999999999999999 899985
No 134
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=4.7e-33 Score=276.44 Aligned_cols=201 Identities=29% Similarity=0.480 Sum_probs=177.5
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+|...+.||+|++|.||+|... +++.|++|.+..........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4677889999999999999875 589999999876555566778899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++++|.++++.. ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||++.......
T Consensus 81 ~~~~~L~~~l~~~--~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 81 AENGDLHKLLKMQ--RGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred CCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 9999999998742 245788999999999999999999998 99999999999999999999999999987664332
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. ......|++.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 202 (256)
T cd08529 156 N-FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFD 202 (256)
T ss_pred c-hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCC
Confidence 2 2234568899999999999989999999999999999999999986
No 135
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.9e-33 Score=281.83 Aligned_cols=199 Identities=27% Similarity=0.401 Sum_probs=171.6
Q ss_pred CcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccH-HHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL-QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
|+..+.||+|+||.||+|... +++.+|+|.+....... .....+.+|++++++++|+||+++.+.+...+..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 556678999999999999775 58899999986543322 2345578899999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 82 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 82 MNGGDLKFHIYNM--GNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE 156 (285)
T ss_pred ccCccHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC
Confidence 9999999888532 234689999999999999999999998 99999999999999999999999999987654322
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. .....|+..|+|||++.+..++.++|+||||+++|||++|+.||.
T Consensus 157 ~--~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~ 202 (285)
T cd05632 157 S--IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFR 202 (285)
T ss_pred c--ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCC
Confidence 1 123578999999999999999999999999999999999999995
No 136
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=5.1e-33 Score=277.46 Aligned_cols=201 Identities=27% Similarity=0.388 Sum_probs=173.1
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCccccc---HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS---LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
+.|...+.||+|++|.||+|... +++.+|+|.+...... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 46888899999999999999764 5899999998654322 2234578899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
|+||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||+|+||++++++.++|+|||++...
T Consensus 82 v~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~ 154 (263)
T cd06625 82 FMEYMPGGSVKDQLKA----YGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRL 154 (263)
T ss_pred EEEECCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceec
Confidence 9999999999998862 35688899999999999999999999 9999999999999999999999999998755
Q ss_pred CCCCcccc--ccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVS--TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
........ ....|+..|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 208 (263)
T cd06625 155 QTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWA 208 (263)
T ss_pred cccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCcc
Confidence 43221111 23467889999999999889999999999999999999999985
No 137
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=5.9e-34 Score=294.09 Aligned_cols=192 Identities=28% Similarity=0.396 Sum_probs=160.7
Q ss_pred eccCccceEEEEEEc-CCcEEEEEEcCccccc-HHHHHHHHHHHHHhhcC---CCCcccccceEEeeCCeEEEEEEecCC
Q 007107 418 IGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRL---RHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (618)
Q Consensus 418 Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 492 (618)
||+|+||.||+|+.. +++.||+|++...... ......+..|..++... .||||+++++++......++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999875 5899999998654321 22233445566665554 699999999999999999999999999
Q ss_pred CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccc
Q 007107 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (618)
Q Consensus 493 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~ 572 (618)
|+|.++++ ....+++..+..++.||++||+|||++ +|+||||||+|||+++++.+||+|||++....... ..
T Consensus 81 g~L~~~l~----~~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~~ 152 (330)
T cd05586 81 GELFWHLQ----KEGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDN-KT 152 (330)
T ss_pred ChHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-CC
Confidence 99998886 345689999999999999999999999 99999999999999999999999999986543222 22
Q ss_pred cccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 573 STQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.....||+.|+|||++.+. .++.++|||||||++|||++|+.||.
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~ 198 (330)
T cd05586 153 TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFY 198 (330)
T ss_pred ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCC
Confidence 2346799999999998764 47999999999999999999999985
No 138
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2e-33 Score=288.13 Aligned_cols=204 Identities=29% Similarity=0.442 Sum_probs=185.0
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
.+.....|.+...||+|.|+.|..|.+. .+..||||.+.+........+.+.+|+++|..++|||||+++.+.+....+
T Consensus 51 ~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~l 130 (596)
T KOG0586|consen 51 DSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATL 130 (596)
T ss_pred ccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeeccee
Confidence 4455678999999999999999999765 589999999998887777777799999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
|+||||+.+|.+++++. ..+.+.+..+..++.|+.+|++|||++ .|+|||||++|||++.+..+||+|||++.
T Consensus 131 ylV~eya~~ge~~~yl~----~~gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~ 203 (596)
T KOG0586|consen 131 YLVMEYASGGELFDYLV----KHGRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFST 203 (596)
T ss_pred EEEEEeccCchhHHHHH----hcccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccce
Confidence 99999999999999997 455666788999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCccccccccccccccCccccccCCc-cccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.+.. .......+|++.|.|||++.+.+| ++++|+||+|+++|-|+.|..|||
T Consensus 204 ~~~~--~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFD 256 (596)
T KOG0586|consen 204 FFDY--GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFD 256 (596)
T ss_pred eecc--cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccC
Confidence 7753 334456799999999999999887 689999999999999999999998
No 139
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=4.6e-33 Score=278.47 Aligned_cols=204 Identities=24% Similarity=0.405 Sum_probs=176.6
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCccc-ccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAA-LSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
++|+..+.||+|+||.||+|... +++.||+|.+.... ........+.+|+++++.++||||+++++++...+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 46888899999999999999765 68999999876432 23445567899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++++|.+++.........+++..+..++.|++.||+|||++ +++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999998865444455688999999999999999999999 999999999999999999999999999876543
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||.
T Consensus 159 ~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~ 207 (267)
T cd08228 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY 207 (267)
T ss_pred hhH-HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCc
Confidence 221 1223468889999999998889999999999999999999999984
No 140
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.6e-33 Score=292.25 Aligned_cols=198 Identities=23% Similarity=0.308 Sum_probs=169.6
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC------
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH------ 480 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 480 (618)
..++|...+.||+|+||.||+|... .++.||||++............+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3568999999999999999999765 588999999976544444566788999999999999999999987543
Q ss_pred CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecc
Q 007107 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (618)
Q Consensus 481 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfg 560 (618)
...++||||+++ +|.+.+. ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHH------hcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCC
Confidence 357999999975 6777664 2478888999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 172 ~a~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 226 (364)
T cd07875 172 LARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP 226 (364)
T ss_pred CccccCCC--CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCC
Confidence 99765332 12234578999999999999999999999999999999999999995
No 141
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-34 Score=294.89 Aligned_cols=192 Identities=30% Similarity=0.445 Sum_probs=168.4
Q ss_pred eeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCCCh
Q 007107 417 LIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNL 495 (618)
Q Consensus 417 ~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 495 (618)
+||+|.||+||-|++.+ ...+|||.+.... .+..+-+.+|+.+.++++|.|||+++|.+.+++..-+.||-++||+|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekd--sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL 659 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKD--SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL 659 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeeccccc--chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence 69999999999998776 4568999987554 34566789999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCCCCC--CHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeec-CCCCcEEeeccccccCCCCCccc
Q 007107 496 HDMLHFADDSSKNL--TWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD-DELNPHLSDCGLAALTPNTERQV 572 (618)
Q Consensus 496 ~~~l~~~~~~~~~l--~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~-~~~~~kl~Dfgl~~~~~~~~~~~ 572 (618)
.++++. .-+++ .+.++-.+.+||++||.|||++ .|||||||-+||||+ -.|.+||+|||-++....-. ..
T Consensus 660 SsLLrs---kWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin-P~ 732 (1226)
T KOG4279|consen 660 SSLLRS---KWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN-PC 732 (1226)
T ss_pred HHHHHh---ccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCC-cc
Confidence 999973 23455 7888899999999999999999 999999999999997 67899999999998775443 34
Q ss_pred cccccccccccCccccccCC--ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 573 STQMVGAFGYSAPEFALSGI--YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
...+.||..|||||++..+. |+.++|||||||.+.||.||++||-
T Consensus 733 TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ 779 (1226)
T KOG4279|consen 733 TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFV 779 (1226)
T ss_pred ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCee
Confidence 45678999999999998654 8899999999999999999999994
No 142
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=4.7e-33 Score=280.11 Aligned_cols=207 Identities=25% Similarity=0.403 Sum_probs=172.6
Q ss_pred hhhcCCcccceeccCccceEEEEEEc------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH 480 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 480 (618)
...++|+..+.||+|+||.||+|.+. .+..||+|++.... ......++.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 35677999999999999999999753 25679999986433 334556788999999999999999999999999
Q ss_pred CeEEEEEEecCCCChhhhhhcccCC------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCc
Q 007107 481 GQRLLVYEYVGNGNLHDMLHFADDS------SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNP 554 (618)
Q Consensus 481 ~~~~lv~e~~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~ 554 (618)
+..++||||+++++|.++++..+.. ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~ 158 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTV 158 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCE
Confidence 9999999999999999998643221 23467888999999999999999998 99999999999999999999
Q ss_pred EEeeccccccCCCCCccc-cccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 555 HLSDCGLAALTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 555 kl~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
||+|||+++......... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 159 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~ 223 (277)
T cd05062 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 223 (277)
T ss_pred EECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCC
Confidence 999999987553322211 112345778999999998889999999999999999999 788885
No 143
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=4.3e-33 Score=280.70 Aligned_cols=205 Identities=27% Similarity=0.495 Sum_probs=174.0
Q ss_pred hcCCcccceeccCccceEEEEEEcC------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCe
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (618)
..+|...+.||+|+||.||+|...+ ++.||+|.++... ..+..+.+.+|++++++++||||+++++++...+.
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 82 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA-SNDARKDFEREAELLTNFQHENIVKFYGVCTEGDP 82 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC-CHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence 3467788899999999999997643 4789999987543 23345789999999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhccc----------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCC
Q 007107 483 RLLVYEYVGNGNLHDMLHFAD----------DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL 552 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~ 552 (618)
.++||||+++++|.++++... .....+++..+..++.|++.|++|||+. +++||||||+||+++.++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~ 159 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDL 159 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCC
Confidence 999999999999999997432 1234578899999999999999999999 999999999999999999
Q ss_pred CcEEeeccccccCCCCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 553 NPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 553 ~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.+||+|||++........ .......+++.|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 160 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~ 226 (280)
T cd05049 160 VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWY 226 (280)
T ss_pred eEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCC
Confidence 999999999875432221 11223356788999999999999999999999999999998 999985
No 144
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=3.1e-33 Score=291.73 Aligned_cols=198 Identities=23% Similarity=0.306 Sum_probs=169.9
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC------
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH------ 480 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 480 (618)
..++|...+.||+|+||.||++... .++.||+|++............+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4568999999999999999999765 588999999976554555567788999999999999999999988643
Q ss_pred CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecc
Q 007107 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (618)
Q Consensus 481 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfg 560 (618)
...++||||+++ ++.+.++ ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCc
Confidence 357999999975 6666664 2478889999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 165 ~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 219 (355)
T cd07874 165 LARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 219 (355)
T ss_pred ccccCCCc--cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 99765332 22234578999999999999999999999999999999999999995
No 145
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=5.8e-33 Score=280.28 Aligned_cols=204 Identities=29% Similarity=0.537 Sum_probs=173.1
Q ss_pred cCCcccceeccCccceEEEEEEcC------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
++|+..+.||+|+||.||+|.... .+.+++|.+.... .......+.+|++.+++++||||+++++++...+..
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA-EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPT 83 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC-CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCce
Confidence 467888899999999999997643 2579999987543 334456789999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhcccC------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC
Q 007107 484 LLVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~ 551 (618)
+++|||+++++|.+++..... ....+++..+..++.|++.||+|||+. +++||||||+||+++++
T Consensus 84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEG 160 (283)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCC
Confidence 999999999999999864321 114688899999999999999999999 99999999999999999
Q ss_pred CCcEEeeccccccCCCCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 552 LNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 552 ~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
+.+||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||.
T Consensus 161 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~ 228 (283)
T cd05048 161 LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYY 228 (283)
T ss_pred CcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCC
Confidence 9999999999976533222 22233467889999999998899999999999999999998 999985
No 146
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=8.9e-33 Score=276.32 Aligned_cols=202 Identities=30% Similarity=0.474 Sum_probs=173.3
Q ss_pred hcCCcccceeccCccceEEEEEEcC----CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
.++|...+.||+|+||.||+|.+.. ...||+|.++... .......+.+|+..+++++||||+++++++...+..+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM 81 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE
Confidence 3568888999999999999998753 3578999887543 3445567889999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||+++++|.+++.. ..+.+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|||++..
T Consensus 82 iv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~ 155 (266)
T cd05033 82 IITEYMENGSLDKFLRE---NDGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRR 155 (266)
T ss_pred EEEEcCCCCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhc
Confidence 99999999999999863 234789999999999999999999998 999999999999999999999999999987
Q ss_pred CCCCCcc-ccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 565 TPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 565 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
....... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||.
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~ 210 (266)
T cd05033 156 LEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYW 210 (266)
T ss_pred ccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCC
Confidence 6422221 1222345678999999999999999999999999999998 999985
No 147
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=4.3e-33 Score=285.01 Aligned_cols=199 Identities=23% Similarity=0.395 Sum_probs=168.4
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
++|...+.||+|+||.||+|... +++.||+|.++..... .....+.+|++++++++||||+++++++..++..++|||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 84 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE 84 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC-CcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence 56888899999999999999876 5788999998754322 233457789999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+++ +|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 85 ~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 157 (309)
T cd07872 85 YLDK-DLKQYMDD---CGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVP 157 (309)
T ss_pred CCCC-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCC
Confidence 9975 88877752 234578899999999999999999999 9999999999999999999999999998754332
Q ss_pred CccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... .....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||.
T Consensus 158 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~ 206 (309)
T cd07872 158 TKT-YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFP 206 (309)
T ss_pred ccc-cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 221 223467899999999865 468899999999999999999999995
No 148
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=6e-33 Score=276.94 Aligned_cols=200 Identities=32% Similarity=0.524 Sum_probs=171.1
Q ss_pred hcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
..+|...+.||+|+||.||+|.+.++..||+|+++..... ...+.+|++++++++||||+++++++. .+..++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e 80 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTE 80 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccC---HHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEE
Confidence 4568889999999999999998877778999999754332 356889999999999999999999874 456799999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+++|+|.++++.. ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||.++.....
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~ 155 (262)
T cd05071 81 YMSKGSLLDFLKGE--MGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 155 (262)
T ss_pred cCCCCcHHHHHhhc--cccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecccc
Confidence 99999999999632 234578999999999999999999999 9999999999999999999999999999766443
Q ss_pred CccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.........++..|+|||+..+..++.++||||||+++|||+| |+.||.
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~ 205 (262)
T cd05071 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP 205 (262)
T ss_pred ccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Confidence 3322233456778999999998899999999999999999999 888985
No 149
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.7e-33 Score=291.69 Aligned_cols=204 Identities=26% Similarity=0.378 Sum_probs=171.2
Q ss_pred eehhhhhhhhcCCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-C-----Ccccc
Q 007107 400 YTVASLQTATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-H-----PNIVT 472 (618)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~ 472 (618)
|.+..-+....+|++.+.||+|.||+|.+|.. ..++.||||+++... ....+-..|+.++..++ | -|+|+
T Consensus 176 Y~~v~~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k---~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vr 252 (586)
T KOG0667|consen 176 YQLVVNDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK---RFLRQAQIEIRILELLNKHDPDDKYNIVR 252 (586)
T ss_pred eeEEecceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh---HHHHHHHHHHHHHHHHhccCCCCCeeEEE
Confidence 33333344445899999999999999999965 459999999998654 23455567788888776 4 47999
Q ss_pred cceEEeeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC--
Q 007107 473 LAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-- 550 (618)
Q Consensus 473 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~-- 550 (618)
++++|.-.++.+||+|.++. +|.++++..+ -..++...++.|+.||+.||.+||+. +|||+||||+|||+.+
T Consensus 253 m~d~F~fr~HlciVfELL~~-NLYellK~n~--f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~ 326 (586)
T KOG0667|consen 253 MLDYFYFRNHLCIVFELLST-NLYELLKNNK--FRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPK 326 (586)
T ss_pred eeeccccccceeeeehhhhh-hHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCC
Confidence 99999999999999999965 9999998543 45689999999999999999999999 9999999999999974
Q ss_pred CCCcEEeeccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCC
Q 007107 551 ELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 551 ~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf 616 (618)
...+||+|||.|+....... .++-+..|+|||++.+.+|+.+.||||||||++||++|.+-|
T Consensus 327 r~~vKVIDFGSSc~~~q~vy----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLf 388 (586)
T KOG0667|consen 327 RSRIKVIDFGSSCFESQRVY----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLF 388 (586)
T ss_pred cCceeEEecccccccCCcce----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCcccc
Confidence 34799999999987643322 567788999999999999999999999999999999997665
No 150
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.9e-33 Score=278.55 Aligned_cols=199 Identities=34% Similarity=0.562 Sum_probs=174.3
Q ss_pred CcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEec
Q 007107 412 FSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYV 490 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 490 (618)
|+..+.||+|+||.||++.... ++.||+|.+..............+|+..+++++||||+++++++......++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 5677899999999999998875 678999999877655444445566999999999999999999999999999999999
Q ss_pred CCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCc
Q 007107 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570 (618)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~ 570 (618)
++++|.+++. ....+++..+..++.|+++||++||+. +|+|+||||+||++++++.++|+|||.+.... ...
T Consensus 81 ~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-~~~ 152 (260)
T PF00069_consen 81 PGGSLQDYLQ----KNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLS-ENN 152 (260)
T ss_dssp TTEBHHHHHH----HHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEEST-STT
T ss_pred cccccccccc----ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc-ccc
Confidence 9999999996 346789999999999999999999999 99999999999999999999999999987541 122
Q ss_pred cccccccccccccCccccc-cCCccccchhhhHHHHHHHHHhCCCCCCC
Q 007107 571 QVSTQMVGAFGYSAPEFAL-SGIYTVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
.......++..|+|||++. +..++.++||||+|+++|+|++|+.||..
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~ 201 (260)
T PF00069_consen 153 ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEE 201 (260)
T ss_dssp SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 2334467899999999998 88899999999999999999999999863
No 151
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=5.1e-33 Score=288.77 Aligned_cols=197 Identities=23% Similarity=0.386 Sum_probs=168.9
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC------
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH------ 480 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 480 (618)
..++|...+.||+|+||.||+|... +++.||+|++............+.+|++++++++||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 3567999999999999999999764 588999999976544444556678899999999999999999987543
Q ss_pred CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecc
Q 007107 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (618)
Q Consensus 481 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfg 560 (618)
...++++|++ +++|.++++ ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVK-----CQKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred CcEEEEeecC-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCc
Confidence 3568999988 678988774 35689999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 164 ~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 217 (343)
T cd07878 164 LARQADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFP 217 (343)
T ss_pred cceecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCC
Confidence 99765432 234578999999999877 568999999999999999999999985
No 152
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=6.1e-33 Score=277.04 Aligned_cols=201 Identities=26% Similarity=0.466 Sum_probs=172.3
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
..+|...+.||+|++|.||+|... .++.||+|.+.... .....+.+|++.+++++||||+++++++...+..++||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 81 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc---hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEE
Confidence 345778889999999999999765 48899999987542 23567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++++|.+++... ....+++..+..++.|+++||+|||++ +++||||||+||++++++.+||+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~ 156 (263)
T cd05052 82 EFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 156 (263)
T ss_pred EeCCCCcHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccccccc
Confidence 999999999998632 234689999999999999999999998 999999999999999999999999999976644
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
..........++..|+|||.+.+..++.++|||||||++|||++ |..||.
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~ 207 (263)
T cd05052 157 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP 207 (263)
T ss_pred ceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Confidence 32222222334668999999999999999999999999999998 999985
No 153
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=9.5e-33 Score=276.06 Aligned_cols=204 Identities=24% Similarity=0.414 Sum_probs=177.9
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
++|+..+.||+|++|.||+|... +|+.||+|.++.... .....+.+.+|++++++++|+||+++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57888899999999999999877 789999998864332 3334678899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++++|.+++.........+++..+..++.|++.||+|||+. +|+||||+|+||++++++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 99999999999875444456689999999999999999999999 999999999999999999999999999876543
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... .....++..|+|||.+.+..++.++|||||||++|+|++|+.||.
T Consensus 159 ~~~~-~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 207 (267)
T cd08224 159 KTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY 207 (267)
T ss_pred CCcc-cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcc
Confidence 2221 223468889999999998889999999999999999999999984
No 154
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=291.47 Aligned_cols=196 Identities=33% Similarity=0.496 Sum_probs=172.0
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
...|...+.||.|+||.||-|+.. +.++||||++..... +.+.+.+++.|+..+++++|||++.+.|.|-.+...|||
T Consensus 25 Eklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLV 104 (948)
T KOG0577|consen 25 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLV 104 (948)
T ss_pred HHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHH
Confidence 445777788999999999999654 688999999975432 445578999999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
||||- |+-.|++... ..++.+.++..|..+.+.||+|||+. +.||||||+.|||+++.|.||++|||.+....
T Consensus 105 MEYCl-GSAsDlleVh---kKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~ 177 (948)
T KOG0577|consen 105 MEYCL-GSASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMA 177 (948)
T ss_pred HHHHh-ccHHHHHHHH---hccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcC
Confidence 99995 5777877643 46788899999999999999999999 99999999999999999999999999997664
Q ss_pred CCCccccccccccccccCccccc---cCCccccchhhhHHHHHHHHHhCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~Pf 616 (618)
+ ...++|||.|||||++. .+.|+-|+||||||++..||..+++|+
T Consensus 178 P-----AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPl 225 (948)
T KOG0577|consen 178 P-----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 225 (948)
T ss_pred c-----hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCc
Confidence 3 24579999999999985 578999999999999999999999995
No 155
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=5.3e-33 Score=287.32 Aligned_cols=207 Identities=27% Similarity=0.455 Sum_probs=171.4
Q ss_pred hhhcCCcccceeccCccceEEEEEEc------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEee
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAE 479 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 479 (618)
.+.++|++.+.||+|+||.||+|... .++.||+|+++... .....+.+..|++++.++ +|+||+++++++..
T Consensus 4 ~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~ 82 (337)
T cd05054 4 FPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-TASEYKALMTELKILIHIGHHLNVVNLLGACTK 82 (337)
T ss_pred cCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-CHHHHHHHHHHHHHHHhhccCcchhheeeeEec
Confidence 34567899999999999999999642 25789999987543 333456778899999999 89999999998865
Q ss_pred C-CeEEEEEEecCCCChhhhhhcccCC-----------------------------------------------------
Q 007107 480 H-GQRLLVYEYVGNGNLHDMLHFADDS----------------------------------------------------- 505 (618)
Q Consensus 480 ~-~~~~lv~e~~~~gsL~~~l~~~~~~----------------------------------------------------- 505 (618)
. ...+++|||+++++|.+++......
T Consensus 83 ~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (337)
T cd05054 83 PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEG 162 (337)
T ss_pred CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhh
Confidence 4 5688999999999999988532210
Q ss_pred ----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccc-cccccccc
Q 007107 506 ----SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV-STQMVGAF 580 (618)
Q Consensus 506 ----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~-~~~~~gt~ 580 (618)
...+++..+.+++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++......... .....++.
T Consensus 163 ~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd05054 163 DELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL 239 (337)
T ss_pred hHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCc
Confidence 13678999999999999999999999 99999999999999999999999999997654332222 22345677
Q ss_pred cccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 581 GYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 581 ~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 240 ~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~ 277 (337)
T cd05054 240 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYP 277 (337)
T ss_pred cccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCC
Confidence 8999999999999999999999999999998 999985
No 156
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=7.5e-33 Score=275.87 Aligned_cols=201 Identities=28% Similarity=0.505 Sum_probs=173.3
Q ss_pred hhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
..++|+..+.||+|+||.||+|...+++.||+|.+...... ..++.+|+.++++++|+||+++++++. .+..+++|
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMS---PEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIIT 79 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCc---HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEE
Confidence 35678889999999999999999888999999998754433 457889999999999999999999874 45789999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+.+++|.++++.. ....+++.++..++.|++.||+|||+. +++||||||+||++++++.++|+|||++.....
T Consensus 80 e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05067 80 EYMENGSLVDFLKTP--EGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIED 154 (260)
T ss_pred EcCCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCC
Confidence 999999999988632 345689999999999999999999998 999999999999999999999999999976653
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
..........++..|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 155 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 205 (260)
T cd05067 155 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYP 205 (260)
T ss_pred CCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCC
Confidence 32222233456778999999998889999999999999999999 999995
No 157
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=5.6e-33 Score=276.89 Aligned_cols=203 Identities=28% Similarity=0.497 Sum_probs=176.9
Q ss_pred hhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
+...+|+..+.||+|+||.||+|...+++.+++|.+.... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD--LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccc--hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence 4556788899999999999999999889999999987543 22456788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+++++|.++++.. ....+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||.+....
T Consensus 81 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~ 155 (261)
T cd05148 81 TELMEKGSLLAFLRSP--EGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIK 155 (261)
T ss_pred EeecccCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcC
Confidence 9999999999999742 245689999999999999999999998 99999999999999999999999999997664
Q ss_pred CCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
..... .....++..|+|||.+.+..++.++||||||+++|+|++ |+.||.
T Consensus 156 ~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~ 206 (261)
T cd05148 156 EDVYL-SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYP 206 (261)
T ss_pred Ccccc-ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Confidence 32221 223446778999999998889999999999999999998 899985
No 158
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=7.8e-33 Score=275.75 Aligned_cols=200 Identities=33% Similarity=0.531 Sum_probs=171.7
Q ss_pred hcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
.++|+..+.||+|+||.||+|...++..+|+|.+...... .+.+.+|+.++++++|+|++++++++. ....+++||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e 80 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTE 80 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEE
Confidence 4578888999999999999999888889999998764433 356889999999999999999999875 456889999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+++++|.++++.. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 81 YMSKGSLLDFLKDG--EGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDN 155 (260)
T ss_pred ecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCc
Confidence 99999999998632 234689999999999999999999999 9999999999999999999999999999766433
Q ss_pred CccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.........++..|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~ 205 (260)
T cd05070 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYP 205 (260)
T ss_pred ccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCC
Confidence 3222223345678999999988889999999999999999999 999985
No 159
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.4e-32 Score=272.16 Aligned_cols=194 Identities=26% Similarity=0.451 Sum_probs=167.0
Q ss_pred eeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCCChh
Q 007107 417 LIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLH 496 (618)
Q Consensus 417 ~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 496 (618)
+||+|+||.||+|...+++.+|+|.+.... .......+.+|++.+++++||||+++++++...+..++||||+++++|.
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDL-PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 689999999999998889999999987543 3334557889999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccccccc
Q 007107 497 DMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQM 576 (618)
Q Consensus 497 ~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~~~~~ 576 (618)
+++.. ....+++..+..++.|++.||.|+|+. +++||||||+||++++++.+||+|||++..............
T Consensus 81 ~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (250)
T cd05085 81 SFLRK---KKDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLK 154 (250)
T ss_pred HHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCC
Confidence 98853 234578999999999999999999998 999999999999999999999999999875432221111122
Q ss_pred cccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 577 VGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 577 ~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.++..|+|||++.+..++.++||||||+++||+++ |..||.
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~ 196 (250)
T cd05085 155 QIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYP 196 (250)
T ss_pred CCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCC
Confidence 44678999999998899999999999999999998 999985
No 160
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=6.2e-33 Score=280.84 Aligned_cols=199 Identities=28% Similarity=0.408 Sum_probs=162.6
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhc---CCCCcccccceEEeeC-----C
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR---LRHPNIVTLAGYCAEH-----G 481 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~---l~h~niv~l~~~~~~~-----~ 481 (618)
+|+..+.||+|+||.||+|... +|+.||+|.++...........+.+|++.++. ++||||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4778889999999999999776 58899999987543222222334455555544 4799999999988642 4
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccc
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl 561 (618)
..++||||+++ +|.++++.. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKV--PPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred eEEEEEccccc-CHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCc
Confidence 57999999974 888888632 234589999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++...... ......||..|+|||++.+..++.++||||+||++|||++|++||.
T Consensus 155 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~ 208 (288)
T cd07863 155 ARIYSCQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 208 (288)
T ss_pred cccccCcc--cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcC
Confidence 97654322 1233568999999999999999999999999999999999999985
No 161
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.7e-32 Score=276.35 Aligned_cols=192 Identities=25% Similarity=0.425 Sum_probs=168.3
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+|+..+.||+|+||.||+|... +++.||+|.+.... .......+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI-TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC-ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 5777889999999999999764 68899999986542 334456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++++|..+. .+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~ 149 (279)
T cd06619 81 MDGGSLDVYR--------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI 149 (279)
T ss_pred CCCCChHHhh--------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc
Confidence 9999986542 367888899999999999999999 99999999999999999999999999997654322
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.....|+..|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 150 ---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~ 194 (279)
T cd06619 150 ---AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYP 194 (279)
T ss_pred ---ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCch
Confidence 233578999999999999899999999999999999999999985
No 162
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.4e-32 Score=278.54 Aligned_cols=197 Identities=30% Similarity=0.464 Sum_probs=174.3
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
++|+..+.||+|++|.||++... +++.+|+|.++.... .....+.+.+|++++++++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36888899999999999999876 589999999865432 2334567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++++|.++++. ...+++..+..++.|++.||+|||+. +|+||||+|+||++++++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~~~~----~~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 153 (290)
T cd05580 81 EYVPGGELFSHLRK----SGRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG 153 (290)
T ss_pred ecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence 99999999999863 35789999999999999999999998 999999999999999999999999999976644
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||.
T Consensus 154 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 199 (290)
T cd05580 154 R----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFF 199 (290)
T ss_pred C----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 3 223468899999999988888999999999999999999999985
No 163
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=4.7e-34 Score=268.50 Aligned_cols=204 Identities=27% Similarity=0.400 Sum_probs=172.0
Q ss_pred cCCcccceeccCccceEEEEEEcC-----CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee-CCeE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFAN-----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQR 483 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~ 483 (618)
..|+....||+|.||.||+|.-++ .+.+|+|+++.............+|+.+++.++||||+.+..++-. +...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 468888899999999999995432 3479999998764443444566789999999999999999998877 7789
Q ss_pred EEEEEecCCCChhhhhhcccCCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC----CCcEEee
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSS-KNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE----LNPHLSD 558 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~----~~~kl~D 558 (618)
++++||.+. +|...+++.+... ..++...+..|..||+.|+.|||++ =|+||||||.|||+..+ |.|||+|
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEeec
Confidence 999999976 8999998765533 4688899999999999999999999 68999999999999876 8999999
Q ss_pred ccccccCCCCCcc--ccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 559 CGLAALTPNTERQ--VSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 559 fgl~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
||+++.+.+.-.. ....++-|..|+|||.+.+. .||.+.||||+|||+.||+|-++-|.
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~ 241 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFK 241 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCcccc
Confidence 9999988655432 23457889999999999885 48999999999999999999877663
No 164
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.3e-34 Score=292.57 Aligned_cols=195 Identities=25% Similarity=0.412 Sum_probs=167.2
Q ss_pred ccceeccCccceEEEEEEc-CCcEEEEEEcCcccc--cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCe--EEEEEE
Q 007107 414 QEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL--SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ--RLLVYE 488 (618)
Q Consensus 414 ~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--~~lv~e 488 (618)
...+||+|+|-+||+|.+. +|.+||--.++.... +....++|.+|+.+++.++||||++++.++.+... ..+|+|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 3457999999999999765 477777554443332 34455899999999999999999999999987654 789999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeec-CCCCcEEeeccccccCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD-DELNPHLSDCGLAALTPN 567 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~-~~~~~kl~Dfgl~~~~~~ 567 (618)
.+..|+|..|.+. .+.++...+..+++||++||.|||++ .|+|||||||-+||+|+ .-|.|||.|+|+|.....
T Consensus 124 L~TSGtLr~Y~kk----~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 124 LFTSGTLREYRKK----HRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred cccCCcHHHHHHH----hccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 9999999999973 45678889999999999999999997 57999999999999998 669999999999987753
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. ....++|||.|||||++. ..|++.+||||||+.|+||.|+.+||.
T Consensus 199 s---~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYs 244 (632)
T KOG0584|consen 199 S---HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYS 244 (632)
T ss_pred c---ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChh
Confidence 2 233489999999999987 889999999999999999999999985
No 165
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=9.2e-33 Score=283.65 Aligned_cols=194 Identities=25% Similarity=0.445 Sum_probs=159.2
Q ss_pred ceeccCccceEEEEEEc---CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee--CCeEEEEEEec
Q 007107 416 FLIGEGSLGRVYRAEFA---NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE--HGQRLLVYEYV 490 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~ 490 (618)
..||+|+||.||+|... +++.||+|.+..... ...+.+|++++++++||||+++++++.. ....++||||+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA 82 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCCCC----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc
Confidence 47999999999999865 467899999875432 2346789999999999999999998854 45688999998
Q ss_pred CCCChhhhhhcccC-----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeee----cCCCCcEEeeccc
Q 007107 491 GNGNLHDMLHFADD-----SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL----DDELNPHLSDCGL 561 (618)
Q Consensus 491 ~~gsL~~~l~~~~~-----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl----~~~~~~kl~Dfgl 561 (618)
+ ++|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+
T Consensus 83 ~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 83 E-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred C-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 6 488887753221 123588999999999999999999999 99999999999999 4567899999999
Q ss_pred cccCCCCCc--cccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNTER--QVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++....... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~ 217 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCcc
Confidence 986643321 12234578999999999977 458999999999999999999999995
No 166
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=4.4e-33 Score=277.30 Aligned_cols=199 Identities=40% Similarity=0.643 Sum_probs=166.9
Q ss_pred ccceeccCccceEEEEEEc-----CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 414 QEFLIGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 414 ~~~~Lg~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
..+.||+|.||.||+|.+. .+..|+||.++.. ...+..+.+.+|++.+++++||||++++|++...+..++|+|
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e 81 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS-SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME 81 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT-SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc-cccccceeeeeccccccccccccccccccccccccccccccc
Confidence 4568999999999999887 2578999999653 344457889999999999999999999999998888999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+++|+|.++++.. ....+++..+..++.||++||+|||++ +++|+||+++||++++++.+||+|||++......
T Consensus 82 ~~~~g~L~~~L~~~--~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~ 156 (259)
T PF07714_consen 82 YCPGGSLDDYLKSK--NKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK 156 (259)
T ss_dssp --TTEBHHHHHHHT--CTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred cccccccccccccc--ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc
Confidence 99999999999743 246789999999999999999999999 9999999999999999999999999999766322
Q ss_pred Cc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCCC
Q 007107 569 ER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDR 618 (618)
Q Consensus 569 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~~ 618 (618)
.. .......+...|+|||.+....++.++||||||+++|||++ |+.||..
T Consensus 157 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~ 208 (259)
T PF07714_consen 157 SKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSD 208 (259)
T ss_dssp SSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 11 22223457788999999999999999999999999999999 7899863
No 167
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-33 Score=284.79 Aligned_cols=205 Identities=29% Similarity=0.471 Sum_probs=177.9
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEcC---Cc--EEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFAN---GK--IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~---g~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 479 (618)
.+.........++||+|.||.||+|.+.+ |+ .||||.-+... .....+.|+.|..+|+.++||||++++|+|.+
T Consensus 384 yel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~-t~d~tekflqEa~iMrnfdHphIikLIGv~~e 462 (974)
T KOG4257|consen 384 YELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC-TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE 462 (974)
T ss_pred ceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC-ChhhHHHHHHHHHHHHhCCCcchhheeeeeec
Confidence 33444556677789999999999997653 33 47888877544 44557889999999999999999999999975
Q ss_pred CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeec
Q 007107 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (618)
Q Consensus 480 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Df 559 (618)
. ..|+|||.++.|.|..+++. +...++......++.||+.||+|||+. ++|||||..+|||+....-||++||
T Consensus 463 ~-P~WivmEL~~~GELr~yLq~---nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDF 535 (974)
T KOG4257|consen 463 Q-PMWIVMELAPLGELREYLQQ---NKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADF 535 (974)
T ss_pred c-ceeEEEecccchhHHHHHHh---ccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeeccc
Confidence 4 78999999999999999974 455788899999999999999999999 9999999999999999989999999
Q ss_pred cccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 560 GLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 560 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
|+++.+.++..+......-+..|||||.+.-++++.++|||-|||.|||++. |..||.
T Consensus 536 GLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfq 594 (974)
T KOG4257|consen 536 GLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQ 594 (974)
T ss_pred chhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccc
Confidence 9999987766655555566779999999999999999999999999999887 999996
No 168
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8e-33 Score=292.11 Aligned_cols=194 Identities=22% Similarity=0.285 Sum_probs=167.9
Q ss_pred hcCCcccceeccCccceEEEEEEc---CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA---NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
..+|...+.||+|+||.||++... .++.|++|.+... ....+|++++++++||||+++++++......++
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l 163 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRWKSTVCM 163 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEE
Confidence 457999999999999999999654 3578999988643 234578999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
|||++. ++|.+++. ....+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 164 v~e~~~-~~l~~~l~----~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~ 235 (392)
T PHA03207 164 VMPKYK-CDLFTYVD----RSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKL 235 (392)
T ss_pred EehhcC-CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCcccccc
Confidence 999996 58888874 346789999999999999999999999 9999999999999999999999999999765
Q ss_pred CCCCcc-ccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
...... ......||+.|+|||++.+..|+.++|||||||++|||++|+.||.
T Consensus 236 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~ 288 (392)
T PHA03207 236 DAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLF 288 (392)
T ss_pred CcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 433221 2234579999999999999999999999999999999999999984
No 169
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.6e-32 Score=277.14 Aligned_cols=204 Identities=26% Similarity=0.512 Sum_probs=171.5
Q ss_pred cCCcccceeccCccceEEEEEE-----cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEF-----ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
.+|+..+.||+|+||.||+|.. .+++.+++|.++... ..+....+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence 4577788999999999999974 246789999997543 3344567889999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC
Q 007107 485 LVYEYVGNGNLHDMLHFADD-------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~ 551 (618)
+||||+++++|.+++..... ....+++..+..++.|++.||+|||++ +|+||||||+|||++++
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~ 160 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQ 160 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCC
Confidence 99999999999998853211 123578889999999999999999999 99999999999999999
Q ss_pred CCcEEeeccccccCCCCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 552 LNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 552 ~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
+.+||+|||++........ .......++..|+|||++.+..++.++||||||+++|||++ |..||.
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~ 228 (283)
T cd05090 161 LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYY 228 (283)
T ss_pred CcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence 9999999999976533221 12233456778999999998889999999999999999998 999984
No 170
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.9e-32 Score=271.64 Aligned_cols=195 Identities=25% Similarity=0.431 Sum_probs=165.6
Q ss_pred ceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCCC
Q 007107 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGN 494 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 494 (618)
+.||+|+||.||+|... +++.+|+|.+.... ..+....+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence 36999999999999775 68999999886443 33455678999999999999999999999999999999999999999
Q ss_pred hhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccc-c
Q 007107 495 LHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV-S 573 (618)
Q Consensus 495 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~-~ 573 (618)
|.++++. ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......... .
T Consensus 80 L~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 153 (252)
T cd05084 80 FLTFLRT---EGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG 153 (252)
T ss_pred HHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccC
Confidence 9999862 234688999999999999999999999 99999999999999999999999999987543221111 1
Q ss_pred ccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 574 TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 574 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
....++..|+|||.+.+..++.++||||||+++|||++ |..||+
T Consensus 154 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~ 198 (252)
T cd05084 154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYA 198 (252)
T ss_pred CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence 11123457999999999999999999999999999998 999985
No 171
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.9e-32 Score=272.55 Aligned_cols=193 Identities=30% Similarity=0.446 Sum_probs=165.0
Q ss_pred eeccCccceEEEEEEc---CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCC
Q 007107 417 LIGEGSLGRVYRAEFA---NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (618)
Q Consensus 417 ~Lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 493 (618)
.||+|+||.||+|.+. +++.+|+|+++.........+.+.+|+.+++.++||||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 5899999999999653 5788999998765555556678999999999999999999999875 45678999999999
Q ss_pred ChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccc-
Q 007107 494 NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV- 572 (618)
Q Consensus 494 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~- 572 (618)
+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.........
T Consensus 81 ~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 81 PLNKFLQK----NKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 99999862 34689999999999999999999998 99999999999999999999999999997664333221
Q ss_pred -cccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 573 -STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 573 -~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.....++..|+|||.+....++.++|||||||++|||++ |+.||+
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~ 200 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYK 200 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 112234578999999988889999999999999999998 999996
No 172
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.8e-32 Score=277.56 Aligned_cols=204 Identities=27% Similarity=0.477 Sum_probs=172.2
Q ss_pred hcCCcccceeccCccceEEEEEEc------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCe
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (618)
..+|...+.||+|+||.||++... ++..+|+|.+.... ......+.+|++++++++||||+++++++...+.
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 81 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 456888889999999999999742 34568999886542 3345678999999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhccc---------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCC
Q 007107 483 RLLVYEYVGNGNLHDMLHFAD---------DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN 553 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~ 553 (618)
.++||||+++++|.++++... .....+++..+..++.|++.||+|||+. +++||||||+||++++++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLL 158 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 999999999999999986432 1223589999999999999999999998 9999999999999999999
Q ss_pred cEEeeccccccCCCCCcc-ccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 554 PHLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 554 ~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
+||+|||+++........ ......++..|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 159 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~ 224 (288)
T cd05093 159 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWY 224 (288)
T ss_pred EEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999999999765432221 1122345778999999999899999999999999999998 999985
No 173
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.5e-32 Score=273.78 Aligned_cols=202 Identities=32% Similarity=0.527 Sum_probs=175.0
Q ss_pred hhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
..++|...+.||+|+||.||+|...+++.+|+|.+...... .+++.+|++.+++++|+||+++++++......++||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMS---PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccC---HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEE
Confidence 45678889999999999999999888889999998754433 456889999999999999999999999889999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++++|.++++.. ....+++..+..++.|++.|++|||++ +++|+||||+||++++++.+||+|||.+.....
T Consensus 81 e~~~~~~L~~~i~~~--~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 81 EYMSKGSLLDFLKSG--EGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIED 155 (261)
T ss_pred eccCCCCHHHHHhcc--ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccc
Confidence 999999999998632 234689999999999999999999999 999999999999999999999999999876643
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
..........++..|+|||.+.+..++.++||||+|+++|||++ |+.||.
T Consensus 156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 206 (261)
T cd05034 156 DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYP 206 (261)
T ss_pred hhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 22222222335568999999998889999999999999999999 999985
No 174
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2e-32 Score=295.73 Aligned_cols=198 Identities=23% Similarity=0.355 Sum_probs=159.9
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC------CCCcccccceEE
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL------RHPNIVTLAGYC 477 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~ 477 (618)
+....++|...+.||+|+||.||+|... .++.||||+++... .....+..|+++++.+ .|.+++++++++
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 3445678999999999999999999765 47889999986422 1223344455555444 455688888888
Q ss_pred eeC-CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCceecCCCCCCeeecCCC---
Q 007107 478 AEH-GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE-VCLPSVVHRNFKSANILLDDEL--- 552 (618)
Q Consensus 478 ~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~Dlkp~NiLl~~~~--- 552 (618)
... +..++|||++ +++|.+++. ..+.+++..+..++.||+.||+|||+ . +||||||||+|||++.++
T Consensus 201 ~~~~~~~~iv~~~~-g~~l~~~l~----~~~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~ 272 (467)
T PTZ00284 201 QNETGHMCIVMPKY-GPCLLDWIM----KHGPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVV 272 (467)
T ss_pred EcCCceEEEEEecc-CCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCccc
Confidence 765 5788999988 668888875 23578999999999999999999997 5 899999999999998765
Q ss_pred -------------CcEEeeccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 553 -------------NPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 553 -------------~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.+||+|||.+.... ......+||+.|+|||++.+..|+.++|||||||++|||++|+.||+
T Consensus 273 ~~~~~~~~~~~~~~vkl~DfG~~~~~~----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~ 346 (467)
T PTZ00284 273 DPVTNRALPPDPCRVRICDLGGCCDER----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYD 346 (467)
T ss_pred ccccccccCCCCceEEECCCCccccCc----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 49999999875432 22234689999999999999999999999999999999999999996
No 175
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.4e-32 Score=274.92 Aligned_cols=204 Identities=25% Similarity=0.403 Sum_probs=176.5
Q ss_pred cCCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.+|+..+.||+|++|.||+|.. .+++.+++|.+..... ......++.+|+++++.++||||+++++++...+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 3577888999999999999986 4789999998865332 3334567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++++|.++++........+++..++.++.|++.||+|||++ +++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999998875444456789999999999999999999999 999999999999999999999999999876543
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||.
T Consensus 159 ~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 207 (267)
T cd08229 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY 207 (267)
T ss_pred CCc-ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcc
Confidence 322 1233568899999999998889999999999999999999999984
No 176
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2.1e-32 Score=274.49 Aligned_cols=203 Identities=25% Similarity=0.465 Sum_probs=169.9
Q ss_pred CcccceeccCccceEEEEEEcC----CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCe-----
Q 007107 412 FSQEFLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ----- 482 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 482 (618)
|...+.||+|+||.||+|.... +..||+|+++...........+.+|++.++.++||||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4566789999999999997653 3679999998665555566789999999999999999999998866554
Q ss_pred -EEEEEEecCCCChhhhhhccc--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeec
Q 007107 483 -RLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (618)
Q Consensus 483 -~~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Df 559 (618)
.++++||+++|+|.+++...+ .....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 789999999999999885432 1234689999999999999999999998 9999999999999999999999999
Q ss_pred cccccCCCCCccc-cccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 560 GLAALTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 560 gl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
|+++......... .....++..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~ 217 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYP 217 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 9997654332221 112235678999999988889999999999999999999 999985
No 177
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.9e-32 Score=276.01 Aligned_cols=200 Identities=28% Similarity=0.420 Sum_probs=166.9
Q ss_pred cCCcccceeccCccceEEEEEEc-CCc----EEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
.+|+..+.||+|+||.||+|.+. +++ .+++|.+.... ......++..|+..++++.||||+++++++.. ...+
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~ 84 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS-GRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQ 84 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc-chHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccE
Confidence 46777889999999999999864 344 47778775432 23344677888888999999999999998754 4678
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+++||+++|+|.++++. ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.
T Consensus 85 ~i~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~ 158 (279)
T cd05111 85 LVTQLSPLGSLLDHVRQ---HRDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADL 158 (279)
T ss_pred EEEEeCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCcccee
Confidence 89999999999999963 235689999999999999999999998 999999999999999999999999999976
Q ss_pred CCCCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 565 TPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 565 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
...... .......++..|+|||.+.+..++.++||||||+++|||++ |+.||.
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~ 213 (279)
T cd05111 159 LYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYA 213 (279)
T ss_pred ccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCC
Confidence 543322 12233457788999999999999999999999999999998 999985
No 178
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.7e-32 Score=277.27 Aligned_cols=200 Identities=27% Similarity=0.416 Sum_probs=171.9
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
++|+..+.||+|++|.||+|... +|+.||+|++..........+.+.+|++++++++||||+++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 36788889999999999999876 58999999987544333334567899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|++++.|..+.. ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||++......
T Consensus 81 ~~~~~~l~~~~~----~~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 81 YCDHTVLNELEK----NPRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred ccCccHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 999988887764 334689999999999999999999998 9999999999999999999999999999766543
Q ss_pred CccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. ......++..|+|||++.+ ..++.++||||||+++|||++|+.||.
T Consensus 154 ~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~ 202 (286)
T cd07847 154 GD-DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWP 202 (286)
T ss_pred cc-cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCC
Confidence 32 1223467889999999876 457899999999999999999999985
No 179
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2.7e-32 Score=278.95 Aligned_cols=198 Identities=26% Similarity=0.417 Sum_probs=172.5
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
++|+..+.||+|+||.||++.+. ++..+|+|.++... ......++.+|++++++++||||+++++.+..++..++|||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME 79 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence 36888899999999999999765 57888999886432 33445678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+++++|.++++. ...+++..+..++.|+++||+|||+.+ +++||||||+||++++++.+||+|||++......
T Consensus 80 y~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (308)
T cd06615 80 HMDGGSLDQVLKK----AGRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 153 (308)
T ss_pred ccCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccccc
Confidence 9999999999963 356889999999999999999999742 8999999999999999999999999998655322
Q ss_pred CccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
......|+..|+|||.+.+..++.++||||||+++|||++|+.||.
T Consensus 154 ---~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~ 199 (308)
T cd06615 154 ---MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIP 199 (308)
T ss_pred ---ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCC
Confidence 1234578899999999988889999999999999999999999985
No 180
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.7e-32 Score=277.09 Aligned_cols=201 Identities=26% Similarity=0.401 Sum_probs=170.1
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+|+..+.||+|++|.||+|... +++.||+|+++...........+.+|+.++++++||||+++++++..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4777889999999999999875 589999999875443333346678899999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
++ ++|.++++... ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 81 LS-MDLKKYLDSLP-KGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred CC-CCHHHHHhcCC-CCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 97 68888886432 235689999999999999999999999 99999999999999999999999999987553322
Q ss_pred ccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. ......+++.|+|||++.+. .++.++|||||||++|||+||+.||.
T Consensus 156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~ 203 (285)
T cd07861 156 R-VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFH 203 (285)
T ss_pred c-cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 1 22234678899999988654 47889999999999999999999995
No 181
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-33 Score=250.36 Aligned_cols=207 Identities=26% Similarity=0.394 Sum_probs=175.1
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhh-cCCCCcccccceEEeeCCe
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMS-RLRHPNIVTLAGYCAEHGQ 482 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~-~l~h~niv~l~~~~~~~~~ 482 (618)
++...++......||+|++|.|-+.++. +|..+|+|++.... ..++.++++.|+.+.. ...+|.+|.++|.....+.
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv-n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd 119 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV-NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD 119 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc-ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc
Confidence 5566677777888999999999888765 69999999997654 3556677778887654 4579999999999999999
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccc
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~ 562 (618)
.++.||.|.. +|..+.+..-..++.+++..+-+|+..+.+||+|||++. .+||||+||+|||++.+|++||+|||.+
T Consensus 120 vwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIs 196 (282)
T KOG0984|consen 120 VWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGIS 196 (282)
T ss_pred EEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccc
Confidence 9999999964 888888766667888999999999999999999999985 8999999999999999999999999999
Q ss_pred ccCCCCCccccccccccccccCcccccc----CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 563 ALTPNTERQVSTQMVGAFGYSAPEFALS----GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
....+. ...+...|-..|||||.+.. ..|+-|+||||||+.+.||.+++.|++
T Consensus 197 G~L~dS--iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~ 253 (282)
T KOG0984|consen 197 GYLVDS--IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYE 253 (282)
T ss_pred eeehhh--hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccc
Confidence 765422 11122467788999999853 368999999999999999999999986
No 182
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=3.1e-32 Score=270.69 Aligned_cols=201 Identities=24% Similarity=0.401 Sum_probs=176.9
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+|+..+.||+|+||.||.++.. +++.+++|++.....+....+++.+|++++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 4778889999999999999754 588999999876655556677889999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++++|.+++... ....+++.++..++.|++.|++|||+. +++||||+|+||++++++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 81 ANGGTLYDKIVRQ--KGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred cCCCcHHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 9999999998632 245689999999999999999999998 99999999999999999999999999997664333
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. ......|++.|+|||.+.+..++.++||||||+++|||++|+.||+
T Consensus 156 ~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~ 202 (256)
T cd08221 156 S-MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFD 202 (256)
T ss_pred c-cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCC
Confidence 2 2334578999999999998889999999999999999999999986
No 183
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.3e-32 Score=273.38 Aligned_cols=199 Identities=29% Similarity=0.412 Sum_probs=170.7
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
..+|+..+.||+|+||.||+|... +++.||+|++..... .....+.+|+.++++++||||+++++++...+..++||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~ 85 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG--DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM 85 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc--chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence 457888999999999999999864 688999999864432 23456788999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++++|.++++ ....+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 86 e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06646 86 EYCGGGSLQDIYH----VTGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITA 158 (267)
T ss_pred eCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeecc
Confidence 9999999999886 235688999999999999999999998 999999999999999999999999999976543
Q ss_pred CCccccccccccccccCccccc---cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. .......|++.|+|||.+. ...++.++|||||||++|||++|+.||.
T Consensus 159 ~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~ 210 (267)
T cd06646 159 TI-AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMF 210 (267)
T ss_pred cc-cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCcc
Confidence 22 1123356889999999985 3447889999999999999999999984
No 184
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2e-32 Score=275.91 Aligned_cols=206 Identities=25% Similarity=0.409 Sum_probs=174.7
Q ss_pred hhcCCcccceeccCccceEEEEEEcC-----CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee-CC
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE-HG 481 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~ 481 (618)
..++|...+.||+|+||.||+|.+.+ +..|++|++.... .......+.+|+.++++++||||+++++++.. ..
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA-SEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE 82 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 35678888999999999999998766 7889999887443 44456778899999999999999999998766 46
Q ss_pred eEEEEEEecCCCChhhhhhcccCC----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEe
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDS----SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLS 557 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~ 557 (618)
..++++||+++++|.+++...... ...+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~ 159 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKIT 159 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEEC
Confidence 789999999999999998654322 15689999999999999999999998 99999999999999999999999
Q ss_pred eccccccCCCCCcc-ccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 558 DCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 558 Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
|||+++.+...... ......++..|+|||++.+..++.++||||||+++||+++ |+.||.
T Consensus 160 d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 221 (280)
T cd05043 160 DNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYV 221 (280)
T ss_pred CCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcC
Confidence 99999765433222 1222346778999999998889999999999999999999 999996
No 185
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2.8e-32 Score=276.47 Aligned_cols=204 Identities=26% Similarity=0.480 Sum_probs=172.4
Q ss_pred hcCCcccceeccCccceEEEEEEc------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCe
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (618)
..+|...+.||+|+||.||+|... ++..+++|.+.... ....+.+.+|++.+++++||||+++++++...+.
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT--LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDP 81 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc--HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCc
Confidence 345777889999999999999743 35668899886443 3345678899999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhcccC------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC
Q 007107 483 RLLVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD 550 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~ 550 (618)
.++||||+++++|.++++.... ....+++..++.++.|++.|++|||++ +|+||||||+||++++
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~ 158 (291)
T cd05094 82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGA 158 (291)
T ss_pred eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEcc
Confidence 9999999999999999864321 234589999999999999999999999 9999999999999999
Q ss_pred CCCcEEeeccccccCCCCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 551 ELNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 551 ~~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
++.+||+|||++........ .......++..|+|||++.+..++.++||||||+++|||+| |+.||.
T Consensus 159 ~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 227 (291)
T cd05094 159 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWF 227 (291)
T ss_pred CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999975543221 11223456788999999999999999999999999999999 999985
No 186
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2.5e-32 Score=272.13 Aligned_cols=199 Identities=31% Similarity=0.541 Sum_probs=169.6
Q ss_pred cCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
++|...+.||+|++|.||+|...++..+|+|++..... ..+.+.+|++++++++|||++++++++. .+..++||||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEF 81 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEc
Confidence 46788889999999999999988877899998865432 2456888999999999999999998875 4568899999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++++|.++++.. ....+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||.+.......
T Consensus 82 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 82 MGKGSLLDFLKEG--DGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred CCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 9999999999632 234578999999999999999999999 99999999999999999999999999997654332
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
........++..|+|||...+..++.++||||||+++|||+| |+.||.
T Consensus 157 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~ 205 (260)
T cd05069 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYP 205 (260)
T ss_pred ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCC
Confidence 222223346778999999998899999999999999999999 999985
No 187
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2.8e-32 Score=277.38 Aligned_cols=202 Identities=31% Similarity=0.484 Sum_probs=167.6
Q ss_pred cCCcccceeccCccceEEEEEEcC-Cc--EEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFAN-GK--IMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~-g~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 485 (618)
++|+..+.||+|+||.||+|...+ +. .+++|.++... .....+.+.+|++++.++ +||||+++++++...+..++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA-SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC-CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 578888999999999999998754 33 46888876422 334456788999999998 79999999999999999999
Q ss_pred EEEecCCCChhhhhhcccC------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCC
Q 007107 486 VYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN 553 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~ 553 (618)
|+||+++++|.++++.... ....+++..+..++.|++.||+|||+. +|+||||||+|||+++++.
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~ 157 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLA 157 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCe
Confidence 9999999999999964321 123588999999999999999999998 9999999999999999999
Q ss_pred cEEeeccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 554 PHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 554 ~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
+||+|||++........ ......+..|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 158 ~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~ 220 (297)
T cd05089 158 SKIADFGLSRGEEVYVK--KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYC 220 (297)
T ss_pred EEECCcCCCccccceec--cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Confidence 99999999864321111 111223557999999998889999999999999999998 999985
No 188
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.3e-32 Score=281.85 Aligned_cols=198 Identities=24% Similarity=0.338 Sum_probs=165.7
Q ss_pred cceeccC--ccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecC
Q 007107 415 EFLIGEG--SLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVG 491 (618)
Q Consensus 415 ~~~Lg~G--~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 491 (618)
.++||+| +|++||++... +|+.||+|++............+.+|+++++.++||||+++++++..++..++||||++
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence 4579999 67899999765 68999999997655444455678889999999999999999999999999999999999
Q ss_pred CCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCc-
Q 007107 492 NGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER- 570 (618)
Q Consensus 492 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~- 570 (618)
+|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+..........
T Consensus 83 ~~~l~~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 83 YGSAKDLICTH--FMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred CCcHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence 99999998632 234589999999999999999999998 999999999999999999999999986543221111
Q ss_pred -----cccccccccccccCcccccc--CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 571 -----QVSTQMVGAFGYSAPEFALS--GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 571 -----~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.......++..|+|||++.+ ..++.++|||||||++|||++|+.||+
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 211 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 211 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 01122356778999999976 458999999999999999999999996
No 189
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.6e-32 Score=292.18 Aligned_cols=193 Identities=23% Similarity=0.304 Sum_probs=165.7
Q ss_pred hcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
...|...+.||+|+||.||+|.+.. ++.||+|... ...+.+|++++++++|+||+++++++...+..++||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~--------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~ 239 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW--------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVL 239 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc--------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 4578999999999999999998764 7889999643 123568999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
|++. ++|.+++.. ....+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 240 e~~~-~~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~ 312 (461)
T PHA03211 240 PKYR-SDLYTYLGA---RLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARG 312 (461)
T ss_pred EccC-CCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccc
Confidence 9995 688887752 234689999999999999999999999 999999999999999999999999999976543
Q ss_pred CCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCC
Q 007107 568 TER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 568 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf 616 (618)
... .......||+.|+|||++.+..++.++|||||||++|||++|..|+
T Consensus 313 ~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l 362 (461)
T PHA03211 313 SWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL 362 (461)
T ss_pred ccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence 221 1223457999999999999999999999999999999999987653
No 190
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=2.5e-32 Score=272.92 Aligned_cols=200 Identities=27% Similarity=0.410 Sum_probs=172.6
Q ss_pred CCcccceeccCccceEEEEEEcCCcEEEEEEcCcccc----cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAAL----SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
+|...+.||+|+||.||+|...+|+.+|+|.+..... .......+.+|++.+++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4677889999999999999888899999998864432 122345688999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
+||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+|+||+|+||++++++.+||+|||++....
T Consensus 81 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 153 (265)
T cd06631 81 MEFVPGGSISSILNR----FGPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLA 153 (265)
T ss_pred EecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhh
Confidence 999999999999862 34678999999999999999999998 99999999999999999999999999987542
Q ss_pred CCC-----ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTE-----RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... ........|+..|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~ 209 (265)
T cd06631 154 WVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLA 209 (265)
T ss_pred hccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccc
Confidence 111 111223568899999999999889999999999999999999999995
No 191
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=3.1e-32 Score=273.24 Aligned_cols=202 Identities=28% Similarity=0.477 Sum_probs=167.6
Q ss_pred cccceeccCccceEEEEEEcCC-c--EEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC------CeE
Q 007107 413 SQEFLIGEGSLGRVYRAEFANG-K--IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH------GQR 483 (618)
Q Consensus 413 ~~~~~Lg~G~~g~Vy~~~~~~g-~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~ 483 (618)
...+.||+|+||.||+|.+.+. . .+|+|.++.........+.+.+|++.++.++||||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 4567899999999999987653 2 589999876655555677889999999999999999999987432 246
Q ss_pred EEEEEecCCCChhhhhhccc--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccc
Q 007107 484 LLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl 561 (618)
+++|||+++|+|.+++...+ .....+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCc
Confidence 89999999999998874322 2234589999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCCccc-cccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 562 AALTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
++......... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 216 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYP 216 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCC
Confidence 98664332211 122346778999999999999999999999999999999 899985
No 192
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=2.3e-32 Score=276.38 Aligned_cols=212 Identities=26% Similarity=0.370 Sum_probs=176.0
Q ss_pred eeehhhhhhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceE
Q 007107 399 SYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGY 476 (618)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~ 476 (618)
...+..+..+.++|+..+.||+|+||.||+|... +++.+|+|.+.... .....+.+|+.+++.+ +||||++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 83 (286)
T cd06638 7 TIIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH---DIDEEIEAEYNILKALSDHPNVVKFYGM 83 (286)
T ss_pred eEEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc---chHHHHHHHHHHHHHHhcCCCeeeeeee
Confidence 3555667778899999999999999999999775 57899999876432 1235677888989888 69999999998
Q ss_pred Ee-----eCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC
Q 007107 477 CA-----EHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (618)
Q Consensus 477 ~~-----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~ 551 (618)
+. ..+..++||||+++++|.++++........+++..+..++.|++.||.|||+. +|+||||||+||+++++
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~ 160 (286)
T cd06638 84 YYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTE 160 (286)
T ss_pred eeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCC
Confidence 74 34568999999999999998764333446788999999999999999999998 99999999999999999
Q ss_pred CCcEEeeccccccCCCCCccccccccccccccCcccccc-----CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 552 LNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALS-----GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 552 ~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+.+||+|||++....... .......|++.|+|||++.. ..++.++||||+||++|||++|+.||.
T Consensus 161 ~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~ 230 (286)
T cd06638 161 GGVKLVDFGVSAQLTSTR-LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLA 230 (286)
T ss_pred CCEEEccCCceeecccCC-CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCC
Confidence 999999999987654322 12223468999999999853 447889999999999999999999985
No 193
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-33 Score=284.30 Aligned_cols=205 Identities=25% Similarity=0.460 Sum_probs=178.9
Q ss_pred hhhhhhcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCe
Q 007107 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (618)
Q Consensus 404 ~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (618)
.++-...+....++||-|.||.||.|.|+. .-.||||.++.. ..+..+|+.|+.+|+.++|||+|+++|+|..+..
T Consensus 261 kWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED---tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpP 337 (1157)
T KOG4278|consen 261 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP 337 (1157)
T ss_pred hhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc---chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCC
Confidence 344445566777899999999999999875 567999999754 3457889999999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccc
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~ 562 (618)
.|||+|||.+|+|.++++.+. ...++.-..+.++.||..|++||..+ ++|||||..+|+|+.++..|||+|||++
T Consensus 338 FYIiTEfM~yGNLLdYLRecn--r~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLs 412 (1157)
T KOG4278|consen 338 FYIITEFMCYGNLLDYLRECN--RSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLS 412 (1157)
T ss_pred eEEEEecccCccHHHHHHHhc--hhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchh
Confidence 999999999999999998653 45677777889999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCC
Q 007107 563 ALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPL 616 (618)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf 616 (618)
+.+..+......+.--.+.|.|||.+....++.|+|||+|||+|||+.| |-.||
T Consensus 413 RlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPY 467 (1157)
T KOG4278|consen 413 RLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPY 467 (1157)
T ss_pred hhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCC
Confidence 9987654443334455678999999999999999999999999999998 77775
No 194
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.5e-32 Score=277.45 Aligned_cols=199 Identities=27% Similarity=0.431 Sum_probs=173.6
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
...+|+..+.||+|++|.||+|... +++.+++|.+...... ....+.+|+.+++.++|+||+++++.+......++|
T Consensus 18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv 95 (296)
T cd06654 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (296)
T ss_pred cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence 3467888899999999999999764 5889999988754422 356688999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+++++|.++++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 96 ~e~~~~~~L~~~~~-----~~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~ 167 (296)
T cd06654 96 MEYLAGGSLTDVVT-----ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (296)
T ss_pred ecccCCCCHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcc
Confidence 99999999999885 24578899999999999999999999 99999999999999999999999999987654
Q ss_pred CCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... ......|++.|+|||.+.+..++.++|||||||++|||++|+.||.
T Consensus 168 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~ 217 (296)
T cd06654 168 PEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL 217 (296)
T ss_pred cccc-ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCC
Confidence 3221 1223468899999999998889999999999999999999999985
No 195
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-33 Score=263.45 Aligned_cols=194 Identities=26% Similarity=0.407 Sum_probs=164.3
Q ss_pred cceeccCccceEEEEE-EcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEEEEEecCC
Q 007107 415 EFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (618)
Q Consensus 415 ~~~Lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 492 (618)
.+.||+|+|+.|--+. ..+|.+||||++.+.. .....+..+|++++.+. .|+||+++++||+++...|||||-|.|
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~--gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~G 160 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP--GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRG 160 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcCC--chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccC
Confidence 3479999999999884 5679999999998763 33567788999999888 599999999999999999999999999
Q ss_pred CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCC---cEEeeccccccCCCCC
Q 007107 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN---PHLSDCGLAALTPNTE 569 (618)
Q Consensus 493 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~---~kl~Dfgl~~~~~~~~ 569 (618)
|+|.+.++ ....+++.++.++.++|+.||.|||.+ ||.||||||+|||-....+ +||+||.++.-.....
T Consensus 161 GplLshI~----~~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~ 233 (463)
T KOG0607|consen 161 GPLLSHIQ----KRKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNN 233 (463)
T ss_pred chHHHHHH----HhhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeeccccccccccCC
Confidence 99999997 456789999999999999999999999 9999999999999975544 7999998875432111
Q ss_pred cc--c----cccccccccccCccccc-----cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQ--V----STQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~--~----~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+. . -...+|+..|||||++. ...|+.+.|.||||||+|-|+.|.+||.
T Consensus 234 ~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFv 292 (463)
T KOG0607|consen 234 DCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFV 292 (463)
T ss_pred CCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCcc
Confidence 11 1 12357899999999874 3458899999999999999999999995
No 196
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2e-32 Score=279.20 Aligned_cols=203 Identities=29% Similarity=0.476 Sum_probs=168.7
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCc--EEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGK--IMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 484 (618)
.++|+..+.||+|+||.||+|.+. ++. .+++|.++... .......+.+|++++.++ +||||+++++++...+..+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC-CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 457888899999999999999875 344 45777765432 334567788999999999 8999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccC------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCC
Q 007107 485 LVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL 552 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~ 552 (618)
+||||+++++|.++++.... ....+++.+++.++.|++.|++|||++ +|+||||||+|||+++++
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~ 161 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENY 161 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCC
Confidence 99999999999999974321 123578999999999999999999999 999999999999999999
Q ss_pred CcEEeeccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 553 NPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 553 ~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.+||+|||++....... ......++..|+|||++.+..++.++|||||||++|||+| |..||.
T Consensus 162 ~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 225 (303)
T cd05088 162 VAKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 225 (303)
T ss_pred cEEeCccccCcccchhh--hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcc
Confidence 99999999986332111 1111234668999999988889999999999999999998 999985
No 197
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.8e-32 Score=271.01 Aligned_cols=199 Identities=29% Similarity=0.523 Sum_probs=171.9
Q ss_pred cCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
.+|+..+.||+|+||.||+|.+.+++.+|+|.+...... ...+.+|++++++++|||++++++++......++||||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEF 80 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEc
Confidence 467778899999999999998877889999998754433 35688899999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++++|.++++. ....+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 154 (256)
T cd05112 81 MEHGCLSDYLRA---QRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ 154 (256)
T ss_pred CCCCcHHHHHHh---CccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCc
Confidence 999999998863 234688999999999999999999999 99999999999999999999999999987554322
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
........++.+|+|||++.+..++.++||||||+++|||++ |+.||+
T Consensus 155 ~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~ 203 (256)
T cd05112 155 YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYE 203 (256)
T ss_pred ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCC
Confidence 222223345678999999998889999999999999999998 999986
No 198
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-34 Score=282.73 Aligned_cols=196 Identities=27% Similarity=0.425 Sum_probs=174.8
Q ss_pred cceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCC
Q 007107 415 EFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (618)
Q Consensus 415 ~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 493 (618)
.++||+|.||+||-|.++ +|+.||||++.+-....+.+.++++|+.+++.+.||.||.+--.|+..+..+.|||-+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G- 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG- 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-
Confidence 568999999999999765 699999999998888777889999999999999999999999999999999999999966
Q ss_pred ChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC---CCcEEeeccccccCCCCCc
Q 007107 494 NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE---LNPHLSDCGLAALTPNTER 570 (618)
Q Consensus 494 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~---~~~kl~Dfgl~~~~~~~~~ 570 (618)
++.+.+-. .+.+++++.....++.||+.||.|||-+ +|+|+||||+|||+... -.+||+|||+|+...+ .
T Consensus 648 DMLEMILS--sEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE--k 720 (888)
T KOG4236|consen 648 DMLEMILS--SEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE--K 720 (888)
T ss_pred hHHHHHHH--hhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecch--h
Confidence 55454432 3567899988889999999999999999 99999999999999743 4689999999998864 4
Q ss_pred cccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCCC
Q 007107 571 QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
.....++|||.|+|||++....|...-|+||+|||+|-=++|..||++
T Consensus 721 sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE 768 (888)
T KOG4236|consen 721 SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE 768 (888)
T ss_pred hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC
Confidence 556678999999999999999999999999999999999999999974
No 199
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=3.7e-32 Score=271.69 Aligned_cols=201 Identities=26% Similarity=0.354 Sum_probs=169.7
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc---cHHHHHHHHHHHHHhhcCCCCcccccceEEeeC--CeE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL---SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQR 483 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 483 (618)
.+|...+.||+|+||.||+|... +|+.||+|.+..... .......+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888899999999999999875 489999998753321 223456788899999999999999999988764 467
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++||||+++++|.+++.. ...+++.....++.|++.||+|||+. +|+|+||||+||++++++.++|+|||++.
T Consensus 82 ~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~ 154 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKS----YGALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASK 154 (265)
T ss_pred EEEEEecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCcccc
Confidence 899999999999998862 34578888999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCc--cccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTER--QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
....... .......|+..|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~ 210 (265)
T cd06652 155 RLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWA 210 (265)
T ss_pred ccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCC
Confidence 5432211 11223468899999999988889999999999999999999999985
No 200
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.8e-32 Score=273.18 Aligned_cols=197 Identities=28% Similarity=0.385 Sum_probs=161.0
Q ss_pred eeccCccceEEEEEEcC---CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCC
Q 007107 417 LIGEGSLGRVYRAEFAN---GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (618)
Q Consensus 417 ~Lg~G~~g~Vy~~~~~~---g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 493 (618)
.||+|+||.||+|...+ ...+++|.+.... .......+.+|++.++.++||||+++++.+...+..++||||+++|
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA-TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC-ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 58999999999997543 3568888776433 3445567889999999999999999999999999999999999999
Q ss_pred ChhhhhhcccCC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCcc-
Q 007107 494 NLHDMLHFADDS-SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ- 571 (618)
Q Consensus 494 sL~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~- 571 (618)
+|.++++..... ....++.....++.||+.||+|||++ +|+||||||+||++++++.+||+|||++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 999999754322 23456788899999999999999999 9999999999999999999999999998654322111
Q ss_pred ccccccccccccCcccccc-------CCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 572 VSTQMVGAFGYSAPEFALS-------GIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
......++..|+|||++.. ..++.++|||||||++|||++ |+.||.
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~ 211 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYP 211 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCC
Confidence 1123356778999998753 356889999999999999999 888885
No 201
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2.2e-32 Score=277.56 Aligned_cols=208 Identities=29% Similarity=0.490 Sum_probs=174.9
Q ss_pred hhhhcCCcccceeccCccceEEEEEEcC------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEe
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCA 478 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 478 (618)
....++|+..+.||+|+||.||++...+ ...+|+|.+.... ..+....+.+|++++.++ +|+||+++++++.
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 86 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT 86 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence 3455678888999999999999997643 3678999987543 334456788999999999 7999999999999
Q ss_pred eCCeEEEEEEecCCCChhhhhhccc------------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCe
Q 007107 479 EHGQRLLVYEYVGNGNLHDMLHFAD------------DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANI 546 (618)
Q Consensus 479 ~~~~~~lv~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Ni 546 (618)
..+..+++|||+++|+|.++++... .....+++..++.++.|++.||+|||+. +|+||||||+||
T Consensus 87 ~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Ni 163 (293)
T cd05053 87 QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNV 163 (293)
T ss_pred CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeE
Confidence 9999999999999999999986422 2345789999999999999999999998 999999999999
Q ss_pred eecCCCCcEEeeccccccCCCCCccc-cccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 547 LLDDELNPHLSDCGLAALTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 547 Ll~~~~~~kl~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
++++++.+||+|||+++......... .....++..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 164 l~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 236 (293)
T cd05053 164 LVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYP 236 (293)
T ss_pred EEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCC
Confidence 99999999999999998664332211 122245678999999998899999999999999999998 999985
No 202
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.1e-32 Score=275.29 Aligned_cols=206 Identities=26% Similarity=0.407 Sum_probs=173.8
Q ss_pred hhcCCcccceeccCccceEEEEEEcC------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (618)
..++|...+.||+|+||.||+|...+ +..||+|.+.... .......+.+|+.+++.++||||+++++++...+
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~ 82 (277)
T cd05032 4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ 82 (277)
T ss_pred chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC
Confidence 34678888999999999999997653 4689999986543 3344567889999999999999999999999999
Q ss_pred eEEEEEEecCCCChhhhhhcccCC------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcE
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDS------SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPH 555 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~k 555 (618)
..++||||+++|+|.+++...... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+|
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~k 159 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEE
Confidence 999999999999999998643221 23478889999999999999999998 999999999999999999999
Q ss_pred EeeccccccCCCCCcc-ccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 556 LSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 556 l~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
|+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||+| |+.||.
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 223 (277)
T cd05032 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQ 223 (277)
T ss_pred ECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCc
Confidence 9999998765433221 1223456789999999998889999999999999999998 999985
No 203
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=3.7e-32 Score=272.36 Aligned_cols=197 Identities=29% Similarity=0.393 Sum_probs=163.1
Q ss_pred eeccCccceEEEEEEcC---CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCC
Q 007107 417 LIGEGSLGRVYRAEFAN---GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (618)
Q Consensus 417 ~Lg~G~~g~Vy~~~~~~---g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 493 (618)
.||+|+||.||+|.+.+ +..+|+|+++... .......+.+|+..+++++||||+++++++.+....++||||+++|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA-SVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 58999999999997653 4578999887554 2344567889999999999999999999999999999999999999
Q ss_pred ChhhhhhcccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccc
Q 007107 494 NLHDMLHFADD-SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (618)
Q Consensus 494 sL~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~ 572 (618)
+|.++++.... .....++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||++..........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 99999974332 223467778889999999999999999 99999999999999999999999999986543322111
Q ss_pred -cccccccccccCccccccC-------CccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 573 -STQMVGAFGYSAPEFALSG-------IYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 573 -~~~~~gt~~y~aPE~~~~~-------~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.....++..|+|||++.+. .++.++||||||+++|||++ |+.||.
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~ 211 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYR 211 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCC
Confidence 1234578889999998642 35789999999999999996 999985
No 204
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=3.3e-32 Score=272.40 Aligned_cols=201 Identities=28% Similarity=0.466 Sum_probs=170.9
Q ss_pred cCCcccceeccCccceEEEEEEc----CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
.+|...+.||+|+||.||+|.+. .+..+|+|.++... .....+.+.+|+..+++++||||+++++++...+..++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMI 82 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 46778889999999999999764 23479999987543 33445688999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+++++|.+++.. ....+++.++..++.|++.|++|||+. +++||||||+||++++++.++|+|||++...
T Consensus 83 v~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 83 VTEYMENGSLDAFLRK---HDGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred EEEcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 9999999999999863 235689999999999999999999999 9999999999999999999999999999766
Q ss_pred CCCCccccc--cccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 566 PNTERQVST--QMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
......... ...++..|+|||++.+..++.++||||||+++||+++ |+.||.
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~ 211 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 211 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcc
Confidence 443322211 1233568999999998899999999999999999887 999985
No 205
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3.3e-32 Score=275.57 Aligned_cols=207 Identities=25% Similarity=0.411 Sum_probs=171.7
Q ss_pred hhhcCCcccceeccCccceEEEEEEcC------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH 480 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 480 (618)
...++|+..+.||+|+||.||+|...+ +..||+|.+.... .......+.+|+..++.++||||+++++++.+.
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 345788999999999999999996542 4579999886543 233455688899999999999999999999999
Q ss_pred CeEEEEEEecCCCChhhhhhcccCC------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCc
Q 007107 481 GQRLLVYEYVGNGNLHDMLHFADDS------SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNP 554 (618)
Q Consensus 481 ~~~~lv~e~~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~ 554 (618)
+..++||||+++|+|.++++..... ....++..+..++.|++.||+|||++ +|+||||||+||++++++.+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~ 158 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTV 158 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcE
Confidence 9999999999999999999643211 23456778899999999999999999 99999999999999999999
Q ss_pred EEeeccccccCCCCCccc-cccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 555 HLSDCGLAALTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 555 kl~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
||+|||+++......... .....++..|+|||.+.+..++.++|||||||++|||++ |+.||.
T Consensus 159 ~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~ 223 (288)
T cd05061 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ 223 (288)
T ss_pred EECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCC
Confidence 999999987553322211 122345678999999999899999999999999999998 788885
No 206
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=4.1e-32 Score=270.05 Aligned_cols=193 Identities=25% Similarity=0.417 Sum_probs=162.5
Q ss_pred eeccCccceEEEEEEc---CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCC
Q 007107 417 LIGEGSLGRVYRAEFA---NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (618)
Q Consensus 417 ~Lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 493 (618)
.||+|+||.||+|.+. .+..||+|.+.... .....+.+.+|+.++++++||||+++++++. .+..++||||++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCC
Confidence 3899999999999764 35679999987543 3344567899999999999999999999875 45789999999999
Q ss_pred ChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCcccc
Q 007107 494 NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVS 573 (618)
Q Consensus 494 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~~ 573 (618)
+|.++++. ....+++..+.+++.|++.||+|||++ +++||||||+||+++.++.+||+|||++...........
T Consensus 80 ~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 153 (257)
T cd05115 80 PLNKFLSG---KKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK 153 (257)
T ss_pred CHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCcccee
Confidence 99998863 245689999999999999999999998 999999999999999999999999999976543322211
Q ss_pred --ccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 574 --TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 574 --~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
....++..|+|||.+....++.++|||||||++|||++ |+.||.
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 200 (257)
T cd05115 154 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYK 200 (257)
T ss_pred ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcC
Confidence 11234578999999988889999999999999999996 999996
No 207
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.3e-32 Score=277.77 Aligned_cols=207 Identities=29% Similarity=0.485 Sum_probs=173.4
Q ss_pred hhhcCCcccceeccCccceEEEEEEc--------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA--------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYC 477 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 477 (618)
....+|...+.||+|+||.||+|.+. ++..||+|.+.... .....+.+.+|+..++.+ +||||+++++++
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 90 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 90 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc-chHHHHHHHHHHHHHHhhccCCCchheeEEE
Confidence 44567888899999999999999642 24579999887543 334557788999999999 899999999999
Q ss_pred eeCCeEEEEEEecCCCChhhhhhcccC------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCC
Q 007107 478 AEHGQRLLVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSAN 545 (618)
Q Consensus 478 ~~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~N 545 (618)
...+..++||||+++|+|.+++..... ....+++..+..++.||+.||+|||+. +|+||||||+|
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~N 167 (304)
T cd05101 91 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARN 167 (304)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeecccccce
Confidence 999999999999999999999874321 124578889999999999999999999 99999999999
Q ss_pred eeecCCCCcEEeeccccccCCCCCccc-cccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 546 ILLDDELNPHLSDCGLAALTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 546 iLl~~~~~~kl~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
|++++++.+||+|||+++......... .....+++.|+|||++.+..++.++||||||+++|||++ |..||.
T Consensus 168 ili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 241 (304)
T cd05101 168 VLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 241 (304)
T ss_pred EEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcc
Confidence 999999999999999997664332221 122345678999999999899999999999999999998 888875
No 208
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.2e-32 Score=270.51 Aligned_cols=200 Identities=26% Similarity=0.407 Sum_probs=173.4
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+|+..+.||+|+||.||++... +++.+|+|.++... .....+.+.+|+.+++.++|+||+++++.+.+.+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK-SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc-chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence 4677889999999999999776 58899999886433 233456788899999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++++|.+++... ....+++..+..++.|++.||+|||+. +|+|+||||+||++++++.++++|||.+.......
T Consensus 80 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 80 CDGGDLMQKIKLQ--RGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG 154 (255)
T ss_pred CCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecccc
Confidence 9999999988532 234578999999999999999999999 99999999999999999999999999987654322
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. ......|++.|+|||++.+..++.++||||||+++|+|++|+.||+
T Consensus 155 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~ 201 (255)
T cd08219 155 A-YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQ 201 (255)
T ss_pred c-ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCC
Confidence 2 2233568899999999998889999999999999999999999996
No 209
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=5.2e-32 Score=270.80 Aligned_cols=201 Identities=26% Similarity=0.377 Sum_probs=170.2
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc---cHHHHHHHHHHHHHhhcCCCCcccccceEEeeC--CeE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL---SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQR 483 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 483 (618)
.+|...+.||+|+||.||+|... .++.|++|++..... ..+....+.+|++++++++||||+++++++... +..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 46888899999999999999775 588999998864422 223446788999999999999999999988753 577
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++++||+++++|.+++. ....+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 82 ~l~~e~~~~~~L~~~l~----~~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~ 154 (266)
T cd06651 82 TIFMEYMPGGSVKDQLK----AYGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154 (266)
T ss_pred EEEEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcc
Confidence 89999999999999986 234588999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCC--ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTE--RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
...... ........++..|+|||.+.+..++.++|||||||++|||++|+.||.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~ 210 (266)
T cd06651 155 RLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWA 210 (266)
T ss_pred ccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCcc
Confidence 553211 111123458899999999998889999999999999999999999996
No 210
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=4e-32 Score=273.59 Aligned_cols=201 Identities=26% Similarity=0.437 Sum_probs=168.7
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCc----EEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
..+|+..+.||+|+||.||+|.+. +|+ .||+|.++... .......+.+|+..++.++||||+++++++.. ...
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~ 83 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT-SPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STV 83 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC-CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCc
Confidence 356788899999999999999754 444 48999886543 33445678899999999999999999999875 457
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++++||+++|+|.++++. ....+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++
T Consensus 84 ~l~~~~~~~g~l~~~l~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~ 157 (279)
T cd05109 84 QLVTQLMPYGCLLDYVRE---NKDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (279)
T ss_pred EEEEEcCCCCCHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCcee
Confidence 899999999999999863 235689999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCccc-cccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 564 LTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
......... .....+++.|+|||.+.+..++.++|||||||++|||++ |+.||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~ 213 (279)
T cd05109 158 LLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYD 213 (279)
T ss_pred ecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Confidence 664332221 122345678999999999899999999999999999998 999986
No 211
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=3.8e-32 Score=270.82 Aligned_cols=201 Identities=26% Similarity=0.464 Sum_probs=172.5
Q ss_pred hhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
..++|...+.||+|+||.||+|...++..+++|.++... ...+.+.+|++++++++|+||+++++++.. ...+++|
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~ 79 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 79 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh---hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEE
Confidence 346788899999999999999998888889999887532 245678899999999999999999999887 7789999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++++|.++++.. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+.....
T Consensus 80 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 154 (260)
T cd05073 80 EFMAKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 154 (260)
T ss_pred EeCCCCcHHHHHHhC--CccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccC
Confidence 999999999998632 245678889999999999999999998 999999999999999999999999999876543
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
..........++..|+|||++....++.++|||||||++|+++| |+.||.
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~ 205 (260)
T cd05073 155 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYP 205 (260)
T ss_pred CCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCC
Confidence 32222223345678999999998889999999999999999999 999985
No 212
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=5.9e-32 Score=269.84 Aligned_cols=200 Identities=30% Similarity=0.471 Sum_probs=175.3
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+|...+.||+|+||.||+|... +++.|++|.++.........+.+.+|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4777889999999999999765 689999999886655545678899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++++|.++++ ....+++..+..++.|+++|++|||+. +|+|+||+|+||++++++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 81 CSGGTLEELLE----HGRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred CCCCcHHHHHh----hcCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 99999999986 234578889999999999999999999 99999999999999999999999999987664433
Q ss_pred ccccc---cccccccccCccccccCC---ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVST---QMVGAFGYSAPEFALSGI---YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~---~~~gt~~y~aPE~~~~~~---~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..... ...++..|+|||++.+.. ++.++||||||+++|||++|+.||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~ 207 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWS 207 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCcc
Confidence 22211 356788999999998766 8899999999999999999999995
No 213
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.3e-32 Score=276.36 Aligned_cols=200 Identities=26% Similarity=0.407 Sum_probs=172.4
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
++|+..+.||+|+||.||+|... +++.||+|++..........+.+.+|+++++.++||||+++++++...+..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 36788899999999999999886 48999999987654443445678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+++++|.++.. ....+++..+..++.|++.||+|||+. +++||||+|+||++++++.++|+|||++......
T Consensus 81 ~~~~~~l~~~~~----~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 81 FVDHTVLDDLEK----YPNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred cCCccHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 999999988765 234589999999999999999999999 9999999999999999999999999998765433
Q ss_pred CccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. ......++..|+|||++.+ ..++.++||||||+++|||++|+.||.
T Consensus 154 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~ 202 (286)
T cd07846 154 GE-VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFP 202 (286)
T ss_pred cc-ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCC
Confidence 32 2233568899999999876 447889999999999999999999984
No 214
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=4.3e-32 Score=275.00 Aligned_cols=203 Identities=29% Similarity=0.483 Sum_probs=169.9
Q ss_pred CCcccceeccCccceEEEEEEc------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
+|+..+.||+|+||.||+|... ....+++|.+.... ......++.+|+..++.++||||+++++.+...+..+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA-SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLL 79 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC-CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcE
Confidence 3667789999999999999753 23578888886543 3344567889999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccC--------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCC
Q 007107 485 LVYEYVGNGNLHDMLHFADD--------------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSA 544 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~ 544 (618)
+++||+.+++|.+++...+. ....+++..++.++.|++.||+|||+. +++||||||+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~ 156 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAAR 156 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhh
Confidence 99999999999998864321 123578999999999999999999998 9999999999
Q ss_pred CeeecCCCCcEEeeccccccCCCCCccc-cccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 545 NILLDDELNPHLSDCGLAALTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 545 NiLl~~~~~~kl~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
||++++++.+||+|||+++......... .....++..|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 157 nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~ 231 (290)
T cd05045 157 NVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP 231 (290)
T ss_pred eEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999997653322211 122345678999999988889999999999999999998 999986
No 215
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.9e-32 Score=273.48 Aligned_cols=202 Identities=28% Similarity=0.478 Sum_probs=169.8
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeC----
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEH---- 480 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~---- 480 (618)
.+.+.|+..+.||+|+||.||+|... +++.+|+|++.... .....+..|+.++.++ +|+||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 79 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC---ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCC
Confidence 35667888889999999999999775 48889999986443 2345678889998888 699999999998753
Q ss_pred --CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEee
Q 007107 481 --GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSD 558 (618)
Q Consensus 481 --~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~D 558 (618)
...++||||+++++|.+++... ....+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~D 154 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 154 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEcc
Confidence 4689999999999999998642 234688999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCccccccccccccccCccccc-----cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 559 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
||++........ ......|+..|+|||++. ...++.++|||||||++|||++|+.||+
T Consensus 155 fg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~ 217 (272)
T cd06637 155 FGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLC 217 (272)
T ss_pred CCCceecccccc-cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 999876543221 223457899999999986 3457889999999999999999999985
No 216
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=4.2e-32 Score=269.62 Aligned_cols=198 Identities=28% Similarity=0.488 Sum_probs=175.0
Q ss_pred hcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.++|+..+.||+|+||.||+|...+ ++.+++|.+.... ..+++.+|++.+++++||||+++++++...+..++++
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 4678888999999999999998875 7899999986432 2678899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++++|.++++. ....+++..+..++.|++.|++|||+. +++||||+|+||++++++.+||+|||++.....
T Consensus 78 e~~~~~~L~~~l~~---~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~ 151 (256)
T cd06612 78 EYCGAGSVSDIMKI---TNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD 151 (256)
T ss_pred ecCCCCcHHHHHHh---CccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhccc
Confidence 99999999999863 245689999999999999999999999 999999999999999999999999999876543
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... ......++..|+|||++.+..++.++||||||+++|||++|+.||+
T Consensus 152 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~ 200 (256)
T cd06612 152 TMA-KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYS 200 (256)
T ss_pred Ccc-ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 321 2233458889999999999899999999999999999999999985
No 217
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=3.3e-32 Score=286.39 Aligned_cols=208 Identities=28% Similarity=0.446 Sum_probs=172.7
Q ss_pred hhhhcCCcccceeccCccceEEEEEEc------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-CCcccccceEEe
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCA 478 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~ 478 (618)
+...++|...+.||+|+||.||+|.+. .++.||+|+++.... ....+.+.+|++++.++. ||||+++++++.
T Consensus 33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR-SSEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC-hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 334556788889999999999999864 246899999976432 333457889999999997 999999999999
Q ss_pred eCCeEEEEEEecCCCChhhhhhcccC------------------------------------------------------
Q 007107 479 EHGQRLLVYEYVGNGNLHDMLHFADD------------------------------------------------------ 504 (618)
Q Consensus 479 ~~~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------ 504 (618)
..+..++||||+++|+|.++++....
T Consensus 112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (401)
T cd05107 112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP 191 (401)
T ss_pred cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence 99999999999999999999964321
Q ss_pred ----------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCC
Q 007107 505 ----------------------------------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSA 544 (618)
Q Consensus 505 ----------------------------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~ 544 (618)
....+++..+..++.|++.||+|||+. +|+||||||+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~ 268 (401)
T cd05107 192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAAR 268 (401)
T ss_pred hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcc
Confidence 112367778899999999999999998 9999999999
Q ss_pred CeeecCCCCcEEeeccccccCCCCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 545 NILLDDELNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 545 NiLl~~~~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
|||+++++.+||+|||+++....... .......++..|+|||.+.+..++.++|||||||++|||++ |+.||.
T Consensus 269 NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~ 343 (401)
T cd05107 269 NVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYP 343 (401)
T ss_pred eEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999999976532221 11123457889999999998889999999999999999998 899985
No 218
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.2e-32 Score=278.25 Aligned_cols=206 Identities=29% Similarity=0.478 Sum_probs=171.7
Q ss_pred hhcCCcccceeccCccceEEEEEEcC--------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEe
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN--------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCA 478 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 478 (618)
..++|...+.||+|+||.||+|...+ +..+|+|.++... .......+.+|+++++++ +||||+++++++.
T Consensus 16 ~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 16 PRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred ehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 34678899999999999999997532 3569999997543 334456788899999999 7999999999999
Q ss_pred eCCeEEEEEEecCCCChhhhhhcccC------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCe
Q 007107 479 EHGQRLLVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANI 546 (618)
Q Consensus 479 ~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Ni 546 (618)
..+..++||||+++|+|.++++.... ....+++.++..++.|++.||+|||+. +++||||||+||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni 171 (307)
T cd05098 95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 171 (307)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHhe
Confidence 99999999999999999999975322 123588999999999999999999998 999999999999
Q ss_pred eecCCCCcEEeeccccccCCCCCccc-cccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 547 LLDDELNPHLSDCGLAALTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 547 Ll~~~~~~kl~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
++++++.+||+|||.++......... .....++..|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 172 ll~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~ 244 (307)
T cd05098 172 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 244 (307)
T ss_pred EEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCC
Confidence 99999999999999987654322111 111234568999999999999999999999999999998 888885
No 219
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=3.7e-32 Score=275.02 Aligned_cols=200 Identities=29% Similarity=0.397 Sum_probs=174.6
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+|+..+.||+|++|.||+|... +++.|++|+++.........+.+.+|++++++++|+||+++++++...+..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 6888899999999999999876 488999999876544444567889999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
++++.+..+.+ ....+++..+..++.|++.|++|||+. +++||||+|+||++++++.+||+|||++.......
T Consensus 82 ~~~~~l~~~~~----~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 154 (288)
T cd07833 82 VERTLLELLEA----SPGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARP 154 (288)
T ss_pred CCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence 99877766554 335589999999999999999999999 99999999999999999999999999997765444
Q ss_pred ccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
........++..|+|||++.+. .++.++||||||+++|||++|+.||.
T Consensus 155 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~ 203 (288)
T cd07833 155 ASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFP 203 (288)
T ss_pred cccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCC
Confidence 3233445788999999999888 78999999999999999999999985
No 220
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3e-33 Score=243.23 Aligned_cols=197 Identities=25% Similarity=0.382 Sum_probs=172.3
Q ss_pred CCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+|...+.||+|.||+||+|+..+ ++.||+|++.............++|+.+++.++|.|||+++++.+.+...-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 46778899999999999997654 88999999987665555667788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
|.. +|..+.. .-.+.++...+..++.|+++||.|+|+. ++.||||||.|.||+.+|++|++|||+++-+.-..
T Consensus 83 cdq-dlkkyfd---slng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 83 CDQ-DLKKYFD---SLNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV 155 (292)
T ss_pred hhH-HHHHHHH---hcCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence 965 6766664 4567899999999999999999999999 99999999999999999999999999999876555
Q ss_pred ccccccccccccccCccccccCC-ccccchhhhHHHHHHHHHhCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGI-YTVKSDVYSFGVVMLELLTGRKP 615 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~il~elltg~~P 615 (618)
.+++. .+-|..|++|.++.+.+ |+...|+||-|||+.|+.....|
T Consensus 156 rcysa-evvtlwyrppdvlfgakly~tsidmwsagcifaelanagrp 201 (292)
T KOG0662|consen 156 RCYSA-EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 201 (292)
T ss_pred Eeeec-eeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCC
Confidence 44443 45789999999999876 89999999999999999985554
No 221
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=4.3e-32 Score=273.86 Aligned_cols=202 Identities=31% Similarity=0.438 Sum_probs=167.1
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHH-hhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
++|+..+.||+|+||.||+|... +|+.||+|+++...... ...++..|+.. ++..+||||+++++++...+..++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 79 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ-EQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM 79 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH-HHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence 36788899999999999999876 58999999987654333 23445555554 56678999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||++ |+|.++++........+++..++.++.|++.||+|||++. +++||||||+||++++++.+||+|||++.....
T Consensus 80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 80 EVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 9996 6888888654444567899999999999999999999853 899999999999999999999999999876532
Q ss_pred CCccccccccccccccCcccccc----CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALS----GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. ......|+..|+|||.+.+ ..++.++|+|||||++|||++|+.||+
T Consensus 157 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~ 208 (283)
T cd06617 157 SV--AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYD 208 (283)
T ss_pred cc--ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCC
Confidence 21 1223468889999998865 446889999999999999999999996
No 222
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=3.5e-32 Score=277.16 Aligned_cols=199 Identities=25% Similarity=0.401 Sum_probs=168.2
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
++|...+.||+|+||.||+|... +++.||+|.++..... .....+.+|+..+++++||||+++++++...+..++|||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 84 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 84 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEe
Confidence 56888899999999999999775 5789999998644322 223457789999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|++ ++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 85 ~~~-~~l~~~l~~---~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 157 (301)
T cd07873 85 YLD-KDLKQYLDD---CGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 157 (301)
T ss_pred ccc-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCC
Confidence 997 588888753 234688999999999999999999999 9999999999999999999999999998754322
Q ss_pred CccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... .....+++.|+|||++.+. .++.++|||||||++|||+||+.||.
T Consensus 158 ~~~-~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~ 206 (301)
T cd07873 158 TKT-YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFP 206 (301)
T ss_pred CCc-ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCC
Confidence 211 1234578899999998754 57889999999999999999999985
No 223
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3.3e-32 Score=279.49 Aligned_cols=194 Identities=26% Similarity=0.450 Sum_probs=158.8
Q ss_pred ceeccCccceEEEEEEcC---CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee--CCeEEEEEEec
Q 007107 416 FLIGEGSLGRVYRAEFAN---GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE--HGQRLLVYEYV 490 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~~---g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~ 490 (618)
..||+|+||.||+|...+ ++.||+|.+..... ...+.+|++++++++||||+++++++.. ....++|+||+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYA 82 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeee
Confidence 479999999999998653 57899998865432 2356789999999999999999998854 45789999998
Q ss_pred CCCChhhhhhcccC-----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeee----cCCCCcEEeeccc
Q 007107 491 GNGNLHDMLHFADD-----SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL----DDELNPHLSDCGL 561 (618)
Q Consensus 491 ~~gsL~~~l~~~~~-----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl----~~~~~~kl~Dfgl 561 (618)
++ +|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+
T Consensus 83 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 83 EH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred CC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 75 77777753221 223588899999999999999999999 99999999999999 4667899999999
Q ss_pred cccCCCCCcc--ccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNTERQ--VSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++........ ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||.
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~ 217 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcc
Confidence 9866433221 1234578999999999976 457999999999999999999999985
No 224
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.9e-32 Score=272.69 Aligned_cols=199 Identities=29% Similarity=0.425 Sum_probs=170.9
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.++|...+.||+|+||.||+|... +++.||+|.++... ......+.+|+.+++.++||||+++++.+...+..++||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~ 85 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP--GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICM 85 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Confidence 356788889999999999999765 58899999986543 223456788999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++++|.++++ ..+.+++.++..++.|++.|++|||+. +++|+||||+||+++.++.+||+|||++.....
T Consensus 86 e~~~~~~L~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06645 86 EFCGGGSLQDIYH----VTGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITA 158 (267)
T ss_pred eccCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccC
Confidence 9999999999886 345689999999999999999999999 999999999999999999999999999865532
Q ss_pred CCccccccccccccccCccccc---cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. .......|+..|+|||++. ...++.++|||||||++|||++|+.||.
T Consensus 159 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~ 210 (267)
T cd06645 159 TI-AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMF 210 (267)
T ss_pred cc-cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcc
Confidence 21 1223457899999999985 4558899999999999999999999974
No 225
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=6.3e-32 Score=272.62 Aligned_cols=197 Identities=27% Similarity=0.438 Sum_probs=168.8
Q ss_pred CcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEec
Q 007107 412 FSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYV 490 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 490 (618)
|+..+.||+|+||.||+|.... +..+++|.+.... ......+.+|+++++.++||||+++++++...+..++|+||+
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~ 84 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS--EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC 84 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC--HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEec
Confidence 5677889999999999998764 7788999886432 344567889999999999999999999999999999999999
Q ss_pred CCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCc
Q 007107 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570 (618)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~ 570 (618)
++++|.+++.. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 85 ~~~~l~~~~~~---~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~- 157 (282)
T cd06643 85 AGGAVDAVMLE---LERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI- 157 (282)
T ss_pred CCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccc-
Confidence 99999888752 235689999999999999999999999 99999999999999999999999999987553322
Q ss_pred cccccccccccccCccccc-----cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 571 QVSTQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.......+++.|+|||++. +..++.++|||||||++|||++|+.||.
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~ 209 (282)
T cd06643 158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHH 209 (282)
T ss_pred cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCcc
Confidence 1223356899999999984 3457889999999999999999999986
No 226
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=6.8e-32 Score=268.33 Aligned_cols=201 Identities=27% Similarity=0.412 Sum_probs=173.4
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee-CCeEEEEEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQRLLVYE 488 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e 488 (618)
.|+..+.||+|++|.||++... +++.+|+|++..........+.+.+|++.+++++|+|++++++.+.. ....++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4778899999999999999765 47889999987655555566778899999999999999999988764 446799999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+++++|.++++.. ....+++.++..++.|++.|++|||+. +++||||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~l~~~l~~~--~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 81 FCEGGDLYHKLKEQ--KGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred ccCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 99999999988632 234689999999999999999999999 9999999999999999999999999999766433
Q ss_pred CccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. ......+++.|+|||++.+..++.++||||||+++|||++|+.||+
T Consensus 156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~ 203 (257)
T cd08223 156 CD-MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFN 203 (257)
T ss_pred CC-ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCC
Confidence 22 2234568899999999999999999999999999999999999986
No 227
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=6.8e-32 Score=277.06 Aligned_cols=203 Identities=28% Similarity=0.402 Sum_probs=174.5
Q ss_pred cCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccH-HHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSL-QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
++|+..+.||+|++|.||+|...+ ++.||+|.+....... ...+.+.+|++.++.++||||+++++.+...+..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 367888899999999999998764 8999999997654332 35567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+.+++|.++++.. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 81 DYCPGGELFRLLQRQ--PGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred EecCCCCHHHHHHhC--CCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence 999999999988632 245789999999999999999999999 999999999999999999999999999864422
Q ss_pred CCc----------------------------cccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TER----------------------------QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... .......||..|+|||++.+..++.++||||||+++|+|++|+.||.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~ 233 (316)
T cd05574 156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFK 233 (316)
T ss_pred cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCC
Confidence 111 01113468899999999999889999999999999999999999985
No 228
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=4.9e-32 Score=273.54 Aligned_cols=197 Identities=28% Similarity=0.443 Sum_probs=166.6
Q ss_pred CcccceeccCccceEEEEEE-----cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC--CeEE
Q 007107 412 FSQEFLIGEGSLGRVYRAEF-----ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQRL 484 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 484 (618)
|...+.||+|+||.||++.. .+++.||+|.++... .......+.+|++.+++++||||+++++++... ...+
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQ 84 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEE
Confidence 37788999999999988643 357889999987543 233456788999999999999999999988654 3678
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||+++++|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++..
T Consensus 85 lv~e~~~~~~l~~~~~-----~~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 156 (283)
T cd05080 85 LIMEYVPLGSLRDYLP-----KHKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 156 (283)
T ss_pred EEecCCCCCCHHHHHH-----HcCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccc
Confidence 9999999999999985 24589999999999999999999999 999999999999999999999999999976
Q ss_pred CCCCCccc--cccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 565 TPNTERQV--STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
........ .....++..|+|||.+.+..++.++||||||+++|||+||+.||.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~ 211 (283)
T cd05080 157 VPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQ 211 (283)
T ss_pred cCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCC
Confidence 65332211 122345667999999998889999999999999999999999975
No 229
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.98 E-value=7.4e-32 Score=268.82 Aligned_cols=200 Identities=30% Similarity=0.452 Sum_probs=173.9
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.++|+..+.||+|+||.||+|... +++.+++|.+..... ...+.+.+|++++++++||||+++++++...+..+++|
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG--DDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch--hhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 357888899999999999999875 478899999875432 24577889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++++|.++++. ....+++..+..++.|++.||+|||+. +++|+||+|+||++++++.+||+|||.+.....
T Consensus 80 e~~~~~~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~ 153 (262)
T cd06613 80 EYCGGGSLQDIYQV---TRGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTA 153 (262)
T ss_pred eCCCCCcHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhh
Confidence 99999999998863 235689999999999999999999998 999999999999999999999999999876543
Q ss_pred CCccccccccccccccCccccccC---CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSG---IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... ......++..|+|||.+.+. .++.++||||||+++|||+||+.||.
T Consensus 154 ~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~ 205 (262)
T cd06613 154 TIA-KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMF 205 (262)
T ss_pred hhh-ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCC
Confidence 221 12335688899999999876 78999999999999999999999985
No 230
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.98 E-value=6.9e-32 Score=269.97 Aligned_cols=200 Identities=29% Similarity=0.472 Sum_probs=170.8
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccH-------HHHHHHHHHHHHhhcCCCCcccccceEEeeCCe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL-------QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (618)
+|.....||+|++|.||+|... +++.+|+|.+....... +..+.+.+|++++++++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 3666778999999999999765 58899999886543221 123568899999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccc
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~ 562 (618)
.++||||+++++|.+++.. .+.+++..+..++.|++.||+|||+. +++||||+|+||++++++.+||+|||.+
T Consensus 81 ~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~ 153 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNN----YGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGIS 153 (267)
T ss_pred cEEEEEecCCCCHHHHHHh----ccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCC
Confidence 9999999999999999963 35688899999999999999999998 9999999999999999999999999998
Q ss_pred ccCCCCCc-----cccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 563 ALTPNTER-----QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+....... .......|+..|+|||.+.+..++.++||||+|+++|||++|+.||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 213 (267)
T cd06628 154 KKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFP 213 (267)
T ss_pred cccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCC
Confidence 76542111 11123458889999999999889999999999999999999999996
No 231
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.98 E-value=3.9e-32 Score=274.30 Aligned_cols=203 Identities=26% Similarity=0.452 Sum_probs=169.6
Q ss_pred CCcccceeccCccceEEEEEEcC------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
+|...+.||+|+||.||+|...+ ++.||+|+++... .......+.+|+.++..++||||+++++++...+..+
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 46677789999999999997642 5789999997543 2334567889999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhccc------------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCC
Q 007107 485 LVYEYVGNGNLHDMLHFAD------------DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL 552 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~ 552 (618)
+++||+.+++|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+||++++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKL 161 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCC
Confidence 9999999999999985211 1123578889999999999999999999 999999999999999999
Q ss_pred CcEEeeccccccCCCCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 553 NPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 553 ~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.+||+|||+++....... .......+++.|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~ 228 (283)
T cd05091 162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 228 (283)
T ss_pred ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCC
Confidence 999999999876543221 11223356789999999988889999999999999999998 888885
No 232
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.98 E-value=6.1e-32 Score=270.71 Aligned_cols=201 Identities=28% Similarity=0.500 Sum_probs=169.6
Q ss_pred cCCcccceeccCccceEEEEEEcC-C---cEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFAN-G---KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~-g---~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
.+|...+.||+|+||.||+|.... + ..||+|.++... ......+|..|+..+++++||||+++++++...+..++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 82 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMI 82 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEE
Confidence 357778899999999999998753 3 369999987543 34456789999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+++++|.++++. ..+.+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 83 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~ 156 (269)
T cd05065 83 ITEFMENGALDSFLRQ---NDGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFL 156 (269)
T ss_pred EEecCCCCcHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccccc
Confidence 9999999999999863 235689999999999999999999998 9999999999999999999999999998765
Q ss_pred CCCCccc--cccc--cccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 566 PNTERQV--STQM--VGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 566 ~~~~~~~--~~~~--~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
....... .... ..+..|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~ 213 (269)
T cd05065 157 EDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 213 (269)
T ss_pred ccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCC
Confidence 4322111 1111 12457999999999999999999999999999887 999985
No 233
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.98 E-value=5.7e-32 Score=275.64 Aligned_cols=205 Identities=28% Similarity=0.432 Sum_probs=173.3
Q ss_pred hhhcCCcccceeccCccceEEEEEEc------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEee
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAE 479 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 479 (618)
...++|...+.||+|+||.||+|... .+..+|+|.++... .....+.+.+|+++++++ +||||+++++++..
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 110 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA-HSSEREALMSELKIMSHLGNHENIVNLLGACTI 110 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC-ChHHHHHHHHHHHHHHhccCCCCcceEEEEEec
Confidence 34567888999999999999999642 35579999887543 233456789999999999 79999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeec
Q 007107 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (618)
Q Consensus 480 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Df 559 (618)
.+..++||||+.+|+|.++++... ...+++.++..++.|++.||+|||+. +|+|+||||+||++++++.+|++||
T Consensus 111 ~~~~~lv~e~~~~~~L~~~i~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~df 185 (302)
T cd05055 111 GGPILVITEYCCYGDLLNFLRRKR--ESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDF 185 (302)
T ss_pred CCceEEEEEcCCCCcHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCC
Confidence 999999999999999999986322 23489999999999999999999998 9999999999999999999999999
Q ss_pred cccccCCCCCcc-ccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 560 GLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 560 gl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
|++......... ......++..|+|||.+.+..++.++||||+||++|||++ |+.||.
T Consensus 186 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~ 245 (302)
T cd05055 186 GLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYP 245 (302)
T ss_pred cccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcC
Confidence 999765433221 1222356788999999999999999999999999999998 999985
No 234
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.98 E-value=5.9e-32 Score=272.07 Aligned_cols=206 Identities=29% Similarity=0.439 Sum_probs=171.1
Q ss_pred hhcCCcccceeccCccceEEEEEEcC------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (618)
..++|...+.||+|++|.||+|.+.+ +..|++|.+.... .......+..|+.++++++|+||+++++++.+.+
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC-SEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL 82 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 34678888999999999999998754 5678888876433 3344567899999999999999999999999999
Q ss_pred eEEEEEEecCCCChhhhhhcccC---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCC---CcE
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL---NPH 555 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~---~~k 555 (618)
..++||||+++++|.++++..+. ....+++..+..++.||+.||+|||+. +++||||||+||++++++ .+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~k 159 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceE
Confidence 99999999999999999865432 123589999999999999999999999 999999999999998654 589
Q ss_pred EeeccccccCCCCCcc-ccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 556 LSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 556 l~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
|+|||+++........ .......+..|+|||++.+..++.++|||||||++|||++ |+.||+
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~ 223 (277)
T cd05036 160 IADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYP 223 (277)
T ss_pred eccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCC
Confidence 9999999765322111 1112234568999999999999999999999999999997 999986
No 235
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.98 E-value=6.3e-32 Score=274.62 Aligned_cols=205 Identities=26% Similarity=0.452 Sum_probs=170.8
Q ss_pred hcCCcccceeccCccceEEEEEEc-----------------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCccc
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-----------------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-----------------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 471 (618)
.++|+..+.||+|+||.||++... ++..+|+|++.... ......++.+|++.++.++|+||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-NKNARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcc
Confidence 457889999999999999998543 23468999987543 334557889999999999999999
Q ss_pred ccceEEeeCCeEEEEEEecCCCChhhhhhcccCC-------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCC
Q 007107 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDS-------SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSA 544 (618)
Q Consensus 472 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~ 544 (618)
++++++...+..++||||+++++|.+++...... ...+++.++..++.|++.||+|||+. +++||||||+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~ 159 (296)
T cd05095 83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATR 159 (296)
T ss_pred eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChh
Confidence 9999999999999999999999999998643211 13477889999999999999999999 9999999999
Q ss_pred CeeecCCCCcEEeeccccccCCCCCcc-ccccccccccccCccccccCCccccchhhhHHHHHHHHHh--CCCCCC
Q 007107 545 NILLDDELNPHLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT--GRKPLD 617 (618)
Q Consensus 545 NiLl~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt--g~~Pf~ 617 (618)
||++++++.++|+|||+++........ ......+++.|+|||...++.++.++|||||||++|||++ |..||.
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~ 235 (296)
T cd05095 160 NCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYS 235 (296)
T ss_pred eEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcc
Confidence 999999999999999999765332211 1122345678999999988889999999999999999998 778885
No 236
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.98 E-value=2.2e-32 Score=296.60 Aligned_cols=206 Identities=17% Similarity=0.233 Sum_probs=162.1
Q ss_pred hhhhcCCcccceeccCccceEEEEEEcC--CcEEEEEEc--------------C-cccccHHHHHHHHHHHHHhhcCCCC
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEFAN--GKIMAVKKI--------------D-NAALSLQEEDNFLEAVSNMSRLRHP 468 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~--g~~vavK~~--------------~-~~~~~~~~~~~~~~e~~~l~~l~h~ 468 (618)
.....+|+..+.||+|+||.||++.++. +...+.|.+ . ...........+.+|++++++++||
T Consensus 144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hp 223 (501)
T PHA03210 144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHE 223 (501)
T ss_pred hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCC
Confidence 3445789999999999999999986542 222222211 0 0011222345688999999999999
Q ss_pred cccccceEEeeCCeEEEEEEecCCCChhhhhhcccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCee
Q 007107 469 NIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD-SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANIL 547 (618)
Q Consensus 469 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiL 547 (618)
||+++++++...+..++|+|++. ++|.+++..... .........+..++.|++.||+|||++ +|+||||||+|||
T Consensus 224 nIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NIL 299 (501)
T PHA03210 224 NILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIF 299 (501)
T ss_pred CcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence 99999999999999999999985 467776642111 122334566788999999999999999 9999999999999
Q ss_pred ecCCCCcEEeeccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCC
Q 007107 548 LDDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKP 615 (618)
Q Consensus 548 l~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~P 615 (618)
++.++.+||+|||+++..............||..|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 300 l~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~ 367 (501)
T PHA03210 300 LNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFC 367 (501)
T ss_pred ECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 99999999999999987654443334456899999999999999999999999999999999998754
No 237
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.98 E-value=9.9e-32 Score=272.63 Aligned_cols=199 Identities=26% Similarity=0.441 Sum_probs=170.9
Q ss_pred cCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
+.|+..+.||+|+||.||+|.... ++.+++|.+... .....+.+.+|+++++.++||||+++++.+..++..++|||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 89 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE 89 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence 568888999999999999998764 889999998653 34456778899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+++++|..++.. ....+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 90 ~~~~~~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 163 (292)
T cd06644 90 FCPGGAVDAIMLE---LDRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT 163 (292)
T ss_pred cCCCCcHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceecccc
Confidence 9999999887753 235689999999999999999999998 9999999999999999999999999998654322
Q ss_pred CccccccccccccccCccccc-----cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. .......+++.|+|||++. ...++.++|||||||++|||++|+.||.
T Consensus 164 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~ 216 (292)
T cd06644 164 L-QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHH 216 (292)
T ss_pred c-cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCc
Confidence 1 1123456888999999985 3457889999999999999999999985
No 238
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.98 E-value=7.4e-32 Score=273.40 Aligned_cols=211 Identities=28% Similarity=0.413 Sum_probs=175.7
Q ss_pred eehhhhhhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEE
Q 007107 400 YTVASLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYC 477 (618)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 477 (618)
+++..+..+.++|...+.||+|+||.||+|... +++.+|+|.+.... .....+.+|+.+++++ +|||++++++++
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~~h~ni~~~~~~~ 88 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS---DVDEEIEAEYNILQSLPNHPNVVKFYGMF 88 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc---cHHHHHHHHHHHHHHhcCCCCeEEEEEEE
Confidence 455566677889999999999999999999775 58899999986432 1235567888888888 799999999998
Q ss_pred eeC-----CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCC
Q 007107 478 AEH-----GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL 552 (618)
Q Consensus 478 ~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~ 552 (618)
... +..++||||+++++|.++++........+++..++.++.|++.||+|||+. +++||||||+||++++++
T Consensus 89 ~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~ 165 (291)
T cd06639 89 YKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEG 165 (291)
T ss_pred EeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCC
Confidence 754 358999999999999998864433456789999999999999999999998 999999999999999999
Q ss_pred CcEEeeccccccCCCCCccccccccccccccCccccccCC-----ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 553 NPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGI-----YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 553 ~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.+||+|||++........ ......|+..|+|||++.... ++.++|||||||++|||++|+.||.
T Consensus 166 ~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~ 234 (291)
T cd06639 166 GVKLVDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLF 234 (291)
T ss_pred CEEEeecccchhcccccc-cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCC
Confidence 999999999876543221 122346889999999986432 6889999999999999999999985
No 239
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.98 E-value=5.4e-32 Score=275.00 Aligned_cols=206 Identities=26% Similarity=0.446 Sum_probs=171.0
Q ss_pred hhcCCcccceeccCccceEEEEEEcC---------------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccc
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN---------------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT 472 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~---------------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~ 472 (618)
..++|+..+.||+|+||.||++...+ ...||+|.+.... .......+.+|++.+++++|+||++
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~ 81 (295)
T cd05097 3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV-TKTARNDFLKEIKIMSRLKNPNIIR 81 (295)
T ss_pred chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCcCe
Confidence 34678889999999999999987642 2358999987543 3345567899999999999999999
Q ss_pred cceEEeeCCeEEEEEEecCCCChhhhhhcccC--------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCC
Q 007107 473 LAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD--------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSA 544 (618)
Q Consensus 473 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~ 544 (618)
+++++...+..++||||+++++|.+++..... ....+++..+..++.|++.||+|||+. +++||||||+
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~ 158 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATR 158 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChh
Confidence 99999999999999999999999999864211 112468889999999999999999999 9999999999
Q ss_pred CeeecCCCCcEEeeccccccCCCCCcc-ccccccccccccCccccccCCccccchhhhHHHHHHHHHh--CCCCCC
Q 007107 545 NILLDDELNPHLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT--GRKPLD 617 (618)
Q Consensus 545 NiLl~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt--g~~Pf~ 617 (618)
||++++++.+||+|||++......... ......++..|+|||++.+..++.++|||||||++|||++ |..||+
T Consensus 159 Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~ 234 (295)
T cd05097 159 NCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYS 234 (295)
T ss_pred hEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCc
Confidence 999999999999999998765332211 1222345778999999999999999999999999999998 677875
No 240
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.98 E-value=7.9e-32 Score=267.87 Aligned_cols=198 Identities=29% Similarity=0.428 Sum_probs=172.3
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc---cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL---SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
+|+..+.||+|++|.||+|... +++.|++|.+..... ..+..+.+.+|+++++.++|+||+++++++...+..++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 3667788999999999999876 789999998864332 233456789999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
+||+++++|.++++. ...+++..+..++.|++.|++|||+. +|+|+||+|+||++++++.+||+|||.+....
T Consensus 81 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~ 153 (258)
T cd06632 81 LELVPGGSLAKLLKK----YGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVV 153 (258)
T ss_pred EEecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 999999999999862 34588999999999999999999999 99999999999999999999999999987654
Q ss_pred CCCccccccccccccccCccccccCC-ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGI-YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... ......|+..|+|||.+.... ++.++|+||||+++|+|++|+.||.
T Consensus 154 ~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~ 203 (258)
T cd06632 154 EFS--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWS 203 (258)
T ss_pred ccc--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcc
Confidence 332 223456889999999997776 8999999999999999999999995
No 241
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.98 E-value=7.4e-32 Score=269.00 Aligned_cols=203 Identities=29% Similarity=0.424 Sum_probs=176.7
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee--CCeEEEEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE--HGQRLLVY 487 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 487 (618)
+|+..+.||+|+||.||++... +++.+|+|.+..........+++..|++.+++++||||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4777889999999999999764 58899999987665566667788999999999999999999998754 45679999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHh-----hcCCCCceecCCCCCCeeecCCCCcEEeecccc
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH-----EVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH-----~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~ 562 (618)
||+++++|.++++........+++..++.++.|++.||+||| +. +++|+||||+||++++++.+||+|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEeccccc
Confidence 999999999999765555678999999999999999999999 66 9999999999999999999999999999
Q ss_pred ccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 563 ALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
........ ......+++.|+|||++.+..++.++||||||+++|+|++|+.||+
T Consensus 158 ~~~~~~~~-~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 211 (265)
T cd08217 158 KILGHDSS-FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFT 211 (265)
T ss_pred ccccCCcc-cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCccc
Confidence 87654332 1233568999999999999889999999999999999999999986
No 242
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.98 E-value=5.9e-32 Score=274.91 Aligned_cols=199 Identities=27% Similarity=0.426 Sum_probs=174.2
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
...+|...+.||+|++|.||+|... +++.||+|.+...... ..+.+.+|+.+++.++|+||+++++++...+..++|
T Consensus 17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 94 (297)
T cd06656 17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 94 (297)
T ss_pred hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEe
Confidence 4467889999999999999999864 6899999998754322 346688899999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+++++|.+++. ...+++..+..++.|++.||.|||+. +++||||||+|||++.++.++|+|||++....
T Consensus 95 ~e~~~~~~L~~~~~-----~~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~ 166 (297)
T cd06656 95 MEYLAGGSLTDVVT-----ETCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 166 (297)
T ss_pred ecccCCCCHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEcc
Confidence 99999999999885 34578899999999999999999999 99999999999999999999999999987654
Q ss_pred CCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... ......+++.|+|||.+.+..++.++|||||||++|+|++|+.||.
T Consensus 167 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~ 216 (297)
T cd06656 167 PEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYL 216 (297)
T ss_pred CCcc-CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 3222 2233568899999999999889999999999999999999999985
No 243
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=1.2e-32 Score=277.30 Aligned_cols=205 Identities=23% Similarity=0.320 Sum_probs=176.5
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeE
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 483 (618)
+......|++.+.||+||.+.||++...+.+.||+|++.....+.+..+-|..|++.+.++ .|.+||++++|-..++.+
T Consensus 356 i~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~l 435 (677)
T KOG0596|consen 356 IKVKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYL 435 (677)
T ss_pred EEECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceE
Confidence 3445567999999999999999999999999999999988888888899999999999999 499999999999999999
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
|+|||| ...+|..+++... .......++.+..||+.++.++|+. ||||.||||.|+|+-. |.+||+|||+|.
T Consensus 436 YmvmE~-Gd~DL~kiL~k~~---~~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~ 507 (677)
T KOG0596|consen 436 YMVMEC-GDIDLNKILKKKK---SIDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIAN 507 (677)
T ss_pred EEEeec-ccccHHHHHHhcc---CCCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhc
Confidence 999996 4569999997432 2233237888999999999999999 9999999999999965 489999999998
Q ss_pred cCCCCC-ccccccccccccccCccccccCC-----------ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTE-RQVSTQMVGAFGYSAPEFALSGI-----------YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~-----------~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.+..+. .......+||+.||+||.+.... .++++||||+|||+|+|+.|+.||.
T Consensus 508 aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~ 573 (677)
T KOG0596|consen 508 AIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFG 573 (677)
T ss_pred ccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchH
Confidence 776554 34455679999999999995332 5678999999999999999999995
No 244
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.98 E-value=7.5e-32 Score=273.95 Aligned_cols=199 Identities=28% Similarity=0.448 Sum_probs=173.7
Q ss_pred hhcCCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
...+|+..+.||.|++|.||+|.. .+|+.|++|.+..... ...+.+.+|++.++.++||||+++++++...+..++|
T Consensus 17 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 94 (296)
T cd06655 17 PKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ--PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVV 94 (296)
T ss_pred CcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC--chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEE
Confidence 345688889999999999999975 4689999999865432 2356788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
+||+++++|.+++. ...+++.++..++.|++.|++|||+. +++||||||+||++++++.+||+|||++....
T Consensus 95 ~e~~~~~~L~~~~~-----~~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~ 166 (296)
T cd06655 95 MEYLAGGSLTDVVT-----ETCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQIT 166 (296)
T ss_pred EEecCCCcHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcc
Confidence 99999999999885 34589999999999999999999999 99999999999999999999999999987654
Q ss_pred CCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||.
T Consensus 167 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~ 216 (296)
T cd06655 167 PEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYL 216 (296)
T ss_pred cccc-cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 3322 2233568899999999998889999999999999999999999996
No 245
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.98 E-value=6.9e-32 Score=272.04 Aligned_cols=204 Identities=28% Similarity=0.495 Sum_probs=171.2
Q ss_pred hcCCcccceeccCccceEEEEEEc------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCe
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (618)
.++|...+.||+|+||.||++... ++..+++|.+.... ......+.+|++.++.++|+||+++++++...+.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQREAELLTVLQHQHIVRFYGVCTEGRP 81 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC--HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCc
Confidence 456777889999999999999642 35678999886443 3456689999999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhcccC-----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC
Q 007107 483 RLLVYEYVGNGNLHDMLHFADD-----------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~ 551 (618)
.+++|||+++++|.++++.... ....+++..+..++.|++.|++|||+. +++||||||+||+++++
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~ 158 (280)
T cd05092 82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQG 158 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCC
Confidence 9999999999999999864321 113578999999999999999999999 99999999999999999
Q ss_pred CCcEEeeccccccCCCCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 552 LNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 552 ~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
+.+||+|||++........ .......+++.|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 159 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 226 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWY 226 (280)
T ss_pred CCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCc
Confidence 9999999999875532221 11122345788999999999999999999999999999998 999984
No 246
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.98 E-value=1e-31 Score=268.96 Aligned_cols=197 Identities=26% Similarity=0.396 Sum_probs=159.4
Q ss_pred eeccCccceEEEEEEcCC---cEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCC
Q 007107 417 LIGEGSLGRVYRAEFANG---KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (618)
Q Consensus 417 ~Lg~G~~g~Vy~~~~~~g---~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 493 (618)
.||+|+||.||+|...++ ..+++|.+.... .....+.+.+|+..++.++||||+++++.+......++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA-SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC-ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 599999999999975543 345666665432 3345678999999999999999999999999999999999999999
Q ss_pred ChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC-ccc
Q 007107 494 NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE-RQV 572 (618)
Q Consensus 494 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~-~~~ 572 (618)
+|.++++.........++..+..++.|+++||+|||+. +++||||||+|||++.++.+||+|||++....... ...
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 99999975433334567778889999999999999998 99999999999999999999999999985432111 111
Q ss_pred cccccccccccCcccccc-------CCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 573 STQMVGAFGYSAPEFALS-------GIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.....++..|+|||++.. ..++.++||||||+++|||++ |..||+
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~ 210 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYS 210 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCC
Confidence 234567889999999853 245789999999999999997 577885
No 247
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.98 E-value=7.5e-32 Score=272.51 Aligned_cols=200 Identities=25% Similarity=0.383 Sum_probs=173.2
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+|+..+.||+|++|.||+|... +|+.|++|++............+.+|++++++++||||+++++++......++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4777889999999999999875 689999999876554444567789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+ +++|.+++... ...+++..+..++.|+++||+|||+. +++|+||||+||++++++.++|+|||++.......
T Consensus 81 ~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 81 M-PSDLSEVLRDE---ERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred c-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 9 99999988632 35689999999999999999999999 99999999999999999999999999998765433
Q ss_pred ccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
........|+..|+|||++.+. .++.++||||+|+++|||++|++||.
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~ 202 (286)
T cd07832 154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFP 202 (286)
T ss_pred CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcC
Confidence 2222345689999999998754 46899999999999999999988874
No 248
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.98 E-value=7.3e-32 Score=268.18 Aligned_cols=195 Identities=29% Similarity=0.457 Sum_probs=168.0
Q ss_pred ceeccCccceEEEEEEcC--C--cEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecC
Q 007107 416 FLIGEGSLGRVYRAEFAN--G--KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVG 491 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~~--g--~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 491 (618)
+.||+|++|.||+|.+.+ + ..+|+|.+...... ...+.+.+|+..+++++||||+++++++.. ...++|+||++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecC
Confidence 368999999999998753 3 36899999876543 566789999999999999999999999988 88999999999
Q ss_pred CCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCcc
Q 007107 492 NGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571 (618)
Q Consensus 492 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~ 571 (618)
+++|.+++..... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.........
T Consensus 79 ~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 79 LGSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred CCcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccc
Confidence 9999999864321 5689999999999999999999999 9999999999999999999999999999776443222
Q ss_pred c--cccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 572 V--STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 572 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
. .....++..|+|||++.+..++.++|||||||++|||++ |+.||+
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~ 202 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWA 202 (257)
T ss_pred eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 1 123457788999999999899999999999999999999 999985
No 249
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.98 E-value=2.7e-32 Score=275.58 Aligned_cols=198 Identities=24% Similarity=0.374 Sum_probs=167.6
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+|+..+.||+|+||.||+|... +|+.+|+|+++...........+.+|++.+++++||||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4777889999999999999875 589999999875433333345677899999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
++ ++|.+++.. ....+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 81 CD-QDLKKYFDS---CNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred CC-CCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 97 478777652 245689999999999999999999999 99999999999999999999999999997654322
Q ss_pred ccccccccccccccCccccccCC-ccccchhhhHHHHHHHHHhCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGI-YTVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~il~elltg~~Pf 616 (618)
.. .....+++.|+|||++.+.. ++.++|||||||++|||+||+.||
T Consensus 154 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~ 200 (284)
T cd07839 154 RC-YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 200 (284)
T ss_pred CC-cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCC
Confidence 21 22346788999999987644 789999999999999999999885
No 250
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.98 E-value=9.3e-32 Score=267.69 Aligned_cols=198 Identities=33% Similarity=0.543 Sum_probs=171.8
Q ss_pred ceeccCccceEEEEEEcC----CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecC
Q 007107 416 FLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVG 491 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 491 (618)
+.||+|+||.||+|.... +..+++|.++...... ..+.+.+|++.++.++|+||+++++++...+..++||||++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEecc
Confidence 368999999999998764 7889999997655333 46788999999999999999999999999999999999999
Q ss_pred CCChhhhhhcccCC-----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 492 NGNLHDMLHFADDS-----SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 492 ~gsL~~~l~~~~~~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
+++|.++++..... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||.+....
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVY 156 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccccccc
Confidence 99999999743211 36789999999999999999999998 99999999999999999999999999998765
Q ss_pred CCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 567 NTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 567 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.... .......++..|+|||.+....++.++||||+|+++|||++ |+.||+
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~ 209 (262)
T cd00192 157 DDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYP 209 (262)
T ss_pred cccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCC
Confidence 4321 11233467889999999998889999999999999999999 699986
No 251
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.98 E-value=7.4e-32 Score=270.90 Aligned_cols=197 Identities=30% Similarity=0.450 Sum_probs=173.8
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+|+..+.||.|++|.||+|... +++.+|+|.+.... .......+.+|+++++.++|+||+++++++.+....++|+||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 5778889999999999999876 58899999987543 233456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++++|.++++. ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||+++......
T Consensus 81 ~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 152 (274)
T cd06609 81 CGGGSCLDLLKP-----GKLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM 152 (274)
T ss_pred eCCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence 999999999862 3789999999999999999999998 99999999999999999999999999997765432
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. ......+++.|+|||++.+..++.++||||||+++|||+||+.||+
T Consensus 153 ~-~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~ 199 (274)
T cd06609 153 S-KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLS 199 (274)
T ss_pred c-ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 1 2233568889999999999889999999999999999999999985
No 252
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.98 E-value=8.3e-32 Score=272.30 Aligned_cols=200 Identities=26% Similarity=0.424 Sum_probs=170.4
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+|+..+.||+|+||.||++... +|+.||+|.++... .......+.+|++++++++||||+++++.+...+..++||||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 5778889999999999999876 68999999886542 333456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++++|.++++... ....+++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 156 (286)
T cd06622 81 MDAGSLDKLYAGGV-ATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS- 156 (286)
T ss_pred cCCCCHHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCC-
Confidence 99999999886321 2347899999999999999999999642 8999999999999999999999999998755322
Q ss_pred ccccccccccccccCccccccCC------ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGI------YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
......+++.|+|||.+.+.. ++.++|||||||++|||++|+.||.
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 208 (286)
T cd06622 157 --LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYP 208 (286)
T ss_pred --ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCC
Confidence 122346888999999986543 5889999999999999999999995
No 253
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.98 E-value=8.9e-32 Score=269.33 Aligned_cols=202 Identities=27% Similarity=0.480 Sum_probs=170.7
Q ss_pred hcCCcccceeccCccceEEEEEEcC-C---cEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFAN-G---KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~-g---~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
.++|+..+.||+|+||.||+|.... + ..+++|.++... .....+.+..|++++++++||||+++++++...+..+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM 82 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence 3467788899999999999998753 3 378999886543 3344667889999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||+++++|.++++. ....+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||++..
T Consensus 83 lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~ 156 (268)
T cd05063 83 IITEYMENGALDKYLRD---HDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRV 156 (268)
T ss_pred EEEEcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCcccee
Confidence 99999999999999863 235689999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCcccc--ccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 565 TPNTERQVS--TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
......... .....+..|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~ 212 (268)
T cd05063 157 LEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYW 212 (268)
T ss_pred cccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCC
Confidence 543322111 11223457999999998889999999999999999998 999984
No 254
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.98 E-value=6.9e-32 Score=281.44 Aligned_cols=190 Identities=21% Similarity=0.313 Sum_probs=162.6
Q ss_pred hcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
...|...+.||+|+||.||+|.... ++.||+|...... ...|+.++++++||||+++++++...+..++|+
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~--------~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 136 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT--------TLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL 136 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc--------cHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence 4579999999999999999998764 6789998754322 345888999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+. ++|.+++.. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 137 e~~~-~~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 209 (357)
T PHA03209 137 PHYS-SDLYTYLTK---RSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV 209 (357)
T ss_pred EccC-CcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCcccccccc
Confidence 9995 588888752 345789999999999999999999999 999999999999999999999999999875432
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKP 615 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~P 615 (618)
.. ......||+.|+|||++.+..++.++|||||||++|||+++..|
T Consensus 210 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~ 255 (357)
T PHA03209 210 AP--AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPST 255 (357)
T ss_pred Cc--ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCc
Confidence 21 12345799999999999999999999999999999999985544
No 255
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.98 E-value=8.5e-32 Score=276.06 Aligned_cols=207 Identities=28% Similarity=0.487 Sum_probs=171.7
Q ss_pred hhhcCCcccceeccCccceEEEEEEc--------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA--------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYC 477 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 477 (618)
....+|.+.+.||+|+||.||+|... .+..+|+|.++... .......+..|+++++++ +||||+++++++
T Consensus 9 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (314)
T cd05099 9 FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLISEMELMKLIGKHKNIINLLGVC 87 (314)
T ss_pred ccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence 34467888899999999999999642 24578999887543 334566788999999998 699999999999
Q ss_pred eeCCeEEEEEEecCCCChhhhhhcccC------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCC
Q 007107 478 AEHGQRLLVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSAN 545 (618)
Q Consensus 478 ~~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~N 545 (618)
...+..++||||+++|+|.++++.... ....+++.++..++.|++.||+|||+. +++||||||+|
T Consensus 88 ~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~N 164 (314)
T cd05099 88 TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARN 164 (314)
T ss_pred ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeecccccee
Confidence 999999999999999999999964321 124588999999999999999999998 99999999999
Q ss_pred eeecCCCCcEEeeccccccCCCCCccc-cccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 546 ILLDDELNPHLSDCGLAALTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 546 iLl~~~~~~kl~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
|++++++.+||+|||+++......... .....++..|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~ 238 (314)
T cd05099 165 VLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYP 238 (314)
T ss_pred EEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCC
Confidence 999999999999999997654322111 111234567999999999899999999999999999999 899885
No 256
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.98 E-value=1.2e-31 Score=267.81 Aligned_cols=201 Identities=27% Similarity=0.373 Sum_probs=170.5
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCccc---ccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC--CeE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAA---LSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQR 483 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 483 (618)
.+|...+.||+|+||.||+|... +++.||+|.+.... ...+....+.+|++.+++++|+||+++++++.+. +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 46888899999999999999765 58999999875321 1234456788999999999999999999998764 468
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++|+||+++++|.+++. ....+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||+++
T Consensus 82 ~~v~e~~~~~~L~~~~~----~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 154 (264)
T cd06653 82 SIFVEYMPGGSIKDQLK----AYGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154 (264)
T ss_pred EEEEEeCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccc
Confidence 89999999999999886 234578899999999999999999999 99999999999999999999999999997
Q ss_pred cCCCCC--ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTE--RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
...... ........|+..|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 210 (264)
T cd06653 155 RIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWA 210 (264)
T ss_pred ccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 653211 111123568899999999998889999999999999999999999996
No 257
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.98 E-value=5.9e-32 Score=272.51 Aligned_cols=200 Identities=28% Similarity=0.426 Sum_probs=172.4
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.++|+..+.||+|++|.||+|... +++.+|+|.+... .....+.+..|++++++++||||+++++++...+..++||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILI 81 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEe
Confidence 456888899999999999999875 5889999998643 2334567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++++|.+++.. ....+++..+..++.|++.||.|||+. +|+|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~ 155 (280)
T cd06611 82 EFCDGGALDSIMLE---LERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKS 155 (280)
T ss_pred eccCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhcc
Confidence 99999999998863 234689999999999999999999999 999999999999999999999999999865533
Q ss_pred CCccccccccccccccCccccc-----cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... ......+++.|+|||++. ...++.++||||||+++|||++|+.||.
T Consensus 156 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~ 209 (280)
T cd06611 156 TLQ-KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHH 209 (280)
T ss_pred ccc-ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcc
Confidence 221 223456899999999985 3446789999999999999999999986
No 258
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.98 E-value=4.8e-32 Score=269.71 Aligned_cols=198 Identities=28% Similarity=0.397 Sum_probs=174.7
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
+|+..+.||+|+||.||+|... +++.||+|.+..... .....+.+.+|++.+++++||||+++++.+.+....++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4778889999999999999876 589999999875433 22456788999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+.+++|.+++.. ...+++..+..++.|+++||+|||+. +++|+||+|+||++++++.++|+|||.+......
T Consensus 81 ~~~~~~L~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 81 LLLGGDLRYHLSQ----KVKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD 153 (258)
T ss_pred CCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence 9999999999862 35789999999999999999999998 9999999999999999999999999998765433
Q ss_pred CccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. ......|+..|+|||.+.+..++.++|+||||+++|+|++|+.||+
T Consensus 154 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~ 200 (258)
T cd05578 154 T--LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYR 200 (258)
T ss_pred c--cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCC
Confidence 2 1233568889999999998889999999999999999999999986
No 259
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.98 E-value=1.1e-31 Score=274.03 Aligned_cols=201 Identities=26% Similarity=0.372 Sum_probs=171.1
Q ss_pred cCCcccceeccCccceEEEEEEcC-CcEEEEEEcCccccc-HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
++|+..+.||+|+||.||++.... ++.|++|.+...... ......+.+|+++++.++||||+++++.+...+..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 367888999999999999998764 789999998754322 234567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++++|.++++. .+.+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~ 153 (305)
T cd05609 81 EYVEGGDCATLLKN----IGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM 153 (305)
T ss_pred ecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence 99999999999962 35689999999999999999999998 999999999999999999999999998863210
Q ss_pred CC--------------ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TE--------------RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. ........++..|+|||.+.+..++.++|+||||+++|||++|+.||.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~ 217 (305)
T cd05609 154 SLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFF 217 (305)
T ss_pred CccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 00 001112457889999999998889999999999999999999999985
No 260
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.98 E-value=1.1e-31 Score=266.98 Aligned_cols=193 Identities=27% Similarity=0.424 Sum_probs=163.8
Q ss_pred ceeccCccceEEEEEEcC----CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecC
Q 007107 416 FLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVG 491 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 491 (618)
+.||+|+||.||+|.+.. +..+|+|.+...... ...+++.+|+++++.+.||||+++++++. .+..++||||++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCC
Confidence 369999999999997543 268999999865543 45677899999999999999999999876 456899999999
Q ss_pred CCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCcc
Q 007107 492 NGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571 (618)
Q Consensus 492 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~ 571 (618)
+|+|.+++.. ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++........
T Consensus 79 ~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 79 LGPLLKYLKK----RREIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred CCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence 9999999963 33689999999999999999999998 9999999999999999999999999999766433322
Q ss_pred ccc--cccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 572 VST--QMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 572 ~~~--~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
... ...++..|+|||.+.+..++.++||||||+++|||++ |+.||+
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~ 200 (257)
T cd05060 152 YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYG 200 (257)
T ss_pred cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcc
Confidence 211 1223567999999999999999999999999999998 999986
No 261
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.98 E-value=1.2e-31 Score=267.88 Aligned_cols=203 Identities=29% Similarity=0.432 Sum_probs=175.3
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
++|+..+.||+|+||+||+|... ++..+++|++....... ..+.+.+|++.++.++|+||+++++.+...+..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 79 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMP 79 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEe
Confidence 46888899999999999999865 57889999987544333 56788999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
++++++|.++++... ....+++..+..++.|++.|++|||+. +|+||||+|+||++++++.+||+|||++......
T Consensus 80 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 80 YLSGGSLLDIMKSSY-PRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADG 155 (267)
T ss_pred ccCCCcHHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccC
Confidence 999999999996422 125689999999999999999999998 9999999999999999999999999998765433
Q ss_pred Ccc---ccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQ---VSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... ......|+..|+|||++... .++.++|+|||||++|||++|+.||.
T Consensus 156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~ 208 (267)
T cd06610 156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYS 208 (267)
T ss_pred ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCcc
Confidence 222 22334688999999999877 78999999999999999999999985
No 262
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.98 E-value=1.1e-31 Score=272.86 Aligned_cols=205 Identities=29% Similarity=0.465 Sum_probs=172.8
Q ss_pred hcCCcccceeccCccceEEEEEEcC-----------------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCccc
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFAN-----------------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~-----------------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 471 (618)
..+|+..+.||+|+||.||+|...+ +..||+|.+.... .....+.+.+|++++++++||||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhcCCCCEe
Confidence 4578889999999999999987653 2458999987543 234567889999999999999999
Q ss_pred ccceEEeeCCeEEEEEEecCCCChhhhhhcccC-------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCC
Q 007107 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADD-------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSA 544 (618)
Q Consensus 472 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~ 544 (618)
++++++...+..++||||+++++|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~ 159 (296)
T cd05051 83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATR 159 (296)
T ss_pred EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchh
Confidence 999999999999999999999999999864331 123689999999999999999999998 9999999999
Q ss_pred CeeecCCCCcEEeeccccccCCCCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh--CCCCCC
Q 007107 545 NILLDDELNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT--GRKPLD 617 (618)
Q Consensus 545 NiLl~~~~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt--g~~Pf~ 617 (618)
||++++++.++|+|||+++....... .......+++.|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 235 (296)
T cd05051 160 NCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYE 235 (296)
T ss_pred ceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCC
Confidence 99999999999999999876533221 12223456788999999998889999999999999999998 778875
No 263
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.98 E-value=1.2e-31 Score=268.76 Aligned_cols=201 Identities=28% Similarity=0.412 Sum_probs=168.6
Q ss_pred hcCCcccceeccCccceEEEEEEcCC----cEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFANG----KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~g----~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
.++|...+.||+|+||.||+|.+.+. ..+++|...... .....+.+.+|+.++++++||||+++++++.+ +..+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~ 82 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVW 82 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcE
Confidence 34677888999999999999976532 468889886543 23455688999999999999999999998875 4678
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||+++|+|.+++.. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 83 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~ 156 (270)
T cd05056 83 IVMELAPLGELRSYLQV---NKYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRY 156 (270)
T ss_pred EEEEcCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeee
Confidence 99999999999999963 233589999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.............++..|+|||.+....++.++||||||+++|||++ |+.||.
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~ 210 (270)
T cd05056 157 LEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQ 210 (270)
T ss_pred cccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCC
Confidence 54432222223345568999999988889999999999999999996 999985
No 264
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2.8e-33 Score=284.50 Aligned_cols=200 Identities=27% Similarity=0.452 Sum_probs=171.5
Q ss_pred hcCCcccceeccCccceEEEEEEcCCcEE-EEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIM-AVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~v-avK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.+.|.++..||.|+||.||+|..++.... |.|++... +.++..+|+-|++++..+.||+||++++.|..++.+++..
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk--seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwili 108 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK--SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILI 108 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc--chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEE
Confidence 34567788899999999999988765544 55555432 4556788999999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
|||+||....++- .-+..+.+.++..+++|++.||.|||++ +|||||||+.|||++-+|.++|+|||.+.....
T Consensus 109 EFC~GGAVDaiml---EL~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~ 182 (1187)
T KOG0579|consen 109 EFCGGGAVDAIML---ELGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS 182 (1187)
T ss_pred eecCCchHhHHHH---HhccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchh
Confidence 9999999988775 2467899999999999999999999999 999999999999999999999999999865432
Q ss_pred CCccccccccccccccCccccc-----cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. ......++|||+|||||+.+ ..+|+.++||||||+.|.||.-+.+|-.
T Consensus 183 t-~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHh 236 (1187)
T KOG0579|consen 183 T-RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHH 236 (1187)
T ss_pred H-HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcc
Confidence 2 23345689999999999985 4579999999999999999999999853
No 265
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.98 E-value=1e-31 Score=278.75 Aligned_cols=206 Identities=26% Similarity=0.451 Sum_probs=168.9
Q ss_pred hhcCCcccceeccCccceEEEEEE------cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeC
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEF------ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEH 480 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 480 (618)
..++|...+.||+|+||.||+|.+ .+++.||||+++... .......+.+|+.++.++ +||||+++++++...
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKP 83 (343)
T ss_pred chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC-ChHHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence 346789999999999999999963 347889999997543 233456788999999999 689999999988654
Q ss_pred -CeEEEEEEecCCCChhhhhhcccC-------------------------------------------------------
Q 007107 481 -GQRLLVYEYVGNGNLHDMLHFADD------------------------------------------------------- 504 (618)
Q Consensus 481 -~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------- 504 (618)
...++||||+++|+|.++++....
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 467899999999999999864221
Q ss_pred --------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCcc-cccc
Q 007107 505 --------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ-VSTQ 575 (618)
Q Consensus 505 --------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~-~~~~ 575 (618)
....+++..+..++.|+++||+|||++ +|+||||||+||++++++.+||+|||++......... ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCC
Confidence 012467888899999999999999999 9999999999999999999999999998765322211 1122
Q ss_pred ccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 576 MVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 576 ~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
..++..|+|||.+.+..++.++||||||+++|||++ |..||.
T Consensus 241 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 283 (343)
T cd05103 241 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 283 (343)
T ss_pred CCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 345678999999999999999999999999999997 999985
No 266
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.98 E-value=1.4e-31 Score=268.24 Aligned_cols=195 Identities=30% Similarity=0.507 Sum_probs=162.0
Q ss_pred eeccCccceEEEEEEcC-Cc--EEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEEEEEecCC
Q 007107 417 LIGEGSLGRVYRAEFAN-GK--IMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (618)
Q Consensus 417 ~Lg~G~~g~Vy~~~~~~-g~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 492 (618)
.||+|+||.||+|...+ +. .+++|.++... .......+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccC-CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 68999999999998764 43 46888876432 334456788999999999 799999999999999999999999999
Q ss_pred CChhhhhhcccC------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecc
Q 007107 493 GNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (618)
Q Consensus 493 gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfg 560 (618)
|+|.++++..+. ....+++.++..++.|++.||+|||+. +++||||||+||++++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence 999999864321 123578999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
++........ ......+..|+|||++....++.++||||||+++|||++ |+.||.
T Consensus 158 l~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~ 213 (270)
T cd05047 158 LSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 213 (270)
T ss_pred Cccccchhhh--ccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCcc
Confidence 9853321111 111234567999999988889999999999999999997 999985
No 267
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.98 E-value=1.6e-31 Score=265.52 Aligned_cols=196 Identities=31% Similarity=0.522 Sum_probs=171.6
Q ss_pred hcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
.++|+..+.||+|+||.||+|... |+.||+|.+..... ..+++.+|+.++++++|+||+++++++...+..++|||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 80 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTE 80 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEE
Confidence 457788889999999999999875 78899999975532 46778999999999999999999999999899999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+++++|.++++.. ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||.++.....
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 81 YMAKGSLVDYLRSR--GRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred ecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccc
Confidence 99999999998632 223689999999999999999999999 9999999999999999999999999999766322
Q ss_pred CccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.. ...++..|+|||++....++.++||||||+++|||++ |+.||.
T Consensus 156 ~~----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~ 201 (256)
T cd05039 156 QD----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP 201 (256)
T ss_pred cc----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCC
Confidence 21 2334668999999998899999999999999999997 999985
No 268
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.98 E-value=1.7e-31 Score=268.72 Aligned_cols=198 Identities=26% Similarity=0.439 Sum_probs=172.9
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
..|+..+.||+|+||.||+|... +++.||+|.+.... .......+.+|+++++++.||||+++++++.+....++|||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIME 82 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc-cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEe
Confidence 35677788999999999999875 58899999887543 23456788999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+++++|.++++ ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~i~-----~~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06640 83 YLGGGSALDLLR-----AGPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred cCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCC
Confidence 999999999885 24678889999999999999999998 9999999999999999999999999999765433
Q ss_pred CccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. .......++..|+|||++.+..++.++|+|||||++|||+||+.||.
T Consensus 155 ~-~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~ 202 (277)
T cd06640 155 Q-IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNS 202 (277)
T ss_pred c-cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCC
Confidence 2 12233468889999999988889999999999999999999999986
No 269
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.98 E-value=1.5e-31 Score=268.78 Aligned_cols=204 Identities=25% Similarity=0.406 Sum_probs=172.2
Q ss_pred cCCcccceeccCccceEEEEEEc------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
++|+..+.||+|+||.||+|..+ +.+.+++|.+.... .....+.+.+|++++++++|+||+++++++.+.+..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 83 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPH 83 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcc
Confidence 56888889999999999999864 24678999886433 222456789999999999999999999999998999
Q ss_pred EEEEEecCCCChhhhhhcccCC-----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEee
Q 007107 484 LLVYEYVGNGNLHDMLHFADDS-----SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSD 558 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~-----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~D 558 (618)
++||||+++|+|.++++..... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.++++|
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEcc
Confidence 9999999999999999743321 12689999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 559 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
||++...............++..|+|||.+.+..++.++||||||+++|+|++ |..||.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~ 220 (275)
T cd05046 161 LSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFY 220 (275)
T ss_pred cccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 99986543332223334467788999999988889999999999999999999 888885
No 270
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.98 E-value=8.7e-32 Score=270.83 Aligned_cols=197 Identities=27% Similarity=0.449 Sum_probs=171.2
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
.|+..+.||+|+||.||+|... +++.||+|.+..... ....+.+.+|++++++++||||+++++++...+..++||||
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc-hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence 4666778999999999999765 578899998874432 23456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++++|.++++ ...+++..+..++.|+++|++|||++ +++|+||+|+||++++++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06642 84 LGGGSALDLLK-----PGPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred cCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcc
Confidence 99999999885 35688999999999999999999998 99999999999999999999999999987654322
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.......|+..|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~ 202 (277)
T cd06642 156 -IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNS 202 (277)
T ss_pred -hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCc
Confidence 12223468889999999999889999999999999999999999985
No 271
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.98 E-value=1.8e-31 Score=268.81 Aligned_cols=201 Identities=28% Similarity=0.471 Sum_probs=170.0
Q ss_pred hcCCcccceeccCccceEEEEEEcC-Cc----EEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFAN-GK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
..+|+..+.||+|+||.||+|.+.+ |+ .+|+|...... .......+.+|+..+++++||||+++++++.. +..
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 83 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET-SPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQV 83 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cce
Confidence 3567888899999999999998653 33 58999886543 24455778899999999999999999999987 788
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++||||+++|+|.++++. ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||.++
T Consensus 84 ~~v~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~ 157 (279)
T cd05057 84 QLITQLMPLGCLLDYVRN---HKDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAK 157 (279)
T ss_pred EEEEecCCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccc
Confidence 999999999999999863 234589999999999999999999998 99999999999999999999999999998
Q ss_pred cCCCCCcccc-ccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 564 LTPNTERQVS-TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.......... ....++..|+|||.+....++.++||||||+++||+++ |+.||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 213 (279)
T cd05057 158 LLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYE 213 (279)
T ss_pred cccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCC
Confidence 6653332221 11234568999999988889999999999999999999 999986
No 272
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.98 E-value=8.5e-32 Score=271.96 Aligned_cols=198 Identities=27% Similarity=0.427 Sum_probs=172.3
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
++|+..+.||+|+||.||++... +|+.||+|++.... .......+.+|+++++.++||||+++++++...+..++|||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME 83 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence 56778889999999999999765 58899999876443 23345778999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+++++|.++++. .+.+++..+..++.+++.||.|||+.+ +++||||||+||++++++.++|+|||++......
T Consensus 84 ~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 84 FMDCGSLDRIYKK----GGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred cCCCCCHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 9999999998863 356899999999999999999999742 8999999999999999999999999998654222
Q ss_pred CccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. .....|+..|+|||++.+..++.++|||||||++|||+||+.||+
T Consensus 158 ~---~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~ 203 (284)
T cd06620 158 I---ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFA 203 (284)
T ss_pred c---cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCc
Confidence 1 123578999999999988889999999999999999999999996
No 273
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.98 E-value=1.7e-31 Score=265.36 Aligned_cols=201 Identities=26% Similarity=0.426 Sum_probs=174.9
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+|+..+.||+|+||.||++... +|+.||+|++............+.+|++++++++||||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4778889999999999999765 589999999876544555667889999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+.+++|.++++.. ....+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 81 CEGGDLYKKINAQ--RGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred CCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 9999999988632 234578899999999999999999998 99999999999999999999999999997654322
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. ......|++.|+|||++.+..++.++|||||||++|+|++|+.||.
T Consensus 156 ~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~ 202 (256)
T cd08218 156 E-LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFE 202 (256)
T ss_pred h-hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCcc
Confidence 1 1223468889999999998889999999999999999999999985
No 274
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.98 E-value=1.9e-31 Score=264.20 Aligned_cols=195 Identities=28% Similarity=0.458 Sum_probs=167.5
Q ss_pred ceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCCCh
Q 007107 416 FLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNL 495 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 495 (618)
+.||+|++|.||++...+++.|++|.+...... .....+..|++++++++|+||+++++++...+..++||||+++++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence 368999999999998877999999998765433 4567789999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCcccc-c
Q 007107 496 HDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVS-T 574 (618)
Q Consensus 496 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~~-~ 574 (618)
.++++. ....+++..+..++.+++.|++|||++ +++||||||+||+++.++.+||+|||++........... .
T Consensus 80 ~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (251)
T cd05041 80 LTFLRK---KKNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDG 153 (251)
T ss_pred HHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccc
Confidence 999863 234678899999999999999999999 999999999999999999999999999875542211111 1
Q ss_pred cccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 575 QMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 575 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
...++..|+|||.+.+..++.++||||||+++|||+| |+.||.
T Consensus 154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~ 197 (251)
T cd05041 154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYP 197 (251)
T ss_pred cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCc
Confidence 1234567999999998899999999999999999999 888885
No 275
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.98 E-value=1.6e-31 Score=267.47 Aligned_cols=200 Identities=26% Similarity=0.445 Sum_probs=171.3
Q ss_pred CCcccceeccCccceEEEEEE-cCCcEEEEEEcCccccc----HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALS----LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
+|+..+.||+|++|.||+|.. .+++.+|+|.+...... ....+.+..|++.+++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 467788999999999999976 46899999998643321 2235678999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCC-CcEEeecccccc
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL-NPHLSDCGLAAL 564 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~-~~kl~Dfgl~~~ 564 (618)
|+||+++++|.+++.. ...+++..+..++.|++.||+|||++ +++|+||+|+||+++.++ .+||+|||.+..
T Consensus 81 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~ 153 (268)
T cd06630 81 FVEWMAGGSVSHLLSK----YGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAAR 153 (268)
T ss_pred EEeccCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence 9999999999999863 34688999999999999999999999 999999999999998765 599999999876
Q ss_pred CCCCCc---cccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 565 TPNTER---QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 565 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
...... .......|+..|+|||.+.+..++.++||||+|+++|+|++|+.||.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~ 209 (268)
T cd06630 154 LAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWN 209 (268)
T ss_pred cccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCC
Confidence 543321 11223568899999999988889999999999999999999999985
No 276
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.98 E-value=1.9e-31 Score=269.47 Aligned_cols=199 Identities=28% Similarity=0.441 Sum_probs=166.8
Q ss_pred cCCcccceeccCccceEEEEEEc-----CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC--Ce
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQ 482 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~ 482 (618)
.+|...+.||+|+||.||++... +++.||+|+++... ....+.+.+|++++++++||||+++++++... ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST--AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 81 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence 46788889999999999999743 57899999987543 34456788999999999999999999987543 46
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccc
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~ 562 (618)
.++|+||+++++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~---~~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~ 155 (284)
T cd05081 82 LRLVMEYLPYGSLRDYLQK---HRERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLT 155 (284)
T ss_pred eEEEEEecCCCCHHHHHHh---cCcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccc
Confidence 8999999999999999863 234689999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCccc--cccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCC
Q 007107 563 ALTPNTERQV--STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 563 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf 616 (618)
+......... .....++..|+|||++.+..++.++||||||+++|||++|..|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~ 211 (284)
T cd05081 156 KVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKS 211 (284)
T ss_pred ccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcC
Confidence 8765432211 11123445699999999889999999999999999999987664
No 277
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.98 E-value=1.7e-31 Score=265.51 Aligned_cols=194 Identities=32% Similarity=0.518 Sum_probs=166.1
Q ss_pred cCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEe-eCCeEEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCA-EHGQRLLVYE 488 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e 488 (618)
++|...+.||+|+||.||++... |..+++|.++... ..+.+.+|+.++++++|+|++++++++. ..+..++|||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 80 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEE
Confidence 46788889999999999999775 7889999886432 3457889999999999999999999764 4567899999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+++++|.++++.. ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||++......
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 81 YMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred CCCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 99999999998632 233588999999999999999999998 9999999999999999999999999998754332
Q ss_pred CccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
. ....++..|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 156 ~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~ 201 (256)
T cd05082 156 Q----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP 201 (256)
T ss_pred C----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 2 12344568999999998889999999999999999998 999985
No 278
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.98 E-value=9.1e-32 Score=272.75 Aligned_cols=196 Identities=30% Similarity=0.432 Sum_probs=169.6
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
.|.....||+|+||.||++... +++.||+|++.... ....+.+.+|+..++.++|+||+++++.+...+..++||||
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~ 100 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEF 100 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeC
Confidence 3444567999999999999765 58899999986433 33456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++++|.+++. .+.+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 101 ~~~~~L~~~~~-----~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~ 172 (292)
T cd06658 101 LEGGALTDIVT-----HTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV 172 (292)
T ss_pred CCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhccccc
Confidence 99999999884 34588999999999999999999999 99999999999999999999999999987554322
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. ......|+..|+|||.+.+..++.++||||||+++|||++|+.||.
T Consensus 173 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~ 219 (292)
T cd06658 173 P-KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYF 219 (292)
T ss_pred c-cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 2 2233568999999999988889999999999999999999999985
No 279
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.97 E-value=1.5e-31 Score=270.23 Aligned_cols=200 Identities=25% Similarity=0.433 Sum_probs=168.8
Q ss_pred cCCcccceeccCccceEEEEEE-----cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC--Ce
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEF-----ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQ 482 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~ 482 (618)
+.|...+.||+|+||.||++.+ .+++.||+|.++... .......+.+|++++++++||||+++++++... ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 3467788999999999999974 247889999987543 334456789999999999999999999998775 56
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccc
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~ 562 (618)
.++||||+++++|.+++.. ....+++.++..++.|++.||+|||++ +++||||||+||++++++.+||+|||++
T Consensus 83 ~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~ 156 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPR---NKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 156 (284)
T ss_pred eEEEEEccCCCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccc
Confidence 8999999999999999863 234689999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCcc--ccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCC
Q 007107 563 ALTPNTERQ--VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 563 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf 616 (618)
+........ ......++..|+|||++.+..++.++||||||+++|||+|++.|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~ 212 (284)
T cd05079 157 KAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSE 212 (284)
T ss_pred cccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCC
Confidence 765433221 122345677899999999888999999999999999999987664
No 280
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.97 E-value=1.3e-31 Score=271.13 Aligned_cols=206 Identities=28% Similarity=0.469 Sum_probs=172.4
Q ss_pred hhcCCcccceeccCccceEEEEEEc------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (618)
..++|+..+.||+|+||.||+|... ++..||+|.+.... ......++.+|++++++++||||+++++++...+
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc-CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence 3567888999999999999999764 46789999987543 3345577899999999999999999999999999
Q ss_pred eEEEEEEecCCCChhhhhhccc------------------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCC
Q 007107 482 QRLLVYEYVGNGNLHDMLHFAD------------------DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKS 543 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~------------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp 543 (618)
..++|+||+++|+|.++++... .....+++..++.++.|++.||+|||+. +++||||||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p 158 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLAT 158 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccH
Confidence 9999999999999999986321 1123478889999999999999999998 999999999
Q ss_pred CCeeecCCCCcEEeeccccccCCCCCcc-ccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 544 ANILLDDELNPHLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 544 ~NiLl~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
+||++++++.+||+|||++......... ......++..|+|||.+.+..++.++|||||||++|||++ |..||.
T Consensus 159 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~ 234 (288)
T cd05050 159 RNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYY 234 (288)
T ss_pred hheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999998754322211 1122345678999999998999999999999999999998 888874
No 281
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=2.2e-31 Score=269.35 Aligned_cols=201 Identities=25% Similarity=0.378 Sum_probs=172.3
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC--CeEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQRLLV 486 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 486 (618)
++|+..+.||.|++|.||++... +++.+|+|.+..... ......+.+|++.+++++||||+++++++... +..++|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN-PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc-hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 35778889999999999999875 588899998875432 24567789999999999999999999988653 478999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+++++|.+++.........+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||++....
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~ 156 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELV 156 (287)
T ss_pred EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence 999999999998765444456789999999999999999999999 99999999999999999999999999986543
Q ss_pred CCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... ....++..|+|||.+.+..++.++||||||+++|||++|+.||+
T Consensus 157 ~~~~---~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 204 (287)
T cd06621 157 NSLA---GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFP 204 (287)
T ss_pred cccc---ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 2211 23457889999999999999999999999999999999999996
No 282
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.97 E-value=1.2e-31 Score=271.76 Aligned_cols=199 Identities=25% Similarity=0.405 Sum_probs=167.7
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
++|+..+.||+|++|.||+|..+ +++.||+|.+...... .....+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE-GAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc-CCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 57888899999999999999876 5899999998654322 123446789999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+++ +|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 84 ~~~~-~L~~~~~~---~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 156 (291)
T cd07844 84 YLDT-DLKQYMDD---CGGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVP 156 (291)
T ss_pred cCCC-CHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCC
Confidence 9985 89988863 234688999999999999999999999 9999999999999999999999999998654322
Q ss_pred CccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... .....++..|+|||++.+ ..++.++||||+|+++|||++|+.||.
T Consensus 157 ~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~ 205 (291)
T cd07844 157 SKT-YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFP 205 (291)
T ss_pred Ccc-ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 111 122356889999999876 458899999999999999999999995
No 283
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=9.5e-33 Score=268.34 Aligned_cols=203 Identities=24% Similarity=0.372 Sum_probs=170.6
Q ss_pred hhcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCccccc-HHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 484 (618)
...+|....+||+|+||.|.+|+.+. .+.||||++++...- ....+--+.|-+++..- +-|.+++++..+..-+++|
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLy 426 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLY 426 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhee
Confidence 34577888899999999999997764 677999999876542 22222234455555544 5788999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||+.+|+|--.+++ -+.+.+..+.-++..|+-||-+||++ +||.||||.+|||++.+|++||+|||++..
T Consensus 427 FVMEyvnGGDLMyhiQQ----~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKE 499 (683)
T KOG0696|consen 427 FVMEYVNGGDLMYHIQQ----VGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 499 (683)
T ss_pred eEEEEecCchhhhHHHH----hcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecccccc
Confidence 99999999999888874 46677888899999999999999999 999999999999999999999999999975
Q ss_pred CCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
..- +......++|||.|+|||++...+|+.++|+||+||+||||+.|++||+.
T Consensus 500 ni~-~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdG 552 (683)
T KOG0696|consen 500 NIF-DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG 552 (683)
T ss_pred ccc-CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCC
Confidence 432 23334568999999999999999999999999999999999999999973
No 284
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.97 E-value=9.1e-32 Score=268.72 Aligned_cols=197 Identities=29% Similarity=0.444 Sum_probs=173.0
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+|+..+.||+|++|.||++... +++.+++|++..... .....++.+|++.+++++||||+++++.+...+..++++||
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 5677788999999999999876 588999999876532 34567788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE-VCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
+++++|.+++... ...+++..+..++.|++.|++|||+ . +++|+||||+||++++++.++|+|||.+......
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 81 MDGGSLDKILKEV---QGRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred cCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence 9999999998642 2678899999999999999999999 7 9999999999999999999999999998655322
Q ss_pred CccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. ....++..|+|||.+.+..++.++||||||+++|+|++|+.||.
T Consensus 155 ~~---~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~ 200 (265)
T cd06605 155 LA---KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYP 200 (265)
T ss_pred Hh---hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 11 12568889999999999999999999999999999999999985
No 285
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.97 E-value=1.5e-31 Score=271.14 Aligned_cols=200 Identities=24% Similarity=0.349 Sum_probs=167.1
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.++|...+.||+|+||.||+|... +|+.||+|++..... ......+.+|++.++.++|+||+++++++...+..++|+
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE-EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc-CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 467888999999999999999765 588999999865432 222345678999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+. +++.+++.. ....+.+..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 83 e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 155 (291)
T cd07870 83 EYMH-TDLAQYMIQ---HPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSI 155 (291)
T ss_pred eccc-CCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCC
Confidence 9996 677776642 234577888899999999999999999 999999999999999999999999999875432
Q ss_pred CCccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... .....+++.|+|||++.+. .++.++||||||+++|||++|+.||+
T Consensus 156 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~ 205 (291)
T cd07870 156 PSQT-YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFP 205 (291)
T ss_pred CCCC-CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 2211 2234578999999998764 57889999999999999999999996
No 286
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.97 E-value=1.9e-31 Score=271.37 Aligned_cols=199 Identities=30% Similarity=0.407 Sum_probs=169.3
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCccccc---HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS---LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
+|+..+.||+|++|.||+|... +|+.|++|++...... ......+..|++.+++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 3677889999999999999865 5899999999765433 22345677899999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+ +++|.++++.. ...+++..+..++.|+++||+|||+. +|+|+||||+||+++.++.+||+|||++....
T Consensus 81 ~e~~-~~~L~~~i~~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 153 (298)
T cd07841 81 FEFM-ETDLEKVIKDK---SIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFG 153 (298)
T ss_pred Eccc-CCCHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeecc
Confidence 9999 88999998632 23689999999999999999999999 99999999999999999999999999997665
Q ss_pred CCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
...... ....+++.|+|||.+.+ ..++.++|||||||++|||++|..||.
T Consensus 154 ~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~ 204 (298)
T cd07841 154 SPNRKM-THQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLP 204 (298)
T ss_pred CCCccc-cccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCcccc
Confidence 432221 22356788999999865 457899999999999999999988875
No 287
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.97 E-value=2.2e-31 Score=265.54 Aligned_cols=188 Identities=30% Similarity=0.409 Sum_probs=157.6
Q ss_pred eeccCccceEEEEEEcC-------------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 417 LIGEGSLGRVYRAEFAN-------------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 417 ~Lg~G~~g~Vy~~~~~~-------------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
.||+|+||.||+|.+.+ ...+++|.+.... ......+.+|+.+++.++||||+++++++......
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~ 79 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVEN 79 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 58999999999997532 2358888876433 23445788899999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCC-------cEE
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN-------PHL 556 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~-------~kl 556 (618)
++||||+++|+|..+++. ....+++..+..++.||++||+|||++ +|+||||||+|||++.++. +|+
T Consensus 80 ~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHR---KSDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred EEEEecccCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEe
Confidence 999999999999888752 235689999999999999999999999 9999999999999986654 899
Q ss_pred eeccccccCCCCCccccccccccccccCccccc-cCCccccchhhhHHHHHHHHH-hCCCCCC
Q 007107 557 SDCGLAALTPNTERQVSTQMVGAFGYSAPEFAL-SGIYTVKSDVYSFGVVMLELL-TGRKPLD 617 (618)
Q Consensus 557 ~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlG~il~ell-tg~~Pf~ 617 (618)
+|||++...... ....++..|+|||.+. +..++.++|||||||++|||+ +|+.||.
T Consensus 154 ~d~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~ 211 (262)
T cd05077 154 SDPGIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLK 211 (262)
T ss_pred CCCCCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 999998654322 2245788899999987 466899999999999999997 5888875
No 288
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.97 E-value=2.8e-31 Score=263.65 Aligned_cols=200 Identities=23% Similarity=0.399 Sum_probs=173.9
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+|+..+.||+|++|.||++... +++.+|+|.+............+.+|++++++++||||+++++.+...+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4778889999999999999765 588999999876655555677899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC-CCcEEeeccccccCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE-LNPHLSDCGLAALTPNT 568 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~-~~~kl~Dfgl~~~~~~~ 568 (618)
+++++|.++++.. ....+++..+.+++.|++.|++|||++ +++|+||+|+||+++++ +.+||+|||.+......
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 81 APGGTLAEYIQKR--CNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred CCCCCHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 9999999999632 234588999999999999999999999 99999999999999855 45799999999766433
Q ss_pred CccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. .....|+..|+|||.+.+..++.++||||||+++|+|++|+.||+
T Consensus 156 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~ 202 (256)
T cd08220 156 SK--AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFE 202 (256)
T ss_pred cc--ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcc
Confidence 21 223568889999999998889999999999999999999999986
No 289
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=1.9e-31 Score=275.86 Aligned_cols=206 Identities=29% Similarity=0.485 Sum_probs=171.2
Q ss_pred hhcCCcccceeccCccceEEEEEEcC--------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEe
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN--------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCA 478 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 478 (618)
...+|...+.||+|+||.||+|...+ +..+|+|.++... .....+.+.+|+++++++ +||||+++++++.
T Consensus 10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (334)
T cd05100 10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA-TDKDLSDLVSEMEMMKMIGKHKNIINLLGACT 88 (334)
T ss_pred CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc
Confidence 34568888999999999999997532 2368999887432 334567889999999999 7999999999999
Q ss_pred eCCeEEEEEEecCCCChhhhhhcccC------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCe
Q 007107 479 EHGQRLLVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANI 546 (618)
Q Consensus 479 ~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Ni 546 (618)
..+..++++||+++|+|.+++..... ....+++.++..++.|++.||+|||++ +|+||||||+||
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni 165 (334)
T cd05100 89 QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNV 165 (334)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceE
Confidence 99999999999999999999864321 234578899999999999999999998 999999999999
Q ss_pred eecCCCCcEEeeccccccCCCCCccc-cccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 547 LLDDELNPHLSDCGLAALTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 547 Ll~~~~~~kl~Dfgl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
++++++.+||+|||+++......... .....++..|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 238 (334)
T cd05100 166 LVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYP 238 (334)
T ss_pred EEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999997654322111 122234567999999999999999999999999999998 889885
No 290
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.97 E-value=3e-31 Score=265.61 Aligned_cols=203 Identities=26% Similarity=0.386 Sum_probs=169.2
Q ss_pred hhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
+.+++.+.....||+|+||.||+|... ++..|++|.+.... ....+.+.+|++++++++|+||+++++++...+..+
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD--SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 334555556678999999999999765 57789999886543 334567899999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCC--CHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC-CCCcEEeeccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNL--TWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-ELNPHLSDCGL 561 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l--~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~-~~~~kl~Dfgl 561 (618)
+|+||+++++|.++++.. ...+ ++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||.
T Consensus 82 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~ 155 (268)
T cd06624 82 IFMEQVPGGSLSALLRSK---WGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGT 155 (268)
T ss_pred EEEecCCCCCHHHHHHHh---cccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchh
Confidence 999999999999998632 2334 7888889999999999999998 9999999999999986 67999999999
Q ss_pred cccCCCCCccccccccccccccCccccccCC--ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNTERQVSTQMVGAFGYSAPEFALSGI--YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+........ ......|++.|+|||++.+.. ++.++||||||+++|+|++|+.||.
T Consensus 156 ~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~ 212 (268)
T cd06624 156 SKRLAGINP-CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFI 212 (268)
T ss_pred heecccCCC-ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCc
Confidence 876533221 122345889999999986643 7889999999999999999999985
No 291
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.97 E-value=1.8e-31 Score=267.88 Aligned_cols=204 Identities=33% Similarity=0.507 Sum_probs=173.1
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCC---
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHG--- 481 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~--- 481 (618)
.++++|+..+.||+|++|.||+|... +++.+++|.+.... ...+++.+|+++++++ +|+||+++++++....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE---DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence 45688999999999999999999875 57889999886543 2346788999999998 6999999999997644
Q ss_pred ---eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEee
Q 007107 482 ---QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSD 558 (618)
Q Consensus 482 ---~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~D 558 (618)
..++||||+++++|.++++........+++..+..++.|++.||+|||+. +++|+||+|+||++++++.+||+|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECC
Confidence 48999999999999999875443456789999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCccccccccccccccCcccccc-----CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFALS-----GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 559 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
||++........ ......|+..|+|||++.. ..++.++||||||+++|||++|+.||.
T Consensus 157 ~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 219 (275)
T cd06608 157 FGVSAQLDSTLG-RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLC 219 (275)
T ss_pred Cccceecccchh-hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCcc
Confidence 999876543222 2233568899999998854 346789999999999999999999995
No 292
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.97 E-value=2.7e-31 Score=266.50 Aligned_cols=200 Identities=28% Similarity=0.436 Sum_probs=169.3
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCccccc--------HHHHHHHHHHHHHhhcCCCCcccccceEEeeCC
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS--------LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (618)
+|...+.||+|++|.||+|... +|+.+|+|.++..... ....+.+.+|++.+++++||||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4667789999999999999765 5899999988642211 112346788999999999999999999999999
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccc
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl 561 (618)
..++||||+++++|.++++. ...+++..+..++.|++.||.|||+. +++||||+|+||++++++.++|+|||+
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~ 154 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRT----YGRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGI 154 (272)
T ss_pred ceEEEEecCCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeeccc
Confidence 99999999999999999863 35688999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCCcc-ccccccccccccCccccccCC--ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNTERQ-VSTQMVGAFGYSAPEFALSGI--YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+......... ......|+..|+|||.+.... ++.++||||||+++|||++|+.||.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~ 213 (272)
T cd06629 155 SKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWS 213 (272)
T ss_pred cccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCc
Confidence 9765432211 123346889999999987654 7899999999999999999999985
No 293
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=2.6e-31 Score=269.21 Aligned_cols=200 Identities=26% Similarity=0.391 Sum_probs=169.0
Q ss_pred CCcccceeccCccceEEEEEE----cCCcEEEEEEcCcccc--cHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEF----ANGKIMAVKKIDNAAL--SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 483 (618)
+|+..+.||+|+||.||+|+. .+|+.||+|++..... .....+.+.+|+++++++ +|+||+++++.+..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 367788999999999999976 3688999999875332 122346678899999999 599999999999999999
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++|+||+++++|.+++.. ...+++..+..++.|++.||+|||+. +++||||+|+||++++++.+||+|||++.
T Consensus 81 ~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 153 (290)
T cd05613 81 HLILDYINGGELFTHLSQ----RERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK 153 (290)
T ss_pred EEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccce
Confidence 999999999999999863 34678899999999999999999998 99999999999999999999999999997
Q ss_pred cCCCCCccccccccccccccCccccccC--CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTERQVSTQMVGAFGYSAPEFALSG--IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..............|+..|+|||.+.+. .++.++||||||+++|+|++|+.||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~ 209 (290)
T cd05613 154 EFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFT 209 (290)
T ss_pred ecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCC
Confidence 6543322222345688999999998753 46789999999999999999999984
No 294
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.97 E-value=2e-31 Score=269.12 Aligned_cols=200 Identities=28% Similarity=0.420 Sum_probs=169.9
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+|+..+.||+|++|.||+|... +|+.||+|++............+.+|++.+++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4778889999999999999875 589999999875543433446788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+. ++|.+++... ....+++..+..++.|++.||+|||+. +++||||+|+||++++++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 81 LH-QDLKKFMDAS--PLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred cc-cCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 96 6888888632 245689999999999999999999998 99999999999999999999999999987554322
Q ss_pred ccccccccccccccCccccccCC-ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGI-YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. .....+++.|+|||++.+.. ++.++||||||+++|||+||+.||.
T Consensus 155 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~ 202 (284)
T cd07860 155 RT-YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 202 (284)
T ss_pred cc-cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 21 22335788999999887654 5889999999999999999999984
No 295
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.97 E-value=1.4e-31 Score=272.11 Aligned_cols=195 Identities=28% Similarity=0.404 Sum_probs=168.7
Q ss_pred CcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEec
Q 007107 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYV 490 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 490 (618)
|.....||+|+||.||+|... +++.||+|.+..... ...+.+.+|+..++.++||||+++++++...+..++|+||+
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~ 100 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFL 100 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc--chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecC
Confidence 334447999999999999765 689999999864332 23466889999999999999999999999999999999999
Q ss_pred CCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCc
Q 007107 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570 (618)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~ 570 (618)
++++|.+++. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 101 ~~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~ 172 (297)
T cd06659 101 QGGALTDIVS-----QTRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP 172 (297)
T ss_pred CCCCHHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccc
Confidence 9999998774 34688999999999999999999999 999999999999999999999999999875543221
Q ss_pred cccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 571 QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
......|+..|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 173 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~ 218 (297)
T cd06659 173 -KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYF 218 (297)
T ss_pred -cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 2234578999999999998889999999999999999999999985
No 296
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.97 E-value=2.4e-31 Score=266.38 Aligned_cols=203 Identities=25% Similarity=0.412 Sum_probs=172.1
Q ss_pred CCcccceeccCccceEEEEEEcC--CcEEEEEEcCccc--------ccHHHHHHHHHHHHHhhc-CCCCcccccceEEee
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFAN--GKIMAVKKIDNAA--------LSLQEEDNFLEAVSNMSR-LRHPNIVTLAGYCAE 479 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~~--g~~vavK~~~~~~--------~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~ 479 (618)
.|+..+.||+|+||.||+|.... ++.+|+|.+.... .......++..|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 36777889999999999998765 6889999875332 122344567778887764 799999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeec
Q 007107 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (618)
Q Consensus 480 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Df 559 (618)
.+..++||||+++++|.+++.........+++..++.++.|++.||.|||+.. +++|+||+|+||++++++.+||+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEecc
Confidence 99999999999999999988654444567899999999999999999999631 8999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 560 GLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 560 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|.+....... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||.
T Consensus 159 g~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~ 214 (269)
T cd08528 159 GLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFY 214 (269)
T ss_pred cceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCccc
Confidence 9997655433 2234578899999999999889999999999999999999999985
No 297
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.97 E-value=3.6e-31 Score=264.11 Aligned_cols=198 Identities=27% Similarity=0.468 Sum_probs=175.4
Q ss_pred CCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+|+..+.||+|++|.||+|...+ ++.|++|++...... .....+.+|++.+.+++|+||+++++++...+..++|+||
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 57788899999999999998774 899999998765432 4567889999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE-VCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
+++++|.+++.. ...+++..+..++.|+++|++|||+ . +++||||+|+||+++.++.++|+|||.+......
T Consensus 81 ~~~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~ 153 (264)
T cd06623 81 MDGGSLADLLKK----VGKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENT 153 (264)
T ss_pred cCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence 999999999963 3678999999999999999999999 8 9999999999999999999999999998766433
Q ss_pred CccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... .....++..|+|||.+.+..++.++||||||+++|||+||+.||.
T Consensus 154 ~~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~ 201 (264)
T cd06623 154 LDQ-CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFL 201 (264)
T ss_pred CCc-ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence 222 123468889999999999999999999999999999999999985
No 298
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=3.2e-31 Score=266.87 Aligned_cols=191 Identities=31% Similarity=0.443 Sum_probs=158.7
Q ss_pred eeccCccceEEEEEEc-CCcEEEEEEcCcccccH-HHHHHHHHH---HHHhhcCCCCcccccceEEeeCCeEEEEEEecC
Q 007107 417 LIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL-QEEDNFLEA---VSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVG 491 (618)
Q Consensus 417 ~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~~~e---~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 491 (618)
.||+|+||.||+|... +++.||+|.+....... .....+..| .+.++...||+|+++++++...+..++||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999765 48899999986543321 122223333 334555689999999999999999999999999
Q ss_pred CCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCcc
Q 007107 492 NGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571 (618)
Q Consensus 492 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~ 571 (618)
+++|.+++. ....+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++........
T Consensus 81 g~~L~~~l~----~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~- 152 (278)
T cd05606 81 GGDLHYHLS----QHGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP- 152 (278)
T ss_pred CCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccCC-
Confidence 999998885 345689999999999999999999998 999999999999999999999999999875533221
Q ss_pred ccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 572 VSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
....|+..|+|||.+.++ .++.++||||+|+++|||++|+.||.
T Consensus 153 --~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~ 197 (278)
T cd05606 153 --HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR 197 (278)
T ss_pred --cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCC
Confidence 234689999999999754 68999999999999999999999996
No 299
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.97 E-value=2.3e-31 Score=268.00 Aligned_cols=191 Identities=29% Similarity=0.416 Sum_probs=157.9
Q ss_pred eeccCccceEEEEEEc-CCcEEEEEEcCcccccHH-HHHHHHHHHH---HhhcCCCCcccccceEEeeCCeEEEEEEecC
Q 007107 417 LIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQ-EEDNFLEAVS---NMSRLRHPNIVTLAGYCAEHGQRLLVYEYVG 491 (618)
Q Consensus 417 ~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~-~~~~~~~e~~---~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 491 (618)
.||+|+||.||++... +++.+|+|.+........ ....+.+|.. .+....||||+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999875 588999998865433222 2233344433 3334479999999999999999999999999
Q ss_pred CCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCcc
Q 007107 492 NGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571 (618)
Q Consensus 492 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~ 571 (618)
+++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||++........
T Consensus 81 ~~~L~~~i~----~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~- 152 (279)
T cd05633 81 GGDLHYHLS----QHGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP- 152 (279)
T ss_pred CCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccCc-
Confidence 999998886 235689999999999999999999999 999999999999999999999999999865532221
Q ss_pred ccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 572 VSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
....|+..|+|||.+.+ ..++.++||||+||++|||++|+.||.
T Consensus 153 --~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 197 (279)
T cd05633 153 --HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFR 197 (279)
T ss_pred --cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcC
Confidence 23468999999999864 558899999999999999999999995
No 300
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.97 E-value=2.6e-31 Score=264.33 Aligned_cols=187 Identities=30% Similarity=0.459 Sum_probs=158.8
Q ss_pred ceeccCccceEEEEEEcCCc-----------EEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 416 FLIGEGSLGRVYRAEFANGK-----------IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~~g~-----------~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
+.||+|+||.||+|.+.+.. .+++|.+...... ...+.+|+.++++++||||+++++++.. +..+
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 76 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD---SLAFFETASLMSQLSHKHLVKLYGVCVR-DENI 76 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh---HHHHHHHHHHHHcCCCcchhheeeEEec-CCcE
Confidence 36899999999999886533 5777776543321 5778899999999999999999999988 7789
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCC-------CcEEe
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL-------NPHLS 557 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~-------~~kl~ 557 (618)
+||||+++|+|.++++.. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+
T Consensus 77 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~ 150 (259)
T cd05037 77 MVEEYVKFGPLDVFLHRE---KNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLS 150 (259)
T ss_pred EEEEcCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeC
Confidence 999999999999998632 23688999999999999999999998 999999999999999887 79999
Q ss_pred eccccccCCCCCccccccccccccccCccccccC--CccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 558 DCGLAALTPNTERQVSTQMVGAFGYSAPEFALSG--IYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 558 Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
|||++..... .....++..|+|||++.+. .++.++||||||+++|||++ |..||.
T Consensus 151 Dfg~a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~ 208 (259)
T cd05037 151 DPGIPITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLS 208 (259)
T ss_pred CCCccccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcc
Confidence 9999876543 1224567789999999876 78999999999999999999 578775
No 301
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.97 E-value=2.8e-31 Score=267.19 Aligned_cols=193 Identities=27% Similarity=0.404 Sum_probs=165.9
Q ss_pred eccCccceEEEEEEc-CCcEEEEEEcCccccc-HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCCCh
Q 007107 418 IGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNL 495 (618)
Q Consensus 418 Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 495 (618)
||+|+||.||++... +|+.||+|.+...... ......+..|++++++++||||+++++.+...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999765 5899999998654322 22345667899999999999999999999999999999999999999
Q ss_pred hhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCcccccc
Q 007107 496 HDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQ 575 (618)
Q Consensus 496 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~~~~ 575 (618)
.+++.... ...+++..+..++.|++.||.|||+. +++||||+|+||++++++.+||+|||.+....... ....
T Consensus 81 ~~~l~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~--~~~~ 153 (277)
T cd05577 81 KYHIYNVG--EPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK--KIKG 153 (277)
T ss_pred HHHHHHcC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccCC--cccc
Confidence 99886322 24689999999999999999999999 99999999999999999999999999987654321 1223
Q ss_pred ccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 576 MVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 576 ~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..++..|+|||++.+..++.++||||||+++|+|++|+.||.
T Consensus 154 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 195 (277)
T cd05577 154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFR 195 (277)
T ss_pred ccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCC
Confidence 467889999999988889999999999999999999999995
No 302
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.97 E-value=4.5e-31 Score=263.27 Aligned_cols=195 Identities=31% Similarity=0.501 Sum_probs=159.5
Q ss_pred ceeccCccceEEEEEEcC----CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee-CCeEEEEEEec
Q 007107 416 FLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQRLLVYEYV 490 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e~~ 490 (618)
+.||+|+||.||+|.+.+ +..+|+|++.... .....+.+.+|+.+++.++||||+++++++.. ++..++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT-DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC-CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecC
Confidence 368999999999997642 4579999885432 33456678899999999999999999998754 55688999999
Q ss_pred CCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCc
Q 007107 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570 (618)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~ 570 (618)
.+|+|.++++. .....++..+..++.|++.||+|||+. +++||||||+|||+++++.+||+|||+++.......
T Consensus 80 ~~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 80 KHGDLRNFIRS---ETHNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred CCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 99999999863 234467788889999999999999998 999999999999999999999999999975532211
Q ss_pred ---cccccccccccccCccccccCCccccchhhhHHHHHHHHHhC-CCCCC
Q 007107 571 ---QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTG-RKPLD 617 (618)
Q Consensus 571 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg-~~Pf~ 617 (618)
.......++..|+|||.+.+..++.++|||||||++|||++| ..||.
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~ 204 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 204 (262)
T ss_pred eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCC
Confidence 111223467789999999888999999999999999999994 56664
No 303
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.97 E-value=2.8e-31 Score=270.78 Aligned_cols=201 Identities=27% Similarity=0.465 Sum_probs=167.3
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCc----EEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
.++|+..+.||+|+||.||+|.+. +|+ .+|+|.+.... .......+.+|+.+++.++||||+++++++... ..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~ 83 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TI 83 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cc
Confidence 356778889999999999999764 344 47888886543 233445688999999999999999999998754 56
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++++||+++|+|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++
T Consensus 84 ~~v~e~~~~g~l~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~ 157 (303)
T cd05110 84 QLVTQLMPHGCLLDYVHE---HKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (303)
T ss_pred eeeehhcCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccc
Confidence 799999999999999863 234688999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCccc-cccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 564 LTPNTERQV-STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
......... .....++..|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~ 213 (303)
T cd05110 158 LLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 213 (303)
T ss_pred cccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCC
Confidence 664332221 223345778999999998999999999999999999998 999985
No 304
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.97 E-value=3.3e-31 Score=266.08 Aligned_cols=188 Identities=27% Similarity=0.386 Sum_probs=156.3
Q ss_pred eeccCccceEEEEEEcC-------------------------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCccc
Q 007107 417 LIGEGSLGRVYRAEFAN-------------------------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV 471 (618)
Q Consensus 417 ~Lg~G~~g~Vy~~~~~~-------------------------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 471 (618)
.||+|+||.||+|.+.. ...|++|.+.... ......+.+|+.+++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHHHHHHHHhcCCCCCee
Confidence 58999999999997521 1358888886433 23345688899999999999999
Q ss_pred ccceEEeeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC
Q 007107 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (618)
Q Consensus 472 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~ 551 (618)
++++++.+....++||||+++|+|.++++. ....+++..+..++.|+++||+|||++ +|+||||||+|||+++.
T Consensus 80 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 80 FVHGVCVRGSENIMVEEFVEHGPLDVCLRK---EKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARL 153 (274)
T ss_pred eEEEEEEeCCceEEEEecCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEecc
Confidence 999999999999999999999999988863 345688999999999999999999998 99999999999999764
Q ss_pred C-------CcEEeeccccccCCCCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHH-hCCCCCC
Q 007107 552 L-------NPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELL-TGRKPLD 617 (618)
Q Consensus 552 ~-------~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~ell-tg~~Pf~ 617 (618)
+ .+|++|||.+...... ....++..|+|||.+.+ ..++.++||||||+++|||+ +|+.||.
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~ 223 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLK 223 (274)
T ss_pred CcccCccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCcc
Confidence 3 3799999987543221 12357788999998876 56899999999999999985 7999985
No 305
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.97 E-value=5.3e-31 Score=261.83 Aligned_cols=199 Identities=33% Similarity=0.531 Sum_probs=170.2
Q ss_pred cccceeccCccceEEEEEEcC-----CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 413 SQEFLIGEGSLGRVYRAEFAN-----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 413 ~~~~~Lg~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
+..+.||+|+||.||++...+ +..+|+|.+.... .....+.+..|++.++.++|+||+++++++.+.+..+++|
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA-DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC-ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 456789999999999998764 4889999996543 2235678899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++++|.++++... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||++.....
T Consensus 81 e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 81 EYMEGGDLLDYLRKNR--PKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYD 155 (258)
T ss_pred eccCCCCHHHHHHhhh--hccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceeccc
Confidence 9999999999986321 12289999999999999999999999 999999999999999999999999999976654
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
..........+++.|+|||.+.+..++.++||||+|+++|||++ |+.||+
T Consensus 156 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~ 206 (258)
T smart00219 156 DDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYP 206 (258)
T ss_pred ccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 32222212347789999999988889999999999999999998 889886
No 306
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.97 E-value=3.3e-31 Score=263.06 Aligned_cols=201 Identities=26% Similarity=0.437 Sum_probs=177.4
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+|+..+.||+|++|.||++... +++.+++|.+............+.+|++.+++++|+||+++++++......++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4777889999999999999765 688999999876555555667788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++++|.+++.........+++..+..++.|++.||+|||+. +++|+||+|+||++++++.+|++|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 999999999875444456789999999999999999999999 9999999999999999999999999999776543
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
......+++.|+|||.+.+..++.++|+||||+++|||++|+.||+
T Consensus 157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~ 202 (256)
T cd08530 157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFE 202 (256)
T ss_pred --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 2223468889999999999999999999999999999999999986
No 307
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.97 E-value=4.8e-31 Score=265.40 Aligned_cols=197 Identities=29% Similarity=0.512 Sum_probs=169.1
Q ss_pred CCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC---CCcccccceEEeeCCeEEEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR---HPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv 486 (618)
.|+..+.||+|+||.||+|.+ .+++.+++|.+.... ......++.+|++++++++ |||++++++++......++|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv 80 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII 80 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC-CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence 466778899999999999986 468999999986543 2234566788888888886 99999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+++++|.++++ ...+++..+..++.|++.||+|||+. +|+|+||+|+||++++++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~~~-----~~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06917 81 MEYAEGGSVRTLMK-----AGPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLN 152 (277)
T ss_pred EecCCCCcHHHHHH-----ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence 99999999999885 23688999999999999999999999 99999999999999999999999999997665
Q ss_pred CCCccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..... .....|+..|+|||.+.+. .++.++||||||+++|+|++|+.||+
T Consensus 153 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~ 203 (277)
T cd06917 153 QNSSK-RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYS 203 (277)
T ss_pred CCccc-cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCC
Confidence 43322 2334688999999998754 46899999999999999999999996
No 308
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.97 E-value=3.4e-31 Score=271.81 Aligned_cols=203 Identities=28% Similarity=0.408 Sum_probs=167.8
Q ss_pred CCcccceeccCccceEEEEEEcC---CcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeC--CeEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFAN---GKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQRL 484 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~~---g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 484 (618)
+|+..+.||+|++|.||+|.... ++.||+|.+..... .......+.+|++++.+++||||+++++++... +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 36778899999999999998754 78999999976331 112235567899999999999999999999888 7899
Q ss_pred EEEEecCCCChhhhhhcccCCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC----CCCcEEeec
Q 007107 485 LVYEYVGNGNLHDMLHFADDSS-KNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD----ELNPHLSDC 559 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~----~~~~kl~Df 559 (618)
+||||+++ ++.+++....... ..+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 6777765433333 3789999999999999999999999 9999999999999999 899999999
Q ss_pred cccccCCCCCc--cccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 560 GLAALTPNTER--QVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 560 gl~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|++........ .......+++.|+|||++.+. .++.++||||||+++|||++|+.||.
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~ 217 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFK 217 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCc
Confidence 99976543322 112335688999999988764 57899999999999999999999985
No 309
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.97 E-value=4.9e-31 Score=263.03 Aligned_cols=191 Identities=26% Similarity=0.393 Sum_probs=168.1
Q ss_pred eccCccceEEEEEEcC-CcEEEEEEcCccccc-HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCCCh
Q 007107 418 IGEGSLGRVYRAEFAN-GKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNL 495 (618)
Q Consensus 418 Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 495 (618)
||+|++|.||+|.... ++.+++|.+...... ....+.+.+|++++++++||||+++++++.+....++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 6899999999998764 889999998754432 33457789999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCcccccc
Q 007107 496 HDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQ 575 (618)
Q Consensus 496 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~~~~ 575 (618)
.++++. ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+....... ....
T Consensus 81 ~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~ 151 (262)
T cd05572 81 WTILRD----RGLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWT 151 (262)
T ss_pred HHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--cccc
Confidence 999963 34588999999999999999999998 99999999999999999999999999997665432 1223
Q ss_pred ccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 576 MVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 576 ~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..++..|+|||.+.+..++.++|+||+|+++|||++|+.||.
T Consensus 152 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 193 (262)
T cd05572 152 FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFG 193 (262)
T ss_pred ccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcC
Confidence 468899999999988889999999999999999999999985
No 310
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=5.5e-32 Score=275.43 Aligned_cols=203 Identities=23% Similarity=0.333 Sum_probs=171.7
Q ss_pred hcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
..-|..++.||-|+||.|.+++-.| ...||.|.+.+... ..........|-.+|.....+=||++|-.|.+.+.+|+|
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV 707 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV 707 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence 4458888999999999999996444 67899999876543 233345667788888888999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC-
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT- 565 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~- 565 (618)
|||++||++-.++- .-+.+.+..++.++..+..|+++.|+. |+|||||||+|||||.+|++||.|||++.-+
T Consensus 708 MdYIPGGDmMSLLI----rmgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfR 780 (1034)
T KOG0608|consen 708 MDYIPGGDMMSLLI----RMGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 780 (1034)
T ss_pred EeccCCccHHHHHH----HhccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccce
Confidence 99999999999885 346788888999999999999999999 9999999999999999999999999998421
Q ss_pred --------CCCC--------------------------------ccccccccccccccCccccccCCccccchhhhHHHH
Q 007107 566 --------PNTE--------------------------------RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVV 605 (618)
Q Consensus 566 --------~~~~--------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~i 605 (618)
...+ .......+||+.|+|||++....|+...|+||.|||
T Consensus 781 WTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvi 860 (1034)
T KOG0608|consen 781 WTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVI 860 (1034)
T ss_pred eccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHH
Confidence 1000 011234589999999999999999999999999999
Q ss_pred HHHHHhCCCCCCC
Q 007107 606 MLELLTGRKPLDR 618 (618)
Q Consensus 606 l~elltg~~Pf~~ 618 (618)
||||+.|+.||-+
T Consensus 861 l~em~~g~~pf~~ 873 (1034)
T KOG0608|consen 861 LYEMLVGQPPFLA 873 (1034)
T ss_pred HHHHhhCCCCccC
Confidence 9999999999953
No 311
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.97 E-value=8.5e-31 Score=260.13 Aligned_cols=203 Identities=30% Similarity=0.490 Sum_probs=179.6
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+|...+.||+|++|.||++... +++.+++|++..........+.+.+|++.++.++|||++++++.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4777889999999999999876 589999999987655556677889999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++++|.++++........+++..+..++.+++.||+|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 999999999975443457799999999999999999999999 99999999999999999999999999997664432
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||+
T Consensus 158 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~ 204 (258)
T cd08215 158 -DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFE 204 (258)
T ss_pred -ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCC
Confidence 22334578899999999998889999999999999999999999986
No 312
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.1e-33 Score=305.84 Aligned_cols=206 Identities=29% Similarity=0.408 Sum_probs=176.4
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
+...+-+|+....||.|.||.||.|... +|+..|+|.++.........+...+|+.++..++|||+|+++|+-...+..
T Consensus 1230 lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv 1309 (1509)
T KOG4645|consen 1230 LSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKV 1309 (1509)
T ss_pred hccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHH
Confidence 4455667888889999999999999654 599999999876655555567788999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
+|.||||++|+|.++++. +...++.....+..|++.|++|||+. |||||||||.||+++.+|.+|..|||.|.
T Consensus 1310 ~IFMEyC~~GsLa~ll~~----gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ 1382 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEH----GRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAV 1382 (1509)
T ss_pred HHHHHHhccCcHHHHHHh----cchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeeccccee
Confidence 999999999999999973 34456666777899999999999999 99999999999999999999999999998
Q ss_pred cCCCCCccc---cccccccccccCccccccCC---ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTERQV---STQMVGAFGYSAPEFALSGI---YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
...+..... -....||+.|||||++.+.. ...++||||+|||+.||+||++||.
T Consensus 1383 ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~ 1442 (1509)
T KOG4645|consen 1383 KIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWA 1442 (1509)
T ss_pred EecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchh
Confidence 765442111 13468999999999997654 4678999999999999999999986
No 313
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=248.26 Aligned_cols=201 Identities=27% Similarity=0.448 Sum_probs=167.2
Q ss_pred hhcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 485 (618)
..++.+....||.|..|.|+++++.. |..+|||.+.... ..++.++++..+.++.+- ..|+||+.+|+|..+...++
T Consensus 90 dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~-Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~I 168 (391)
T KOG0983|consen 90 DINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG-NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFI 168 (391)
T ss_pred ChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC-CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHH
Confidence 34556667789999999999998764 8999999998655 445566777777766554 48999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
.||.|.. .+..+++. ..+++++..+-++...++.||.||.++| +|||||+||+|||+|+.|.+|++|||++..+
T Consensus 169 cMelMs~-C~ekLlkr---ik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrl 242 (391)
T KOG0983|consen 169 CMELMST-CAEKLLKR---IKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRL 242 (391)
T ss_pred HHHHHHH-HHHHHHHH---hcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeeccccccee
Confidence 9999854 56666653 4567899888999999999999999997 9999999999999999999999999999665
Q ss_pred CCCCccccccccccccccCccccc---cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
-+...+ +.-+|-+.|||||.+. ..+|+.++||||||+.++||.||+.||.
T Consensus 243 vdSkAh--trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~ 295 (391)
T KOG0983|consen 243 VDSKAH--TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYK 295 (391)
T ss_pred eccccc--ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCC
Confidence 432222 3347889999999995 3468999999999999999999999996
No 314
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.9e-32 Score=280.42 Aligned_cols=200 Identities=30% Similarity=0.463 Sum_probs=173.1
Q ss_pred CCcccceeccCccceEEEEEEcC--Cc--EEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFAN--GK--IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~~--g~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
+....+.||+|.||.|++|.|.. |+ .||||.++...... ..++|++|+..|.+++|||++++||++.+ ....+|
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV 188 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMV 188 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHH
Confidence 34456689999999999998863 44 58999998765443 67899999999999999999999999987 688999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
+|.++.|+|.+.++. .....+-......++.|||.||.||.++ ++|||||..+|+|+-..-.|||+|||+++-..
T Consensus 189 ~ELaplGSLldrLrk--a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg 263 (1039)
T KOG0199|consen 189 FELAPLGSLLDRLRK--AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALG 263 (1039)
T ss_pred hhhcccchHHHHHhh--ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccC
Confidence 999999999999985 3456688888999999999999999999 99999999999999988899999999999876
Q ss_pred CCCcccc--ccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 567 NTERQVS--TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 567 ~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
..++++. ...--.+.|+|||.+...+++.++|||+|||++|||+| |+.||-
T Consensus 264 ~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~ 317 (1039)
T KOG0199|consen 264 ENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWV 317 (1039)
T ss_pred CCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCC
Confidence 6555442 22345668999999999999999999999999999999 888873
No 315
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.97 E-value=5.8e-31 Score=267.08 Aligned_cols=199 Identities=28% Similarity=0.436 Sum_probs=173.0
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
...+|...+.||+|+||.||++... +++.+++|.+.... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 17 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 17 PKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ--QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred chhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc--chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 3467888999999999999999764 57899999986432 22346788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
+||+++++|.+++. ...+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++....
T Consensus 95 ~e~~~~~~L~~~~~-----~~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~ 166 (293)
T cd06647 95 MEYLAGGSLTDVVT-----ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 166 (293)
T ss_pred EecCCCCcHHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccc
Confidence 99999999999885 24578889999999999999999999 99999999999999999999999999887554
Q ss_pred CCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... ......|++.|+|||.+.+..++.++||||||+++||+++|+.||.
T Consensus 167 ~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~ 216 (293)
T cd06647 167 PEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYL 216 (293)
T ss_pred cccc-ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 3322 2233468889999999988889999999999999999999999995
No 316
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.97 E-value=4.9e-31 Score=266.11 Aligned_cols=207 Identities=27% Similarity=0.466 Sum_probs=171.2
Q ss_pred hhhhhhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEee
Q 007107 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAE 479 (618)
Q Consensus 402 ~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 479 (618)
+.++..+.+.|+..+.||+|+||.||+|... +++.+|+|.+.... .....+..|+.++.++ +|+||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 8 LSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 3444556678999999999999999999875 58899999875432 3345677888888888 69999999998853
Q ss_pred ------CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCC
Q 007107 480 ------HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN 553 (618)
Q Consensus 480 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~ 553 (618)
....+++|||+++|+|.+++...+ ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~ 159 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTK--GNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAE 159 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCC
Confidence 457899999999999999886432 34578888999999999999999999 9999999999999999999
Q ss_pred cEEeeccccccCCCCCccccccccccccccCccccc-----cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 554 PHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 554 ~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++|+|||++........ ......|++.|+|||.+. ...++.++|||||||++|||++|+.||.
T Consensus 160 ~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~ 227 (282)
T cd06636 160 VKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLC 227 (282)
T ss_pred EEEeeCcchhhhhcccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCcc
Confidence 99999999875532221 123356899999999986 3457889999999999999999999995
No 317
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.97 E-value=8.8e-31 Score=263.56 Aligned_cols=197 Identities=27% Similarity=0.448 Sum_probs=171.7
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
-|+..+.||+|+||.||+|... +++.+|+|.+..... ....+.+.+|++.+.+++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 4667788999999999999764 688999998865432 23456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++++|.++++ ...+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~l~~~i~-----~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06641 84 LGGGSALDLLE-----PGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 155 (277)
T ss_pred CCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccch
Confidence 99999999885 34688999999999999999999998 99999999999999999999999999987654322
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. ......++..|+|||.+.+..++.++|||||||++|||++|+.||.
T Consensus 156 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~ 202 (277)
T cd06641 156 I-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHS 202 (277)
T ss_pred h-hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCC
Confidence 1 1223468889999999988888999999999999999999999985
No 318
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.97 E-value=2.6e-31 Score=266.14 Aligned_cols=197 Identities=31% Similarity=0.501 Sum_probs=164.6
Q ss_pred eeccCccceEEEEEEcC-------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 417 LIGEGSLGRVYRAEFAN-------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 417 ~Lg~G~~g~Vy~~~~~~-------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
.||+|+||.||+|...+ ++.+++|.+.... .......+.+|++.++.++||||+++++++...+..++||||
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA-TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhccc-chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 68999999999997653 2578999886432 223456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccC---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCC-----CcEEeeccc
Q 007107 490 VGNGNLHDMLHFADD---SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL-----NPHLSDCGL 561 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~-----~~kl~Dfgl 561 (618)
+++++|.++++.... ....+++.++..++.|++.||+|||+. +++|+||||+||++++++ .+|++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 999999999964322 224578899999999999999999998 999999999999999877 899999999
Q ss_pred cccCCCCCcc-ccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 562 AALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
+......... ......++..|+|||++.+..++.++|||||||++|||+| |+.||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~ 215 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYP 215 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCc
Confidence 8755332211 1122345678999999999999999999999999999998 999985
No 319
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.97 E-value=5.6e-31 Score=261.67 Aligned_cols=201 Identities=27% Similarity=0.453 Sum_probs=173.0
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+|+..+.||+|+||.||+|... +|..+|+|.+..........+.+.+|++++++++|+||+++++.+...+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4677889999999999999876 488999999876544444567788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCC-cEEeeccccccCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN-PHLSDCGLAALTPNT 568 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~-~kl~Dfgl~~~~~~~ 568 (618)
+++++|.+++... ....+++..+..++.|+++||+|||+. +++|+||||+||++++++. +||+|||.+......
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 81 CDGGDLMKRINRQ--RGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred CCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 9999999988632 234579999999999999999999998 9999999999999998754 699999998766433
Q ss_pred CccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. ......|++.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 156 ~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 203 (257)
T cd08225 156 ME-LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFE 203 (257)
T ss_pred cc-cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 22 2223468899999999988889999999999999999999999986
No 320
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.97 E-value=3.8e-31 Score=268.49 Aligned_cols=200 Identities=28% Similarity=0.399 Sum_probs=169.3
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC--CeEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQRLLV 486 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 486 (618)
++|+..+.||+|+||.||+|... +++.+++|.++...........+.+|++++++++||||+++++++... +..++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888889999999999999876 588999999975543333344567899999999999999999998877 889999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+++ +|.+++... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||++....
T Consensus 85 ~e~~~~-~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 85 MEYVEH-DLKSLMETM---KQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred ehhcCc-CHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 999974 898888632 23689999999999999999999999 99999999999999999999999999987665
Q ss_pred CCCccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..... .....+++.|+|||.+.+. .++.++||||+|+++|||++|+.||.
T Consensus 158 ~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~ 208 (293)
T cd07843 158 SPLKP-YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFP 208 (293)
T ss_pred CCccc-cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCC
Confidence 43221 1234578899999998764 46889999999999999999999985
No 321
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.97 E-value=6.5e-31 Score=274.02 Aligned_cols=198 Identities=23% Similarity=0.336 Sum_probs=169.5
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC------
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH------ 480 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 480 (618)
..++|+..+.||+|+||.||+|... +|+.||+|.+............+.+|++++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4577999999999999999999765 689999999875544444556778899999999999999999988644
Q ss_pred CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecc
Q 007107 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (618)
Q Consensus 481 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfg 560 (618)
...++||||+. ++|.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQM------DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCc
Confidence 35699999996 488887741 278889999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+++...... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||.
T Consensus 164 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~ 218 (353)
T cd07850 164 LARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFP 218 (353)
T ss_pred cceeCCCCC--CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCC
Confidence 997654322 1233468899999999999999999999999999999999999985
No 322
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.97 E-value=5.4e-31 Score=261.51 Aligned_cols=193 Identities=30% Similarity=0.496 Sum_probs=165.2
Q ss_pred cCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
++|...+.||+|+||.||++.. .++.||+|.++... ....+.+|+.++++++|||++++++++... ..++||||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~ 79 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMEL 79 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEEC
Confidence 4578888999999999999975 57889999986432 345788999999999999999999998655 47999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++++|.++++.. ....+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 80 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~ 154 (254)
T cd05083 80 MSKGNLVNFLRTR--GRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV 154 (254)
T ss_pred CCCCCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccC
Confidence 9999999998642 234688999999999999999999998 99999999999999999999999999987543221
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.....+..|+|||.+.+..++.++||||||+++|||++ |+.||.
T Consensus 155 ----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~ 199 (254)
T cd05083 155 ----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYP 199 (254)
T ss_pred ----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCc
Confidence 12234567999999998899999999999999999998 999985
No 323
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.97 E-value=7.4e-31 Score=266.49 Aligned_cols=201 Identities=25% Similarity=0.361 Sum_probs=167.2
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
++|+..+.||+|++|.||+|... +|+.||+|++............+.+|++.+++++||||+++++++...+..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888899999999999999876 58899999987544333345678889999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC-CCCcEEeeccccccCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-ELNPHLSDCGLAALTPN 567 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~-~~~~kl~Dfgl~~~~~~ 567 (618)
|++ ++|.+++... ....+++..+..++.||+.||+|||++ +++||||+|+||++++ ++.+||+|||++.....
T Consensus 82 ~~~-~~l~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~ 155 (294)
T PLN00009 82 YLD-LDLKKHMDSS--PDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155 (294)
T ss_pred ccc-ccHHHHHHhC--CCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence 996 5787777522 233467888899999999999999999 9999999999999985 56799999999975533
Q ss_pred CCccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... ......+++.|+|||++.+. .++.++||||+|+++|+|+||+.||.
T Consensus 156 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~ 205 (294)
T PLN00009 156 PVR-TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFP 205 (294)
T ss_pred Ccc-ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 221 11234678899999998764 57899999999999999999999985
No 324
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.97 E-value=6e-31 Score=267.22 Aligned_cols=203 Identities=23% Similarity=0.331 Sum_probs=167.1
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-CCcccccceEEeeCCe-----
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQ----- 482 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~----- 482 (618)
++|+..+.||+|+||.||+|... +|+.||+|++............+.+|+++++++. ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36888899999999999999875 5899999998654433323456788999999995 6999999999877665
Q ss_pred EEEEEEecCCCChhhhhhcccCC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC-CCCcEEeecc
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDS-SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-ELNPHLSDCG 560 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~-~~~~kl~Dfg 560 (618)
.++||||+++ +|.+++...... ...+++..++.++.||+.||+|||++ +|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence 8999999985 888887643322 35689999999999999999999999 9999999999999998 8899999999
Q ss_pred ccccCCCCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++......... .....+++.|+|||++.+ ..++.++||||||+++|||++|+.||.
T Consensus 157 ~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~ 213 (295)
T cd07837 157 LGRAFSIPVKS-YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFP 213 (295)
T ss_pred cceecCCCccc-cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCC
Confidence 98755322211 122356888999998865 457899999999999999999999984
No 325
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.97 E-value=8.7e-31 Score=262.87 Aligned_cols=203 Identities=25% Similarity=0.464 Sum_probs=167.4
Q ss_pred CcccceeccCccceEEEEEEc----CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC------
Q 007107 412 FSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG------ 481 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 481 (618)
|...+.||+|+||.||+|.+. .++.+|+|+++.........+++.+|++.+++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 456678999999999999754 3688999999766555556778899999999999999999999886532
Q ss_pred eEEEEEEecCCCChhhhhhccc--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeec
Q 007107 482 QRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Df 559 (618)
..++++||+.+|+|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 2478999999999988874322 1223578899999999999999999998 9999999999999999999999999
Q ss_pred cccccCCCCCcc-ccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 560 GLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 560 gl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
|+++........ ......+++.|++||.+....++.++||||||+++|||++ |+.||.
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~ 217 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYA 217 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCC
Confidence 999765432211 1122345678999999998889999999999999999999 889985
No 326
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.97 E-value=1.2e-30 Score=266.77 Aligned_cols=198 Identities=32% Similarity=0.483 Sum_probs=169.0
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCccc-ccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAA-LSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
..+.|...+.||+|+||.||+|... +|+.||+|.+.... ...+..+++.+|+++++.++||||+++++++...+..++
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~l 92 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWL 92 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEE
Confidence 3456888899999999999999875 58999999886443 233445678899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
|+||++ |++.+++.. ....+++..+..++.|++.||.|||+. +|+||||+|+||++++++.+||+|||++...
T Consensus 93 v~e~~~-g~l~~~~~~---~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~ 165 (307)
T cd06607 93 VMEYCL-GSASDILEV---HKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLV 165 (307)
T ss_pred EHHhhC-CCHHHHHHH---cccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceec
Confidence 999997 577776642 234689999999999999999999998 9999999999999999999999999998755
Q ss_pred CCCCccccccccccccccCccccc---cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... ....++..|+|||++. ...++.++||||||+++|||+||+.||.
T Consensus 166 ~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~ 215 (307)
T cd06607 166 SPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 215 (307)
T ss_pred CCC-----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCC
Confidence 332 2346788999999884 4568899999999999999999999985
No 327
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.97 E-value=8.1e-31 Score=264.63 Aligned_cols=199 Identities=28% Similarity=0.405 Sum_probs=168.1
Q ss_pred CcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEec
Q 007107 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYV 490 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 490 (618)
|+..+.||+|++|.||+|... +|+.||+|++............+.+|++.+++++|||++++++++.+.+..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 566788999999999999765 6999999998755433333456888999999999999999999999999999999999
Q ss_pred CCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCc
Q 007107 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570 (618)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~ 570 (618)
+ ++|.+++.... ...+++..+..++.|+++||+|||+. +++||||+|+||++++++.++|+|||++........
T Consensus 81 ~-~~l~~~~~~~~--~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 81 D-LDLKKYMDSSP--LTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred C-cCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence 5 68998886322 24689999999999999999999998 999999999999999999999999999976543222
Q ss_pred cccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 571 QVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. .....++..|+|||++.+. .++.++||||||+++|||++|+.||.
T Consensus 155 ~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 201 (283)
T cd07835 155 T-YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFP 201 (283)
T ss_pred c-cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 1 1223568899999988764 57889999999999999999999985
No 328
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.97 E-value=5.4e-31 Score=268.53 Aligned_cols=204 Identities=27% Similarity=0.391 Sum_probs=170.2
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC----
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG---- 481 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 481 (618)
...++|+..+.||+|+||.||+|... +|+.||+|+++...........+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45578889999999999999999876 4889999998754433334456788999999999999999999987654
Q ss_pred ------eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcE
Q 007107 482 ------QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPH 555 (618)
Q Consensus 482 ------~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~k 555 (618)
..++|+||+++ ++.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLES---GLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEE
Confidence 78999999986 67666642 234689999999999999999999999 999999999999999999999
Q ss_pred EeeccccccCCCCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 556 LSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 556 l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|+|||.+...............++..|+|||.+.+ ..++.++|||||||++|||++|+.||.
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~ 219 (302)
T cd07864 157 LADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQ 219 (302)
T ss_pred eCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence 99999997664433222233456788999998865 457889999999999999999999996
No 329
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.97 E-value=7.4e-31 Score=265.40 Aligned_cols=201 Identities=29% Similarity=0.422 Sum_probs=175.3
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
...+.|+....||+|++|.||+|.+. +++.+++|++..... ....+.+|++.+++++|+||+++++.+...+..++
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 92 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWV 92 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEE
Confidence 45667888889999999999999876 688999999875432 45678899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
|+||+++++|.++++.. ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++...
T Consensus 93 v~e~~~~~~L~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~ 166 (286)
T cd06614 93 VMEYMDGGSLTDIITQN---FVRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQL 166 (286)
T ss_pred EEeccCCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhh
Confidence 99999999999999732 13789999999999999999999998 9999999999999999999999999988655
Q ss_pred CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..... ......++..|+|||++.+..++.++||||||+++|+|++|+.||.
T Consensus 167 ~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~ 217 (286)
T cd06614 167 TKEKS-KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYL 217 (286)
T ss_pred ccchh-hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCC
Confidence 43221 1223457889999999998889999999999999999999999986
No 330
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.97 E-value=7.3e-31 Score=265.25 Aligned_cols=199 Identities=28% Similarity=0.445 Sum_probs=169.6
Q ss_pred CcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC--CeEEEEEE
Q 007107 412 FSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQRLLVYE 488 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 488 (618)
|+..+.||+|++|.||+|...+ ++.+|+|++............+.+|++++++++|||++++++++... +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 5667789999999999998764 88999999986543334456788999999999999999999999988 89999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+++ +|.+++.. ....+++..+..++.|++.||+|||+. +++|+||+|+||++++++.+||+|||++......
T Consensus 81 ~~~~-~l~~~~~~---~~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 81 YMDH-DLTGLLDS---PEVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred cccc-cHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 9975 88888752 225789999999999999999999998 9999999999999999999999999999766544
Q ss_pred CccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.........++..|+|||.+.+ ..++.++||||||+++|||+||+.||+
T Consensus 154 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~ 203 (287)
T cd07840 154 NSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQ 203 (287)
T ss_pred CcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCC
Confidence 3222233467888999998765 457899999999999999999999985
No 331
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.97 E-value=5.3e-31 Score=269.58 Aligned_cols=201 Identities=31% Similarity=0.437 Sum_probs=168.1
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC--CeEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQRLL 485 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 485 (618)
.++|+..+.||+|+||.||+|... +|+.||+|+++...........+.+|+.++++++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 467889999999999999999875 589999999865433322234566899999999999999999998765 56899
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+++ +|.+++... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||++...
T Consensus 86 v~e~~~~-~l~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 86 VMEYCEQ-DLASLLDNM---PTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EEecCCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeec
Confidence 9999974 888887632 35689999999999999999999999 9999999999999999999999999999766
Q ss_pred CCCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
...... .....+++.|+|||.+.+ ..++.++||||+||++|||++|+.||.
T Consensus 159 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~ 210 (309)
T cd07845 159 GLPAKP-MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLP 210 (309)
T ss_pred CCccCC-CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCC
Confidence 533221 222346788999999876 457899999999999999999999985
No 332
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.97 E-value=1.8e-30 Score=257.45 Aligned_cols=199 Identities=28% Similarity=0.451 Sum_probs=176.4
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+|+..+.||+|++|.||++... +++.|++|.+..........+.+.+|++++++++|||++++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4677889999999999999766 578999999987665545677899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++++|.+++.. ...+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~~~~----~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 81 AENGSLRQIIKK----FGPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred CCCCcHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 999999999862 36789999999999999999999999 99999999999999999999999999997665433
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. .....++..|+|||...+..++.++||||+|+++|+|++|+.||.
T Consensus 154 ~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~ 200 (254)
T cd06627 154 KD-DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYY 200 (254)
T ss_pred cc-ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence 22 233568899999999988888999999999999999999999985
No 333
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.97 E-value=7.5e-31 Score=264.83 Aligned_cols=201 Identities=26% Similarity=0.439 Sum_probs=170.7
Q ss_pred cCCcccceeccCccceEEEEEEc-----CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee--CCe
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE--HGQ 482 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~ 482 (618)
++|...+.||+|+||.||+|.+. .++.+|+|.++..... .....+.+|++.++.++||||+++++++.. ...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~ 82 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS 82 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence 45677789999999999999764 3688999999765433 456789999999999999999999999877 557
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccc
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~ 562 (618)
.++||||+++++|.+++... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.+
T Consensus 83 ~~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 83 LRLIMEYLPSGSLRDYLQRH---RDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred eEEEEecCCCCCHHHHHHhC---ccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccc
Confidence 89999999999999999632 33689999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCccc--cccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 563 ALTPNTERQV--STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.......... .....++..|+|||.+.+..++.++||||||+++|||+||+.||.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~ 213 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQ 213 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcc
Confidence 8765322211 112345567999999998899999999999999999999999975
No 334
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-31 Score=257.29 Aligned_cols=214 Identities=26% Similarity=0.419 Sum_probs=178.9
Q ss_pred ehhhhhhhhcCCcccceeccCccceEEEEEEcC------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccc
Q 007107 401 TVASLQTATNSFSQEFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLA 474 (618)
Q Consensus 401 ~~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 474 (618)
+..++.....+++....+-+|.||+||+|.|.+ .+.|.+|.++... +......++.|.-++..+.|||+.++.
T Consensus 275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A-S~iQv~~~L~es~lly~~sH~nll~V~ 353 (563)
T KOG1024|consen 275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA-SQIQVNLLLQESMLLYGASHPNLLSVL 353 (563)
T ss_pred hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc-cHHHHHHHHHHHHHHhcCcCCCcccee
Confidence 445566667778888899999999999996653 4567778777655 444567788888888889999999999
Q ss_pred eEEeeC-CeEEEEEEecCCCChhhhhhcccCC----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeec
Q 007107 475 GYCAEH-GQRLLVYEYVGNGNLHDMLHFADDS----SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD 549 (618)
Q Consensus 475 ~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~ 549 (618)
+++.++ ...+.++.++..|+|+.|++.++.. .+.++..+...++.|++.|++|||+. +|||.||.++|++||
T Consensus 354 ~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvId 430 (563)
T KOG1024|consen 354 GVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVID 430 (563)
T ss_pred EEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceeh
Confidence 998665 5678999999999999999865532 23467778889999999999999999 999999999999999
Q ss_pred CCCCcEEeeccccccC-CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCCC
Q 007107 550 DELNPHLSDCGLAALT-PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDR 618 (618)
Q Consensus 550 ~~~~~kl~Dfgl~~~~-~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~~ 618 (618)
+...+||+|=.++|.. +.+..........+..||+||.+....|+.++|||||||+||||+| |+.|+.+
T Consensus 431 d~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~Pyae 501 (563)
T KOG1024|consen 431 DQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAE 501 (563)
T ss_pred hheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccc
Confidence 9999999999999854 4444455555667789999999999999999999999999999999 9999863
No 335
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.97 E-value=5e-31 Score=272.72 Aligned_cols=201 Identities=26% Similarity=0.395 Sum_probs=169.5
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee----CCeE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE----HGQR 483 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~ 483 (618)
..+|+..+.||+|++|.||+|... +|+.||+|++..........+.+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 367888899999999999999765 58999999987654333445677889999999999999999998763 3468
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++||||+. ++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.
T Consensus 84 ~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 84 YVVMDLME-SDLHHIIH----SDQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred EEEEehhh-hhHHHHhc----cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccce
Confidence 99999996 58988885 345589999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCc---cccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTER---QVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
....... .......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~ 213 (334)
T cd07855 156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFP 213 (334)
T ss_pred eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccC
Confidence 5533221 12234578899999999866 468899999999999999999999995
No 336
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.97 E-value=1.9e-30 Score=256.61 Aligned_cols=198 Identities=31% Similarity=0.521 Sum_probs=174.8
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+|+..+.||+|++|.||++... +++.+++|++..... ...+.+.+|++.+++++|+||+++++++......++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~ 78 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF 78 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence 4677789999999999999876 688999999976543 3567889999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++++|.+++... ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.+.......
T Consensus 79 ~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 152 (253)
T cd05122 79 CSGGSLKDLLKST---NQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK 152 (253)
T ss_pred CCCCcHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeeccccccccccc
Confidence 9999999988632 25789999999999999999999998 99999999999999999999999999987665433
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
. .....++..|+|||.+.+..++.++||||||+++|+|++|+.||+.
T Consensus 153 ~--~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 199 (253)
T cd05122 153 A--RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSE 199 (253)
T ss_pred c--ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 2 2345688999999999988899999999999999999999999863
No 337
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=3.7e-33 Score=257.27 Aligned_cols=201 Identities=28% Similarity=0.411 Sum_probs=164.4
Q ss_pred CcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhh-cCCCCcccccceEEeeCCeEEEEEEe
Q 007107 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMS-RLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~-~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
.+....||.|+||+|+|-.++ .|+.+|||++..... ..+.++++.|.+... .-+.||||+++|.+..++..|+.||.
T Consensus 66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMEL 144 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMEL 144 (361)
T ss_pred HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHH
Confidence 344567999999999999765 599999999987664 346677777777654 44799999999999999999999999
Q ss_pred cCCCChhhhhhc-ccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 490 VGNGNLHDMLHF-ADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 490 ~~~gsL~~~l~~-~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+- +|..+... +.-....+++...-+|....+.||.||.+.. +|||||+||+|||++..|.+||+|||++....+
T Consensus 145 Md~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~- 220 (361)
T KOG1006|consen 145 MDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD- 220 (361)
T ss_pred Hhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHH-
Confidence 964 77665532 2223457888888889999999999999885 899999999999999999999999999865432
Q ss_pred CccccccccccccccCcccccc--CCccccchhhhHHHHHHHHHhCCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALS--GIYTVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
....+..+|-..|||||.+.. ..|+-++||||||++|||+.||+.|+++
T Consensus 221 -SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~ 271 (361)
T KOG1006|consen 221 -SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRK 271 (361)
T ss_pred -HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcch
Confidence 222234578889999999964 3489999999999999999999999863
No 338
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.97 E-value=1.6e-30 Score=262.78 Aligned_cols=196 Identities=30% Similarity=0.436 Sum_probs=169.2
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
.|...+.||+|++|.||++... +++.+++|++.... ....+.+.+|+.+++.++||||+++++++...+..++|+||
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~ 97 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK--QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEF 97 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEec
Confidence 3445568999999999999864 68899999885432 23456688999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||+|+||++++++.++|+|||.+.......
T Consensus 98 ~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~ 169 (285)
T cd06648 98 LEGGALTDIVTH-----TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV 169 (285)
T ss_pred cCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCC
Confidence 999999998862 4688999999999999999999999 99999999999999999999999999886543322
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. ......|++.|+|||.+.+..++.++||||||+++|||++|+.||.
T Consensus 170 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~ 216 (285)
T cd06648 170 P-RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYF 216 (285)
T ss_pred c-ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCc
Confidence 1 1223568899999999998889999999999999999999999984
No 339
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.97 E-value=9.3e-31 Score=261.06 Aligned_cols=193 Identities=30% Similarity=0.444 Sum_probs=167.4
Q ss_pred eccCccceEEEEEEcC-CcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCCCh
Q 007107 418 IGEGSLGRVYRAEFAN-GKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNL 495 (618)
Q Consensus 418 Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 495 (618)
||+|+||.||++...+ |+.+++|.+..... .......+.+|++.+++++||||+++++.+...+..++++||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 6899999999998875 89999999875433 223456788999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCc-----
Q 007107 496 HDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER----- 570 (618)
Q Consensus 496 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~----- 570 (618)
.++++. ...+++..+..++.|+++||+|||+. +++||||+|+||++++++.++|+|||++........
T Consensus 81 ~~~l~~----~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 153 (265)
T cd05579 81 ASLLEN----VGSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND 153 (265)
T ss_pred HHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence 999863 23689999999999999999999999 999999999999999999999999999865432211
Q ss_pred --cccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 571 --QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 571 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.......++..|+|||......++.++||||||+++|||++|+.||.
T Consensus 154 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~ 202 (265)
T cd05579 154 DEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFH 202 (265)
T ss_pred ccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence 12233568889999999998889999999999999999999999986
No 340
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.97 E-value=1.1e-30 Score=265.21 Aligned_cols=202 Identities=19% Similarity=0.245 Sum_probs=153.5
Q ss_pred hhcCCcccceeccCccceEEEEEEcCC----cEEEEEEcCcccccHHH---------HHHHHHHHHHhhcCCCCcccccc
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFANG----KIMAVKKIDNAALSLQE---------EDNFLEAVSNMSRLRHPNIVTLA 474 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~g----~~vavK~~~~~~~~~~~---------~~~~~~e~~~l~~l~h~niv~l~ 474 (618)
..++|.+.+.||+|+||.||+|...++ ..+|+|........... ......+...+..+.|+|+++++
T Consensus 10 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~ 89 (294)
T PHA02882 10 TGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYY 89 (294)
T ss_pred CCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEE
Confidence 346799999999999999999987653 45566653322211111 11223334556677999999999
Q ss_pred eEEeeCC----eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC
Q 007107 475 GYCAEHG----QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD 550 (618)
Q Consensus 475 ~~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~ 550 (618)
+.+.... ..++++|++.. ++.+.+.. ....++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~ 161 (294)
T PHA02882 90 GCGSFKRCRMYYRFILLEKLVE-NTKEIFKR----IKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDG 161 (294)
T ss_pred EeeeEecCCceEEEEEEehhcc-CHHHHHHh----hccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcC
Confidence 8765543 34678887643 66666542 23356788899999999999999999 9999999999999999
Q ss_pred CCCcEEeeccccccCCCCCc------cccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 551 ELNPHLSDCGLAALTPNTER------QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 551 ~~~~kl~Dfgl~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++.++|+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||+
T Consensus 162 ~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~ 234 (294)
T PHA02882 162 NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWK 234 (294)
T ss_pred CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999976532211 11123469999999999999999999999999999999999999996
No 341
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-32 Score=272.98 Aligned_cols=200 Identities=23% Similarity=0.326 Sum_probs=178.2
Q ss_pred hcCCcccceeccCccceEEEEEEcCCc-EEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFANGK-IMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~g~-~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
-.++.....||-|+||.|-++.....+ .+|+|.+++... .....+....|-.+|...+.|.||++|..|.+....|+.
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence 345666778999999999999876543 488888876543 444566778889999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
||-|-||.+...++ ..+.++..+..-++..+++|++|||++ +||.|||||+|.|++.+|.+||.|||+|+...
T Consensus 499 mEaClGGElWTiLr----dRg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~ 571 (732)
T KOG0614|consen 499 MEACLGGELWTILR----DRGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIG 571 (732)
T ss_pred HHhhcCchhhhhhh----hcCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhc
Confidence 99999999999997 567899999999999999999999999 99999999999999999999999999999886
Q ss_pred CCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... .+..++|||.|.|||++.....+.++|.||||+++|||+||.+||.
T Consensus 572 ~g~--KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs 620 (732)
T KOG0614|consen 572 SGR--KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFS 620 (732)
T ss_pred cCC--ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCC
Confidence 544 3467899999999999999999999999999999999999999996
No 342
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=1.5e-30 Score=259.16 Aligned_cols=190 Identities=25% Similarity=0.348 Sum_probs=160.0
Q ss_pred ceeccCccceEEEEEEc-CCcEEEEEEcCccccc-HHHHHHHHHHHHH-hhcCCCCcccccceEEeeCCeEEEEEEecCC
Q 007107 416 FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSN-MSRLRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 492 (618)
+.||+|+||.||+|... +|+.||+|.+...... ......+..|... ....+|+|++++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999775 5889999998754322 1222333444443 4455899999999999999999999999999
Q ss_pred CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccc
Q 007107 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (618)
Q Consensus 493 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~ 572 (618)
++|.++++. ...+++..+..++.|++.||.|||+. +++||||+|+||++++++.+||+|||++.....
T Consensus 82 ~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----- 149 (260)
T cd05611 82 GDCASLIKT----LGGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----- 149 (260)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc-----
Confidence 999999863 34688999999999999999999998 999999999999999999999999999875432
Q ss_pred cccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.....++..|+|||.+.+..++.++||||||+++|||++|+.||.
T Consensus 150 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 194 (260)
T cd05611 150 NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFH 194 (260)
T ss_pred cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCC
Confidence 123468889999999988889999999999999999999999995
No 343
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.97 E-value=1.2e-30 Score=263.34 Aligned_cols=200 Identities=28% Similarity=0.432 Sum_probs=168.9
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+|+..+.||+|++|.||+|... +|+.||+|+++..... .....+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE-GTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc-cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence 4778889999999999999876 5889999998754322 2345677899999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++ +|.+++.... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||++.......
T Consensus 80 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~ 154 (284)
T cd07836 80 MDK-DLKKYMDTHG-VRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV 154 (284)
T ss_pred CCc-cHHHHHHhcC-CCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc
Confidence 985 8888875332 235689999999999999999999998 99999999999999999999999999997554322
Q ss_pred ccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. .....++..|+|||++.+. .++.++||||||+++|||++|+.||.
T Consensus 155 ~~-~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~ 202 (284)
T cd07836 155 NT-FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFP 202 (284)
T ss_pred cc-cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 21 1234578899999998664 57889999999999999999999985
No 344
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.3e-33 Score=255.86 Aligned_cols=197 Identities=26% Similarity=0.403 Sum_probs=172.8
Q ss_pred cccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC-----eEEEE
Q 007107 413 SQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG-----QRLLV 486 (618)
Q Consensus 413 ~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~lv 486 (618)
+..+.||-|+||.||.+.+. +|+.||.|++..-.......+.+.+|++++.-++|.|++..+++..-.. ++|.+
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 34567999999999999664 6999999999876666667788999999999999999999998875543 56788
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
+|.|.. +|...+- ..+.++...+.-+.+||++||.|||+. +|.||||||.|.|++.+..+||+|||+++.-.
T Consensus 136 TELmQS-DLHKIIV----SPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee 207 (449)
T KOG0664|consen 136 TELMQS-DLHKIIV----SPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWD 207 (449)
T ss_pred HHHHHh-hhhheec----cCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccc
Confidence 998864 7877774 678899999999999999999999999 99999999999999999999999999999887
Q ss_pred CCCccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.++...++..+-|.+|+|||++++. .|+.++||||+|||+.||+.++.-|+
T Consensus 208 ~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQ 259 (449)
T KOG0664|consen 208 QRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQ 259 (449)
T ss_pred hhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhh
Confidence 7777777788899999999999985 58999999999999999999887775
No 345
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.97 E-value=1e-30 Score=270.58 Aligned_cols=199 Identities=26% Similarity=0.410 Sum_probs=166.3
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC-----e
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG-----Q 482 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~ 482 (618)
.++|...+.||+|+||.||+|... +|+.||+|++.... .......+.+|+.++++++||||+++++++.... .
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE-HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 467899999999999999999764 58999999986432 2234566788999999999999999999876543 5
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccc
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~ 562 (618)
.++|+||+++ +|.++++ ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 83 ~~lv~e~~~~-~l~~~~~-----~~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~ 153 (336)
T cd07849 83 VYIVQELMET-DLYKLIK-----TQHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLA 153 (336)
T ss_pred EEEEehhccc-CHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccce
Confidence 7999999974 8877774 35689999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCcc--ccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 563 ALTPNTERQ--VSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
......... ......|++.|+|||.+.+ ..++.++||||+||++|||++|+.||.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~ 211 (336)
T cd07849 154 RIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFP 211 (336)
T ss_pred eeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 765432221 1123578999999998755 568899999999999999999999984
No 346
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.6e-31 Score=251.06 Aligned_cols=202 Identities=25% Similarity=0.396 Sum_probs=173.8
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHH-HHHHHHHHHHhhcC-CCCcccccceEEeeCCeEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQE-EDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~-~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 484 (618)
..++|....+||+|+|..|..+++. ..+.||+|++++......+ .+-.+.|-.+..+. +||.+|-++..|..+..++
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 3467889999999999999999876 4788999999876554332 33345555555544 7999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+|.||+++|+|--+++ ...+++++.++-+...|.-||.|||++ |||.||||.+|||+|.+|++|+.|+|+++.
T Consensus 328 fvieyv~ggdlmfhmq----rqrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke 400 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQ----RQRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKE 400 (593)
T ss_pred EEEEEecCcceeeehh----hhhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhc
Confidence 9999999999987776 345689999999999999999999999 999999999999999999999999999976
Q ss_pred CCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
...+.+ ....++|||.|.|||++.+..|+..+|+|++||+|+||+.|+.||+
T Consensus 401 ~l~~gd-~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfd 452 (593)
T KOG0695|consen 401 GLGPGD-TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD 452 (593)
T ss_pred CCCCCc-ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcc
Confidence 544333 3446899999999999999999999999999999999999999997
No 347
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=1.7e-30 Score=269.87 Aligned_cols=203 Identities=25% Similarity=0.392 Sum_probs=171.2
Q ss_pred hhhhhhhhcCCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC
Q 007107 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH 480 (618)
Q Consensus 402 ~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 480 (618)
...+....++|...+.||+|+||.||+|.. .+|+.||+|+++.........+.+.+|++++++++||||+++++++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 345566778999999999999999999975 4689999999976544444456788899999999999999999988643
Q ss_pred ------CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCc
Q 007107 481 ------GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNP 554 (618)
Q Consensus 481 ------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~ 554 (618)
...+++++++ +++|.++++ ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~ 159 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCEL 159 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCE
Confidence 3467888876 679988775 34589999999999999999999999 99999999999999999999
Q ss_pred EEeeccccccCCCCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 555 HLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 555 kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
||+|||++...... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.
T Consensus 160 kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~ 219 (345)
T cd07877 160 KILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 219 (345)
T ss_pred EEeccccccccccc----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 99999998754321 223567889999999866 567889999999999999999999985
No 348
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.97 E-value=6.4e-31 Score=261.64 Aligned_cols=189 Identities=26% Similarity=0.411 Sum_probs=157.4
Q ss_pred ceeccCccceEEEEEEcC--------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 416 FLIGEGSLGRVYRAEFAN--------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
+.||+|+||.||+|.... ...+++|.+.... ....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 78 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQ 78 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEE
Confidence 368999999999997642 2347778775432 234567888999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCC--------cEEeec
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN--------PHLSDC 559 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~--------~kl~Df 559 (618)
||+++|+|.++++. ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++. ++++||
T Consensus 79 e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~ 152 (258)
T cd05078 79 EYVKFGSLDTYLKK---NKNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDP 152 (258)
T ss_pred ecCCCCcHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEeccc
Confidence 99999999999863 234688999999999999999999999 9999999999999987765 599999
Q ss_pred cccccCCCCCccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCC-CCCC
Q 007107 560 GLAALTPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGR-KPLD 617 (618)
Q Consensus 560 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~-~Pf~ 617 (618)
|++...... ....+++.|+|||++.+. .++.++||||||+++|||++|. .||.
T Consensus 153 g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~ 207 (258)
T cd05078 153 GISITVLPK-----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLS 207 (258)
T ss_pred ccccccCCc-----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChh
Confidence 988654322 234678899999999874 5789999999999999999984 6653
No 349
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.97 E-value=1e-30 Score=270.75 Aligned_cols=201 Identities=29% Similarity=0.430 Sum_probs=168.7
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeC--CeE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEH--GQR 483 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~--~~~ 483 (618)
..++|+..+.||+|+||.||+|... +|+.+|+|++............+.+|+.+++++ +||||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4567888899999999999999876 588999999865433334455677899999999 999999999988654 368
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++||||++ ++|.++++. ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.
T Consensus 85 ~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~ 155 (337)
T cd07852 85 YLVFEYME-TDLHAVIRA-----NILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLAR 155 (337)
T ss_pred EEEecccc-cCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchh
Confidence 99999997 589888852 2678889999999999999999998 99999999999999999999999999997
Q ss_pred cCCCCCc----cccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTER----QVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
....... .......|+..|+|||++.+ ..++.++||||||+++|||++|+.||.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~ 214 (337)
T cd07852 156 SLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFP 214 (337)
T ss_pred ccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCC
Confidence 6543322 12233578999999998865 457889999999999999999999985
No 350
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.97 E-value=2.5e-30 Score=256.78 Aligned_cols=200 Identities=30% Similarity=0.434 Sum_probs=176.3
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC--CeEEEEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQRLLVY 487 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 487 (618)
+|...+.||+|++|.||+|... +++.+++|++..........+.+.+|++.+++++||||+++++.+... ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677789999999999999876 689999999876654455678899999999999999999999999988 8999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++++|.+++.. ...+++..+..++.|+++||+|||+. +++|+||+|+||++++++.++|+|||.+.....
T Consensus 81 e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 81 EYVSGGSLSSLLKK----FGKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred EecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 99999999999863 23789999999999999999999998 999999999999999999999999999977654
Q ss_pred CCcc-ccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||+
T Consensus 154 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 204 (260)
T cd06606 154 IETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWS 204 (260)
T ss_pred ccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 3321 1233568889999999998889999999999999999999999986
No 351
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.97 E-value=1.4e-30 Score=266.54 Aligned_cols=202 Identities=25% Similarity=0.375 Sum_probs=166.5
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC------
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG------ 481 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 481 (618)
.++|+..+.||+|+||.||+|... +++.||+|.+............+.+|++++++++||||+++++++...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 457888999999999999999875 5899999988654333333445678999999999999999999987654
Q ss_pred --eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeec
Q 007107 482 --QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (618)
Q Consensus 482 --~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Df 559 (618)
..++||||+++ +|.+++.. ....+++.++..++.|++.||+|||+. +++|+||||+||++++++.+||+||
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~df 163 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSN---KNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADF 163 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcC
Confidence 45999999974 78777752 234689999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCcc---ccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 560 GLAALTPNTERQ---VSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 560 gl~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|++......... ......++..|+|||.+.+. .++.++||||||+++|||++|+.||.
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~ 225 (310)
T cd07865 164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQ 225 (310)
T ss_pred CCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCC
Confidence 999765432211 12234678899999988764 47889999999999999999999985
No 352
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.97 E-value=1.4e-30 Score=269.67 Aligned_cols=200 Identities=28% Similarity=0.427 Sum_probs=169.3
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC-----Ce
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH-----GQ 482 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 482 (618)
.++|...+.||+|+||.||+|... +++.||+|.+............+.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 457888899999999999999765 589999999876443344456677899999999999999999988654 34
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccc
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~ 562 (618)
.++|+||+. ++|.+++. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++
T Consensus 84 ~~lv~e~~~-~~L~~~~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 84 VYIVYELMD-TDLHQIIR----SSQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred EEEEEeCCC-CCHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 799999996 68888875 345689999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 563 ALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
....... .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||.
T Consensus 156 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 210 (337)
T cd07858 156 RTTSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFP 210 (337)
T ss_pred cccCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCC
Confidence 7664332 22334568889999998865 468899999999999999999999985
No 353
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=1.8e-30 Score=262.89 Aligned_cols=200 Identities=28% Similarity=0.402 Sum_probs=169.4
Q ss_pred CCcccceeccCccceEEEEEEc----CCcEEEEEEcCcccc--cHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAAL--SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 483 (618)
+|+..+.||+|++|.||++... +++.||+|.++.... .....+.+.+|++++.++ +||||+++++.+...+..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 3677889999999999999753 578899999875432 122346688899999999 599999999999999999
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++||||+++|+|.+++. ....+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+|||+++
T Consensus 81 ~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~ 153 (288)
T cd05583 81 HLILDYVNGGELFTHLY----QREHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSK 153 (288)
T ss_pred EEEEecCCCCcHHHHHh----hcCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECcccc
Confidence 99999999999999886 235688999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCccccccccccccccCccccccCC--ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTERQVSTQMVGAFGYSAPEFALSGI--YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..............|+..|+|||.+.+.. .+.++||||||+++|||++|+.||.
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~ 209 (288)
T cd05583 154 EFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFT 209 (288)
T ss_pred ccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcc
Confidence 65433332233456889999999987765 7889999999999999999999984
No 354
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.97 E-value=1.1e-30 Score=264.40 Aligned_cols=201 Identities=29% Similarity=0.432 Sum_probs=165.6
Q ss_pred CCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-CCcccccceEEeeCCeEEEEEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 488 (618)
+|...+.||+|+||.||++... +++.+|+|.+...... .....+.+|+..+.++. |+||+++++++..++..+++||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 4556678999999999999765 5899999998754433 45567889999999986 9999999999999999999999
Q ss_pred ecCCCChhhhhhcc-cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 489 YVGNGNLHDMLHFA-DDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 489 ~~~~gsL~~~l~~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
|++. ++.++.... ......+++..+..++.|++.||+|||+.. +|+||||||+||++++++.+||+|||++.....
T Consensus 84 ~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 84 LMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred cccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 9864 665544321 112467899999999999999999999742 899999999999999999999999999875533
Q ss_pred CCccccccccccccccCccccccC---CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSG---IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... ....|++.|+|||++.+. .++.++|||||||++|||++|+.||.
T Consensus 161 ~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 211 (288)
T cd06616 161 SIAK--TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYP 211 (288)
T ss_pred CCcc--ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCch
Confidence 2211 233688899999999876 68999999999999999999999985
No 355
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=1.5e-30 Score=261.98 Aligned_cols=201 Identities=28% Similarity=0.418 Sum_probs=174.4
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCC-CCcccccceEEeeCCeEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 486 (618)
++|...+.||+|++|.||+|... +|+.|++|++..... .....+.+.+|++++++++ ||||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36888889999999999999875 689999999875432 3344567888999999998 99999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+++++|.++++. ...+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++++|||++....
T Consensus 81 ~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 81 LEYAPNGELLQYIRK----YGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred EcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence 999999999999963 34799999999999999999999998 99999999999999999999999999987554
Q ss_pred CCCc-------------------cccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTER-------------------QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~-------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... .......++..|+|||.+....++.++||||||+++|++++|+.||.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~ 223 (280)
T cd05581 154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFR 223 (280)
T ss_pred CccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCC
Confidence 3221 11223467899999999988889999999999999999999999986
No 356
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.97 E-value=2.2e-30 Score=262.57 Aligned_cols=193 Identities=30% Similarity=0.434 Sum_probs=167.8
Q ss_pred ccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCC
Q 007107 414 QEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (618)
Q Consensus 414 ~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 492 (618)
....||+|+||.||++... +|+.||+|++.... ......+.+|+..++.++|+||+++++.+...+..++||||+++
T Consensus 24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 101 (292)
T cd06657 24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 101 (292)
T ss_pred hHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc--hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCC
Confidence 3457999999999999775 68999999885432 33566788999999999999999999999999999999999999
Q ss_pred CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccc
Q 007107 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (618)
Q Consensus 493 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~ 572 (618)
++|.+++. ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||++........ .
T Consensus 102 ~~L~~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~-~ 172 (292)
T cd06657 102 GALTDIVT-----HTRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-R 172 (292)
T ss_pred CcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccccc-c
Confidence 99998874 34578999999999999999999999 999999999999999999999999999865543221 1
Q ss_pred cccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.....|++.|+|||.+.+..++.++|+||+|+++|||++|+.||.
T Consensus 173 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~ 217 (292)
T cd06657 173 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF 217 (292)
T ss_pred ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 233568899999999988889999999999999999999999984
No 357
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-31 Score=262.58 Aligned_cols=207 Identities=27% Similarity=0.400 Sum_probs=170.1
Q ss_pred hhhhcCCcccceeccCccceEEEEEE-cCCcEEEEEEcCccc-ccHHH----HHHHHHHHHHhhcCCCCcccccceEEee
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAA-LSLQE----EDNFLEAVSNMSRLRHPNIVTLAGYCAE 479 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~----~~~~~~e~~~l~~l~h~niv~l~~~~~~ 479 (618)
....++|-....||+|||+.||+|.+ ...+.||||+-.... +..+. .+...+|..+.+.+.||.||++|+++.-
T Consensus 459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl 538 (775)
T KOG1151|consen 459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL 538 (775)
T ss_pred cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee
Confidence 34456788888999999999999954 456778888754332 12111 2345688999999999999999999865
Q ss_pred -CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeec---CCCCcE
Q 007107 480 -HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD---DELNPH 555 (618)
Q Consensus 480 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~---~~~~~k 555 (618)
.+..+.|+|||+|.+|.-+++ ...-+++++++.|+.||+.||.||.+. .|+|||-||||.|||+. .-|.+|
T Consensus 539 DtdsFCTVLEYceGNDLDFYLK----QhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIK 613 (775)
T KOG1151|consen 539 DTDSFCTVLEYCEGNDLDFYLK----QHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIK 613 (775)
T ss_pred ccccceeeeeecCCCchhHHHH----hhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeE
Confidence 567899999999999988886 345689999999999999999999987 46899999999999995 457899
Q ss_pred EeeccccccCCCCCcc------ccccccccccccCccccccC----CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 556 LSDCGLAALTPNTERQ------VSTQMVGAFGYSAPEFALSG----IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 556 l~Dfgl~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|.|||++..++++... ...+..||..|++||.+.-+ +++.|+||||+|||+|..+.|+.||-
T Consensus 614 ITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFG 685 (775)
T KOG1151|consen 614 ITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFG 685 (775)
T ss_pred eeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCC
Confidence 9999999988755432 23456899999999988533 47889999999999999999999994
No 358
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.97 E-value=4.1e-30 Score=263.86 Aligned_cols=196 Identities=31% Similarity=0.493 Sum_probs=167.0
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
+.|...+.||+|+||.||+|... +++.+|+|++..... .......+.+|++.+++++|||++++++++.+....++||
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 34777889999999999999865 588999999864322 3334567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+. |++.+++.. ....+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.+||+|||++.....
T Consensus 105 e~~~-g~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~ 177 (317)
T cd06635 105 EYCL-GSASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASP 177 (317)
T ss_pred eCCC-CCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCC
Confidence 9997 477777642 245689999999999999999999999 999999999999999999999999999865432
Q ss_pred CCccccccccccccccCccccc---cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. ....|++.|+|||++. ...++.++|||||||++|||++|+.||.
T Consensus 178 ~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~ 225 (317)
T cd06635 178 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 225 (317)
T ss_pred c-----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 2 2346888999999984 4568899999999999999999999985
No 359
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=3e-30 Score=267.77 Aligned_cols=197 Identities=23% Similarity=0.369 Sum_probs=168.4
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC-----
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG----- 481 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 481 (618)
..++|+..+.||+|+||.||+|... +|+.||+|++............+.+|++++++++||||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 4567999999999999999999754 6899999998654434444567889999999999999999999887543
Q ss_pred -eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecc
Q 007107 482 -QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (618)
Q Consensus 482 -~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfg 560 (618)
..++||||+ +++|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~-----~~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMK-----HEKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred ceEEEEEecC-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecc
Confidence 458999998 678988875 34689999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++....... ....+++.|+|||.+.+ ..++.++|+||||+++|+|++|+.||.
T Consensus 164 ~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~ 217 (343)
T cd07880 164 LARQTDSEM----TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFK 217 (343)
T ss_pred cccccccCc----cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 997653321 23467889999999876 457899999999999999999999995
No 360
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=1.6e-30 Score=268.55 Aligned_cols=199 Identities=31% Similarity=0.423 Sum_probs=171.8
Q ss_pred CCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC-----eEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG-----QRL 484 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 484 (618)
+|...+.||+|++|.||+|...+ ++.+|+|++..........+.+.+|++.++.++||||+++++++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 47788899999999999998764 899999998765433445677899999999999999999999988765 789
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||++ ++|.++++ ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++..
T Consensus 81 lv~e~~~-~~l~~~l~----~~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 81 IVTELME-TDLHKVIK----SPQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred EEecchh-hhHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 9999998 48888885 234789999999999999999999999 999999999999999999999999999976
Q ss_pred CCCCCc--cccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 565 TPNTER--QVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 565 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
...... .......++..|+|||++.+. .++.++||||||+++|+|++|+.||.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~ 208 (330)
T cd07834 153 VDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFP 208 (330)
T ss_pred ecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcC
Confidence 654321 122345688899999999887 78999999999999999999999995
No 361
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.97 E-value=4.3e-30 Score=256.98 Aligned_cols=190 Identities=23% Similarity=0.343 Sum_probs=158.3
Q ss_pred hcCCccccee--ccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhc-CCCCcccccceEEeeCCeEE
Q 007107 409 TNSFSQEFLI--GEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR-LRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 409 ~~~~~~~~~L--g~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~ 484 (618)
.++|...+.+ |+|+||.||++..+ +++.+|+|.+........ |+..... .+||||+++++.+...+..+
T Consensus 13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-------e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-------EPMVHQLMKDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-------hHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence 3455555555 99999999999765 578899999865432211 1111111 26999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCC-CcEEeeccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL-NPHLSDCGLAA 563 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~-~~kl~Dfgl~~ 563 (618)
+||||+++++|.++++. ...+++.++..++.|+++||+|||+. +++||||||+||+++.++ .++|+|||++.
T Consensus 86 iv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~~ 158 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKK----EGKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCK 158 (267)
T ss_pred EEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCccce
Confidence 99999999999999962 34789999999999999999999999 999999999999999888 99999999987
Q ss_pred cCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..... ....++..|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 159 ~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~ 207 (267)
T PHA03390 159 IIGTP-----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFK 207 (267)
T ss_pred ecCCC-----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 65422 12468899999999999899999999999999999999999995
No 362
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=3.4e-31 Score=288.69 Aligned_cols=199 Identities=30% Similarity=0.423 Sum_probs=163.2
Q ss_pred hhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC----
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH---- 480 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---- 480 (618)
.+-..+|+..+.||+||||.||+++.+ ||+.||||++.... +.+....+.+|++.+++++|||||+++..+.+.
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~ 553 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAEL 553 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcc
Confidence 445678899999999999999999876 89999999998876 666777889999999999999999987654200
Q ss_pred --------------------------------------------------------------------------------
Q 007107 481 -------------------------------------------------------------------------------- 480 (618)
Q Consensus 481 -------------------------------------------------------------------------------- 480 (618)
T Consensus 554 ~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~t 633 (1351)
T KOG1035|consen 554 TVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNT 633 (1351)
T ss_pred ccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccc
Confidence
Q ss_pred -----------------------------------CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHH
Q 007107 481 -----------------------------------GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARAL 525 (618)
Q Consensus 481 -----------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L 525 (618)
..+||-||||+...+.++++... ..-.....++++.+|++||
T Consensus 634 S~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~---~~~~~d~~wrLFreIlEGL 710 (1351)
T KOG1035|consen 634 SDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNH---FNSQRDEAWRLFREILEGL 710 (1351)
T ss_pred cccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcc---cchhhHHHHHHHHHHHHHH
Confidence 12367888888877777775211 1115678899999999999
Q ss_pred HHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC-----------------CCCccccccccccccccCcccc
Q 007107 526 EYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP-----------------NTERQVSTQMVGAFGYSAPEFA 588 (618)
Q Consensus 526 ~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~-----------------~~~~~~~~~~~gt~~y~aPE~~ 588 (618)
+|+|++ |||||||||.||+++++..|||.|||++.... .......++.+||.-|+|||++
T Consensus 711 aYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll 787 (1351)
T KOG1035|consen 711 AYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELL 787 (1351)
T ss_pred HHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHh
Confidence 999999 99999999999999999999999999997511 1111134567999999999999
Q ss_pred ccCC---ccccchhhhHHHHHHHHHh
Q 007107 589 LSGI---YTVKSDVYSFGVVMLELLT 611 (618)
Q Consensus 589 ~~~~---~~~~~DvwSlG~il~ellt 611 (618)
.+.. |+.|+|+||+|||++||+.
T Consensus 788 ~~~~~~~Yn~KiDmYSLGIVlFEM~y 813 (1351)
T KOG1035|consen 788 SDTSSNKYNSKIDMYSLGIVLFEMLY 813 (1351)
T ss_pred cccccccccchhhhHHHHHHHHHHhc
Confidence 7654 9999999999999999985
No 363
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.97 E-value=3.2e-30 Score=266.02 Aligned_cols=196 Identities=25% Similarity=0.357 Sum_probs=162.8
Q ss_pred eeccC--ccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCC
Q 007107 417 LIGEG--SLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (618)
Q Consensus 417 ~Lg~G--~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 493 (618)
.||+| +||+||++.+. +|+.||+|.+..........+.+.+|+.+++.++||||+++++++...+..++|+||+.++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 46666 99999999875 6999999998765545555678899999999999999999999999999999999999999
Q ss_pred ChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCcc--
Q 007107 494 NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ-- 571 (618)
Q Consensus 494 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~-- 571 (618)
++.++++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+.........
T Consensus 85 ~l~~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T cd08226 85 SANSLLKTYF--PEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK 159 (328)
T ss_pred CHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence 9999887432 34588999999999999999999998 9999999999999999999999999865332211100
Q ss_pred ----ccccccccccccCccccccC--CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 572 ----VSTQMVGAFGYSAPEFALSG--IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 572 ----~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
......++..|+|||++.+. .++.++|||||||++|||++|+.||.
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~ 211 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQ 211 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 00112345679999999764 47899999999999999999999996
No 364
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.97 E-value=5.4e-30 Score=258.35 Aligned_cols=195 Identities=28% Similarity=0.391 Sum_probs=161.6
Q ss_pred CcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-CCcccccceEEeeC--CeEEEEE
Q 007107 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEH--GQRLLVY 487 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~ 487 (618)
|+..+.||+|+||.||+|... +++.||+|+++....... .....+|+..+.++. |+||+++++++.+. +..++||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~-~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE-QVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch-hhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence 456778999999999999765 589999999876543322 233457788888885 99999999999887 8899999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||++ +++.+++.. ....+++.++..++.|++.||+|||+. +++||||+|+||++++ +.+||+|||++.....
T Consensus 80 e~~~-~~l~~~l~~---~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~ 151 (282)
T cd07831 80 ELMD-MNLYELIKG---RKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYS 151 (282)
T ss_pred ecCC-ccHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccccccc
Confidence 9997 578777753 235689999999999999999999999 9999999999999999 9999999999976543
Q ss_pred CCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... ....++..|+|||++.. ..++.++|||||||++|||++|+.||.
T Consensus 152 ~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~ 200 (282)
T cd07831 152 KPPY--TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFP 200 (282)
T ss_pred CCCc--CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCC
Confidence 2221 23467889999997754 557889999999999999999999995
No 365
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=2e-30 Score=265.42 Aligned_cols=202 Identities=29% Similarity=0.417 Sum_probs=166.0
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC------
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG------ 481 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 481 (618)
.++|+..+.||+|++|.||+|... +++.+|+|++............+.+|++++++++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468899999999999999999865 5889999998654433333445678999999999999999999875433
Q ss_pred --eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeec
Q 007107 482 --QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (618)
Q Consensus 482 --~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Df 559 (618)
..++|+||++. ++.+.+.. ....+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~---~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLEN---PSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcC
Confidence 46999999975 67666642 345799999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCcc----------ccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 560 GLAALTPNTERQ----------VSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 560 gl~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|+++........ ......+++.|+|||.+.+. .++.++|||||||++|||++|+.||+
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~ 228 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQ 228 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCC
Confidence 999755322211 11234678899999988654 57899999999999999999999985
No 366
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.97 E-value=4e-30 Score=263.70 Aligned_cols=195 Identities=22% Similarity=0.305 Sum_probs=162.0
Q ss_pred eeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCCChh
Q 007107 417 LIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLH 496 (618)
Q Consensus 417 ~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 496 (618)
.+|.|+++.||++.. +++.||+|++..........+.+.+|++.++.++|+||+++++++...+..+++|||+++|+|.
T Consensus 9 ~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 87 (314)
T cd08216 9 CFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCE 87 (314)
T ss_pred hhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHH
Confidence 345555555555544 5899999999765445556778999999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCc------
Q 007107 497 DMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER------ 570 (618)
Q Consensus 497 ~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~------ 570 (618)
++++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+........
T Consensus 88 ~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~ 162 (314)
T cd08216 88 DLLKTH--FPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVH 162 (314)
T ss_pred HHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccccccccccc
Confidence 998743 234588899999999999999999999 999999999999999999999999998864432211
Q ss_pred cccccccccccccCccccccC--CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 571 QVSTQMVGAFGYSAPEFALSG--IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.......++..|+|||++.+. .++.++|||||||++|||++|+.||.
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~ 211 (314)
T cd08216 163 DFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFK 211 (314)
T ss_pred cccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence 112234677889999998763 58899999999999999999999996
No 367
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=4e-30 Score=266.77 Aligned_cols=195 Identities=23% Similarity=0.379 Sum_probs=164.7
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC------C
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH------G 481 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 481 (618)
.++|.....||+|+||.||+|... +|+.||+|+++...........+.+|++++++++||||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 467888899999999999999865 589999999875443333345678999999999999999999998654 3
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccc
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl 561 (618)
..++|+||+.. +|.++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 94 ~~~lv~e~~~~-~l~~~~------~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIM------GHPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred eEEEEeccccc-CHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCC
Confidence 46899999964 666554 23588999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.
T Consensus 164 ~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~ 216 (342)
T cd07879 164 ARHADAE----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFK 216 (342)
T ss_pred CcCCCCC----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCC
Confidence 8765322 123567889999999876 468899999999999999999999996
No 368
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=5.1e-30 Score=264.25 Aligned_cols=198 Identities=28% Similarity=0.420 Sum_probs=168.6
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee-CCeEE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQRL 484 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~ 484 (618)
...++|+..+.||+|+||.||+|... +++.||+|++..........+.+..|++++++++||||+++++++.. ....+
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY 86 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence 45678999999999999999999765 68999999986544344455678889999999999999999998866 45788
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+|+||+ +++|.++++ ...+++..+..++.|++.||+|||+. +|+||||+|+||++++++.+||+|||.+..
T Consensus 87 lv~e~~-~~~L~~~~~-----~~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~~ 157 (328)
T cd07856 87 FVTELL-GTDLHRLLT-----SRPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARI 157 (328)
T ss_pred EEeehh-ccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccccc
Confidence 999998 468888875 34578888889999999999999999 999999999999999999999999999875
Q ss_pred CCCCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||.
T Consensus 158 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~ 207 (328)
T cd07856 158 QDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFP 207 (328)
T ss_pred cCCC----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 4321 123467889999998866 568999999999999999999999984
No 369
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.97 E-value=6.5e-30 Score=258.41 Aligned_cols=198 Identities=29% Similarity=0.423 Sum_probs=164.7
Q ss_pred CcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcC---CCCcccccceEEeeCCe-----
Q 007107 412 FSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL---RHPNIVTLAGYCAEHGQ----- 482 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~----- 482 (618)
|+..+.||+|+||.||+|..+. ++.||+|+++...........+.+|+.++.++ +||||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 5667889999999999998875 89999999975443333334555676665544 69999999999988776
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccc
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~ 562 (618)
.+++|||+.+ +|.+++.... ...+++..+..++.|++.||+|||+. +++|+||+|+||++++++.+||+|||.+
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCP--KPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred eEEEehhccc-CHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcc
Confidence 8999999974 8988886322 23689999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 563 ALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
........ .....++..|+|||++.+..++.++|||||||++|||++|+.||+
T Consensus 155 ~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~ 207 (287)
T cd07838 155 RIYSFEMA--LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFR 207 (287)
T ss_pred eeccCCcc--cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCccc
Confidence 76643322 123357889999999999999999999999999999999999985
No 370
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.97 E-value=5.1e-30 Score=258.62 Aligned_cols=198 Identities=29% Similarity=0.417 Sum_probs=170.3
Q ss_pred CcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEec
Q 007107 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYV 490 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 490 (618)
|+..+.||+|++|.||+|... +++.+++|++............+.+|++.+++++|+||+++++++...+..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 456678999999999999875 6889999998766544445667888999999999999999999999999999999999
Q ss_pred CCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCc
Q 007107 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570 (618)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~ 570 (618)
++ ++.+++.. ....+++..+..++.|++.||+|||+. +|+|+||||+||++++++.+||+|||.+........
T Consensus 81 ~~-~l~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~ 153 (283)
T cd05118 81 DT-DLYKLIKD---RQRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR 153 (283)
T ss_pred CC-CHHHHHHh---hcccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc
Confidence 75 88887763 235789999999999999999999999 999999999999999999999999999876654331
Q ss_pred cccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 571 QVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
......++..|+|||.+.+. .++.++||||||+++|+|+||+.||.
T Consensus 154 -~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~ 200 (283)
T cd05118 154 -PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFP 200 (283)
T ss_pred -cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence 12234678899999999876 78999999999999999999999984
No 371
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=3.3e-31 Score=248.25 Aligned_cols=193 Identities=24% Similarity=0.320 Sum_probs=161.4
Q ss_pred cCCcc-cceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEee----CCe
Q 007107 410 NSFSQ-EFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAE----HGQ 482 (618)
Q Consensus 410 ~~~~~-~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----~~~ 482 (618)
++|.+ .++||-|-.|.|..+.++ .|+++|+|++.+. ...++|++..-.. .|||||.++++|+. ...
T Consensus 61 edY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 61 EDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-------PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred hhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 34443 257999999999999765 5899999988632 3346777764333 79999999998865 357
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeec---CCCCcEEeec
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD---DELNPHLSDC 559 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~---~~~~~kl~Df 559 (618)
+.+|||.|+||.|++.++.. ..+.+++.++..|+.||+.|+.|||+. +|.||||||+|+|.+ .+-.+||+||
T Consensus 134 LLiVmE~meGGeLfsriq~~--g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDf 208 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDR--GDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDF 208 (400)
T ss_pred eEeeeecccchHHHHHHHHc--ccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEeccc
Confidence 78999999999999988743 456799999999999999999999999 999999999999997 4557899999
Q ss_pred cccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCC
Q 007107 560 GLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 560 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf 616 (618)
|+|+..... ......+-||.|.|||++...+|+...|+||+||+||-|+.|.+||
T Consensus 209 GFAK~t~~~--~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPF 263 (400)
T KOG0604|consen 209 GFAKETQEP--GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263 (400)
T ss_pred ccccccCCC--ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcc
Confidence 999866432 2234468899999999999999999999999999999999999998
No 372
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.3e-30 Score=283.78 Aligned_cols=208 Identities=29% Similarity=0.483 Sum_probs=176.3
Q ss_pred hhhhcCCcccceeccCccceEEEEEEc--------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceE
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEFA--------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGY 476 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~ 476 (618)
+...++..+.+.||+|.||.|++|... ....||||.++..... .+.+.+..|+++|..+ +|+||+.++|+
T Consensus 292 e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~ 370 (609)
T KOG0200|consen 292 EIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGA 370 (609)
T ss_pred eechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheee
Confidence 344445556669999999999999643 1457999999877755 6788999999999998 59999999999
Q ss_pred EeeCCeEEEEEEecCCCChhhhhhccc---C-------CC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCC
Q 007107 477 CAEHGQRLLVYEYVGNGNLHDMLHFAD---D-------SS--KNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSA 544 (618)
Q Consensus 477 ~~~~~~~~lv~e~~~~gsL~~~l~~~~---~-------~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~ 544 (618)
|...+..++|+||+..|+|.++++..+ . .. ..+...+.+.++.|||.|++||++. ++|||||..+
T Consensus 371 ~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaR 447 (609)
T KOG0200|consen 371 CTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAAR 447 (609)
T ss_pred eccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhhhh
Confidence 999999999999999999999998665 1 01 1388899999999999999999999 9999999999
Q ss_pred CeeecCCCCcEEeeccccccCCCCCcccccccc--ccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 545 NILLDDELNPHLSDCGLAALTPNTERQVSTQMV--GAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 545 NiLl~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
|||++++..+||+|||+++.......+....-. -+..|||||.+....|+.|+|||||||++|||+| |..|+-
T Consensus 448 NVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp 523 (609)
T KOG0200|consen 448 NVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYP 523 (609)
T ss_pred hEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCC
Confidence 999999999999999999976554444333223 2457999999999999999999999999999999 888874
No 373
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=9.2e-30 Score=263.06 Aligned_cols=199 Identities=27% Similarity=0.350 Sum_probs=164.0
Q ss_pred CCcccceeccCccceEEEEEEc-C--CcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeC----Ce
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFA-N--GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEH----GQ 482 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~-~--g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~----~~ 482 (618)
+|...+.||+|+||.||++... . +..||+|++..........+.+.+|+++++++ +||||+++++.+... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4677889999999999999875 3 67899999875433333456778899999988 599999999875432 45
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccc
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~ 562 (618)
.++++||++ ++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 81 ~~~~~e~~~-~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 81 LYLYEELME-ADLHQIIR----SGQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred EEEEEeccc-CCHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 788899886 58988885 345689999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCc---cccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 563 ALTPNTER---QVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
........ .......|+..|+|||++.+ ..++.++||||+||++|+|++|+.||.
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~ 211 (332)
T cd07857 153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFK 211 (332)
T ss_pred eecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCC
Confidence 76543221 11233578999999998766 468999999999999999999999985
No 374
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.97 E-value=1.4e-29 Score=257.49 Aligned_cols=201 Identities=28% Similarity=0.462 Sum_probs=165.1
Q ss_pred hhcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 485 (618)
..++|+..+.||+|++|.||+|.+.+ ++.||+|.++..... .....+..|++.+.+. .||||+++++++.+....++
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 91 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK-EENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFI 91 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh-HHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEE
Confidence 34678888999999999999998875 899999998754322 2344566677666665 59999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||++ +++.++... ....+++..+..++.|++.||+|||+.. +|+||||+|+||++++++.+||+|||++...
T Consensus 92 v~e~~~-~~l~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~ 165 (296)
T cd06618 92 CMELMS-TCLDKLLKR---IQGPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRL 165 (296)
T ss_pred EeeccC-cCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhc
Confidence 999985 477776643 2347899999999999999999999742 8999999999999999999999999998765
Q ss_pred CCCCccccccccccccccCccccccCC----ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGI----YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
...... ....++..|+|||.+.+.. ++.++||||||+++|||++|+.||.
T Consensus 166 ~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 219 (296)
T cd06618 166 VDSKAK--TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYK 219 (296)
T ss_pred cCCCcc--cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCC
Confidence 432221 2235788999999987654 7889999999999999999999985
No 375
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=2.5e-29 Score=257.48 Aligned_cols=194 Identities=31% Similarity=0.494 Sum_probs=164.8
Q ss_pred CcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
|...+.||+|+||.||+|... +|+.|++|++..... .......+.+|++.++.++|||++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 566678999999999999765 588999999864432 233446788899999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+. |++.+++.. ....+++.++..++.|++.|++|||+. +++||||+|+||++++++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~---~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-- 173 (313)
T cd06633 103 CL-GSASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP-- 173 (313)
T ss_pred CC-CCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC--
Confidence 96 577777652 245689999999999999999999999 999999999999999999999999998854322
Q ss_pred ccccccccccccccCccccc---cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.....|+..|+|||++. ...++.++|||||||++|||++|+.||.
T Consensus 174 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~ 221 (313)
T cd06633 174 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 221 (313)
T ss_pred ---CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 12356889999999984 4568889999999999999999999985
No 376
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=7.4e-30 Score=254.24 Aligned_cols=202 Identities=23% Similarity=0.335 Sum_probs=167.7
Q ss_pred CCcccceeccCccceEEEEEEcC-CcEEEEEEcCc---ccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDN---AALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~---~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
+|...+.||+|+||.||++.... +..+++|.++. .........++..|+.++++++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 47788899999999999997654 34444454432 222333445677889999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
+||+++++|.++++........+++..+..++.|++.|++|||+. +++|+||+|+||++++ +.+||+|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999998875544566799999999999999999999998 9999999999999976 469999999987654
Q ss_pred CCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... ......|++.|+|||.+.+..++.++|+||||+++|+|++|+.||+
T Consensus 157 ~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~ 206 (260)
T cd08222 157 GSCD-LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFE 206 (260)
T ss_pred CCcc-cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 3222 2223567889999999988888999999999999999999999986
No 377
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=6.9e-30 Score=265.10 Aligned_cols=197 Identities=24% Similarity=0.406 Sum_probs=168.7
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCe----
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ---- 482 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---- 482 (618)
..++|...+.||+|++|.||+|... +++.||+|++............+.+|+.++++++||||+++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4567889999999999999999876 57899999987554344445667889999999999999999998766554
Q ss_pred --EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecc
Q 007107 483 --RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (618)
Q Consensus 483 --~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfg 560 (618)
.++|+||+ +++|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~-----~~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVK-----CQKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred ccEEEEEecC-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccc
Confidence 89999998 569998885 35689999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++...... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.
T Consensus 164 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~ 217 (343)
T cd07851 164 LARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFP 217 (343)
T ss_pred cccccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 99765432 223467889999999865 367899999999999999999999985
No 378
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=1.8e-29 Score=249.77 Aligned_cols=192 Identities=31% Similarity=0.451 Sum_probs=167.8
Q ss_pred eccCccceEEEEEEc-CCcEEEEEEcCccccc-HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCCCh
Q 007107 418 IGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNL 495 (618)
Q Consensus 418 Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 495 (618)
||+|+||.||++... +++.+++|.+...... ......+.+|++++++++||||+++++.+...+..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999876 4899999998755432 23456788999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCcccccc
Q 007107 496 HDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQ 575 (618)
Q Consensus 496 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~~~~ 575 (618)
.+++.. ...+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||.+....... .....
T Consensus 81 ~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~ 152 (250)
T cd05123 81 FSHLSK----EGRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNT 152 (250)
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccC
Confidence 999862 34689999999999999999999998 99999999999999999999999999987654332 12234
Q ss_pred ccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 576 MVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 576 ~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..++..|+|||.+.+...+.++|+||||+++|||++|+.||+
T Consensus 153 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~ 194 (250)
T cd05123 153 FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFY 194 (250)
T ss_pred CcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 568889999999988888999999999999999999999995
No 379
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-30 Score=263.45 Aligned_cols=197 Identities=22% Similarity=0.370 Sum_probs=169.3
Q ss_pred cCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHH------HHHHHHHHHhhcCC---CCcccccceEEee
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEE------DNFLEAVSNMSRLR---HPNIVTLAGYCAE 479 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~------~~~~~e~~~l~~l~---h~niv~l~~~~~~ 479 (618)
.+|...+.+|+|+||.|+.|.++. ..+|+||.+.+...-...+ -..-.|+++|..++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 458899999999999999998764 6788999887654322211 12346899998887 9999999999999
Q ss_pred CCeEEEEEEecCCC-ChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEee
Q 007107 480 HGQRLLVYEYVGNG-NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSD 558 (618)
Q Consensus 480 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~D 558 (618)
++.+||+||....| +|++++.+ ...+++.++..|+.|++.|+++||++ +|||||||-+||.++.+|-+||+|
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~----kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klid 713 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEF----KPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLID 713 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhc----cCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEee
Confidence 99999999987654 99999963 56789999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCccccccccccccccCccccccCCc-cccchhhhHHHHHHHHHhCCCCC
Q 007107 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 559 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~Pf 616 (618)
||.+....+.. ...++||..|.|||++.+.+| +..-|||++|+++|.++..+.||
T Consensus 714 fgsaa~~ksgp---fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpy 769 (772)
T KOG1152|consen 714 FGSAAYTKSGP---FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPY 769 (772)
T ss_pred ccchhhhcCCC---cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCC
Confidence 99997765433 245789999999999999998 45689999999999999999997
No 380
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=1.4e-29 Score=258.77 Aligned_cols=197 Identities=33% Similarity=0.491 Sum_probs=166.5
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCccc-ccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAA-LSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
.+.|...+.||+|++|.||+|... +++.+++|.+.... .......++.+|+++++.++|+|++++++++......++|
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 93 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 93 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEE
Confidence 344777788999999999999875 57889999886432 2333456788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+. |++.+++.. ....+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.+||+|||++....
T Consensus 94 ~e~~~-~~l~~~~~~---~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 166 (308)
T cd06634 94 MEYCL-GSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166 (308)
T ss_pred EEccC-CCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeec
Confidence 99996 578777642 234588999999999999999999998 99999999999999999999999999987554
Q ss_pred CCCccccccccccccccCccccc---cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. ....+++.|+|||.+. ...++.++|||||||++|||++|+.||.
T Consensus 167 ~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 215 (308)
T cd06634 167 PA-----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 215 (308)
T ss_pred Cc-----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCc
Confidence 32 2346788999999975 3567889999999999999999999985
No 381
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.96 E-value=1.9e-29 Score=254.62 Aligned_cols=197 Identities=28% Similarity=0.438 Sum_probs=166.1
Q ss_pred CcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-CCcccccceEEeeCCeEEEEEEe
Q 007107 412 FSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
|...+.||+|++|.||+|...+ ++.|++|++...... .......+|+..+++++ |+||+++++++...+..++||||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 79 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEY 79 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence 5567789999999999998864 788999998754432 23334557888999998 99999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+ +|+|.+++.... ...+++..+..++.|++.+|.|||+. +++|+||+|+||++++++.++|+|||++.......
T Consensus 80 ~-~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (283)
T cd07830 80 M-EGNLYQLMKDRK--GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP 153 (283)
T ss_pred C-CCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCC
Confidence 9 789988886322 34689999999999999999999998 99999999999999999999999999997654322
Q ss_pred ccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. ....++..|+|||++.+ ..++.++|+||||+++|||++|+.||.
T Consensus 154 ~~--~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~ 200 (283)
T cd07830 154 PY--TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFP 200 (283)
T ss_pred Cc--CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccC
Confidence 21 23467889999998854 557899999999999999999999984
No 382
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.96 E-value=1.2e-29 Score=255.85 Aligned_cols=198 Identities=30% Similarity=0.433 Sum_probs=169.5
Q ss_pred CcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEec
Q 007107 412 FSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYV 490 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 490 (618)
|+..+.||+|++|.||+|.... ++.+++|.+..........+.+..|++.+++++|+||+++++++.+.+..++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 4556789999999999998764 899999999865433334567788999999999999999999999999999999999
Q ss_pred CCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCc
Q 007107 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570 (618)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~ 570 (618)
+ ++|.+++... ...+++..+..++.|++.||+|||+. +|+||||+|+||++++++.+||+|||.+........
T Consensus 81 ~-~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 81 D-MDLKKYLDKR---PGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred C-cCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 8 5899999732 24689999999999999999999999 999999999999999999999999999876643322
Q ss_pred cccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 571 QVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. .....++..|+|||.+.+. .++.++||||||+++|||++|+.||.
T Consensus 154 ~-~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~ 200 (282)
T cd07829 154 T-YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFP 200 (282)
T ss_pred c-cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 1 2234567789999999776 78999999999999999999999985
No 383
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.96 E-value=1.5e-29 Score=261.94 Aligned_cols=200 Identities=27% Similarity=0.380 Sum_probs=164.8
Q ss_pred cCCc-ccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHH------------HHHHHHHHHHHhhcCCCCcccccce
Q 007107 410 NSFS-QEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQ------------EEDNFLEAVSNMSRLRHPNIVTLAG 475 (618)
Q Consensus 410 ~~~~-~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~------------~~~~~~~e~~~l~~l~h~niv~l~~ 475 (618)
++|. ..+.||+|+||.||+|... +++.||+|++........ ....+.+|++++++++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 3454 3467999999999999865 589999999865432210 0124678999999999999999999
Q ss_pred EEeeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcE
Q 007107 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPH 555 (618)
Q Consensus 476 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~k 555 (618)
++...+..++||||++ |+|.+++. ....+++.....++.|++.||+|||+. +|+||||+|+||+++.++.+|
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~----~~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVD----RKIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICK 159 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEE
Confidence 9999999999999997 58988885 345689999999999999999999998 999999999999999999999
Q ss_pred EeeccccccCCCC-------------CccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 556 LSDCGLAALTPNT-------------ERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 556 l~Dfgl~~~~~~~-------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|+|||++...... .........+++.|+|||.+.+. .++.++|||||||++|||++|+.||.
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~ 235 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFP 235 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999998755411 01111223568899999998764 46899999999999999999999985
No 384
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.96 E-value=2.6e-29 Score=280.92 Aligned_cols=147 Identities=27% Similarity=0.399 Sum_probs=131.3
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
++|.+.+.||+|+||.||+|.+. +++.||+|+++.... .......+..|+.++..++||||+++++++...+..++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57888999999999999999876 589999999875432 3334567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
||+.+++|.++++. .+.+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~----~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHI----YGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999863 34678899999999999999999998 99999999999999999999999999875
No 385
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.96 E-value=1.9e-29 Score=261.72 Aligned_cols=197 Identities=27% Similarity=0.380 Sum_probs=163.0
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC--------
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH-------- 480 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-------- 480 (618)
.+|...+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDV 82 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccc
Confidence 57888999999999999999775 588999999865432 3456788899999999999999999876554
Q ss_pred ------CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeec-CCCC
Q 007107 481 ------GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD-DELN 553 (618)
Q Consensus 481 ------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~-~~~~ 553 (618)
...++||||++ ++|.+++. ...+++..++.++.|++.||+|||+. +|+||||||+||+++ +++.
T Consensus 83 ~~~~~~~~~~lv~e~~~-~~L~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~ 153 (342)
T cd07854 83 GSLTELNSVYIVQEYME-TDLANVLE-----QGPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLV 153 (342)
T ss_pred ccccccceEEEEeeccc-ccHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCce
Confidence 35789999997 58888774 34688999999999999999999999 999999999999998 4567
Q ss_pred cEEeeccccccCCCCCcc--ccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 554 PHLSDCGLAALTPNTERQ--VSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 554 ~kl~Dfgl~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+||+|||.+......... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||.
T Consensus 154 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~ 220 (342)
T cd07854 154 LKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFA 220 (342)
T ss_pred EEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCC
Confidence 899999999765332211 1122357889999998755 557889999999999999999999995
No 386
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-29 Score=268.06 Aligned_cols=208 Identities=27% Similarity=0.469 Sum_probs=175.4
Q ss_pred hhhhhhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEee
Q 007107 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAE 479 (618)
Q Consensus 402 ~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 479 (618)
+..+...+..|++.+.||.|.+|.||+++.. +++..|+|+..... ...+++..|..+++.. .|||++.++|++..
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~---d~deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE---DEEEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc---cccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 3445556778899999999999999999654 58888888876443 2344556677777766 69999999999864
Q ss_pred -----CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCc
Q 007107 480 -----HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNP 554 (618)
Q Consensus 480 -----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~ 554 (618)
++++|||||||.+|+..|+++... +..+.|..+..|+..+++|+.+||.. .++|||+|-.|||++.++.|
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~V 162 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEV 162 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcE
Confidence 468999999999999999998654 77899999999999999999999999 99999999999999999999
Q ss_pred EEeeccccccCCCCCccccccccccccccCccccccC-----CccccchhhhHHHHHHHHHhCCCCCCC
Q 007107 555 HLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSG-----IYTVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 555 kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
|++|||.+........ .....+|||.|||||++... .|+.++|+||||++..||--|.+|+.+
T Consensus 163 KLvDFGvSaQldsT~g-rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~D 230 (953)
T KOG0587|consen 163 KLVDFGVSAQLDSTVG-RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCD 230 (953)
T ss_pred EEeeeeeeeeeecccc-cccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccC
Confidence 9999999987765433 33456899999999999643 477889999999999999999999864
No 387
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=2.2e-31 Score=243.56 Aligned_cols=201 Identities=25% Similarity=0.411 Sum_probs=164.5
Q ss_pred cCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC--------
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH-------- 480 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-------- 480 (618)
..|+....+|+|.||.||+|+..+ |+.||+|++--..........-++|+++++.++|+|++.+++.|...
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 456677789999999999998764 77788887643222222334567899999999999999999988542
Q ss_pred CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecc
Q 007107 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (618)
Q Consensus 481 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfg 560 (618)
...++|+++|+. +|.-++. +...+++..++.+++.++..||.|+|+. .|+|||+||.|+||+.+|.+||+|||
T Consensus 97 ~t~ylVf~~ceh-DLaGlLs---n~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFG 169 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLS---NRKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFG 169 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhc---CccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccc
Confidence 357999999975 8888885 3346799999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCc---cccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTER---QVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+++.+..... ...+..+-|..|++||.+.+ +.|+++.|||+-||||.||.||.+-|+
T Consensus 170 lar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimq 230 (376)
T KOG0669|consen 170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQ 230 (376)
T ss_pred cccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCcccc
Confidence 9976543222 22334567999999999987 569999999999999999999987654
No 388
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.96 E-value=5.1e-29 Score=244.62 Aligned_cols=179 Identities=23% Similarity=0.277 Sum_probs=151.5
Q ss_pred CccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCCChhhhh
Q 007107 421 GSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDML 499 (618)
Q Consensus 421 G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l 499 (618)
|.+|.||++... +++.||+|++.... .+.+|...+....||||+++++++...+..++||||+++|+|.+++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 76 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHI 76 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHH
Confidence 899999999765 58999999986542 1223334444557999999999999999999999999999999988
Q ss_pred hcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCcccccccccc
Q 007107 500 HFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQMVGA 579 (618)
Q Consensus 500 ~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt 579 (618)
.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++|||.+...... .....++
T Consensus 77 ~~----~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~ 145 (237)
T cd05576 77 SK----FLNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVE 145 (237)
T ss_pred HH----hcCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcC
Confidence 63 34589999999999999999999998 9999999999999999999999999987655332 1223456
Q ss_pred ccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 580 FGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 580 ~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..|+|||.+.+..++.++||||+|+++|||++|+.||+
T Consensus 146 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~ 183 (237)
T cd05576 146 NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVE 183 (237)
T ss_pred ccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhh
Confidence 78999999988889999999999999999999998875
No 389
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=1.8e-28 Score=260.80 Aligned_cols=208 Identities=18% Similarity=0.260 Sum_probs=154.1
Q ss_pred hhhcCCcccceeccCccceEEEEEE-----------------cCCcEEEEEEcCcccccHH------------HHHHHHH
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEF-----------------ANGKIMAVKKIDNAALSLQ------------EEDNFLE 457 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~-----------------~~g~~vavK~~~~~~~~~~------------~~~~~~~ 457 (618)
...++|++.++||+|+||.||+|.. ..++.||||++........ ..+....
T Consensus 142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence 4567899999999999999999964 2356899999864321100 1112334
Q ss_pred HHHHhhcCCCCcc-----cccceEEee--------CCeEEEEEEecCCCChhhhhhcccC--------------------
Q 007107 458 AVSNMSRLRHPNI-----VTLAGYCAE--------HGQRLLVYEYVGNGNLHDMLHFADD-------------------- 504 (618)
Q Consensus 458 e~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~-------------------- 504 (618)
|+.++.+++|.++ ++++++|.. .+..++||||+++++|.++++....
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 6666666766554 677777753 3568999999999999999863211
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccccccccccccccC
Q 007107 505 SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSA 584 (618)
Q Consensus 505 ~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~a 584 (618)
....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++...............+|+.|+|
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~a 378 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSP 378 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeC
Confidence 112356788899999999999999999 99999999999999999999999999997654322222222345789999
Q ss_pred ccccccCC--------------------cc--ccchhhhHHHHHHHHHhCCC-CCC
Q 007107 585 PEFALSGI--------------------YT--VKSDVYSFGVVMLELLTGRK-PLD 617 (618)
Q Consensus 585 PE~~~~~~--------------------~~--~~~DvwSlG~il~elltg~~-Pf~ 617 (618)
||.+.... |+ .+.||||+||++|||++|.. ||+
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~ 434 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVA 434 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence 99986432 11 24799999999999999986 664
No 390
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.6e-29 Score=259.36 Aligned_cols=191 Identities=29% Similarity=0.357 Sum_probs=160.3
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 486 (618)
...|.....+|.|+|+.|..+... .++..++|++.+.... -.+|+.++... +||||+++.+.+.+..+.|+|
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~------~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v 394 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADD------NQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLV 394 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccccc------cccccchhhhhcCCCcceeecceecCCceeeee
Confidence 566777788999999999998665 5888999999765322 23455444443 799999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeee-cCCCCcEEeeccccccC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL-DDELNPHLSDCGLAALT 565 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl-~~~~~~kl~Dfgl~~~~ 565 (618)
||.+.++-+.+.+.. ...+. ..+..|+.+|+.|+.|||++ |||||||||+|||+ ++.++++|+|||.++..
T Consensus 395 ~e~l~g~ell~ri~~----~~~~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~ 466 (612)
T KOG0603|consen 395 MELLDGGELLRRIRS----KPEFC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSEL 466 (612)
T ss_pred ehhccccHHHHHHHh----cchhH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhC
Confidence 999999988777752 22233 67778999999999999998 99999999999999 59999999999999877
Q ss_pred CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... ....+-|..|.|||++....|++++||||||++||+|++|+.||+
T Consensus 467 ~~~----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~ 514 (612)
T KOG0603|consen 467 ERS----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFA 514 (612)
T ss_pred chh----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccc
Confidence 544 223466889999999999999999999999999999999999996
No 391
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.96 E-value=1e-27 Score=232.84 Aligned_cols=199 Identities=32% Similarity=0.491 Sum_probs=171.0
Q ss_pred CcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEec
Q 007107 412 FSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYV 490 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 490 (618)
|...+.||+|++|.||++...+ ++.+++|.+...... +..+.+.+|++.+++++|+|++++++++......++++||+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEecc
Confidence 4556789999999999998875 889999999765433 24678889999999999999999999999999999999999
Q ss_pred CCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCc
Q 007107 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570 (618)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~ 570 (618)
++++|.+++.... ..+++..+..++.++++++.+||+. +++|+|++|+||+++.++.++|+|||.+........
T Consensus 80 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~ 153 (225)
T smart00221 80 EGGDLFDYLRKKG---GKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA 153 (225)
T ss_pred CCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc
Confidence 9999999986321 1178999999999999999999999 999999999999999999999999999977654321
Q ss_pred cccccccccccccCcccc-ccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 571 QVSTQMVGAFGYSAPEFA-LSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.......++..|++||.+ ....++.++|||+||+++|||++|+.||+
T Consensus 154 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~ 201 (225)
T smart00221 154 ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFS 201 (225)
T ss_pred ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence 122335678889999998 66778889999999999999999999995
No 392
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.95 E-value=8.8e-28 Score=262.08 Aligned_cols=201 Identities=21% Similarity=0.277 Sum_probs=144.5
Q ss_pred hhcCCcccceeccCccceEEEEEEcC-----CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceE------
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY------ 476 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~------ 476 (618)
..++|...+.||+|+||.||+|.+.+ +..||+|++..... .+....+ .+....+.++..+...
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~----~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~ 203 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA----VEIWMNE--RVRRACPNSCADFVYGFLEPVS 203 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch----hHHHHHH--HHHhhchhhHHHHHHhhhcccc
Confidence 45689999999999999999998754 68999998764221 1111111 1122223333322221
Q ss_pred EeeCCeEEEEEEecCCCChhhhhhcccCC----------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecC
Q 007107 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDS----------------SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRN 540 (618)
Q Consensus 477 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~D 540 (618)
.......++|+||+++++|.++++..... ........+..++.|++.||+|||++ +|+|||
T Consensus 204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRD 280 (566)
T PLN03225 204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRD 280 (566)
T ss_pred cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCc
Confidence 23456889999999999999988632110 01112344667999999999999999 999999
Q ss_pred CCCCCeeecC-CCCcEEeeccccccCCCCCccccccccccccccCccccccC----------------------Cccccc
Q 007107 541 FKSANILLDD-ELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSG----------------------IYTVKS 597 (618)
Q Consensus 541 lkp~NiLl~~-~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~ 597 (618)
|||+|||+++ ++.+||+|||+++..............+++.|+|||.+... .++.++
T Consensus 281 LKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 281 VKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred CCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 9999999985 57999999999986654444444557899999999976422 234567
Q ss_pred hhhhHHHHHHHHHhCCCCCC
Q 007107 598 DVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 598 DvwSlG~il~elltg~~Pf~ 617 (618)
|||||||++|||+++..|++
T Consensus 361 DVwSlGviL~el~~~~~~~~ 380 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSD 380 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCc
Confidence 99999999999999887764
No 393
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.95 E-value=9.7e-29 Score=239.70 Aligned_cols=205 Identities=22% Similarity=0.364 Sum_probs=169.0
Q ss_pred eehhhhhhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCC--Cc----ccc
Q 007107 400 YTVASLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH--PN----IVT 472 (618)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~n----iv~ 472 (618)
+.+.......++|.+...+|+|.||.|-.+... .+..||+|+++... ...+.-+-|+++++++.+ |+ ++.
T Consensus 79 ~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~---kYreAa~iEi~vLqki~~~DP~g~~rcv~ 155 (415)
T KOG0671|consen 79 YVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD---KYREAALIEIEVLQKINESDPNGKFRCVQ 155 (415)
T ss_pred EEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH---HHhhHHHHHHHHHHHHHhcCCCCceEEEe
Confidence 444455566889999999999999999999654 47889999987432 223445667888888832 22 788
Q ss_pred cceEEeeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC--
Q 007107 473 LAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-- 550 (618)
Q Consensus 473 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~-- 550 (618)
+.+||+-.++.++|+|.+ |-++.+++.. +...+++...++.++.|++++++|||+. +++|-||||+|||+.+
T Consensus 156 m~~wFdyrghiCivfell-G~S~~dFlk~--N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~ 229 (415)
T KOG0671|consen 156 MRDWFDYRGHICIVFELL-GLSTFDFLKE--NNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSE 229 (415)
T ss_pred eehhhhccCceEEEEecc-ChhHHHHhcc--CCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccc
Confidence 999999999999999988 4599999973 3456788999999999999999999999 9999999999999831
Q ss_pred ------------------CCCcEEeeccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhC
Q 007107 551 ------------------ELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTG 612 (618)
Q Consensus 551 ------------------~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg 612 (618)
...+||+|||.|+...... ...+.|..|+|||++.+-.++.++||||+||||+|++||
T Consensus 230 ~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG 305 (415)
T KOG0671|consen 230 YFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTG 305 (415)
T ss_pred eEEEeccCCccceeccCCCcceEEEecCCcceeccCc----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeecc
Confidence 3457999999997654332 456889999999999999999999999999999999999
Q ss_pred CCCCC
Q 007107 613 RKPLD 617 (618)
Q Consensus 613 ~~Pf~ 617 (618)
..-|.
T Consensus 306 ~~LFq 310 (415)
T KOG0671|consen 306 ETLFQ 310 (415)
T ss_pred ceecc
Confidence 98774
No 394
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.95 E-value=2.1e-28 Score=221.05 Aligned_cols=191 Identities=21% Similarity=0.400 Sum_probs=162.5
Q ss_pred hcCCcccceeccCccceEEEEE-EcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-CCcccccceEEeeCC--eEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHG--QRL 484 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~~~ 484 (618)
.++|++.+.+|+|.++.||.|. ..+.++++||.++.. ..+.+.+|+++++.+. ||||++++++..++. ...
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV-----kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa 111 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV-----KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS 111 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH-----HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence 4578999999999999999996 456888999998743 3567889999999996 999999999998764 568
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC-CCCcEEeeccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-ELNPHLSDCGLAA 563 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~-~~~~kl~Dfgl~~ 563 (618)
||+||+++.+...+.. .++..++..++.+++.||.|+|++ ||+|||+||.|+|||. .-+++|+|.|+|.
T Consensus 112 LiFE~v~n~Dfk~ly~-------tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAE 181 (338)
T KOG0668|consen 112 LIFEYVNNTDFKQLYP-------TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAE 181 (338)
T ss_pred hHhhhhccccHHHHhh-------hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHh
Confidence 9999999988877663 567788899999999999999999 9999999999999994 5579999999998
Q ss_pred cCCCCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCC
Q 007107 564 LTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf 616 (618)
.+...... ...+.+..|--||.+.. ..|+.+-|+|||||++..|+..+.||
T Consensus 182 FYHp~~eY--nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepF 233 (338)
T KOG0668|consen 182 FYHPGKEY--NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 233 (338)
T ss_pred hcCCCcee--eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcc
Confidence 76543322 22356778999999876 55889999999999999999999998
No 395
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=1.3e-28 Score=233.53 Aligned_cols=196 Identities=23% Similarity=0.315 Sum_probs=167.8
Q ss_pred hcCCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC------
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG------ 481 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 481 (618)
..+|.....+|.|.- .|-.|.+ -.++.||+|++..+.......++..+|..++..+.|+||++++.++.-..
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 457777888999988 5555533 35899999999877656666778889999999999999999999986543
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccc
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl 561 (618)
..|+|||+|.. +|.+.++ -+++..++..+..|++.|++|||+. +|+||||||+||++..+..+||.|||+
T Consensus 95 e~y~v~e~m~~-nl~~vi~------~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ 164 (369)
T KOG0665|consen 95 EVYLVMELMDA-NLCQVIL------MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGL 164 (369)
T ss_pred hHHHHHHhhhh-HHHHHHH------HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchh
Confidence 56999999964 8988886 4578889999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++..... -..+.++.|..|+|||++.+-.|.+.+||||+||++.||++|+.-|.
T Consensus 165 ar~e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~ 218 (369)
T KOG0665|consen 165 ARTEDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFP 218 (369)
T ss_pred hcccCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEec
Confidence 9765432 35566889999999999999889999999999999999999987653
No 396
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.95 E-value=9.6e-27 Score=228.42 Aligned_cols=186 Identities=37% Similarity=0.567 Sum_probs=163.3
Q ss_pred ccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCCChhhhhh
Q 007107 422 SLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLH 500 (618)
Q Consensus 422 ~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~ 500 (618)
+||.||+|...+ |+.+++|++........ .+.+.+|++.+++++|+||+++++++......++++||+++++|.+++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence 589999998874 89999999976543321 5788999999999999999999999999999999999999999999986
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccccccccccc
Q 007107 501 FADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQMVGAF 580 (618)
Q Consensus 501 ~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~ 580 (618)
. ...+++..+..++.++++++.|||+. +++|+||+|+||++++++.++|+|||.+....... ......++.
T Consensus 80 ~----~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~ 150 (244)
T smart00220 80 K----RGRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTP 150 (244)
T ss_pred h----ccCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCc
Confidence 3 22388999999999999999999999 99999999999999999999999999997765432 223456888
Q ss_pred cccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 581 GYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 581 ~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.|++||.+.+..++.++||||||+++|+|++|+.||+
T Consensus 151 ~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~ 187 (244)
T smart00220 151 EYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFP 187 (244)
T ss_pred CCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 9999999998889999999999999999999999985
No 397
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.94 E-value=8.4e-27 Score=274.54 Aligned_cols=220 Identities=30% Similarity=0.546 Sum_probs=143.7
Q ss_pred hccCCChHHHHHHHHHHHhCCCCC-CCCCCCCCCCCCCCCCCceeEeeC-CCEEEEEcCCCCCcccccccccCCCCCCEE
Q 007107 35 VQCTTDSSDVQALQVLYTSLNSPS-VLTNWKGNEGDPCGESWKGVACEG-SAVVSIDISGLGLSGTMGYLLSDLLSLRKF 112 (618)
Q Consensus 35 ~~~~~~~~~~~al~~~~~~~~~~~-~~~~w~~~~~~~c~~~w~gv~c~~-~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L 112 (618)
..+..+++|.+||++||++++++. .+.+|+. ..++| .|.||.|+. ++|+.|+|++|+++|.++..+..+++|+.|
T Consensus 22 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~-~~~~c--~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L 98 (968)
T PLN00113 22 NFSMLHAEELELLLSFKSSINDPLKYLSNWNS-SADVC--LWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTI 98 (968)
T ss_pred HccCCCHHHHHHHHHHHHhCCCCcccCCCCCC-CCCCC--cCcceecCCCCcEEEEEecCCCccccCChHHhCCCCCCEE
Confidence 334457799999999999998764 6789974 34666 899999974 689999999999999888888888888888
Q ss_pred eecCCCCCCCCCCCCC---CCcceEecccccccc----------------------cCCcccccCCCccEEEeecCCCCC
Q 007107 113 DLSGNSIHDTIPYQLP---PNLTSLNLASNNFSG----------------------NLPYSIASMVSLSYLNVSRNSLTQ 167 (618)
Q Consensus 113 ~L~~N~l~~~~p~~~~---~~L~~L~L~~N~l~~----------------------~~p~~~~~l~~L~~L~L~~N~l~~ 167 (618)
+|++|+++|.+|..+. ++|++|+|++|++++ .+|..++++++|++|+|++|.+++
T Consensus 99 ~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~ 178 (968)
T PLN00113 99 NLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVG 178 (968)
T ss_pred ECCCCccCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccc
Confidence 8888888877775432 555555555555554 444455555555555555555555
Q ss_pred chhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccc-cCC-CCccEEEcccccccccCchhhh-
Q 007107 168 SIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFSGWIPRELI- 244 (618)
Q Consensus 168 ~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~l~~N~l~g~ip~~~~- 244 (618)
.+|..++++++|++|+|++|++.+.+|..+.++++|++|+|++|++++.++. +.. .+|+.|+|++|+++|.+|..+.
T Consensus 179 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~ 258 (968)
T PLN00113 179 KIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGN 258 (968)
T ss_pred cCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhC
Confidence 5555555555555555555555555555555555555555555555554432 111 2466666666666666665443
Q ss_pred --cccchhccCCcCC
Q 007107 245 --SIRTFIYDGNSFD 257 (618)
Q Consensus 245 --~l~~l~~~~N~~~ 257 (618)
+|+.|.+.+|.+.
T Consensus 259 l~~L~~L~L~~n~l~ 273 (968)
T PLN00113 259 LKNLQYLFLYQNKLS 273 (968)
T ss_pred CCCCCEEECcCCeee
Confidence 3344555555543
No 398
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.94 E-value=4.4e-28 Score=255.66 Aligned_cols=198 Identities=26% Similarity=0.367 Sum_probs=161.2
Q ss_pred CCcccceeccCccc-eEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEEEEE
Q 007107 411 SFSQEFLIGEGSLG-RVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g-~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 488 (618)
-|...+++|.|+.| .||+|... |+.||||++-.. ..+...+|++.++.- .|||||++++.-.+....|++.|
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e-----~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEE-----FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred eeccHHHcccCCCCcEEEEEeeC-CceehHHHHhhH-----hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 45667789999998 47999885 889999998532 344567899988876 69999999999899999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC---C--CCcEEeeccccc
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---E--LNPHLSDCGLAA 563 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~---~--~~~kl~Dfgl~~ 563 (618)
.|.. +|.+++...............+.+..|++.||++||+. +||||||||.||||+. + ..++|+|||+++
T Consensus 584 LC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsK 659 (903)
T KOG1027|consen 584 LCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSK 659 (903)
T ss_pred Hhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEeccccccc
Confidence 9965 99999975311111111134577889999999999998 9999999999999975 3 468999999999
Q ss_pred cCCCCCcccc--ccccccccccCccccccCCccccchhhhHHHHHHHHHhC-CCCCCC
Q 007107 564 LTPNTERQVS--TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTG-RKPLDR 618 (618)
Q Consensus 564 ~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg-~~Pf~~ 618 (618)
..+....... ....||-+|+|||++....-+.++||||+||++|+.++| ..||.+
T Consensus 660 kl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd 717 (903)
T KOG1027|consen 660 KLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGD 717 (903)
T ss_pred ccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCc
Confidence 8876544333 356899999999999998888899999999999999995 999964
No 399
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=4.1e-27 Score=217.99 Aligned_cols=196 Identities=22% Similarity=0.375 Sum_probs=158.5
Q ss_pred hhcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceE-EeeCCeEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGY-CAEHGQRL 484 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~-~~~~~~~~ 484 (618)
..+.|.+.+.||+|.||.+-+++++. ...+++|-+..... ..++|.+|..---.+ .|.||+.-|++ |...+.++
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t---t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT---TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh---hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 35678999999999999999998875 67788898875543 357788887654444 58999987775 56677889
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeec--CCCCcEEeecccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD--DELNPHLSDCGLA 562 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~--~~~~~kl~Dfgl~ 562 (618)
+++||++.|+|.+-+. ...+-+....+++.|+++|++|||+. ++||||||.+||||- +...+|++|||.+
T Consensus 99 F~qE~aP~gdL~snv~-----~~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t 170 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVE-----AAGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLT 170 (378)
T ss_pred EeeccCccchhhhhcC-----cccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccc
Confidence 9999999999998773 45677888899999999999999999 999999999999994 4458999999999
Q ss_pred ccCCCCCccccccccccccccCccccccC-----CccccchhhhHHHHHHHHHhCCCCCCC
Q 007107 563 ALTPNTERQVSTQMVGAFGYSAPEFALSG-----IYTVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
+..+..... ..-+..|.+||..... ...+.+|||.||+++|.++||+.||++
T Consensus 171 ~k~g~tV~~----~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQk 227 (378)
T KOG1345|consen 171 RKVGTTVKY----LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQK 227 (378)
T ss_pred cccCceehh----hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchh
Confidence 765433222 2345679999987532 246789999999999999999999973
No 400
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.93 E-value=4.6e-27 Score=241.77 Aligned_cols=199 Identities=29% Similarity=0.455 Sum_probs=172.0
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
....+|+..+.+|.|.||.||||+.. .++..|+|.++..... ..+-+..|+-+++..+||||+.++|.+-..+..++
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~d--d~~~iqqei~~~~dc~h~nivay~gsylr~dklwi 89 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD--DFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWI 89 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCc--cccccccceeeeecCCCcChHHHHhhhhhhcCcEE
Confidence 45678999999999999999999765 5888999999865432 34556788888999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
+|||+.+|+|.+..+ ..+.+++.++....+..++|++|||++ +-+|||||-.||++++.|.+|++|||.+..+
T Consensus 90 cMEycgggslQdiy~----~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqi 162 (829)
T KOG0576|consen 90 CMEYCGGGSLQDIYH----VTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQI 162 (829)
T ss_pred EEEecCCCcccceee----ecccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhh
Confidence 999999999999887 567899999999999999999999999 8899999999999999999999999998655
Q ss_pred CCCCccccccccccccccCccccc---cCCccccchhhhHHHHHHHHHhCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKP 615 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~P 615 (618)
... -..+..+.||++|||||+.. .+.|..++|||++|+...|+-.=+.|
T Consensus 163 tat-i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpp 214 (829)
T KOG0576|consen 163 TAT-IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPP 214 (829)
T ss_pred hhh-hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCc
Confidence 322 22345679999999999873 56689999999999999998776666
No 401
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.6e-24 Score=216.06 Aligned_cols=131 Identities=22% Similarity=0.435 Sum_probs=109.3
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-----C---CcccccceEEeeC
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-----H---PNIVTLAGYCAEH 480 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~l~~~~~~~ 480 (618)
.+|...++||-|.|++||++.+. +.+.||+|+.+.+. ...+.-+.||+++++++ | ..||++++.|...
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq---hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs 154 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ---HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS 154 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh---HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence 78999999999999999999765 56789999987543 23445678899988873 3 3599999999764
Q ss_pred C----eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeee
Q 007107 481 G----QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL 548 (618)
Q Consensus 481 ~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl 548 (618)
+ +.++|+|++. .+|..++... ..+.++...+.+|++||+.||.|||+.+ +|||-||||+|||+
T Consensus 155 GpNG~HVCMVfEvLG-dnLLklI~~s--~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 155 GPNGQHVCMVFEVLG-DNLLKLIKYS--NYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CCCCcEEEEEehhhh-hHHHHHHHHh--CCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 3 7899999995 4888888754 4567889999999999999999999998 99999999999998
No 402
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.92 E-value=5.7e-24 Score=203.58 Aligned_cols=184 Identities=36% Similarity=0.598 Sum_probs=158.9
Q ss_pred eccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCCChh
Q 007107 418 IGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLH 496 (618)
Q Consensus 418 Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 496 (618)
||+|.+|.||++...+ ++.+++|++....... ..+.+.+|++.++.++|++|+++++++......++++||+++++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence 6899999999998865 8999999997654322 3577899999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC-CCCcEEeeccccccCCCCCcccccc
Q 007107 497 DMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-ELNPHLSDCGLAALTPNTERQVSTQ 575 (618)
Q Consensus 497 ~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~-~~~~kl~Dfgl~~~~~~~~~~~~~~ 575 (618)
+++.... ..+++..+..++.++++++++||+. +++|+||+|.||+++. ++.++|+|||.+........ ....
T Consensus 80 ~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~ 152 (215)
T cd00180 80 DLLKENE---GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKT 152 (215)
T ss_pred HHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhc
Confidence 9986321 4688999999999999999999999 9999999999999999 89999999999976654321 1223
Q ss_pred ccccccccCccccccC-CccccchhhhHHHHHHHH
Q 007107 576 MVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLEL 609 (618)
Q Consensus 576 ~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~el 609 (618)
..+...|++||.+... .++.+.|+|++|+++++|
T Consensus 153 ~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l 187 (215)
T cd00180 153 IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187 (215)
T ss_pred ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence 4577889999999887 788999999999999987
No 403
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.92 E-value=1.2e-25 Score=224.95 Aligned_cols=207 Identities=25% Similarity=0.305 Sum_probs=170.7
Q ss_pred eeehhhhhhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC------CCccc
Q 007107 399 SYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR------HPNIV 471 (618)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv 471 (618)
.|.+...+..-.+|......|+|-|+.|.+|... .|..||||++.....- .+.=+.|+++|.+++ --|++
T Consensus 421 YYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M---~KtGl~EleiLkKL~~AD~Edk~Hcl 497 (752)
T KOG0670|consen 421 YYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM---HKTGLKELEILKKLNDADPEDKFHCL 497 (752)
T ss_pred eEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH---hhhhhHHHHHHHHhhccCchhhhHHH
Confidence 3555556667788988889999999999999765 4889999999865422 233467888888885 34799
Q ss_pred ccceEEeeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC
Q 007107 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (618)
Q Consensus 472 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~ 551 (618)
+++..|....++|||+|.+. .+|.++++.+.. .-.+....+..++.|+.-||..|... +|+|.||||+||||++.
T Consensus 498 rl~r~F~hknHLClVFE~Ls-lNLRevLKKyG~-nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~ 572 (752)
T KOG0670|consen 498 RLFRHFKHKNHLCLVFEPLS-LNLREVLKKYGR-NVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNES 572 (752)
T ss_pred HHHHHhhhcceeEEEehhhh-chHHHHHHHhCc-ccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccC
Confidence 99999999999999999885 489999976543 34578889999999999999999998 99999999999999865
Q ss_pred -CCcEEeeccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCC
Q 007107 552 -LNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 552 -~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf 616 (618)
..+||||||.|......+ . +.+.-+.-|.|||++.+-.|+...|+||+||.||||+||+.-|
T Consensus 573 k~iLKLCDfGSA~~~~ene--i-tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlF 635 (752)
T KOG0670|consen 573 KNILKLCDFGSASFASENE--I-TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILF 635 (752)
T ss_pred cceeeeccCcccccccccc--c-cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceec
Confidence 568999999997654322 1 2345566799999999999999999999999999999999877
No 404
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.91 E-value=4.5e-25 Score=217.29 Aligned_cols=198 Identities=27% Similarity=0.401 Sum_probs=164.0
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEc----CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEee
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAE 479 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 479 (618)
+....+.|...++||+|.|++||++.+. ..+.||+|.+.... ...++..|++++..+ .+.||+++.+.+..
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts----~p~ri~~El~~L~~~gG~~ni~~~~~~~rn 106 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS----SPSRILNELEMLYRLGGSDNIIKLNGCFRN 106 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc----CchHHHHHHHHHHHhccchhhhcchhhhcc
Confidence 3445667889999999999999999654 36789999986432 356688999999988 59999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeec-CCCCcEEee
Q 007107 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD-DELNPHLSD 558 (618)
Q Consensus 480 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~-~~~~~kl~D 558 (618)
++...+|+||++.....+++. .++...+..++..+..||+++|++ |||||||||.|+|.+ ..+.-.|+|
T Consensus 107 nd~v~ivlp~~~H~~f~~l~~-------~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvD 176 (418)
T KOG1167|consen 107 NDQVAIVLPYFEHDRFRDLYR-------SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVD 176 (418)
T ss_pred CCeeEEEecccCccCHHHHHh-------cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEe
Confidence 999999999999988888875 356788899999999999999999 999999999999998 456788999
Q ss_pred ccccccCC-----------------C----------------CCcc----------ccccccccccccCccccccC-Ccc
Q 007107 559 CGLAALTP-----------------N----------------TERQ----------VSTQMVGAFGYSAPEFALSG-IYT 594 (618)
Q Consensus 559 fgl~~~~~-----------------~----------------~~~~----------~~~~~~gt~~y~aPE~~~~~-~~~ 594 (618)
||++.... . .... ......||++|+|||++... ..+
T Consensus 177 FgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qt 256 (418)
T KOG1167|consen 177 FGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQT 256 (418)
T ss_pred chhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcC
Confidence 99986110 0 0000 01124799999999999764 468
Q ss_pred ccchhhhHHHHHHHHHhCCCCC
Q 007107 595 VKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 595 ~~~DvwSlG~il~elltg~~Pf 616 (618)
+++||||.|||+.-+++++.||
T Consensus 257 taiDiws~GVI~Lslls~~~PF 278 (418)
T KOG1167|consen 257 TAIDIWSAGVILLSLLSRRYPF 278 (418)
T ss_pred Cccceeeccceeehhhcccccc
Confidence 9999999999999999999998
No 405
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.91 E-value=6e-24 Score=216.92 Aligned_cols=169 Identities=17% Similarity=0.154 Sum_probs=130.4
Q ss_pred hhhcCCcccceeccCccceEEEEEEc--CCcEEEEEEcCcccc---cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA--NGKIMAVKKIDNAAL---SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~--~g~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (618)
....+|...+.||+|+||.||+|.+. +++.+|||++..... .......+.+|++++++++|+|+++.+.. .+
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~ 91 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TG 91 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cC
Confidence 34567999999999999999999765 577889998753311 23345678999999999999999863322 25
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCC-CCCCeeecCCCCcEEeecc
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNF-KSANILLDDELNPHLSDCG 560 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dl-kp~NiLl~~~~~~kl~Dfg 560 (618)
..++||||+++++|... . ... ...++.|+++||+|||+. +|+|||| ||+|||++.++.+||+|||
T Consensus 92 ~~~LVmE~~~G~~L~~~-~----~~~------~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 92 KDGLVRGWTEGVPLHLA-R----PHG------DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred CcEEEEEccCCCCHHHh-C----ccc------hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECc
Confidence 68999999999999632 1 111 145788999999999999 9999999 9999999999999999999
Q ss_pred ccccCCCCCccc-------cccccccccccCccccccCC
Q 007107 561 LAALTPNTERQV-------STQMVGAFGYSAPEFALSGI 592 (618)
Q Consensus 561 l~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~ 592 (618)
+++......... -+...+++.|+|||.+...+
T Consensus 158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~ 196 (365)
T PRK09188 158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRE 196 (365)
T ss_pred cceecccCcchhhhhhhhhhhhhhccCccCCcccCChhh
Confidence 998664332111 13467889999999986443
No 406
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=1.1e-22 Score=185.66 Aligned_cols=199 Identities=23% Similarity=0.323 Sum_probs=164.3
Q ss_pred hcCCcccceeccCccceEEEEE-EcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCC-CcccccceEEeeCCeEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH-PNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv 486 (618)
...|...+.||.|+||.+|.|. ..+|++||||.-...... .++..|.++.+.+++ ..|..+..+..+.....+|
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h----pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlV 89 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH----PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLV 89 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC----cchhHHHHHHHHhccCCCCchhhhhccccccceee
Confidence 4678899999999999999995 457999999987654432 346677777777764 5677777777888889999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC---CCCcEEeeccccc
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---ELNPHLSDCGLAA 563 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~---~~~~kl~Dfgl~~ 563 (618)
||.+. -+|+++..++. ..++..+++-.+-|++.-++|+|.+ ++|||||||+|+|+.- ...+.++|||+|+
T Consensus 90 MdLLG-PsLEdLfnfC~---R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK 162 (341)
T KOG1163|consen 90 MDLLG-PSLEDLFNFCS---RRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK 162 (341)
T ss_pred eeccC-ccHHHHHHHHh---hhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchh
Confidence 99984 59999998763 5688899999999999999999999 9999999999999973 3468899999998
Q ss_pred cCCCCCcc------ccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCCC
Q 007107 564 LTPNTERQ------VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 564 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
.+.+.... ......||.+|.+-....+...+.+.|+-|+|.++.+...|..||+.
T Consensus 163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQg 223 (341)
T KOG1163|consen 163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQG 223 (341)
T ss_pred hhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccc
Confidence 66433221 12345899999999999888899999999999999999999999973
No 407
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=3.8e-22 Score=204.49 Aligned_cols=199 Identities=22% Similarity=0.263 Sum_probs=159.1
Q ss_pred CCcccceeccCccceEEEEEEcCC--cEEEEEEcCcccccHHHHHHHHHHHHHhhcCCC----CcccccceEE-eeCCeE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFANG--KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH----PNIVTLAGYC-AEHGQR 483 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~~g--~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~-~~~~~~ 483 (618)
+|...+.||+|+||.||++..... +.+|+|.-....... . ..+..|..++..+.. +++..+++.. ......
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~-~-~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK-P-SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC-C-ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence 788999999999999999987653 477877765432111 1 145666666666652 5788888888 477788
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC-----CCcEEee
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE-----LNPHLSD 558 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~-----~~~kl~D 558 (618)
++||+.+ |.+|.++..... .+.++..+..+++.|++.+|++||+. |++||||||.|+++... ..+.|.|
T Consensus 97 ~iVM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llD 170 (322)
T KOG1164|consen 97 FIVMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLD 170 (322)
T ss_pred EEEEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEe
Confidence 9999987 569999775332 57899999999999999999999999 99999999999999854 3589999
Q ss_pred ccccc--cCCCCCc----cc---cccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 559 CGLAA--LTPNTER----QV---STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 559 fgl~~--~~~~~~~----~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
||+++ .+..... .. .....||.+|++++...+...+++.|+||++.++.|++.|..||.
T Consensus 171 fGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~ 238 (322)
T KOG1164|consen 171 FGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWE 238 (322)
T ss_pred cCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCc
Confidence 99998 3322211 11 123569999999999999999999999999999999999999985
No 408
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.88 E-value=4.5e-23 Score=236.50 Aligned_cols=146 Identities=16% Similarity=0.193 Sum_probs=113.7
Q ss_pred CCC-CcccccceEE-------eeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 007107 465 LRH-PNIVTLAGYC-------AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV 536 (618)
Q Consensus 465 l~h-~niv~l~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 536 (618)
++| +||.++++++ ...+..+.++||+ +++|.++++. ....+++.++..++.||++||+|||++ +|
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---gI 101 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN---PDRSVDAFECFHVFRQIVEIVNAAHSQ---GI 101 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc---ccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 345 5788888877 2234667888987 5599999962 245689999999999999999999999 99
Q ss_pred eecCCCCCCeeecC-------------------CCCcEEeeccccccCCCCCc---------------cccccccccccc
Q 007107 537 VHRNFKSANILLDD-------------------ELNPHLSDCGLAALTPNTER---------------QVSTQMVGAFGY 582 (618)
Q Consensus 537 iH~Dlkp~NiLl~~-------------------~~~~kl~Dfgl~~~~~~~~~---------------~~~~~~~gt~~y 582 (618)
+||||||+|||++. ++.+|++|||+++....... .......||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999954 44566667776653211000 001123688999
Q ss_pred cCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 583 SAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 583 ~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
||||++.+..|+.++|||||||++|||++|..|+.
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~ 216 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSRE 216 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchh
Confidence 99999999999999999999999999999999875
No 409
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.87 E-value=4e-21 Score=197.33 Aligned_cols=200 Identities=36% Similarity=0.568 Sum_probs=170.5
Q ss_pred CcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHH-HHHHHHHHHHHhhcCCCC-cccccceEEeeCCeEEEEEEe
Q 007107 412 FSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQ-EEDNFLEAVSNMSRLRHP-NIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~ 489 (618)
|...+.||.|+||.||++... ..+++|.+........ ....+.+|+..++.+.|+ +++++.+.+......++++|+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566778999999999999886 8889999887655443 577889999999999988 799999999777788999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCC-CcEEeeccccccCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL-NPHLSDCGLAALTPNT 568 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~-~~kl~Dfgl~~~~~~~ 568 (618)
+.++++.+++...... ..+.......+..|++.+++|+|+. +++|||+||+||+++..+ .++++|||.++.....
T Consensus 80 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 80 VDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred CCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 9999999777522111 3788999999999999999999999 999999999999999888 7999999999755443
Q ss_pred Ccc-----ccccccccccccCcccccc---CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQ-----VSTQMVGAFGYSAPEFALS---GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~-----~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... ......|+..|+|||.+.+ ..+....|+||+|++++++++|..||.
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~ 212 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFE 212 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 322 2345689999999999988 578899999999999999999999975
No 410
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.86 E-value=2.2e-22 Score=186.62 Aligned_cols=194 Identities=21% Similarity=0.371 Sum_probs=157.8
Q ss_pred CcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecC
Q 007107 412 FSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVG 491 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 491 (618)
....-+|.+...|+.|+|+++. ..+++|++...........+|.+|.-.++.+.||||+++++.|..+....++..||+
T Consensus 192 lnl~tkl~e~hsgelwrgrwqg-ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp 270 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQG-NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMP 270 (448)
T ss_pred hhhhhhhccCCCcccccccccC-cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeecc
Confidence 3444568899999999999974 445568887666666667889999999999999999999999999999999999999
Q ss_pred CCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCce-ecCCCCCCeeecCCCCcEEe--eccccccCCCC
Q 007107 492 NGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVV-HRNFKSANILLDDELNPHLS--DCGLAALTPNT 568 (618)
Q Consensus 492 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ii-H~Dlkp~NiLl~~~~~~kl~--Dfgl~~~~~~~ 568 (618)
.|+|+.+++.. ..-..+..++.+++.+|++|++|||+.. +++ ---|.+..|+||++.+++|+ |-.++...
T Consensus 271 ~gslynvlhe~--t~vvvd~sqav~faldiargmaflhsle--p~ipr~~lns~hvmidedltarismad~kfsfqe--- 343 (448)
T KOG0195|consen 271 FGSLYNVLHEQ--TSVVVDHSQAVRFALDIARGMAFLHSLE--PMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE--- 343 (448)
T ss_pred chHHHHHHhcC--ccEEEecchHHHHHHHHHhhHHHHhhcc--hhhhhhhcccceEEecchhhhheecccceeeeec---
Confidence 99999999843 3445788899999999999999999984 444 44799999999999998875 33322111
Q ss_pred CccccccccccccccCccccccCCc---cccchhhhHHHHHHHHHhCCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALSGIY---TVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
.+..-.|.||+||.+...+. -+++|+|||++++|||.|++.||.+
T Consensus 344 -----~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfad 391 (448)
T KOG0195|consen 344 -----VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFAD 391 (448)
T ss_pred -----cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhcccccccc
Confidence 11234578999999987654 3579999999999999999999974
No 411
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.86 E-value=1.5e-21 Score=183.49 Aligned_cols=142 Identities=19% Similarity=0.229 Sum_probs=109.5
Q ss_pred cceeccCccceEEEEEEcCCcEEEEEEcCcccccHHH------------------------HHHHHHHHHHhhcCCCCcc
Q 007107 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQE------------------------EDNFLEAVSNMSRLRHPNI 470 (618)
Q Consensus 415 ~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~------------------------~~~~~~e~~~l~~l~h~ni 470 (618)
...||+|++|.||+|...+|+.||+|+++........ ......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3579999999999999888999999999754321111 1122358899999988877
Q ss_pred cccceEEeeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHH-hhcCCCCceecCCCCCCeeec
Q 007107 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYL-HEVCLPSVVHRNFKSANILLD 549 (618)
Q Consensus 471 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~iiH~Dlkp~NiLl~ 549 (618)
.....+.. ...++||||++++++..... ....++...+..++.|++.+|+|+ |+. +|+||||||+|||++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~----~~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~ 152 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRL----KDAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH 152 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhh----hcCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE
Confidence 54433322 23489999999877754432 235688999999999999999999 688 999999999999998
Q ss_pred CCCCcEEeeccccccCC
Q 007107 550 DELNPHLSDCGLAALTP 566 (618)
Q Consensus 550 ~~~~~kl~Dfgl~~~~~ 566 (618)
++.++|+|||++....
T Consensus 153 -~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 153 -DGKLYIIDVSQSVEHD 168 (190)
T ss_pred -CCcEEEEEccccccCC
Confidence 4789999999996543
No 412
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.85 E-value=2.2e-21 Score=184.08 Aligned_cols=175 Identities=13% Similarity=0.163 Sum_probs=135.5
Q ss_pred hhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHH-H------HHHHHHHHhhcCCCCcccccceEEe
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEE-D------NFLEAVSNMSRLRHPNIVTLAGYCA 478 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~-~------~~~~e~~~l~~l~h~niv~l~~~~~ 478 (618)
....++|...+++|.|+||.||++.. ++..+|+|.+.......+.. . .+.+|+..+.++.|++|..+.+++.
T Consensus 27 ~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~ 105 (232)
T PRK10359 27 DFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYL 105 (232)
T ss_pred HHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeee
Confidence 44568899999999999999999866 57789999997654333221 2 2578999999999999999988865
Q ss_pred eC--------CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC
Q 007107 479 EH--------GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD 550 (618)
Q Consensus 479 ~~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~ 550 (618)
.. +..++||||++|.+|.++.. +++ ....+++.++..+|+. |++|||++|+||++++
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~ 170 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSK 170 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeC
Confidence 43 35789999999999987642 222 2455899999999999 9999999999999999
Q ss_pred CCCcEEeeccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHH
Q 007107 551 ELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELL 610 (618)
Q Consensus 551 ~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ell 610 (618)
++ ++|+|||........... ..++....|..++|+||||+.+....
T Consensus 171 ~g-i~liDfg~~~~~~e~~a~-------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 171 NG-LRIIDLSGKRCTAQRKAK-------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CC-EEEEECCCcccccchhhH-------------HHHHHHhHhcccccccceeEeehHHH
Confidence 88 999999988655321111 11344556778999999999877543
No 413
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=2.4e-21 Score=184.80 Aligned_cols=197 Identities=20% Similarity=0.324 Sum_probs=164.2
Q ss_pred cCCcccceeccCccceEEEEE-EcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAE-FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 487 (618)
-.|...++||+|.||+++.|. +-+++.||||.=.... +..+++.|....+.+ ..++|..++-|.....+..||+
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS----~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC----CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 468888999999999999995 4579999999653222 345567777776666 5789998888777788889999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC-----CCcEEeecccc
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE-----LNPHLSDCGLA 562 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~-----~~~kl~Dfgl~ 562 (618)
|.+. -+|+|+...+ +..++.+++..+|.|++.-++|+|++ .+|.|||||+|+||... ..+.|+|||+|
T Consensus 104 dLLG-PSLEDLFD~C---gR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmA 176 (449)
T KOG1165|consen 104 DLLG-PSLEDLFDLC---GRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMA 176 (449)
T ss_pred hhhC-cCHHHHHHHh---cCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccch
Confidence 9984 5999988754 46799999999999999999999999 89999999999999743 35789999999
Q ss_pred ccCCCCCccc------cccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 563 ALTPNTERQV------STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+.+.+..... .....||.+||+-....+.+.+++.|+-|||-++.+.+.|..||+
T Consensus 177 K~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQ 237 (449)
T KOG1165|consen 177 KEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQ 237 (449)
T ss_pred hhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccc
Confidence 8776543221 234579999999999999999999999999999999999999996
No 414
>PLN03150 hypothetical protein; Provisional
Probab=99.85 E-value=1e-20 Score=209.10 Aligned_cols=136 Identities=38% Similarity=0.607 Sum_probs=87.4
Q ss_pred cCCChHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCC---CCCceeEeeCC------CEEEEEcCCCCCcccccccccCCC
Q 007107 37 CTTDSSDVQALQVLYTSLNSPSVLTNWKGNEGDPCG---ESWKGVACEGS------AVVSIDISGLGLSGTMGYLLSDLL 107 (618)
Q Consensus 37 ~~~~~~~~~al~~~~~~~~~~~~~~~w~~~~~~~c~---~~w~gv~c~~~------~v~~l~l~~~~l~~~~~~~l~~l~ 107 (618)
..+.+.|.+||+++|++++++.. .+|.+ ++|+ +.|.||.|... .|+.|+|++|+|.|.+|..++.|+
T Consensus 367 ~~t~~~~~~aL~~~k~~~~~~~~-~~W~g---~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~ 442 (623)
T PLN03150 367 SKTLLEEVSALQTLKSSLGLPLR-FGWNG---DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLR 442 (623)
T ss_pred cccCchHHHHHHHHHHhcCCccc-CCCCC---CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCC
Confidence 45677899999999999976542 48964 4553 47999999631 256666666666666666665555
Q ss_pred CCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccC
Q 007107 108 SLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFN 187 (618)
Q Consensus 108 ~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 187 (618)
+|+.|+|++|+|+ |.+|..++.+++|+.|+|++|+|+|.+|+.++++++|+.|+|++|
T Consensus 443 ~L~~L~Ls~N~l~----------------------g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N 500 (623)
T PLN03150 443 HLQSINLSGNSIR----------------------GNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGN 500 (623)
T ss_pred CCCEEECCCCccc----------------------CcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCC
Confidence 5555555544444 344455556666666666666666666666666666666666666
Q ss_pred cCCCCCCCCcc
Q 007107 188 NFSGDLPNSFI 198 (618)
Q Consensus 188 ~l~g~~p~~~~ 198 (618)
+|+|.+|..+.
T Consensus 501 ~l~g~iP~~l~ 511 (623)
T PLN03150 501 SLSGRVPAALG 511 (623)
T ss_pred cccccCChHHh
Confidence 66666665543
No 415
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.84 E-value=2.6e-20 Score=175.68 Aligned_cols=142 Identities=20% Similarity=0.234 Sum_probs=111.4
Q ss_pred cceeccCccceEEEEEEcCCcEEEEEEcCcccccH------------------------HHHHHHHHHHHHhhcCCCCcc
Q 007107 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSL------------------------QEEDNFLEAVSNMSRLRHPNI 470 (618)
Q Consensus 415 ~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~------------------------~~~~~~~~e~~~l~~l~h~ni 470 (618)
...||+|++|.||+|...+|+.||||++....... .....+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 35799999999999988789999999987542110 002234578899999999987
Q ss_pred cccceEEeeCCeEEEEEEecCCCChhhh-hhcccCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCceecCCCCCCeee
Q 007107 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDM-LHFADDSSKNLTWNARVRVALGTARALEYLHE-VCLPSVVHRNFKSANILL 548 (618)
Q Consensus 471 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~Dlkp~NiLl 548 (618)
.....+... ..++||||++++++... +. ...++..+...++.|++.++.++|+ . ||+||||||+||++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll 151 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLK-----DVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILY 151 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhh-----hccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEE
Confidence 555444333 34899999998755432 32 3457788899999999999999999 8 99999999999999
Q ss_pred cCCCCcEEeeccccccCCC
Q 007107 549 DDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 549 ~~~~~~kl~Dfgl~~~~~~ 567 (618)
+ ++.++|+|||++...+.
T Consensus 152 ~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 152 H-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred E-CCCEEEEEcccceecCC
Confidence 9 78999999999976653
No 416
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.83 E-value=6e-20 Score=170.35 Aligned_cols=184 Identities=15% Similarity=0.114 Sum_probs=137.3
Q ss_pred ccceeccCccceEEEEEEcCCcEEEEEEcCccccc--HHHHHHHHHHHHHhhcCC-CCcccccceEEeeCCeEEEEEEec
Q 007107 414 QEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALS--LQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLLVYEYV 490 (618)
Q Consensus 414 ~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 490 (618)
....|++|+||+||.+.. .+.+++.+.+.....- .-....+.+|+++++++. |+++++++++ +..+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 345799999999998766 5788887877654431 112336789999999995 5788888886 4579999999
Q ss_pred CCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCC-CCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNF-KSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dl-kp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
.+.+|.+... .. ...++.|++++|+++|+. ||+|||| ||+|||+++++.++|+|||++.......
T Consensus 81 ~G~~L~~~~~-----~~------~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 81 AGAAMYQRPP-----RG------DLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred cCccHHhhhh-----hh------hHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 9988865432 11 134678999999999999 9999999 7999999999999999999997554322
Q ss_pred cc----c--------cccccccccccCccccccC-Ccc-ccchhhhHHHHHHHHHhCCCCC
Q 007107 570 RQ----V--------STQMVGAFGYSAPEFALSG-IYT-VKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 570 ~~----~--------~~~~~gt~~y~aPE~~~~~-~~~-~~~DvwSlG~il~elltg~~Pf 616 (618)
.. . ......++.|++|+...-- ..+ ...++++-|.-+|.++||..|+
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~ 207 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLH 207 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCc
Confidence 10 0 0112356777777754321 222 5679999999999999999875
No 417
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.83 E-value=1.5e-20 Score=175.49 Aligned_cols=105 Identities=31% Similarity=0.345 Sum_probs=93.0
Q ss_pred CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccc
Q 007107 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (618)
Q Consensus 493 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~ 572 (618)
|+|.++++. ....+++.+++.++.|++.||+|||+. + ||+|||++.++.+|+ ||++.......
T Consensus 1 GsL~~~l~~---~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~--- 63 (176)
T smart00750 1 VSLADILEV---RGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ--- 63 (176)
T ss_pred CcHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc---
Confidence 688998863 245699999999999999999999998 5 999999999999999 99987654322
Q ss_pred cccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..||+.|||||++.+..++.++|||||||++|||+||+.||.
T Consensus 64 ---~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~ 105 (176)
T smart00750 64 ---SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYN 105 (176)
T ss_pred ---CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCcc
Confidence 258899999999999999999999999999999999999985
No 418
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.82 E-value=4.3e-21 Score=208.89 Aligned_cols=197 Identities=25% Similarity=0.308 Sum_probs=158.3
Q ss_pred cccceeccCccceEEEEEEc-CCcEEEEEEcC----cccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 413 SQEFLIGEGSLGRVYRAEFA-NGKIMAVKKID----NAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 413 ~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~----~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
....++|.|++|.|+.+... ..+.++.|.+. ......+....+..|+.+-..+.|+|++..+..+.+.....-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 45568999999988777433 34444444433 22212222233677888888999999998888887777666669
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++ +|..++. ....+...++..++.|+..|++|+|+. ||.|||+|++|++++.+|.+||+|||.+....-
T Consensus 401 E~~~~-Dlf~~~~----~~~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~ 472 (601)
T KOG0590|consen 401 EYCPY-DLFSLVM----SNGKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRY 472 (601)
T ss_pred hcccH-HHHHHHh----cccccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeecc
Confidence 99999 9999885 234788889999999999999999999 999999999999999999999999999976643
Q ss_pred CCc---cccccccccccccCccccccCCccc-cchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TER---QVSTQMVGAFGYSAPEFALSGIYTV-KSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~-~~DvwSlG~il~elltg~~Pf~ 617 (618)
... ......+|+-.|+|||++.+..|.+ ..||||.|+++..|.+|+.||.
T Consensus 473 ~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk 526 (601)
T KOG0590|consen 473 PWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWK 526 (601)
T ss_pred CcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccc
Confidence 332 4556779999999999999999975 5999999999999999999985
No 419
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.81 E-value=3.5e-21 Score=199.40 Aligned_cols=187 Identities=26% Similarity=0.394 Sum_probs=155.9
Q ss_pred eeccCccceEEEEE----EcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-CCcccccceEEeeCCeEEEEEEecC
Q 007107 417 LIGEGSLGRVYRAE----FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLLVYEYVG 491 (618)
Q Consensus 417 ~Lg~G~~g~Vy~~~----~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 491 (618)
.+|+|.||.|++++ ...|..+|.|..++.............|..++...+ ||.++++.-.+..+...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37999999999763 234778899988766543333334555666777776 9999999999999999999999999
Q ss_pred CCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCcc
Q 007107 492 NGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ 571 (618)
Q Consensus 492 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~ 571 (618)
+|++...+. ....+++.....+...++-+++++|+. +|+|||+|++||+++.+|++++.|||+++..-....
T Consensus 81 gg~lft~l~----~~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~- 152 (612)
T KOG0603|consen 81 GGDLFTRLS----KEVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI- 152 (612)
T ss_pred cchhhhccc----cCCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhh-
Confidence 999988775 445677777888888999999999999 999999999999999999999999999976543322
Q ss_pred ccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 572 VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 572 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.+||..|||||++. .....+|.||||++++||+||..||.
T Consensus 153 ----~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~ 192 (612)
T KOG0603|consen 153 ----ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFG 192 (612)
T ss_pred ----cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCc
Confidence 28999999999998 55678999999999999999999995
No 420
>PRK10345 hypothetical protein; Provisional
Probab=99.78 E-value=1.6e-18 Score=164.33 Aligned_cols=139 Identities=16% Similarity=0.215 Sum_probs=105.6
Q ss_pred CcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-----CCCcccccceEEeeCC---eE
Q 007107 412 FSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-----RHPNIVTLAGYCAEHG---QR 483 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~~~~~~~~---~~ 483 (618)
+...+.||+|+||.||. +++....+||++..... ...+.+.+|++.++.+ .||||++++|+++++. ..
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~--~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v 79 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGD--GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV 79 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCeEEEEEecccc--chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence 34567899999999996 44333347888865432 2456789999999999 5799999999998873 43
Q ss_pred E-EEEEe--cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHH-HHHhhcCCCCceecCCCCCCeeecC----CCCcE
Q 007107 484 L-LVYEY--VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARAL-EYLHEVCLPSVVHRNFKSANILLDD----ELNPH 555 (618)
Q Consensus 484 ~-lv~e~--~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L-~~LH~~~~~~iiH~Dlkp~NiLl~~----~~~~k 555 (618)
+ +|+|| +.+++|.+++.. ..+++. ..++.|++.++ +|||++ +|+||||||+|||++. +..++
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~-----~~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~ 149 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQ-----CRYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPV 149 (210)
T ss_pred EEEEecCCCCcchhHHHHHHc-----ccccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEE
Confidence 3 78999 557999999962 235544 35577778777 999999 9999999999999974 33799
Q ss_pred Eee-cccccc
Q 007107 556 LSD-CGLAAL 564 (618)
Q Consensus 556 l~D-fgl~~~ 564 (618)
|+| ||....
T Consensus 150 LiDg~G~~~~ 159 (210)
T PRK10345 150 VCDNIGESTF 159 (210)
T ss_pred EEECCCCcce
Confidence 999 454433
No 421
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.77 E-value=5.2e-21 Score=165.98 Aligned_cols=173 Identities=25% Similarity=0.381 Sum_probs=152.9
Q ss_pred eCCCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEE
Q 007107 81 EGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYL 158 (618)
Q Consensus 81 ~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 158 (618)
+..+++.|.|++|.|+ .+|+.+..|.+|+.|++++|+|. .+|.++. ++|+.|+++-|++. .+|..|+.++.|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 3467999999999997 57889999999999999999999 7787777 89999999999999 899999999999999
Q ss_pred EeecCCCC-CchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCC-CCccEEEccccccc
Q 007107 159 NVSRNSLT-QSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSG-LPLTTLNVANNHFS 236 (618)
Q Consensus 159 ~L~~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~l~~N~l~ 236 (618)
||.+|++. ...|..|-.|+.|+.|+|++|.|. .+|..++++++|+.|.+..|.+-..+..... ..|++|++.+|+++
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll~lpkeig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLLSLPKEIGDLTRLRELHIQGNRLT 186 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchhhCcHHHHHHHHHHHHhcccceee
Confidence 99999998 467888989999999999999999 8999999999999999999998876544433 35999999999999
Q ss_pred ccCchhhhccc------chhccCCcCCC
Q 007107 237 GWIPRELISIR------TFIYDGNSFDN 258 (618)
Q Consensus 237 g~ip~~~~~l~------~l~~~~N~~~~ 258 (618)
.+|+++.++. .+.+..|||-.
T Consensus 187 -vlppel~~l~l~~~k~v~r~E~NPwv~ 213 (264)
T KOG0617|consen 187 -VLPPELANLDLVGNKQVMRMEENPWVN 213 (264)
T ss_pred -ecChhhhhhhhhhhHHHHhhhhCCCCC
Confidence 8998887764 45677788764
No 422
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.76 E-value=1.2e-18 Score=193.06 Aligned_cols=200 Identities=22% Similarity=0.244 Sum_probs=156.6
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccH-HHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSL-QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
.+.....|.+.+.||+|+||.||+|...+|+.||+|.=+....-. .-..+++..++ . .--+.|..+...+.-.+.-
T Consensus 693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk-~--~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 693 FEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLK-P--QMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred eeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhc-h--hhhcchHHHHHHHccCCcc
Confidence 344456788888999999999999998889999999876553210 01122222222 0 0123455565566667788
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC-------CCCcEE
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-------ELNPHL 556 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~-------~~~~kl 556 (618)
++|+||.+.|+|.+++. ..+.++|..++.++.|+++.+++||.. +|||+||||+|+|+.. ..-++|
T Consensus 770 ~lv~ey~~~Gtlld~~N----~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~l 842 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLIN----TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYL 842 (974)
T ss_pred eeeeeccccccHHHhhc----cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEE
Confidence 99999999999999997 667899999999999999999999999 9999999999999952 345899
Q ss_pred eeccccccCCCC-CccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCC
Q 007107 557 SDCGLAALTPNT-ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRK 614 (618)
Q Consensus 557 ~Dfgl~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~ 614 (618)
+|||.+..+.-- +.......++|-.+-.+|+..++.++.++|.|.++-+++-|+.|++
T Consensus 843 IDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 843 IDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred EecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 999998544221 2234456788999999999999999999999999999999999874
No 423
>smart00090 RIO RIO-like kinase.
Probab=99.75 E-value=9.2e-18 Score=163.17 Aligned_cols=145 Identities=18% Similarity=0.146 Sum_probs=111.1
Q ss_pred CCcccceeccCccceEEEEE--EcCCcEEEEEEcCccccc--------------------H--HHHHHHHHHHHHhhcCC
Q 007107 411 SFSQEFLIGEGSLGRVYRAE--FANGKIMAVKKIDNAALS--------------------L--QEEDNFLEAVSNMSRLR 466 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~--~~~g~~vavK~~~~~~~~--------------------~--~~~~~~~~e~~~l~~l~ 466 (618)
-|.+.+.||+|++|.||+|. ..+|+.||+|.+...... . .....+..|++.+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47788899999999999998 567999999998743210 0 01234568999998887
Q ss_pred CCc--ccccceEEeeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC-ceecCCCC
Q 007107 467 HPN--IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS-VVHRNFKS 543 (618)
Q Consensus 467 h~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-iiH~Dlkp 543 (618)
+.. +.+++++ ...++||||+++++|..... ........+...++.|++.++++||+. + |+||||||
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp 177 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL----KDVEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSE 177 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccc----ccCCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCCh
Confidence 533 3333332 24589999999988876542 223456667788999999999999999 8 99999999
Q ss_pred CCeeecCCCCcEEeeccccccCCC
Q 007107 544 ANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 544 ~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
+||+++ ++.++|+|||.+.....
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhccCC
Confidence 999999 88999999999875543
No 424
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.72 E-value=4.4e-17 Score=156.78 Aligned_cols=138 Identities=21% Similarity=0.307 Sum_probs=114.5
Q ss_pred ceeccCccceEEEEEEcCCcEEEEEEcCcccccH------HHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 416 FLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSL------QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
+.||+|++|.||+|.+ +|..+++|+........ .....+.+|++.+..+.|++|.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 4699999999999987 57788889765432211 1234678899999999999998888887778889999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
+++++|.+++... .. .+..++.+++.+|+++|+. +++|||++|+|||++ ++.++|+|||.+....
T Consensus 81 ~~G~~L~~~~~~~-------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~~ 145 (211)
T PRK14879 81 IEGEPLKDLINSN-------GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEFSK 145 (211)
T ss_pred eCCcCHHHHHHhc-------cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccCCC
Confidence 9999999988521 11 7788999999999999999 999999999999999 7899999999987543
No 425
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.72 E-value=2.2e-17 Score=161.54 Aligned_cols=199 Identities=22% Similarity=0.329 Sum_probs=131.7
Q ss_pred CCcccceeccCccceEEEEEEcC-CcEEEEEEcCccc-ccHHHHHHHHHHHHHhhcCCC----------CcccccceEEe
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAA-LSLQEEDNFLEAVSNMSRLRH----------PNIVTLAGYCA 478 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h----------~niv~l~~~~~ 478 (618)
.+...+.||.|+++.||.+.+.+ |+.+|+|.+.... ......+++++|.-....+.+ -.++-.++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 45567789999999999998875 8999999875433 233356777777766555433 12222223222
Q ss_pred e---------C---C-----eEEEEEEecCCCChhhhhhccc---CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 007107 479 E---------H---G-----QRLLVYEYVGNGNLHDMLHFAD---DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVH 538 (618)
Q Consensus 479 ~---------~---~-----~~~lv~e~~~~gsL~~~l~~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH 538 (618)
- . . ..+++|+-+ .++|.+++..-. .....+....+..+..|+++.+++||+. |++|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEe
Confidence 1 1 1 236788877 458888764311 1112244455677789999999999999 9999
Q ss_pred cCCCCCCeeecCCCCcEEeeccccccCCCCCccccccccccccccCcccccc--------CCccccchhhhHHHHHHHHH
Q 007107 539 RNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALS--------GIYTVKSDVYSFGVVMLELL 610 (618)
Q Consensus 539 ~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwSlG~il~ell 610 (618)
+||+|+|++++++|.++|.||+........... ...+..|.+||.... ..++.+.|.|++|+++|.|.
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~----~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW 244 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC----SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW 244 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG----GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCceeec----cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH
Confidence 999999999999999999999877654322111 234577999997744 24788999999999999999
Q ss_pred hCCCCCC
Q 007107 611 TGRKPLD 617 (618)
Q Consensus 611 tg~~Pf~ 617 (618)
.|+.||+
T Consensus 245 C~~lPf~ 251 (288)
T PF14531_consen 245 CGRLPFG 251 (288)
T ss_dssp HSS-STC
T ss_pred HccCCCC
Confidence 9999997
No 426
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.71 E-value=6.3e-17 Score=177.17 Aligned_cols=143 Identities=17% Similarity=0.303 Sum_probs=114.1
Q ss_pred hcCCcccceeccCccceEEEEEEcCCcEEEEEEcCccccc-----HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALS-----LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
...|...+.||+|+||.||+|.+.+...++.+++...... ....+.+.+|++.+..++|++++....++......
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 3445667899999999999998765444333323221111 12245688999999999999999888887777788
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++||||+++++|.+++. ....++.+++++|+|||+. +++||||||+|||+ +++.++|+|||+++
T Consensus 412 ~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred EEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCcccc
Confidence 99999999999998874 3467899999999999999 99999999999999 57799999999997
Q ss_pred cCCC
Q 007107 564 LTPN 567 (618)
Q Consensus 564 ~~~~ 567 (618)
....
T Consensus 476 ~~~~ 479 (535)
T PRK09605 476 YSDL 479 (535)
T ss_pred cCCc
Confidence 6543
No 427
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.71 E-value=4.2e-17 Score=155.44 Aligned_cols=134 Identities=21% Similarity=0.332 Sum_probs=108.4
Q ss_pred eeccCccceEEEEEEcCCcEEEEEEcCccccc------HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEec
Q 007107 417 LIGEGSLGRVYRAEFANGKIMAVKKIDNAALS------LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYV 490 (618)
Q Consensus 417 ~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 490 (618)
.||+|++|.||+|.+ +|..+++|........ .....++.+|++.+..++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999986 5778889986543211 112356788999999999888766666666677789999999
Q ss_pred CCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
++++|.+++... .. .++.+++.+|++||+. +++|||++|+||+++ ++.++++|||++....
T Consensus 80 ~g~~l~~~~~~~----~~-------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~~ 140 (199)
T TIGR03724 80 EGKPLKDVIEEG----ND-------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYSD 140 (199)
T ss_pred CCccHHHHHhhc----HH-------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCCC
Confidence 999999887421 10 7899999999999999 999999999999999 7899999999987654
No 428
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.71 E-value=4.8e-17 Score=154.71 Aligned_cols=139 Identities=18% Similarity=0.133 Sum_probs=107.6
Q ss_pred CCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccH--------------------HHHHHHHHHHHHhhcCCCCc-
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSL--------------------QEEDNFLEAVSNMSRLRHPN- 469 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~--------------------~~~~~~~~e~~~l~~l~h~n- 469 (618)
.|...+.||+|+||.||++...+|+.||||++....... ........|+..+..+.|++
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 366778899999999999998889999999865432110 01123567888888887774
Q ss_pred -ccccceEEeeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeee
Q 007107 470 -IVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL 548 (618)
Q Consensus 470 -iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl 548 (618)
+.+.++ ....++||||+++++|.++... .....++.+++.++.++|+. +|+||||||+||++
T Consensus 96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill 158 (198)
T cd05144 96 PVPKPID----WNRHAVVMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILV 158 (198)
T ss_pred CCCceee----cCCceEEEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEE
Confidence 333333 3456899999999998765420 23457888999999999998 99999999999999
Q ss_pred cCCCCcEEeeccccccCC
Q 007107 549 DDELNPHLSDCGLAALTP 566 (618)
Q Consensus 549 ~~~~~~kl~Dfgl~~~~~ 566 (618)
++++.++|+|||.+....
T Consensus 159 ~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 159 DDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred cCCCcEEEEECCccccCC
Confidence 999999999999986554
No 429
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.71 E-value=3.1e-18 Score=186.18 Aligned_cols=197 Identities=26% Similarity=0.283 Sum_probs=151.6
Q ss_pred CCcccceeccCccceEEEEEEcCCcEEEEEEcCccc--ccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAA--LSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
++...+.||++.|=.|.+|++.+|. |+||++-+.. .+.....+.++|++ ...++|||++++..+-..+...|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5667788999999999999998888 7788875443 34444455556666 566799999999888777778889999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc--CC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL--TP 566 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~--~~ 566 (618)
|+.. +|+|.+. ...-+..-+.+=|+.|++.|+..+|+. ||+|||||.+||||+.-.=+.|+||..-+. .+
T Consensus 102 yvkh-nLyDRlS----TRPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP 173 (1431)
T KOG1240|consen 102 YVKH-NLYDRLS----TRPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLP 173 (1431)
T ss_pred HHhh-hhhhhhc----cchHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCC
Confidence 9865 8888885 344466667777999999999999999 999999999999999988899999976532 22
Q ss_pred CCCccccc----cccccccccCccccccCC-----------ccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 567 NTERQVST----QMVGAFGYSAPEFALSGI-----------YTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~----~~~gt~~y~aPE~~~~~~-----------~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.+...-.+ .-..-..|.|||.+.... .+++-||||+||++.||++ |++||+
T Consensus 174 eDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~ 240 (1431)
T KOG1240|consen 174 EDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT 240 (1431)
T ss_pred CCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc
Confidence 22211111 112234699999886421 4678999999999999998 788885
No 430
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.71 E-value=1e-18 Score=178.08 Aligned_cols=185 Identities=25% Similarity=0.305 Sum_probs=160.8
Q ss_pred ceeEeeCCCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCC--CCCcceEecccccccccCCcccccCC
Q 007107 76 KGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQL--PPNLTSLNLASNNFSGNLPYSIASMV 153 (618)
Q Consensus 76 ~gv~c~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~--~~~L~~L~L~~N~l~~~~p~~~~~l~ 153 (618)
+|++....++..|+|+.|+++..-...+.+|+.|+.||||+|.|...-+..+ .++|+.|+|++|+|+..-+.+|..|.
T Consensus 262 DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~ 341 (873)
T KOG4194|consen 262 DGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLS 341 (873)
T ss_pred CcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHH
Confidence 4566555689999999999998888999999999999999999997766544 49999999999999999999999999
Q ss_pred CccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCC---CcccCCCcCeeeecccccccccc-ccCCC-CccEE
Q 007107 154 SLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPN---SFISLSNISSLYLQNNQVTGSLN-VFSGL-PLTTL 228 (618)
Q Consensus 154 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~---~~~~l~~L~~L~l~~N~l~~~~~-~~~~~-~L~~L 228 (618)
.|+.|+|++|+++..-...|..+.+|+.|||++|.|++.|.+ .|..|++|+.|+|.+|+|..... .+.+. .|+.|
T Consensus 342 ~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~L 421 (873)
T KOG4194|consen 342 QLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHL 421 (873)
T ss_pred HhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCccccee
Confidence 999999999999988889999999999999999999987754 47789999999999999997653 35554 49999
Q ss_pred EcccccccccCchhhh--cccchhccCCcCCCCC
Q 007107 229 NVANNHFSGWIPRELI--SIRTFIYDGNSFDNGP 260 (618)
Q Consensus 229 ~l~~N~l~g~ip~~~~--~l~~l~~~~N~~~~~~ 260 (618)
||.+|.|...-|..|. +|+.|-++.-.|.|.+
T Consensus 422 dL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCDC 455 (873)
T KOG4194|consen 422 DLGDNAIASIQPNAFEPMELKELVMNSSSFLCDC 455 (873)
T ss_pred cCCCCcceeecccccccchhhhhhhcccceEEec
Confidence 9999999988888775 4567778777777764
No 431
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.68 E-value=3.5e-17 Score=177.99 Aligned_cols=164 Identities=29% Similarity=0.443 Sum_probs=121.0
Q ss_pred hhcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
...+|+.++.+..|+||.||.++++. .+.+|+| +.+... +.+- ++.....|.+|
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l-------ilRn--ilt~a~npfvv--------------- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL-------ILRN--ILTFAGNPFVV--------------- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhc-ccccch-------hhhc--cccccCCccee---------------
Confidence 45689999999999999999998875 5667773 332211 1110 12222333333
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|+-.+.++ ..+.++. +++.+++|+|+. +|+|||+||+|.+|+.-|++|+.|||++....
T Consensus 136 ------gDc~tllk----~~g~lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GL 194 (1205)
T KOG0606|consen 136 ------GDCATLLK----NIGPLPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGL 194 (1205)
T ss_pred ------chhhhhcc----cCCCCcc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhh
Confidence 55556664 2333432 237789999999 99999999999999999999999999985321
Q ss_pred CC------Cc--------cccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NT------ER--------QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~------~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. +. -...+++||+.|.|||++....|+..+|+|++|+|+||.+.|..||.
T Consensus 195 ms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpff 259 (1205)
T KOG0606|consen 195 MSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFF 259 (1205)
T ss_pred hhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeecc
Confidence 00 00 11235699999999999999999999999999999999999999986
No 432
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.67 E-value=1.3e-16 Score=156.13 Aligned_cols=143 Identities=24% Similarity=0.334 Sum_probs=108.0
Q ss_pred CCCcccccceEEee---------------------------CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHH
Q 007107 466 RHPNIVTLAGYCAE---------------------------HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVA 518 (618)
Q Consensus 466 ~h~niv~l~~~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~ 518 (618)
+|||||++.++|.+ ...+|+||.-++. +|.+++. ....+.....-++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~-----~~~~s~r~~~~~l 347 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLW-----TRHRSYRTGRVIL 347 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHh-----cCCCchHHHHHHH
Confidence 69999999887743 2356899988754 8988885 3445666778899
Q ss_pred HHHHHHHHHHhhcCCCCceecCCCCCCeeec--CCC--CcEEeeccccccCCCC---Cccc--cccccccccccCccccc
Q 007107 519 LGTARALEYLHEVCLPSVVHRNFKSANILLD--DEL--NPHLSDCGLAALTPNT---ERQV--STQMVGAFGYSAPEFAL 589 (618)
Q Consensus 519 ~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~--~~~--~~kl~Dfgl~~~~~~~---~~~~--~~~~~gt~~y~aPE~~~ 589 (618)
.|+++|+.|||++ ||.|||+|++|||+. +|+ .+.|+|||.+---... -.+. .-..-|....||||+..
T Consensus 348 aQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~t 424 (598)
T KOG4158|consen 348 AQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIAT 424 (598)
T ss_pred HHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhh
Confidence 9999999999999 999999999999994 443 3578999987321110 0111 11235777889999986
Q ss_pred cCC------ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 590 SGI------YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 590 ~~~------~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..+ ...|+|.|+.|.+.||+++...||=
T Consensus 425 a~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY 458 (598)
T KOG4158|consen 425 AVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFY 458 (598)
T ss_pred cCCCCceeeccchhhhhhhhhhHHHHhccCCccc
Confidence 433 2458999999999999999999983
No 433
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.63 E-value=5.5e-17 Score=158.60 Aligned_cols=192 Identities=26% Similarity=0.336 Sum_probs=139.1
Q ss_pred CCCCCCC---ceeEeeCC-----------CEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcc
Q 007107 69 DPCGESW---KGVACEGS-----------AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLT 132 (618)
Q Consensus 69 ~~c~~~w---~gv~c~~~-----------~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~ 132 (618)
.+|.|+- .-|.|+.. ..+.|+|..|+|+.+.+.+|..+++|+.||||+|+|+.+-|..|. ++|.
T Consensus 39 ~pC~Cs~~~g~~VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~ 118 (498)
T KOG4237|consen 39 APCTCSDVEGGIVDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLL 118 (498)
T ss_pred CCcccCCCCCceEEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhh
Confidence 5666654 34889753 467899999999999999999999999999999999988887765 4444
Q ss_pred eE-ecccccccccCCcccccCCCcc------------------------EEEeecCCCCCch------------------
Q 007107 133 SL-NLASNNFSGNLPYSIASMVSLS------------------------YLNVSRNSLTQSI------------------ 169 (618)
Q Consensus 133 ~L-~L~~N~l~~~~p~~~~~l~~L~------------------------~L~L~~N~l~~~~------------------ 169 (618)
+| ++++|+|+...-..|++|.+|+ .|.|.+|.+..+-
T Consensus 119 ~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~n 198 (498)
T KOG4237|consen 119 SLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQN 198 (498)
T ss_pred HHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcC
Confidence 43 4455777743333444444443 3333333222100
Q ss_pred -------------------------------------------------------------------h-hhhcCCCCCCe
Q 007107 170 -------------------------------------------------------------------G-DIFGNLAGLAT 181 (618)
Q Consensus 170 -------------------------------------------------------------------p-~~~~~l~~L~~ 181 (618)
| ..|..|++|+.
T Consensus 199 p~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~ 278 (498)
T KOG4237|consen 199 PFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRK 278 (498)
T ss_pred ccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceE
Confidence 0 11445788889
Q ss_pred EEcccCcCCCCCCCCcccCCCcCeeeecccccccccc-ccCCC-CccEEEcccccccccCchhh---hcccchhccCCcC
Q 007107 182 LDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSGL-PLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSF 256 (618)
Q Consensus 182 L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~-~L~~L~l~~N~l~g~ip~~~---~~l~~l~~~~N~~ 256 (618)
|+|++|+|++.-+.+|.++..+++|+|..|+|...-. .+.+. .|+.|+|.+|+|+-.-|-.| .+|..|++.+|||
T Consensus 279 lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 279 LNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred eccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcc
Confidence 9999999998888888888999999999998876433 34443 49999999999998888665 5667899999999
Q ss_pred CCCC
Q 007107 257 DNGP 260 (618)
Q Consensus 257 ~~~~ 260 (618)
+|+.
T Consensus 359 ~CnC 362 (498)
T KOG4237|consen 359 NCNC 362 (498)
T ss_pred cCcc
Confidence 9975
No 434
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.62 E-value=2.3e-15 Score=141.83 Aligned_cols=138 Identities=21% Similarity=0.253 Sum_probs=96.4
Q ss_pred cceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHH----------------------HHHHHHhhcCCCCc--c
Q 007107 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNF----------------------LEAVSNMSRLRHPN--I 470 (618)
Q Consensus 415 ~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~----------------------~~e~~~l~~l~h~n--i 470 (618)
.+.||+|+||.||+|...+|+.||||++............+ ..|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 35799999999999998889999999886543221111111 24444444443332 3
Q ss_pred cccceEEeeCCeEEEEEEecCCCChhh-hhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCceecCCCCCCeee
Q 007107 471 VTLAGYCAEHGQRLLVYEYVGNGNLHD-MLHFADDSSKNLTWNARVRVALGTARALEYLHE-VCLPSVVHRNFKSANILL 548 (618)
Q Consensus 471 v~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~Dlkp~NiLl 548 (618)
.+.++. ...++||||++++.+.. .+... ... .....++.+++.++.++|. . +|+||||||+||++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~-----~~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili 148 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDV-----RLL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILV 148 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhh-----hhc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEE
Confidence 333332 34689999999854321 11100 001 5677899999999999999 7 99999999999999
Q ss_pred cCCCCcEEeeccccccCC
Q 007107 549 DDELNPHLSDCGLAALTP 566 (618)
Q Consensus 549 ~~~~~~kl~Dfgl~~~~~ 566 (618)
+ ++.++++|||.+....
T Consensus 149 ~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 149 D-DGKVYIIDVPQAVEID 165 (187)
T ss_pred E-CCcEEEEECccccccc
Confidence 9 8899999999996554
No 435
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.61 E-value=3.7e-17 Score=167.74 Aligned_cols=172 Identities=27% Similarity=0.324 Sum_probs=138.0
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC---CCcceEecccccccccCCcccccCCCccEEE
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP---PNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (618)
..++.|||++|+|. ..|..+..-+++-.|+||+|+|. .||..+. +.|-.||||+|++. .+|+.+..|..|+.|+
T Consensus 103 ~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~ 179 (1255)
T KOG0444|consen 103 KDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLK 179 (1255)
T ss_pred ccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhh
Confidence 46788899999886 46778888888888999999988 7787666 56778888888888 7788888888888888
Q ss_pred eecCCCC-------------------------CchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeecccccc
Q 007107 160 VSRNSLT-------------------------QSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVT 214 (618)
Q Consensus 160 L~~N~l~-------------------------~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 214 (618)
|++|.|. ..+|.++..|.+|..+|||+|+|. .+|+.+.++.+|+.|+||+|+|+
T Consensus 180 Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it 258 (1255)
T KOG0444|consen 180 LSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT 258 (1255)
T ss_pred cCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee
Confidence 8888543 125677778889999999999999 89999999999999999999998
Q ss_pred ccccc-cCCCCccEEEcccccccccCchhhhc---ccchhccCCcCCCC
Q 007107 215 GSLNV-FSGLPLTTLNVANNHFSGWIPRELIS---IRTFIYDGNSFDNG 259 (618)
Q Consensus 215 ~~~~~-~~~~~L~~L~l~~N~l~g~ip~~~~~---l~~l~~~~N~~~~~ 259 (618)
..--. -.-.+|++|+||.|+++ .+|+.+.+ |+.|+.++|.++..
T Consensus 259 eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~Fe 306 (1255)
T KOG0444|consen 259 ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFE 306 (1255)
T ss_pred eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCccccc
Confidence 63211 11235999999999999 88987655 55778888887654
No 436
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.61 E-value=4.5e-15 Score=134.34 Aligned_cols=135 Identities=19% Similarity=0.200 Sum_probs=112.4
Q ss_pred cceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCC--CcccccceEEeeCCeEEEEEEecCC
Q 007107 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH--PNIVTLAGYCAEHGQRLLVYEYVGN 492 (618)
Q Consensus 415 ~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~ 492 (618)
.+.||+|.++.||++...+ ..+++|....... ...+..|+..++.++| .++++++++....+..+++|||+++
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g 77 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEG 77 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCC
Confidence 4579999999999998864 7889999865432 4568888888888876 5888888888888889999999998
Q ss_pred CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 493 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
+.+..+ +......++.+++++++++|.....+++|+|++|+||++++.+.++++|||.++..
T Consensus 78 ~~~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 78 ETLDEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred eecccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 766543 44566778999999999999874447999999999999999899999999988643
No 437
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.61 E-value=4.1e-16 Score=159.22 Aligned_cols=173 Identities=22% Similarity=0.251 Sum_probs=144.2
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEee
Q 007107 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (618)
.+..|||++|.|+.+-+..|.+|++|+.++|.+|.++ .||.... .+|+.|+|.+|.|+..-.+++..++.|+.||||
T Consensus 79 ~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLS 157 (873)
T KOG4194|consen 79 QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLS 157 (873)
T ss_pred ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhh
Confidence 3566999999999999999999999999999999999 7886555 579999999999998878889999999999999
Q ss_pred cCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccc-cCC-CCccEEEcccccccc--
Q 007107 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFSG-- 237 (618)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~l~~N~l~g-- 237 (618)
.|.|+.+.-..|..-.++++|+|++|+|+..-...|.++.+|..|.|+.|+|+..+.. |.. ..|+.|+|..|+|.-
T Consensus 158 rN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive 237 (873)
T KOG4194|consen 158 RNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVE 237 (873)
T ss_pred hchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeeh
Confidence 9999977777888888999999999999977778888999999999999999985543 443 459999999998862
Q ss_pred -cCchhhhcccchhccCCcCC
Q 007107 238 -WIPRELISIRTFIYDGNSFD 257 (618)
Q Consensus 238 -~ip~~~~~l~~l~~~~N~~~ 257 (618)
.--..+.+|++|++..|.+.
T Consensus 238 ~ltFqgL~Sl~nlklqrN~I~ 258 (873)
T KOG4194|consen 238 GLTFQGLPSLQNLKLQRNDIS 258 (873)
T ss_pred hhhhcCchhhhhhhhhhcCcc
Confidence 12234566777888777644
No 438
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.60 E-value=1.6e-15 Score=157.91 Aligned_cols=151 Identities=29% Similarity=0.507 Sum_probs=126.3
Q ss_pred hhcCCCCcccccceEEeeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCc-eecC
Q 007107 462 MSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSV-VHRN 540 (618)
Q Consensus 462 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i-iH~D 540 (618)
|+.+.|.|+.+++|.+.+....+.|.+|+..|+|.|.+.. ....+++.-...++.+|+.||+|+|.- .| .|+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~---~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~ 74 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN---EDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGA 74 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc---cccCccHHHHHHHHHHHHHHHHHHhcC---cceeeee
Confidence 4567899999999999999999999999999999999963 467789999999999999999999987 44 9999
Q ss_pred CCCCCeeecCCCCcEEeeccccccCCCC-CccccccccccccccCccccccCC-------ccccchhhhHHHHHHHHHhC
Q 007107 541 FKSANILLDDELNPHLSDCGLAALTPNT-ERQVSTQMVGAFGYSAPEFALSGI-------YTVKSDVYSFGVVMLELLTG 612 (618)
Q Consensus 541 lkp~NiLl~~~~~~kl~Dfgl~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~DvwSlG~il~elltg 612 (618)
++++|++++....+||+|||+....... .........-..-|.|||.+.... .+.+.||||||++++|++++
T Consensus 75 l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r 154 (484)
T KOG1023|consen 75 LKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFR 154 (484)
T ss_pred eccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhc
Confidence 9999999999999999999998766421 111111122345699999997642 35679999999999999999
Q ss_pred CCCCCC
Q 007107 613 RKPLDR 618 (618)
Q Consensus 613 ~~Pf~~ 618 (618)
+.||+.
T Consensus 155 ~~~~~~ 160 (484)
T KOG1023|consen 155 SGPFDL 160 (484)
T ss_pred cCcccc
Confidence 999973
No 439
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.60 E-value=7.7e-15 Score=143.00 Aligned_cols=138 Identities=15% Similarity=0.182 Sum_probs=106.4
Q ss_pred ceec-cCccceEEEEEEcCCcEEEEEEcCcccc-----------cHHHHHHHHHHHHHhhcCCCCcc--cccceEEeeCC
Q 007107 416 FLIG-EGSLGRVYRAEFANGKIMAVKKIDNAAL-----------SLQEEDNFLEAVSNMSRLRHPNI--VTLAGYCAEHG 481 (618)
Q Consensus 416 ~~Lg-~G~~g~Vy~~~~~~g~~vavK~~~~~~~-----------~~~~~~~~~~e~~~l~~l~h~ni--v~l~~~~~~~~ 481 (618)
.+|| .|+.|+||.++.. +..+++|++..... .......+.+|++.+.++.|++| ++.+++.....
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 4687 8999999999875 77888998854221 11234567889999999998885 66666644322
Q ss_pred ----eEEEEEEecCC-CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEE
Q 007107 482 ----QRLLVYEYVGN-GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHL 556 (618)
Q Consensus 482 ----~~~lv~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl 556 (618)
..++|||++++ .+|.+++.. ..++.. .+.+++.++++||+. ||+||||||+|||++.++.++|
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~-----~~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~L 183 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQE-----APLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWL 183 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhc-----CCCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEE
Confidence 23599999997 689888752 334443 356899999999999 9999999999999999889999
Q ss_pred eeccccccCC
Q 007107 557 SDCGLAALTP 566 (618)
Q Consensus 557 ~Dfgl~~~~~ 566 (618)
+|||.++...
T Consensus 184 IDfg~~~~~~ 193 (239)
T PRK01723 184 IDFDRGELRT 193 (239)
T ss_pred EECCCcccCC
Confidence 9999987654
No 440
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.60 E-value=9.3e-15 Score=162.55 Aligned_cols=210 Identities=20% Similarity=0.292 Sum_probs=130.0
Q ss_pred hhhccCCChHHHHHHHHHHHhCCCCCCCCC----CCCCCCCCCCCCC--------------ceeEeeCCCE---------
Q 007107 33 SLVQCTTDSSDVQALQVLYTSLNSPSVLTN----WKGNEGDPCGESW--------------KGVACEGSAV--------- 85 (618)
Q Consensus 33 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~----w~~~~~~~c~~~w--------------~gv~c~~~~v--------- 85 (618)
......+..+|.+.+.++.+.+..|.++.+ |++. .+.|.-.- ..|.|.+..|
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~-~~fc~~~~~~~~~l~~~~~~~~~tv~~~~~~vt~l~~~g~~ 132 (754)
T PRK15370 54 CHPPETASPEEIKSKFECLRMLAFPAYADNIQYSRGGA-DQYCILSENSQEILSIVFNTEGYTVEGGGKSVTYTRVTESE 132 (754)
T ss_pred hCCCCCCCHHHHHHHHHHHHHhcCCchhhccccccCCC-CcccccCCcchhhheeeecCCceEEecCCCccccccccccc
Confidence 344556778999999999999999988877 9864 57885322 2377755443
Q ss_pred ------------------------------------------------EEEEcCCCCCcccccccccCCCCCCEEeecCC
Q 007107 86 ------------------------------------------------VSIDISGLGLSGTMGYLLSDLLSLRKFDLSGN 117 (618)
Q Consensus 86 ------------------------------------------------~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N 117 (618)
+.|+|++++|+. +|..+. ++|+.|+|++|
T Consensus 133 ~~~~~~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N 209 (754)
T PRK15370 133 QASSASGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLTT-IPACIP--EQITTLILDNN 209 (754)
T ss_pred ccccCCCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcCc-CCcccc--cCCcEEEecCC
Confidence 345666666654 344332 46777777777
Q ss_pred CCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCc
Q 007107 118 SIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSF 197 (618)
Q Consensus 118 ~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~ 197 (618)
+|+ .+|..+.++|+.|+|++|+|+ .+|..+. .+|+.|+|++|+++ .+|..+. .+|+.|+|++|+|+ .+|..+
T Consensus 210 ~Lt-sLP~~l~~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l 281 (754)
T PRK15370 210 ELK-SLPENLQGNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENL 281 (754)
T ss_pred CCC-cCChhhccCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-cccccc
Confidence 777 566666677777777777777 4555443 35777777777776 4455443 46777777777777 466655
Q ss_pred ccCCCcCeeeeccccccccccccCCCCccEEEcccccccccCch-hhhcccchhccCCcCCC
Q 007107 198 ISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPR-ELISIRTFIYDGNSFDN 258 (618)
Q Consensus 198 ~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip~-~~~~l~~l~~~~N~~~~ 258 (618)
. .+|+.|+|++|+|++.+..+ ...|+.|+|++|+|++ +|. ...+|+.|.+++|.+.+
T Consensus 282 ~--~sL~~L~Ls~N~Lt~LP~~l-p~sL~~L~Ls~N~Lt~-LP~~l~~sL~~L~Ls~N~Lt~ 339 (754)
T PRK15370 282 P--EELRYLSVYDNSIRTLPAHL-PSGITHLNVQSNSLTA-LPETLPPGLKTLEAGENALTS 339 (754)
T ss_pred C--CCCcEEECCCCccccCcccc-hhhHHHHHhcCCcccc-CCccccccceeccccCCcccc
Confidence 3 36777777777776533211 1235555555555552 332 22345555555555444
No 441
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.59 E-value=2.5e-16 Score=160.55 Aligned_cols=123 Identities=26% Similarity=0.418 Sum_probs=107.7
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccc
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl 561 (618)
..++.|+++...+|.+++... ......++.....++.|++.|++| + +.+|||+||.||....+..+||.|||+
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr-~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRR-RTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCC-CcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhh
Confidence 578999999999999999633 345567888899999999999999 5 889999999999999999999999999
Q ss_pred cccCCCCC-----ccccccccccccccCccccccCCccccchhhhHHHHHHHHHh
Q 007107 562 AALTPNTE-----RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT 611 (618)
Q Consensus 562 ~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt 611 (618)
........ ....+...||..||+||.+.+..|+.|+||||||+|++|+++
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 97765544 223455689999999999999999999999999999999987
No 442
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.58 E-value=9.9e-17 Score=139.51 Aligned_cols=155 Identities=30% Similarity=0.486 Sum_probs=137.6
Q ss_pred cccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCC
Q 007107 102 LLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGL 179 (618)
Q Consensus 102 ~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 179 (618)
.+.++.+.+.|.||+|+++ .+|..+. .+|+.|++++|+++ .+|.+++++++|+.|+++-|++. ..|..|+.++.|
T Consensus 28 gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~l 104 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPAL 104 (264)
T ss_pred cccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchh
Confidence 4567888999999999999 7777776 89999999999999 89999999999999999999998 889999999999
Q ss_pred CeEEcccCcCCC-CCCCCcccCCCcCeeeeccccccccccccCC-CCccEEEcccccccccCchhhh---cccchhccCC
Q 007107 180 ATLDLSFNNFSG-DLPNSFISLSNISSLYLQNNQVTGSLNVFSG-LPLTTLNVANNHFSGWIPRELI---SIRTFIYDGN 254 (618)
Q Consensus 180 ~~L~l~~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~l~~N~l~g~ip~~~~---~l~~l~~~~N 254 (618)
+.|||.+|+++. .+|..|..|..|+-|+|+.|.+.-.++.... .+|+.|.+..|.+- .+|.+++ +|+.|...||
T Consensus 105 evldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhhccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 999999999974 6799999999999999999999987776655 46999999999998 7887765 5567889999
Q ss_pred cCCCCC
Q 007107 255 SFDNGP 260 (618)
Q Consensus 255 ~~~~~~ 260 (618)
.+.--|
T Consensus 184 rl~vlp 189 (264)
T KOG0617|consen 184 RLTVLP 189 (264)
T ss_pred eeeecC
Confidence 987654
No 443
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.57 E-value=1.5e-16 Score=163.24 Aligned_cols=171 Identities=23% Similarity=0.341 Sum_probs=109.8
Q ss_pred CEEEEEcCCCCCc-ccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEe
Q 007107 84 AVVSIDISGLGLS-GTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (618)
Q Consensus 84 ~v~~l~l~~~~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 160 (618)
-|..+|+++|.++ +..|.....+++++.|-|...++. .+|.+++ .+|+.|.+++|++. .+-..++.|+.|+.+++
T Consensus 8 FVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~ 85 (1255)
T KOG0444|consen 8 FVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIV 85 (1255)
T ss_pred eeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhh
Confidence 3566677777776 466666777777777777776666 5666665 66777777777776 44556666777777777
Q ss_pred ecCCCC-CchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccc-cCCC-CccEEEcccccccc
Q 007107 161 SRNSLT-QSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSGL-PLTTLNVANNHFSG 237 (618)
Q Consensus 161 ~~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~-~L~~L~l~~N~l~g 237 (618)
.+|+|. .-||..+-.|..|+.||||+|+|. ..|..+..-.++-+|+||+|+|..++.. +... .|-.||||+|++.
T Consensus 86 R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe- 163 (1255)
T KOG0444|consen 86 RDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE- 163 (1255)
T ss_pred hccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-
Confidence 777665 234555556677777777777776 6676666666777777777777665533 2222 3666777777776
Q ss_pred cCchhh---hcccchhccCCcCCC
Q 007107 238 WIPREL---ISIRTFIYDGNSFDN 258 (618)
Q Consensus 238 ~ip~~~---~~l~~l~~~~N~~~~ 258 (618)
.+|+.+ ..|+.|.+++||+.-
T Consensus 164 ~LPPQ~RRL~~LqtL~Ls~NPL~h 187 (1255)
T KOG0444|consen 164 MLPPQIRRLSMLQTLKLSNNPLNH 187 (1255)
T ss_pred hcCHHHHHHhhhhhhhcCCChhhH
Confidence 555544 344566677776543
No 444
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.54 E-value=9.8e-16 Score=167.13 Aligned_cols=202 Identities=26% Similarity=0.334 Sum_probs=161.5
Q ss_pred cCCcccceeccCccceEEEEEEcC--CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-CCcccccceEEeeCCeEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFAN--GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~--g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 486 (618)
..|...+.||+|+|+.|-...... ...+|.|.+...............|..+-..+. |+|++.+++.....+..+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 456666679999999998886643 345666666544323333445556777777776 99999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCC-CCCHHHHHHHHHHHHHHHHHHh-hcCCCCceecCCCCCCeeecCCC-CcEEeeccccc
Q 007107 487 YEYVGNGNLHDMLHFADDSSK-NLTWNARVRVALGTARALEYLH-EVCLPSVVHRNFKSANILLDDEL-NPHLSDCGLAA 563 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~-~l~~~~~~~i~~~i~~~L~~LH-~~~~~~iiH~Dlkp~NiLl~~~~-~~kl~Dfgl~~ 563 (618)
+||..++++.+-+. .... ..+......++.|+..++.|+| +. ++.|||+||+|.+++..+ ..+++|||+|.
T Consensus 100 ~~~s~g~~~f~~i~---~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At 173 (601)
T KOG0590|consen 100 LSYSDGGSLFSKIS---HPDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLAT 173 (601)
T ss_pred cCcccccccccccc---cCCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhc
Confidence 99999999998873 1222 5566677889999999999999 77 999999999999999999 99999999998
Q ss_pred cCCC--CCccccccccc-cccccCccccccCC-ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPN--TERQVSTQMVG-AFGYSAPEFALSGI-YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~--~~~~~~~~~~g-t~~y~aPE~~~~~~-~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.+.. .........+| ++.|+|||...+.. ..+..|+||.|+++.-+++|..|++
T Consensus 174 ~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~ 231 (601)
T KOG0590|consen 174 AYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWD 231 (601)
T ss_pred cccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcc
Confidence 7655 22333344578 99999999998854 4678999999999999999999986
No 445
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.50 E-value=1.4e-16 Score=155.89 Aligned_cols=169 Identities=23% Similarity=0.342 Sum_probs=140.4
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC-CCcceEecccccccccCCcccccCCCccEEEeec
Q 007107 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP-PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (618)
.+..++..+|+++ .+|+.++++.+|..|++.+|++....|..+. +.|+.||+..|-+. .+|+.++.+.+|.-|||.+
T Consensus 138 ~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~ 215 (565)
T KOG0472|consen 138 DLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRR 215 (565)
T ss_pred hhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhh
Confidence 4566777888886 5688899999999999999999955555444 88999999999888 8899999999999999999
Q ss_pred CCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcc-cCCCcCeeeeccccccccccccCC-CCccEEEcccccccccCc
Q 007107 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFI-SLSNISSLYLQNNQVTGSLNVFSG-LPLTTLNVANNHFSGWIP 240 (618)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~l~~N~l~g~ip 240 (618)
|+|. ..| +|+++..|.+|+++.|+|+ .+|.+.. ++..|.+|||..|+++..+..... .+|+.||||+|.|+ .+|
T Consensus 216 Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklke~Pde~clLrsL~rLDlSNN~is-~Lp 291 (565)
T KOG0472|consen 216 NKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLKEVPDEICLLRSLERLDLSNNDIS-SLP 291 (565)
T ss_pred cccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccccCchHHHHhhhhhhhcccCCccc-cCC
Confidence 9998 455 7899999999999999999 8888776 889999999999999976654433 45999999999999 678
Q ss_pred hhhhcc--cchhccCCcCCC
Q 007107 241 RELISI--RTFIYDGNSFDN 258 (618)
Q Consensus 241 ~~~~~l--~~l~~~~N~~~~ 258 (618)
.+++++ ++|.+.|||+..
T Consensus 292 ~sLgnlhL~~L~leGNPlrT 311 (565)
T KOG0472|consen 292 YSLGNLHLKFLALEGNPLRT 311 (565)
T ss_pred cccccceeeehhhcCCchHH
Confidence 777765 577888998654
No 446
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.49 E-value=4.3e-14 Score=157.25 Aligned_cols=162 Identities=27% Similarity=0.351 Sum_probs=98.3
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeecC
Q 007107 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRN 163 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 163 (618)
+++.|+|++|+|+. +|..+. .+|+.|+|++|++. .+|..++++|+.|+|++|+|+ .+|..+. ++|+.|+|++|
T Consensus 221 nL~~L~Ls~N~Lts-LP~~l~--~~L~~L~Ls~N~L~-~LP~~l~s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N 293 (754)
T PRK15370 221 NIKTLYANSNQLTS-IPATLP--DTIQEMELSINRIT-ELPERLPSALQSLDLFHNKIS-CLPENLP--EELRYLSVYDN 293 (754)
T ss_pred CCCEEECCCCcccc-CChhhh--ccccEEECcCCccC-cCChhHhCCCCEEECcCCccC-ccccccC--CCCcEEECCCC
Confidence 67888888888874 455443 36777888888777 567666677777777777777 4566553 46777777777
Q ss_pred CCCCchhhhhc-------------------CCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCC
Q 007107 164 SLTQSIGDIFG-------------------NLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP 224 (618)
Q Consensus 164 ~l~~~~p~~~~-------------------~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~ 224 (618)
+|++. |..+. -.++|+.|++++|.|+ .+|..+. ++|+.|+|++|+|+..+ ......
T Consensus 294 ~Lt~L-P~~lp~sL~~L~Ls~N~Lt~LP~~l~~sL~~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~L~~LP-~~lp~~ 368 (754)
T PRK15370 294 SIRTL-PAHLPSGITHLNVQSNSLTALPETLPPGLKTLEAGENALT-SLPASLP--PELQVLDVSKNQITVLP-ETLPPT 368 (754)
T ss_pred ccccC-cccchhhHHHHHhcCCccccCCccccccceeccccCCccc-cCChhhc--CcccEEECCCCCCCcCC-hhhcCC
Confidence 77743 33221 1134555555555555 3444432 45666666666665422 222235
Q ss_pred ccEEEcccccccccCchhh-hcccchhccCCcCCC
Q 007107 225 LTTLNVANNHFSGWIPREL-ISIRTFIYDGNSFDN 258 (618)
Q Consensus 225 L~~L~l~~N~l~g~ip~~~-~~l~~l~~~~N~~~~ 258 (618)
|+.|+|++|+|+ .+|+.+ ..|+.|++.+|.+..
T Consensus 369 L~~LdLs~N~Lt-~LP~~l~~sL~~LdLs~N~L~~ 402 (754)
T PRK15370 369 ITTLDVSRNALT-NLPENLPAALQIMQASRNNLVR 402 (754)
T ss_pred cCEEECCCCcCC-CCCHhHHHHHHHHhhccCCccc
Confidence 666666666666 445444 345666666666653
No 447
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.47 E-value=1.7e-13 Score=151.75 Aligned_cols=33 Identities=21% Similarity=0.332 Sum_probs=19.5
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCC
Q 007107 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIH 120 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~ 120 (618)
+++.|++++|+|+. +|. .+++|++|+|++|+|+
T Consensus 223 ~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt 255 (788)
T PRK15387 223 HITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT 255 (788)
T ss_pred CCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC
Confidence 45666666666654 332 2456666666666666
No 448
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.46 E-value=2.7e-13 Score=143.63 Aligned_cols=143 Identities=22% Similarity=0.260 Sum_probs=99.9
Q ss_pred cceeccCccceEEEEEEcCCcEEEEEEcCcccccHH--------------------------------------HHHHHH
Q 007107 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQ--------------------------------------EEDNFL 456 (618)
Q Consensus 415 ~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~--------------------------------------~~~~~~ 456 (618)
.+.||.|++|+||+|.+.+|+.||||+.+......- .+-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 357999999999999999999999999865421100 011344
Q ss_pred HHHHHhhcC----CCCcccccceEE-eeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHH-HHHHHhh
Q 007107 457 EAVSNMSRL----RHPNIVTLAGYC-AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR-ALEYLHE 530 (618)
Q Consensus 457 ~e~~~l~~l----~h~niv~l~~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~-~L~~LH~ 530 (618)
.|.+.+.++ +|.+-+.+-.++ ...+..++||||++|++|.++..... ...+ ..+++.+++. .+..+|.
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~---~~~~---~~~ia~~~~~~~l~ql~~ 275 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE---AGLD---RKALAENLARSFLNQVLR 275 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh---cCCC---HHHHHHHHHHHHHHHHHh
Confidence 555555444 232222222222 23456799999999999988764211 1122 3456666665 4788898
Q ss_pred cCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 531 VCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 531 ~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
. |++|+|++|.||++++++.++++|||++....
T Consensus 276 ~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 276 D---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred C---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 8 99999999999999999999999999997665
No 449
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.45 E-value=2.5e-13 Score=150.29 Aligned_cols=161 Identities=22% Similarity=0.350 Sum_probs=101.4
Q ss_pred EeeCCCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEE
Q 007107 79 ACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYL 158 (618)
Q Consensus 79 ~c~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 158 (618)
.|-...-..|+|++++|+ .+|+.+. ++|+.|+|++|+|+ .+|. +.++|++|+|++|+|+ .+|.. .++|+.|
T Consensus 197 ~Cl~~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~-lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L 267 (788)
T PRK15387 197 ACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA-LPPELRTLEVSGNQLT-SLPVL---PPGLLEL 267 (788)
T ss_pred HHhcCCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCC-CCCCCcEEEecCCccC-cccCc---cccccee
Confidence 354455667999999998 5777775 48999999999999 4664 5689999999999999 45643 3567777
Q ss_pred EeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccc-------------------cc
Q 007107 159 NVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSL-------------------NV 219 (618)
Q Consensus 159 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~-------------------~~ 219 (618)
+|++|.|+. +|..+ ++|+.|+|++|+|+ .+|.. .++|+.|+|++|+|++.+ |.
T Consensus 268 ~Ls~N~L~~-Lp~lp---~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~Lp~lp~~L~~L~Ls~N~L~~LP~ 339 (788)
T PRK15387 268 SIFSNPLTH-LPALP---SGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPT 339 (788)
T ss_pred eccCCchhh-hhhch---hhcCEEECcCCccc-ccccc---ccccceeECCCCccccCCCCcccccccccccCccccccc
Confidence 777777663 33321 33444555555554 33331 234444455444444421 11
Q ss_pred cCCCCccEEEcccccccccCchhhhcccchhccCCcCCC
Q 007107 220 FSGLPLTTLNVANNHFSGWIPRELISIRTFIYDGNSFDN 258 (618)
Q Consensus 220 ~~~~~L~~L~l~~N~l~g~ip~~~~~l~~l~~~~N~~~~ 258 (618)
...+|+.|+|++|+|+ .+|....++..|++.+|.+..
T Consensus 340 -lp~~Lq~LdLS~N~Ls-~LP~lp~~L~~L~Ls~N~L~~ 376 (788)
T PRK15387 340 -LPSGLQELSVSDNQLA-SLPTLPSELYKLWAYNNRLTS 376 (788)
T ss_pred -cccccceEecCCCccC-CCCCCCcccceehhhcccccc
Confidence 1124677777777776 455555566666666666554
No 450
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.43 E-value=2.8e-15 Score=153.10 Aligned_cols=170 Identities=30% Similarity=0.427 Sum_probs=148.7
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEee
Q 007107 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (618)
..+..||+.|++. .+|..+..+..|+.|.|+.|.|. .+|..+. ..|++|||+.|+++ .+|..++.|+ |+.|-++
T Consensus 76 dt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~s 151 (722)
T KOG0532|consen 76 DTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVS 151 (722)
T ss_pred chhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEe
Confidence 4566889999986 67888899999999999999998 7777766 78999999999999 8888888875 8999999
Q ss_pred cCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCCccEEEcccccccccCch
Q 007107 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPR 241 (618)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip~ 241 (618)
+|+++ .+|+.++.+..|..||.+.|++. .+|..++.+.+|+.|.+..|++...++.+...+|..||+|+|+++ .||-
T Consensus 152 NNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~lp~El~~LpLi~lDfScNkis-~iPv 228 (722)
T KOG0532|consen 152 NNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLEDLPEELCSLPLIRLDFSCNKIS-YLPV 228 (722)
T ss_pred cCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhhCCHHHhCCceeeeecccCcee-ecch
Confidence 99998 77888888999999999999999 899999999999999999999999888877888999999999999 8998
Q ss_pred hhhcc---cchhccCCcCCCCC
Q 007107 242 ELISI---RTFIYDGNSFDNGP 260 (618)
Q Consensus 242 ~~~~l---~~l~~~~N~~~~~~ 260 (618)
.|.++ +.|.+.+||+.-.+
T Consensus 229 ~fr~m~~Lq~l~LenNPLqSPP 250 (722)
T KOG0532|consen 229 DFRKMRHLQVLQLENNPLQSPP 250 (722)
T ss_pred hhhhhhhheeeeeccCCCCCCh
Confidence 87655 56788999987654
No 451
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.38 E-value=2.8e-14 Score=153.53 Aligned_cols=171 Identities=25% Similarity=0.318 Sum_probs=137.9
Q ss_pred EEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCC----------------------------CCCcceEec
Q 007107 85 VVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQL----------------------------PPNLTSLNL 136 (618)
Q Consensus 85 v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~----------------------------~~~L~~L~L 136 (618)
++.|++..|.+. .+|+.+..++.|++|+|..|+|. ..|..+ .+.|+.|+|
T Consensus 289 L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~Lyl 366 (1081)
T KOG0618|consen 289 LVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYL 366 (1081)
T ss_pred HHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHH
Confidence 444556666664 45667777777777777777776 333211 146888999
Q ss_pred ccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeecccccccc
Q 007107 137 ASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGS 216 (618)
Q Consensus 137 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~ 216 (618)
.+|.|+...-+.+.+..+|+.|+|++|+|.......+.++..|++|+||+|+|+ .+|.++..+..|++|...+|+|...
T Consensus 367 anN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~~f 445 (1081)
T KOG0618|consen 367 ANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLLSF 445 (1081)
T ss_pred hcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCceeec
Confidence 999999887778899999999999999999666678899999999999999999 8999999999999999999999987
Q ss_pred ccccCCCCccEEEcccccccc-cCchhh--hcccchhccCCcCCC
Q 007107 217 LNVFSGLPLTTLNVANNHFSG-WIPREL--ISIRTFIYDGNSFDN 258 (618)
Q Consensus 217 ~~~~~~~~L~~L~l~~N~l~g-~ip~~~--~~l~~l~~~~N~~~~ 258 (618)
+.......|+.+|||.|+|+- .+|... ++|+.|+++||.+.-
T Consensus 446 Pe~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l~ 490 (1081)
T KOG0618|consen 446 PELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRLV 490 (1081)
T ss_pred hhhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcccc
Confidence 755556679999999999974 556544 589999999999644
No 452
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.38 E-value=1.1e-14 Score=142.89 Aligned_cols=154 Identities=25% Similarity=0.357 Sum_probs=136.4
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEee
Q 007107 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (618)
+++.+++.+|.+....|..+. ++.|++||...|-++ .+|.+++ .+|+.|||..|+|. .+| +|.+|..|++|+++
T Consensus 161 ~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g 236 (565)
T KOG0472|consen 161 KLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVG 236 (565)
T ss_pred HHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhc
Confidence 456789999999876666665 999999999999998 8888887 89999999999999 777 99999999999999
Q ss_pred cCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCCccEEEcccccccccCch
Q 007107 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPR 241 (618)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip~ 241 (618)
.|+|.-...+....+++|..|||.+|++. ..|++++-+.+|+.||+|+|.|++.+..+..+.|+.|-|.+|.+. .|-.
T Consensus 237 ~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~Lp~sLgnlhL~~L~leGNPlr-TiRr 314 (565)
T KOG0472|consen 237 ENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISSLPYSLGNLHLKFLALEGNPLR-TIRR 314 (565)
T ss_pred ccHHHhhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccccCCcccccceeeehhhcCCchH-HHHH
Confidence 99999444444559999999999999999 899999999999999999999999998888889999999999997 4444
Q ss_pred hh
Q 007107 242 EL 243 (618)
Q Consensus 242 ~~ 243 (618)
++
T Consensus 315 ~i 316 (565)
T KOG0472|consen 315 EI 316 (565)
T ss_pred HH
Confidence 44
No 453
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.36 E-value=8.1e-13 Score=141.44 Aligned_cols=148 Identities=15% Similarity=0.180 Sum_probs=94.8
Q ss_pred hcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccH--------------------------------HH----
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSL--------------------------------QE---- 451 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~--------------------------------~~---- 451 (618)
-.+|+. +.||+|++|+||+|.+++ |+.||||+.+...... +.
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345665 689999999999999988 9999999997542100 00
Q ss_pred --HHHHHHHHHHhhcC----CCCcccccceEEee-CCeEEEEEEecCCCChhhhhhcccCC--CCCCCHHHHHHHHHHHH
Q 007107 452 --EDNFLEAVSNMSRL----RHPNIVTLAGYCAE-HGQRLLVYEYVGNGNLHDMLHFADDS--SKNLTWNARVRVALGTA 522 (618)
Q Consensus 452 --~~~~~~e~~~l~~l----~h~niv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~--~~~l~~~~~~~i~~~i~ 522 (618)
+-++.+|+..+.++ .+...+.+-.++.+ ....++||||++|+.+.++....... ...+....+..++.|
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q-- 275 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ-- 275 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH--
Confidence 11234444444433 23333333333322 45678999999999998753211100 012222333333333
Q ss_pred HHHHHHhhcCCCCceecCCCCCCeeecCCC----CcEEeeccccccCCC
Q 007107 523 RALEYLHEVCLPSVVHRNFKSANILLDDEL----NPHLSDCGLAALTPN 567 (618)
Q Consensus 523 ~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~----~~kl~Dfgl~~~~~~ 567 (618)
+... |++|+|+||.||+++.++ .++++|||++.....
T Consensus 276 -----if~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 276 -----VFRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred -----HHhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 3345 999999999999999888 999999999976643
No 454
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.32 E-value=3.7e-13 Score=138.24 Aligned_cols=178 Identities=25% Similarity=0.386 Sum_probs=132.4
Q ss_pred CCCEEEEEcCCCCCcccccccccCCCC---CCEEeecCCCCCCCCC-------CCCCCCcceEeccccccccc----CCc
Q 007107 82 GSAVVSIDISGLGLSGTMGYLLSDLLS---LRKFDLSGNSIHDTIP-------YQLPPNLTSLNLASNNFSGN----LPY 147 (618)
Q Consensus 82 ~~~v~~l~l~~~~l~~~~~~~l~~l~~---L~~L~L~~N~l~~~~p-------~~~~~~L~~L~L~~N~l~~~----~p~ 147 (618)
..+++.|+|++|.+.+..+..+..+.+ |++|+|++|++++... ....++|+.|+|++|++++. ++.
T Consensus 80 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~ 159 (319)
T cd00116 80 GCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAK 159 (319)
T ss_pred cCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHH
Confidence 358999999999998777777776666 9999999999883211 12227899999999999943 445
Q ss_pred ccccCCCccEEEeecCCCCCc----hhhhhcCCCCCCeEEcccCcCCCC----CCCCcccCCCcCeeeecccccccc-c-
Q 007107 148 SIASMVSLSYLNVSRNSLTQS----IGDIFGNLAGLATLDLSFNNFSGD----LPNSFISLSNISSLYLQNNQVTGS-L- 217 (618)
Q Consensus 148 ~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~-~- 217 (618)
.+..+++|+.|+|++|.+++. ++..+..+++|+.|+|++|.+++. ++..+..+++|++|++++|++++. +
T Consensus 160 ~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~ 239 (319)
T cd00116 160 ALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAA 239 (319)
T ss_pred HHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHH
Confidence 567788999999999999853 445566678999999999998743 334566788999999999999862 1
Q ss_pred c---cc--CCCCccEEEccccccc--c--cCchh---hhcccchhccCCcCCCC
Q 007107 218 N---VF--SGLPLTTLNVANNHFS--G--WIPRE---LISIRTFIYDGNSFDNG 259 (618)
Q Consensus 218 ~---~~--~~~~L~~L~l~~N~l~--g--~ip~~---~~~l~~l~~~~N~~~~~ 259 (618)
. .+ ....|+.|++++|.++ | .+... +.+++.+++++|.+.-.
T Consensus 240 ~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~ 293 (319)
T cd00116 240 ALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEE 293 (319)
T ss_pred HHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHH
Confidence 1 11 1246999999999997 2 22233 35678888888887753
No 455
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.30 E-value=1.1e-11 Score=114.74 Aligned_cols=132 Identities=20% Similarity=0.142 Sum_probs=94.7
Q ss_pred cceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCccc-ccceEEeeCCeEEEEEEecCCC
Q 007107 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIV-TLAGYCAEHGQRLLVYEYVGNG 493 (618)
Q Consensus 415 ~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~g 493 (618)
.+.++.|.++.||++... ++.+++|....... ....+..|++.++.+.+.+++ +++.+. ....++||||+++.
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~ 76 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGS 76 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCC
Confidence 346889999999999875 77899998764431 123456777777777655544 344433 33458999999998
Q ss_pred ChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 494 NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC--LPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 494 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
++.+.. . ....++.+++++|+.||+.. ..+++|+|++|.||+++ ++.++++|||.+...
T Consensus 77 ~l~~~~---------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~ 137 (170)
T cd05151 77 ELLTED---------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMN 137 (170)
T ss_pred cccccc---------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccCC
Confidence 775421 0 11235678999999999982 11259999999999999 668999999998643
No 456
>PLN03150 hypothetical protein; Provisional
Probab=99.29 E-value=4.4e-12 Score=140.63 Aligned_cols=107 Identities=26% Similarity=0.339 Sum_probs=85.1
Q ss_pred CccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeecccccccccccc-CC-CCccEEEcc
Q 007107 154 SLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVF-SG-LPLTTLNVA 231 (618)
Q Consensus 154 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~-~~L~~L~l~ 231 (618)
.++.|+|++|.++|.+|..++.+++|+.|+|++|+|+|.+|..++.+++|+.|+|++|+|+|.+|.. .. .+|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 3677888888888888888888888888888888888888888888888888888888888876652 22 358888888
Q ss_pred cccccccCchhhhc----ccchhccCCcCCCCC
Q 007107 232 NNHFSGWIPRELIS----IRTFIYDGNSFDNGP 260 (618)
Q Consensus 232 ~N~l~g~ip~~~~~----l~~l~~~~N~~~~~~ 260 (618)
+|+|+|.+|..+.. +..+.+.+|+..|+.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~ 531 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGI 531 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCC
Confidence 88888888887754 346788899988863
No 457
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.28 E-value=2.8e-11 Score=112.68 Aligned_cols=138 Identities=16% Similarity=0.183 Sum_probs=97.0
Q ss_pred ceeccCccceEEEEEEcC-------CcEEEEEEcCccccc--------------------HHHHHHH----HHHHHHhhc
Q 007107 416 FLIGEGSLGRVYRAEFAN-------GKIMAVKKIDNAALS--------------------LQEEDNF----LEAVSNMSR 464 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~~-------g~~vavK~~~~~~~~--------------------~~~~~~~----~~e~~~l~~ 464 (618)
..||.|--+.||.|...+ +..+|+|..+..... ....+.+ .+|+..|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999997543 478999987422110 0011222 378888887
Q ss_pred CCC--CcccccceEEeeCCeEEEEEEecCCCChhh-hhhcccCCCCCCCHHHHHHHHHHHHHHHHHH-hhcCCCCceecC
Q 007107 465 LRH--PNIVTLAGYCAEHGQRLLVYEYVGNGNLHD-MLHFADDSSKNLTWNARVRVALGTARALEYL-HEVCLPSVVHRN 540 (618)
Q Consensus 465 l~h--~niv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~iiH~D 540 (618)
+.. -++.+++++ ...++||||+++..+.. .++ ...++..+...+..+++.+|..| |+. ++||+|
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk-----d~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGD 150 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK-----DAKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHAD 150 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh-----ccccCHHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 753 345555553 56789999998754422 222 12344556677889999999999 787 999999
Q ss_pred CCCCCeeecCCCCcEEeeccccccCC
Q 007107 541 FKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 541 lkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|++.|||+++ +.+.|+|||.+....
T Consensus 151 Ls~~NIL~~~-~~v~iIDF~qav~~~ 175 (197)
T cd05146 151 LSEYNMLWHD-GKVWFIDVSQSVEPT 175 (197)
T ss_pred CCHHHEEEEC-CcEEEEECCCceeCC
Confidence 9999999974 689999999886553
No 458
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.26 E-value=1.3e-12 Score=134.04 Aligned_cols=175 Identities=22% Similarity=0.234 Sum_probs=123.4
Q ss_pred CCEEEEEcCCCCCc------ccccccccCCCCCCEEeecCCCCCCCCCCCCC-----CCcceEecccccccc----cCCc
Q 007107 83 SAVVSIDISGLGLS------GTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP-----PNLTSLNLASNNFSG----NLPY 147 (618)
Q Consensus 83 ~~v~~l~l~~~~l~------~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~-----~~L~~L~L~~N~l~~----~~p~ 147 (618)
..++.|+++++.+. ..++..+..+++|+.|+|++|.+.+..+..+. ++|++|++++|++++ .+..
T Consensus 51 ~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~ 130 (319)
T cd00116 51 PSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAK 130 (319)
T ss_pred CCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHH
Confidence 34778888887776 23456677888999999999988765443332 349999999998883 3444
Q ss_pred ccccC-CCccEEEeecCCCCCc----hhhhhcCCCCCCeEEcccCcCCCC----CCCCcccCCCcCeeeeccccccccc-
Q 007107 148 SIASM-VSLSYLNVSRNSLTQS----IGDIFGNLAGLATLDLSFNNFSGD----LPNSFISLSNISSLYLQNNQVTGSL- 217 (618)
Q Consensus 148 ~~~~l-~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~- 217 (618)
.+..+ ++|+.|+|++|.+++. ++..+..+++|+.|+|++|.+++. ++..+..+++|++|+|++|.+++..
T Consensus 131 ~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 210 (319)
T cd00116 131 GLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGA 210 (319)
T ss_pred HHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHH
Confidence 56667 8899999999998853 344567778899999999988842 3334556678999999999887532
Q ss_pred ---c-cc-CCCCccEEEcccccccccCch----hh----hcccchhccCCcCC
Q 007107 218 ---N-VF-SGLPLTTLNVANNHFSGWIPR----EL----ISIRTFIYDGNSFD 257 (618)
Q Consensus 218 ---~-~~-~~~~L~~L~l~~N~l~g~ip~----~~----~~l~~l~~~~N~~~ 257 (618)
. .+ ...+|+.|++++|.+++.... .+ ..|+.|++.+|.+.
T Consensus 211 ~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~ 263 (319)
T cd00116 211 SALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDIT 263 (319)
T ss_pred HHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCC
Confidence 1 11 124589999999988863222 22 46777888887664
No 459
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.26 E-value=4.4e-11 Score=126.04 Aligned_cols=166 Identities=22% Similarity=0.261 Sum_probs=124.1
Q ss_pred EcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCCCChhhhhhcccCCCCCCC
Q 007107 431 FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLT 510 (618)
Q Consensus 431 ~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~ 510 (618)
..++..+.|...+.... .......+.++.++.++||||+++++.++..+..|+|+|-+. .|..++.. +.
T Consensus 34 k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~-------l~ 102 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE-------LG 102 (690)
T ss_pred eccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH-------hH
Confidence 34577777777665442 234556777889999999999999999999999999999986 46666642 22
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccccccccccccccCcccccc
Q 007107 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALS 590 (618)
Q Consensus 511 ~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 590 (618)
.....-.+.||+.||.|||..+ +++|++|.-+.|+|++.|+.||.+|.++........ ......--..|..|+.+..
T Consensus 103 ~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~ 179 (690)
T KOG1243|consen 103 KEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDP 179 (690)
T ss_pred HHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCc
Confidence 4556667889999999999775 899999999999999999999999988755432221 1111222234667775543
Q ss_pred CCccccchhhhHHHHHHHHHhC
Q 007107 591 GIYTVKSDVYSFGVVMLELLTG 612 (618)
Q Consensus 591 ~~~~~~~DvwSlG~il~elltg 612 (618)
.. -..|.|-||+++||++.|
T Consensus 180 s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 180 SE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred cc--cchhhhhHHHHHHHHhCc
Confidence 33 346999999999999998
No 460
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.26 E-value=2.6e-11 Score=144.21 Aligned_cols=35 Identities=29% Similarity=0.238 Sum_probs=18.0
Q ss_pred CCCeEEcccCcCCCCCCCCcccCCCcCeeeecccc
Q 007107 178 GLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQ 212 (618)
Q Consensus 178 ~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~ 212 (618)
+|+.|+|++|...+.+|.+++++++|+.|+|++|+
T Consensus 779 sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~ 813 (1153)
T PLN03210 779 SLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCI 813 (1153)
T ss_pred cchheeCCCCCCccccChhhhCCCCCCEEECCCCC
Confidence 34444444444444455555555555555555543
No 461
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.25 E-value=3.1e-13 Score=145.56 Aligned_cols=174 Identities=21% Similarity=0.266 Sum_probs=119.7
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEe
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 160 (618)
..++.+|++.|++++.. +.++.+.+|+.|+..+|+|+ .+|..+. ++|+.|++.+|.+. .+|..+..++.|+.|+|
T Consensus 241 ~nl~~~dis~n~l~~lp-~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL 317 (1081)
T KOG0618|consen 241 LNLQYLDISHNNLSNLP-EWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDL 317 (1081)
T ss_pred ccceeeecchhhhhcch-HHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeee
Confidence 35677888888888654 88899999999999999996 6676655 67777777777777 66777777888888888
Q ss_pred ecCCCCCchhhhhc-------------------------CCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccc
Q 007107 161 SRNSLTQSIGDIFG-------------------------NLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTG 215 (618)
Q Consensus 161 ~~N~l~~~~p~~~~-------------------------~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 215 (618)
..|+|....+..|. .++.|+.|+|.+|.|+...-..+.+..+|++|+|++|+|..
T Consensus 318 ~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~ 397 (1081)
T KOG0618|consen 318 QSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNS 397 (1081)
T ss_pred hhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeeccccccc
Confidence 88877744332221 12346667777777776555556677777777777777775
Q ss_pred cccccCC--CCccEEEcccccccccCchhh---hcccchhccCCcCCCCC
Q 007107 216 SLNVFSG--LPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNGP 260 (618)
Q Consensus 216 ~~~~~~~--~~L~~L~l~~N~l~g~ip~~~---~~l~~l~~~~N~~~~~~ 260 (618)
.+..... ..|+.|+||+|+|+ .+|+.+ ..|..|...+|.+.|-|
T Consensus 398 fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~~fP 446 (1081)
T KOG0618|consen 398 FPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLLSFP 446 (1081)
T ss_pred CCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCceeech
Confidence 4433222 23777777777777 666554 34456666677666654
No 462
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.20 E-value=8e-11 Score=140.05 Aligned_cols=166 Identities=17% Similarity=0.200 Sum_probs=115.2
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC-C---------------------CcceEecccccc
Q 007107 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP-P---------------------NLTSLNLASNNF 141 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~---------------------~L~~L~L~~N~l 141 (618)
+++.|+|++|..-..+|..+.+|++|+.|+|++|..-+.+|..+. + +|+.|+|++|.+
T Consensus 658 ~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i 737 (1153)
T PLN03210 658 NLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAI 737 (1153)
T ss_pred cccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcCCCCCCCEEeCCCCCCccccccccCCcCeeecCCCcc
Confidence 455666666555556677777777777777777544345554331 3 444555555554
Q ss_pred cccCCccc------------------------------ccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCC
Q 007107 142 SGNLPYSI------------------------------ASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSG 191 (618)
Q Consensus 142 ~~~~p~~~------------------------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 191 (618)
+ .+|..+ ...++|+.|+|++|...+.+|..++++++|+.|+|++|..-+
T Consensus 738 ~-~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~ 816 (1153)
T PLN03210 738 E-EFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLE 816 (1153)
T ss_pred c-cccccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcC
Confidence 4 334321 012467888888888888899999999999999999976555
Q ss_pred CCCCCcccCCCcCeeeeccccccccccccCCCCccEEEcccccccccCchhhh---cccchhccC
Q 007107 192 DLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPRELI---SIRTFIYDG 253 (618)
Q Consensus 192 ~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip~~~~---~l~~l~~~~ 253 (618)
.+|..+ ++++|+.|+|++|.....++.. ..+|+.|+|++|.++ .+|.++. +|+.|++.+
T Consensus 817 ~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~-~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~ 878 (1153)
T PLN03210 817 TLPTGI-NLESLESLDLSGCSRLRTFPDI-STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNG 878 (1153)
T ss_pred eeCCCC-CccccCEEECCCCCcccccccc-ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCC
Confidence 888876 7899999999998655444432 246999999999998 7887654 555666766
No 463
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.20 E-value=1.6e-11 Score=128.30 Aligned_cols=199 Identities=25% Similarity=0.289 Sum_probs=154.6
Q ss_pred hcCCcccceecc--CccceEEEEEE---cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCe
Q 007107 409 TNSFSQEFLIGE--GSLGRVYRAEF---ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQ 482 (618)
Q Consensus 409 ~~~~~~~~~Lg~--G~~g~Vy~~~~---~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 482 (618)
...+...+.+|. |.+|.||.+.. .++..+|+|+-+......+....-.+|+....++ .|+|.++.+..++..+.
T Consensus 113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~ 192 (524)
T KOG0601|consen 113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGI 192 (524)
T ss_pred hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCc
Confidence 345666778999 99999999976 3588899998665544334444445666666666 59999999999999999
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHH----HHHHHhhcCCCCceecCCCCCCeeecCC-CCcEEe
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR----ALEYLHEVCLPSVVHRNFKSANILLDDE-LNPHLS 557 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~----~L~~LH~~~~~~iiH~Dlkp~NiLl~~~-~~~kl~ 557 (618)
.++-+|++. .+|.++.+. ...-++....+....+..+ |+.++|+. +++|-|+||.||....+ ...++.
T Consensus 193 lfiqtE~~~-~sl~~~~~~---~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~ 265 (524)
T KOG0601|consen 193 LFIQTELCG-ESLQSYCHT---PCNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLT 265 (524)
T ss_pred ceeeecccc-chhHHhhhc---ccccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecC
Confidence 999999986 577776652 2233677788888888888 99999999 99999999999999988 889999
Q ss_pred eccccccCCCCCcccc----ccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCC
Q 007107 558 DCGLAALTPNTERQVS----TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKP 615 (618)
Q Consensus 558 Dfgl~~~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~P 615 (618)
|||+...+.+..-... ....|...|++||... .-++..+|+|++|.++.+..++-.+
T Consensus 266 df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~ 326 (524)
T KOG0601|consen 266 DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHL 326 (524)
T ss_pred CcceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhccc
Confidence 9999987755432211 1225777899999765 4568899999999999998876544
No 464
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.19 E-value=2.4e-10 Score=102.49 Aligned_cols=136 Identities=22% Similarity=0.322 Sum_probs=102.0
Q ss_pred eeccCccceEEEEEEcCCcEEEEEE-cCcccccHH-----HHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEec
Q 007107 417 LIGEGSLGRVYRAEFANGKIMAVKK-IDNAALSLQ-----EEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYV 490 (618)
Q Consensus 417 ~Lg~G~~g~Vy~~~~~~g~~vavK~-~~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 490 (618)
.+++|+-+.+|.+.+.+.. +++|. +++....++ ...+-.+|+.++.+++--.|.-..=+..+.+...++|||+
T Consensus 3 ~i~~GAEa~i~~~~~~g~~-av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFLGLP-AVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeeccCcc-eEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 5789999999999876444 44443 333322222 1234567888888887666666666777888899999999
Q ss_pred CCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
++-.|.+.+... ...++..+-+-+.-||.. +|+|+||.++||++..+. +.++|||++......
T Consensus 82 ~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~s~~~ 144 (204)
T COG3642 82 EGELLKDALEEA-----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEFSDEV 144 (204)
T ss_pred CChhHHHHHHhc-----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccccccH
Confidence 999999888622 234666777888999999 999999999999998775 999999999765433
No 465
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.17 E-value=3.2e-11 Score=116.10 Aligned_cols=154 Identities=25% Similarity=0.397 Sum_probs=118.4
Q ss_pred HHHhhcCCCCcccccceEEeeCC-----eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 007107 459 VSNMSRLRHPNIVTLAGYCAEHG-----QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL 533 (618)
Q Consensus 459 ~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~ 533 (618)
+..+-.+.|.|||+++.|+.+.. +..++.|||..|++.++++..+.....+......+++.||..||.|||+. .
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~ 196 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-D 196 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-C
Confidence 33444557999999999986643 56899999999999999998777777888889999999999999999995 6
Q ss_pred CCceecCCCCCCeeecCCCCcEEeeccccccCCCCC--cc-ccccccccccccCccccccCCccccchhhhHHHHHHHHH
Q 007107 534 PSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE--RQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELL 610 (618)
Q Consensus 534 ~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~--~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ell 610 (618)
|.|+|+++.-+-|++..+|-+||.----......-. .. -.....+-++|.|||+=.....+..+|||+||+...||.
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 799999999999999999888874211110000000 00 001124568899999877777788999999999999997
Q ss_pred hCC
Q 007107 611 TGR 613 (618)
Q Consensus 611 tg~ 613 (618)
.+.
T Consensus 277 ilE 279 (458)
T KOG1266|consen 277 ILE 279 (458)
T ss_pred Hhe
Confidence 664
No 466
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.16 E-value=1.1e-12 Score=134.29 Aligned_cols=152 Identities=26% Similarity=0.372 Sum_probs=97.1
Q ss_pred EEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC-CCcceEecccccccccCCcccccCCCccEEEeecC
Q 007107 85 VVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP-PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRN 163 (618)
Q Consensus 85 v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 163 (618)
|..+.|..|.+. .+|..+.+|..|++|||+.|+++ .+|..++ --|+.|-+++|+++ .+|..++.+..|..||.+.|
T Consensus 100 Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lpLkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~n 176 (722)
T KOG0532|consen 100 LESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLPLKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKN 176 (722)
T ss_pred HHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCcceeEEEecCccc-cCCcccccchhHHHhhhhhh
Confidence 444556666664 56667777777777777777776 5555555 45777777777777 66667776677777777777
Q ss_pred CCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCC-ccEEEcccccccccCchh
Q 007107 164 SLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP-LTTLNVANNHFSGWIPRE 242 (618)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~L~l~~N~l~g~ip~~ 242 (618)
.+. .+|..++++.+|+.|.+..|++. .+|..++.| .|..||+|.|+++..+-.+..+. |++|-|.+|.|+ .-|..
T Consensus 177 ei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis~iPv~fr~m~~Lq~l~LenNPLq-SPPAq 252 (722)
T KOG0532|consen 177 EIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKISYLPVDFRKMRHLQVLQLENNPLQ-SPPAQ 252 (722)
T ss_pred hhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCceeecchhhhhhhhheeeeeccCCCC-CChHH
Confidence 776 45566666666666666666666 566666644 46666666666665444444443 666666666666 33443
Q ss_pred h
Q 007107 243 L 243 (618)
Q Consensus 243 ~ 243 (618)
+
T Consensus 253 I 253 (722)
T KOG0532|consen 253 I 253 (722)
T ss_pred H
Confidence 3
No 467
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.14 E-value=3.9e-11 Score=109.51 Aligned_cols=111 Identities=25% Similarity=0.301 Sum_probs=30.8
Q ss_pred ccCCCCCCEEeecCCCCCCCCCCCC-CCCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCe
Q 007107 103 LSDLLSLRKFDLSGNSIHDTIPYQL-PPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLAT 181 (618)
Q Consensus 103 l~~l~~L~~L~L~~N~l~~~~p~~~-~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 181 (618)
+.+..+++.|+|++|.|+.+..... ..+|+.|||++|.|+.. +.+..+++|+.|+|++|+|+...+.....+++|+.
T Consensus 15 ~~n~~~~~~L~L~~n~I~~Ie~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~ 92 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTIENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQE 92 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT--E
T ss_pred cccccccccccccccccccccchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCccccchHHhCCcCCE
Confidence 3444566777777777774322221 25677777777777743 34666777777777777777543322235677777
Q ss_pred EEcccCcCCCCC-CCCcccCCCcCeeeeccccccc
Q 007107 182 LDLSFNNFSGDL-PNSFISLSNISSLYLQNNQVTG 215 (618)
Q Consensus 182 L~l~~N~l~g~~-p~~~~~l~~L~~L~l~~N~l~~ 215 (618)
|+|++|+|...- -..+..+++|++|+|.+|.++.
T Consensus 93 L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 93 LYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp EE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGG
T ss_pred EECcCCcCCChHHhHHHHcCCCcceeeccCCcccc
Confidence 777777776311 1234455666666666666553
No 468
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.14 E-value=4e-10 Score=109.12 Aligned_cols=144 Identities=22% Similarity=0.286 Sum_probs=108.2
Q ss_pred ceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCC--cccccceEEeeC---CeEEEEEEec
Q 007107 416 FLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHP--NIVTLAGYCAEH---GQRLLVYEYV 490 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~~~---~~~~lv~e~~ 490 (618)
+.|+.|..+.||++...+|+.+++|........ .....+..|++.++.+.+. ++.+++.+.... +..++||||+
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 468999999999998877789999997654321 1345678888888888653 456677766553 3668999999
Q ss_pred CCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC--------------------------------------
Q 007107 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC-------------------------------------- 532 (618)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------------------------------------- 532 (618)
++.++.+.+. ...++......++.+++++|.+||+..
T Consensus 83 ~G~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 83 DGRVLRDRLL-----RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred CCEecCCCCC-----CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 9988876552 134667777778888888888888531
Q ss_pred ---------------CCCceecCCCCCCeeecC--CCCcEEeeccccccC
Q 007107 533 ---------------LPSVVHRNFKSANILLDD--ELNPHLSDCGLAALT 565 (618)
Q Consensus 533 ---------------~~~iiH~Dlkp~NiLl~~--~~~~kl~Dfgl~~~~ 565 (618)
...++|+|+.|.||++++ ++.+.|+||+.+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g 207 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLG 207 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccC
Confidence 135799999999999998 667899999987543
No 469
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.13 E-value=3.2e-11 Score=110.06 Aligned_cols=121 Identities=23% Similarity=0.254 Sum_probs=53.3
Q ss_pred CEEEEEcCCCCCccccccccc-CCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCccc-ccCCCccEEEee
Q 007107 84 AVVSIDISGLGLSGTMGYLLS-DLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSI-ASMVSLSYLNVS 161 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l~-~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~ 161 (618)
+++.|+|.+|+|+.+ +.++ .+++|+.|+|++|.|+........++|+.|+|++|+|+. +.+.+ ..+++|+.|+|+
T Consensus 20 ~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l~~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~~L~L~ 96 (175)
T PF14580_consen 20 KLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKLEGLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQELYLS 96 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S--TT----TT--EEE--SS---S--CHHHHHH-TT--EEE-T
T ss_pred ccccccccccccccc--cchhhhhcCCCEEECCCCCCccccCccChhhhhhcccCCCCCCc-cccchHHhCCcCCEEECc
Confidence 578899999999754 4566 689999999999999976655556999999999999994 44445 479999999999
Q ss_pred cCCCCCch-hhhhcCCCCCCeEEcccCcCCCCCCC----CcccCCCcCeeee
Q 007107 162 RNSLTQSI-GDIFGNLAGLATLDLSFNNFSGDLPN----SFISLSNISSLYL 208 (618)
Q Consensus 162 ~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~g~~p~----~~~~l~~L~~L~l 208 (618)
+|+|...- -..+..+++|+.|+|.+|.++. .+. .+..+++|+.||-
T Consensus 97 ~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~-~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 97 NNKISDLNELEPLSSLPKLRVLSLEGNPVCE-KKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp TS---SCCCCGGGGG-TT--EEE-TT-GGGG-STTHHHHHHHH-TT-SEETT
T ss_pred CCcCCChHHhHHHHcCCCcceeeccCCcccc-hhhHHHHHHHHcChhheeCC
Confidence 99998532 2567789999999999999983 343 2456889998873
No 470
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.10 E-value=1.2e-09 Score=97.53 Aligned_cols=147 Identities=18% Similarity=0.256 Sum_probs=106.2
Q ss_pred ccceeccCccceEEEEEEcCCcEEEEEE-cCcccccH-----HHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 414 QEFLIGEGSLGRVYRAEFANGKIMAVKK-IDNAALSL-----QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 414 ~~~~Lg~G~~g~Vy~~~~~~g~~vavK~-~~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
....+.+|+-+.|+++.+. |+...||. +.+....+ -..++...|++.+.++.--.|.-..-++.+.....++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4567899999999999886 66655654 32222111 23456678899888887666665555677777888999
Q ss_pred EecCC-CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCC---cEEeeccccc
Q 007107 488 EYVGN-GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN---PHLSDCGLAA 563 (618)
Q Consensus 488 e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~---~kl~Dfgl~~ 563 (618)
||+++ .++.+++..... ..........++..|-+.+.-||.. +|||+||.++||++..++. +.++|||++.
T Consensus 90 E~~~g~~~vk~~i~~~~~--~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTME--DESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred EeccchhHHHHHHHHHcc--CcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchh
Confidence 99976 478888864321 1222222367888899999999999 9999999999999975543 4799999986
Q ss_pred cCC
Q 007107 564 LTP 566 (618)
Q Consensus 564 ~~~ 566 (618)
...
T Consensus 165 ~s~ 167 (229)
T KOG3087|consen 165 VSR 167 (229)
T ss_pred ccc
Confidence 543
No 471
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.10 E-value=4.3e-11 Score=125.05 Aligned_cols=198 Identities=20% Similarity=0.195 Sum_probs=152.0
Q ss_pred hhhhcCCcccceeccCccceEEEEEEc--CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCe
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEFA--NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQ 482 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~~--~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 482 (618)
.....+|.....||.|.|+.|++...+ ++..|++|.+.+..........-..|+.+...+ .|.+++.++..+.....
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~ 340 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ 340 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc
Confidence 445567888899999999999998543 588999999887665544444445566665555 59999999888888888
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC-CCcEEeeccc
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE-LNPHLSDCGL 561 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~-~~~kl~Dfgl 561 (618)
.++-.||+++++...... ....+++..++++..|++.++.++|+. .++|+|+||+||++..+ +..++.|||.
T Consensus 341 ~~ip~e~~~~~s~~l~~~----~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~ 413 (524)
T KOG0601|consen 341 GYIPLEFCEGGSSSLRSV----TSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGC 413 (524)
T ss_pred ccCchhhhcCcchhhhhH----HHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcccccc
Confidence 889999999998876552 345678888899999999999999998 99999999999999876 7889999998
Q ss_pred cccCCCCCcccccccccccccc--CccccccCCccccchhhhHHHHHHHHHhCCC
Q 007107 562 AALTPNTERQVSTQMVGAFGYS--APEFALSGIYTVKSDVYSFGVVMLELLTGRK 614 (618)
Q Consensus 562 ~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DvwSlG~il~elltg~~ 614 (618)
+..+.-.. ....+.-+++ +++......+..+.|++|||.-+.|..+|..
T Consensus 414 ~t~~~~~~----~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ 464 (524)
T KOG0601|consen 414 WTRLAFSS----GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSP 464 (524)
T ss_pred ccccceec----ccccccccccccchhhccccccccccccccccccccccccCcc
Confidence 86432111 1112223344 5555556778899999999999999888753
No 472
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.06 E-value=1e-10 Score=123.91 Aligned_cols=168 Identities=31% Similarity=0.461 Sum_probs=70.4
Q ss_pred EEEEEcCCCCCcccccccccCCC-CCCEEeecCCCCCCC-CCCCCCCCcceEecccccccccCCcccccCCCccEEEeec
Q 007107 85 VVSIDISGLGLSGTMGYLLSDLL-SLRKFDLSGNSIHDT-IPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (618)
Q Consensus 85 v~~l~l~~~~l~~~~~~~l~~l~-~L~~L~L~~N~l~~~-~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (618)
++.|++.+|+++. +++....+. +|+.|++++|++... .+....++|+.|++++|+++ .+|...+.+++|+.|++++
T Consensus 118 l~~L~l~~n~i~~-i~~~~~~~~~nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~ 195 (394)
T COG4886 118 LTSLDLDNNNITD-IPPLIGLLKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSG 195 (394)
T ss_pred eeEEecCCccccc-CccccccchhhcccccccccchhhhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccC
Confidence 4444444444432 233333332 444444444444421 12223344444444444444 3333333444444444444
Q ss_pred CCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCC-CCccEEEcccccccccCch
Q 007107 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSG-LPLTTLNVANNHFSGWIPR 241 (618)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~l~~N~l~g~ip~ 241 (618)
|+++ .+|.....+..|+.|.+++|.+. .++..+..+.++..|.+++|++...+..... ..++.|++++|.++ .++.
T Consensus 196 N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~l~~l~~L~~s~n~i~-~i~~ 272 (394)
T COG4886 196 NKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDLPESIGNLSNLETLDLSNNQIS-SISS 272 (394)
T ss_pred Cccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeeeccchhccccccceecccccccc-cccc
Confidence 4444 22332222333444444444322 2333344444444444444444432222222 22566666666665 3332
Q ss_pred --hhhcccchhccCCcCC
Q 007107 242 --ELISIRTFIYDGNSFD 257 (618)
Q Consensus 242 --~~~~l~~l~~~~N~~~ 257 (618)
.+.+++.|++++|.+.
T Consensus 273 ~~~~~~l~~L~~s~n~~~ 290 (394)
T COG4886 273 LGSLTNLRELDLSGNSLS 290 (394)
T ss_pred ccccCccCEEeccCcccc
Confidence 3344455555555544
No 473
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=99.05 E-value=1.5e-11 Score=129.24 Aligned_cols=127 Identities=25% Similarity=0.329 Sum_probs=107.3
Q ss_pred CCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCC-cccCCCcCeee
Q 007107 129 PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNS-FISLSNISSLY 207 (618)
Q Consensus 129 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~L~~L~ 207 (618)
..|.+.+.++|+|. .+..++.-++.|+.|||++|+++... .+..++.|++|||++|.|. .+|.. ...+ .|+.|.
T Consensus 164 n~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~ 238 (1096)
T KOG1859|consen 164 NKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLN 238 (1096)
T ss_pred hhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhh-hheeee
Confidence 57889999999999 77788999999999999999999664 7888999999999999999 67753 2234 499999
Q ss_pred eccccccccccccCCCCccEEEcccccccc---cCc-hhhhcccchhccCCcCCCCC
Q 007107 208 LQNNQVTGSLNVFSGLPLTTLNVANNHFSG---WIP-RELISIRTFIYDGNSFDNGP 260 (618)
Q Consensus 208 l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g---~ip-~~~~~l~~l~~~~N~~~~~~ 260 (618)
|++|-++.....-...+|..|||+.|-|++ ..| ..+..|..|++.|||++|.+
T Consensus 239 lrnN~l~tL~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p 295 (1096)
T KOG1859|consen 239 LRNNALTTLRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAP 295 (1096)
T ss_pred ecccHHHhhhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCH
Confidence 999999976665555679999999999987 223 45688999999999999975
No 474
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.04 E-value=2e-11 Score=115.80 Aligned_cols=127 Identities=24% Similarity=0.302 Sum_probs=84.3
Q ss_pred CCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeee
Q 007107 129 PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYL 208 (618)
Q Consensus 129 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 208 (618)
+-|+.||||+|.|+ .+.++..-+++++.|++|+|+|+.+ .+ +..+++|+.||||+|.++ .+-.+-..+-|++.|.|
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v-~n-La~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV-QN-LAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKL 359 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEeccccceeee-hh-hhhcccceEeecccchhH-hhhhhHhhhcCEeeeeh
Confidence 56777888888777 6667777778888888888887733 22 667778888888888877 55555567777888888
Q ss_pred ccccccccccccCCCCccEEEcccccccccCc-h---hhhcccchhccCCcCCCC
Q 007107 209 QNNQVTGSLNVFSGLPLTTLNVANNHFSGWIP-R---ELISIRTFIYDGNSFDNG 259 (618)
Q Consensus 209 ~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip-~---~~~~l~~l~~~~N~~~~~ 259 (618)
++|.|...-..-..-+|..||+++|+|...-- . .++.|..+.+.+||+..-
T Consensus 360 a~N~iE~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 360 AQNKIETLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred hhhhHhhhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 88877643222222347778888887763111 1 233445667777777653
No 475
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.02 E-value=5.5e-11 Score=118.59 Aligned_cols=175 Identities=22% Similarity=0.235 Sum_probs=129.2
Q ss_pred CCEEEEEcCCCCCcc--cccccccCCCCCCEEeecCCCCCCCCCC---CCCCCcceEecccccccc-cCCcccccCCCcc
Q 007107 83 SAVVSIDISGLGLSG--TMGYLLSDLLSLRKFDLSGNSIHDTIPY---QLPPNLTSLNLASNNFSG-NLPYSIASMVSLS 156 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~--~~~~~l~~l~~L~~L~L~~N~l~~~~p~---~~~~~L~~L~L~~N~l~~-~~p~~~~~l~~L~ 156 (618)
.+|+.|||++|-+.. ++......|++|+.|+|+.|++.-.... ...+.|+.|.|+.+.|+- .+-..+..+++|+
T Consensus 146 ~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~ 225 (505)
T KOG3207|consen 146 PNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLE 225 (505)
T ss_pred CcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHH
Confidence 579999999998764 3345567899999999999998743332 233899999999999983 2334456889999
Q ss_pred EEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCC--CCcccCCCcCeeeecccccccc-cccc-------CCCCcc
Q 007107 157 YLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLP--NSFISLSNISSLYLQNNQVTGS-LNVF-------SGLPLT 226 (618)
Q Consensus 157 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p--~~~~~l~~L~~L~l~~N~l~~~-~~~~-------~~~~L~ 226 (618)
.|+|..|...+.-......++.|+.|||++|++- ..+ ...+.++.|..|+++.+.|+.. .+.. ...+|+
T Consensus 226 ~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~ 304 (505)
T KOG3207|consen 226 VLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLE 304 (505)
T ss_pred HhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccccccchhhhhccccCcchhcCCCccchhhhcccccce
Confidence 9999999744444455666889999999999998 455 4567889999999999998862 2221 123599
Q ss_pred EEEcccccccccCc-----hhhhcccchhccCCcCCCC
Q 007107 227 TLNVANNHFSGWIP-----RELISIRTFIYDGNSFDNG 259 (618)
Q Consensus 227 ~L~l~~N~l~g~ip-----~~~~~l~~l~~~~N~~~~~ 259 (618)
.|+++.|++.. .+ ..+.+++.|.+.+|.++..
T Consensus 305 ~L~i~~N~I~~-w~sl~~l~~l~nlk~l~~~~n~ln~e 341 (505)
T KOG3207|consen 305 YLNISENNIRD-WRSLNHLRTLENLKHLRITLNYLNKE 341 (505)
T ss_pred eeecccCcccc-ccccchhhccchhhhhhccccccccc
Confidence 99999999963 22 2345666677777776653
No 476
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.02 E-value=1.3e-10 Score=122.93 Aligned_cols=155 Identities=32% Similarity=0.426 Sum_probs=133.3
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCC--CCCCcceEecccccccccCCcccccCCCccEEEee
Q 007107 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQ--LPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~--~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (618)
+++.|++++|.+.. +|..+..+++|+.|++++|+++ .+|.. ..++|+.|++++|+++ .+|..+..+..|++|+++
T Consensus 141 nL~~L~l~~N~i~~-l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~ 217 (394)
T COG4886 141 NLKELDLSDNKIES-LPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLS 217 (394)
T ss_pred hcccccccccchhh-hhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhc
Confidence 79999999999974 5578999999999999999999 55555 4599999999999999 788877788889999999
Q ss_pred cCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCCccEEEcccccccccCch
Q 007107 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPR 241 (618)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip~ 241 (618)
+|++. .++..+.++.++..|.+.+|++. .++..++.+++|+.|++++|.++.........+++.|++++|.++...|.
T Consensus 218 ~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~~i~~~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 218 NNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQISSISSLGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred CCcce-ecchhhhhcccccccccCCceee-eccchhccccccceeccccccccccccccccCccCEEeccCccccccchh
Confidence 99755 46677889999999999999998 66888999999999999999999866633445699999999999977765
Q ss_pred hh
Q 007107 242 EL 243 (618)
Q Consensus 242 ~~ 243 (618)
..
T Consensus 296 ~~ 297 (394)
T COG4886 296 IA 297 (394)
T ss_pred hh
Confidence 44
No 477
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.02 E-value=6.1e-11 Score=130.10 Aligned_cols=204 Identities=24% Similarity=0.268 Sum_probs=140.9
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
..+.+.+.+-+-+|.++.++.+.-. .|...++|....... .....+..+.+-...-...||-++...--+......++
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 3445666667888999999877433 244444444432211 11111112222222222234555554444445667899
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
|++|+.+++|...++. .+..+..........+..+.+|||.. .+.|||++|.|.++..+++.+++|||.....
T Consensus 882 ~~~~~~~~~~~Skl~~----~~~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v 954 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHN----SGCLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKV 954 (1205)
T ss_pred hhHHhccCCchhhhhc----CCCcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccccc
Confidence 9999999999999973 33455555666777888999999998 7899999999999999999999999843211
Q ss_pred C-------C-----------------------CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCC
Q 007107 566 P-------N-----------------------TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKP 615 (618)
Q Consensus 566 ~-------~-----------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~P 615 (618)
. . ++........||+.|.+||...+......+|+|++|++++|.++|..|
T Consensus 955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen 955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCC
Confidence 0 0 000112335799999999999999999999999999999999999999
Q ss_pred CCC
Q 007107 616 LDR 618 (618)
Q Consensus 616 f~~ 618 (618)
|+.
T Consensus 1035 ~na 1037 (1205)
T KOG0606|consen 1035 FNA 1037 (1205)
T ss_pred CCC
Confidence 974
No 478
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.00 E-value=5.8e-11 Score=112.71 Aligned_cols=105 Identities=22% Similarity=0.235 Sum_probs=46.0
Q ss_pred ccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeecccccccccccc-CCCCccEE
Q 007107 150 ASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVF-SGLPLTTL 228 (618)
Q Consensus 150 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L 228 (618)
.....|+.||||+|.|+ .+.++..-+|.++.|++|+|.|. .+- .+..+++|+.||||+|.++.....- ..-++++|
T Consensus 281 dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 281 DTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLAECVGWHLKLGNIKTL 357 (490)
T ss_pred chHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhHhhhhhHhhhcCEeee
Confidence 33444555555555554 33344444455555555555554 222 2444555555555555554322211 11234555
Q ss_pred EcccccccccCc-hhhhcccchhccCCcCC
Q 007107 229 NVANNHFSGWIP-RELISIRTFIYDGNSFD 257 (618)
Q Consensus 229 ~l~~N~l~g~ip-~~~~~l~~l~~~~N~~~ 257 (618)
.|+.|.|....- ..+.+|.+|++.+|.+.
T Consensus 358 ~La~N~iE~LSGL~KLYSLvnLDl~~N~Ie 387 (490)
T KOG1259|consen 358 KLAQNKIETLSGLRKLYSLVNLDLSSNQIE 387 (490)
T ss_pred ehhhhhHhhhhhhHhhhhheeccccccchh
Confidence 555554432111 22334444455555443
No 479
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.98 E-value=3.9e-10 Score=84.63 Aligned_cols=60 Identities=42% Similarity=0.540 Sum_probs=37.1
Q ss_pred CcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcC
Q 007107 130 NLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNF 189 (618)
Q Consensus 130 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 189 (618)
+|+.|+|++|+|+...+..|.++++|++|+|++|+++...|..|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 456666666666644445666666666666666666655556666666666666666654
No 480
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.96 E-value=4.3e-09 Score=97.78 Aligned_cols=128 Identities=23% Similarity=0.292 Sum_probs=83.1
Q ss_pred eEEEEEEcCCcEEEEEEcCcccc------------------------cHHHHHHHHHHHHHhhcCCCC--cccccceEEe
Q 007107 425 RVYRAEFANGKIMAVKKIDNAAL------------------------SLQEEDNFLEAVSNMSRLRHP--NIVTLAGYCA 478 (618)
Q Consensus 425 ~Vy~~~~~~g~~vavK~~~~~~~------------------------~~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~ 478 (618)
.||.|...+|..+|+|..+.... .........+|++.|.++... ++.+++++
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 48999999999999998743211 111234557899999998766 45555544
Q ss_pred eCCeEEEEEEecC--CCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHH-HhhcCCCCceecCCCCCCeeecCCCCcE
Q 007107 479 EHGQRLLVYEYVG--NGNLHDMLHFADDSSKNLTWNARVRVALGTARALEY-LHEVCLPSVVHRNFKSANILLDDELNPH 555 (618)
Q Consensus 479 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~-LH~~~~~~iiH~Dlkp~NiLl~~~~~~k 555 (618)
...++||||++ +..+..+... .++......++.+++..+.. +|+. ||+|+||.+.||+++++ .+.
T Consensus 79 --~~~~ivME~I~~~G~~~~~l~~~------~~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 79 --NRNVIVMEYIGEDGVPLPRLKDV------DLSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp --ETTEEEEE--EETTEEGGCHHHC------GGGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEE
T ss_pred --eCCEEEEEecCCCccchhhHHhc------cccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEE
Confidence 24579999998 6555544331 11133445677778775555 5677 99999999999999988 999
Q ss_pred EeeccccccCC
Q 007107 556 LSDCGLAALTP 566 (618)
Q Consensus 556 l~Dfgl~~~~~ 566 (618)
|+|||.+....
T Consensus 147 iIDf~qav~~~ 157 (188)
T PF01163_consen 147 IIDFGQAVDSS 157 (188)
T ss_dssp E--GTTEEETT
T ss_pred EEecCcceecC
Confidence 99999886543
No 481
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.94 E-value=1.6e-08 Score=99.72 Aligned_cols=142 Identities=15% Similarity=0.102 Sum_probs=99.2
Q ss_pred eeccCccceEEEEEEcCCcEEEEEEcCcccccHH---------HHHHHHHHHHHhhcCCCCcc--cccceEEee-----C
Q 007107 417 LIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQ---------EEDNFLEAVSNMSRLRHPNI--VTLAGYCAE-----H 480 (618)
Q Consensus 417 ~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~---------~~~~~~~e~~~l~~l~h~ni--v~l~~~~~~-----~ 480 (618)
.+-+.....|++..+ +|+.|.||+......... ....+.+|...+.++...+| .+++++.+. .
T Consensus 29 ~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~ 107 (268)
T PRK15123 29 VFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT 107 (268)
T ss_pred EEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence 444455555777766 578899997753331110 01136677777776643333 334445433 2
Q ss_pred CeEEEEEEecCCC-ChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC-------CC
Q 007107 481 GQRLLVYEYVGNG-NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-------EL 552 (618)
Q Consensus 481 ~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~-------~~ 552 (618)
...++|+|++++. +|.+++.... ....+...+..++.+++..+.-||.. ||+|+|++++|||++. +.
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~--~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~ 182 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWA--TNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDL 182 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCc
Confidence 3578999999886 8988875221 23455667788999999999999999 9999999999999975 46
Q ss_pred CcEEeecccccc
Q 007107 553 NPHLSDCGLAAL 564 (618)
Q Consensus 553 ~~kl~Dfgl~~~ 564 (618)
.+.++||+.+..
T Consensus 183 ~~~LIDl~r~~~ 194 (268)
T PRK15123 183 KLSVIDLHRAQI 194 (268)
T ss_pred eEEEEECCcccc
Confidence 789999998854
No 482
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.93 E-value=5.8e-10 Score=83.68 Aligned_cols=61 Identities=43% Similarity=0.557 Sum_probs=56.3
Q ss_pred CCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccc
Q 007107 153 VSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQV 213 (618)
Q Consensus 153 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l 213 (618)
++|++|+|++|+|+...+..|.++++|++|++++|+|+...|..|..+++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5799999999999988788999999999999999999977778999999999999999986
No 483
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=98.83 E-value=6.7e-10 Score=109.54 Aligned_cols=141 Identities=26% Similarity=0.334 Sum_probs=112.0
Q ss_pred CCCCCCCCCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEccc-CcCCCCCCCCcccC
Q 007107 122 TIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSF-NNFSGDLPNSFISL 200 (618)
Q Consensus 122 ~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~g~~p~~~~~l 200 (618)
.+|..+++.-+.|+|..|+|+...|..|+.+++|+.||||+|+|+-+-|++|.++++|..|-+-+ |+|+..-...|++|
T Consensus 60 eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL 139 (498)
T KOG4237|consen 60 EVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGL 139 (498)
T ss_pred cCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhH
Confidence 67888888889999999999988888899999999999999999999999999999888776554 99994444568899
Q ss_pred CCcCeeeeccccccccccc-cCC-CCccEEEcccccccccCch----hhhcccchhccCCcCCCCCCCC
Q 007107 201 SNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFSGWIPR----ELISIRTFIYDGNSFDNGPAPP 263 (618)
Q Consensus 201 ~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~l~~N~l~g~ip~----~~~~l~~l~~~~N~~~~~~~~~ 263 (618)
..|+.|.+.-|++.-.... +.. .++..|.|-+|.+. .|+. .+..++.+.+.-|++-|....+
T Consensus 140 ~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCnL~ 207 (498)
T KOG4237|consen 140 SSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCNLP 207 (498)
T ss_pred HHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccccccc
Confidence 9999999999998865532 322 34788888899887 5554 3456677889999988876543
No 484
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.78 E-value=1.2e-09 Score=115.92 Aligned_cols=170 Identities=24% Similarity=0.240 Sum_probs=90.9
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeec
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (618)
..+..|++.+|+|.+... .+..+++|++|+|++|.|+...+....+.|+.|++++|.|+.. ..+..+++|+.+++++
T Consensus 95 ~~l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I~~i~~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~ 171 (414)
T KOG0531|consen 95 KSLEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKITKLEGLSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSY 171 (414)
T ss_pred cceeeeeccccchhhccc-chhhhhcchheeccccccccccchhhccchhhheeccCcchhc--cCCccchhhhcccCCc
Confidence 345666666666654321 1555666666666666666555555555566666666666633 3444566666666666
Q ss_pred CCCCCchh-hhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCC--ccEEEccccccccc-
Q 007107 163 NSLTQSIG-DIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP--LTTLNVANNHFSGW- 238 (618)
Q Consensus 163 N~l~~~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~--L~~L~l~~N~l~g~- 238 (618)
|+++...+ . ...+.+|+.+++.+|.+. ....+..+..+..+++..|.++..-+...... |+.+++++|+++-.
T Consensus 172 n~i~~ie~~~-~~~~~~l~~l~l~~n~i~--~i~~~~~~~~l~~~~l~~n~i~~~~~l~~~~~~~L~~l~l~~n~i~~~~ 248 (414)
T KOG0531|consen 172 NRIVDIENDE-LSELISLEELDLGGNSIR--EIEGLDLLKKLVLLSLLDNKISKLEGLNELVMLHLRELYLSGNRISRSP 248 (414)
T ss_pred chhhhhhhhh-hhhccchHHHhccCCchh--cccchHHHHHHHHhhcccccceeccCcccchhHHHHHHhcccCcccccc
Confidence 66664433 2 345566666666666665 22233334444444555555554322222222 56666666666621
Q ss_pred -CchhhhcccchhccCCcCCC
Q 007107 239 -IPRELISIRTFIYDGNSFDN 258 (618)
Q Consensus 239 -ip~~~~~l~~l~~~~N~~~~ 258 (618)
....+..+..+++..|....
T Consensus 249 ~~~~~~~~l~~l~~~~n~~~~ 269 (414)
T KOG0531|consen 249 EGLENLKNLPVLDLSSNRISN 269 (414)
T ss_pred ccccccccccccchhhccccc
Confidence 22344455555555555443
No 485
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.75 E-value=7.5e-08 Score=98.86 Aligned_cols=169 Identities=18% Similarity=0.258 Sum_probs=125.6
Q ss_pred ccceEEEEEE-cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee----CCeEEEEEEecCC-CCh
Q 007107 422 SLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE----HGQRLLVYEYVGN-GNL 495 (618)
Q Consensus 422 ~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~~~-gsL 495 (618)
...+.|++.. .||..|++|+++.... +.......-+++++++.|+|||++.+++.. +..+++|++|.++ ++|
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~--~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRD--QSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccc--cCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 3457899954 4799999999943321 122223355788999999999999998863 3478999999986 467
Q ss_pred hhhhhcc-----------cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 496 HDMLHFA-----------DDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 496 ~~~l~~~-----------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
.++.-.. -..+...++..+|.++.|+..||.++|+. |+.-+-|.+++|+++.+.+++|+..|....
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dv 442 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDV 442 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceee
Confidence 6654211 11234578899999999999999999999 899999999999999988999999988876
Q ss_pred CCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGR 613 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~ 613 (618)
...+... -+.+ -.+-|.=.||.++..|.||.
T Consensus 443 l~~d~~~---------------~le~---~Qq~D~~~lG~ll~aLAt~~ 473 (655)
T KOG3741|consen 443 LQEDPTE---------------PLES---QQQNDLRDLGLLLLALATGT 473 (655)
T ss_pred ecCCCCc---------------chhH---HhhhhHHHHHHHHHHHhhcc
Confidence 6543311 1111 13568889999999999984
No 486
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.68 E-value=2.2e-09 Score=114.03 Aligned_cols=170 Identities=24% Similarity=0.279 Sum_probs=128.3
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCC-CCCCCCcceEecccccccccCCcccccCCCccEEEeec
Q 007107 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIP-YQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (618)
.+..+++..|.+.. +-..+..+++|..|+|.+|+|.+... ....++|++|+|++|+|+.. ..+..++.|+.|++++
T Consensus 73 ~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L~l~~ 149 (414)
T KOG0531|consen 73 SLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKELNLSG 149 (414)
T ss_pred hHHhhccchhhhhh-hhcccccccceeeeeccccchhhcccchhhhhcchheeccccccccc--cchhhccchhhheecc
Confidence 34555677777654 34558889999999999999997766 56669999999999999966 4577788899999999
Q ss_pred CCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCC-cccCCCcCeeeeccccccccccccCCCCccEEEcccccccccCch
Q 007107 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNS-FISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPR 241 (618)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip~ 241 (618)
|.|+.. ..+..+++|+.+++++|++. .+... ...+.+|+.+++.+|.+...-..-....+..+++..|.++-.-+.
T Consensus 150 N~i~~~--~~~~~l~~L~~l~l~~n~i~-~ie~~~~~~~~~l~~l~l~~n~i~~i~~~~~~~~l~~~~l~~n~i~~~~~l 226 (414)
T KOG0531|consen 150 NLISDI--SGLESLKSLKLLDLSYNRIV-DIENDELSELISLEELDLGGNSIREIEGLDLLKKLVLLSLLDNKISKLEGL 226 (414)
T ss_pred Ccchhc--cCCccchhhhcccCCcchhh-hhhhhhhhhccchHHHhccCCchhcccchHHHHHHHHhhcccccceeccCc
Confidence 999843 34555889999999999998 44442 577889999999999988655444444466668999998754432
Q ss_pred -hhhc--ccchhccCCcCCCC
Q 007107 242 -ELIS--IRTFIYDGNSFDNG 259 (618)
Q Consensus 242 -~~~~--l~~l~~~~N~~~~~ 259 (618)
.... ++.+++.+|+..-.
T Consensus 227 ~~~~~~~L~~l~l~~n~i~~~ 247 (414)
T KOG0531|consen 227 NELVMLHLRELYLSGNRISRS 247 (414)
T ss_pred ccchhHHHHHHhcccCccccc
Confidence 2222 78889999988754
No 487
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.68 E-value=2.2e-07 Score=88.78 Aligned_cols=137 Identities=18% Similarity=0.148 Sum_probs=95.7
Q ss_pred cccceeccCccceEEEEEEcCCcEEEEEEcCcccc------------------c--HHHHHHHHHHHHHhhcCCCC--cc
Q 007107 413 SQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAAL------------------S--LQEEDNFLEAVSNMSRLRHP--NI 470 (618)
Q Consensus 413 ~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~------------------~--~~~~~~~~~e~~~l~~l~h~--ni 470 (618)
.+...||-|.-+.||.|..+.|.++|+|.=..... + .-......+|++.|+++.-. .|
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 44568999999999999999999999985321110 1 11223456888888888644 56
Q ss_pred cccceEEeeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC
Q 007107 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD 550 (618)
Q Consensus 471 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~ 550 (618)
.+.+++ +...+||||+++--|...- ++....-.++..|++-+.-+-+. ||||+|+++-||++++
T Consensus 174 P~P~~~----nRHaVvMe~ieG~eL~~~r---------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~ 237 (304)
T COG0478 174 PKPIAW----NRHAVVMEYIEGVELYRLR---------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTE 237 (304)
T ss_pred CCcccc----ccceeeeehcccceeeccc---------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEec
Confidence 666654 5678999999985554321 12223333444555555555566 9999999999999999
Q ss_pred CCCcEEeeccccccC
Q 007107 551 ELNPHLSDCGLAALT 565 (618)
Q Consensus 551 ~~~~kl~Dfgl~~~~ 565 (618)
+|.+.++||--+...
T Consensus 238 dg~~~vIDwPQ~v~~ 252 (304)
T COG0478 238 DGDIVVIDWPQAVPI 252 (304)
T ss_pred CCCEEEEeCcccccC
Confidence 999999999866443
No 488
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.63 E-value=7.4e-09 Score=103.66 Aligned_cols=174 Identities=21% Similarity=0.194 Sum_probs=125.3
Q ss_pred CEEEEEcCCCCCccccc-ccccCCCCCCEEeecCCCCCCCCCC----CCCCCcceEecccccccccCCccc-ccCCCccE
Q 007107 84 AVVSIDISGLGLSGTMG-YLLSDLLSLRKFDLSGNSIHDTIPY----QLPPNLTSLNLASNNFSGNLPYSI-ASMVSLSY 157 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~p~----~~~~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~ 157 (618)
.+..+.|.+..+.-... .....|++++.||||.|-|....|. +-.++|+.|+|+.|++.-...... ..++.|+.
T Consensus 122 kL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~ 201 (505)
T KOG3207|consen 122 KLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQ 201 (505)
T ss_pred hhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhhe
Confidence 45666666665532211 4667899999999999998854441 223899999999999985544433 36789999
Q ss_pred EEeecCCCCCc-hhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccc--cccCC-CCccEEEcccc
Q 007107 158 LNVSRNSLTQS-IGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSL--NVFSG-LPLTTLNVANN 233 (618)
Q Consensus 158 L~L~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~--~~~~~-~~L~~L~l~~N 233 (618)
|.|+.+.|+.. +...+..+|+|+.|+|..|...+.-.....-+..|+.|+|++|++.... ..... ..|+.|+++.+
T Consensus 202 L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~t 281 (505)
T KOG3207|consen 202 LVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSST 281 (505)
T ss_pred EEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhcccc
Confidence 99999999943 3445567899999999999644344445566788999999999988644 32222 34888888888
Q ss_pred cccc-cCch--------hhhcccchhccCCcCC
Q 007107 234 HFSG-WIPR--------ELISIRTFIYDGNSFD 257 (618)
Q Consensus 234 ~l~g-~ip~--------~~~~l~~l~~~~N~~~ 257 (618)
.++. .+|+ .+.+|+.|....|+..
T Consensus 282 gi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 282 GIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred CcchhcCCCccchhhhcccccceeeecccCccc
Confidence 8864 3343 4678889999988863
No 489
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.62 E-value=5.7e-07 Score=90.18 Aligned_cols=192 Identities=18% Similarity=0.232 Sum_probs=125.6
Q ss_pred cceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceE-----E-ee-CCeEEEEE
Q 007107 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGY-----C-AE-HGQRLLVY 487 (618)
Q Consensus 415 ~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~-----~-~~-~~~~~lv~ 487 (618)
...||+|+.+.+|-..-- +.. +.|++....... ..+...|+. ..-.||-+-.-+.| + -+ .....+.|
T Consensus 16 gr~LgqGgea~ly~l~e~-~d~-VAKIYh~Pppa~--~aqk~a~la--~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 16 GRPLGQGGEADLYTLGEV-RDQ-VAKIYHAPPPAA--QAQKVAELA--ATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CccccCCccceeeecchh-hch-hheeecCCCchH--HHHHHHHhc--cCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 456999999999965221 222 347766543222 222223222 12245543221111 1 11 22356788
Q ss_pred EecCCC-Chhhhhhc--ccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 488 EYVGNG-NLHDMLHF--ADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 488 e~~~~g-sL~~~l~~--~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
..+.+. -+..+++- .+..-....|.-.++.+..++.+.+.||+. |.+-+|+.++|+|+++++.|.+.|=..-..
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccceee
Confidence 877653 23333321 112234578999999999999999999999 999999999999999999999997543332
Q ss_pred CCCCCccccccccccccccCccccc-----cCCccccchhhhHHHHHHHHHhC-CCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTG-RKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg-~~Pf~ 617 (618)
..+ .......+|...|.+||... +...+...|-|.||+++++++.| +.||.
T Consensus 167 ~~n--g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPys 223 (637)
T COG4248 167 NAN--GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYS 223 (637)
T ss_pred ccC--CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCC
Confidence 222 22233457899999999765 34456789999999999999986 99985
No 490
>PRK09902 hypothetical protein; Provisional
Probab=98.60 E-value=5.9e-07 Score=83.95 Aligned_cols=141 Identities=16% Similarity=0.137 Sum_probs=102.4
Q ss_pred eeccCccceEEEEEEcCCcEEEEEEcCccc-cc---HHHHHHHHHHHHHhhcCCCCc--ccccceEEee-----CCeEEE
Q 007107 417 LIGEGSLGRVYRAEFANGKIMAVKKIDNAA-LS---LQEEDNFLEAVSNMSRLRHPN--IVTLAGYCAE-----HGQRLL 485 (618)
Q Consensus 417 ~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~-~~---~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~-----~~~~~l 485 (618)
--|+||.+-|++..+. |+.+-+|+-.... .+ +-....|.+|+..+.++...+ +.++. ++.. .-..+|
T Consensus 25 N~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~L 102 (216)
T PRK09902 25 NYRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALL 102 (216)
T ss_pred CcCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEE
Confidence 4578999999998775 4578888865211 11 224567888988888775333 44444 3321 124689
Q ss_pred EEEecCC-CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCC--cEEeecccc
Q 007107 486 VYEYVGN-GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN--PHLSDCGLA 562 (618)
Q Consensus 486 v~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~--~kl~Dfgl~ 562 (618)
|+|-+++ -+|.+++... ...+.+...+..++.+++..++-||.. |+.|+|+.+.||+++.++. ++++||.-+
T Consensus 103 VTe~L~g~~~L~~~l~~~--~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~ 177 (216)
T PRK09902 103 VTEDMAGFISIADWYAQH--AVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKS 177 (216)
T ss_pred EEEeCCCCccHHHHHhcC--CcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhcc
Confidence 9998764 4888887522 223557777889999999999999999 9999999999999986666 999999877
Q ss_pred cc
Q 007107 563 AL 564 (618)
Q Consensus 563 ~~ 564 (618)
+.
T Consensus 178 r~ 179 (216)
T PRK09902 178 RR 179 (216)
T ss_pred ch
Confidence 54
No 491
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.60 E-value=2e-07 Score=88.90 Aligned_cols=108 Identities=22% Similarity=0.292 Sum_probs=81.2
Q ss_pred HHHHHHHHHHhhcCCCCc--ccccceEEeeC----CeEEEEEEecCCC-ChhhhhhcccCCCCCCCHHHHHHHHHHHHHH
Q 007107 452 EDNFLEAVSNMSRLRHPN--IVTLAGYCAEH----GQRLLVYEYVGNG-NLHDMLHFADDSSKNLTWNARVRVALGTARA 524 (618)
Q Consensus 452 ~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~----~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~ 524 (618)
.....+|...+..+.... +.+.+++.+.. ...++|+|++++. +|.+++... ...+......++.++++.
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~----~~~~~~~~~~ll~~l~~~ 130 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQW----EQLDPSQRRELLRALARL 130 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhh----cccchhhHHHHHHHHHHH
Confidence 345666777666654333 44555665542 2458999999874 799988632 125566778899999999
Q ss_pred HHHHhhcCCCCceecCCCCCCeeecCCC---CcEEeeccccccCC
Q 007107 525 LEYLHEVCLPSVVHRNFKSANILLDDEL---NPHLSDCGLAALTP 566 (618)
Q Consensus 525 L~~LH~~~~~~iiH~Dlkp~NiLl~~~~---~~kl~Dfgl~~~~~ 566 (618)
++-||+. ||+|+|+++.|||++.+. .+.++||+.++...
T Consensus 131 i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 131 IAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 9999999 999999999999999887 89999999886543
No 492
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.53 E-value=2.9e-07 Score=98.34 Aligned_cols=143 Identities=23% Similarity=0.280 Sum_probs=93.3
Q ss_pred ceeccCccceEEEEEEcCCcEEEEEEcCcccccH--------------------------------------HHHHHHHH
Q 007107 416 FLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSL--------------------------------------QEEDNFLE 457 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~--------------------------------------~~~~~~~~ 457 (618)
+.|+.++-|+||+|++++|+.||||+........ ..+-++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 4799999999999999999999999875432110 01123345
Q ss_pred HHHHhhcCC-----CCcccccceEEeeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHH-HHHHhhc
Q 007107 458 AVSNMSRLR-----HPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARA-LEYLHEV 531 (618)
Q Consensus 458 e~~~l~~l~-----h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~-L~~LH~~ 531 (618)
|...+.+++ .++|.=..=+++-.+..+++|||++|-.+.+.... .....+.+. ++..++++ +..+-..
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l---~~~g~d~k~---ia~~~~~~f~~q~~~d 284 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAAL---KSAGIDRKE---LAELLVRAFLRQLLRD 284 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHH---HhcCCCHHH---HHHHHHHHHHHHHHhc
Confidence 555444442 23322222223345678999999999888877431 123344332 33333332 2333334
Q ss_pred CCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 532 CLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 532 ~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
|++|.|..|.||+++.+|++.+.|||+....+.
T Consensus 285 ---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 285 ---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred ---CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 899999999999999999999999999876543
No 493
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.49 E-value=1.9e-07 Score=64.09 Aligned_cols=39 Identities=49% Similarity=1.026 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHHhCCC-C-CCCCCCCCCC-CCCCCCCCceeEee
Q 007107 41 SSDVQALQVLYTSLNS-P-SVLTNWKGNE-GDPCGESWKGVACE 81 (618)
Q Consensus 41 ~~~~~al~~~~~~~~~-~-~~~~~w~~~~-~~~c~~~w~gv~c~ 81 (618)
++|++||++||+++.+ + ..+.+|+.+. .+|| +|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C--~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPC--SWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CC--CSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCe--eeccEEeC
Confidence 5799999999999985 4 5899998764 6777 79999996
No 494
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.46 E-value=6.2e-09 Score=88.01 Aligned_cols=126 Identities=28% Similarity=0.347 Sum_probs=76.6
Q ss_pred EEEEEcCCCCCcccccc---cccCCCCCCEEeecCCCCCCCCCCCCC---CCcceEecccccccccCCcccccCCCccEE
Q 007107 85 VVSIDISGLGLSGTMGY---LLSDLLSLRKFDLSGNSIHDTIPYQLP---PNLTSLNLASNNFSGNLPYSIASMVSLSYL 158 (618)
Q Consensus 85 v~~l~l~~~~l~~~~~~---~l~~l~~L~~L~L~~N~l~~~~p~~~~---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 158 (618)
.-.+||+++.|- .++. .+....+|+..+|++|.|. ..|..+. +.++.|+|++|.|+ .+|..++.++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 334566666552 2333 3445556666677777776 4444443 46777777777777 667777777777777
Q ss_pred EeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccc
Q 007107 159 NVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTG 215 (618)
Q Consensus 159 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 215 (618)
+++.|.|. ..|..+..|.+|..||..+|.+. .+|..+..-+++-..++.+|.+.+
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~ 160 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGD 160 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccc
Confidence 77777776 55666666777777777777776 566553333333333444444443
No 495
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.45 E-value=2.8e-08 Score=97.00 Aligned_cols=174 Identities=18% Similarity=0.255 Sum_probs=129.4
Q ss_pred CEEEEEcCCCCCcccccc----cccCCCCCCEEeecCCCCCCCCC-------------C--CCCCCcceEeccccccccc
Q 007107 84 AVVSIDISGLGLSGTMGY----LLSDLLSLRKFDLSGNSIHDTIP-------------Y--QLPPNLTSLNLASNNFSGN 144 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~----~l~~l~~L~~L~L~~N~l~~~~p-------------~--~~~~~L~~L~L~~N~l~~~ 144 (618)
+++.||||+|-+.-.-+. .|..++.|++|+|.||.+.-.-. . ...++|+++..++|++-..
T Consensus 93 ~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ 172 (382)
T KOG1909|consen 93 KLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENG 172 (382)
T ss_pred ceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccc
Confidence 799999999988644443 45678999999999999871111 1 1127899999999999743
Q ss_pred ----CCcccccCCCccEEEeecCCCCC--c--hhhhhcCCCCCCeEEcccCcCCCC----CCCCcccCCCcCeeeecccc
Q 007107 145 ----LPYSIASMVSLSYLNVSRNSLTQ--S--IGDIFGNLAGLATLDLSFNNFSGD----LPNSFISLSNISSLYLQNNQ 212 (618)
Q Consensus 145 ----~p~~~~~l~~L~~L~L~~N~l~~--~--~p~~~~~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~ 212 (618)
+...|...+.|+.+.+..|.|.. . +...|..+++|+.|||.+|-|+-. +...+..+++|++|+++++.
T Consensus 173 ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcl 252 (382)
T KOG1909|consen 173 GATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCL 252 (382)
T ss_pred cHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccc
Confidence 23456677899999999999873 2 345688899999999999999732 34556778899999999999
Q ss_pred cccc--c---cccC--CCCccEEEccccccccc----Cch---hhhcccchhccCCcCC
Q 007107 213 VTGS--L---NVFS--GLPLTTLNVANNHFSGW----IPR---ELISIRTFIYDGNSFD 257 (618)
Q Consensus 213 l~~~--~---~~~~--~~~L~~L~l~~N~l~g~----ip~---~~~~l~~l~~~~N~~~ 257 (618)
+... . ..+. ..+|+.|.|.+|.++-. +-. ..+.|..|++++|.+.
T Consensus 253 l~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 253 LENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred cccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 9752 2 2222 34699999999999741 111 2456778999999985
No 496
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.45 E-value=3.7e-08 Score=103.41 Aligned_cols=190 Identities=17% Similarity=0.121 Sum_probs=134.1
Q ss_pred hhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCc-ccccceEEeeCCeEE
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN-IVTLAGYCAEHGQRL 484 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~ 484 (618)
+..++-+..-+-.++|+++.++|.+-.-.+....+.+... ....-+++++.+++||| .+..++-+..+...+
T Consensus 238 kDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~-------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~ 310 (829)
T KOG0576|consen 238 KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLW 310 (829)
T ss_pred cCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc-------hhhHHHHHHHHHccCCCCcccccccCCcccccc
Confidence 3344444555568899999999986543333334444221 33456788999999999 777777777778889
Q ss_pred EEEEecCCC-ChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 485 LVYEYVGNG-NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 485 lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++++++..+ +-..... .....+...+...+...-.++++|+|+. .=+||| ||+..+ +..|..||+...
T Consensus 311 i~~~i~s~~rs~~~~~~---~se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~~~v~~ 379 (829)
T KOG0576|consen 311 IPMRICSTGRSSALEMT---VSEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLDFAVPP 379 (829)
T ss_pred hhhhhhcCCccccccCC---hhhHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-cccccccccCCc
Confidence 999999877 2222111 1122334444455566667889999987 458998 777766 588999999887
Q ss_pred cCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCC
Q 007107 564 LTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKP 615 (618)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~P 615 (618)
.+.... ......+|+.|+|||+.....+..+.|+|++|+-..+|--|-+|
T Consensus 380 ~L~~~~--~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pP 429 (829)
T KOG0576|consen 380 QLTRTM--KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPP 429 (829)
T ss_pred ccCccc--ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCC
Confidence 664432 33456899999999999999999999999999877777666655
No 497
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.44 E-value=5e-06 Score=78.05 Aligned_cols=141 Identities=15% Similarity=0.192 Sum_probs=92.8
Q ss_pred hhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHH-------HHHHHHHHHhhcCC---CCcccccceE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEE-------DNFLEAVSNMSRLR---HPNIVTLAGY 476 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~-------~~~~~e~~~l~~l~---h~niv~l~~~ 476 (618)
....+|...+++-.....-|.+.+. +|+.+++|.........+.. ....+++..+.+++ -.....++.+
T Consensus 28 i~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~ 106 (229)
T PF06176_consen 28 ILDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA 106 (229)
T ss_pred HHhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence 4456788888888877777777766 47899999887654322111 11223333333332 2233333333
Q ss_pred Eee-----CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC
Q 007107 477 CAE-----HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (618)
Q Consensus 477 ~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~ 551 (618)
.+. ....+++|||++|..|.++.. +++ .++..+++++.-+|+. |+.|+|..|.|++++++
T Consensus 107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~--------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~~ 171 (229)
T PF06176_consen 107 AEKKIFRYTSSYVLLMEYIEGVELNDIED--------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSNN 171 (229)
T ss_pred eeeeeccceeEEEEEEEEecCeecccchh--------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEECC
Confidence 322 235579999999988776542 222 2445677889999999 99999999999999966
Q ss_pred CCcEEeecccccc
Q 007107 552 LNPHLSDCGLAAL 564 (618)
Q Consensus 552 ~~~kl~Dfgl~~~ 564 (618)
.++++||+..+.
T Consensus 172 -~i~iID~~~k~~ 183 (229)
T PF06176_consen 172 -GIRIIDTQGKRM 183 (229)
T ss_pred -cEEEEECccccc
Confidence 599999987653
No 498
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.41 E-value=3.5e-06 Score=79.89 Aligned_cols=138 Identities=20% Similarity=0.264 Sum_probs=89.9
Q ss_pred eeccCccceEEEEEEcCCcEEEEEEcCcccccHHH----------------------HHHHHHHHHHhhcCC--CCcccc
Q 007107 417 LIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQE----------------------EDNFLEAVSNMSRLR--HPNIVT 472 (618)
Q Consensus 417 ~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~----------------------~~~~~~e~~~l~~l~--h~niv~ 472 (618)
.|.+|.-+.||+|...++..+|+|+++.....-.. ..--..|+..|.++. +-.+.+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~ 134 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE 134 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 46678888999999888999999998643221111 011134555555442 223333
Q ss_pred cceEEeeCCeEEEEEEecCCCChh-hhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC
Q 007107 473 LAGYCAEHGQRLLVYEYVGNGNLH-DMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (618)
Q Consensus 473 l~~~~~~~~~~~lv~e~~~~gsL~-~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~ 551 (618)
.+++ ....|||||++..... =.+ ..-.+...+...+..++++.+.-|-... ++||+||+.-|||+. +
T Consensus 135 Pi~~----~~nVLvMEfIg~~g~pAP~L-----kDv~~e~~e~~~~~~~~v~~~~~l~~~a--~LVHgDLSEyNiL~~-~ 202 (268)
T COG1718 135 PIAF----RNNVLVMEFIGDDGLPAPRL-----KDVPLELEEAEGLYEDVVEYMRRLYKEA--GLVHGDLSEYNILVH-D 202 (268)
T ss_pred ceee----cCCeEEEEeccCCCCCCCCc-----ccCCcCchhHHHHHHHHHHHHHHHHHhc--CcccccchhhheEEE-C
Confidence 3333 2457999999764110 011 1122233356677788888888887732 999999999999999 7
Q ss_pred CCcEEeeccccccCC
Q 007107 552 LNPHLSDCGLAALTP 566 (618)
Q Consensus 552 ~~~kl~Dfgl~~~~~ 566 (618)
+.+.|+|+|-|....
T Consensus 203 ~~p~iID~~QaV~~~ 217 (268)
T COG1718 203 GEPYIIDVSQAVTID 217 (268)
T ss_pred CeEEEEECccccccC
Confidence 799999999986554
No 499
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.39 E-value=4.5e-06 Score=80.71 Aligned_cols=141 Identities=13% Similarity=0.178 Sum_probs=84.1
Q ss_pred ceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCc--ccccceEEeeCCeEEEEEEecCCC
Q 007107 416 FLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN--IVTLAGYCAEHGQRLLVYEYVGNG 493 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~g 493 (618)
..||+|..+.||+. .|..+++|...... ......+|.+.++.+..-. +.+.+++....+...+|||+++|.
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~ 79 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGK 79 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCc
Confidence 46899999999984 25567788876432 2234577888887775433 456677777777888999999986
Q ss_pred C-hhhhh---------------------hcccCCCCCCCHHHHHHHHHH----------HHH-HHHHHhhc-CCCCceec
Q 007107 494 N-LHDML---------------------HFADDSSKNLTWNARVRVALG----------TAR-ALEYLHEV-CLPSVVHR 539 (618)
Q Consensus 494 s-L~~~l---------------------~~~~~~~~~l~~~~~~~i~~~----------i~~-~L~~LH~~-~~~~iiH~ 539 (618)
+ +...+ |........+... ...+..+ +.+ ..++|.+. ..+.++|+
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~-~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~Hg 158 (226)
T TIGR02172 80 RSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSY-KEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHG 158 (226)
T ss_pred cchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHH-HHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEec
Confidence 3 21111 1100001111100 0001000 001 12233221 12357899
Q ss_pred CCCCCCeeecCCCCcEEeeccccccC
Q 007107 540 NFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 540 Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
|+.|.||++++++ +.|+||+.+..-
T Consensus 159 D~~~~Nii~~~~~-~~iIDwe~a~~G 183 (226)
T TIGR02172 159 DFQIGNLITSGKG-TYWIDLGDFGYG 183 (226)
T ss_pred CCCCCcEEEcCCC-cEEEechhcCcC
Confidence 9999999999888 999999987543
No 500
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.37 E-value=4.7e-09 Score=110.88 Aligned_cols=122 Identities=25% Similarity=0.284 Sum_probs=91.9
Q ss_pred CCCEEeecCCCCCCCCCCCC--CCCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhh-hhcCCCCCCeEEc
Q 007107 108 SLRKFDLSGNSIHDTIPYQL--PPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGD-IFGNLAGLATLDL 184 (618)
Q Consensus 108 ~L~~L~L~~N~l~~~~p~~~--~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~l 184 (618)
.|...+.++|.++ .+..++ .+.|+.|||++|+++.. +.+..|++|+.|||++|.|+. +|. .-..+ .|+.|.|
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~-vp~l~~~gc-~L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRH-VPQLSMVGC-KLQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhcc-ccccchhhh-hheeeee
Confidence 4667777888877 333333 38899999999999965 388899999999999999984 333 22233 3999999
Q ss_pred ccCcCCCCCCCCcccCCCcCeeeeccccccccc---cccCCCCccEEEccccccc
Q 007107 185 SFNNFSGDLPNSFISLSNISSLYLQNNQVTGSL---NVFSGLPLTTLNVANNHFS 236 (618)
Q Consensus 185 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~---~~~~~~~L~~L~l~~N~l~ 236 (618)
++|.++ .+ ..+.+|.+|..|||+.|-|.+.- |.+..+.|..|+|.+|.+.
T Consensus 240 rnN~l~-tL-~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 240 RNNALT-TL-RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred cccHHH-hh-hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 999988 33 34778899999999999988732 4455566899999999886
Done!