Query 007107
Match_columns 618
No_of_seqs 636 out of 4717
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 17:20:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007107.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007107hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9d_A Serine/threonine-protei 100.0 1.3E-48 4.3E-53 398.3 17.6 202 410-617 24-226 (350)
2 3omv_A RAF proto-oncogene seri 100.0 5.6E-48 1.9E-52 388.1 17.9 203 406-617 32-238 (307)
3 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.4E-48 8.2E-53 389.8 14.9 201 410-617 32-235 (311)
4 4asz_A BDNF/NT-3 growth factor 100.0 6E-48 2.1E-52 387.9 16.5 205 409-618 12-233 (299)
5 4fih_A Serine/threonine-protei 100.0 1E-47 3.5E-52 391.1 16.9 198 409-617 73-271 (346)
6 3fpq_A Serine/threonine-protei 100.0 4.4E-47 1.5E-51 378.9 19.4 196 413-617 29-230 (290)
7 4aoj_A High affinity nerve gro 100.0 4.5E-47 1.5E-51 386.8 18.6 205 409-618 40-263 (329)
8 4gt4_A Tyrosine-protein kinase 100.0 1.8E-47 6.1E-52 386.1 15.5 205 410-618 26-250 (308)
9 3ubd_A Ribosomal protein S6 ki 100.0 5.4E-48 1.8E-52 387.3 10.7 200 410-617 24-227 (304)
10 4fie_A Serine/threonine-protei 100.0 1E-46 3.4E-51 393.1 18.2 198 409-617 150-348 (423)
11 4g3f_A NF-kappa-beta-inducing 100.0 8E-47 2.7E-51 383.4 15.8 196 409-618 57-258 (336)
12 3hyh_A Carbon catabolite-derep 100.0 1.8E-46 6.3E-51 371.1 17.9 199 410-618 13-214 (275)
13 4ase_A Vascular endothelial gr 100.0 2.2E-45 7.6E-50 377.4 15.7 212 402-617 56-289 (353)
14 3hmm_A TGF-beta receptor type- 100.0 6.1E-45 2.1E-49 368.4 16.6 198 410-616 3-218 (303)
15 4g31_A Eukaryotic translation 100.0 1.5E-44 5.2E-49 363.7 17.9 200 410-617 5-228 (299)
16 4b99_A Mitogen-activated prote 100.0 1.7E-43 6E-48 369.6 19.0 201 409-617 53-264 (398)
17 4f9c_A Cell division cycle 7-r 100.0 1.6E-42 5.4E-47 358.5 18.8 199 405-617 16-248 (361)
18 3v5w_A G-protein coupled recep 100.0 1.5E-42 5.1E-47 377.5 18.5 199 409-617 188-392 (689)
19 3uto_A Twitchin; kinase, muscl 100.0 5.3E-41 1.8E-45 367.9 19.1 199 409-617 156-357 (573)
20 3uim_A Brassinosteroid insensi 100.0 2E-39 6.8E-44 333.0 17.2 219 398-617 18-236 (326)
21 4aw2_A Serine/threonine-protei 100.0 1.5E-39 5.2E-44 345.2 15.5 210 402-617 66-282 (437)
22 3fe3_A MAP/microtubule affinit 100.0 4.6E-39 1.6E-43 330.0 18.5 201 408-617 13-215 (328)
23 3zgw_A Maternal embryonic leuc 100.0 5E-39 1.7E-43 331.7 16.5 205 406-618 6-212 (347)
24 3v8s_A RHO-associated protein 100.0 1.8E-39 6.2E-44 342.0 13.1 207 403-617 62-274 (410)
25 1o6l_A RAC-beta serine/threoni 100.0 1.3E-38 4.6E-43 327.5 18.6 201 409-617 4-206 (337)
26 2qkw_B Protein kinase; three-h 100.0 1.7E-38 6E-43 325.3 19.4 214 399-617 28-242 (321)
27 2vd5_A DMPK protein; serine/th 100.0 4.9E-39 1.7E-43 338.9 14.5 210 402-617 53-271 (412)
28 4eqm_A Protein kinase; transfe 100.0 2.4E-38 8.1E-43 320.1 18.5 203 408-617 9-213 (294)
29 3fxz_A Serine/threonine-protei 100.0 4.8E-38 1.7E-42 318.2 19.2 199 408-617 18-217 (297)
30 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.2E-38 4.2E-43 329.9 15.1 202 408-617 21-225 (353)
31 3p86_A Serine/threonine-protei 100.0 3.4E-38 1.1E-42 321.1 17.8 207 405-617 32-240 (309)
32 4dc2_A Protein kinase C IOTA t 100.0 2.4E-38 8.1E-43 331.7 16.7 201 409-617 51-254 (396)
33 1fot_A TPK1 delta, CAMP-depend 100.0 3.9E-38 1.3E-42 321.6 17.5 198 409-617 5-204 (318)
34 3a8x_A Protein kinase C IOTA t 100.0 6.7E-38 2.3E-42 323.6 19.0 201 409-617 8-211 (345)
35 2bdw_A Hypothetical protein K1 100.0 7.9E-38 2.7E-42 325.4 19.2 202 407-617 26-231 (362)
36 1xjd_A Protein kinase C, theta 100.0 3.8E-38 1.3E-42 325.0 16.6 203 407-617 14-219 (345)
37 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3E-38 1E-42 329.5 15.7 205 405-617 60-286 (365)
38 4fr4_A YANK1, serine/threonine 100.0 6.8E-38 2.3E-42 327.1 18.3 200 409-617 14-218 (384)
39 2yab_A Death-associated protei 100.0 9.8E-38 3.3E-42 324.0 19.1 201 408-617 10-219 (361)
40 3niz_A Rhodanese family protei 100.0 7.6E-38 2.6E-42 319.0 17.8 204 406-617 17-221 (311)
41 3s95_A LIMK-1, LIM domain kina 100.0 2.4E-37 8.3E-42 315.1 21.4 201 409-617 9-223 (310)
42 2psq_A Fibroblast growth facto 100.0 1.4E-37 4.7E-42 324.7 19.5 206 408-617 79-307 (370)
43 3soa_A Calcium/calmodulin-depe 100.0 1.4E-37 4.7E-42 331.4 19.1 203 407-617 8-214 (444)
44 2i0e_A Protein kinase C-beta I 100.0 7.5E-38 2.6E-42 323.8 16.6 202 408-617 18-222 (353)
45 1rdq_E PKA C-alpha, CAMP-depen 100.0 1E-37 3.4E-42 322.8 17.2 198 409-617 40-239 (350)
46 3c0i_A Peripheral plasma membr 100.0 8.2E-38 2.8E-42 324.2 16.5 205 409-617 23-234 (351)
47 4hcu_A Tyrosine-protein kinase 100.0 1.2E-37 4.1E-42 310.6 17.0 201 408-617 8-209 (269)
48 1tki_A Titin; serine kinase, m 100.0 2.6E-37 9E-42 316.2 19.5 198 409-617 4-204 (321)
49 2c30_A Serine/threonine-protei 100.0 3.4E-37 1.2E-41 315.6 19.9 195 412-617 47-242 (321)
50 3a62_A Ribosomal protein S6 ki 100.0 1.1E-37 3.7E-42 320.1 16.2 202 408-617 15-222 (327)
51 2r5t_A Serine/threonine-protei 100.0 1.2E-37 4.2E-42 324.5 16.8 202 408-617 36-240 (373)
52 3tki_A Serine/threonine-protei 100.0 1.1E-37 3.9E-42 319.3 15.9 201 409-617 6-209 (323)
53 1ob3_A PFPK5, cell division co 100.0 1.2E-37 4.1E-42 313.9 15.6 200 410-617 2-202 (288)
54 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.3E-37 8E-42 335.5 18.5 206 408-617 183-390 (543)
55 3gen_A Tyrosine-protein kinase 100.0 1.6E-37 5.6E-42 312.0 16.0 204 405-617 19-223 (283)
56 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.8E-37 6.3E-42 309.0 16.1 202 407-617 5-207 (268)
57 3kul_A Ephrin type-A receptor 100.0 3.2E-37 1.1E-41 316.3 18.2 203 408-617 47-256 (325)
58 3h4j_B AMPK kdaid, SNF1-like p 100.0 2E-37 6.7E-42 318.5 16.2 200 409-618 8-210 (336)
59 3o0g_A Cell division protein k 100.0 4.9E-37 1.7E-41 310.1 18.7 199 410-616 2-202 (292)
60 2y0a_A Death-associated protei 100.0 4.9E-37 1.7E-41 315.1 18.4 201 408-617 9-218 (326)
61 3gni_B Strad alpha; kinase fol 100.0 8.1E-37 2.8E-41 321.5 20.1 205 408-617 23-238 (389)
62 2zv2_A Calcium/calmodulin-depe 100.0 7.4E-37 2.5E-41 309.7 18.7 200 409-617 12-241 (298)
63 3lb7_A RAF proto-oncogene seri 100.0 7.9E-37 2.7E-41 310.8 18.8 202 407-617 33-238 (307)
64 3ork_A Serine/threonine protei 100.0 1.8E-37 6.2E-42 316.2 14.1 203 408-617 10-220 (311)
65 2acx_A G protein-coupled recep 100.0 3.6E-37 1.2E-41 334.7 16.9 204 407-617 181-386 (576)
66 3oz6_A Mitogen-activated prote 100.0 6.4E-37 2.2E-41 322.2 18.0 202 407-617 6-232 (388)
67 2qol_A Ephrin receptor; recept 100.0 4.6E-37 1.6E-41 321.0 16.7 203 408-617 43-252 (373)
68 4ejn_A RAC-alpha serine/threon 100.0 2.3E-37 7.9E-42 331.5 14.5 202 408-617 146-350 (446)
69 1kob_A Twitchin; kinase, intra 100.0 1.9E-36 6.6E-41 317.1 20.4 199 409-617 50-251 (387)
70 3qd2_B Eukaryotic translation 100.0 1E-36 3.5E-41 313.3 18.0 203 409-616 5-276 (332)
71 3cbl_A C-FES, proto-oncogene t 100.0 4.9E-37 1.7E-41 321.6 15.8 206 405-617 109-317 (377)
72 3dbq_A Dual specificity protei 100.0 4.2E-37 1.4E-41 318.0 14.8 201 408-617 7-221 (343)
73 3soc_A Activin receptor type-2 100.0 3.8E-37 1.3E-41 315.4 14.3 204 405-617 19-239 (322)
74 1qcf_A Haematopoetic cell kina 100.0 4.2E-37 1.4E-41 330.0 15.0 204 405-617 183-387 (454)
75 1luf_A Muscle-specific tyrosin 100.0 7.3E-37 2.5E-41 316.1 16.0 210 404-617 41-278 (343)
76 2pmi_A Negative RE, cyclin-dep 100.0 1.2E-36 4.1E-41 311.0 17.2 203 409-617 4-210 (317)
77 2y94_A 5'-AMP-activated protei 100.0 1.3E-36 4.3E-41 326.1 18.1 202 408-618 14-218 (476)
78 2w4o_A Calcium/calmodulin-depe 100.0 1E-36 3.4E-41 315.7 16.7 198 407-617 50-251 (349)
79 3vhe_A Vascular endothelial gr 100.0 5.8E-37 2E-41 319.0 15.0 214 400-617 12-297 (359)
80 3p1a_A MYT1 kinase, membrane-a 100.0 2.1E-36 7.3E-41 308.3 18.8 200 408-617 55-256 (311)
81 4agu_A Cyclin-dependent kinase 100.0 2E-36 6.9E-41 308.4 18.6 200 410-617 3-204 (311)
82 3ttj_A Mitogen-activated prote 100.0 1.4E-36 5E-41 325.9 18.1 198 408-617 60-264 (464)
83 2ivs_A Proto-oncogene tyrosine 100.0 1.2E-36 4.2E-41 310.3 16.7 209 405-617 18-254 (314)
84 4euu_A Serine/threonine-protei 100.0 1.5E-36 5.3E-41 310.5 17.4 203 408-617 7-224 (319)
85 3qup_A Tyrosine-protein kinase 100.0 1E-36 3.5E-41 312.4 16.0 211 404-617 17-241 (323)
86 3l9p_A Anaplastic lymphoma kin 100.0 6.3E-37 2.2E-41 319.4 14.6 206 408-617 69-288 (367)
87 1mp8_A Focal adhesion kinase 1 100.0 9.9E-37 3.4E-41 306.1 15.4 204 406-617 11-219 (281)
88 2izr_A Casein kinase I isoform 100.0 8E-37 2.7E-41 314.2 15.1 198 409-617 8-218 (330)
89 2zmd_A Dual specificity protei 100.0 1.3E-36 4.6E-41 319.4 16.6 200 409-617 55-268 (390)
90 3kk8_A Calcium/calmodulin depe 100.0 3.5E-36 1.2E-40 302.4 18.9 201 408-617 4-208 (284)
91 1opk_A P150, C-ABL, proto-onco 100.0 1.1E-36 3.7E-41 330.0 16.2 205 405-617 215-421 (495)
92 3llt_A Serine/threonine kinase 100.0 3.9E-36 1.3E-40 312.9 19.8 207 398-617 23-260 (360)
93 3tt0_A Basic fibroblast growth 100.0 2.4E-36 8.3E-41 316.9 18.4 208 406-617 65-295 (382)
94 2h34_A Serine/threonine-protei 100.0 3.6E-36 1.2E-40 306.3 18.9 202 409-617 33-236 (309)
95 3rp9_A Mitogen-activated prote 100.0 1.9E-36 6.4E-41 325.7 17.4 196 409-612 52-280 (458)
96 3uc3_A Serine/threonine-protei 100.0 1.6E-36 5.6E-41 315.5 16.3 198 408-617 18-219 (361)
97 1vzo_A Ribosomal protein S6 ki 100.0 4.5E-37 1.5E-41 319.1 11.9 202 409-617 53-263 (355)
98 3kn6_A Ribosomal protein S6 ki 100.0 1.8E-36 6.2E-41 310.6 16.2 190 415-617 16-210 (325)
99 2nru_A Interleukin-1 receptor- 100.0 5.6E-36 1.9E-40 304.5 19.7 215 397-617 12-235 (307)
100 3n9x_A Phosphotransferase; mal 100.0 2.8E-36 9.4E-41 321.5 18.2 200 409-616 25-252 (432)
101 2x4f_A Myosin light chain kina 100.0 2.5E-36 8.5E-41 315.3 17.4 195 413-617 92-289 (373)
102 3t9t_A Tyrosine-protein kinase 100.0 1.6E-36 5.4E-41 302.0 15.2 200 409-617 7-207 (267)
103 3dls_A PAS domain-containing s 100.0 1.2E-36 3.9E-41 313.4 14.5 202 407-617 21-231 (335)
104 2w5a_A Serine/threonine-protei 100.0 1.3E-36 4.4E-41 304.7 14.4 205 409-617 5-217 (279)
105 3hko_A Calcium/calmodulin-depe 100.0 1.3E-36 4.3E-41 314.7 14.4 211 404-617 20-277 (345)
106 1cm8_A Phosphorylated MAP kina 100.0 3.1E-36 1E-40 314.2 17.3 196 409-617 24-227 (367)
107 3kmu_A ILK, integrin-linked ki 100.0 4.1E-36 1.4E-40 299.5 17.5 198 408-617 8-212 (271)
108 3q4u_A Activin receptor type-1 100.0 2.9E-36 1E-40 305.6 16.4 196 408-617 6-234 (301)
109 3pfq_A PKC-B, PKC-beta, protei 100.0 2.2E-36 7.7E-41 338.4 16.9 202 408-617 339-543 (674)
110 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.4E-36 4.8E-41 325.6 14.5 203 406-617 180-383 (452)
111 3is5_A Calcium-dependent prote 100.0 3E-36 1E-40 303.2 15.5 203 408-617 20-226 (285)
112 4aaa_A Cyclin-dependent kinase 100.0 5.3E-36 1.8E-40 308.2 17.7 201 409-617 24-226 (331)
113 3op5_A Serine/threonine-protei 100.0 1.8E-36 6.2E-41 315.8 14.4 204 407-617 32-262 (364)
114 3ugc_A Tyrosine-protein kinase 100.0 2.5E-36 8.4E-41 305.4 14.9 202 408-617 8-218 (295)
115 2eue_A Carbon catabolite derep 100.0 5.7E-36 1.9E-40 299.5 17.2 200 409-618 12-214 (275)
116 2a2a_A Death-associated protei 100.0 4.8E-36 1.6E-40 307.1 17.1 201 408-617 10-219 (321)
117 1u5q_A Serine/threonine protei 100.0 4.7E-36 1.6E-40 310.3 17.1 198 408-617 52-254 (348)
118 1qpc_A LCK kinase; alpha beta 100.0 3.6E-36 1.2E-40 301.6 15.7 204 405-617 8-212 (279)
119 3fdn_A Serine/threonine-protei 100.0 4.1E-36 1.4E-40 301.2 16.2 200 408-617 7-208 (279)
120 3g33_A Cell division protein k 100.0 5.7E-36 2E-40 304.7 17.3 203 407-617 6-220 (308)
121 1t46_A HOMO sapiens V-KIT hard 100.0 4.9E-36 1.7E-40 305.7 16.6 208 406-617 19-249 (313)
122 3og7_A AKAP9-BRAF fusion prote 100.0 3.6E-36 1.2E-40 303.3 15.4 203 406-617 20-226 (289)
123 3gbz_A Kinase, CMGC CDK; ssgci 100.0 3E-36 1E-40 309.7 15.2 202 407-617 31-239 (329)
124 3kfa_A Tyrosine-protein kinase 100.0 3E-36 1E-40 303.5 14.8 205 405-617 8-214 (288)
125 3cok_A Serine/threonine-protei 100.0 5.7E-36 2E-40 299.9 16.7 203 408-617 9-213 (278)
126 2rku_A Serine/threonine-protei 100.0 1.3E-35 4.4E-40 299.9 19.4 202 408-617 13-216 (294)
127 1x8b_A WEE1HU, WEE1-like prote 100.0 6.4E-36 2.2E-40 300.8 17.0 202 408-617 9-232 (289)
128 2yex_A Serine/threonine-protei 100.0 1E-35 3.5E-40 297.6 18.3 201 409-617 6-209 (276)
129 3dtc_A Mitogen-activated prote 100.0 3.6E-36 1.2E-40 300.1 14.9 201 408-617 5-215 (271)
130 1rjb_A FL cytokine receptor; k 100.0 3.3E-36 1.1E-40 311.4 15.1 209 405-617 40-276 (344)
131 1t4h_A Serine/threonine-protei 100.0 1.7E-35 5.7E-40 298.5 19.8 198 409-617 25-230 (290)
132 3brb_A Proto-oncogene tyrosine 100.0 9.1E-36 3.1E-40 303.9 18.1 212 403-617 27-251 (313)
133 2owb_A Serine/threonine-protei 100.0 1.2E-35 4E-40 306.1 18.7 202 408-617 39-242 (335)
134 1p4o_A Insulin-like growth fac 100.0 5E-36 1.7E-40 307.1 15.8 214 400-617 15-242 (322)
135 3f3z_A Calcium/calmodulin-depe 100.0 1E-35 3.6E-40 297.9 17.8 198 408-617 7-208 (277)
136 3poz_A Epidermal growth factor 100.0 2.9E-36 1E-40 309.5 14.1 201 409-617 14-221 (327)
137 2pvf_A Fibroblast growth facto 100.0 9.7E-36 3.3E-40 306.6 18.0 207 407-617 32-261 (334)
138 1nxk_A MAP kinase-activated pr 100.0 9.1E-36 3.1E-40 314.0 18.1 194 410-617 61-264 (400)
139 2qr7_A Ribosomal protein S6 ki 100.0 3.1E-36 1.1E-40 310.8 14.2 196 408-617 20-221 (342)
140 3i6u_A CDS1, serine/threonine- 100.0 1.3E-35 4.4E-40 315.0 19.2 201 407-617 132-345 (419)
141 3mi9_A Cell division protein k 100.0 1E-35 3.5E-40 308.6 17.9 202 409-617 16-230 (351)
142 2wqm_A Serine/threonine-protei 100.0 1.8E-35 6E-40 301.3 19.2 206 408-617 30-237 (310)
143 4f0f_A Serine/threonine-protei 100.0 1.8E-35 6.3E-40 297.7 19.1 198 408-617 17-229 (287)
144 2fst_X Mitogen-activated prote 100.0 7.3E-36 2.5E-40 311.0 16.7 196 409-617 28-231 (367)
145 3fme_A Dual specificity mitoge 100.0 6.1E-36 2.1E-40 301.5 15.5 206 407-617 4-214 (290)
146 1k9a_A Carboxyl-terminal SRC k 100.0 7.3E-36 2.5E-40 319.9 17.0 197 407-617 190-388 (450)
147 3lm5_A Serine/threonine-protei 100.0 9.3E-36 3.2E-40 305.8 16.7 211 400-617 18-234 (327)
148 1csn_A Casein kinase-1; phosph 100.0 1E-35 3.5E-40 301.1 16.7 199 408-617 8-219 (298)
149 3mwu_A Calmodulin-domain prote 100.0 7.7E-36 2.6E-40 323.2 16.5 200 408-617 20-223 (486)
150 3lij_A Calcium/calmodulin depe 100.0 8E-36 2.7E-40 323.7 16.7 201 407-617 34-238 (494)
151 3kex_A Receptor tyrosine-prote 100.0 3.4E-36 1.2E-40 308.8 12.9 201 409-617 12-219 (325)
152 2xrw_A Mitogen-activated prote 100.0 1.6E-35 5.6E-40 309.4 18.2 197 409-617 24-227 (371)
153 3mtl_A Cell division protein k 100.0 4.1E-36 1.4E-40 308.0 12.9 199 410-617 2-202 (324)
154 3byv_A Rhoptry kinase; malaria 100.0 1.4E-36 4.9E-41 318.1 9.6 202 407-617 70-314 (377)
155 2h8h_A Proto-oncogene tyrosine 100.0 2.7E-36 9.2E-41 329.9 12.0 204 405-617 262-466 (535)
156 2vgo_A Serine/threonine-protei 100.0 1.5E-35 5.2E-40 297.8 16.5 199 409-617 13-213 (284)
157 1u59_A Tyrosine-protein kinase 100.0 1.9E-35 6.7E-40 297.6 17.3 201 409-617 8-215 (287)
158 2buj_A Serine/threonine-protei 100.0 1.7E-35 5.7E-40 302.5 17.0 207 406-617 25-247 (317)
159 3an0_A Dual specificity mitoge 100.0 1E-35 3.4E-40 307.3 15.5 206 406-617 47-258 (340)
160 3bhy_A Death-associated protei 100.0 1.6E-35 5.5E-40 297.4 16.5 200 409-617 4-212 (283)
161 3eqc_A Dual specificity mitoge 100.0 1.1E-35 3.8E-40 309.5 15.8 200 408-617 31-231 (360)
162 3eb0_A Putative uncharacterize 100.0 1.4E-35 4.7E-40 311.3 16.5 200 406-617 3-243 (383)
163 3cc6_A Protein tyrosine kinase 100.0 1.1E-35 3.9E-40 298.3 15.1 203 407-617 9-216 (281)
164 3lxp_A Non-receptor tyrosine-p 100.0 2.2E-35 7.6E-40 301.8 17.4 197 412-617 33-238 (318)
165 4e5w_A Tyrosine-protein kinase 100.0 8.8E-36 3E-40 302.3 14.2 202 409-617 20-230 (302)
166 2r3i_A Cell division protein k 100.0 2.1E-35 7.2E-40 299.0 16.8 201 410-617 3-205 (299)
167 4eut_A Serine/threonine-protei 100.0 6.3E-36 2.2E-40 315.3 13.4 203 408-617 7-224 (396)
168 2eva_A TAK1 kinase - TAB1 chim 100.0 1.7E-35 5.8E-40 301.0 16.1 197 409-617 7-204 (307)
169 2xir_A Vascular endothelial gr 100.0 1.4E-35 4.9E-40 302.7 15.5 212 402-617 19-252 (316)
170 3nyv_A Calmodulin-domain prote 100.0 9.3E-36 3.2E-40 322.6 14.8 201 407-617 23-228 (484)
171 3a7i_A MST3 kinase, serine/thr 100.0 4.5E-35 1.5E-39 297.3 18.9 200 408-617 20-220 (303)
172 1xbb_A Tyrosine-protein kinase 100.0 1.3E-35 4.5E-40 299.5 14.9 202 408-617 14-222 (291)
173 2ac3_A MAP kinase-interacting 100.0 1.7E-35 5.8E-40 302.2 15.9 200 409-617 11-227 (316)
174 3q5i_A Protein kinase; CDPK, m 100.0 3.3E-35 1.1E-39 319.7 18.8 202 406-617 32-248 (504)
175 1mqb_A Ephrin type-A receptor 100.0 2.6E-35 9E-40 303.2 17.1 203 408-617 42-252 (333)
176 3c1x_A Hepatocyte growth facto 100.0 1.6E-35 5.6E-40 309.0 15.7 201 410-617 89-298 (373)
177 2y7j_A Phosphorylase B kinase 100.0 3.5E-35 1.2E-39 306.0 18.2 203 406-617 90-306 (365)
178 2jam_A Calcium/calmodulin-depe 100.0 2.7E-35 9.1E-40 299.2 16.7 198 408-617 7-208 (304)
179 3pg1_A Mitogen-activated prote 100.0 4.4E-35 1.5E-39 305.2 18.6 207 402-617 14-235 (362)
180 2v62_A Serine/threonine-protei 100.0 1.1E-35 3.9E-40 307.5 13.7 202 408-617 35-261 (345)
181 1ua2_A CAK, cell division prot 100.0 2.3E-35 7.8E-40 305.3 15.9 203 407-617 7-214 (346)
182 1j1b_A Glycogen synthase kinas 100.0 1.5E-35 5.2E-40 314.5 14.8 197 409-617 53-258 (420)
183 2pml_X PFPK7, Ser/Thr protein 100.0 3E-35 1E-39 304.7 16.5 204 407-617 28-253 (348)
184 2h6d_A 5'-AMP-activated protei 100.0 3.6E-35 1.2E-39 293.8 16.3 201 408-617 9-212 (276)
185 4exu_A Mitogen-activated prote 100.0 5.6E-35 1.9E-39 305.3 18.2 196 408-617 40-243 (371)
186 2i1m_A Macrophage colony-stimu 100.0 1E-35 3.5E-40 306.3 12.4 209 405-617 41-268 (333)
187 3f66_A Hepatocyte growth facto 100.0 5.2E-35 1.8E-39 296.0 17.4 203 408-617 23-234 (298)
188 2ozo_A Tyrosine-protein kinase 100.0 3.1E-35 1E-39 326.2 16.7 200 410-617 335-541 (613)
189 3lzb_A Epidermal growth factor 100.0 2.7E-35 9.3E-40 302.2 15.0 201 409-617 14-221 (327)
190 1fvr_A Tyrosine-protein kinase 100.0 3.7E-35 1.3E-39 301.3 15.8 203 409-617 24-243 (327)
191 3q60_A ROP5B; pseudokinase, tr 100.0 1.1E-35 3.9E-40 310.6 12.1 198 408-617 60-294 (371)
192 3qyz_A Mitogen-activated prote 100.0 7.4E-35 2.5E-39 303.7 18.1 199 409-617 26-233 (364)
193 4e7w_A Glycogen synthase kinas 100.0 3.1E-35 1.1E-39 309.5 15.3 198 408-617 38-243 (394)
194 2x7f_A TRAF2 and NCK-interacti 100.0 3.9E-35 1.3E-39 301.0 15.5 209 400-617 14-235 (326)
195 4fl3_A Tyrosine-protein kinase 100.0 2.4E-35 8.2E-40 327.8 14.9 194 416-617 375-574 (635)
196 2ycf_A Serine/threonine-protei 100.0 4.9E-35 1.7E-39 299.7 16.0 200 408-617 8-220 (322)
197 3com_A Serine/threonine-protei 100.0 7.5E-35 2.6E-39 297.2 17.1 200 407-617 26-226 (314)
198 3pls_A Macrophage-stimulating 100.0 1E-34 3.5E-39 293.8 17.9 200 410-616 21-228 (298)
199 3lxl_A Tyrosine-protein kinase 100.0 3.6E-35 1.2E-39 301.4 14.8 201 409-617 22-231 (327)
200 3mdy_A Bone morphogenetic prot 100.0 1.3E-34 4.6E-39 298.3 18.9 198 404-612 31-248 (337)
201 4fvq_A Tyrosine-protein kinase 100.0 2.5E-35 8.7E-40 296.9 13.0 196 408-616 6-219 (289)
202 2vwi_A Serine/threonine-protei 100.0 2.3E-35 7.7E-40 299.2 12.5 207 407-617 12-228 (303)
203 3rgf_A Cyclin-dependent kinase 100.0 3.3E-35 1.1E-39 310.9 14.1 200 410-617 20-237 (405)
204 3kvw_A DYRK2, dual specificity 100.0 1.4E-34 4.9E-39 307.7 19.1 198 407-617 94-300 (429)
205 1blx_A Cyclin-dependent kinase 100.0 4.3E-35 1.5E-39 300.6 14.3 203 407-617 8-220 (326)
206 4hgt_A Casein kinase I isoform 100.0 7.7E-35 2.6E-39 294.3 15.9 199 408-617 7-216 (296)
207 3cek_A Dual specificity protei 100.0 5.2E-35 1.8E-39 298.3 14.5 209 400-617 18-240 (313)
208 2yfx_A Tyrosine-protein kinase 100.0 6.9E-35 2.4E-39 299.3 15.5 207 407-617 27-247 (327)
209 2a19_B Interferon-induced, dou 100.0 5E-35 1.7E-39 293.8 14.2 197 407-616 8-221 (284)
210 3nsz_A CK II alpha, casein kin 100.0 2E-34 6.7E-39 296.3 18.8 192 409-617 35-232 (330)
211 3coi_A Mitogen-activated prote 100.0 1.4E-34 4.8E-39 300.3 17.7 195 409-617 23-225 (353)
212 3gxj_A TGF-beta receptor type- 100.0 2.5E-36 8.4E-41 306.4 4.4 190 409-612 2-214 (303)
213 2jii_A Serine/threonine-protei 100.0 2.2E-35 7.6E-40 306.2 11.3 196 409-617 41-269 (352)
214 1phk_A Phosphorylase kinase; g 100.0 2.2E-34 7.4E-39 291.4 18.1 201 408-617 15-230 (298)
215 1b6c_B TGF-B superfamily recep 100.0 1.2E-34 4E-39 299.4 16.4 202 402-617 34-268 (342)
216 3ll6_A Cyclin G-associated kin 100.0 8.7E-35 3E-39 299.5 15.2 206 405-617 23-254 (337)
217 3uzp_A CKI-delta, CKID, casein 100.0 2E-34 6.8E-39 291.3 17.4 199 408-617 7-216 (296)
218 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.1E-35 1.1E-39 300.7 11.4 208 401-617 24-244 (319)
219 1byg_A CSK, protein (C-termina 100.0 5.1E-35 1.7E-39 293.1 12.6 197 407-617 18-216 (278)
220 2wtk_C Serine/threonine-protei 100.0 3.1E-34 1.1E-38 291.3 18.4 203 409-617 4-214 (305)
221 2clq_A Mitogen-activated prote 100.0 2.9E-34 9.9E-39 290.0 18.1 202 409-617 21-226 (295)
222 2wei_A Calmodulin-domain prote 100.0 1.4E-34 4.9E-39 291.2 15.7 201 407-617 19-223 (287)
223 2b9h_A MAP kinase FUS3, mitoge 100.0 1.9E-34 6.6E-39 299.2 17.0 200 408-617 9-224 (353)
224 3e3p_A Protein kinase, putativ 100.0 1.7E-34 5.7E-39 300.5 16.2 205 404-617 17-233 (360)
225 2i6l_A Mitogen-activated prote 100.0 2.9E-34 9.8E-39 293.4 17.6 199 408-617 9-226 (320)
226 2j7t_A Serine/threonine-protei 100.0 9.4E-35 3.2E-39 294.7 13.2 201 408-617 17-223 (302)
227 2w1i_A JAK2; chromosomal rearr 100.0 1.5E-34 5.2E-39 296.6 15.0 202 408-617 39-249 (326)
228 2j0j_A Focal adhesion kinase 1 100.0 2.3E-34 7.8E-39 321.1 17.4 205 405-617 385-594 (656)
229 3g2f_A Bone morphogenetic prot 100.0 6.4E-35 2.2E-39 300.7 12.1 200 408-616 11-235 (336)
230 1z57_A Dual specificity protei 100.0 5E-34 1.7E-38 294.0 17.3 198 407-617 11-235 (339)
231 1wak_A Serine/threonine-protei 100.0 2.9E-34 1E-38 302.6 15.5 200 406-617 33-294 (397)
232 1u46_A ACK-1, activated CDC42 100.0 1.7E-34 5.9E-39 291.0 12.7 202 409-617 17-226 (291)
233 3aln_A Dual specificity mitoge 100.0 5.2E-34 1.8E-38 292.7 16.0 204 408-617 20-230 (327)
234 3sv0_A Casein kinase I-like; t 100.0 7.6E-34 2.6E-38 305.1 17.9 199 408-617 5-214 (483)
235 2vx3_A Dual specificity tyrosi 100.0 8.4E-34 2.9E-38 297.7 17.7 206 401-617 45-259 (382)
236 3a99_A Proto-oncogene serine/t 100.0 1.4E-34 4.7E-39 296.1 10.7 203 405-617 38-250 (320)
237 2rio_A Serine/threonine-protei 100.0 3.3E-34 1.1E-38 305.5 13.7 199 410-617 15-241 (434)
238 1zy4_A Serine/threonine-protei 100.0 1.3E-33 4.5E-38 286.1 17.3 194 409-611 5-226 (303)
239 2dyl_A Dual specificity mitoge 100.0 1E-33 3.4E-38 289.3 15.6 204 406-617 21-230 (318)
240 3fhr_A MAP kinase-activated pr 100.0 1.3E-33 4.4E-38 290.9 15.9 196 408-617 26-230 (336)
241 2iwi_A Serine/threonine-protei 100.0 2.4E-34 8.4E-39 293.1 10.3 202 406-617 27-240 (312)
242 2eu9_A Dual specificity protei 100.0 2.3E-33 7.8E-38 291.1 17.4 200 405-617 14-240 (355)
243 2pzi_A Probable serine/threoni 100.0 1.7E-33 5.8E-38 317.0 15.9 194 407-617 77-277 (681)
244 2vuw_A Serine/threonine-protei 100.0 1.2E-34 4E-39 298.8 5.5 193 409-617 19-278 (336)
245 3p23_A Serine/threonine-protei 100.0 2E-33 7E-38 298.7 15.1 198 408-617 22-231 (432)
246 1q8y_A SR protein kinase; tran 100.0 2.4E-33 8.1E-38 293.2 14.8 197 409-617 18-236 (373)
247 1ogq_A PGIP-2, polygalacturona 100.0 4.6E-33 1.6E-37 283.6 15.8 220 38-258 2-235 (313)
248 3qa8_A MGC80376 protein; kinas 100.0 1.8E-33 6.2E-38 308.6 13.4 202 409-617 13-224 (676)
249 3uqc_A Probable conserved tran 100.0 3.2E-32 1.1E-36 273.7 17.8 173 408-617 29-203 (286)
250 3dzo_A Rhoptry kinase domain; 100.0 5.1E-33 1.7E-37 294.4 8.6 203 406-617 74-318 (413)
251 3m2w_A MAP kinase-activated pr 100.0 9.1E-31 3.1E-35 265.0 16.9 174 409-617 16-199 (299)
252 4azs_A Methyltransferase WBDD; 100.0 1.2E-30 4.1E-35 285.8 5.4 185 418-614 242-436 (569)
253 4ecn_A Leucine-rich repeat pro 100.0 3.5E-29 1.2E-33 284.9 10.2 214 38-257 265-608 (876)
254 3rgz_A Protein brassinosteroid 99.9 3.3E-28 1.1E-32 277.9 13.5 220 34-258 4-261 (768)
255 4eco_A Uncharacterized protein 99.9 1.5E-28 5E-33 274.6 9.1 213 40-257 28-366 (636)
256 4fcg_A Uncharacterized protein 99.9 1.8E-27 6.2E-32 243.8 9.4 214 39-258 24-267 (328)
257 3en9_A Glycoprotease, O-sialog 99.9 2.8E-27 9.5E-32 257.8 10.5 187 413-617 339-539 (540)
258 3rgz_A Protein brassinosteroid 99.9 1.8E-24 6E-29 247.1 14.1 179 83-261 490-744 (768)
259 2o6q_A Variable lymphocyte rec 99.9 1.3E-23 4.3E-28 209.2 17.4 187 74-260 17-221 (270)
260 2o6s_A Variable lymphocyte rec 99.9 3.9E-24 1.3E-28 204.2 12.2 175 69-248 3-190 (208)
261 1ogq_A PGIP-2, polygalacturona 99.9 4.8E-24 1.6E-28 216.9 9.5 174 83-257 101-281 (313)
262 3m19_A Variable lymphocyte rec 99.9 3.6E-23 1.2E-27 203.5 14.6 183 74-260 6-195 (251)
263 1zar_A RIO2 kinase; serine kin 99.9 1.9E-23 6.5E-28 208.7 11.3 161 409-602 89-275 (282)
264 1p9a_G Platelet glycoprotein I 99.9 1.3E-22 4.5E-27 203.8 15.7 176 83-260 31-211 (290)
265 2z62_A TOLL-like receptor 4, v 99.9 1.3E-22 4.4E-27 202.6 14.5 134 84-217 29-165 (276)
266 1ozn_A Reticulon 4 receptor; N 99.9 6.3E-22 2.2E-26 198.5 16.3 175 84-258 33-215 (285)
267 3zyi_A Leucine-rich repeat-con 99.9 6.8E-22 2.3E-26 211.8 16.4 185 74-258 55-256 (452)
268 1ozn_A Reticulon 4 receptor; N 99.9 8.6E-22 2.9E-26 197.5 15.5 178 83-260 56-241 (285)
269 3m19_A Variable lymphocyte rec 99.9 1.3E-21 4.4E-26 192.4 16.4 167 74-240 15-196 (251)
270 3j0a_A TOLL-like receptor 5; m 99.9 1.1E-21 3.8E-26 226.2 16.5 178 83-260 290-563 (844)
271 2z66_A Variable lymphocyte rec 99.9 3.3E-22 1.1E-26 202.7 10.0 190 69-259 3-214 (306)
272 4fcg_A Uncharacterized protein 99.9 1.5E-21 5E-26 199.8 14.7 172 83-258 104-291 (328)
273 3rfs_A Internalin B, repeat mo 99.9 5.5E-21 1.9E-25 190.2 16.7 175 83-259 41-220 (272)
274 3zyj_A Leucine-rich repeat-con 99.9 3.5E-21 1.2E-25 205.5 15.7 185 74-258 44-245 (440)
275 1xku_A Decorin; proteoglycan, 99.8 1.3E-20 4.6E-25 193.0 17.2 195 60-258 18-230 (330)
276 3v47_A TOLL-like receptor 5B a 99.8 3.6E-21 1.2E-25 206.3 12.9 150 69-218 6-171 (455)
277 2z66_A Variable lymphocyte rec 99.8 2.7E-21 9.2E-26 196.0 11.0 177 83-260 78-264 (306)
278 2v70_A SLIT-2, SLIT homolog 2 99.8 3.5E-21 1.2E-25 185.1 10.7 151 87-240 15-170 (220)
279 2xwt_C Thyrotropin receptor; s 99.8 5.8E-21 2E-25 186.3 11.6 189 69-259 6-220 (239)
280 2xot_A Amphoterin-induced prot 99.8 1.9E-20 6.6E-25 194.3 15.8 171 87-260 22-205 (361)
281 1w8a_A SLIT protein; signaling 99.8 5E-21 1.7E-25 180.0 10.2 171 87-260 12-186 (192)
282 2v9t_B SLIT homolog 2 protein 99.8 1.5E-20 5.3E-25 180.6 13.6 156 69-237 7-166 (220)
283 3rfs_A Internalin B, repeat mo 99.8 1E-20 3.4E-25 188.3 12.2 171 82-258 62-236 (272)
284 1wwl_A Monocyte differentiatio 99.8 7.7E-21 2.6E-25 193.2 11.0 175 83-259 95-289 (312)
285 2id5_A Lingo-1, leucine rich r 99.8 1.8E-20 6.2E-25 202.2 14.2 184 74-257 12-213 (477)
286 1wwl_A Monocyte differentiatio 99.8 3.9E-21 1.3E-25 195.4 8.5 172 85-257 65-266 (312)
287 2ft3_A Biglycan; proteoglycan, 99.8 3.1E-20 1.1E-24 190.5 15.1 186 69-259 29-232 (332)
288 3e6j_A Variable lymphocyte rec 99.8 3.7E-20 1.2E-24 179.2 14.0 155 72-240 18-176 (229)
289 2z80_A TOLL-like receptor 2, v 99.8 1.2E-20 4.1E-25 195.3 11.3 187 71-259 28-237 (353)
290 4glp_A Monocyte differentiatio 99.8 9.5E-21 3.3E-25 192.3 10.0 173 84-258 92-286 (310)
291 3oja_B Anopheles plasmodium-re 99.8 2.5E-20 8.5E-25 206.7 13.4 132 84-215 52-185 (597)
292 3v47_A TOLL-like receptor 5B a 99.8 4.3E-20 1.5E-24 198.0 14.2 105 154-258 276-385 (455)
293 3zyj_A Leucine-rich repeat-con 99.8 6.6E-20 2.3E-24 195.6 15.2 178 83-260 88-295 (440)
294 1ziw_A TOLL-like receptor 3; i 99.8 6.4E-20 2.2E-24 206.9 15.4 174 71-244 2-192 (680)
295 3cvr_A Invasion plasmid antige 99.8 1.9E-20 6.6E-25 203.9 10.6 161 60-241 33-197 (571)
296 2v70_A SLIT-2, SLIT homolog 2 99.8 2E-19 7E-24 172.8 16.3 149 69-217 7-169 (220)
297 2z81_A CD282 antigen, TOLL-lik 99.8 2.5E-20 8.7E-25 204.7 11.2 184 74-259 5-211 (549)
298 3zyi_A Leucine-rich repeat-con 99.8 6.4E-20 2.2E-24 196.4 13.5 178 83-260 99-306 (452)
299 3oja_A Leucine-rich immune mol 99.8 2.1E-20 7.2E-25 201.6 9.8 167 84-258 59-228 (487)
300 3vq2_A TLR4, TOLL-like recepto 99.8 5.4E-20 1.8E-24 204.6 12.5 189 69-257 5-217 (606)
301 3o6n_A APL1; leucine-rich repe 99.8 8E-20 2.7E-24 191.8 12.9 172 83-258 45-219 (390)
302 3e6j_A Variable lymphocyte rec 99.8 2.1E-19 7.3E-24 173.8 14.5 150 110-260 22-175 (229)
303 4eco_A Uncharacterized protein 99.8 2.3E-20 7.9E-25 208.2 8.5 175 82-259 205-417 (636)
304 2v9t_B SLIT homolog 2 protein 99.8 1.9E-19 6.5E-24 173.0 13.6 150 110-260 14-168 (220)
305 3oja_A Leucine-rich immune mol 99.8 2.8E-20 9.7E-25 200.6 8.6 170 82-260 79-253 (487)
306 3vq2_A TLR4, TOLL-like recepto 99.8 6.7E-20 2.3E-24 203.9 11.6 175 84-260 377-561 (606)
307 3t6q_A CD180 antigen; protein- 99.8 1.3E-19 4.3E-24 201.6 13.3 177 83-260 376-563 (606)
308 1h6u_A Internalin H; cell adhe 99.8 2.2E-19 7.6E-24 181.9 13.8 171 82-260 62-233 (308)
309 2ft3_A Biglycan; proteoglycan, 99.8 3.6E-19 1.2E-23 182.6 15.3 176 82-259 77-279 (332)
310 3oja_B Anopheles plasmodium-re 99.8 1.1E-19 3.7E-24 201.6 11.8 173 83-256 99-336 (597)
311 3j0a_A TOLL-like receptor 5; m 99.8 1.2E-19 4E-24 209.4 12.3 186 73-258 14-218 (844)
312 2xot_A Amphoterin-induced prot 99.8 9.4E-20 3.2E-24 189.0 10.2 168 69-237 14-203 (361)
313 3t6q_A CD180 antigen; protein- 99.8 2.5E-19 8.6E-24 199.2 14.1 181 75-255 14-213 (606)
314 1ziw_A TOLL-like receptor 3; i 99.8 4.4E-19 1.5E-23 200.0 16.0 178 83-261 405-626 (680)
315 3o6n_A APL1; leucine-rich repe 99.8 1.8E-19 6.2E-24 189.1 11.9 174 83-258 93-332 (390)
316 2o6q_A Variable lymphocyte rec 99.8 1E-18 3.5E-23 173.6 16.3 156 83-238 61-220 (270)
317 4ezg_A Putative uncharacterize 99.8 4.7E-19 1.6E-23 167.2 12.9 151 83-237 44-195 (197)
318 2z80_A TOLL-like receptor 2, v 99.8 1.5E-19 5E-24 187.1 10.1 155 83-237 76-236 (353)
319 4g8a_A TOLL-like receptor 4; l 99.8 5E-19 1.7E-23 197.6 15.2 171 84-254 53-234 (635)
320 4ecn_A Leucine-rich repeat pro 99.8 1.2E-19 4E-24 206.7 9.7 174 82-259 447-659 (876)
321 4b8c_D Glucose-repressible alc 99.8 1E-20 3.5E-25 213.4 1.0 207 41-258 131-355 (727)
322 3a79_B TLR6, VLRB.59, TOLL-lik 99.8 3.1E-19 1.1E-23 196.5 12.8 174 84-258 277-487 (562)
323 4glp_A Monocyte differentiatio 99.8 1.3E-19 4.4E-24 184.0 8.9 176 82-258 116-308 (310)
324 1xku_A Decorin; proteoglycan, 99.8 6.2E-19 2.1E-23 180.6 13.8 167 84-257 101-276 (330)
325 2z7x_B TOLL-like receptor 1, v 99.8 2.4E-19 8.1E-24 195.6 10.8 175 84-259 248-459 (520)
326 2xwt_C Thyrotropin receptor; s 99.8 3E-19 1E-23 174.1 10.3 169 83-254 55-236 (239)
327 2o6s_A Variable lymphocyte rec 99.8 1.8E-18 6E-23 164.8 15.2 172 77-258 4-179 (208)
328 3o53_A Protein LRIM1, AGAP0063 99.8 1.7E-19 5.7E-24 183.7 8.5 168 82-257 57-227 (317)
329 1zth_A RIO1 serine protein kin 99.8 3.9E-19 1.3E-23 175.2 10.3 139 412-566 49-220 (258)
330 3o53_A Protein LRIM1, AGAP0063 99.8 2.2E-19 7.5E-24 182.8 8.6 168 83-259 34-206 (317)
331 2id5_A Lingo-1, leucine rich r 99.8 8.6E-19 3E-23 189.0 13.7 178 83-260 128-336 (477)
332 1p9a_G Platelet glycoprotein I 99.8 2.3E-18 7.8E-23 172.8 15.7 153 82-237 54-209 (290)
333 1h6t_A Internalin B; cell adhe 99.8 1.9E-18 6.5E-23 173.5 13.8 169 83-260 46-216 (291)
334 1w8a_A SLIT protein; signaling 99.8 4E-18 1.4E-22 160.1 13.7 149 110-259 11-164 (192)
335 3cvr_A Invasion plasmid antige 99.8 3.5E-18 1.2E-22 186.1 14.7 156 83-259 80-245 (571)
336 2z63_A TOLL-like receptor 4, v 99.8 7.5E-19 2.6E-23 193.8 9.4 177 83-260 347-534 (570)
337 1h6u_A Internalin H; cell adhe 99.8 7.2E-18 2.4E-22 170.8 15.5 170 83-260 41-211 (308)
338 2z63_A TOLL-like receptor 4, v 99.8 2.7E-18 9.4E-23 189.3 13.3 174 83-256 28-212 (570)
339 2z7x_B TOLL-like receptor 1, v 99.8 4.8E-18 1.7E-22 185.2 14.8 150 108-259 248-436 (520)
340 2o6r_A Variable lymphocyte rec 99.7 5E-18 1.7E-22 157.2 12.1 134 69-215 3-138 (177)
341 2z62_A TOLL-like receptor 4, v 99.7 7.3E-18 2.5E-22 167.9 14.1 178 83-260 52-240 (276)
342 4g8a_A TOLL-like receptor 4; l 99.7 7.9E-18 2.7E-22 187.8 14.9 157 89-248 37-198 (635)
343 3a79_B TLR6, VLRB.59, TOLL-lik 99.7 8.8E-18 3E-22 184.9 14.4 110 150-259 350-465 (562)
344 1o6v_A Internalin A; bacterial 99.7 1.2E-17 4.1E-22 179.5 14.5 166 85-258 223-389 (466)
345 1h6t_A Internalin B; cell adhe 99.7 1.8E-17 6.1E-22 166.4 13.7 149 82-238 67-215 (291)
346 2z81_A CD282 antigen, TOLL-lik 99.7 2.2E-17 7.4E-22 181.3 15.2 174 79-257 3-185 (549)
347 1m9s_A Internalin B; cell inva 99.7 1.3E-17 4.3E-22 183.7 12.9 149 82-238 64-212 (605)
348 4ay9_X Follicle-stimulating ho 99.7 1.2E-17 4.1E-22 172.4 11.7 191 70-260 6-218 (350)
349 1jl5_A Outer protein YOPM; leu 99.7 4.4E-17 1.5E-21 174.0 15.4 161 83-258 131-291 (454)
350 4ezg_A Putative uncharacterize 99.7 1.3E-17 4.3E-22 157.4 9.6 152 103-257 40-194 (197)
351 1xeu_A Internalin C; cellular 99.7 1.3E-17 4.3E-22 164.9 9.4 147 83-238 41-187 (263)
352 1m9s_A Internalin B; cell inva 99.7 5.4E-17 1.8E-21 178.6 15.2 170 83-261 43-214 (605)
353 3bz5_A Internalin-J, INLJ; leu 99.7 8E-17 2.7E-21 172.1 16.1 163 83-257 42-204 (457)
354 2wfh_A SLIT homolog 2 protein 99.7 7.1E-17 2.4E-21 151.5 13.7 123 112-236 15-139 (193)
355 2ell_A Acidic leucine-rich nuc 99.7 2.2E-17 7.6E-22 151.4 9.7 131 83-215 24-161 (168)
356 4fmz_A Internalin; leucine ric 99.7 6.2E-17 2.1E-21 166.8 14.1 169 83-259 155-326 (347)
357 2wfh_A SLIT homolog 2 protein 99.7 3.2E-17 1.1E-21 154.0 10.6 125 87-215 14-140 (193)
358 1o6v_A Internalin A; bacterial 99.7 9.1E-17 3.1E-21 172.6 15.4 169 83-259 177-346 (466)
359 2o6r_A Variable lymphocyte rec 99.7 1.1E-16 3.7E-21 148.2 13.5 131 109-240 9-141 (177)
360 2ell_A Acidic leucine-rich nuc 99.7 4.8E-17 1.7E-21 149.1 10.8 134 105-241 22-164 (168)
361 4fmz_A Internalin; leucine ric 99.7 1.2E-16 4.2E-21 164.6 14.9 167 83-257 132-300 (347)
362 3bz5_A Internalin-J, INLJ; leu 99.7 1.7E-16 5.9E-21 169.5 16.2 163 83-259 85-248 (457)
363 2ca6_A RAN GTPase-activating p 99.7 1.2E-18 4.1E-23 182.5 -0.8 178 82-259 93-318 (386)
364 1xeu_A Internalin C; cellular 99.7 1.2E-16 4E-21 157.9 13.5 167 85-260 21-188 (263)
365 2je0_A Acidic leucine-rich nuc 99.7 3.6E-17 1.2E-21 146.8 7.4 125 83-209 17-148 (149)
366 1jl5_A Outer protein YOPM; leu 99.7 2.4E-17 8.1E-22 176.0 7.3 161 83-258 34-209 (454)
367 3g06_A SSPH2 (leucine-rich rep 99.7 6.2E-17 2.1E-21 178.4 10.2 176 59-257 11-194 (622)
368 4gyi_A RIO2 kinase; protein ki 99.7 1.4E-16 4.9E-21 163.0 10.6 140 411-565 96-265 (397)
369 2je0_A Acidic leucine-rich nuc 99.7 1.7E-16 5.8E-21 142.3 8.4 125 105-231 15-148 (149)
370 1dce_A Protein (RAB geranylger 99.6 5.1E-18 1.7E-22 185.7 -3.1 151 84-240 350-550 (567)
371 4b8c_D Glucose-repressible alc 99.6 3.2E-17 1.1E-21 184.9 2.8 153 89-246 207-364 (727)
372 3g39_A Variable lymphocyte rec 99.6 9.1E-16 3.1E-20 140.8 11.9 107 110-217 12-118 (170)
373 3goz_A Leucine-rich repeat-con 99.6 3.3E-17 1.1E-21 169.9 1.6 176 83-258 22-239 (362)
374 3g06_A SSPH2 (leucine-rich rep 99.6 2.8E-15 9.5E-20 165.3 15.6 34 224-258 222-255 (622)
375 2ast_B S-phase kinase-associat 99.6 1.7E-17 5.7E-22 170.2 -2.2 170 84-254 71-257 (336)
376 2ca6_A RAN GTPase-activating p 99.6 5.1E-17 1.8E-21 170.1 1.2 176 83-258 60-288 (386)
377 2r9u_A Variable lymphocyte rec 99.6 2.2E-15 7.6E-20 138.7 12.1 107 110-217 15-121 (174)
378 3goz_A Leucine-rich repeat-con 99.6 1.4E-16 4.8E-21 165.2 3.5 172 87-258 2-210 (362)
379 1a9n_A U2A', U2A'; complex (nu 99.6 7.2E-16 2.5E-20 142.5 7.5 130 103-236 15-153 (176)
380 1a9n_A U2A', U2A'; complex (nu 99.6 2.9E-15 1E-19 138.3 9.4 129 83-215 19-154 (176)
381 2ast_B S-phase kinase-associat 99.6 4.9E-16 1.7E-20 159.3 4.4 172 83-254 93-282 (336)
382 1ds9_A Outer arm dynein; leuci 99.6 2.5E-17 8.5E-22 155.5 -6.6 129 84-217 19-156 (198)
383 3g39_A Variable lymphocyte rec 99.6 1.5E-14 5.3E-19 132.6 11.2 102 87-191 13-116 (170)
384 1dce_A Protein (RAB geranylger 99.5 2.9E-14 1E-18 155.9 12.9 118 108-230 442-567 (567)
385 1ds9_A Outer arm dynein; leuci 99.5 9.8E-17 3.3E-21 151.4 -6.2 134 103-241 14-158 (198)
386 2r9u_A Variable lymphocyte rec 99.5 5.2E-14 1.8E-18 129.5 10.9 106 86-195 15-122 (174)
387 1z7x_W Ribonuclease inhibitor; 99.5 6.8E-16 2.3E-20 165.4 -2.6 175 84-258 200-412 (461)
388 4ay9_X Follicle-stimulating ho 99.5 5.4E-14 1.9E-18 144.9 11.1 173 82-255 53-234 (350)
389 1z7x_W Ribonuclease inhibitor; 99.5 1.6E-15 5.5E-20 162.5 -1.7 174 84-257 86-297 (461)
390 2ifg_A High affinity nerve gro 99.4 3.4E-13 1.2E-17 138.8 9.5 112 70-215 4-117 (347)
391 2ifg_A High affinity nerve gro 99.4 9.8E-13 3.3E-17 135.3 10.3 126 133-260 12-144 (347)
392 3un9_A NLR family member X1; l 99.3 3.6E-14 1.2E-18 147.0 -4.0 163 83-245 72-261 (372)
393 3tm0_A Aminoglycoside 3'-phosp 99.2 1.8E-11 6.3E-16 120.4 10.0 144 409-564 13-213 (263)
394 3un9_A NLR family member X1; l 99.2 1.4E-12 4.7E-17 135.0 -2.8 155 83-237 101-284 (372)
395 3sb4_A Hypothetical leucine ri 99.2 6.2E-11 2.1E-15 120.8 9.4 164 83-249 101-323 (329)
396 1nd4_A Aminoglycoside 3'-phosp 99.1 4E-11 1.4E-15 117.7 7.5 138 411-565 21-215 (264)
397 3ogk_B Coronatine-insensitive 99.0 8.7E-12 3E-16 137.8 -3.2 175 83-258 293-527 (592)
398 3dxp_A Putative acyl-COA dehyd 99.0 7.4E-10 2.5E-14 114.2 11.0 143 415-565 43-249 (359)
399 3sb4_A Hypothetical leucine ri 99.0 7.2E-10 2.5E-14 112.9 10.1 146 83-230 124-328 (329)
400 3ogk_B Coronatine-insensitive 99.0 1.7E-10 5.7E-15 127.5 4.2 102 84-186 139-252 (592)
401 3sg8_A APH(2'')-ID; antibiotic 99.0 2.9E-10 1E-14 114.4 4.9 186 415-616 25-287 (304)
402 3rw6_A Nuclear RNA export fact 98.9 1.1E-11 3.8E-16 120.8 -8.3 116 74-191 79-210 (267)
403 2p1m_B Transport inhibitor res 98.9 2.4E-10 8.3E-15 126.2 -0.2 171 83-256 289-493 (594)
404 2p1m_B Transport inhibitor res 98.8 7.7E-11 2.6E-15 130.2 -4.9 172 83-256 314-518 (594)
405 2ra8_A Uncharacterized protein 98.7 4.9E-09 1.7E-13 107.5 3.8 161 83-244 139-328 (362)
406 2ra8_A Uncharacterized protein 98.6 2.2E-08 7.7E-13 102.6 6.0 172 83-257 107-320 (362)
407 1io0_A Tropomodulin; LRR prote 98.6 1.5E-09 5.1E-14 100.5 -2.5 93 98-190 27-136 (185)
408 4fdw_A Leucine rich hypothetic 98.6 2E-07 6.9E-12 97.1 12.4 167 83-256 180-357 (401)
409 3r70_A Aminoglycoside phosphot 98.6 1.9E-07 6.5E-12 94.4 11.7 138 411-566 38-239 (320)
410 4fdw_A Leucine rich hypothetic 98.6 2.2E-07 7.5E-12 96.9 12.2 163 84-252 158-331 (401)
411 1io0_A Tropomodulin; LRR prote 98.5 1.5E-08 5.2E-13 93.7 1.2 109 82-190 35-164 (185)
412 3rw6_A Nuclear RNA export fact 98.5 6.5E-08 2.2E-12 94.1 4.9 102 103-207 137-257 (267)
413 3tdw_A Gentamicin resistance p 98.4 2.6E-06 9E-11 85.4 12.8 138 415-566 24-226 (306)
414 4gkh_A Aminoglycoside 3'-phosp 98.3 3.3E-06 1.1E-10 82.9 11.6 136 417-565 31-224 (272)
415 3ovc_A Hygromycin-B 4-O-kinase 98.3 3.5E-06 1.2E-10 86.5 11.0 75 414-496 45-122 (362)
416 3d1u_A Putative fructosamine-3 98.2 2.8E-06 9.5E-11 84.2 9.6 76 414-495 19-97 (288)
417 3ats_A Putative uncharacterize 98.0 3.7E-05 1.3E-09 78.7 13.6 83 415-497 25-122 (357)
418 2q83_A YTAA protein; 2635576, 98.0 6.6E-05 2.3E-09 76.1 14.4 143 416-565 38-253 (346)
419 2pyw_A Uncharacterized protein 97.8 2.6E-05 8.9E-10 81.8 7.3 78 534-612 232-312 (420)
420 3e4g_A ATP synthase subunit S, 97.8 8.4E-06 2.9E-10 73.5 2.3 83 130-212 62-150 (176)
421 3jr1_A Putative fructosamine-3 97.7 0.00017 6E-09 71.9 12.1 140 414-560 40-232 (312)
422 2olc_A MTR kinase, methylthior 97.7 8.7E-05 3E-09 77.1 9.3 77 415-493 35-120 (397)
423 1pgv_A TMD-1, tropomodulin TMD 97.6 3.5E-06 1.2E-10 77.5 -2.0 67 100-166 34-111 (197)
424 3f7w_A Putative fructosamine-3 97.6 0.00017 6E-09 71.2 9.8 78 412-495 17-97 (288)
425 3rfe_A Platelet glycoprotein I 97.6 9.7E-05 3.3E-09 63.4 6.5 56 111-166 12-68 (130)
426 1pgv_A TMD-1, tropomodulin TMD 97.5 2.5E-05 8.4E-10 71.9 1.8 110 81-190 39-170 (197)
427 3e4g_A ATP synthase subunit S, 97.4 6.2E-05 2.1E-09 67.8 3.3 37 84-120 62-99 (176)
428 4gt6_A Cell surface protein; l 97.4 0.00042 1.4E-08 71.8 9.7 131 100-235 258-390 (394)
429 4h09_A Hypothetical leucine ri 97.1 0.0018 6E-08 66.6 10.8 109 100-211 210-320 (379)
430 2ppq_A HSK, HK, homoserine kin 97.1 0.0097 3.3E-07 59.4 15.9 145 415-564 27-217 (322)
431 3dxq_A Choline/ethanolamine ki 97.1 0.001 3.6E-08 66.0 7.9 30 535-565 174-203 (301)
432 1zyl_A Hypothetical protein YI 97.0 0.0054 1.8E-07 61.5 13.2 143 417-565 33-224 (328)
433 3rfe_A Platelet glycoprotein I 97.0 0.00074 2.5E-08 57.8 5.8 37 178-214 32-68 (130)
434 3csv_A Aminoglycoside phosphot 97.0 0.0028 9.6E-08 63.8 11.0 33 534-566 183-219 (333)
435 4fs7_A Uncharacterized protein 97.0 0.0026 8.8E-08 65.8 10.8 142 84-233 231-376 (394)
436 4fs7_A Uncharacterized protein 96.9 0.0032 1.1E-07 65.1 10.7 54 83-138 71-126 (394)
437 4gt6_A Cell surface protein; l 96.8 0.0021 7.3E-08 66.4 8.2 124 84-214 266-391 (394)
438 1nw1_A Choline kinase (49.2 KD 96.7 0.0032 1.1E-07 65.9 8.7 73 415-495 78-159 (429)
439 3feg_A Choline/ethanolamine ki 96.6 0.0059 2E-07 62.5 9.5 142 416-564 56-254 (379)
440 3i1a_A Spectinomycin phosphotr 96.5 0.011 3.8E-07 59.6 10.7 32 534-565 206-237 (339)
441 2qg7_A Ethanolamine kinase PV0 96.5 0.011 3.7E-07 62.2 10.8 74 415-495 113-188 (458)
442 4h09_A Hypothetical leucine ri 96.4 0.015 5.1E-07 59.5 11.3 129 102-233 189-320 (379)
443 3c5i_A Choline kinase; choline 96.1 0.015 5.3E-07 59.3 9.5 73 416-495 39-121 (369)
444 2k1k_A Ephrin type-A receptor 95.6 0.0092 3.2E-07 38.2 3.0 31 299-329 7-37 (38)
445 3f2s_A CK, chetk-alpha, cholin 95.0 0.05 1.7E-06 55.9 8.0 144 416-563 58-279 (401)
446 2l2t_A Receptor tyrosine-prote 94.9 0.035 1.2E-06 36.6 4.2 30 304-333 11-40 (44)
447 2ks1_B Epidermal growth factor 94.9 0.056 1.9E-06 35.7 5.1 29 304-332 12-40 (44)
448 3mes_A Choline kinase; malaria 93.9 0.14 4.8E-06 53.0 8.7 74 415-495 75-157 (424)
449 2jwa_A Receptor tyrosine-prote 93.5 0.094 3.2E-06 34.5 3.9 27 303-330 12-38 (44)
450 2yle_A Protein spire homolog 1 93.0 0.25 8.5E-06 45.6 7.5 99 493-611 33-131 (229)
451 4ann_A ESSB; membrane protein, 92.2 0.21 7E-06 46.1 6.1 87 466-565 43-129 (215)
452 3g15_A CK, chetk-alpha, cholin 89.9 0.12 4.1E-06 53.3 2.3 29 536-564 246-280 (401)
453 4ano_A ESSB; membrane protein, 88.5 1 3.6E-05 41.5 7.3 85 466-565 48-134 (219)
454 3cxl_A N-chimerin; SH2, RHO-GA 84.5 0.14 4.9E-06 53.7 -0.9 62 415-479 147-215 (463)
455 2klu_A T-cell surface glycopro 76.0 4.3 0.00015 28.8 4.5 27 308-334 12-39 (70)
456 2l34_A TYRO protein tyrosine k 72.8 2.2 7.5E-05 26.1 2.1 26 301-326 5-30 (33)
457 1afo_A Glycophorin A; integral 63.4 8.5 0.00029 24.1 3.4 29 304-332 11-39 (40)
458 2k9y_A Ephrin type-A receptor 57.9 7.6 0.00026 25.0 2.7 16 305-320 12-27 (41)
459 1iij_A ERBB-2 receptor protein 57.5 2.5 8.5E-05 26.2 0.3 7 305-311 10-16 (35)
460 2l8s_A Integrin alpha-1; trans 54.3 18 0.00063 24.8 4.1 24 301-324 8-31 (54)
461 2x6h_A GH13170P, VPS34, phosph 51.7 1.1E+02 0.0038 33.2 12.1 45 512-563 529-575 (696)
462 3ls8_A Phosphatidylinositol 3- 50.4 2.1E+02 0.007 30.6 13.7 46 511-563 454-501 (614)
463 2knc_A Integrin alpha-IIB; tra 46.8 20 0.0007 24.6 3.5 25 300-324 10-34 (54)
464 2klu_A T-cell surface glycopro 45.1 10 0.00036 26.9 1.8 33 304-336 12-44 (70)
465 2k1a_A Integrin alpha-IIB; sin 44.1 19 0.00064 23.4 2.8 25 300-324 8-32 (42)
466 2jwa_A Receptor tyrosine-prote 43.8 29 0.001 22.7 3.7 25 309-333 14-38 (44)
467 2lz0_A Uncharacterized protein 42.9 32 0.0011 27.0 4.8 45 165-210 8-52 (100)
468 2lz0_A Uncharacterized protein 41.7 61 0.0021 25.3 6.3 48 140-188 7-54 (100)
469 2l2t_A Receptor tyrosine-prote 30.7 72 0.0025 20.8 4.0 28 308-335 12-39 (44)
470 2jp3_A FXYD domain-containing 30.5 33 0.0011 24.5 2.5 20 304-323 18-37 (67)
471 2ks1_B Epidermal growth factor 29.7 83 0.0028 20.6 4.2 7 322-328 33-39 (44)
472 1cja_A Protein (actin-fragmin 28.6 4.2E+02 0.014 25.8 12.6 144 412-566 71-239 (342)
473 2jo1_A Phospholemman; FXYD1, N 28.1 64 0.0022 23.2 3.6 21 304-324 17-37 (72)
474 2llm_A Amyloid beta A4 protein 33.6 13 0.00044 24.0 0.0 24 302-325 16-39 (43)
475 2knc_B Integrin beta-3; transm 25.0 83 0.0028 23.5 4.1 16 304-319 9-24 (79)
No 1
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.3e-48 Score=398.35 Aligned_cols=202 Identities=25% Similarity=0.430 Sum_probs=177.2
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
++|+..+.||+|+||.||+|++. +|+.||||++..........+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 57999999999999999999875 59999999998776666677889999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
||++|+|.++++.. ....+++.+++.++.||+.||+|||++ +||||||||+|||+++++.+||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~--~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQ--KGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp CCTTCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred CCCCCcHHHHHHHc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 99999999999632 345678999999999999999999999 9999999999999999999999999999876432
Q ss_pred CccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.......+||+.|||||++.+..|+.++|||||||++|||+||+.||.
T Consensus 179 -~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~ 226 (350)
T 4b9d_A 179 -VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFE 226 (350)
T ss_dssp -HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred -cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 223345689999999999999999999999999999999999999996
No 2
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=5.6e-48 Score=388.13 Aligned_cols=203 Identities=29% Similarity=0.484 Sum_probs=173.9
Q ss_pred hhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
+...+++...+.||+|+||+||+|++. ..||||+++......+..+.|.+|++++++++|||||+++|++.+ +..++
T Consensus 32 ei~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~i 108 (307)
T 3omv_A 32 EIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAI 108 (307)
T ss_dssp BCCTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred EEcHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEE
Confidence 445677888999999999999999875 358999998766666777899999999999999999999998864 56899
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
|||||++|+|.++++. ....+++.++..|+.||++||+|||++ +||||||||+|||+++++.+||+|||+|+..
T Consensus 109 VmEy~~gGsL~~~l~~---~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 182 (307)
T 3omv_A 109 VTQWCEGSSLYKHLHV---QETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp EEECCSSCBHHHHHHT---SCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-
T ss_pred EEEcCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceec
Confidence 9999999999999963 345799999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCC-ccccccccccccccCcccccc---CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTE-RQVSTQMVGAFGYSAPEFALS---GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~-~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... .......+||+.|||||++.+ ..|+.++|||||||++|||+||+.||.
T Consensus 183 ~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~ 238 (307)
T 3omv_A 183 SRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYS 238 (307)
T ss_dssp -----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred ccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCC
Confidence 4332 223345689999999999964 458999999999999999999999996
No 3
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.4e-48 Score=389.81 Aligned_cols=201 Identities=24% Similarity=0.379 Sum_probs=180.5
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
++|+..+.||+|+||+||+|+.. +|+.||+|++.+... .....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 56999999999999999999875 589999999975432 2223567899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++|+|.++++. .+.+++.++..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+|+....
T Consensus 112 Ey~~gG~L~~~i~~----~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 112 SYAKNGELLKYIRK----IGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp CCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 99999999999973 45799999999999999999999999 999999999999999999999999999987653
Q ss_pred CC-ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TE-RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. .......+||+.|||||++.+..|+.++||||+||++|||+||+.||.
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~ 235 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 235 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 32 333456799999999999999999999999999999999999999996
No 4
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=6e-48 Score=387.91 Aligned_cols=205 Identities=27% Similarity=0.481 Sum_probs=178.2
Q ss_pred hcCCcccceeccCccceEEEEEEc------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCe
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (618)
.++|...+.||+|+||.||+|++. +++.||||+++.. .....++|.+|++++++++|||||+++|+|.+.+.
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 89 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 89 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC--ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence 457888899999999999999864 4788999999754 34567789999999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhccc---------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCC
Q 007107 483 RLLVYEYVGNGNLHDMLHFAD---------DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN 553 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~ 553 (618)
.++|||||++|+|.++++... .....+++.++..++.||++||+|||++ +||||||||+|||+++++.
T Consensus 90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~ 166 (299)
T 4asz_A 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLL 166 (299)
T ss_dssp EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCc
Confidence 999999999999999997532 2345799999999999999999999999 9999999999999999999
Q ss_pred cEEeeccccccCCCCCcc-ccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCCC
Q 007107 554 PHLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDR 618 (618)
Q Consensus 554 ~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~~ 618 (618)
+||+|||+|+........ ......||++|||||++.+..|+.++|||||||++|||+| |+.||..
T Consensus 167 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~ 233 (299)
T 4asz_A 167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQ 233 (299)
T ss_dssp EEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred EEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 999999999865433322 2334579999999999999999999999999999999999 9999963
No 5
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1e-47 Score=391.08 Aligned_cols=198 Identities=28% Similarity=0.420 Sum_probs=178.3
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
...|+..+.||+|+||.||+|.+. +|+.||||++...... ..+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS--SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh--HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 356888999999999999999876 5999999999654322 3456889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
|||++|+|.++++. ..+++.++..++.||+.||+|||++ +||||||||+|||++.++++||+|||+|+....
T Consensus 151 Ey~~gg~L~~~l~~-----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 151 EFLEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 222 (346)
T ss_dssp CCCTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred eCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence 99999999999962 4689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. ......+||+.|||||++.+..|+.++|||||||++|||++|+.||.
T Consensus 223 ~~-~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~ 271 (346)
T 4fih_A 223 EV-PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF 271 (346)
T ss_dssp SS-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred CC-CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 32 23345789999999999999999999999999999999999999996
No 6
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4.4e-47 Score=378.85 Aligned_cols=196 Identities=27% Similarity=0.415 Sum_probs=171.9
Q ss_pred cccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee----CCeEEEEE
Q 007107 413 SQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE----HGQRLLVY 487 (618)
Q Consensus 413 ~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 487 (618)
...+.||+|+||.||+|.+. +++.||+|++..........+.|.+|++++++++|||||++++++.+ .+..++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 55668999999999999876 48899999998776666677889999999999999999999999865 34689999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeec-CCCCcEEeeccccccCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD-DELNPHLSDCGLAALTP 566 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~-~~~~~kl~Dfgl~~~~~ 566 (618)
|||++|+|.++++. ...+++..+..++.||+.||+|||++. ++||||||||+|||++ +++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 99999999999973 457899999999999999999999981 1399999999999998 47899999999998654
Q ss_pred CCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. ......+||+.|||||++.+ .|+.++|||||||++|||+||+.||.
T Consensus 184 ~---~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~ 230 (290)
T 3fpq_A 184 A---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYS 230 (290)
T ss_dssp T---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred C---CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 3 23345789999999998865 69999999999999999999999995
No 7
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=4.5e-47 Score=386.84 Aligned_cols=205 Identities=29% Similarity=0.488 Sum_probs=172.4
Q ss_pred hcCCcccceeccCccceEEEEEEc------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCe
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (618)
.++|...+.||+|+||.||+|++. +++.||||+++.. .....++|.+|++++++++|||||+++|+|.+.+.
T Consensus 40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 117 (329)
T 4aoj_A 40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRP 117 (329)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence 356778889999999999999875 4789999999754 34567789999999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhcccC-----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC
Q 007107 483 RLLVYEYVGNGNLHDMLHFADD-----------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~ 551 (618)
.++|||||++|+|.++++.... ...++++.++..|+.||++||+|||++ +||||||||+|||++++
T Consensus 118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~ 194 (329)
T 4aoj_A 118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQG 194 (329)
T ss_dssp EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETT
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCC
Confidence 9999999999999999975332 235699999999999999999999999 99999999999999999
Q ss_pred CCcEEeeccccccCCCCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCCC
Q 007107 552 LNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDR 618 (618)
Q Consensus 552 ~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~~ 618 (618)
+.+||+|||+++....... .......||++|||||++.+..|+.++|||||||++|||+| |+.||..
T Consensus 195 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~ 263 (329)
T 4aoj_A 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ 263 (329)
T ss_dssp TEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred CcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCC
Confidence 9999999999987644332 23345689999999999999999999999999999999999 9999963
No 8
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.8e-47 Score=386.14 Aligned_cols=205 Identities=26% Similarity=0.455 Sum_probs=176.5
Q ss_pred cCCcccceeccCccceEEEEEEc------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
.+++..+.||+|+||.||+|.+. +++.||||+++... .....++|.+|+.++++++|||||+++|+|.+++..
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~ 104 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL 104 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE
Confidence 34566778999999999999863 46889999997553 333457899999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhcccC------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC
Q 007107 484 LLVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~ 551 (618)
++|||||++|+|.++++.... ....+++.++.+|+.||++||+|||++ +||||||||+|||++++
T Consensus 105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~ 181 (308)
T 4gt4_A 105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDK 181 (308)
T ss_dssp EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCC
Confidence 999999999999999964321 124689999999999999999999999 99999999999999999
Q ss_pred CCcEEeeccccccCCCCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCCC
Q 007107 552 LNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLDR 618 (618)
Q Consensus 552 ~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~~ 618 (618)
+.+||+|||+++....... .......||++|||||++.+..|+.++|||||||++|||+| |+.||..
T Consensus 182 ~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~ 250 (308)
T 4gt4_A 182 LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG 250 (308)
T ss_dssp GCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred CCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCC
Confidence 9999999999986543322 23345689999999999999999999999999999999999 8999963
No 9
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=5.4e-48 Score=387.31 Aligned_cols=200 Identities=28% Similarity=0.412 Sum_probs=171.8
Q ss_pred cCCcccceeccCccceEEEEEEc----CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
++|+..+.||+|+||+||+|+.. .++.||+|+++...........+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999763 37889999997655443344568889999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+++|+|.++++. .+.+++.++..++.||+.||+|||++ +|+||||||+|||+++++++||+|||+|+..
T Consensus 104 vmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EECCCTTCEEHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEcCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 9999999999999973 45799999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... ......+||+.|||||++.+..|+.++||||+||++|||+||+.||.
T Consensus 177 ~~~~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~ 227 (304)
T 3ubd_A 177 IDHE-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227 (304)
T ss_dssp -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCCC-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCC
Confidence 4332 23345789999999999999999999999999999999999999996
No 10
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1e-46 Score=393.12 Aligned_cols=198 Identities=28% Similarity=0.420 Sum_probs=178.6
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.+.|+..+.||+|+||.||+|.+. +|+.||||++...... ..+.+.+|+++|++++|||||++++++.+.+..|+||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS--SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh--HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 467999999999999999999876 5999999999654322 3456889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
|||++|+|.++++. ..+++..+..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+....
T Consensus 228 Ey~~gG~L~~~i~~-----~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 228 EFLEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp ECCTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred eCCCCCcHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence 99999999999962 4689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. ......+||+.|||||++.+..|+.++|||||||++|||++|+.||.
T Consensus 300 ~~-~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~ 348 (423)
T 4fie_A 300 EV-PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF 348 (423)
T ss_dssp SC-CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred CC-ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 32 23456789999999999999999999999999999999999999996
No 11
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=8e-47 Score=383.37 Aligned_cols=196 Identities=25% Similarity=0.318 Sum_probs=171.0
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.+.|...+.||+|+||.||+|++. +|+.||||+++.... ..+|+.++++++|||||++++++.+.+..|+||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivm 129 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFM 129 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 345778889999999999999876 589999999975432 246899999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCC-CcEEeeccccccCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL-NPHLSDCGLAALTP 566 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~-~~kl~Dfgl~~~~~ 566 (618)
|||++|+|.++++. .+.+++..+..++.||+.||+|||++ +||||||||+|||++.+| ++||+|||+|+...
T Consensus 130 Ey~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~ 202 (336)
T 4g3f_A 130 ELLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 202 (336)
T ss_dssp CCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-
T ss_pred eccCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEcc
Confidence 99999999999973 35799999999999999999999999 999999999999999887 69999999998765
Q ss_pred CCCcc----ccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCCC
Q 007107 567 NTERQ----VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 567 ~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
..... .....+||+.|||||++.+..|+.++|||||||++|||+||+.||..
T Consensus 203 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~ 258 (336)
T 4g3f_A 203 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 258 (336)
T ss_dssp -----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred CCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCC
Confidence 33211 12345899999999999999999999999999999999999999963
No 12
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.8e-46 Score=371.08 Aligned_cols=199 Identities=29% Similarity=0.486 Sum_probs=162.6
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCccccc-HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
++|+..+.||+|+||+||+|... +|+.||+|++...... ......+.+|++++++++|||||++++++.+++..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 57999999999999999999875 5999999999755432 223567899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+ +|+|.+++. ..+.+++.++..++.||+.||+|||++ +|+||||||+|||+++++++||+|||+|+....
T Consensus 93 Ey~-~g~L~~~l~----~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 93 EYA-GNELFDYIV----QRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHH----HSCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred eCC-CCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 999 679999886 346799999999999999999999999 999999999999999999999999999986643
Q ss_pred CCccccccccccccccCccccccCCc-cccchhhhHHHHHHHHHhCCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
. ......+||+.|||||++.+..| +.++||||+||++|||+||+.||+.
T Consensus 165 ~--~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~ 214 (275)
T 3hyh_A 165 G--NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214 (275)
T ss_dssp ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred C--CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC
Confidence 2 22345789999999999998886 5799999999999999999999963
No 13
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.2e-45 Score=377.37 Aligned_cols=212 Identities=25% Similarity=0.423 Sum_probs=182.1
Q ss_pred hhhhhhhhcCCcccceeccCccceEEEEEEcC------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCC-Ccccccc
Q 007107 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH-PNIVTLA 474 (618)
Q Consensus 402 ~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~ 474 (618)
...++...++|+..+.||+|+||.||+|.+.. ++.||||+++... .....+.|.+|++++.+++| ||||+++
T Consensus 56 ~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 56 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-ChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 33455667889999999999999999998653 3689999997654 33456789999999999975 8999999
Q ss_pred eEEeeC-CeEEEEEEecCCCChhhhhhcccC------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCC
Q 007107 475 GYCAEH-GQRLLVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNF 541 (618)
Q Consensus 475 ~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dl 541 (618)
|+|.+. +..++|||||++|+|.++++..+. ....+++.++..++.||++||+|||++ +||||||
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDL 211 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 211 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCcc
Confidence 999765 568999999999999999975322 134589999999999999999999999 9999999
Q ss_pred CCCCeeecCCCCcEEeeccccccCCCCCcc-ccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 542 KSANILLDDELNPHLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 542 kp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
||+|||+++++.+||+|||+|+........ ......||+.|||||++.+..|+.++|||||||++|||+| |+.||.
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~ 289 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 289 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred CccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCC
Confidence 999999999999999999999876544332 3345689999999999999999999999999999999998 999996
No 14
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.1e-45 Score=368.41 Aligned_cols=198 Identities=27% Similarity=0.371 Sum_probs=163.8
Q ss_pred cCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC----eEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG----QRLL 485 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~l 485 (618)
++|...+.||+|+||.||+|++ +|+.||||++.... .....+..|+..+.+++|||||++++++.+++ ..++
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence 4677888999999999999998 58999999996432 22233345677777899999999999998754 5799
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhc-----CCCCceecCCCCCCeeecCCCCcEEeecc
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV-----CLPSVVHRNFKSANILLDDELNPHLSDCG 560 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-----~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfg 560 (618)
|||||++|+|.++++. ..+++..+.+++.|+++||+|||++ +.++||||||||+|||+++++++||+|||
T Consensus 79 V~Ey~~~gsL~~~l~~-----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG 153 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EEECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred EecCCCCCcHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence 9999999999999963 4689999999999999999999975 23589999999999999999999999999
Q ss_pred ccccCCCCCcc---ccccccccccccCccccccC------CccccchhhhHHHHHHHHHhCCCCC
Q 007107 561 LAALTPNTERQ---VSTQMVGAFGYSAPEFALSG------IYTVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 561 l~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlG~il~elltg~~Pf 616 (618)
+++........ .....+||+.|||||++.+. .|+.++|||||||++|||+||+.||
T Consensus 154 la~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~ 218 (303)
T 3hmm_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG 218 (303)
T ss_dssp TCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBT
T ss_pred CCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCC
Confidence 99866443322 22346899999999999764 4788999999999999999998766
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.5e-44 Score=363.75 Aligned_cols=200 Identities=25% Similarity=0.393 Sum_probs=161.9
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC-------
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG------- 481 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------- 481 (618)
++|+..+.||+|+||.||+|++. +|+.||||+++... .....+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 46889999999999999999875 68999999987543 3345678999999999999999999999987654
Q ss_pred -----eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEE
Q 007107 482 -----QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHL 556 (618)
Q Consensus 482 -----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl 556 (618)
..|+||||+++|+|.++++... .....++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl 159 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKV 159 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCC-SGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcC-CCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEE
Confidence 3689999999999999997322 123456677889999999999999999 9999999999999999999999
Q ss_pred eeccccccCCCCCcc-----------ccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 557 SDCGLAALTPNTERQ-----------VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 557 ~Dfgl~~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+|||+|+........ ..+..+||+.|||||++.+..|+.++|||||||++|||++ ||.
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~ 228 (299)
T 4g31_A 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFS 228 (299)
T ss_dssp CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCS
T ss_pred ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCC
Confidence 999999876433211 1234689999999999999999999999999999999996 774
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-43 Score=369.59 Aligned_cols=201 Identities=27% Similarity=0.413 Sum_probs=175.9
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee------CC
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE------HG 481 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~ 481 (618)
.++|+..+.||+|+||.||+|.+. +|+.||||+++.........+.+.+|+++|++++|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 357999999999999999999875 69999999998766666667889999999999999999999998764 35
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccc
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl 561 (618)
..|+|||||+ |+|.+++. ..+.+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+
T Consensus 133 ~~~ivmE~~~-g~L~~~i~----~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIH----SSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CEEEEEECCS-EEHHHHHT----SSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEEeCCC-CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecce
Confidence 7899999996 68999886 456899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCC---CccccccccccccccCccccccCC-ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNT---ERQVSTQMVGAFGYSAPEFALSGI-YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|+..... ........+||+.|||||++.+.. |+.++||||+||++|||++|+.||.
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~ 264 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFP 264 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSC
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCC
Confidence 9866432 122344579999999999988754 6999999999999999999999995
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.6e-42 Score=358.55 Aligned_cols=199 Identities=26% Similarity=0.379 Sum_probs=170.4
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEc----CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEee
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAE 479 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 479 (618)
++...++|+..+.||+|+||+||+|+.+ .++.||+|++.... ...++.+|+++++.+ +||||+++++++.+
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~ 91 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----HPIRIAAELQCLTVAGGQDNVMGVKYCFRK 91 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc----CHHHHHHHHHHHHHhcCCCCCceEEEEEEE
Confidence 3445678999999999999999999753 46889999986543 245678899999888 69999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC-CCcEEee
Q 007107 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE-LNPHLSD 558 (618)
Q Consensus 480 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~-~~~kl~D 558 (618)
.+..++||||+++|+|.++++ .+++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|
T Consensus 92 ~~~~~lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~D 161 (361)
T 4f9c_A 92 NDHVVIAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVD 161 (361)
T ss_dssp TTEEEEEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECC
T ss_pred CCEEEEEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECc
Confidence 999999999999999999884 488999999999999999999999 99999999999999876 7999999
Q ss_pred ccccccCCCCCc---------------------------cccccccccccccCccccccC-CccccchhhhHHHHHHHHH
Q 007107 559 CGLAALTPNTER---------------------------QVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELL 610 (618)
Q Consensus 559 fgl~~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~ell 610 (618)
||+|+....... ......+||+.|||||++.+. .|+.++||||+||++|||+
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell 241 (361)
T 4f9c_A 162 FGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLL 241 (361)
T ss_dssp CTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHH
Confidence 999975533211 112345799999999999875 4899999999999999999
Q ss_pred hCCCCCC
Q 007107 611 TGRKPLD 617 (618)
Q Consensus 611 tg~~Pf~ 617 (618)
||+.||.
T Consensus 242 ~G~~Pf~ 248 (361)
T 4f9c_A 242 SGRYPFY 248 (361)
T ss_dssp HTCSSSS
T ss_pred HCCCCCC
Confidence 9999994
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.5e-42 Score=377.48 Aligned_cols=199 Identities=30% Similarity=0.391 Sum_probs=173.2
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccH----HHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL----QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
.++|+..+.||+|+||.||+|+.. +|+.||+|++.+..... ......+.++++++.++|||||++++++.+.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 467999999999999999999876 59999999997543211 1122234456778888999999999999999999
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
|+||||++||+|.++++. .+.+++..+..++.||+.||+|||++ +||||||||+|||++.+|++||+|||+|+
T Consensus 268 ylVmEy~~GGdL~~~l~~----~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQ----HGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEEECCCCSCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceee
Confidence 999999999999999973 46799999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
...... ....+||+.|||||++.+ ..|+.++||||+||++|||++|+.||.
T Consensus 341 ~~~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~ 392 (689)
T 3v5w_A 341 DFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR 392 (689)
T ss_dssp ECSSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred ecCCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 764332 235689999999999975 579999999999999999999999995
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=5.3e-41 Score=367.87 Aligned_cols=199 Identities=24% Similarity=0.380 Sum_probs=178.4
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.++|++.+.||+|+||.||+|..+ +|+.||+|++.... ....+.+.+|+++|+.++|||||++++++.+.+..++||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~ 233 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 233 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc--hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 367999999999999999999876 59999999987543 334677889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC--CCcEEeeccccccC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE--LNPHLSDCGLAALT 565 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~--~~~kl~Dfgl~~~~ 565 (618)
|||++|+|.+++.. ....+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+++..
T Consensus 234 E~~~gg~L~~~i~~---~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~ 307 (573)
T 3uto_A 234 EFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 307 (573)
T ss_dssp ECCCCCBHHHHHTC---TTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred eecCCCcHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence 99999999998852 345799999999999999999999999 99999999999999854 89999999999887
Q ss_pred CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||.
T Consensus 308 ~~~~--~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~ 357 (573)
T 3uto_A 308 DPKQ--SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG 357 (573)
T ss_dssp CTTS--EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSC
T ss_pred cCCC--ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 5432 2345689999999999999999999999999999999999999996
No 20
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2e-39 Score=333.02 Aligned_cols=219 Identities=38% Similarity=0.721 Sum_probs=194.4
Q ss_pred ceeehhhhhhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEE
Q 007107 398 TSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477 (618)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 477 (618)
..++..++....++|...+.||+|+||.||+|...+|+.||+|++...... .....+.+|++++++++||||+++++++
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc-hHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 457788899999999999999999999999999888999999999754322 1233688999999999999999999999
Q ss_pred eeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEe
Q 007107 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLS 557 (618)
Q Consensus 478 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~ 557 (618)
...+..++||||+++|+|.++++........+++..+..++.|++.||+|||+.+.++|+||||||+|||+++++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 99999999999999999999998665556679999999999999999999999866689999999999999999999999
Q ss_pred eccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 558 DCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 558 Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|||+++..............||+.|+|||++.+..++.++||||||+++|||++|+.||+
T Consensus 177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 236 (326)
T 3uim_A 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236 (326)
T ss_dssp CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccc
Confidence 999998776555544555679999999999999999999999999999999999999995
No 21
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.5e-39 Score=345.18 Aligned_cols=210 Identities=26% Similarity=0.329 Sum_probs=182.3
Q ss_pred hhhhhhhhcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCccccc-HHHHHHHHHHHHHhhcCCCCcccccceEEee
Q 007107 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479 (618)
Q Consensus 402 ~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 479 (618)
..++....++|+..+.||+|+||.||+|++.+ ++.||+|+++..... ......+.+|..++..++||||+++++++.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 34455667889999999999999999998875 789999998643211 1122347889999999999999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeec
Q 007107 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (618)
Q Consensus 480 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Df 559 (618)
.+..++||||+++|+|.++++. ....+++..++.++.||+.||+|||+. +|+||||||+|||++.++++||+||
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~---~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSK---FEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEecCCCCcHHHHHHH---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcch
Confidence 9999999999999999999973 246799999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccccCccccc-----cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 560 GLAALTPNTERQVSTQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 560 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|+++.............+||+.|+|||++. ...|+.++|||||||++|||++|+.||.
T Consensus 220 Gla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~ 282 (437)
T 4aw2_A 220 GSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFY 282 (437)
T ss_dssp TTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred hhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCC
Confidence 999876554444445578999999999997 5678999999999999999999999996
No 22
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=4.6e-39 Score=329.97 Aligned_cols=201 Identities=28% Similarity=0.434 Sum_probs=181.0
Q ss_pred hhcCCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
..++|...+.||+|+||.||+|.+ .+|+.||+|++..........+.+.+|+++++.++||||+++++++...+..++|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 456799999999999999999987 4799999999987666666778899999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+++|+|.+++.. .+.+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 93 ~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 93 MEYASGGEVFDYLVA----HGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp ECCCTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred EECCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 999999999999863 35689999999999999999999999 99999999999999999999999999997664
Q ss_pred CCCccccccccccccccCccccccCCcc-ccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYT-VKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... .....+||+.|+|||++.+..+. .++||||+||++|||++|+.||+
T Consensus 166 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 215 (328)
T 3fe3_A 166 VGG--KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215 (328)
T ss_dssp SSC--GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CCC--ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCC
Confidence 332 23456899999999999988875 79999999999999999999996
No 23
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5e-39 Score=331.68 Aligned_cols=205 Identities=25% Similarity=0.404 Sum_probs=171.0
Q ss_pred hhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
+...++|+..+.||+|+||.||+|.+. +|+.||+|++...... .....+.+|++++++++||||+++++++...+..+
T Consensus 6 ~~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~ 84 (347)
T 3zgw_A 6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG-SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIF 84 (347)
T ss_dssp TTTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc-hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEE
Confidence 445678999999999999999999864 6899999998755432 23456889999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||++..
T Consensus 85 lv~E~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~ 157 (347)
T 3zgw_A 85 MVLEYCPGGELFDYIIS----QDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAK 157 (347)
T ss_dssp EEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCccc
Confidence 99999999999999863 35689999999999999999999999 999999999999999999999999999976
Q ss_pred CCCCCccccccccccccccCccccccCCc-cccchhhhHHHHHHHHHhCCCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
............+||+.|+|||++.+..+ +.++||||+||++|||++|+.||+.
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~ 212 (347)
T 3zgw_A 158 PKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD 212 (347)
T ss_dssp --------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 65443334455689999999999998876 8899999999999999999999963
No 24
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.8e-39 Score=341.97 Aligned_cols=207 Identities=23% Similarity=0.325 Sum_probs=180.2
Q ss_pred hhhhhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeC
Q 007107 403 ASLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH 480 (618)
Q Consensus 403 ~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 480 (618)
..+....++|...+.||+|+||.||+|+.. +++.||+|+++.... .......+.+|+.+++.++||||+++++++.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 345566788999999999999999999886 488999999864321 111234578899999999999999999999999
Q ss_pred CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecc
Q 007107 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (618)
Q Consensus 481 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfg 560 (618)
+..++||||+++|+|.++++. ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~-----~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG 213 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFG 213 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEeCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccc
Confidence 999999999999999999862 3589999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccCccccccCC----ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSGI----YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+++.............+||+.|+|||++.+.. |+.++|||||||++|||++|+.||.
T Consensus 214 ~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~ 274 (410)
T 3v8s_A 214 TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 274 (410)
T ss_dssp TCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTC
T ss_pred eeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCC
Confidence 99877554443445678999999999998765 8899999999999999999999996
No 25
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.3e-38 Score=327.46 Aligned_cols=201 Identities=27% Similarity=0.379 Sum_probs=177.3
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
.++|+..+.||+|+||.||+|+.. +|+.||+|+++.... .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 357889999999999999999876 589999999975432 222356788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+++|+|.++++. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++...
T Consensus 84 ~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 84 MEYANGGELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 999999999999863 35689999999999999999999999 99999999999999999999999999997643
Q ss_pred CCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 157 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~ 206 (337)
T 1o6l_A 157 SDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 206 (337)
T ss_dssp CTT-CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCC-CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCC
Confidence 322 22345689999999999999999999999999999999999999995
No 26
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.7e-38 Score=325.26 Aligned_cols=214 Identities=37% Similarity=0.717 Sum_probs=187.1
Q ss_pred eeehhhhhhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEe
Q 007107 399 SYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCA 478 (618)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 478 (618)
.+...++....++|+..+.||+|+||.||+|.+.+|+.||+|++.... ....+.+.+|++++++++||||+++++++.
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 105 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES--SQGIEEFETEIETLSFCRHPHLVSLIGFCD 105 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC--SSHHHHHHHHHHGGGSCCCTTBCCEEEECC
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEc
Confidence 344556677889999999999999999999998889999999987553 234677899999999999999999999999
Q ss_pred eCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEee
Q 007107 479 EHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSD 558 (618)
Q Consensus 479 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~D 558 (618)
..+..++||||+++|+|.+++.........+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~D 182 (321)
T 2qkw_B 106 ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITD 182 (321)
T ss_dssp CTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECC
T ss_pred CCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEee
Confidence 99999999999999999999975444445799999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCC-ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 559 CGLAALTPNTE-RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 559 fgl~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
||+++...... ........||+.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 183 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~ 242 (321)
T 2qkw_B 183 FGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV 242 (321)
T ss_dssp CTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCS
T ss_pred cccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCccc
Confidence 99997654322 222334579999999999999999999999999999999999999985
No 27
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.9e-39 Score=338.90 Aligned_cols=210 Identities=23% Similarity=0.298 Sum_probs=181.8
Q ss_pred hhhhhhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEee
Q 007107 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479 (618)
Q Consensus 402 ~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 479 (618)
+.+.....++|+..+.||+|+||.||+|+.. +|+.||+|++.+... .......+.+|..++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3445556788999999999999999999886 689999999965322 11223457889999999999999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeec
Q 007107 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (618)
Q Consensus 480 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Df 559 (618)
.+..++||||+++|+|.++++.. ...+++..++.++.||+.||+|||++ +|+||||||+|||++.++++||+||
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DF 206 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADF 206 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeec
Confidence 99999999999999999999732 34689999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccccCccccc-------cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 560 GLAALTPNTERQVSTQMVGAFGYSAPEFAL-------SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 560 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|+++.............+||+.|+|||++. ...|+.++|||||||++|||++|+.||.
T Consensus 207 Gla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~ 271 (412)
T 2vd5_A 207 GSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFY 271 (412)
T ss_dssp TTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred hhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCC
Confidence 999876554443344568999999999997 4578999999999999999999999996
No 28
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.4e-38 Score=320.06 Aligned_cols=203 Identities=26% Similarity=0.382 Sum_probs=174.1
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
..++|+..+.||+|+||.||+|... +++.||+|++..... .....+.+.+|+..+++++||||+++++++.+.+..++
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 88 (294)
T 4eqm_A 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL 88 (294)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred hhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence 4567999999999999999999865 588999999854332 34456789999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+++++|.++++. .+.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 89 v~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 161 (294)
T 4eqm_A 89 VMEYIEGPTLSEYIES----HGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKAL 161 (294)
T ss_dssp EEECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred EEeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence 9999999999999963 35689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
............||+.|+|||++.+..++.++||||||+++|||+||+.||+
T Consensus 162 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~ 213 (294)
T 4eqm_A 162 SETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213 (294)
T ss_dssp -------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred ccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 5443333445679999999999999999999999999999999999999996
No 29
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=4.8e-38 Score=318.22 Aligned_cols=199 Identities=27% Similarity=0.428 Sum_probs=177.3
Q ss_pred hhcCCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
..++|+..+.||+|+||.||+|.. .+|+.||+|++...... ..+.+.+|+.++++++||||+++++++...+..++|
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc--HHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 456899999999999999999986 46899999998654332 346688999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 96 ~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (297)
T ss_dssp EECCTTCBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EECCCCCCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 999999999999962 3589999999999999999999999 99999999999999999999999999997665
Q ss_pred CCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 168 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 217 (297)
T 3fxz_A 168 PEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL 217 (297)
T ss_dssp STTC-CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred Cccc-ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 4332 2334679999999999999999999999999999999999999995
No 30
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=329.92 Aligned_cols=202 Identities=24% Similarity=0.380 Sum_probs=172.2
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 484 (618)
..++|+..+.||+|+||.||+|+.. +|+.||+|+++.... .......+.+|..+++.+ +||||+++++++.+.+..+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3467999999999999999999876 489999999975432 222345678889999887 7999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||+++|+|.++++. ...+++..++.++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++.
T Consensus 101 lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQK----SRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceee
Confidence 99999999999999973 35689999999999999999999999 999999999999999999999999999975
Q ss_pred CCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... .......+||+.|+|||++.+..|+.++|||||||++|||++|+.||.
T Consensus 174 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~ 225 (353)
T 3txo_A 174 GICN-GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225 (353)
T ss_dssp SCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cccC-CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCC
Confidence 4322 223345689999999999999999999999999999999999999996
No 31
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=3.4e-38 Score=321.14 Aligned_cols=207 Identities=35% Similarity=0.524 Sum_probs=173.6
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
......+|+..+.||+|+||.||+|+. .|+.||+|++..........+.+.+|++++++++||||+++++++...+..+
T Consensus 32 ~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 3p86_A 32 MDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110 (309)
T ss_dssp CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCE
T ss_pred ccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceE
Confidence 445567899999999999999999987 5889999999877666667788999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--ceecCCCCCCeeecCCCCcEEeecccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS--VVHRNFKSANILLDDELNPHLSDCGLA 562 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--iiH~Dlkp~NiLl~~~~~~kl~Dfgl~ 562 (618)
+||||+++|+|.++++... ....+++..++.++.|++.||+|||+. + |+||||||+|||++.++.+||+|||++
T Consensus 111 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a 186 (309)
T 3p86_A 111 IVTEYLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186 (309)
T ss_dssp EEEECCTTCBHHHHHHSTT-HHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC--
T ss_pred EEEecCCCCcHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCC
Confidence 9999999999999997321 112389999999999999999999999 7 999999999999999999999999999
Q ss_pred ccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 563 ALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 187 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~ 240 (309)
T 3p86_A 187 RLKASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG 240 (309)
T ss_dssp ----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTT
T ss_pred ccccccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 7554322 22334679999999999999999999999999999999999999996
No 32
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.4e-38 Score=331.67 Aligned_cols=201 Identities=25% Similarity=0.407 Sum_probs=175.1
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccH-HHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL-QEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 485 (618)
.++|+..+.||+|+||.||+|+.. +++.||+|++++..... .....+..|..++.++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467889999999999999999876 47899999997654332 2334577888888776 89999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+++|+|.++++. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++..
T Consensus 131 V~E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEcCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 9999999999999873 35689999999999999999999999 9999999999999999999999999999754
Q ss_pred CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... ......+||+.|+|||++.+..|+.++|||||||++|||++|+.||+
T Consensus 204 ~~~~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~ 254 (396)
T 4dc2_A 204 LRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254 (396)
T ss_dssp CCTT-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSST
T ss_pred ccCC-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCc
Confidence 3222 23345689999999999999999999999999999999999999994
No 33
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-38 Score=321.58 Aligned_cols=198 Identities=28% Similarity=0.457 Sum_probs=176.2
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
.++|+..+.||+|+||.||+|+.. +|+.||+|+++.... .....+.+.+|..+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 357889999999999999999876 589999999975432 112345678899999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+++|+|.++++. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++...
T Consensus 85 ~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 85 MDYIEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp ECCCCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred EeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 999999999999973 45689999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. ....+||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 158 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 204 (318)
T 1fot_A 158 DV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFY 204 (318)
T ss_dssp SC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTC
T ss_pred Cc----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCC
Confidence 32 234679999999999999999999999999999999999999995
No 34
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=6.7e-38 Score=323.61 Aligned_cols=201 Identities=26% Similarity=0.408 Sum_probs=177.4
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 485 (618)
.++|...+.||+|+||.||+|+.. +++.||+|+++.... .....+.+.+|..++.++ +||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 357888999999999999999876 488999999976543 334556788999999887 89999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+++|+|.++++. ...+++..++.++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++..
T Consensus 88 v~e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp EECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred EEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 9999999999999863 35689999999999999999999999 9999999999999999999999999999764
Q ss_pred CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||+
T Consensus 161 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 211 (345)
T 3a8x_A 161 LRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211 (345)
T ss_dssp CCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred cCCC-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcC
Confidence 3222 22345689999999999999999999999999999999999999995
No 35
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=7.9e-38 Score=325.42 Aligned_cols=202 Identities=26% Similarity=0.400 Sum_probs=180.2
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
...++|...+.||+|+||.||+|... +|+.||+|++..........+.+.+|++++++++||||+++++++.+.+..++
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 34567999999999999999999876 58999999998766666667789999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC---CCcEEeecccc
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE---LNPHLSDCGLA 562 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~---~~~kl~Dfgl~ 562 (618)
||||+++|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||++
T Consensus 106 v~e~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a 178 (362)
T 2bdw_A 106 VFDLVTGGELFEDIV----AREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA 178 (362)
T ss_dssp EECCCCSCBHHHHHT----TCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEecCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence 999999999999886 345689999999999999999999999 99999999999999864 45999999999
Q ss_pred ccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 563 ALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
....... ......||+.|+|||++.+..|+.++|||||||++|||++|+.||.
T Consensus 179 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~ 231 (362)
T 2bdw_A 179 IEVNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW 231 (362)
T ss_dssp BCCTTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred eEecCCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 8765332 2234679999999999999999999999999999999999999995
No 36
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=3.8e-38 Score=324.96 Aligned_cols=203 Identities=24% Similarity=0.411 Sum_probs=175.6
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 483 (618)
...++|...+.||+|+||.||+|+.. +|+.||+|+++.... .......+..|..++..+ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 34578999999999999999999886 589999999975432 112345567788888766 899999999999999999
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++||||+++|+|.++++. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++
T Consensus 94 ~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 166 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQS----CHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK 166 (345)
T ss_dssp EEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhh
Confidence 999999999999999973 35689999999999999999999999 99999999999999999999999999997
Q ss_pred cCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
...... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 167 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~ 219 (345)
T 1xjd_A 167 ENMLGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH 219 (345)
T ss_dssp CCCCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred hcccCC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCC
Confidence 643222 22345689999999999999999999999999999999999999996
No 37
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=329.51 Aligned_cols=205 Identities=18% Similarity=0.240 Sum_probs=174.0
Q ss_pred hhhhhcCCcccceeccCccceEEEEE------EcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC---CCcccccce
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAE------FANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR---HPNIVTLAG 475 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~------~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~ 475 (618)
++...++|...+.||+|+||.||+|. ..+++.||+|+++... ..++..|++.+++++ |+||+++++
T Consensus 60 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~l~~~~~~~iv~~~~ 134 (365)
T 3e7e_A 60 FQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN-----PWEFYIGTQLMERLKPSMQHMFMKFYS 134 (365)
T ss_dssp EECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC-----HHHHHHHHHHHHHSCGGGGGGBCCEEE
T ss_pred EEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC-----hhHHHHHHHHHHHhhhhhhhhhhhhhe
Confidence 34456789999999999999999993 4468999999997543 334566666666665 999999999
Q ss_pred EEeeCCeEEEEEEecCCCChhhhhhcccC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC----
Q 007107 476 YCAEHGQRLLVYEYVGNGNLHDMLHFADD-SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---- 550 (618)
Q Consensus 476 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~---- 550 (618)
++...+..++||||+++|+|.++++.... ....+++..++.++.||+.||+|||+. +|+||||||+|||++.
T Consensus 135 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~ 211 (365)
T 3e7e_A 135 AHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLE 211 (365)
T ss_dssp EEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTC
T ss_pred eeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccC
Confidence 99999999999999999999999975433 356799999999999999999999998 9999999999999998
Q ss_pred -------CCCcEEeeccccccCCC-CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 551 -------ELNPHLSDCGLAALTPN-TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 551 -------~~~~kl~Dfgl~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++.+||+|||+++.... .........+||+.|+|||++.+..|+.++|||||||++|||+||+.||.
T Consensus 212 ~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~ 286 (365)
T 3e7e_A 212 QDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKV 286 (365)
T ss_dssp C------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCE
T ss_pred ccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccc
Confidence 89999999999965431 12233345689999999999999999999999999999999999999984
No 38
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=6.8e-38 Score=327.09 Aligned_cols=200 Identities=29% Similarity=0.431 Sum_probs=176.2
Q ss_pred hcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
.++|...+.||+|+||.||+|.... ++.||+|++..... .......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 4678899999999999999998764 88999999865432 222346788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+.+|+|.++++ ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++++||+|||++....
T Consensus 94 ~e~~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQ----QNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp ECCCTTEEHHHHHH----TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EecCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 99999999999997 346799999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCccccccccccccccCcccccc---CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALS---GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... .....+||+.|+|||++.+ ..|+.++|||||||++|||++|+.||.
T Consensus 167 ~~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~ 218 (384)
T 4fr4_A 167 RET--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH 218 (384)
T ss_dssp TTC--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred CCC--ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCC
Confidence 332 2345689999999999974 458999999999999999999999995
No 39
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=9.8e-38 Score=323.98 Aligned_cols=201 Identities=24% Similarity=0.341 Sum_probs=177.8
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccH----HHHHHHHHHHHHhhcCCCCcccccceEEeeCCe
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL----QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (618)
..+.|...+.||+|+||.||+|... +|+.||+|.++...... ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 4567999999999999999999876 58999999987554321 124678899999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCC----CcEEee
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL----NPHLSD 558 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~----~~kl~D 558 (618)
.++||||+++|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||+++++ .+||+|
T Consensus 90 ~~lv~e~~~gg~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~D 162 (361)
T 2yab_A 90 VVLILELVSGGELFDFLA----QKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162 (361)
T ss_dssp EEEEEECCCSCBHHHHHT----TCSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred EEEEEEcCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEe
Confidence 999999999999999996 345799999999999999999999999 999999999999998776 799999
Q ss_pred ccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 559 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
||++....... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.
T Consensus 163 FG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~ 219 (361)
T 2yab_A 163 FGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219 (361)
T ss_dssp CSSCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSC
T ss_pred cCCceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 99998765432 2234679999999999999999999999999999999999999995
No 40
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=7.6e-38 Score=318.96 Aligned_cols=204 Identities=26% Similarity=0.397 Sum_probs=174.9
Q ss_pred hhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
+...++|+..+.||+|+||.||+|...+|+.||+|++............+.+|++++++++||||+++++++.+.+..++
T Consensus 17 q~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 96 (311)
T 3niz_A 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTL 96 (311)
T ss_dssp ECSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEE
T ss_pred cchHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEE
Confidence 44567899999999999999999999889999999997655444456778899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+++ +|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 97 v~e~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 169 (311)
T 3niz_A 97 VFEFMEK-DLKKVLDE---NKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAF 169 (311)
T ss_dssp EEECCSE-EHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEET
T ss_pred EEcCCCC-CHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceec
Confidence 9999985 78887753 345689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 170 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~ 221 (311)
T 3niz_A 170 GIPVR-SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFP 221 (311)
T ss_dssp TSCCC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred CCCcc-cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCC
Confidence 43322 2234578999999999976 568999999999999999999999995
No 41
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.4e-37 Score=315.14 Aligned_cols=201 Identities=26% Similarity=0.480 Sum_probs=176.7
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.++|...+.||+|+||.||+|.+. +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 86 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF--DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFIT 86 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEE
Confidence 467888999999999999999876 5899999988643 3456778999999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++|+|.++++. ....+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 87 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 160 (310)
T 3s95_A 87 EYIKGGTLRGIIKS---MDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVD 160 (310)
T ss_dssp ECCTTCBHHHHHHH---CCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-
T ss_pred EecCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccc
Confidence 99999999999974 245789999999999999999999999 999999999999999999999999999976543
Q ss_pred CCccc-------------cccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQV-------------STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~-------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..... .....||+.|+|||++.+..++.++||||||+++|||++|..||.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~ 223 (310)
T 3s95_A 161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADP 223 (310)
T ss_dssp -------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSST
T ss_pred ccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCc
Confidence 32211 114579999999999999999999999999999999999999985
No 42
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.4e-37 Score=324.73 Aligned_cols=206 Identities=29% Similarity=0.494 Sum_probs=178.5
Q ss_pred hhcCCcccceeccCccceEEEEEEc--------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEe
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA--------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCA 478 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 478 (618)
..++|...+.||+|+||.||+|.+. ++..||+|+++... .....+.+.+|+++++++ +||||+++++++.
T Consensus 79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 157 (370)
T 2psq_A 79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 157 (370)
T ss_dssp CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC-BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc-CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence 4567889999999999999999763 35679999997653 445567899999999999 8999999999999
Q ss_pred eCCeEEEEEEecCCCChhhhhhcccC------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCe
Q 007107 479 EHGQRLLVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANI 546 (618)
Q Consensus 479 ~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~Ni 546 (618)
..+..++||||+++|+|.++++.... ....+++.++..++.||+.||+|||++ +|+||||||+||
T Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NI 234 (370)
T 2psq_A 158 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV 234 (370)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGE
T ss_pred cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhE
Confidence 99999999999999999999975432 124589999999999999999999999 999999999999
Q ss_pred eecCCCCcEEeeccccccCCCCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 547 LLDDELNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 547 Ll~~~~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
|++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||+| |+.||.
T Consensus 235 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~ 307 (370)
T 2psq_A 235 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 307 (370)
T ss_dssp EECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred EECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCC
Confidence 999999999999999986643322 22233467889999999999999999999999999999999 999986
No 43
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=331.37 Aligned_cols=203 Identities=26% Similarity=0.369 Sum_probs=179.4
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
...++|+..+.||+|+||.||+|... +|+.+|+|++..........+.+.+|++++++++||||+++++++.+.+..++
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 34567999999999999999999765 68999999998766666667789999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeec---CCCCcEEeecccc
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD---DELNPHLSDCGLA 562 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~---~~~~~kl~Dfgl~ 562 (618)
||||+++|+|.+.+. ....+++..+..++.||+.||+|||++ +|+||||||+|||++ +++.+||+|||++
T Consensus 88 v~E~~~gg~L~~~i~----~~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a 160 (444)
T 3soa_A 88 IFDLVTGGELFEDIV----AREYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLA 160 (444)
T ss_dssp EECCCBCCBHHHHHH----HCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSC
T ss_pred EEEeCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCcee
Confidence 999999999999886 345699999999999999999999999 999999999999998 5678999999999
Q ss_pred ccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 563 ALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
........ ......||+.|+|||++.+..|+.++||||+||++|+|++|+.||.
T Consensus 161 ~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~ 214 (444)
T 3soa_A 161 IEVEGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFW 214 (444)
T ss_dssp BCCCTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEecCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCC
Confidence 77654322 2234689999999999999999999999999999999999999995
No 44
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=7.5e-38 Score=323.83 Aligned_cols=202 Identities=22% Similarity=0.348 Sum_probs=176.2
Q ss_pred hhcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 484 (618)
..++|+..+.||+|+||.||+|+... |+.||+|+++.... .......+..|..++..+ +||||+++++++.+.+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 34679999999999999999998875 78999999975432 122345678889999887 7999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||+++|+|.++++. .+.+++..++.++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++.
T Consensus 98 lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp EEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 99999999999999973 34689999999999999999999999 999999999999999999999999999976
Q ss_pred CCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 171 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~ 222 (353)
T 2i0e_A 171 NIWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222 (353)
T ss_dssp CCCTT-CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cccCC-cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCC
Confidence 43222 22345689999999999999999999999999999999999999996
No 45
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1e-37 Score=322.82 Aligned_cols=198 Identities=24% Similarity=0.376 Sum_probs=176.7
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
.++|+..+.||+|+||.||+|+.. +|+.||+|++..... .....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 467899999999999999999876 589999999865432 122346788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+++|+|.++++. .+.+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++...
T Consensus 120 ~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~ 192 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192 (350)
T ss_dssp EECCTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceecc
Confidence 999999999999973 35689999999999999999999999 99999999999999999999999999998664
Q ss_pred CCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. ....+||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 193 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~ 239 (350)
T 1rdq_E 193 GR----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239 (350)
T ss_dssp SC----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CC----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCC
Confidence 32 234689999999999999999999999999999999999999995
No 46
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=8.2e-38 Score=324.20 Aligned_cols=205 Identities=25% Similarity=0.346 Sum_probs=177.3
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCccccc---HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS---LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
.++|+..+.||+|+||.||+|... +|+.||+|++...... ....+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 457889999999999999999875 5899999998643211 113567899999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCC---cEEeeccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN---PHLSDCGL 561 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~---~kl~Dfgl 561 (618)
+||||+++++|.+++.........+++..+..++.||+.||+|||++ +|+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 99999999999988865444455689999999999999999999999 9999999999999986554 99999999
Q ss_pred cccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 180 a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~ 234 (351)
T 3c0i_A 180 AIQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFY 234 (351)
T ss_dssp CEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred eeEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCC
Confidence 98765432 22344679999999999999999999999999999999999999995
No 47
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.2e-37 Score=310.63 Aligned_cols=201 Identities=29% Similarity=0.494 Sum_probs=179.4
Q ss_pred hhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
..++|+..+.||+|+||.||+|.+.+++.||+|++...... .+++.+|++++++++||||+++++++.+.+..++||
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (269)
T 4hcu_A 8 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF 84 (269)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred ChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccC---HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEE
Confidence 34678889999999999999999988999999999865433 356889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++++|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 85 e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 158 (269)
T 4hcu_A 85 EFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 158 (269)
T ss_dssp ECCTTCBHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred EeCCCCcHHHHHHh---cCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccc
Confidence 99999999999963 345689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
..........+|+.|+|||++.+..++.++||||||+++|||++ |+.||+
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~ 209 (269)
T 4hcu_A 159 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 209 (269)
T ss_dssp HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred cccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCC
Confidence 43333344567889999999999999999999999999999999 999996
No 48
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-37 Score=316.22 Aligned_cols=198 Identities=19% Similarity=0.276 Sum_probs=176.6
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.++|...+.||+|+||.||+|... +++.||+|.+... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 80 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF 80 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEE
Confidence 467899999999999999999876 5889999998743 234567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC--CCCcEEeeccccccC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD--ELNPHLSDCGLAALT 565 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~--~~~~kl~Dfgl~~~~ 565 (618)
||+++|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++..
T Consensus 81 e~~~g~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~ 154 (321)
T 1tki_A 81 EFISGLDIFERINT---SAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154 (321)
T ss_dssp CCCCCCBHHHHHTS---SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred EeCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence 99999999999862 335689999999999999999999999 9999999999999987 789999999999876
Q ss_pred CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 155 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~ 204 (321)
T 1tki_A 155 KPGD--NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFL 204 (321)
T ss_dssp CTTC--EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred CCCC--ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence 5432 2234679999999999999889999999999999999999999995
No 49
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=3.4e-37 Score=315.56 Aligned_cols=195 Identities=28% Similarity=0.413 Sum_probs=174.1
Q ss_pred CcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEec
Q 007107 412 FSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYV 490 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 490 (618)
|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 124 (321)
T 2c30_A 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFL 124 (321)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch--hHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecC
Confidence 666778999999999999887 699999999865432 23567889999999999999999999999999999999999
Q ss_pred CCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCc
Q 007107 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER 570 (618)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~ 570 (618)
++++|.++++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 125 ~~~~L~~~l~-----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 196 (321)
T 2c30_A 125 QGGALTDIVS-----QVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP 196 (321)
T ss_dssp CSCBHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred CCCCHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc
Confidence 9999999985 34689999999999999999999999 999999999999999999999999999976654322
Q ss_pred cccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 571 QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 571 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
......||+.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 197 -~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~ 242 (321)
T 2c30_A 197 -KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYF 242 (321)
T ss_dssp -CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred -ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 2234679999999999999999999999999999999999999985
No 50
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.1e-37 Score=320.11 Aligned_cols=202 Identities=25% Similarity=0.403 Sum_probs=167.5
Q ss_pred hhcCCcccceeccCccceEEEEEE----cCCcEEEEEEcCcccc--cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEF----ANGKIMAVKKIDNAAL--SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (618)
..++|+..+.||+|+||.||+|+. .+|+.||+|+++.... .......+.+|++++++++||||+++++++...+
T Consensus 15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 94 (327)
T 3a62_A 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG 94 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS
T ss_pred CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC
Confidence 346789999999999999999987 4689999999976532 2234456788999999999999999999999999
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccc
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl 561 (618)
..++||||+++++|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 167 (327)
T 3a62_A 95 KLYLILEYLSGGELFMQLER----EGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGL 167 (327)
T ss_dssp CEEEEEECCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred EEEEEEeCCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCc
Confidence 99999999999999999863 34688999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 168 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 222 (327)
T 3a62_A 168 CKESIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT 222 (327)
T ss_dssp C-----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred ccccccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCC
Confidence 97543222 22334679999999999999999999999999999999999999996
No 51
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.2e-37 Score=324.54 Aligned_cols=202 Identities=27% Similarity=0.391 Sum_probs=168.4
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCccccc-HHHHHHHHHHHHH-hhcCCCCcccccceEEeeCCeEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSN-MSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
..++|+..+.||+|+||.||+|+.. +++.||+|+++..... ......+..|..+ ++.++||||+++++++.+.+..+
T Consensus 36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 3467999999999999999999876 4889999999765432 2334556667666 57789999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||+++|+|.++++. ...+++..++.++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++.
T Consensus 116 lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~ 188 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKE 188 (373)
T ss_dssp EEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred EEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccc
Confidence 99999999999999873 35688999999999999999999999 999999999999999999999999999975
Q ss_pred CCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..... ......+||+.|+|||++.+..|+.++|||||||++|||++|+.||.
T Consensus 189 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~ 240 (373)
T 2r5t_A 189 NIEHN-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFY 240 (373)
T ss_dssp GBCCC-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred cccCC-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCC
Confidence 43222 22345689999999999999999999999999999999999999995
No 52
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.1e-37 Score=319.26 Aligned_cols=201 Identities=27% Similarity=0.422 Sum_probs=173.6
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.++|+..+.||+|+||.||+|... +++.||+|++..... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 467999999999999999999876 689999999864432 223467889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++|+|.++++ ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 85 e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 157 (323)
T 3tki_A 85 EYCSGGELFDRIE----PDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (323)
T ss_dssp ECCTTEEGGGGSB----TTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EcCCCCcHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceecc
Confidence 9999999999986 345699999999999999999999999 999999999999999999999999999976532
Q ss_pred CC-ccccccccccccccCccccccCCc-cccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TE-RQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~-~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. ........||+.|+|||++.+..+ +.++|||||||++|||++|+.||+
T Consensus 158 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~ 209 (323)
T 3tki_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209 (323)
T ss_dssp TTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCS
T ss_pred CCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCC
Confidence 22 222335689999999999988776 789999999999999999999996
No 53
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.2e-37 Score=313.91 Aligned_cols=200 Identities=26% Similarity=0.395 Sum_probs=171.5
Q ss_pred cCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEe
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEY 489 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 489 (618)
++|...+.||+|+||.||+|...+|+.||+|++............+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 46888999999999999999988899999999976544333446788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 490 VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 490 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++ +|.+++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDV---CEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CSE-EHHHHHHT---STTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred cCC-CHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 985 89888863 345789999999999999999999999 99999999999999999999999999997654322
Q ss_pred ccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.
T Consensus 155 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 202 (288)
T 1ob3_A 155 R-KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFP 202 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred c-ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 1 22345789999999999764 58999999999999999999999996
No 54
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.3e-37 Score=335.50 Aligned_cols=206 Identities=24% Similarity=0.391 Sum_probs=181.0
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCccccc-HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
..++|...+.||+|+||.||+|+.. +|+.||+|++...... ......+.+|++++++++||||+++++++.+.+..++
T Consensus 183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 262 (543)
T 3c4z_A 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL 262 (543)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence 3467889999999999999999886 5999999999754322 1234678899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+++|+|.+++.........+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++..
T Consensus 263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 9999999999999875444456799999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..... .....+||+.|+|||++.+..|+.++|||||||++|||++|+.||.
T Consensus 340 ~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~ 390 (543)
T 3c4z_A 340 KAGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFR 390 (543)
T ss_dssp CTTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCC
Confidence 54322 2234589999999999999999999999999999999999999995
No 55
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.6e-37 Score=312.04 Aligned_cols=204 Identities=26% Similarity=0.446 Sum_probs=178.3
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
.....++|...+.||+|+||.||+|.+.++..||+|+++..... .+++.+|++++.+++||||+++++++.+.+..+
T Consensus 19 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 95 (283)
T 3gen_A 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIF 95 (283)
T ss_dssp TBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred ccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC---HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeE
Confidence 34556789999999999999999999998999999999865433 356889999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||+++++|.++++.. ...+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.
T Consensus 96 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 169 (283)
T 3gen_A 96 IITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRY 169 (283)
T ss_dssp EEECCCTTCBHHHHHHCG---GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGG
T ss_pred EEEeccCCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccc
Confidence 999999999999999632 35689999999999999999999999 999999999999999999999999999987
Q ss_pred CCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.............+|+.|+|||++.+..++.++||||||+++|||+| |+.||+
T Consensus 170 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~ 223 (283)
T 3gen_A 170 VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223 (283)
T ss_dssp BCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred ccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 65443333334567889999999999999999999999999999998 999996
No 56
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.8e-37 Score=309.04 Aligned_cols=202 Identities=27% Similarity=0.454 Sum_probs=180.2
Q ss_pred hhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
...++|+..+.||+|+||.||+|.+.++..||+|+++..... .+++.+|++.+.+++||||+++++++.+.+..++|
T Consensus 5 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (268)
T 3sxs_A 5 LKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS---EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81 (268)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC---HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred echhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc---HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEE
Confidence 345688999999999999999999998889999999765433 35688999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+++++|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 82 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 155 (268)
T 3sxs_A 82 TEYISNGCLLNYLRSH---GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVL 155 (268)
T ss_dssp EECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECC
T ss_pred EEccCCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecc
Confidence 9999999999999642 34589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
...........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||+
T Consensus 156 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~ 207 (268)
T 3sxs_A 156 DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYD 207 (268)
T ss_dssp TTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTT
T ss_pred hhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCcc
Confidence 544444444567788999999999999999999999999999999 999996
No 57
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=3.2e-37 Score=316.29 Aligned_cols=203 Identities=29% Similarity=0.464 Sum_probs=175.2
Q ss_pred hhcCCcccceeccCccceEEEEEEc----CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
..++|...+.||+|+||.||+|.+. .+..||||+++... .....+.+.+|++++++++||||+++++++.+.+..
T Consensus 47 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 125 (325)
T 3kul_A 47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA 125 (325)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred ChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence 4567889999999999999999875 35569999997543 445567899999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++||||+++|+|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 126 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRT---HDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp EEEEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred EEEeeCCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccc
Confidence 999999999999999963 345799999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCcc--ccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 564 LTPNTERQ--VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
........ ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~ 256 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYW 256 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcc
Confidence 76543221 2233456788999999999999999999999999999999 999995
No 58
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-37 Score=318.46 Aligned_cols=200 Identities=31% Similarity=0.473 Sum_probs=174.3
Q ss_pred hcCCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccccH-HHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSL-QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
.++|...+.||+|+||.||+|.+ .+|+.||+|++....... .....+.+|+++++.++||||+++++++...+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46799999999999999999987 468999999986433211 1235688999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+ +|+|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++....
T Consensus 88 ~E~~-~g~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 88 IEYA-GGELFDYIVE----KKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp ECCC-CEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred EECC-CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 9999 6799888863 35689999999999999999999999 99999999999999999999999999998664
Q ss_pred CCCccccccccccccccCccccccCCc-cccchhhhHHHHHHHHHhCCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
... .....+||+.|+|||++.+..+ +.++|||||||++|||++|+.||+.
T Consensus 160 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~ 210 (336)
T 3h4j_B 160 DGN--FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD 210 (336)
T ss_dssp TSB--TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBC
T ss_pred CCc--ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCC
Confidence 432 2234579999999999998876 6899999999999999999999963
No 59
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=4.9e-37 Score=310.10 Aligned_cols=199 Identities=23% Similarity=0.372 Sum_probs=173.7
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
++|+..+.||+|+||.||+|... +|+.||+|++............+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 47889999999999999999876 58999999997665555566788999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+++ ++.+.+.. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~~-~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 82 FCDQ-DLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp CCSE-EHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred cCCC-CHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9986 55555542 346799999999999999999999999 9999999999999999999999999999876433
Q ss_pred CccccccccccccccCccccccCC-ccccchhhhHHHHHHHHHhCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALSGI-YTVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~il~elltg~~Pf 616 (618)
.. ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||
T Consensus 155 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~ 202 (292)
T 3o0g_A 155 VR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202 (292)
T ss_dssp CS-CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCS
T ss_pred cc-cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCC
Confidence 22 223457899999999998766 799999999999999999998885
No 60
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.9e-37 Score=315.08 Aligned_cols=201 Identities=24% Similarity=0.360 Sum_probs=177.1
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccH----HHHHHHHHHHHHhhcCCCCcccccceEEeeCCe
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL----QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (618)
..++|...+.||+|+||.||+|... +|+.||+|.+....... ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 88 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 3467889999999999999999876 58999999987543221 135678899999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCC----CcEEee
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL----NPHLSD 558 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~----~~kl~D 558 (618)
.++||||+++++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|
T Consensus 89 ~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~D 161 (326)
T 2y0a_A 89 VILILELVAGGELFDFLA----EKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIID 161 (326)
T ss_dssp EEEEEECCCSCBHHHHHT----TSSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECC
T ss_pred EEEEEEcCCCCCHHHHHH----hcCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEE
Confidence 999999999999999996 345789999999999999999999999 999999999999999887 799999
Q ss_pred ccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 559 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 162 fg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~ 218 (326)
T 2y0a_A 162 FGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218 (326)
T ss_dssp CTTCEECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSC
T ss_pred CCCCeECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCC
Confidence 999987643322 234579999999999999999999999999999999999999995
No 61
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=8.1e-37 Score=321.52 Aligned_cols=205 Identities=23% Similarity=0.326 Sum_probs=180.1
Q ss_pred hhcCCcccceeccC--ccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 408 ATNSFSQEFLIGEG--SLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G--~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
..++|+..+.||+| +||.||+|... +|+.||+|++..........+.+.+|++++++++||||+++++++.+.+..+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 34679999999999 99999999886 6999999999877666667788999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||+++|+|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||.+..
T Consensus 103 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTH--FMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEEECCTTCBHHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEccCCCCHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 999999999999999642 235689999999999999999999999 999999999999999999999999998864
Q ss_pred CCCCC------ccccccccccccccCcccccc--CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 565 TPNTE------RQVSTQMVGAFGYSAPEFALS--GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 565 ~~~~~------~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 238 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 238 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCC
Confidence 32111 111223478999999999987 679999999999999999999999996
No 62
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.4e-37 Score=309.71 Aligned_cols=200 Identities=23% Similarity=0.356 Sum_probs=168.6
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccH------------------------HHHHHHHHHHHHhh
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL------------------------QEEDNFLEAVSNMS 463 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~------------------------~~~~~~~~e~~~l~ 463 (618)
.++|...+.||+|+||.||+|... +++.||+|++....... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 467899999999999999999875 58899999986543211 12356889999999
Q ss_pred cCCCCcccccceEEee--CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCC
Q 007107 464 RLRHPNIVTLAGYCAE--HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNF 541 (618)
Q Consensus 464 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dl 541 (618)
+++||||+++++++.+ .+..++||||+++++|.+++. ...+++..+..++.|++.||+|||+. +|+||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dl 163 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDI 163 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence 9999999999999987 568899999999999988763 45799999999999999999999999 9999999
Q ss_pred CCCCeeecCCCCcEEeeccccccCCCCCccccccccccccccCccccccCC---ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 542 KSANILLDDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGI---YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 542 kp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
||+|||++.++.+||+|||+++....... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 241 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM 241 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CHHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCC
Confidence 99999999999999999999987654322 233467999999999998765 4788999999999999999999996
No 63
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=7.9e-37 Score=310.76 Aligned_cols=202 Identities=29% Similarity=0.485 Sum_probs=171.8
Q ss_pred hhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
...++|...+.||+|+||.||+|.+. ..+|+|.++.........+.+.+|++++++++||||+++++++. .+..++|
T Consensus 33 i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv 109 (307)
T 3lb7_A 33 IEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIV 109 (307)
T ss_dssp CCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEE
Confidence 44578999999999999999999864 46899988876666667788999999999999999999999875 4568999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+++++|.++++. ....+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...
T Consensus 110 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~ 183 (307)
T 3lb7_A 110 TQWCEGSSLYKHLHV---QETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp EECCSSCBHHHHHHT---SCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC--
T ss_pred EecCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecc
Confidence 999999999999863 356799999999999999999999999 99999999999999999999999999997554
Q ss_pred CC-CccccccccccccccCccccc---cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NT-ERQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~-~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. .........||+.|+|||++. +..++.++|||||||++|||++|+.||.
T Consensus 184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~ 238 (307)
T 3lb7_A 184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYS 238 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred cccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence 22 122233457999999999986 5678999999999999999999999996
No 64
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.8e-37 Score=316.25 Aligned_cols=203 Identities=26% Similarity=0.394 Sum_probs=169.4
Q ss_pred hhcCCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCe---
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ--- 482 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--- 482 (618)
..++|+..+.||+|+||.||+|.+ .+++.||+|++..... .......+.+|++.+++++||||+++++++.....
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 456899999999999999999987 4689999999976533 33445678999999999999999999999876543
Q ss_pred -EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccc
Q 007107 483 -RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (618)
Q Consensus 483 -~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl 561 (618)
.++||||+++++|.++++. ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 162 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGI 162 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSC
T ss_pred ccEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccC
Confidence 4999999999999999973 35689999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCcc--ccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNTERQ--VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 163 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~ 220 (311)
T 3ork_A 163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220 (311)
T ss_dssp C------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred cccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 9766433221 2234579999999999999999999999999999999999999996
No 65
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.6e-37 Score=334.74 Aligned_cols=204 Identities=27% Similarity=0.420 Sum_probs=179.2
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCccccc-HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
...++|...+.||+|+||.||+|... +|+.||+|++...... ......+.+|++++++++||||+++++++.+.+..+
T Consensus 181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~ 260 (576)
T 2acx_A 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC 260 (576)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEE
Confidence 34567999999999999999999876 6999999999754321 223456889999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||+++|+|.+++... ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++.
T Consensus 261 lVmEy~~gg~L~~~l~~~--~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~ 335 (576)
T 2acx_A 261 LVLTLMNGGDLKFHIYHM--GQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVH 335 (576)
T ss_dssp EEECCCCSCBHHHHHHSS--SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEcCCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEeccccee
Confidence 999999999999998632 234589999999999999999999999 999999999999999999999999999987
Q ss_pred CCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
...... ....+||+.|+|||++.+..|+.++|||||||++|||++|+.||.
T Consensus 336 ~~~~~~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~ 386 (576)
T 2acx_A 336 VPEGQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386 (576)
T ss_dssp CCTTCC--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSS
T ss_pred cccCcc--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCc
Confidence 654322 234589999999999999999999999999999999999999996
No 66
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.4e-37 Score=322.15 Aligned_cols=202 Identities=27% Similarity=0.426 Sum_probs=165.5
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-CCcccccceEEeeCC--e
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHG--Q 482 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~ 482 (618)
...++|+..+.||+|+||.||+|.+. +|+.||+|++............+.+|+.++.++. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 34578999999999999999999865 5899999999766556667778889999999997 999999999997654 6
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccc
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~ 562 (618)
.++||||++ ++|.++++. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 86 ~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 156 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLS 156 (388)
T ss_dssp EEEEEECCS-EEHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecccC-cCHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccc
Confidence 899999997 589988862 4689999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCC--------------------CccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 563 ALTPNT--------------------ERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 563 ~~~~~~--------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+..... ........+||+.|+|||++.+ ..|+.++|||||||++|||++|+.||.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 232 (388)
T 3oz6_A 157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP 232 (388)
T ss_dssp EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCC
Confidence 765321 1112334689999999999987 678999999999999999999999995
No 67
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=4.6e-37 Score=320.96 Aligned_cols=203 Identities=26% Similarity=0.460 Sum_probs=165.8
Q ss_pred hhcCCcccceeccCccceEEEEEEc----CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
...+|...+.||+|+||.||+|.+. ++..||||+++... .....+.+.+|++++++++||||+++++++.+.+..
T Consensus 43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 121 (373)
T 2qol_A 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV 121 (373)
T ss_dssp CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence 3467899999999999999999875 47789999997643 445567899999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++||||+++|+|.++++. ....+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 122 ~lv~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 195 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRK---HDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGR 195 (373)
T ss_dssp EEEEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred EEEEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccc
Confidence 999999999999999973 345789999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCccc--cccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 564 LTPNTERQV--STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
......... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~ 252 (373)
T 2qol_A 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252 (373)
T ss_dssp ------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTT
T ss_pred ccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCC
Confidence 765332211 122346788999999999999999999999999999998 999985
No 68
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.3e-37 Score=331.50 Aligned_cols=202 Identities=26% Similarity=0.382 Sum_probs=167.9
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
..++|+..+.||+|+||.||+|... +|+.||+|+++.... .......+.+|+++++.++||||+++++++...+..++
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 3467999999999999999999875 589999999975432 23345677889999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHE-VCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ . +|+||||||+|||++.++.+||+|||+++.
T Consensus 226 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~ 298 (446)
T 4ejn_A 226 VMEYANGGELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKE 298 (446)
T ss_dssp EECCCSSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCT
T ss_pred EEeeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCcee
Confidence 9999999999998863 3568999999999999999999998 7 999999999999999999999999999976
Q ss_pred CCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..... ......+||+.|+|||++.+..|+.++|||||||++|||++|+.||.
T Consensus 299 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~ 350 (446)
T 4ejn_A 299 GIKDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 350 (446)
T ss_dssp TCC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred ccCCC-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCC
Confidence 43322 22345689999999999999999999999999999999999999995
No 69
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-36 Score=317.06 Aligned_cols=199 Identities=22% Similarity=0.351 Sum_probs=176.1
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.++|...+.||+|+||.||+|... +|+.||+|.+.... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 127 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL 127 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc--hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEE
Confidence 467999999999999999999876 58899999986543 334567899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC--CCCcEEeeccccccC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD--ELNPHLSDCGLAALT 565 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~--~~~~kl~Dfgl~~~~ 565 (618)
||+++|+|.+++.. ....+++..+..++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+++..
T Consensus 128 E~~~gg~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 128 EFLSGGELFDRIAA---EDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp ECCCCCBHHHHTTC---TTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EcCCCCcHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceec
Confidence 99999999998862 345789999999999999999999999 9999999999999974 578999999999876
Q ss_pred CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 202 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~ 251 (387)
T 1kob_A 202 NPDE--IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFA 251 (387)
T ss_dssp CTTS--CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSC
T ss_pred CCCc--ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCC
Confidence 5432 2234579999999999999999999999999999999999999996
No 70
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1e-36 Score=313.26 Aligned_cols=203 Identities=24% Similarity=0.360 Sum_probs=171.6
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC------
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG------ 481 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 481 (618)
.++|+..+.||+|+||.||+|.+. +|+.||||++.... .....+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 467889999999999999999886 69999999987544 3345678999999999999999999999986543
Q ss_pred ---------------------------------------------------eEEEEEEecCCCChhhhhhcccCCCCCCC
Q 007107 482 ---------------------------------------------------QRLLVYEYVGNGNLHDMLHFADDSSKNLT 510 (618)
Q Consensus 482 ---------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~l~ 510 (618)
..++||||+++++|.++++... .....+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~ 162 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC-SLEDRE 162 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC-SGGGSC
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc-Cccchh
Confidence 3799999999999999997432 233456
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCc-----------ccccccccc
Q 007107 511 WNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTER-----------QVSTQMVGA 579 (618)
Q Consensus 511 ~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~-----------~~~~~~~gt 579 (618)
+..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....... .......||
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt 239 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred hHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence 778899999999999999999 999999999999999999999999999987654321 122345799
Q ss_pred ccccCccccccCCccccchhhhHHHHHHHHHhCCCCC
Q 007107 580 FGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 580 ~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf 616 (618)
+.|+|||++.+..++.++|||||||++|||++|..|+
T Consensus 240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~ 276 (332)
T 3qd2_B 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQ 276 (332)
T ss_dssp GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCH
T ss_pred cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCCh
Confidence 9999999999999999999999999999999998875
No 71
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=4.9e-37 Score=321.55 Aligned_cols=206 Identities=24% Similarity=0.416 Sum_probs=178.2
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
.....++|...+.||+|+||.||+|.+. +++.||+|.++... .....+.+.+|++++++++||||+++++++...+..
T Consensus 109 ~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 187 (377)
T 3cbl_A 109 WVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPI 187 (377)
T ss_dssp TBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS-CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred cEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCc
Confidence 3445578899999999999999999886 68999999987543 344556789999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++||||+++|+|.++++. ....+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++
T Consensus 188 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~ 261 (377)
T 3cbl_A 188 YIVMELVQGGDFLTFLRT---EGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSR 261 (377)
T ss_dssp EEEEECCTTCBHHHHHHH---HGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEEEEcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCce
Confidence 999999999999999973 234589999999999999999999999 99999999999999999999999999997
Q ss_pred cCCCCCcccc-ccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 564 LTPNTERQVS-TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.......... ....+++.|+|||++.+..++.++|||||||++|||+| |+.||.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~ 317 (377)
T 3cbl_A 262 EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYP 317 (377)
T ss_dssp ECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred ecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 6543221111 12346788999999999999999999999999999998 999986
No 72
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.2e-37 Score=317.95 Aligned_cols=201 Identities=24% Similarity=0.341 Sum_probs=171.8
Q ss_pred hhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCC--CcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH--PNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~l 485 (618)
..++|+..+.||+|+||.||+|...+++.||+|++.......+..+.+.+|++++.+++| |||+++++++...+..++
T Consensus 7 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 7 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp SSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred ecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 456799999999999999999999889999999998766666677889999999999986 999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||| +.+++|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+++..
T Consensus 87 v~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 87 VME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp EEC-CCSEEHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred EEe-CCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 999 567899999973 45789999999999999999999999 999999999999997 568999999999876
Q ss_pred CCCCcc-ccccccccccccCcccccc-----------CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQ-VSTQMVGAFGYSAPEFALS-----------GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||+
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 221 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 221 (343)
T ss_dssp ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcch
Confidence 543322 2335679999999999865 678999999999999999999999996
No 73
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=3.8e-37 Score=315.40 Aligned_cols=204 Identities=26% Similarity=0.382 Sum_probs=172.5
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC---
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG--- 481 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--- 481 (618)
+....++|+..+.||+|+||.||+|++. ++.||||++.... .....+..|+..+++++||||+++++++....
T Consensus 19 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (322)
T 3soc_A 19 LYFQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD---KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVD 94 (322)
T ss_dssp EEETTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSS
T ss_pred cccchhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc---hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCC
Confidence 3445678999999999999999999886 7999999996542 33445667899999999999999999998754
Q ss_pred -eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhc-------CCCCceecCCCCCCeeecCCCC
Q 007107 482 -QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV-------CLPSVVHRNFKSANILLDDELN 553 (618)
Q Consensus 482 -~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-------~~~~iiH~Dlkp~NiLl~~~~~ 553 (618)
..++||||+++|+|.++++. ..+++..+..++.|++.||+|||+. +.++|+||||||+|||++.++.
T Consensus 95 ~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~ 169 (322)
T 3soc_A 95 VDLWLITAFHEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLT 169 (322)
T ss_dssp EEEEEEEECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCC
T ss_pred ceEEEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCe
Confidence 47999999999999999963 4589999999999999999999986 1237999999999999999999
Q ss_pred cEEeeccccccCCCCCc-cccccccccccccCcccccc-----CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 554 PHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALS-----GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 554 ~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+||+|||+++....... .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||.
T Consensus 170 ~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~ 239 (322)
T 3soc_A 170 ACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239 (322)
T ss_dssp EEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSS
T ss_pred EEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCC
Confidence 99999999976543322 22234579999999999987 356778999999999999999999985
No 74
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=4.2e-37 Score=330.04 Aligned_cols=204 Identities=25% Similarity=0.467 Sum_probs=178.1
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
.+...++|...+.||+|+||.||+|.+.++..||||+++.... ..+.|.+|++++++++||||+++++++. .+..+
T Consensus 183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~ 258 (454)
T 1qcf_A 183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIY 258 (454)
T ss_dssp SBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCE
T ss_pred eeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCc---cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccE
Confidence 4455678899999999999999999998899999999986543 3567999999999999999999999986 56789
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||+++|+|.++++... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 259 lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~ 333 (454)
T 1qcf_A 259 IITEFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARV 333 (454)
T ss_dssp EEECCCTTCBHHHHHHSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGG
T ss_pred EEEeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceE
Confidence 9999999999999997321 23578899999999999999999999 999999999999999999999999999987
Q ss_pred CCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.............+|+.|+|||++....++.++|||||||++|||+| |+.||.
T Consensus 334 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~ 387 (454)
T 1qcf_A 334 IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYP 387 (454)
T ss_dssp BCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred cCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCC
Confidence 65433222334457789999999999999999999999999999999 999996
No 75
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=7.3e-37 Score=316.09 Aligned_cols=210 Identities=28% Similarity=0.467 Sum_probs=180.0
Q ss_pred hhhhhhcCCcccceeccCccceEEEEEEcC------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEE
Q 007107 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC 477 (618)
Q Consensus 404 ~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 477 (618)
.+....++|...+.||+|+||.||+|.+.+ ++.||+|.++... .....+.+.+|++++++++||||+++++++
T Consensus 41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~ 119 (343)
T 1luf_A 41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVC 119 (343)
T ss_dssp HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 345567889999999999999999998753 4889999997543 344567899999999999999999999999
Q ss_pred eeCCeEEEEEEecCCCChhhhhhcccCC--------------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCce
Q 007107 478 AEHGQRLLVYEYVGNGNLHDMLHFADDS--------------------SKNLTWNARVRVALGTARALEYLHEVCLPSVV 537 (618)
Q Consensus 478 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ii 537 (618)
.+.+..++||||+++|+|.++++..... ...+++.+++.++.||++||+|||+. +|+
T Consensus 120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~iv 196 (343)
T 1luf_A 120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFV 196 (343)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 9999999999999999999999753211 25789999999999999999999999 999
Q ss_pred ecCCCCCCeeecCCCCcEEeeccccccCCCCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCC
Q 007107 538 HRNFKSANILLDDELNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKP 615 (618)
Q Consensus 538 H~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~P 615 (618)
||||||+|||+++++.+||+|||+++....... .......+|+.|+|||++.+..++.++||||||+++|||+| |+.|
T Consensus 197 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 276 (343)
T 1luf_A 197 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276 (343)
T ss_dssp CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred cCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCc
Confidence 999999999999999999999999975532221 12233568899999999999999999999999999999999 9999
Q ss_pred CC
Q 007107 616 LD 617 (618)
Q Consensus 616 f~ 617 (618)
|.
T Consensus 277 ~~ 278 (343)
T 1luf_A 277 YY 278 (343)
T ss_dssp TT
T ss_pred CC
Confidence 85
No 76
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.2e-36 Score=311.02 Aligned_cols=203 Identities=23% Similarity=0.390 Sum_probs=160.7
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.++|+..+.||+|+||.||+|... +|+.||+|+++... .....+.+.+|++++++++||||+++++++...+..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS-EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS-TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc-ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 357888999999999999999875 58999999986543 2223456789999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccc--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 488 EYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||++ |+|.+++.... .....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9998 59999886432 2234689999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 159 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 210 (317)
T 2pmi_A 159 GIPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFP 210 (317)
T ss_dssp TSCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred CCCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 43222 2234578999999999976 468999999999999999999999995
No 77
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-36 Score=326.06 Aligned_cols=202 Identities=27% Similarity=0.482 Sum_probs=177.7
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCccccc-HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
..++|...+.||+|+||.||+|.+. +|+.||+|++...... ......+.+|+++++.++||||+++++++...+..++
T Consensus 14 ~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~l 93 (476)
T 2y94_A 14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFM 93 (476)
T ss_dssp EETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred eecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 3467889999999999999999876 6999999999754321 1234678899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+++|+|.+++. ..+.+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 94 v~E~~~gg~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~ 166 (476)
T 2y94_A 94 VMEYVSGGELFDYIC----KNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMM 166 (476)
T ss_dssp EEECCSSEEHHHHTT----SSSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EEeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhc
Confidence 999999999999996 346799999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCccccccccccccccCccccccCCc-cccchhhhHHHHHHHHHhCCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
.... .....+||+.|+|||++.+..+ +.++|||||||++|||++|+.||+.
T Consensus 167 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~ 218 (476)
T 2y94_A 167 SDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD 218 (476)
T ss_dssp CTTC--CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccc--cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCC
Confidence 5432 2234579999999999998776 6899999999999999999999963
No 78
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=315.69 Aligned_cols=198 Identities=26% Similarity=0.417 Sum_probs=160.9
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
...++|...+.||+|+||.||+|... +++.||+|+++... ..+.+.+|++++++++||||+++++++...+..++
T Consensus 50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 125 (349)
T 2w4o_A 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISL 125 (349)
T ss_dssp CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEE
Confidence 45677999999999999999999887 47899999987532 34668899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC---CCCcEEeecccc
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---ELNPHLSDCGLA 562 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~---~~~~kl~Dfgl~ 562 (618)
||||+++|+|.+++. ....+++.++..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||++
T Consensus 126 v~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a 198 (349)
T 2w4o_A 126 VLELVTGGELFDRIV----EKGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLS 198 (349)
T ss_dssp EECCCCSCBHHHHHT----TCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC--
T ss_pred EEEeCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccc
Confidence 999999999999986 345689999999999999999999999 9999999999999975 889999999999
Q ss_pred ccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 563 ALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 199 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 251 (349)
T 2w4o_A 199 KIVEHQ--VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFY 251 (349)
T ss_dssp ----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred cccCcc--cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCC
Confidence 765432 22234679999999999999999999999999999999999999995
No 79
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=5.8e-37 Score=319.00 Aligned_cols=214 Identities=25% Similarity=0.437 Sum_probs=180.5
Q ss_pred eehhhhhhhhcCCcccceeccCccceEEEEEEc------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccc
Q 007107 400 YTVASLQTATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVT 472 (618)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~ 472 (618)
+.....+...++|...+.||+|+||.||+|.+. +++.||||+++... .....+.+.+|++++.++ +||||++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC-CHHHHHHHHHHHHHHHhhcCCcceee
Confidence 334455667789999999999999999999742 46889999997543 344567899999999999 7999999
Q ss_pred cceEEeeCC-eEEEEEEecCCCChhhhhhcccCC----------------------------------------------
Q 007107 473 LAGYCAEHG-QRLLVYEYVGNGNLHDMLHFADDS---------------------------------------------- 505 (618)
Q Consensus 473 l~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~---------------------------------------------- 505 (618)
+++++.+.+ ..++||||+++|+|.++++.....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 999998765 489999999999999999753321
Q ss_pred ----------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCC
Q 007107 506 ----------------SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 506 ----------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++.......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 12289999999999999999999999 99999999999999999999999999998654332
Q ss_pred c-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 570 R-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 570 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
. .......||+.|+|||++.+..++.++|||||||++|||+| |+.||.
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 297 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 297 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCC
Confidence 2 22344578999999999999999999999999999999998 999995
No 80
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-36 Score=308.26 Aligned_cols=200 Identities=26% Similarity=0.302 Sum_probs=168.9
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 485 (618)
..++|+..+.||+|+||+||+|... +|+.||||++............+..|+..+.++ +||||+++++++.+.+..++
T Consensus 55 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 4467999999999999999999887 699999999876555555555666666655554 89999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+ +++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 135 v~e~~-~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~ 207 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207 (311)
T ss_dssp EEECC-CCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEEC
T ss_pred EEecc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeec
Confidence 99999 66898888642 35699999999999999999999999 9999999999999999999999999999766
Q ss_pred CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... ......||+.|+|||++.+ .++.++|||||||++|||++|..||.
T Consensus 208 ~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~ 256 (311)
T 3p1a_A 208 GTAG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPH 256 (311)
T ss_dssp C--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCS
T ss_pred ccCC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 4332 2234579999999998876 78999999999999999999976653
No 81
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2e-36 Score=308.41 Aligned_cols=200 Identities=26% Similarity=0.398 Sum_probs=172.1
Q ss_pred cCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
++|+..+.||+|+||.||+|.... |+.||+|++..........+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 578899999999999999998864 8999999997766555567788999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+++++|.++++ ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~~~~l~~~~~----~~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 83 YCDHTVLHELDR----YQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp CCSEEHHHHHHH----TSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred eCCCchHHHHHh----hhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 999999998876 345689999999999999999999999 9999999999999999999999999999876533
Q ss_pred CccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||.
T Consensus 156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 204 (311)
T 4agu_A 156 SD-YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWP 204 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred cc-ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence 22 2234578999999999976 668999999999999999999999996
No 82
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.4e-36 Score=325.95 Aligned_cols=198 Identities=23% Similarity=0.306 Sum_probs=169.0
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC------
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH------ 480 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 480 (618)
..++|+..+.||+|+||.||+|... +|+.||||++..........+++.+|+++++.++||||+++++++...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 3578999999999999999999765 589999999987655666778899999999999999999999999654
Q ss_pred CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecc
Q 007107 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (618)
Q Consensus 481 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfg 560 (618)
...++||||+++ ++.+.++ ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~------~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG 209 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 209 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred CeEEEEEeCCCC-CHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEE
Confidence 357999999976 4666663 2489999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+++..... ......+||+.|+|||++.+..|+.++|||||||++|||++|+.||.
T Consensus 210 ~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~ 264 (464)
T 3ttj_A 210 LARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 264 (464)
T ss_dssp CC-----C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred eeeecCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99866432 22345689999999999999999999999999999999999999996
No 83
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.2e-36 Score=310.31 Aligned_cols=209 Identities=29% Similarity=0.467 Sum_probs=180.1
Q ss_pred hhhhhcCCcccceeccCccceEEEEEE------cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEe
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEF------ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCA 478 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 478 (618)
.+...++|...+.||+|+||.||+|.. .+++.||+|+++... .....+.+.+|++++++++||||+++++++.
T Consensus 18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 96 (314)
T 2ivs_A 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHPHVIKLYGACS 96 (314)
T ss_dssp TBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred cccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCceeeEEEEEe
Confidence 344567899999999999999999976 245889999997543 4455678999999999999999999999999
Q ss_pred eCCeEEEEEEecCCCChhhhhhcccC--------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 007107 479 EHGQRLLVYEYVGNGNLHDMLHFADD--------------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVH 538 (618)
Q Consensus 479 ~~~~~~lv~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH 538 (618)
+.+..++||||+++++|.++++.... ....+++.+++.++.|+++||+|||+. +|+|
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH 173 (314)
T 2ivs_A 97 QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVH 173 (314)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred cCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcc
Confidence 99999999999999999999975432 123489999999999999999999999 9999
Q ss_pred cCCCCCCeeecCCCCcEEeeccccccCCCCCcc-ccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCC
Q 007107 539 RNFKSANILLDDELNPHLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPL 616 (618)
Q Consensus 539 ~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf 616 (618)
|||||+||++++++.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||
T Consensus 174 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 253 (314)
T 2ivs_A 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253 (314)
T ss_dssp CCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred cccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999999999866443322 2233467889999999999999999999999999999999 99998
Q ss_pred C
Q 007107 617 D 617 (618)
Q Consensus 617 ~ 617 (618)
.
T Consensus 254 ~ 254 (314)
T 2ivs_A 254 P 254 (314)
T ss_dssp T
T ss_pred C
Confidence 6
No 84
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=310.50 Aligned_cols=203 Identities=24% Similarity=0.378 Sum_probs=174.5
Q ss_pred hhcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC--eEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG--QRL 484 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~ 484 (618)
..++|...+.||+|+||.||+|.... |+.||+|++...... ...+.+.+|++++++++||||+++++++...+ ..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (319)
T 4euu_A 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (319)
T ss_dssp SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG-SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence 34678899999999999999998764 899999999754322 23566789999999999999999999998765 789
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeee----cCCCCcEEeecc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL----DDELNPHLSDCG 560 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl----~~~~~~kl~Dfg 560 (618)
+||||+++++|.++++... ....+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||
T Consensus 86 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg 161 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (319)
T ss_dssp EEEECCTTCBHHHHHHSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred EEEeCCCCCCHHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence 9999999999999997432 233489999999999999999999999 99999999999999 777889999999
Q ss_pred ccccCCCCCccccccccccccccCccccc--------cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFAL--------SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+++....... .....||+.|+|||++. +..++.++|||||||++|||++|+.||.
T Consensus 162 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 224 (319)
T 4euu_A 162 AARELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224 (319)
T ss_dssp TCEECCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEE
T ss_pred CceecCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 9987654332 23457999999999986 5778999999999999999999999985
No 85
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1e-36 Score=312.36 Aligned_cols=211 Identities=24% Similarity=0.446 Sum_probs=163.7
Q ss_pred hhhhhhcCCcccceeccCccceEEEEEEcCCc----EEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee
Q 007107 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFANGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479 (618)
Q Consensus 404 ~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 479 (618)
+.....++|...+.||+|+||.||+|.+.... .||+|+++.........+.+.+|++++++++||||+++++++..
T Consensus 17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 96 (323)
T 3qup_A 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR 96 (323)
T ss_dssp TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEEC
T ss_pred hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeec
Confidence 34456678999999999999999999876432 79999998765555667889999999999999999999999987
Q ss_pred CCeE------EEEEEecCCCChhhhhhcccC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC
Q 007107 480 HGQR------LLVYEYVGNGNLHDMLHFADD--SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (618)
Q Consensus 480 ~~~~------~lv~e~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~ 551 (618)
.... ++||||+++|+|.+++..... ....+++..+..++.|++.||+|||++ +|+||||||+|||++++
T Consensus 97 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~ 173 (323)
T 3qup_A 97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAED 173 (323)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTT
T ss_pred cccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCC
Confidence 7655 999999999999999864332 223689999999999999999999999 99999999999999999
Q ss_pred CCcEEeeccccccCCCCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 552 LNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 552 ~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
+.+||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||.
T Consensus 174 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~ 241 (323)
T 3qup_A 174 MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYA 241 (323)
T ss_dssp SCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred CCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence 9999999999976543322 12223457889999999999999999999999999999999 999996
No 86
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.3e-37 Score=319.42 Aligned_cols=206 Identities=26% Similarity=0.388 Sum_probs=176.0
Q ss_pred hhcCCcccceeccCccceEEEEEEc------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (618)
..++|...+.||+|+||.||+|.+. +++.||||+++... .......+.+|+.++++++||||+++++++...+
T Consensus 69 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~ 147 (367)
T 3l9p_A 69 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 147 (367)
T ss_dssp CGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc-ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 4567899999999999999999853 46789999997543 4455667899999999999999999999999999
Q ss_pred eEEEEEEecCCCChhhhhhcccC---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCC---CcE
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL---NPH 555 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~---~~k 555 (618)
..++||||+++|+|.++++..+. ....+++.+++.++.||+.||+|||++ +|+||||||+|||++.++ .+|
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEE
Confidence 99999999999999999975432 235689999999999999999999999 999999999999999554 599
Q ss_pred EeeccccccCCCCC-ccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 556 LSDCGLAALTPNTE-RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 556 l~Dfgl~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
|+|||+++...... ........||+.|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~ 288 (367)
T 3l9p_A 225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYP 288 (367)
T ss_dssp ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999997442111 122234568999999999999999999999999999999998 999996
No 87
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=9.9e-37 Score=306.07 Aligned_cols=204 Identities=26% Similarity=0.395 Sum_probs=164.8
Q ss_pred hhhhcCCcccceeccCccceEEEEEEcC----CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (618)
+...++|+..+.||+|+||.||+|.+.. +..||+|+++... .....+.+.+|+..+++++||||+++++++. .+
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~ 88 (281)
T 1mp8_A 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-EN 88 (281)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SS
T ss_pred EEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cC
Confidence 3455789999999999999999998753 4579999987543 3455678999999999999999999999984 56
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccc
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl 561 (618)
..++||||+++++|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 162 (281)
T 1mp8_A 89 PVWIIMELCTLGELRSFLQV---RKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGL 162 (281)
T ss_dssp SCEEEEECCTTEEHHHHHHH---TTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---
T ss_pred ccEEEEecCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccc
Confidence 78999999999999999963 234689999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 562 AALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
++..............+|+.|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~ 219 (281)
T 1mp8_A 163 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 219 (281)
T ss_dssp ----------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred ccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCC
Confidence 98765443333334567889999999999999999999999999999997 999996
No 88
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=8e-37 Score=314.17 Aligned_cols=198 Identities=18% Similarity=0.252 Sum_probs=173.2
Q ss_pred hcCCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 486 (618)
.++|...+.||+|+||.||+|.. .+|+.||+|.+..... .+.+.+|+++++++ +||||+++++++...+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 83 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMV 83 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEE
Confidence 46789999999999999999986 4689999999864432 23578899999999 999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCC-----cEEeeccc
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN-----PHLSDCGL 561 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~-----~kl~Dfgl 561 (618)
|||+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+
T Consensus 84 ~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~ 156 (330)
T 2izr_A 84 LELL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL 156 (330)
T ss_dssp EECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred EEeC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence 9999 89999999742 45799999999999999999999999 9999999999999998887 99999999
Q ss_pred cccCCCCCcc------ccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNTERQ------VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~ 218 (330)
T 2izr_A 157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 218 (330)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred ceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcc
Confidence 9865433221 1235689999999999999999999999999999999999999996
No 89
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.3e-36 Score=319.40 Aligned_cols=200 Identities=25% Similarity=0.344 Sum_probs=171.6
Q ss_pred hcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC--CCcccccceEEeeCCeEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR--HPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv 486 (618)
.++|...+.||+|+||.||+|...+++.||||++..........+.+.+|++++.+++ ||||+++++++...+..++|
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 4569999999999999999999888999999999766556667788999999999996 59999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|| +.+++|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++...
T Consensus 135 ~E-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EE-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred Ee-cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 99 567899999973 34788999999999999999999999 999999999999996 5799999999998765
Q ss_pred CCCcc-ccccccccccccCcccccc-----------CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQ-VSTQMVGAFGYSAPEFALS-----------GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..... .....+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~ 268 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcch
Confidence 33222 2345679999999999865 468999999999999999999999996
No 90
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.5e-36 Score=302.43 Aligned_cols=201 Identities=26% Similarity=0.397 Sum_probs=179.3
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
..++|+..+.||+|+||.||+|... +|+.||+|++..........+.+.+|++++++++||||+++++++...+..++|
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 3568999999999999999999876 589999999987666666778899999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCC---cEEeeccccc
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN---PHLSDCGLAA 563 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~---~kl~Dfgl~~ 563 (618)
|||+++++|.+.+.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++.
T Consensus 84 ~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 84 FDLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp ECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 999999999988863 35689999999999999999999999 9999999999999986655 9999999997
Q ss_pred cCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
....... .....||+.|+|||++.+..++.++||||||+++|+|++|+.||.
T Consensus 157 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 208 (284)
T 3kk8_A 157 EVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW 208 (284)
T ss_dssp ECCSSCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EcccCcc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCC
Confidence 6653322 234579999999999999999999999999999999999999985
No 91
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.1e-36 Score=330.02 Aligned_cols=205 Identities=25% Similarity=0.466 Sum_probs=180.4
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
.+....+|...+.||+|+||.||+|.+.. +..||||.++..... .+.|.+|++++++++||||+++++++...+..
T Consensus 215 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 291 (495)
T 1opk_A 215 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 291 (495)
T ss_dssp CBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred cccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccc---hHHHHHHHHHHHhcCCCCEeeEEEEEecCCcE
Confidence 34456678899999999999999998875 889999999765432 56789999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++||||+++|+|.++++.. ....+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++
T Consensus 292 ~lv~E~~~~g~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 366 (495)
T 1opk_A 292 YIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSR 366 (495)
T ss_dssp EEEEECCTTCBHHHHHHHS--CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEE
T ss_pred EEEEEccCCCCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccce
Confidence 9999999999999999743 245689999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 564 LTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
..............+++.|+|||++.+..++.++|||||||++|||+| |+.||.
T Consensus 367 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~ 421 (495)
T 1opk_A 367 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP 421 (495)
T ss_dssp CCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred eccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCC
Confidence 765443333334567789999999999999999999999999999999 999985
No 92
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.9e-36 Score=312.94 Aligned_cols=207 Identities=26% Similarity=0.363 Sum_probs=179.9
Q ss_pred ceeehhhhhhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-----CCccc
Q 007107 398 TSYTVASLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-----HPNIV 471 (618)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv 471 (618)
..+.........++|...+.||+|+||.||+|... +++.||+|+++.. ......+..|+++++.++ ||||+
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI---KKYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---HHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc---hhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 34556666777889999999999999999999875 5889999999742 334556777888888886 99999
Q ss_pred ccceEEeeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC-
Q 007107 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD- 550 (618)
Q Consensus 472 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~- 550 (618)
++++++...+..++||||+ +++|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+|||+++
T Consensus 100 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~ 173 (360)
T 3llt_A 100 KYHGKFMYYDHMCLIFEPL-GPSLYEIITRN--NYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDP 173 (360)
T ss_dssp CEEEEEEETTEEEEEECCC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCT
T ss_pred cccceeeECCeeEEEEcCC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccc
Confidence 9999999999999999999 88999999743 234589999999999999999999999 9999999999999975
Q ss_pred ------------------------CCCcEEeeccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHH
Q 007107 551 ------------------------ELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVM 606 (618)
Q Consensus 551 ------------------------~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il 606 (618)
++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 249 (360)
T 3llt_A 174 YFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVL 249 (360)
T ss_dssp TCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHH
T ss_pred cccccccchhcccccccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCCCccchHHHHHHH
Confidence 7899999999997654322 345789999999999999999999999999999
Q ss_pred HHHHhCCCCCC
Q 007107 607 LELLTGRKPLD 617 (618)
Q Consensus 607 ~elltg~~Pf~ 617 (618)
|||++|+.||.
T Consensus 250 ~ell~g~~pf~ 260 (360)
T 3llt_A 250 AELYTGSLLFR 260 (360)
T ss_dssp HHHHHSSCSCC
T ss_pred HHHHHCCCCCC
Confidence 99999999995
No 93
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=316.95 Aligned_cols=208 Identities=28% Similarity=0.470 Sum_probs=179.8
Q ss_pred hhhhcCCcccceeccCccceEEEEEEc--------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceE
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEFA--------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGY 476 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~ 476 (618)
+...++|...+.||+|+||.||+|.+. .+..||+|+++... .......+.+|+++++++ +||||++++++
T Consensus 65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~ 143 (382)
T 3tt0_A 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGA 143 (382)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc-CHHHHHHHHHHHHHHHHhcCCchhhhheee
Confidence 445678999999999999999999863 24679999997653 445567899999999999 89999999999
Q ss_pred EeeCCeEEEEEEecCCCChhhhhhcccC------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCC
Q 007107 477 CAEHGQRLLVYEYVGNGNLHDMLHFADD------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSA 544 (618)
Q Consensus 477 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~ 544 (618)
+...+..++||||+++|+|.++++.... ....+++..++.++.|++.||+|||+. +|+||||||+
T Consensus 144 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~ 220 (382)
T 3tt0_A 144 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAAR 220 (382)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGG
T ss_pred eccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcc
Confidence 9999999999999999999999975432 124689999999999999999999999 9999999999
Q ss_pred CeeecCCCCcEEeeccccccCCCCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 545 NILLDDELNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 545 NiLl~~~~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
|||+++++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 221 NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~ 295 (382)
T 3tt0_A 221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 295 (382)
T ss_dssp GEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred eEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999986643322 22234567899999999999999999999999999999999 999986
No 94
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.6e-36 Score=306.29 Aligned_cols=202 Identities=25% Similarity=0.363 Sum_probs=167.3
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
.++|...+.||+|+||.||+|... +++.||+|++..... .....+.+.+|++.+++++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 467999999999999999999876 688999999976543 333457889999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+++++|.++++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 113 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 113 MRLINGVDLAAMLRR----QGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EECCCCEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEecCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 999999999999973 35689999999999999999999999 99999999999999999999999999997665
Q ss_pred CCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
...........||+.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 236 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQ 236 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSC
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCC
Confidence 433333344679999999999999999999999999999999999999996
No 95
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.9e-36 Score=325.70 Aligned_cols=196 Identities=26% Similarity=0.382 Sum_probs=158.4
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC-----Ce
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH-----GQ 482 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 482 (618)
.++|...+.||+|+||.||+|.+. +|+.||||++..........+.+.+|++++++++||||+++++++... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 467999999999999999999765 689999999977655666778899999999999999999999998443 57
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccc
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~ 562 (618)
.++||||++ ++|.++++ ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 132 ~~lv~e~~~-~~L~~~~~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFR----TPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp EEEEECCCS-EEHHHHHH----SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeccc-cchhhhcc----cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 899999985 68999886 346799999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCc--------------------------cccccccccccccCcccc-ccCCccccchhhhHHHHHHHHHhC
Q 007107 563 ALTPNTER--------------------------QVSTQMVGAFGYSAPEFA-LSGIYTVKSDVYSFGVVMLELLTG 612 (618)
Q Consensus 563 ~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlG~il~elltg 612 (618)
+....... ......+||+.|+|||++ .+..|+.++|||||||++|||++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 86642211 123456889999999986 456799999999999999999993
No 96
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.6e-36 Score=315.49 Aligned_cols=198 Identities=25% Similarity=0.374 Sum_probs=165.5
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
..++|...+.||+|+||.||++... +++.||+|++...... .+.+.+|+..++.++||||+++++++.+.+..++|
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 94 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI---DENVQREIINHRSLRHPNIVRFKEVILTPTHLAII 94 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS---CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc---cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEE
Confidence 3567999999999999999999876 6899999999754322 35578999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCC--cEEeecccccc
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN--PHLSDCGLAAL 564 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~--~kl~Dfgl~~~ 564 (618)
|||+++|+|.+++.. .+.+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|||+++.
T Consensus 95 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~ 167 (361)
T 3uc3_A 95 MEYASGGELYERICN----AGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKS 167 (361)
T ss_dssp EECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred EEeCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence 999999999999863 35689999999999999999999999 9999999999999987765 99999999974
Q ss_pred CCCCCccccccccccccccCccccccCCcccc-chhhhHHHHHHHHHhCCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVK-SDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwSlG~il~elltg~~Pf~ 617 (618)
.... .......||+.|+|||++.+..++.+ +|||||||++|||++|+.||.
T Consensus 168 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~ 219 (361)
T 3uc3_A 168 SVLH--SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE 219 (361)
T ss_dssp ---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred cccc--CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCC
Confidence 3322 12234579999999999988887655 899999999999999999996
No 97
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.5e-37 Score=319.13 Aligned_cols=202 Identities=26% Similarity=0.381 Sum_probs=173.6
Q ss_pred hcCCcccceeccCccceEEEEEE----cCCcEEEEEEcCcccc--cHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCC
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEF----ANGKIMAVKKIDNAAL--SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHG 481 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 481 (618)
.++|...+.||+|+||.||+|+. .+|+.||+|+++.... .......+.+|+++++++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46799999999999999999987 3689999999875432 112234567788888888 6999999999999999
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccc
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl 561 (618)
..++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQ----RERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred eEEEEeecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCC
Confidence 99999999999999999973 34689999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCccccccccccccccCcccccc--CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNTERQVSTQMVGAFGYSAPEFALS--GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++..............||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 206 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~ 263 (355)
T 1vzo_A 206 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT 263 (355)
T ss_dssp EEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTS
T ss_pred CeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCc
Confidence 98765444444445689999999999986 347899999999999999999999995
No 98
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.8e-36 Score=310.64 Aligned_cols=190 Identities=27% Similarity=0.437 Sum_probs=150.9
Q ss_pred cceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-CCcccccceEEeeCCeEEEEEEecCC
Q 007107 415 EFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLLVYEYVGN 492 (618)
Q Consensus 415 ~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~ 492 (618)
.+.||+|+||.||+|.+. +|+.||+|++... ....+.+|++.++.+. ||||+++++++.+.+..++||||+++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 368999999999999876 5899999998643 3456778999999997 99999999999999999999999999
Q ss_pred CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCC---CcEEeeccccccCCCCC
Q 007107 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL---NPHLSDCGLAALTPNTE 569 (618)
Q Consensus 493 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~---~~kl~Dfgl~~~~~~~~ 569 (618)
|+|.++++. ...+++.++..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||+++......
T Consensus 91 ~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 163 (325)
T 3kn6_A 91 GELFERIKK----KKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN 163 (325)
T ss_dssp CBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--
T ss_pred CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC
Confidence 999999973 46799999999999999999999999 999999999999998765 79999999998664332
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 164 -~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~ 210 (325)
T 3kn6_A 164 -QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQ 210 (325)
T ss_dssp ---------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred -CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCC
Confidence 22334578999999999999999999999999999999999999996
No 99
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=5.6e-36 Score=304.54 Aligned_cols=215 Identities=36% Similarity=0.620 Sum_probs=184.9
Q ss_pred cceeehhhhhhhhcCCccc------ceeccCccceEEEEEEcCCcEEEEEEcCccc--ccHHHHHHHHHHHHHhhcCCCC
Q 007107 397 ATSYTVASLQTATNSFSQE------FLIGEGSLGRVYRAEFANGKIMAVKKIDNAA--LSLQEEDNFLEAVSNMSRLRHP 468 (618)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~------~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~ 468 (618)
...++..++..+++.|... +.||+|+||.||+|.. +++.||+|++.... ......+.+.+|++++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 3457777888888888777 8999999999999987 58899999986532 2234567899999999999999
Q ss_pred cccccceEEeeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeee
Q 007107 469 NIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL 548 (618)
Q Consensus 469 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl 548 (618)
||+++++++...+..++||||+++++|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili 166 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILL 166 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGG-GCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEE
Confidence 99999999999999999999999999999986432 245689999999999999999999999 99999999999999
Q ss_pred cCCCCcEEeeccccccCCCCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 549 DDELNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 549 ~~~~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++++.+||+|||++........ .......||+.|+|||.+.+ .++.++||||||+++|||++|+.||+
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~ 235 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVD 235 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBC
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcc
Confidence 9999999999999976643322 22234579999999998865 58899999999999999999999996
No 100
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.8e-36 Score=321.54 Aligned_cols=200 Identities=26% Similarity=0.370 Sum_probs=171.2
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC-----Ce
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH-----GQ 482 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 482 (618)
.++|...+.||+|+||.||+|... +|+.||||++..........+.+.+|++++++++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 568999999999999999999876 488999999987665666778899999999999999999999999776 57
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccc
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~ 562 (618)
.++||||++ ++|.++++ ....+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 105 ~~lv~e~~~-~~L~~~~~----~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFK----TPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEEECCS-EEHHHHHH----SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecCC-cCHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 899999987 59999986 346799999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCc---------------------cccccccccccccCcccc-ccCCccccchhhhHHHHHHHHHhCCCCC
Q 007107 563 ALTPNTER---------------------QVSTQMVGAFGYSAPEFA-LSGIYTVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 563 ~~~~~~~~---------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlG~il~elltg~~Pf 616 (618)
+....... ......+||+.|+|||++ ....|+.++|||||||++|||++|..||
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 87643321 123456899999999986 5567999999999999999999866655
No 101
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.5e-36 Score=315.31 Aligned_cols=195 Identities=27% Similarity=0.397 Sum_probs=166.7
Q ss_pred cccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecC
Q 007107 413 SQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVG 491 (618)
Q Consensus 413 ~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 491 (618)
...+.||+|+||.||+|... +|+.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 169 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG--MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVD 169 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc--cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 34568999999999999875 58999999987543 3456789999999999999999999999999999999999999
Q ss_pred CCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeee--cCCCCcEEeeccccccCCCCC
Q 007107 492 NGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL--DDELNPHLSDCGLAALTPNTE 569 (618)
Q Consensus 492 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl--~~~~~~kl~Dfgl~~~~~~~~ 569 (618)
+++|.+++.. ....+++..+..++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++......
T Consensus 170 ~~~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~ 243 (373)
T 2x4f_A 170 GGELFDRIID---ESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE 243 (373)
T ss_dssp TCEEHHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC
T ss_pred CCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc
Confidence 9999998863 234689999999999999999999999 99999999999999 567889999999998765433
Q ss_pred ccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 570 RQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 570 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 244 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~ 289 (373)
T 2x4f_A 244 K--LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFL 289 (373)
T ss_dssp B--CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred c--cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCC
Confidence 2 233579999999999999999999999999999999999999996
No 102
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.6e-36 Score=301.96 Aligned_cols=200 Identities=30% Similarity=0.485 Sum_probs=178.0
Q ss_pred hcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
.++|...+.||+|+||.||+|.+.+++.||+|++...... .+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTE 83 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEe
Confidence 4678889999999999999999988999999999865433 3578899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|+++++|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 84 FMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp CCTTCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred CCCCCcHHHHHhh---CcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 9999999999963 235689999999999999999999999 9999999999999999999999999999866543
Q ss_pred CccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.........+++.|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~ 207 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 207 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCC
Confidence 3233334567889999999998999999999999999999999 899996
No 103
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=313.38 Aligned_cols=202 Identities=23% Similarity=0.352 Sum_probs=175.9
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccH------HHHHHHHHHHHHhhcCCCCcccccceEEee
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL------QEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 479 (618)
...++|...+.||+|+||.||+|... +++.||+|++....... .....+.+|++++++++||||+++++++.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~ 100 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN 100 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence 34578999999999999999999865 58999999987543211 123457789999999999999999999999
Q ss_pred CCeEEEEEEecCCC-ChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEee
Q 007107 480 HGQRLLVYEYVGNG-NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSD 558 (618)
Q Consensus 480 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~D 558 (618)
.+..++||||+..| +|.++++ ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 101 ~~~~~lv~e~~~~g~~l~~~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~D 173 (335)
T 3dls_A 101 QGFFQLVMEKHGSGLDLFAFID----RHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLID 173 (335)
T ss_dssp SSEEEEEEECCTTSCBHHHHHH----TCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECC
T ss_pred CCEEEEEEEeCCCCccHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEee
Confidence 99999999999777 9999986 345799999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCccccccccccccccCccccccCCc-cccchhhhHHHHHHHHHhCCCCCC
Q 007107 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 559 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
||++........ .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||.
T Consensus 174 fg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 231 (335)
T 3dls_A 174 FGSAAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFC 231 (335)
T ss_dssp CTTCEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCS
T ss_pred cccceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchh
Confidence 999987654322 234679999999999998877 889999999999999999999995
No 104
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.3e-36 Score=304.73 Aligned_cols=205 Identities=29% Similarity=0.446 Sum_probs=178.1
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee--CCeEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE--HGQRLL 485 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~l 485 (618)
.++|+..+.||+|+||.||+|... +|+.||+|++..........+.+.+|++++++++||||+++++++.. .+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467889999999999999999876 68999999998766566677889999999999999999999998754 568999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC-----ceecCCCCCCeeecCCCCcEEeecc
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS-----VVHRNFKSANILLDDELNPHLSDCG 560 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-----iiH~Dlkp~NiLl~~~~~~kl~Dfg 560 (618)
||||+++++|.+++.........+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 9999999999999976544556699999999999999999999998 7 9999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+++...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 162 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 217 (279)
T 2w5a_A 162 LARILNHDT-SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT 217 (279)
T ss_dssp HHHHC---C-HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred hheeecccc-ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCc
Confidence 997664332 22234578999999999999999999999999999999999999996
No 105
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.3e-36 Score=314.67 Aligned_cols=211 Identities=27% Similarity=0.316 Sum_probs=173.3
Q ss_pred hhhhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc---cHHHHHHHHHHHHHhhcCCCCcccccceEEee
Q 007107 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL---SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479 (618)
Q Consensus 404 ~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 479 (618)
++....++|...+.||+|+||.||+|... +++.||+|++..... .....+.+.+|++++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 34566788999999999999999999875 588999999865432 23456789999999999999999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhhcccCC------------------------------------CCCCCHHHHHHHHHHHHH
Q 007107 480 HGQRLLVYEYVGNGNLHDMLHFADDS------------------------------------SKNLTWNARVRVALGTAR 523 (618)
Q Consensus 480 ~~~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------~~~l~~~~~~~i~~~i~~ 523 (618)
.+..++||||+++|+|.++++..... ...+++..++.++.|++.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 99999999999999999988521111 122467788899999999
Q ss_pred HHHHHhhcCCCCceecCCCCCCeeecCCC--CcEEeeccccccCCCC---CccccccccccccccCcccccc--CCcccc
Q 007107 524 ALEYLHEVCLPSVVHRNFKSANILLDDEL--NPHLSDCGLAALTPNT---ERQVSTQMVGAFGYSAPEFALS--GIYTVK 596 (618)
Q Consensus 524 ~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~--~~kl~Dfgl~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~--~~~~~~ 596 (618)
||+|||+. +|+||||||+||+++.++ .+||+|||+++..... .........||+.|+|||++.+ ..++.+
T Consensus 180 ~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 99999999 999999999999998776 8999999999754321 1122345679999999999975 678999
Q ss_pred chhhhHHHHHHHHHhCCCCCC
Q 007107 597 SDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 597 ~DvwSlG~il~elltg~~Pf~ 617 (618)
+|||||||++|||++|+.||.
T Consensus 257 ~DiwslG~il~el~~g~~pf~ 277 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFP 277 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSC
T ss_pred HHHHHHHHHHHHHHHCCCCCC
Confidence 999999999999999999995
No 106
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-36 Score=314.15 Aligned_cols=196 Identities=23% Similarity=0.367 Sum_probs=168.6
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC------
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG------ 481 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 481 (618)
.++|...+.||+|+||.||+|... +|+.||+|++..........+.+.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 467999999999999999999875 5899999999766555566778999999999999999999999997653
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccc
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl 561 (618)
..++||||+ +++|.++++. ..+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 469999999 7899999862 4689999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.
T Consensus 175 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 227 (367)
T 1cm8_A 175 ARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFK 227 (367)
T ss_dssp CEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred ccccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCC
Confidence 9875432 234678999999999987 679999999999999999999999996
No 107
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=4.1e-36 Score=299.50 Aligned_cols=198 Identities=20% Similarity=0.367 Sum_probs=174.3
Q ss_pred hhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC--CeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 485 (618)
..++|...+.||+|+||.||+|.+. ++.||+|+++.........+.+.+|++++++++||||+++++++.+. +..++
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 8 DFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred CHHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 3467888999999999999999985 88999999987766667778899999999999999999999999887 78899
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--ceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS--VVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
||||+++|+|.++++.. ....+++..+..++.|++.||+|||+. + |+||||||+||++++++.++|+|||++.
T Consensus 87 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~ 161 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEG--TNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKF 161 (271)
T ss_dssp EEECCTTCBHHHHHHSC--SSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCC
T ss_pred eecccCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEecccee
Confidence 99999999999999732 233689999999999999999999998 7 9999999999999999999999998875
Q ss_pred cCCCCCccccccccccccccCccccccCCccc---cchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTERQVSTQMVGAFGYSAPEFALSGIYTV---KSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... ....||+.|+|||++.+..++. ++||||||+++|||++|+.||.
T Consensus 162 ~~~~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 212 (271)
T 3kmu_A 162 SFQS------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFA 212 (271)
T ss_dssp TTSC------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTT
T ss_pred eecc------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 4322 2346899999999998766544 7999999999999999999996
No 108
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.9e-36 Score=305.60 Aligned_cols=196 Identities=27% Similarity=0.420 Sum_probs=164.7
Q ss_pred hhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhc--CCCCcccccceEEeeC----C
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR--LRHPNIVTLAGYCAEH----G 481 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~----~ 481 (618)
..++|...+.||+|+||.||+|.+ +|+.||+|++.... ...+..|.+++.. ++||||+++++++... .
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~ 79 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD-----EKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG-----HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc-----chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence 456899999999999999999988 68999999986432 3445555555554 7999999999987553 4
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCCceecCCCCCCeeecCCCC
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH--------EVCLPSVVHRNFKSANILLDDELN 553 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~iiH~Dlkp~NiLl~~~~~ 553 (618)
..++||||+++|+|.++++ ...+++..+..++.|++.||+||| +. +|+||||||+|||++.++.
T Consensus 80 ~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~ 151 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQ 151 (301)
T ss_dssp EEEEEECCCTTCBHHHHHT-----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSC
T ss_pred eeEEehhhccCCCHHHHHh-----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCC
Confidence 5899999999999999995 357999999999999999999999 77 9999999999999999999
Q ss_pred cEEeeccccccCCCCCccc---cccccccccccCccccccC------CccccchhhhHHHHHHHHHhC----------CC
Q 007107 554 PHLSDCGLAALTPNTERQV---STQMVGAFGYSAPEFALSG------IYTVKSDVYSFGVVMLELLTG----------RK 614 (618)
Q Consensus 554 ~kl~Dfgl~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlG~il~elltg----------~~ 614 (618)
+||+|||+++......... .....||+.|+|||++.+. .++.++|||||||++|||+|| +.
T Consensus 152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~ 231 (301)
T 3q4u_A 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 231 (301)
T ss_dssp EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccc
Confidence 9999999997654332221 2234799999999999877 566899999999999999999 88
Q ss_pred CCC
Q 007107 615 PLD 617 (618)
Q Consensus 615 Pf~ 617 (618)
||.
T Consensus 232 pf~ 234 (301)
T 3q4u_A 232 PFY 234 (301)
T ss_dssp TTT
T ss_pred ccc
Confidence 884
No 109
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.2e-36 Score=338.38 Aligned_cols=202 Identities=22% Similarity=0.348 Sum_probs=176.3
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 484 (618)
..++|+..+.||+|+||.||+|+.. +++.||||+++.... .......+..|..++..+ +||+|+++++++.+.+..+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4567999999999999999999876 488899999975422 222345677888888887 7999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||+++|+|.++++. .+.+++..++.++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++.
T Consensus 419 lV~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEEeCcCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 99999999999999973 35689999999999999999999999 999999999999999999999999999986
Q ss_pred CCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..... ......+||+.|+|||++.+..|+.++|||||||++|||++|+.||.
T Consensus 492 ~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~ 543 (674)
T 3pfq_A 492 NIWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543 (674)
T ss_dssp CCCTT-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cccCC-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCC
Confidence 43322 23345789999999999999999999999999999999999999996
No 110
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.4e-36 Score=325.65 Aligned_cols=203 Identities=32% Similarity=0.528 Sum_probs=171.4
Q ss_pred hhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
+...++|...+.||+|+||.||+|.+.++..||||+++..... .+.|.+|++++++++||||+++++++.+ +..++
T Consensus 180 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~i 255 (452)
T 1fmk_A 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 255 (452)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred ccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEE
Confidence 4456778899999999999999999988889999999865433 4578999999999999999999999876 67899
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+++|+|.++++.. ....+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++..
T Consensus 256 v~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 330 (452)
T 1fmk_A 256 VTEYMSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLI 330 (452)
T ss_dssp EECCCTTCBHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC--
T ss_pred EehhhcCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceec
Confidence 99999999999999632 234589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
............+|+.|+|||++.+..++.++|||||||++|||+| |+.||.
T Consensus 331 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~ 383 (452)
T 1fmk_A 331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP 383 (452)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred CCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCC
Confidence 5433333334567889999999999999999999999999999999 999985
No 111
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3e-36 Score=303.22 Aligned_cols=203 Identities=29% Similarity=0.359 Sum_probs=172.0
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
..++|...+.||+|+||.||+|... +++.+|+|++..... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 98 (285)
T 3is5_A 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV 98 (285)
T ss_dssp HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc-chhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEE
Confidence 3467889999999999999999875 588999999875542 22356788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeee---cCCCCcEEeeccccc
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL---DDELNPHLSDCGLAA 563 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl---~~~~~~kl~Dfgl~~ 563 (618)
|||+++|+|.+++.........+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++.
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 999999999998865444457799999999999999999999999 99999999999999 456789999999997
Q ss_pred cCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
...... ......||+.|+|||++. ..++.++||||||+++|||++|+.||.
T Consensus 176 ~~~~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~ 226 (285)
T 3is5_A 176 LFKSDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFT 226 (285)
T ss_dssp C------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred ecCCcc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCC
Confidence 654332 223457999999999885 568999999999999999999999996
No 112
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=5.3e-36 Score=308.16 Aligned_cols=201 Identities=24% Similarity=0.409 Sum_probs=173.4
Q ss_pred hcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.++|+..+.||+|+||.||+|.... |+.||+|++..........+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 4678999999999999999998764 899999998766656666777899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++++|.++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 104 e~~~~~~l~~~~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 104 EFVDHTILDDLEL----FPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp ECCSEEHHHHHHH----STTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred ecCCcchHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 9999999988765 345699999999999999999999999 999999999999999999999999999976543
Q ss_pred CCccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. .......||+.|+|||++.+. .++.++|||||||++|||++|+.||.
T Consensus 177 ~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 226 (331)
T 4aaa_A 177 PG-EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFP 226 (331)
T ss_dssp --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred Cc-cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCC
Confidence 32 222345789999999999875 78999999999999999999999996
No 113
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.8e-36 Score=315.85 Aligned_cols=204 Identities=20% Similarity=0.293 Sum_probs=168.8
Q ss_pred hhhcCCcccceeccCccceEEEEEEcC------CcEEEEEEcCcccccHHHH---------HHHHHHHHHhhcCCCCccc
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEE---------DNFLEAVSNMSRLRHPNIV 471 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~---------~~~~~e~~~l~~l~h~niv 471 (618)
...++|...+.||+|+||.||+|.+.+ ++.||+|++.........+ ..+..|+..+..++||||+
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv 111 (364)
T 3op5_A 32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP 111 (364)
T ss_dssp TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSC
T ss_pred cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCC
Confidence 345689999999999999999998765 4789999986543221111 1234556677888999999
Q ss_pred ccceEEeeC----CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCee
Q 007107 472 TLAGYCAEH----GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANIL 547 (618)
Q Consensus 472 ~l~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiL 547 (618)
++++++... ...++||||+ +++|.++++. ....+++..+..++.||+.||+|||+. +|+||||||+|||
T Consensus 112 ~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~---~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nil 184 (364)
T 3op5_A 112 KYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA---NAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLL 184 (364)
T ss_dssp CEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred eEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEE
Confidence 999998765 4589999999 9999999963 346799999999999999999999999 9999999999999
Q ss_pred ec--CCCCcEEeeccccccCCCCCcc------ccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 548 LD--DELNPHLSDCGLAALTPNTERQ------VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 548 l~--~~~~~kl~Dfgl~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++ .++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||+||+.||+
T Consensus 185 l~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~ 262 (364)
T 3op5_A 185 LNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWE 262 (364)
T ss_dssp EESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 99 8899999999999765432211 1133469999999999999999999999999999999999999996
No 114
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=2.5e-36 Score=305.37 Aligned_cols=202 Identities=26% Similarity=0.442 Sum_probs=170.6
Q ss_pred hhcCCcccceeccCccceEEEEEE-----cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC--
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEF-----ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH-- 480 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-- 480 (618)
..++|+..+.||+|+||.||+|++ .+++.||+|++... .....+.+.+|++++++++||||+++++++...
T Consensus 8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 85 (295)
T 3ugc_A 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 85 (295)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH
T ss_pred CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 356788999999999999999984 25899999999754 344567899999999999999999999998654
Q ss_pred CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecc
Q 007107 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (618)
Q Consensus 481 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfg 560 (618)
...++||||+++|+|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg 159 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFG 159 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred CceEEEEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCc
Confidence 5689999999999999999742 34589999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCc--cccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTER--QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+++....... .......++..|+|||++.+..++.++||||||+++|||+||..||.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~ 218 (295)
T 3ugc_A 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 218 (295)
T ss_dssp SCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTC
T ss_pred ccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccC
Confidence 9987643322 12223457888999999999999999999999999999999999875
No 115
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.7e-36 Score=299.50 Aligned_cols=200 Identities=28% Similarity=0.473 Sum_probs=153.0
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCccccc-HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
.++|+..+.||+|+||.||+|.+. +|+.||+|++...... ....+.+.+|++.+++++||||+++++++.+.+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 357999999999999999999865 6899999998765432 22356788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+ ++++.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++....
T Consensus 92 ~e~~-~~~l~~~~~----~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 163 (275)
T 2eue_A 92 IEYA-GNELFDYIV----QRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp EECC-CEEHHHHHH----TSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC----
T ss_pred ehhc-CCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceecc
Confidence 9999 668888775 345689999999999999999999999 99999999999999999999999999997654
Q ss_pred CCCccccccccccccccCccccccCCc-cccchhhhHHHHHHHHHhCCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLDR 618 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~Pf~~ 618 (618)
... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||+.
T Consensus 164 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 214 (275)
T 2eue_A 164 DGN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214 (275)
T ss_dssp -------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCC
T ss_pred Ccc--cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 322 2234579999999999988776 7899999999999999999999963
No 116
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4.8e-36 Score=307.14 Aligned_cols=201 Identities=23% Similarity=0.335 Sum_probs=177.2
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccH----HHHHHHHHHHHHhhcCCCCcccccceEEeeCCe
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL----QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (618)
..++|...+.||+|+||.||+|... +|+.||+|.+....... ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 4567899999999999999999876 58999999987543221 135678999999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCC----CcEEee
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL----NPHLSD 558 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~----~~kl~D 558 (618)
.++||||+++++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|
T Consensus 90 ~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~D 162 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLA----QKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162 (321)
T ss_dssp EEEEECCCCSCBHHHHHH----TCSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred EEEEEEcCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEcc
Confidence 999999999999999996 345789999999999999999999999 999999999999999887 799999
Q ss_pred ccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 559 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
||++........ .....||+.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 163 fg~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 219 (321)
T 2a2a_A 163 FGLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219 (321)
T ss_dssp CTTCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSC
T ss_pred CccceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCC
Confidence 999987654322 234579999999999999999999999999999999999999995
No 117
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=4.7e-36 Score=310.29 Aligned_cols=198 Identities=33% Similarity=0.487 Sum_probs=172.9
Q ss_pred hhcCCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
..+.|...+.||+|+||.||+|.. .+|+.||+|++..... .....+.+.+|++++++++||||+++++++...+..++
T Consensus 52 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 131 (348)
T 1u5q_A 52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL 131 (348)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEE
Confidence 345688889999999999999986 4689999999865432 23345678999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+. |+|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||++...
T Consensus 132 v~e~~~-g~l~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 204 (348)
T 1u5q_A 132 VMEYCL-GSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIM 204 (348)
T ss_dssp EEECCS-EEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSS
T ss_pred EEecCC-CCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceec
Confidence 999997 688887753 245789999999999999999999999 9999999999999999999999999999765
Q ss_pred CCCCccccccccccccccCccccc---cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... ....||+.|+|||++. ...++.++|||||||++|||++|+.||.
T Consensus 205 ~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~ 254 (348)
T 1u5q_A 205 APA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 254 (348)
T ss_dssp SSB-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred CCC-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 432 2357999999999985 5678999999999999999999999985
No 118
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.6e-36 Score=301.58 Aligned_cols=204 Identities=30% Similarity=0.502 Sum_probs=177.5
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
.+...++|...+.||+|+||.||+|...+++.||+|++...... .+.+.+|++++++++||||+++++++. .+..+
T Consensus 8 ~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~ 83 (279)
T 1qpc_A 8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIY 83 (279)
T ss_dssp TBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred cccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCccc---HHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcE
Confidence 44556789999999999999999999988889999999765433 467889999999999999999999886 45689
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||+++++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++..
T Consensus 84 ~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 158 (279)
T 1qpc_A 84 IITEYMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARL 158 (279)
T ss_dssp EEEECCTTCBHHHHTTSH--HHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEecCCCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCccccc
Confidence 999999999999999632 123689999999999999999999999 999999999999999999999999999987
Q ss_pred CCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.............+++.|+|||.+.+..++.++||||||+++|||++ |+.||.
T Consensus 159 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 212 (279)
T 1qpc_A 159 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 212 (279)
T ss_dssp CSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred ccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCc
Confidence 65443333344567889999999998999999999999999999999 999985
No 119
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=4.1e-36 Score=301.16 Aligned_cols=200 Identities=30% Similarity=0.460 Sum_probs=172.8
Q ss_pred hhcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCccccc-HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
..++|...+.||+|+||.||+|.... ++.||+|++...... ......+.+|++++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 45678999999999999999997764 778999998654322 1224678899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 87 v~e~~~~~~l~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp EECCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 9999999999999863 35689999999999999999999999 9999999999999999999999999998654
Q ss_pred CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||+
T Consensus 160 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 208 (279)
T 3fdn_A 160 PSSR---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208 (279)
T ss_dssp -----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTC
T ss_pred Cccc---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCC
Confidence 3322 234578999999999999999999999999999999999999996
No 120
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=5.7e-36 Score=304.66 Aligned_cols=203 Identities=29% Similarity=0.409 Sum_probs=166.6
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccH---HHHHHHHHHHHHhhcC---CCCcccccceEEee
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL---QEEDNFLEAVSNMSRL---RHPNIVTLAGYCAE 479 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~---~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~ 479 (618)
...++|+..+.||+|+||.||+|... +|+.||+|++....... .....+.+|+++++++ +||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 34678999999999999999999864 68999999986433111 1123445566555554 59999999999987
Q ss_pred CC-----eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCc
Q 007107 480 HG-----QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNP 554 (618)
Q Consensus 480 ~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~ 554 (618)
.. ..++||||++ ++|.++++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 159 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKA--PPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTV 159 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTC--CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCE
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCE
Confidence 65 5799999997 5999998732 234489999999999999999999999 99999999999999999999
Q ss_pred EEeeccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 555 HLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 555 kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 160 kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 220 (308)
T 3g33_A 160 KLADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 220 (308)
T ss_dssp EECSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCC
T ss_pred EEeeCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCC
Confidence 999999998664332 2245689999999999999999999999999999999999999995
No 121
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=4.9e-36 Score=305.74 Aligned_cols=208 Identities=28% Similarity=0.455 Sum_probs=179.5
Q ss_pred hhhhcCCcccceeccCccceEEEEEE------cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEe
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEF------ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCA 478 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 478 (618)
+...++|...+.||+|+||.||+|.+ .+++.||+|+++... .....+.+.+|+++++++ +||||+++++++.
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 97 (313)
T 1t46_A 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLGACT 97 (313)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence 44567899999999999999999975 246889999997543 334567899999999999 8999999999999
Q ss_pred eCCeEEEEEEecCCCChhhhhhcccC--------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCC
Q 007107 479 EHGQRLLVYEYVGNGNLHDMLHFADD--------------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSA 544 (618)
Q Consensus 479 ~~~~~~lv~e~~~~gsL~~~l~~~~~--------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~ 544 (618)
..+..++||||+++|+|.++++.... ....+++..++.++.|++.||+|||+. +|+||||||+
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~ 174 (313)
T 1t46_A 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAAR 174 (313)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGG
T ss_pred cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccc
Confidence 99999999999999999999975321 123589999999999999999999999 9999999999
Q ss_pred CeeecCCCCcEEeeccccccCCCCCcc-ccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 545 NILLDDELNPHLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 545 NiLl~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
||+++.++.+||+|||++......... ......||+.|+|||++.+..++.++||||||+++|||+| |+.||.
T Consensus 175 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 249 (313)
T 1t46_A 175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP 249 (313)
T ss_dssp GEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred eEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999876544322 2234567889999999999999999999999999999999 999986
No 122
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=3.6e-36 Score=303.30 Aligned_cols=203 Identities=32% Similarity=0.512 Sum_probs=165.8
Q ss_pred hhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
+...++|...+.||+|+||.||+|.+. ..+|+|+++.........+.+.+|++++++++||||+++++++ ..+..++
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~l 96 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAI 96 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEE
T ss_pred ccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEE
Confidence 455678999999999999999999864 4599999987766677778899999999999999999999965 4567899
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+++++|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 97 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 170 (289)
T 3og7_A 97 VTQWCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEK 170 (289)
T ss_dssp EEECCCEEEHHHHHTT---C---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred EEEecCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccc
Confidence 9999999999999863 345689999999999999999999999 9999999999999999999999999999755
Q ss_pred CCCC-ccccccccccccccCccccc---cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTE-RQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... ........||+.|+|||++. +..++.++||||||+++|||++|+.||.
T Consensus 171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 226 (289)
T 3og7_A 171 SRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYS 226 (289)
T ss_dssp -------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTS
T ss_pred ccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCcc
Confidence 4321 22233457999999999987 5678899999999999999999999996
No 123
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=3e-36 Score=309.66 Aligned_cols=202 Identities=22% Similarity=0.342 Sum_probs=164.7
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
...++|...+.||+|+||.||+|... +++.||+|+++...........+.+|++++++++||||+++++++.+.+..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 34567999999999999999999765 68999999998665554456678899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeec-----CCCCcEEeecc
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD-----DELNPHLSDCG 560 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~-----~~~~~kl~Dfg 560 (618)
||||++ |+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++ +++.+||+|||
T Consensus 111 v~e~~~-~~L~~~~~~----~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg 182 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDK----NPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFG 182 (329)
T ss_dssp EEECCS-EEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred EEecCC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCC
Confidence 999998 599998863 45689999999999999999999999 999999999999994 45569999999
Q ss_pred ccccCCCCCccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+++....... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.
T Consensus 183 ~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 239 (329)
T 3gbz_A 183 LARAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFP 239 (329)
T ss_dssp HHHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CccccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence 9976543222 22345789999999999875 48999999999999999999999996
No 124
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=3e-36 Score=303.51 Aligned_cols=205 Identities=25% Similarity=0.463 Sum_probs=182.2
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
.+...++|...+.||+|+||.||+|.+.. ++.||+|.+.... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 8 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 84 (288)
T 3kfa_A 8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 84 (288)
T ss_dssp TBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS---THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred ccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCE
Confidence 44566789999999999999999998875 8899999997543 3456789999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++||||+++++|.++++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 85 ~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~ 159 (288)
T 3kfa_A 85 YIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR 159 (288)
T ss_dssp EEEEECCTTEEHHHHHHHC--CTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGG
T ss_pred EEEEEcCCCCcHHHHHHhc--ccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccce
Confidence 9999999999999999742 345689999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 564 LTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
..............+|+.|+|||++.+..++.++||||||+++|+|++ |+.||.
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~ 214 (288)
T 3kfa_A 160 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP 214 (288)
T ss_dssp TSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred eccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 776554444445678889999999999999999999999999999999 999986
No 125
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.7e-36 Score=299.92 Aligned_cols=203 Identities=30% Similarity=0.457 Sum_probs=156.3
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCccccc-HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
..++|...+.||+|+||.||+|... +|+.||+|.+...... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 3467899999999999999999874 6899999998643321 1124678899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+++++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 89 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 162 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKN---RVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQL 162 (278)
T ss_dssp EEECCTTEEHHHHHHT---CSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEecCCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeec
Confidence 9999999999999863 235789999999999999999999999 9999999999999999999999999999766
Q ss_pred CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||+
T Consensus 163 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 213 (278)
T 3cok_A 163 KMPHE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213 (278)
T ss_dssp C-----------------------------CTHHHHHHHHHHHHHHSSCSSC
T ss_pred cCCCC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 43222 1223578999999999999999999999999999999999999996
No 126
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.3e-35 Score=299.95 Aligned_cols=202 Identities=22% Similarity=0.382 Sum_probs=178.4
Q ss_pred hhcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
..++|...+.||+|+||.||+|...+ ++.+|+|.+..... .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 45678899999999999999998864 78899999865432 34456788999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 93 v~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 165 (294)
T 2rku_A 93 VLELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165 (294)
T ss_dssp EEECCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceec
Confidence 9999999999998863 35689999999999999999999999 9999999999999999999999999999766
Q ss_pred CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||+
T Consensus 166 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~ 216 (294)
T 2rku_A 166 EYDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216 (294)
T ss_dssp CSTTC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred ccCcc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 43222 2234579999999999999999999999999999999999999996
No 127
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=6.4e-36 Score=300.78 Aligned_cols=202 Identities=22% Similarity=0.299 Sum_probs=176.0
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 485 (618)
..++|+..+.||+|+||.||+|... +++.||+|++............+.+|+..+.++ +||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4567999999999999999999876 699999999987655556677888999999988 99999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC--------------
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE-------------- 551 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~-------------- 551 (618)
||||+++++|.++++........+++..+..++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 9999999999999975443446789999999999999999999999 99999999999999844
Q ss_pred -----CCcEEeeccccccCCCCCccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 552 -----LNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 552 -----~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..+||+|||.+....... ...||+.|+|||++.+. .++.++|||||||++|||++|+.|+.
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~ 232 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPR 232 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCS
T ss_pred ccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCc
Confidence 479999999997765432 23589999999999876 56789999999999999999998764
No 128
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1e-35 Score=297.63 Aligned_cols=201 Identities=27% Similarity=0.422 Sum_probs=175.9
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.++|+..+.||+|+||.||+|... +++.||+|++..... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC-TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc-hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 457889999999999999999876 689999999865432 234577899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||+++++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.....
T Consensus 85 e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 157 (276)
T 2yex_A 85 EYCSGGELFDRIE----PDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (276)
T ss_dssp ECCTTEEGGGGSB----TTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EecCCCcHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCC
Confidence 9999999999885 345689999999999999999999999 999999999999999999999999999976532
Q ss_pred CC-ccccccccccccccCccccccCCc-cccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TE-RQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~-~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. ........||+.|+|||++.+..+ +.++||||||+++|||++|+.||+
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 209 (276)
T 2yex_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209 (276)
T ss_dssp TTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCS
T ss_pred CcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCC
Confidence 22 122334579999999999988775 789999999999999999999996
No 129
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3.6e-36 Score=300.14 Aligned_cols=201 Identities=33% Similarity=0.537 Sum_probs=163.3
Q ss_pred hhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccH--HHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSL--QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
..++|+..+.||+|+||.||+|.+. |+.||+|+++...... ...+.+.+|+++++.++||||+++++++...+..++
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (271)
T 3dtc_A 5 DFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL 83 (271)
T ss_dssp CTTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred chhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence 3467889999999999999999975 8999999987543221 224678899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC--------CCCcEEe
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD--------ELNPHLS 557 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~--------~~~~kl~ 557 (618)
||||+++++|.++++ ...+++..+..++.|++.||+|||+....+|+||||||+||+++. ++.+||+
T Consensus 84 v~e~~~~~~L~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~ 158 (271)
T 3dtc_A 84 VMEFARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158 (271)
T ss_dssp EEECCTTEEHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC
T ss_pred EEEcCCCCCHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEc
Confidence 999999999999985 457899999999999999999999992222999999999999986 6789999
Q ss_pred eccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 558 DCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 558 Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|||++........ ....||+.|+|||.+.+..++.++||||||+++|||++|+.||.
T Consensus 159 Dfg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~ 215 (271)
T 3dtc_A 159 DFGLAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFR 215 (271)
T ss_dssp CCCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTT
T ss_pred cCCcccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 9999976543222 24579999999999999999999999999999999999999996
No 130
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-36 Score=311.41 Aligned_cols=209 Identities=28% Similarity=0.461 Sum_probs=175.5
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEc------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEE
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYC 477 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 477 (618)
.+...++|...+.||+|+||.||+|.+. +++.||+|.+.... .....+.+.+|++++.++ +||||+++++++
T Consensus 40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 118 (344)
T 1rjb_A 40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGAC 118 (344)
T ss_dssp GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 3445678999999999999999999862 46689999997543 233457789999999999 899999999999
Q ss_pred eeCCeEEEEEEecCCCChhhhhhcccCC-------------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 007107 478 AEHGQRLLVYEYVGNGNLHDMLHFADDS-------------------SKNLTWNARVRVALGTARALEYLHEVCLPSVVH 538 (618)
Q Consensus 478 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH 538 (618)
...+..++||||+++|+|.+++...... ...+++..++.++.||+.||+|||+. +|+|
T Consensus 119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH 195 (344)
T 1rjb_A 119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVH 195 (344)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Cccc
Confidence 9999999999999999999999743211 13479999999999999999999999 9999
Q ss_pred cCCCCCCeeecCCCCcEEeeccccccCCCCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCC
Q 007107 539 RNFKSANILLDDELNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPL 616 (618)
Q Consensus 539 ~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf 616 (618)
|||||+|||++.++.+||+|||++........ .......||+.|+|||++.+..++.++||||||+++|||+| |+.||
T Consensus 196 ~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 275 (344)
T 1rjb_A 196 RDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275 (344)
T ss_dssp TTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred CCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCc
Confidence 99999999999999999999999976543322 22334568889999999999999999999999999999998 99999
Q ss_pred C
Q 007107 617 D 617 (618)
Q Consensus 617 ~ 617 (618)
.
T Consensus 276 ~ 276 (344)
T 1rjb_A 276 P 276 (344)
T ss_dssp T
T ss_pred c
Confidence 6
No 131
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.7e-35 Score=298.51 Aligned_cols=198 Identities=26% Similarity=0.392 Sum_probs=173.2
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee----CCeE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE----HGQR 483 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~ 483 (618)
.+.|...+.||+|+||.||+|... ++..||+|.+..........+.+.+|++++++++||||+++++++.. ....
T Consensus 25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 345777889999999999999875 57889999998776667778889999999999999999999999875 3468
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--ceecCCCCCCeeec-CCCCcEEeecc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS--VVHRNFKSANILLD-DELNPHLSDCG 560 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--iiH~Dlkp~NiLl~-~~~~~kl~Dfg 560 (618)
++||||+++++|.++++. ...+++..+..++.|++.||+|||+. + |+||||||+||+++ +++.+||+|||
T Consensus 105 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg 177 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLG 177 (290)
T ss_dssp EEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTT
T ss_pred EEEEEecCCCCHHHHHHH----ccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCC
Confidence 999999999999999963 35689999999999999999999998 7 99999999999998 78999999999
Q ss_pred ccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++....... .....||+.|+|||++. ..++.++||||||+++|+|++|+.||.
T Consensus 178 ~~~~~~~~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~ 230 (290)
T 1t4h_A 178 LATLKRASF---AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYS 230 (290)
T ss_dssp GGGGCCTTS---BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred Ccccccccc---cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCC
Confidence 997654322 23457999999999886 458999999999999999999999996
No 132
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=9.1e-36 Score=303.86 Aligned_cols=212 Identities=25% Similarity=0.449 Sum_probs=170.6
Q ss_pred hhhhhhhcCCcccceeccCccceEEEEEEc----CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEe
Q 007107 403 ASLQTATNSFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCA 478 (618)
Q Consensus 403 ~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 478 (618)
.......++|...+.||+|+||.||+|.+. .++.||+|+++.........+.+.+|++++++++||||+++++++.
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence 344556678999999999999999999765 2458999999876666666788999999999999999999999998
Q ss_pred eCC-----eEEEEEEecCCCChhhhhhccc--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC
Q 007107 479 EHG-----QRLLVYEYVGNGNLHDMLHFAD--DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (618)
Q Consensus 479 ~~~-----~~~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~ 551 (618)
..+ ..++||||+++|+|.+++.... .....+++..++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDD 183 (313)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTT
T ss_pred eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCC
Confidence 765 3499999999999999985332 2346799999999999999999999999 99999999999999999
Q ss_pred CCcEEeeccccccCCCCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 552 LNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 552 ~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
+.+||+|||++........ .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 251 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYP 251 (313)
T ss_dssp SCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred CcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCc
Confidence 9999999999976543322 12233467889999999999999999999999999999999 999985
No 133
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.2e-35 Score=306.12 Aligned_cols=202 Identities=22% Similarity=0.382 Sum_probs=178.7
Q ss_pred hhcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
..++|...+.||+|+||.||++...+ ++.||+|++..... .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 45678999999999999999998764 78899999865432 34456778999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+++++|.+++.. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 119 v~e~~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 191 (335)
T 2owb_A 119 VLELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191 (335)
T ss_dssp EECCCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEecCCCCCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceec
Confidence 9999999999998863 35689999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||+
T Consensus 192 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 242 (335)
T 2owb_A 192 EYDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242 (335)
T ss_dssp CSTTC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred ccCcc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCC
Confidence 43222 2234579999999999999999999999999999999999999996
No 134
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=5e-36 Score=307.07 Aligned_cols=214 Identities=24% Similarity=0.402 Sum_probs=182.4
Q ss_pred eehhhhhhhhcCCcccceeccCccceEEEEEEc------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCccccc
Q 007107 400 YTVASLQTATNSFSQEFLIGEGSLGRVYRAEFA------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTL 473 (618)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 473 (618)
+...+++...++|...+.||+|+||.||+|.+. .++.||+|.+.... .......+.+|++++++++||||+++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~ 93 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRL 93 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCCEeee
Confidence 334456667789999999999999999999764 36889999997543 34456678999999999999999999
Q ss_pred ceEEeeCCeEEEEEEecCCCChhhhhhcccC------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCee
Q 007107 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADD------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANIL 547 (618)
Q Consensus 474 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiL 547 (618)
++++.+.+..++||||+++|+|.++++.... ....+++..++.++.|++.||+|||++ +|+||||||+||+
T Consensus 94 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIl 170 (322)
T 1p4o_A 94 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 170 (322)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEE
T ss_pred EEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEE
Confidence 9999999999999999999999999864321 124578999999999999999999999 9999999999999
Q ss_pred ecCCCCcEEeeccccccCCCCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 548 LDDELNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 548 l~~~~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 171 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 242 (322)
T 1p4o_A 171 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 242 (322)
T ss_dssp ECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTT
T ss_pred EcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccc
Confidence 99999999999999975533221 12233467889999999999999999999999999999999 899986
No 135
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1e-35 Score=297.87 Aligned_cols=198 Identities=28% Similarity=0.378 Sum_probs=174.1
Q ss_pred hhcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
..++|...+.||+|+||.||+|.... ++.+|+|++...... ..+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE--DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 45678999999999999999998764 778999998754332 356788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeee---cCCCCcEEeeccccc
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL---DDELNPHLSDCGLAA 563 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl---~~~~~~kl~Dfgl~~ 563 (618)
|||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++.
T Consensus 85 ~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~ 157 (277)
T 3f3z_A 85 MELCTGGELFERVVH----KRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA 157 (277)
T ss_dssp EECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EeccCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccce
Confidence 999999999998863 35689999999999999999999999 99999999999999 788999999999997
Q ss_pred cCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
...... ......||+.|+|||++.+. ++.++||||||+++|||++|+.||.
T Consensus 158 ~~~~~~--~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~ 208 (277)
T 3f3z_A 158 RFKPGK--MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFS 208 (277)
T ss_dssp ECCTTS--CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred eccCcc--chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCC
Confidence 665332 22345799999999998654 8999999999999999999999996
No 136
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.9e-36 Score=309.49 Aligned_cols=201 Identities=27% Similarity=0.465 Sum_probs=166.1
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCc----EEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGK----IMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
.++|...+.||+|+||.||+|.+. +++ +||+|.+.... .....+.+.+|++++++++||||+++++++... ..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~ 91 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV 91 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-Ce
Confidence 457889999999999999999865 344 35888876433 233457789999999999999999999999875 47
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++|+||+.+|+|.++++. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 92 ~~v~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 92 QLITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEECCTTCBHHHHHHH---STTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred EEEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCccee
Confidence 899999999999999974 345689999999999999999999999 99999999999999999999999999997
Q ss_pred cCCCCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 564 LTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 564 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
....... .......+|+.|+|||++.+..++.++|||||||++|||+| |+.||+
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 221 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred EccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCcc
Confidence 6543322 22233467889999999999999999999999999999999 999996
No 137
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=9.7e-36 Score=306.61 Aligned_cols=207 Identities=29% Similarity=0.484 Sum_probs=177.2
Q ss_pred hhhcCCcccceeccCccceEEEEEEc--------CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA--------NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYC 477 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 477 (618)
...++|...+.||+|+||.||+|.+. +++.||+|+++... .....+.+.+|+++++++ +||||+++++++
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 110 (334)
T 2pvf_A 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110 (334)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC-cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence 34578999999999999999999863 46789999997543 445567889999999999 899999999999
Q ss_pred eeCCeEEEEEEecCCCChhhhhhcccCC------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCC
Q 007107 478 AEHGQRLLVYEYVGNGNLHDMLHFADDS------------SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSAN 545 (618)
Q Consensus 478 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~N 545 (618)
...+..++||||+++|+|.++++..... ...+++..++.++.|++.||+|||+. +|+||||||+|
T Consensus 111 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N 187 (334)
T 2pvf_A 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARN 187 (334)
T ss_dssp CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccce
Confidence 9999999999999999999999753321 23489999999999999999999999 99999999999
Q ss_pred eeecCCCCcEEeeccccccCCCCCcc-ccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 546 ILLDDELNPHLSDCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 546 iLl~~~~~~kl~Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
|+++.++.+||+|||+++........ ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 188 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 261 (334)
T 2pvf_A 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261 (334)
T ss_dssp EEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred EEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcC
Confidence 99999999999999999866543321 2233467889999999999999999999999999999999 999986
No 138
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=9.1e-36 Score=314.02 Aligned_cols=194 Identities=23% Similarity=0.334 Sum_probs=158.9
Q ss_pred cCCccc-ceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHh-hcCCCCcccccceEEee----CCe
Q 007107 410 NSFSQE-FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNM-SRLRHPNIVTLAGYCAE----HGQ 482 (618)
Q Consensus 410 ~~~~~~-~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~~ 482 (618)
++|... +.||+|+||.||+|... +|+.||||++... ..+.+|++++ +..+||||+++++++.. .+.
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~ 133 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 133 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcE
Confidence 456555 68999999999999876 5889999998632 2456677766 44589999999999876 567
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC---CCCcEEeec
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---ELNPHLSDC 559 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~---~~~~kl~Df 559 (618)
.++||||+++|+|.++++.. ....+++..+..++.||+.||+|||+. +|+||||||+|||++. ++.+||+||
T Consensus 134 ~~lv~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DF 208 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 208 (400)
T ss_dssp EEEEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEEeCCCCcHHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEec
Confidence 89999999999999999732 234689999999999999999999999 9999999999999997 789999999
Q ss_pred cccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 560 GLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 560 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|+++...... .....+||+.|+|||++.+..|+.++|||||||++|||++|+.||.
T Consensus 209 G~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 264 (400)
T 1nxk_A 209 GFAKETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 264 (400)
T ss_dssp TTCEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCC
T ss_pred ccccccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCC
Confidence 9998654322 2235679999999999999999999999999999999999999995
No 139
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=3.1e-36 Score=310.77 Aligned_cols=196 Identities=28% Similarity=0.379 Sum_probs=168.9
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 485 (618)
..++|+..+.||+|+||.||+|... +|+.||+|++...... ..+|++++.++ +||||+++++++.+.+..++
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD------PTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC------CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC------hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 3567899999999999999999876 5899999999754322 34567777766 79999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC----CCcEEeeccc
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE----LNPHLSDCGL 561 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~----~~~kl~Dfgl 561 (618)
||||+++|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||+.++ +.+||+|||+
T Consensus 94 v~E~~~gg~L~~~i~----~~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~ 166 (342)
T 2qr7_A 94 VTELMKGGELLDKIL----RQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGF 166 (342)
T ss_dssp EECCCCSCBHHHHHH----TCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTT
T ss_pred EEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCC
Confidence 999999999999986 345689999999999999999999999 99999999999998543 3499999999
Q ss_pred cccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+........ .....+||+.|+|||++.+..|+.++|||||||++|||++|+.||.
T Consensus 167 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~ 221 (342)
T 2qr7_A 167 AKQLRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFA 221 (342)
T ss_dssp CEECBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cccCcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCC
Confidence 986643322 2234679999999999998889999999999999999999999996
No 140
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.3e-35 Score=314.97 Aligned_cols=201 Identities=24% Similarity=0.381 Sum_probs=164.0
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCccccc------HHHHHHHHHHHHHhhcCCCCcccccceEEee
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS------LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 479 (618)
...++|...+.||+|+||.||+|... +++.||+|++...... ......+.+|++++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 45678999999999999999999775 4899999998754321 122335789999999999999999999975
Q ss_pred CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC---CCcEE
Q 007107 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE---LNPHL 556 (618)
Q Consensus 480 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~---~~~kl 556 (618)
.+..++||||+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.+ +.+||
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTS----SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred cCceEEEEEcCCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEE
Confidence 456899999999999999885 356799999999999999999999999 99999999999999754 45999
Q ss_pred eeccccccCCCCCccccccccccccccCcccccc---CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 557 SDCGLAALTPNTERQVSTQMVGAFGYSAPEFALS---GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 557 ~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+|||+++..... .......||+.|+|||++.+ ..|+.++|||||||++|||++|+.||.
T Consensus 284 ~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~ 345 (419)
T 3i6u_A 284 TDFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 345 (419)
T ss_dssp CCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred eecccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCC
Confidence 999999876432 22345689999999999864 668899999999999999999999996
No 141
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1e-35 Score=308.63 Aligned_cols=202 Identities=25% Similarity=0.380 Sum_probs=172.0
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee--------
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE-------- 479 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------- 479 (618)
.++|...+.||+|+||.||+|... +|+.||+|++............+.+|++++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 467999999999999999999874 68999999987655444445677899999999999999999999977
Q ss_pred CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeec
Q 007107 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (618)
Q Consensus 480 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Df 559 (618)
.+..++||||+++ +|.+.+.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSN---VLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CceEEEEEeccCC-CHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccc
Confidence 3468999999985 77777652 345699999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCC---ccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 560 GLAALTPNTE---RQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 560 gl~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 230 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 230 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCC
Confidence 9997654222 122234578999999999976 458999999999999999999999996
No 142
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.8e-35 Score=301.34 Aligned_cols=206 Identities=24% Similarity=0.396 Sum_probs=169.7
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCccc-ccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAA-LSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
...+|...+.||+|+||.||+|... +|+.||+|++.... ........+.+|++++++++||||+++++++...+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 4467999999999999999999874 68999999987532 244556788999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+++++|.+++.........+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999999975544567789999999999999999999999 9999999999999999999999999999765
Q ss_pred CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... .......|++.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 187 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 237 (310)
T 2wqm_A 187 SSKT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY 237 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred cCCC-ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence 4332 22234578999999999999999999999999999999999999985
No 143
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.8e-35 Score=297.67 Aligned_cols=198 Identities=31% Similarity=0.526 Sum_probs=169.3
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHH-----HHHHHHHHHhhcCCCCcccccceEEeeCC
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEE-----DNFLEAVSNMSRLRHPNIVTLAGYCAEHG 481 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~-----~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 481 (618)
..++|...+.||+|+||.||+|.+. +++.||+|++.......... +.+.+|++++++++||||+++++++.+..
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (287)
T 4f0f_A 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP 96 (287)
T ss_dssp CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT
T ss_pred hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC
Confidence 3467889999999999999999875 68999999986543322221 67899999999999999999999987655
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--ceecCCCCCCeeecCCCC-----c
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS--VVHRNFKSANILLDDELN-----P 554 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--iiH~Dlkp~NiLl~~~~~-----~ 554 (618)
++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+. + |+||||||+||+++.++. +
T Consensus 97 --~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~ 168 (287)
T 4f0f_A 97 --RMVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCA 168 (287)
T ss_dssp --EEEEECCTTCBHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCE
T ss_pred --eEEEEecCCCCHHHHHhc---ccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeE
Confidence 699999999999988852 345799999999999999999999999 7 999999999999988776 9
Q ss_pred EEeeccccccCCCCCccccccccccccccCccccc--cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 555 HLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFAL--SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 555 kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
||+|||+++.... ......||+.|+|||++. ...++.++||||||+++|||++|+.||+
T Consensus 169 kl~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 229 (287)
T 4f0f_A 169 KVADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229 (287)
T ss_dssp EECCCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred EeCCCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCc
Confidence 9999999975432 223457999999999994 4567899999999999999999999996
No 144
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=7.3e-36 Score=311.05 Aligned_cols=196 Identities=26% Similarity=0.411 Sum_probs=157.2
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC------C
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH------G 481 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 481 (618)
.++|...+.||+|+||.||+|... +|+.||||++..........+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 478999999999999999999764 589999999976655566678889999999999999999999998654 5
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccc
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl 561 (618)
..++|+|++ +++|.++++ ...+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 108 ~~~lv~e~~-~~~L~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---
T ss_pred eEEEEeccc-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 679999999 679988885 35699999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 179 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 231 (367)
T 2fst_X 179 ARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred ccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 9765432 234679999999999987 678999999999999999999999996
No 145
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=6.1e-36 Score=301.53 Aligned_cols=206 Identities=26% Similarity=0.388 Sum_probs=164.5
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
...++|+..+.||+|+||.||+|... +|+.||+|++..........+.+.++...++.++||||+++++++.+.+..++
T Consensus 4 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~l 83 (290)
T 3fme_A 4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 83 (290)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEE
T ss_pred ccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEE
Confidence 34578999999999999999999874 68999999998665444445556666666888999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||++ |+|.++++........+++..+..++.|++.||+|||++. +|+||||||+||+++.++.+||+|||++...
T Consensus 84 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 84 CMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred EEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 999997 5888887654445678999999999999999999999853 8999999999999999999999999999766
Q ss_pred CCCCccccccccccccccCcccc----ccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFA----LSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... ......||+.|+|||++ .+..++.++||||||+++|||++|+.||+
T Consensus 161 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 214 (290)
T 3fme_A 161 VDDV--AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 214 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSC
T ss_pred cccc--cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCcc
Confidence 4332 22334799999999996 55678999999999999999999999996
No 146
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=7.3e-36 Score=319.87 Aligned_cols=197 Identities=31% Similarity=0.492 Sum_probs=171.5
Q ss_pred hhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC-eEEE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG-QRLL 485 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~l 485 (618)
...++|...+.||+|+||.||+|.+. |+.||||.++... ..+.|.+|++++++++||||+++++++...+ ..++
T Consensus 190 i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~i 264 (450)
T 1k9a_A 190 LNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 264 (450)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEE
T ss_pred cChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEE
Confidence 34567888999999999999999886 7899999997643 3467899999999999999999999987765 7999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+++|+|.++++.. ....+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++..
T Consensus 265 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 339 (450)
T 1k9a_A 265 VTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 339 (450)
T ss_dssp EEECCTTCBHHHHHHHH--CTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccc
Confidence 99999999999999743 223478999999999999999999999 9999999999999999999999999999754
Q ss_pred CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.... ....+++.|+|||++.+..++.++|||||||++|||+| |+.||.
T Consensus 340 ~~~~----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~ 388 (450)
T 1k9a_A 340 SSTQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP 388 (450)
T ss_dssp C----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred cccc----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 3221 22357889999999999999999999999999999998 999996
No 147
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=9.3e-36 Score=305.78 Aligned_cols=211 Identities=19% Similarity=0.304 Sum_probs=178.9
Q ss_pred eehhhhhhhhcCCccc-ceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceE
Q 007107 400 YTVASLQTATNSFSQE-FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGY 476 (618)
Q Consensus 400 ~~~~~~~~~~~~~~~~-~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~ 476 (618)
..+...+...++|... +.||+|+||.||+|... +|+.||+|+++...........+.+|+.+++++ .||||++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~ 97 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV 97 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence 3444556667778777 88999999999999876 589999999986655444567788999999988 46999999999
Q ss_pred EeeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC---CCC
Q 007107 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---ELN 553 (618)
Q Consensus 477 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~---~~~ 553 (618)
+...+..++||||+++|+|.+++.. .....+++..++.++.|++.||+|||+. +|+||||||+|||++. ++.
T Consensus 98 ~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~ 172 (327)
T 3lm5_A 98 YENTSEIILILEYAAGGEIFSLCLP--ELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGD 172 (327)
T ss_dssp EECSSEEEEEEECCTTEEGGGGGSS--CC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCC
T ss_pred EEeCCeEEEEEEecCCCcHHHHHHH--hcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCc
Confidence 9999999999999999999998852 2346789999999999999999999999 9999999999999997 789
Q ss_pred cEEeeccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 554 PHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 554 ~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+||+|||+++....... .....||+.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 173 ~kL~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~ 234 (327)
T 3lm5_A 173 IKIVDFGMSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFV 234 (327)
T ss_dssp EEECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEEeeCccccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 99999999987643322 234579999999999999999999999999999999999999995
No 148
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1e-35 Score=301.09 Aligned_cols=199 Identities=19% Similarity=0.275 Sum_probs=173.0
Q ss_pred hhcCCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 485 (618)
..++|...+.||+|+||.||+|.. .+|+.||+|++.... ..+.+.+|++.++++ +|+|++++++++......++
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 83 (298)
T 1csn_A 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL 83 (298)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEE
Confidence 456799999999999999999986 468999999986433 234577888899888 79999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCC-----cEEeecc
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN-----PHLSDCG 560 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~-----~kl~Dfg 560 (618)
||||+ +++|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 84 v~e~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg 156 (298)
T 1csn_A 84 VIDLL-GPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFG 156 (298)
T ss_dssp EEECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred EEEec-CCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECc
Confidence 99999 89999999742 34699999999999999999999999 9999999999999987776 9999999
Q ss_pred ccccCCCCCcc------ccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQ------VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 219 (298)
T 1csn_A 157 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQ 219 (298)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTS
T ss_pred cccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcc
Confidence 99866433221 2234579999999999999999999999999999999999999996
No 149
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=7.7e-36 Score=323.23 Aligned_cols=200 Identities=27% Similarity=0.435 Sum_probs=174.2
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
..++|...+.||+|+||.||+|... +++.||+|++............+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 4567999999999999999999876 689999999875443334467789999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeec---CCCCcEEeeccccc
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD---DELNPHLSDCGLAA 563 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~---~~~~~kl~Dfgl~~ 563 (618)
|||+.+|+|.+.+.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++ .++.+||+|||+++
T Consensus 100 ~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 100 GELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp ECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 999999999998863 35689999999999999999999999 999999999999995 55679999999997
Q ss_pred cCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
...... ......||+.|+|||++.+ .|+.++||||+||++|+|++|+.||.
T Consensus 173 ~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~ 223 (486)
T 3mwu_A 173 CFQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFY 223 (486)
T ss_dssp TBCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred ECCCCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 664332 2234579999999999876 59999999999999999999999995
No 150
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=8e-36 Score=323.67 Aligned_cols=201 Identities=27% Similarity=0.416 Sum_probs=170.6
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
...++|...+.||+|+||.||+|... +++.||+|++............+.+|+++++.++||||+++++++.+.+..++
T Consensus 34 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 113 (494)
T 3lij_A 34 HLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYL 113 (494)
T ss_dssp CHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred chhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 34567999999999999999999876 58899999997655444446778999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC---CCCcEEeecccc
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---ELNPHLSDCGLA 562 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~---~~~~kl~Dfgl~ 562 (618)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++. ++.+||+|||++
T Consensus 114 v~e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a 186 (494)
T 3lij_A 114 VMECYKGGELFDEIIH----RMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLS 186 (494)
T ss_dssp EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCC
Confidence 9999999999998863 35689999999999999999999999 9999999999999975 455999999999
Q ss_pred ccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 563 ALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
....... ......||+.|+|||++. ..|+.++||||+||++|+|++|+.||.
T Consensus 187 ~~~~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~ 238 (494)
T 3lij_A 187 AVFENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFG 238 (494)
T ss_dssp EECBTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred eECCCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCC
Confidence 8765332 233467999999999886 569999999999999999999999996
No 151
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3.4e-36 Score=308.79 Aligned_cols=201 Identities=27% Similarity=0.442 Sum_probs=168.0
Q ss_pred hcCCcccceeccCccceEEEEEEcC-CcE----EEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFAN-GKI----MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~----vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
.++|...+.||+|+||.||+|.+.. ++. ||+|.+.... .......+.+|+.++++++||||+++++++. .+..
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 89 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSL 89 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT-SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc-cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCcc
Confidence 4578889999999999999998653 443 7888775432 1222345778899999999999999999886 5678
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++||||+.+|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 90 ~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 90 QLVTQYLPLGSLLDHVRQ---HRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp EEEEECCTTCBSHHHHHS---SGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred EEEEEeCCCCCHHHHHHH---ccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccc
Confidence 999999999999999863 235688999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCcc-ccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 564 LTPNTERQ-VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
........ ......||+.|+|||++.+..++.++||||||+++|||+| |+.||.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 219 (325)
T 3kex_A 164 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYA 219 (325)
T ss_dssp GSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred ccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCcc
Confidence 76544322 2344578889999999999999999999999999999999 999996
No 152
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.6e-35 Score=309.39 Aligned_cols=197 Identities=23% Similarity=0.309 Sum_probs=165.3
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC------
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG------ 481 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 481 (618)
.++|...+.||+|+||.||+|... +++.||+|++..........+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 468999999999999999999765 5899999999765555566778899999999999999999999997665
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccc
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl 561 (618)
..++||||+++ +|.++++ ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp EEEEEEECCSE-EHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred ceEEEEEcCCC-CHHHHHh------hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 78999999975 7888775 3488999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 174 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 227 (371)
T 2xrw_A 174 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP 227 (371)
T ss_dssp ------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred ccccccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 9765432 12234679999999999999999999999999999999999999996
No 153
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.1e-36 Score=308.02 Aligned_cols=199 Identities=25% Similarity=0.385 Sum_probs=164.3
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
++|...+.||+|+||.||+|... +++.||+|++..... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc-cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 46888999999999999999876 689999999865431 1122245679999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|++ |+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 81 YLD-KDLKQYLDD---CGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp CCS-EEHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred ccc-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 997 588888863 245689999999999999999999999 9999999999999999999999999999765432
Q ss_pred CccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 154 ~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 202 (324)
T 3mtl_A 154 T-KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFP 202 (324)
T ss_dssp ----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred c-cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 2 22234578999999999876 568999999999999999999999996
No 154
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.4e-36 Score=318.12 Aligned_cols=202 Identities=17% Similarity=0.252 Sum_probs=166.1
Q ss_pred hhhcCCcccceeccCccceEEEEEE-cCCcEEEEEEcCccc-ccHHHHHHHHHHH---HHhhcCCCCcccccc-------
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAA-LSLQEEDNFLEAV---SNMSRLRHPNIVTLA------- 474 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~~~e~---~~l~~l~h~niv~l~------- 474 (618)
...++|...+.||+|+||.||+|.+ .+|+.||||++.... ......+.+.+|+ +.+++++||||++++
T Consensus 70 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~ 149 (377)
T 3byv_A 70 ERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF 149 (377)
T ss_dssp CCCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCS
T ss_pred CCCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhh
Confidence 3457899999999999999999986 469999999987442 2334567888999 556666899999998
Q ss_pred eEEeeCCe-----------------EEEEEEecCCCChhhhhhcccCC---CCCCCHHHHHHHHHHHHHHHHHHhhcCCC
Q 007107 475 GYCAEHGQ-----------------RLLVYEYVGNGNLHDMLHFADDS---SKNLTWNARVRVALGTARALEYLHEVCLP 534 (618)
Q Consensus 475 ~~~~~~~~-----------------~~lv~e~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~ 534 (618)
+++.+.+. .++||||+ +|+|.++++..... ...+++..+..++.||+.||+|||+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--- 225 (377)
T 3byv_A 150 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY--- 225 (377)
T ss_dssp EEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred hhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---
Confidence 66665532 78999999 57999999743211 12344588889999999999999999
Q ss_pred CceecCCCCCCeeecCCCCcEEeeccccccCCCCCccccccccccccccCccccccC-----------CccccchhhhHH
Q 007107 535 SVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSG-----------IYTVKSDVYSFG 603 (618)
Q Consensus 535 ~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwSlG 603 (618)
+|+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++||||||
T Consensus 226 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG 300 (377)
T 3byv_A 226 GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALG 300 (377)
T ss_dssp TEECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHH
T ss_pred CeecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHH
Confidence 999999999999999999999999999986432 2234567 999999999887 899999999999
Q ss_pred HHHHHHHhCCCCCC
Q 007107 604 VVMLELLTGRKPLD 617 (618)
Q Consensus 604 ~il~elltg~~Pf~ 617 (618)
|++|||++|+.||.
T Consensus 301 ~il~elltg~~Pf~ 314 (377)
T 3byv_A 301 LVIYWIWCADLPIT 314 (377)
T ss_dssp HHHHHHHHSSCCC-
T ss_pred HHHHHHHHCCCCCc
Confidence 99999999999995
No 155
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.7e-36 Score=329.90 Aligned_cols=204 Identities=32% Similarity=0.525 Sum_probs=177.4
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
.+...++|...+.||+|+||.||+|.+.++..||||+++..... .+.|.+|++++++++||||+++++++.+ +..+
T Consensus 262 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~ 337 (535)
T 2h8h_A 262 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY 337 (535)
T ss_dssp SBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred eecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEee-ccce
Confidence 34456778899999999999999999988889999999865433 4578999999999999999999999876 6789
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||+++|+|.++++.. ....+++..++.++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++.
T Consensus 338 lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 412 (535)
T 2h8h_A 338 IVTEYMSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARL 412 (535)
T ss_dssp EEECCCTTEEHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTT
T ss_pred EeeehhcCCcHHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEccccccee
Confidence 999999999999999632 224589999999999999999999999 999999999999999999999999999987
Q ss_pred CCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.............++..|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 413 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~ 466 (535)
T 2h8h_A 413 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP 466 (535)
T ss_dssp CCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSST
T ss_pred cCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 65432222234467889999999999999999999999999999999 999996
No 156
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.5e-35 Score=297.82 Aligned_cols=199 Identities=28% Similarity=0.429 Sum_probs=175.1
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCccccc-HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
.++|...+.||+|+||.||+|... +++.||+|++...... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 467889999999999999999876 4788999998653321 11246788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 93 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 93 LEFAPRGELYKELQK----HGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp ECCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 999999999999863 34689999999999999999999999 99999999999999999999999999987654
Q ss_pred CCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... .....|++.|+|||++.+..++.++||||||+++|||++|+.||+
T Consensus 166 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 213 (284)
T 2vgo_A 166 SLR---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213 (284)
T ss_dssp SSC---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTC
T ss_pred ccc---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCC
Confidence 322 234578999999999999999999999999999999999999996
No 157
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-35 Score=297.57 Aligned_cols=201 Identities=25% Similarity=0.410 Sum_probs=173.3
Q ss_pred hcCCcccc-eeccCccceEEEEEEc---CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 409 TNSFSQEF-LIGEGSLGRVYRAEFA---NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 409 ~~~~~~~~-~Lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
.++|...+ .||+|+||.||+|.+. +++.||+|+++... .....+.+.+|++++++++||||+++++++ ..+..+
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~ 85 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALM 85 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc-chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcE
Confidence 45566665 8999999999999764 57889999997653 445667899999999999999999999999 556799
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||+++++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 86 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 86 LVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKA 159 (287)
T ss_dssp EEEECCTTEEHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEeCCCCCHHHHHHh---CCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceee
Confidence 99999999999999862 345689999999999999999999999 999999999999999999999999999987
Q ss_pred CCCCCccc--cccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 565 TPNTERQV--STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
........ .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 215 (287)
T 1u59_A 160 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK 215 (287)
T ss_dssp CTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred eccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcc
Confidence 65433221 223457889999999998899999999999999999999 999996
No 158
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=302.45 Aligned_cols=207 Identities=26% Similarity=0.370 Sum_probs=174.5
Q ss_pred hhhhcCCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee----C
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE----H 480 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~ 480 (618)
....++|...+.||+|+||.||+|.. .+|+.||+|++... .....+.+.+|++++++++||||+++++++.. .
T Consensus 25 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 102 (317)
T 2buj_A 25 IIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAK 102 (317)
T ss_dssp EETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTE
T ss_pred EECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC--CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCC
Confidence 34567899999999999999999987 46899999988643 34456788999999999999999999999873 3
Q ss_pred CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecc
Q 007107 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (618)
Q Consensus 481 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfg 560 (618)
...++||||+++|+|.+++.........+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 103 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg 179 (317)
T 2buj_A 103 HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLG 179 (317)
T ss_dssp EEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCS
T ss_pred ceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecC
Confidence 478999999999999999976555567899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCcc--------ccccccccccccCccccccCC---ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQ--------VSTQMVGAFGYSAPEFALSGI---YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++......... ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 247 (317)
T 2buj_A 180 SMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247 (317)
T ss_dssp SCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTH
T ss_pred cchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChh
Confidence 98755321111 012346799999999987654 6889999999999999999999984
No 159
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1e-35 Score=307.27 Aligned_cols=206 Identities=27% Similarity=0.406 Sum_probs=173.0
Q ss_pred hhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHH-hhcCCCCcccccceEEeeCCeE
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSN-MSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~ 483 (618)
+...++|+..+.||+|+||.||+|... +|+.||||++........ ..++..|... ++.++||||+++++++...+..
T Consensus 47 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~ 125 (340)
T 3an0_A 47 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE-QKRLLMDLDISMRTVDCPFTVTFYGALFREGDV 125 (340)
T ss_dssp CCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHH-HHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCE
T ss_pred EEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHH-HHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcE
Confidence 455678999999999999999999874 689999999976554433 3444445444 7888999999999999999999
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++||||+++ +|.++++........+++..+..++.||+.||+|||+.. +|+||||||+|||++.++.+||+|||+++
T Consensus 126 ~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 202 (340)
T 3an0_A 126 WICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISG 202 (340)
T ss_dssp EEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHH
T ss_pred EEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCce
Confidence 999999975 999988654445678999999999999999999999742 89999999999999999999999999997
Q ss_pred cCCCCCccccccccccccccCcccccc----CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTERQVSTQMVGAFGYSAPEFALS----GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..... .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||+
T Consensus 203 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~ 258 (340)
T 3an0_A 203 YLVDS--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 258 (340)
T ss_dssp HHSCH--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSC
T ss_pred ecccc--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCc
Confidence 65432 12233479999999999743 468999999999999999999999996
No 160
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.6e-35 Score=297.42 Aligned_cols=200 Identities=26% Similarity=0.387 Sum_probs=173.1
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccH----HHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL----QEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
.++|...+.||+|+||.||+|... +|+.||+|.++...... ...+.+.+|++++++++||||+++++++...+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 356888999999999999999886 58999999987543221 1356789999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCC----CcEEeec
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL----NPHLSDC 559 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~----~~kl~Df 559 (618)
++||||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++ .+||+||
T Consensus 84 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~df 156 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDF 156 (283)
T ss_dssp EEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEeecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEec
Confidence 999999999999999963 35689999999999999999999999 999999999999999877 8999999
Q ss_pred cccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 560 GLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 560 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|++........ .....||+.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 157 g~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 212 (283)
T 3bhy_A 157 GIAHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 212 (283)
T ss_dssp TTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred ccceeccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCC
Confidence 99976643222 234568999999999999999999999999999999999999996
No 161
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.1e-35 Score=309.47 Aligned_cols=200 Identities=24% Similarity=0.421 Sum_probs=175.4
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
..++|...+.||+|+||.||+|.+. +++.||+|++.... .....+.+.+|++++++++||||+++++++...+..++|
T Consensus 31 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 109 (360)
T 3eqc_A 31 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109 (360)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc-CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence 3567899999999999999999876 58999999987543 445567899999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+++++|.++++. ...+++..+..++.|++.||+|||+.+ +|+||||||+|||++.++.+||+|||++....
T Consensus 110 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 183 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183 (360)
T ss_dssp ECCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred EECCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence 999999999999973 346899999999999999999999842 79999999999999999999999999986442
Q ss_pred CCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 184 ~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 231 (360)
T 3eqc_A 184 D---SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 231 (360)
T ss_dssp H---HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSS
T ss_pred c---ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 1 12234579999999999999999999999999999999999999995
No 162
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.4e-35 Score=311.34 Aligned_cols=200 Identities=28% Similarity=0.367 Sum_probs=167.5
Q ss_pred hhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC----
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH---- 480 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---- 480 (618)
+...++|...+.||+|+||.||+|... +|+.||+|++..... ...+|+++++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 445678999999999999999999764 689999999864432 234689999999999999999998543
Q ss_pred ----------------------------------CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 007107 481 ----------------------------------GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALE 526 (618)
Q Consensus 481 ----------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~ 526 (618)
...++||||++ |+|.+.++........+++..+..++.||++||+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ---------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 34789999998 5888877654445678999999999999999999
Q ss_pred HHhhcCCCCceecCCCCCCeeec-CCCCcEEeeccccccCCCCCccccccccccccccCccccccC-CccccchhhhHHH
Q 007107 527 YLHEVCLPSVVHRNFKSANILLD-DELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGV 604 (618)
Q Consensus 527 ~LH~~~~~~iiH~Dlkp~NiLl~-~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~ 604 (618)
|||+. +|+||||||+|||++ +++.+||+|||+++....... .....||+.|+|||++.+. .++.++||||+||
T Consensus 156 ~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 230 (383)
T 3eb0_A 156 FIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGC 230 (383)
T ss_dssp HHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHH
T ss_pred HHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHH
Confidence 99999 999999999999998 688999999999986644332 2345789999999998875 4899999999999
Q ss_pred HHHHHHhCCCCCC
Q 007107 605 VMLELLTGRKPLD 617 (618)
Q Consensus 605 il~elltg~~Pf~ 617 (618)
++|||++|+.||.
T Consensus 231 il~ell~g~~pf~ 243 (383)
T 3eb0_A 231 VFGELILGKPLFS 243 (383)
T ss_dssp HHHHHHHSSCSSC
T ss_pred HHHHHHhCCCCCC
Confidence 9999999999996
No 163
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.1e-35 Score=298.30 Aligned_cols=203 Identities=27% Similarity=0.419 Sum_probs=171.4
Q ss_pred hhhcCCcccceeccCccceEEEEEEcC----CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCe
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (618)
...++|...+.||+|+||.||+|.+.+ +..||+|.+.... .....+.+.+|++++++++||||+++++++.+ +.
T Consensus 9 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~ 86 (281)
T 3cc6_A 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EP 86 (281)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SS
T ss_pred ecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CC
Confidence 345688899999999999999997653 3469999987653 34456789999999999999999999999865 45
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccc
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~ 562 (618)
.++||||+++++|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 87 ~~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 160 (281)
T 3cc6_A 87 TWIIMELYPYGELGHYLER---NKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLS 160 (281)
T ss_dssp CEEEEECCTTCBHHHHHHH---HTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGG
T ss_pred CEEEEecCCCCCHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCC
Confidence 6899999999999999963 235689999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 563 ALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
...............+|+.|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~ 216 (281)
T 3cc6_A 161 RYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF 216 (281)
T ss_dssp GCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred cccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcc
Confidence 8765443333344567889999999999999999999999999999998 999985
No 164
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.2e-35 Score=301.76 Aligned_cols=197 Identities=28% Similarity=0.425 Sum_probs=172.2
Q ss_pred CcccceeccCccceEEEEEEc-----CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC--CeEE
Q 007107 412 FSQEFLIGEGSLGRVYRAEFA-----NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--GQRL 484 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 484 (618)
|...+.||+|+||.||++.+. +++.||+|+++... .....+.+.+|++++++++||||+++++++.+. ...+
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA-GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc-ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 488899999999999998653 58899999997653 445677899999999999999999999999884 5789
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||+++|+|.+++.. ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 112 lv~e~~~~~~L~~~l~~-----~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPR-----HSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 183 (318)
T ss_dssp EEECCCTTCBHHHHGGG-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEecccCCcHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccc
Confidence 99999999999999962 3489999999999999999999999 999999999999999999999999999987
Q ss_pred CCCCCcc--ccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 565 TPNTERQ--VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 565 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
....... ......||+.|+|||++.+..++.++||||||+++|||+||+.||.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~ 238 (318)
T 3lxp_A 184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 238 (318)
T ss_dssp CCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred ccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCccc
Confidence 6543321 2234568889999999999999999999999999999999999985
No 165
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=8.8e-36 Score=302.26 Aligned_cols=202 Identities=24% Similarity=0.420 Sum_probs=172.4
Q ss_pred hcCCcccceeccCccceEEEEEE-----cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC--C
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEF-----ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH--G 481 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~ 481 (618)
.+.|+..+.||+|+||.||+|.+ .+++.||+|++.... .....+.+.+|++++++++||||+++++++... .
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 98 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 98 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---C
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCc
Confidence 45688899999999999999984 358999999997543 223346789999999999999999999999876 6
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccc
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl 561 (618)
..++||||+++++|.++++. ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 99 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 99 GIKLIMEFLPSGSLKEYLPK---NKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp CEEEEEECCTTCBHHHHHHH---HTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred eEEEEEEeCCCCcHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccc
Confidence 68999999999999999953 235689999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCc--cccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNTER--QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+........ .......||..|+|||++.+..++.++||||||+++|||+||+.|+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 230 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDS 230 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred cccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCc
Confidence 987654432 22334578889999999999999999999999999999999998863
No 166
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.1e-35 Score=299.05 Aligned_cols=201 Identities=27% Similarity=0.425 Sum_probs=170.5
Q ss_pred cCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
++|+..+.||+|+||.||+|... +|+.||+|++............+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57888999999999999999876 68999999997654333334678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNT 568 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~ 568 (618)
|++ ++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~-~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 83 FLH-QDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp CCS-EEHHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred ccc-CCHHHHHHhh--hccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 997 6999988643 235688999999999999999999999 9999999999999999999999999999765432
Q ss_pred CccccccccccccccCccccccCC-ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 569 ERQVSTQMVGAFGYSAPEFALSGI-YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 569 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||.
T Consensus 157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 205 (299)
T 2r3i_A 157 VR-TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFP 205 (299)
T ss_dssp SB-CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred cc-ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCC
Confidence 22 223357899999999998765 7999999999999999999999996
No 167
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.3e-36 Score=315.25 Aligned_cols=203 Identities=25% Similarity=0.382 Sum_probs=174.0
Q ss_pred hhcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC--eEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG--QRL 484 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~ 484 (618)
..++|...+.||+|+||.||+|.+.. |+.||+|++..... ....+.+.+|++++++++||||+++++++...+ ..+
T Consensus 7 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 85 (396)
T 4eut_A 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (396)
T ss_dssp SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeE
Confidence 34678999999999999999998764 89999999975432 223566789999999999999999999998765 779
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeee----cCCCCcEEeecc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL----DDELNPHLSDCG 560 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl----~~~~~~kl~Dfg 560 (618)
+||||+++|+|.++++... ....+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||
T Consensus 86 lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG 161 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (396)
T ss_dssp EEECCCTTEEHHHHTTSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred EEEecCCCCCHHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence 9999999999999997432 233489999999999999999999999 99999999999999 777789999999
Q ss_pred ccccCCCCCccccccccccccccCcccccc--------CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFALS--------GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 162 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~ 224 (396)
T 4eut_A 162 AARELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224 (396)
T ss_dssp GCEECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEE
T ss_pred CceEccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 998765432 2234579999999999875 567889999999999999999999985
No 168
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=301.05 Aligned_cols=197 Identities=31% Similarity=0.519 Sum_probs=163.3
Q ss_pred hcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 488 (618)
.++|+..+.||+|+||.||+|.+. ++.||+|++... ...+.+.+|++.+++++||||+++++++. +..++|||
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e 79 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVME 79 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEE
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEE
Confidence 357888899999999999999885 788999999643 34577899999999999999999999876 34799999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCC-cEEeeccccccCCC
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN-PHLSDCGLAALTPN 567 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~-~kl~Dfgl~~~~~~ 567 (618)
|+++|+|.++++... ....+++..+..++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++.....
T Consensus 80 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 80 YAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp CCTTCBHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred cCCCCCHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 999999999997422 1234788999999999999999999932228999999999999998886 79999999975532
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
. .....||+.|+|||++.+..++.++||||||+++|||++|+.||+
T Consensus 159 ~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 204 (307)
T 2eva_A 159 H----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 204 (307)
T ss_dssp ----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTT
T ss_pred c----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCch
Confidence 2 123468999999999999999999999999999999999999996
No 169
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.4e-35 Score=302.66 Aligned_cols=212 Identities=25% Similarity=0.436 Sum_probs=179.4
Q ss_pred hhhhhhhhcCCcccceeccCccceEEEEEE------cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccc
Q 007107 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEF------ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLA 474 (618)
Q Consensus 402 ~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~ 474 (618)
........++|...+.||+|+||.||+|.+ .+++.||+|+++... .....+.+.+|++++.++ +||||++++
T Consensus 19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC-CcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 334455678899999999999999999974 246889999997653 344567789999999999 799999999
Q ss_pred eEEeeCC-eEEEEEEecCCCChhhhhhcccCC------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCC
Q 007107 475 GYCAEHG-QRLLVYEYVGNGNLHDMLHFADDS------------SKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNF 541 (618)
Q Consensus 475 ~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dl 541 (618)
+++...+ ..++||||+++|+|.+++...... ...+++..+..++.|++.||+|||+. +|+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccC
Confidence 9988765 589999999999999999743221 12388999999999999999999999 9999999
Q ss_pred CCCCeeecCCCCcEEeeccccccCCCCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 542 KSANILLDDELNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 542 kp~NiLl~~~~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
||+||+++.++.+||+|||+++....... .......||+.|+|||++.+..++.++||||||+++|||+| |+.||.
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 252 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence 99999999999999999999986643322 22334578899999999999999999999999999999998 999995
No 170
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=9.3e-36 Score=322.58 Aligned_cols=201 Identities=28% Similarity=0.466 Sum_probs=176.5
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCccccc-HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
...++|...+.||+|+||.||+|... +|+.||+|++...... ......+.+|++++++++||||+++++++.+.+..+
T Consensus 23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 102 (484)
T 3nyv_A 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY 102 (484)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 34567999999999999999999876 6899999998654322 234577899999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeee---cCCCCcEEeeccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL---DDELNPHLSDCGL 561 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl---~~~~~~kl~Dfgl 561 (618)
+||||+.+|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+
T Consensus 103 lv~e~~~~~~L~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~ 175 (484)
T 3nyv_A 103 LVGEVYTGGELFDEII----SRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGL 175 (484)
T ss_dssp EEECCCCSCBHHHHHH----TCSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTH
T ss_pred EEEecCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeee
Confidence 9999999999999886 346799999999999999999999999 99999999999999 5678999999999
Q ss_pred cccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++...... ......||+.|+|||++.+ .|+.++||||+||++|+|++|+.||.
T Consensus 176 a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~ 228 (484)
T 3nyv_A 176 STHFEASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFN 228 (484)
T ss_dssp HHHBCCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred eEEccccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCC
Confidence 98765432 2234579999999999876 69999999999999999999999996
No 171
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=4.5e-35 Score=297.32 Aligned_cols=200 Identities=27% Similarity=0.449 Sum_probs=177.0
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
..+.|...+.||+|+||.||+|... +++.||+|++...... ...+.+.+|+.++++++||||+++++++...+..++|
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 98 (303)
T 3a7i_A 20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII 98 (303)
T ss_dssp GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS-TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH-HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence 3456889999999999999999765 5899999998754322 3457789999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+++++|.++++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 99 ~e~~~~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 170 (303)
T 3a7i_A 99 MEYLGGGSALDLLE-----PGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 170 (303)
T ss_dssp EECCTTEEHHHHHT-----TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECB
T ss_pred EEeCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecC
Confidence 99999999999985 35789999999999999999999999 99999999999999999999999999997664
Q ss_pred CCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
... .......||+.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 171 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 220 (303)
T 3a7i_A 171 DTQ-IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHS 220 (303)
T ss_dssp TTB-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred ccc-cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCC
Confidence 332 12234578999999999999999999999999999999999999986
No 172
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.3e-35 Score=299.46 Aligned_cols=202 Identities=29% Similarity=0.420 Sum_probs=171.2
Q ss_pred hhcCCcccc-eeccCccceEEEEEEc---CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 408 ATNSFSQEF-LIGEGSLGRVYRAEFA---NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 408 ~~~~~~~~~-~Lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
..++|...+ .||+|+||.||+|.+. .++.||+|+++.........+.+.+|++++++++||||+++++++ ..+..
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence 346777777 9999999999999653 368899999986654455567899999999999999999999999 56788
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++||||+++++|.++++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 93 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp EEEEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEEeCCCCCHHHHHHh----CcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 999999999999999973 45689999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCccc--cccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 564 LTPNTERQV--STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
......... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~ 222 (291)
T 1xbb_A 166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 222 (291)
T ss_dssp ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCC
Confidence 765443322 122356789999999999899999999999999999999 999996
No 173
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.7e-35 Score=302.25 Aligned_cols=200 Identities=24% Similarity=0.370 Sum_probs=166.1
Q ss_pred hcCCccc-ceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEE
Q 007107 409 TNSFSQE-FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 409 ~~~~~~~-~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 485 (618)
.+.|... +.||+|+||.||+|... +++.||+|++..... .....+.+|++++.++ +||||+++++++.+.+..++
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~l 88 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG--HIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYL 88 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS--CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc--hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 4567774 68999999999999865 689999999865432 2356788999999884 79999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCC---cEEeecccc
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN---PHLSDCGLA 562 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~---~kl~Dfgl~ 562 (618)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||++
T Consensus 89 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~ 161 (316)
T 2ac3_A 89 VFEKMRGGSILSHIHK----RRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLG 161 (316)
T ss_dssp EEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCC
T ss_pred EEEcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCc
Confidence 9999999999999973 35689999999999999999999999 9999999999999998766 999999998
Q ss_pred ccCCCCCc------cccccccccccccCcccccc-----CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 563 ALTPNTER------QVSTQMVGAFGYSAPEFALS-----GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
........ .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 227 (316)
T 2ac3_A 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV 227 (316)
T ss_dssp C-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred cccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCc
Confidence 75532211 11123469999999999975 568899999999999999999999995
No 174
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3.3e-35 Score=319.69 Aligned_cols=202 Identities=26% Similarity=0.380 Sum_probs=172.6
Q ss_pred hhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccH-----------HHHHHHHHHHHHhhcCCCCccccc
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL-----------QEEDNFLEAVSNMSRLRHPNIVTL 473 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-----------~~~~~~~~e~~~l~~l~h~niv~l 473 (618)
....++|...+.||+|+||.||+|... +++.||+|++....... ...+.+.+|++++++++||||+++
T Consensus 32 ~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~ 111 (504)
T 3q5i_A 32 GKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKL 111 (504)
T ss_dssp SCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCE
T ss_pred CCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence 345678999999999999999999876 47899999987543221 234678899999999999999999
Q ss_pred ceEEeeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCC-
Q 007107 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL- 552 (618)
Q Consensus 474 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~- 552 (618)
++++.+.+..++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++
T Consensus 112 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~ 184 (504)
T 3q5i_A 112 FDVFEDKKYFYLVTEFYEGGELFEQIIN----RHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNS 184 (504)
T ss_dssp EEEEECSSEEEEEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTC
T ss_pred EEEEEcCCEEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCC
Confidence 9999999999999999999999998863 35689999999999999999999999 999999999999998775
Q ss_pred --CcEEeeccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 553 --NPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 553 --~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.+||+|||++....... ......||+.|+|||++. ..|+.++||||+||++|+|++|+.||.
T Consensus 185 ~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~ 248 (504)
T 3q5i_A 185 LLNIKIVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFG 248 (504)
T ss_dssp CSSEEECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CccEEEEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCC
Confidence 69999999998765432 223457999999999987 469999999999999999999999996
No 175
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-35 Score=303.17 Aligned_cols=203 Identities=27% Similarity=0.452 Sum_probs=169.4
Q ss_pred hhcCCcccceeccCccceEEEEEEcC-----CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCe
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (618)
...+|...+.||+|+||.||+|.+.. +..||+|.++... .......+.+|++++++++||||+++++++...+.
T Consensus 42 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 120 (333)
T 1mqb_A 42 HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 120 (333)
T ss_dssp CTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred ChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC
Confidence 44678888999999999999997653 2459999997543 34456679999999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccc
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~ 562 (618)
.++||||+++|+|.++++. ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 121 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 194 (333)
T 1mqb_A 121 MMIITEYMENGALDKFLRE---KDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLS 194 (333)
T ss_dssp EEEEEECCTTEEHHHHHHH---TTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred cEEEEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcc
Confidence 9999999999999999963 345789999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCcc--ccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 563 ALTPNTERQ--VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
+........ ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~ 252 (333)
T 1mqb_A 195 RVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYW 252 (333)
T ss_dssp ----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred hhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcc
Confidence 766433221 1223356789999999999999999999999999999999 999995
No 176
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-35 Score=308.98 Aligned_cols=201 Identities=29% Similarity=0.477 Sum_probs=161.4
Q ss_pred cCCcccceeccCccceEEEEEEcC--C--cEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee-CCeEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFAN--G--KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE-HGQRL 484 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~--g--~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~ 484 (618)
..|...+.||+|+||.||+|.+.+ + ..||+|.++... .....+.+.+|+.++++++||||+++++++.. ++..+
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~ 167 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 167 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS-CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeE
Confidence 346777899999999999997642 2 468999987533 34456789999999999999999999998754 56789
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||+++|+|.++++. ....+++..+..++.||++||+|||+. +|+||||||+|||+++++.+||+|||+++.
T Consensus 168 lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 241 (373)
T 3c1x_A 168 VVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARD 241 (373)
T ss_dssp EEEECCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEECCCCCCHHHHHhh---cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccc
Confidence 99999999999999963 345688999999999999999999999 999999999999999999999999999976
Q ss_pred CCCCCcc---ccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 565 TPNTERQ---VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 565 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
....... ......+|+.|+|||++.+..++.++|||||||++|||+| |.+||.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~ 298 (373)
T 3c1x_A 242 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 298 (373)
T ss_dssp ----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCT
T ss_pred ccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCC
Confidence 5432211 1233467889999999999999999999999999999999 777875
No 177
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=3.5e-35 Score=305.98 Aligned_cols=203 Identities=27% Similarity=0.420 Sum_probs=175.8
Q ss_pred hhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc--c----HHHHHHHHHHHHHhhcC-CCCcccccceEE
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL--S----LQEEDNFLEAVSNMSRL-RHPNIVTLAGYC 477 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 477 (618)
....++|...+.||+|+||.||+|.+. +|+.||||++..... . ....+.+.+|+.+++++ +||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 444577999999999999999999886 699999999864431 1 12245678999999998 799999999999
Q ss_pred eeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEe
Q 007107 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLS 557 (618)
Q Consensus 478 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~ 557 (618)
...+..++||||+++++|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~ 242 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLS 242 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred eeCCEEEEEEEeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEE
Confidence 999999999999999999999863 35689999999999999999999999 99999999999999999999999
Q ss_pred eccccccCCCCCccccccccccccccCcccccc------CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 558 DCGLAALTPNTERQVSTQMVGAFGYSAPEFALS------GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 558 Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|||++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 243 DfG~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~ 306 (365)
T 2y7j_A 243 DFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFW 306 (365)
T ss_dssp CCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred ecCcccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCC
Confidence 9999987654322 234679999999999863 358899999999999999999999995
No 178
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.7e-35 Score=299.16 Aligned_cols=198 Identities=27% Similarity=0.437 Sum_probs=172.8
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
..++|...+.||+|+||.||+|... +|+.||+|.+.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP--AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc--ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 3467889999999999999999876 68999999997543 22345688999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeee---cCCCCcEEeeccccc
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL---DDELNPHLSDCGLAA 563 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl---~~~~~~kl~Dfgl~~ 563 (618)
|||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||++.
T Consensus 85 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~ 157 (304)
T 2jam_A 85 MQLVSGGELFDRILE----RGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157 (304)
T ss_dssp ECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred EEcCCCccHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence 999999999998863 34689999999999999999999999 99999999999999 788999999999997
Q ss_pred cCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 158 ~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 208 (304)
T 2jam_A 158 MEQNG---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFY 208 (304)
T ss_dssp CCCCB---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred ecCCC---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 65432 2234579999999999999999999999999999999999999995
No 179
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=4.4e-35 Score=305.18 Aligned_cols=207 Identities=25% Similarity=0.322 Sum_probs=170.5
Q ss_pred hhhhhhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccc---------cHHHHHHHHHHHHHhhcCCCCcccc
Q 007107 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAAL---------SLQEEDNFLEAVSNMSRLRHPNIVT 472 (618)
Q Consensus 402 ~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~---------~~~~~~~~~~e~~~l~~l~h~niv~ 472 (618)
..++....++|...+.||+|+||.||+|...+|+.||+|++..... .....+.+.+|++++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 4566778899999999999999999999988899999999865322 2223478899999999999999999
Q ss_pred cceEEee-----CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCee
Q 007107 473 LAGYCAE-----HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANIL 547 (618)
Q Consensus 473 l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiL 547 (618)
+++++.. ....++||||++ |+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 166 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD---QRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNIL 166 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEE
Confidence 9999854 336899999998 688888762 345789999999999999999999999 9999999999999
Q ss_pred ecCCCCcEEeeccccccCCCCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 548 LDDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 548 l~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++.++.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 235 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFR 235 (362)
T ss_dssp ECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred EcCCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCC
Confidence 9999999999999997543322 2234578999999999987 678999999999999999999999996
No 180
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=307.48 Aligned_cols=202 Identities=21% Similarity=0.249 Sum_probs=165.2
Q ss_pred hhcCCcccceeccCccceEEEEEEc----CCcEEEEEEcCcccccHHH---------HHHHHHHHHHhhcCCCCcccccc
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA----NGKIMAVKKIDNAALSLQE---------EDNFLEAVSNMSRLRHPNIVTLA 474 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~---------~~~~~~e~~~l~~l~h~niv~l~ 474 (618)
..++|...+.||+|+||.||+|... .+..+|+|++......... ...+.+|+..+..++||||++++
T Consensus 35 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~ 114 (345)
T 2v62_A 35 EGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFY 114 (345)
T ss_dssp TSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEE
T ss_pred cCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceee
Confidence 3467999999999999999999876 5788999998754322111 12356788889999999999999
Q ss_pred eEEee----CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC
Q 007107 475 GYCAE----HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD 550 (618)
Q Consensus 475 ~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~ 550 (618)
+++.. ....++||||+ +++|.+++.. ...+++..++.++.||+.||+|||+. +|+||||||+|||++.
T Consensus 115 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~ 186 (345)
T 2v62_A 115 GSGLTEFKGRSYRFMVMERL-GIDLQKISGQ----NGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGY 186 (345)
T ss_dssp EEEEEESSSCEEEEEEEECE-EEEHHHHCBG----GGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEES
T ss_pred cccccccCCCcEEEEEEecc-CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEcc
Confidence 99988 67889999999 9999999963 23789999999999999999999999 9999999999999998
Q ss_pred CC--CcEEeeccccccCCCCCc------cccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 551 EL--NPHLSDCGLAALTPNTER------QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 551 ~~--~~kl~Dfgl~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++ .+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||+
T Consensus 187 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~ 261 (345)
T 2v62_A 187 KNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWE 261 (345)
T ss_dssp SSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTG
T ss_pred CCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 77 999999999976542211 11234579999999999999999999999999999999999999994
No 181
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-35 Score=305.34 Aligned_cols=203 Identities=29% Similarity=0.412 Sum_probs=166.9
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHH---HHHHHHHHHHHhhcCCCCcccccceEEeeCCe
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQ---EEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (618)
...++|...+.||+|+||.||+|... +|+.||+|++........ ....+.+|++++++++||||+++++++...+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999876 589999999975432211 12467899999999999999999999999999
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccc
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~ 562 (618)
.++||||+++ +|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 87 ~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLA 159 (346)
T ss_dssp CEEEEECCSE-EHHHHHTT---CCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGG
T ss_pred eEEEEEcCCC-CHHHHHHh---cCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccc
Confidence 9999999986 88888752 345688899999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 563 ALTPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+....... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.
T Consensus 160 ~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~ 214 (346)
T 1ua2_A 160 KSFGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLP 214 (346)
T ss_dssp STTTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred eeccCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCC
Confidence 87643322 23345789999999999764 58999999999999999999999985
No 182
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.5e-35 Score=314.52 Aligned_cols=197 Identities=28% Similarity=0.388 Sum_probs=165.0
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC------C
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH------G 481 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 481 (618)
..+|...+.||+|+||.||+|.+. +|+.||||++.... ..+.+|++++++++||||+++++++... .
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~ 126 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 126 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcce
Confidence 346888999999999999999886 58999999986432 1234689999999999999999988542 1
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC-CCcEEeecc
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE-LNPHLSDCG 560 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~-~~~kl~Dfg 560 (618)
..++||||+++ ++.++++........+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||
T Consensus 127 ~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG 202 (420)
T 1j1b_A 127 YLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG 202 (420)
T ss_dssp EEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred eEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccch
Confidence 36799999985 67666654444567899999999999999999999999 99999999999999955 568999999
Q ss_pred ccccCCCCCccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+++....... .....||+.|+|||++.+. .|+.++|||||||++|||++|+.||.
T Consensus 203 ~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~ 258 (420)
T 1j1b_A 203 SAKQLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 258 (420)
T ss_dssp TCEECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred hhhhcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCC
Confidence 9987643322 2346789999999999765 78999999999999999999999996
No 183
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3e-35 Score=304.68 Aligned_cols=204 Identities=19% Similarity=0.368 Sum_probs=176.3
Q ss_pred hhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHH---------------HHHHHHHHHHHhhcCCCCccc
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQ---------------EEDNFLEAVSNMSRLRHPNIV 471 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~---------------~~~~~~~e~~~l~~l~h~niv 471 (618)
...++|...+.||+|+||.||+|.. +|+.||+|++........ ..+.+.+|++++++++||||+
T Consensus 28 ~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~ 106 (348)
T 2pml_X 28 KYINDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCL 106 (348)
T ss_dssp EEETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBC
T ss_pred cccCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcc
Confidence 3457899999999999999999998 899999999865432211 127789999999999999999
Q ss_pred ccceEEeeCCeEEEEEEecCCCChhhhhhc----ccCCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCCCceecCCCCCCe
Q 007107 472 TLAGYCAEHGQRLLVYEYVGNGNLHDMLHF----ADDSSKNLTWNARVRVALGTARALEYLHE-VCLPSVVHRNFKSANI 546 (618)
Q Consensus 472 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~----~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~iiH~Dlkp~Ni 546 (618)
++++++.+.+..++||||+++++|.++++. .......+++..+..++.|++.||+|||+ . +|+||||||+||
T Consensus 107 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Ni 183 (348)
T 2pml_X 107 TCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNI 183 (348)
T ss_dssp CCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGE
T ss_pred eEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhE
Confidence 999999999999999999999999998321 11225679999999999999999999999 8 999999999999
Q ss_pred eecCCCCcEEeeccccccCCCCCccccccccccccccCccccccC-Cccc-cchhhhHHHHHHHHHhCCCCCC
Q 007107 547 LLDDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSG-IYTV-KSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 547 Ll~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwSlG~il~elltg~~Pf~ 617 (618)
+++.++.+||+|||++...... ......||+.|+|||++.+. .++. ++||||||+++|||++|+.||.
T Consensus 184 l~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 253 (348)
T 2pml_X 184 LMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFS 253 (348)
T ss_dssp EECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999765432 23345799999999999887 6766 9999999999999999999996
No 184
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=3.6e-35 Score=293.75 Aligned_cols=201 Identities=28% Similarity=0.479 Sum_probs=167.9
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
..++|...+.||+|+||.||+|... +|+.||+|++..... .....+.+.+|++.++.++||||+++++++...+..++
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM 88 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence 4567899999999999999999886 689999999865332 11234578899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 89 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 161 (276)
T 2h6d_A 89 VMEYVSGGELFDYICK----HGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMM 161 (276)
T ss_dssp EEECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred EEeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeeccccccc
Confidence 9999999999999963 34689999999999999999999999 9999999999999999999999999999776
Q ss_pred CCCCccccccccccccccCccccccCCc-cccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... ......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||+
T Consensus 162 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~ 212 (276)
T 2h6d_A 162 SDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212 (276)
T ss_dssp CC---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CCCc--ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCC
Confidence 4332 2234578999999999988765 689999999999999999999996
No 185
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=5.6e-35 Score=305.33 Aligned_cols=196 Identities=23% Similarity=0.370 Sum_probs=170.4
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE---
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR--- 483 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~--- 483 (618)
..++|...+.||+|+||.||+|... +|+.||+|++..........+.+.+|+.+++.++||||+++++++...+..
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 3568999999999999999999875 589999999987665666678899999999999999999999999877654
Q ss_pred ---EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecc
Q 007107 484 ---LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (618)
Q Consensus 484 ---~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfg 560 (618)
++||||++ ++|.+++. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMG------MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred eeEEEEEcccc-ccHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecC
Confidence 99999997 58887773 3489999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 190 ~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 243 (371)
T 4exu_A 190 LARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK 243 (371)
T ss_dssp CC------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred cccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCC
Confidence 99765432 234578999999999987 678999999999999999999999996
No 186
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1e-35 Score=306.26 Aligned_cols=209 Identities=26% Similarity=0.433 Sum_probs=178.2
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEcC------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEE
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFAN------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYC 477 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 477 (618)
.+...++|...+.||+|+||.||+|.... ++.||+|.+.... .....+.+.+|+++++++ +||||+++++++
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 34456789999999999999999998753 2479999997554 344567899999999999 899999999999
Q ss_pred eeCCeEEEEEEecCCCChhhhhhcccC----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCee
Q 007107 478 AEHGQRLLVYEYVGNGNLHDMLHFADD----------SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANIL 547 (618)
Q Consensus 478 ~~~~~~~lv~e~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiL 547 (618)
...+..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+|||
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 196 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVL 196 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCE
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEE
Confidence 999999999999999999999864321 134689999999999999999999999 9999999999999
Q ss_pred ecCCCCcEEeeccccccCCCCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 548 LDDELNPHLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 548 l~~~~~~kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
++.++.+||+|||++........ .......||+.|+|||++.+..++.++||||||+++|||+| |+.||.
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 268 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP 268 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCc
Confidence 99999999999999976533222 22234567889999999999999999999999999999999 999986
No 187
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=5.2e-35 Score=296.03 Aligned_cols=203 Identities=29% Similarity=0.471 Sum_probs=170.1
Q ss_pred hhcCCcccceeccCccceEEEEEEcC----CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEe-eCCe
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCA-EHGQ 482 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~ 482 (618)
...+|...+.||+|+||.||+|.+.+ +..+|+|.+.... .....+.+.+|++++++++||||+++++++. .++.
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 101 (298)
T 3f66_A 23 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 101 (298)
T ss_dssp GGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred cceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC-CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc
Confidence 34568888999999999999998653 2358999887533 4455678999999999999999999999865 4567
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccc
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~ 562 (618)
.++||||+++|+|.++++. ....+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||++
T Consensus 102 ~~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a 175 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLA 175 (298)
T ss_dssp CEEEEECCTTCBHHHHHHC---TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGG
T ss_pred eEEEEeCCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccc
Confidence 8999999999999999963 345689999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCc---cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 563 ALTPNTER---QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
+....... .......||+.|+|||.+.+..++.++||||||+++|||++ |.+||.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~ 234 (298)
T 3f66_A 176 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 234 (298)
T ss_dssp CCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred ccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCc
Confidence 86643322 12234567889999999999999999999999999999999 566664
No 188
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.1e-35 Score=326.16 Aligned_cols=200 Identities=26% Similarity=0.416 Sum_probs=166.6
Q ss_pred cCCcccc-eeccCccceEEEEEEc---CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 410 NSFSQEF-LIGEGSLGRVYRAEFA---NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 410 ~~~~~~~-~Lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
.++...+ .||+|+||.||+|.+. ++..||||+++... .....+.+.+|++++++++||||+++++++.. +..++
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~l 412 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML 412 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEE
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEE
Confidence 3444444 7999999999999764 46679999998653 23346779999999999999999999999976 56899
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+++|+|.++++. ....+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++..
T Consensus 413 v~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~ 486 (613)
T 2ozo_A 413 VMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKAL 486 (613)
T ss_dssp EEECCTTCBHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTC
T ss_pred EEEeCCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccc
Confidence 9999999999999863 345699999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCcccc--ccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 566 PNTERQVS--TQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
........ ....+|+.|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 487 ~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~ 541 (613)
T 2ozo_A 487 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK 541 (613)
T ss_dssp C--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred cCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 54332221 22346689999999999999999999999999999998 999996
No 189
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.7e-35 Score=302.20 Aligned_cols=201 Identities=27% Similarity=0.464 Sum_probs=164.9
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcE----EEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKI----MAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~----vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
.++|...+.||+|+||.||+|.+. +++. |++|.+.... .....+.+.+|++++++++||||+++++++.... .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~ 91 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS-SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-E
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-c
Confidence 467999999999999999999865 3443 5777775433 2334577899999999999999999999998754 8
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++|+||+.+|+|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 92 ~~v~~~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 92 QLITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEECCCSSCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred eEEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 899999999999999864 245689999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 564 LTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 564 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||+
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~ 221 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCC
Confidence 6643322 22233467889999999999999999999999999999999 999996
No 190
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=3.7e-35 Score=301.33 Aligned_cols=203 Identities=30% Similarity=0.493 Sum_probs=170.0
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEE--EEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIM--AVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~v--avK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 484 (618)
.++|...+.||+|+||.||+|... ++..+ |+|.++... .....+.+.+|+++++++ +||||+++++++.+.+..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc-chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 467889999999999999999765 46544 899886432 333456789999999999 8999999999999999999
Q ss_pred EEEEecCCCChhhhhhccc------------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCC
Q 007107 485 LVYEYVGNGNLHDMLHFAD------------DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL 552 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~ 552 (618)
+||||+++++|.++++... .....+++..++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCC
Confidence 9999999999999997432 2235789999999999999999999999 999999999999999999
Q ss_pred CcEEeeccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 553 NPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 553 ~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.+||+|||+++..... .......+++.|+|||++.+..++.++||||||+++|||+| |+.||.
T Consensus 180 ~~kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~ 243 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 243 (327)
T ss_dssp CEEECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred eEEEcccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCC
Confidence 9999999998744321 11223457889999999999999999999999999999998 999995
No 191
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.1e-35 Score=310.64 Aligned_cols=198 Identities=15% Similarity=0.123 Sum_probs=153.7
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-cHHHHHHHHHHH---HHhhcCCCCcccccc-------e
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-SLQEEDNFLEAV---SNMSRLRHPNIVTLA-------G 475 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~e~---~~l~~l~h~niv~l~-------~ 475 (618)
....|...+.||+|+||.||+|.+. +|+.||+|++..... .....+.+.+|+ +.++. +||||++++ +
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d 138 (371)
T 3q60_A 60 GERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSD 138 (371)
T ss_dssp CEEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCE
T ss_pred CceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeeh
Confidence 3456889999999999999999876 689999999987554 334456677774 45555 799987754 4
Q ss_pred EEeeC-----------------CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHH------HHHHHHHHHHHHHHhhcC
Q 007107 476 YCAEH-----------------GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNAR------VRVALGTARALEYLHEVC 532 (618)
Q Consensus 476 ~~~~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~i~~~L~~LH~~~ 532 (618)
++... ...++||||++ |+|.++++... ..+.+..+ ..++.||+.||+|||++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~- 213 (371)
T 3q60_A 139 AVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD---FVYVFRGDEGILALHILTAQLIRLAANLQSK- 213 (371)
T ss_dssp EEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH---HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred heecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc---cccchhhhhhhhhHHHHHHHHHHHHHHHHHC-
Confidence 55433 23799999999 89999997432 23344455 67789999999999999
Q ss_pred CCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccccccccccccccCcccccc--CCccccchhhhHHHHHHHHH
Q 007107 533 LPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALS--GIYTVKSDVYSFGVVMLELL 610 (618)
Q Consensus 533 ~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~ell 610 (618)
+|+||||||+|||++.++.+||+|||+++...... ....+|+.|+|||++.+ ..++.++|||||||++|||+
T Consensus 214 --~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~ell 287 (371)
T 3q60_A 214 --GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVW 287 (371)
T ss_dssp --TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEE----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHH
T ss_pred --CCccCcCCHHHEEECCCCCEEEEecceeeecCCCc----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHH
Confidence 99999999999999999999999999998664321 13467799999999987 67999999999999999999
Q ss_pred hCCCCCC
Q 007107 611 TGRKPLD 617 (618)
Q Consensus 611 tg~~Pf~ 617 (618)
+|+.||.
T Consensus 288 tg~~Pf~ 294 (371)
T 3q60_A 288 CLFLPFG 294 (371)
T ss_dssp HSSCSTT
T ss_pred hCCCCCC
Confidence 9999996
No 192
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=7.4e-35 Score=303.67 Aligned_cols=199 Identities=26% Similarity=0.393 Sum_probs=171.6
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC-----Ce
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH-----GQ 482 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 482 (618)
.++|...+.||+|+||.||+|... +++.||+|++.... .....+.+.+|++++++++||||+++++++... ..
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc-CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 467999999999999999999875 58899999997533 344557789999999999999999999999765 36
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccc
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLA 562 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~ 562 (618)
.++||||++ |+|.++++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 105 ~~iv~e~~~-~~L~~~l~-----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp EEEEEECCS-EEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEcccC-cCHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcce
Confidence 899999997 58999886 24689999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCcc--ccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 563 ALTPNTERQ--VSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+........ ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 233 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 233 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCC
Confidence 866533222 1234589999999998765 458999999999999999999999996
No 193
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.1e-35 Score=309.51 Aligned_cols=198 Identities=26% Similarity=0.385 Sum_probs=165.4
Q ss_pred hhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCe-----
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ----- 482 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 482 (618)
...+|...+.||+|+||.||+|++.++..+|+|++...... ..+|+++++.++||||+++++++...+.
T Consensus 38 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~ 111 (394)
T 4e7w_A 38 REIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEV 111 (394)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCE
T ss_pred ccceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCce
Confidence 34579999999999999999999988778999988643221 2368999999999999999999965443
Q ss_pred -EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeec-CCCCcEEeecc
Q 007107 483 -RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD-DELNPHLSDCG 560 (618)
Q Consensus 483 -~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~-~~~~~kl~Dfg 560 (618)
.++||||++++ +.+.+.........+++..+..++.||++||+|||+. +|+||||||+|||++ .++.+||+|||
T Consensus 112 ~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG 187 (394)
T 4e7w_A 112 FLNLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFG 187 (394)
T ss_dssp EEEEEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEEEEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCC
Confidence 78999999874 4443432223456799999999999999999999999 999999999999999 79999999999
Q ss_pred ccccCCCCCccccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+++....... .....||+.|+|||++.+. .|+.++|||||||++|||++|+.||.
T Consensus 188 ~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 243 (394)
T 4e7w_A 188 SAKILIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFP 243 (394)
T ss_dssp TCEECCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CcccccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 9987643332 2345789999999999765 58999999999999999999999996
No 194
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.9e-35 Score=300.95 Aligned_cols=209 Identities=27% Similarity=0.468 Sum_probs=170.8
Q ss_pred eehhhhhhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEE
Q 007107 400 YTVASLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYC 477 (618)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 477 (618)
+....+....++|+..+.||+|+||.||+|.+. +|+.||+|++..... ....+.+|+++++++ +||||+++++++
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 90 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAF 90 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---TTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc---cHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence 444556667889999999999999999999875 689999999864432 345688899999988 799999999999
Q ss_pred ee------CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC
Q 007107 478 AE------HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE 551 (618)
Q Consensus 478 ~~------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~ 551 (618)
.. .+..++||||+++++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~ 165 (326)
T 2x7f_A 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTEN 165 (326)
T ss_dssp EECC--CCCCEEEEEEECCTTEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTT
T ss_pred eeccCccccceEEEEEEcCCCCcHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCC
Confidence 77 46789999999999999999743 235689999999999999999999999 99999999999999999
Q ss_pred CCcEEeeccccccCCCCCccccccccccccccCccccc-----cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 552 LNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 552 ~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+.+||+|||++........ ......||+.|+|||++. +..++.++|||||||++|||++|+.||.
T Consensus 166 ~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 235 (326)
T 2x7f_A 166 AEVKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLC 235 (326)
T ss_dssp CCEEECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTT
T ss_pred CCEEEeeCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCC
Confidence 9999999999976543221 223457999999999997 5668999999999999999999999995
No 195
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.4e-35 Score=327.82 Aligned_cols=194 Identities=29% Similarity=0.435 Sum_probs=166.2
Q ss_pred ceeccCccceEEEEEEc---CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEEEecCC
Q 007107 416 FLIGEGSLGRVYRAEFA---NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYVGN 492 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 492 (618)
+.||+|+||.||+|.+. .++.||||+++.........+++.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999654 46789999998765555557889999999999999999999999864 568899999999
Q ss_pred CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCcc-
Q 007107 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQ- 571 (618)
Q Consensus 493 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~- 571 (618)
|+|.++++ ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 454 g~L~~~l~----~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHH----HCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHh----hCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 99999996 345689999999999999999999999 9999999999999999999999999999876543322
Q ss_pred -ccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 572 -VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 572 -~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~ 574 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 574 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 2233457889999999999999999999999999999998 999996
No 196
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=4.9e-35 Score=299.74 Aligned_cols=200 Identities=24% Similarity=0.388 Sum_probs=167.9
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCccccc------HHHHHHHHHHHHHhhcCCCCcccccceEEeeC
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS------LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH 480 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 480 (618)
..++|...+.||+|+||.||+|... +++.||||.+...... ......+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 4567999999999999999999876 4889999998754321 12234578999999999999999999998765
Q ss_pred CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCC---cEEe
Q 007107 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN---PHLS 557 (618)
Q Consensus 481 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~---~kl~ 557 (618)
+ .++||||+++++|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +||+
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp S-EEEEEECCTTEETHHHHS----TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred c-eEEEEecCCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEc
Confidence 4 899999999999999886 346789999999999999999999999 9999999999999987654 9999
Q ss_pred eccccccCCCCCccccccccccccccCccccc---cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 558 DCGLAALTPNTERQVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 558 Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|||++...... .......||+.|+|||++. ...++.++|||||||++|||++|+.||.
T Consensus 160 Dfg~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 220 (322)
T 2ycf_A 160 DFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220 (322)
T ss_dssp CCTTCEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCccceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence 99999876432 2223457999999999974 4678999999999999999999999995
No 197
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.5e-35 Score=297.20 Aligned_cols=200 Identities=29% Similarity=0.491 Sum_probs=170.7
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
...++|+..+.||+|+||.||+|... +|+.||+|.+.... ..+.+.+|++++++++||||+++++++...+..++
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 34567899999999999999999876 48999999986543 23568899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+++++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 102 v~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 175 (314)
T 3com_A 102 VMEYCGAGSVSDIIRL---RNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175 (314)
T ss_dssp EEECCTTEEHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EeecCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhh
Confidence 9999999999999863 245789999999999999999999999 9999999999999999999999999999765
Q ss_pred CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 176 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 226 (314)
T 3com_A 176 TDTMA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYA 226 (314)
T ss_dssp BTTBS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTT
T ss_pred hhhcc-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 43221 2234578999999999999999999999999999999999999996
No 198
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-34 Score=293.75 Aligned_cols=200 Identities=30% Similarity=0.441 Sum_probs=169.6
Q ss_pred cCCcccceeccCccceEEEEEEcC----CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE-E
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR-L 484 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-~ 484 (618)
..|...+.||+|+||.||+|.+.+ +..+|+|.+.... .....+.+.+|++++++++||||+++++++.+.+.. +
T Consensus 21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 99 (298)
T 3pls_A 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT-EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPH 99 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc-cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcE
Confidence 356667899999999999997643 2379999987533 445567889999999999999999999999876655 9
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||+.+|+|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 100 ~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 100 VLLPYMCHGDLLQFIRS---PQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp EEECCCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred EEEecccCCCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 99999999999999963 346789999999999999999999999 999999999999999999999999999976
Q ss_pred CCCCCc---cccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCC
Q 007107 565 TPNTER---QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 565 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf 616 (618)
...... .......+|+.|+|||.+.+..++.++||||||+++|||++|..||
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~ 228 (298)
T 3pls_A 174 ILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP 228 (298)
T ss_dssp TTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCT
T ss_pred ccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCC
Confidence 543221 1223356889999999999999999999999999999999955554
No 199
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=3.6e-35 Score=301.40 Aligned_cols=201 Identities=27% Similarity=0.398 Sum_probs=174.9
Q ss_pred hcCCcccceeccCccceEEEEEE-----cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEe--eCC
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEF-----ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCA--EHG 481 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~ 481 (618)
.++|+..+.||+|+||.||+|++ .+++.||+|++.... ....+.+.+|++++++++||||+++++++. +..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 99 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQ 99 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSC
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCc
Confidence 46788899999999999999984 358899999997543 445677999999999999999999999886 456
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccc
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl 561 (618)
..++||||+++++|.++++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred eEEEEEeecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccc
Confidence 789999999999999999742 24589999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCcc--ccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNTERQ--VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+......... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~ 231 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSC 231 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred ceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCc
Confidence 9876543322 2233568889999999999999999999999999999999999984
No 200
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-34 Score=298.29 Aligned_cols=198 Identities=26% Similarity=0.394 Sum_probs=162.3
Q ss_pred hhhhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhc--CCCCcccccceEEeeC-
Q 007107 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR--LRHPNIVTLAGYCAEH- 480 (618)
Q Consensus 404 ~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~- 480 (618)
......++|+..+.||+|+||.||+|++. |+.||+|++.... ...+..|.+++.. ++||||+++++++...
T Consensus 31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~ 104 (337)
T 3mdy_A 31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE-----EASWFRETEIYQTVLMRHENILGFIAADIKGT 104 (337)
T ss_dssp HHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred cccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc-----cchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence 34556678999999999999999999886 8999999985432 2333444454444 4899999999999887
Q ss_pred ---CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-----CCCceecCCCCCCeeecCCC
Q 007107 481 ---GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC-----LPSVVHRNFKSANILLDDEL 552 (618)
Q Consensus 481 ---~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~iiH~Dlkp~NiLl~~~~ 552 (618)
...++||||+++|+|.++++. ..+++..++.++.|++.||+|||+.. .++|+||||||+|||++.++
T Consensus 105 ~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~ 179 (337)
T 3mdy_A 105 GSWTQLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNG 179 (337)
T ss_dssp GGGCEEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTS
T ss_pred CCCCceEEEEeccCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCC
Confidence 789999999999999999962 46899999999999999999999761 23899999999999999999
Q ss_pred CcEEeeccccccCCCCCccc---cccccccccccCccccccCCcccc------chhhhHHHHHHHHHhC
Q 007107 553 NPHLSDCGLAALTPNTERQV---STQMVGAFGYSAPEFALSGIYTVK------SDVYSFGVVMLELLTG 612 (618)
Q Consensus 553 ~~kl~Dfgl~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~------~DvwSlG~il~elltg 612 (618)
.+||+|||+++......... .....||+.|+|||++.+..+..+ +|||||||++|||+||
T Consensus 180 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg 248 (337)
T 3mdy_A 180 TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR 248 (337)
T ss_dssp CEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhc
Confidence 99999999997654332221 124579999999999987766654 9999999999999999
No 201
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.5e-35 Score=296.90 Aligned_cols=196 Identities=27% Similarity=0.406 Sum_probs=168.9
Q ss_pred hhcCCcccceeccCccceEEEEEEcC-C-------cEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-G-------KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g-------~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 479 (618)
..++|...+.||+|+||.||+|.... + ..||+|++.... ....+.+.+|++++++++||||+++++++..
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 83 (289)
T 4fvq_A 6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH--RNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83 (289)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG--GGGHHHHHHHHHHHHTSCCTTBCCEEEEECC
T ss_pred chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe
Confidence 34678899999999999999997653 3 479999986543 2345678999999999999999999999999
Q ss_pred CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCC------
Q 007107 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN------ 553 (618)
Q Consensus 480 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~------ 553 (618)
.+..++||||+++|+|.++++. ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.
T Consensus 84 ~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 157 (289)
T 4fvq_A 84 GDENILVQEFVKFGSLDTYLKK---NKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNP 157 (289)
T ss_dssp TTCCEEEEECCTTCBHHHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBC
T ss_pred CCCCEEEEECCCCCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccccccc
Confidence 9999999999999999999973 233489999999999999999999999 9999999999999998887
Q ss_pred --cEEeeccccccCCCCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhC-CCCC
Q 007107 554 --PHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTG-RKPL 616 (618)
Q Consensus 554 --~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg-~~Pf 616 (618)
+||+|||++...... ....||+.|+|||++.+ ..++.++||||||+++|||++| ..||
T Consensus 158 ~~~kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~ 219 (289)
T 4fvq_A 158 PFIKLSDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPL 219 (289)
T ss_dssp CEEEECCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred ceeeeccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCc
Confidence 999999998655322 23468899999999987 6789999999999999999995 4444
No 202
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2.3e-35 Score=299.24 Aligned_cols=207 Identities=27% Similarity=0.423 Sum_probs=158.3
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
...++|...+.||+|+||.||+|... +++.||+|++..... ....+.+.+|++.+++++||||+++++++...+..++
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 34578999999999999999999764 689999999865432 2345678899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhccc----CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccc
Q 007107 486 VYEYVGNGNLHDMLHFAD----DSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl 561 (618)
||||+++++|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccc
Confidence 999999999999986321 1245689999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCc----cccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNTER----QVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+........ .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 228 (303)
T 2vwi_A 168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH 228 (303)
T ss_dssp HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence 876543221 11234579999999999976 568999999999999999999999996
No 203
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.3e-35 Score=310.90 Aligned_cols=200 Identities=26% Similarity=0.446 Sum_probs=154.4
Q ss_pred cCCcc-cceeccCccceEEEEEEc---CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee--CCeE
Q 007107 410 NSFSQ-EFLIGEGSLGRVYRAEFA---NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE--HGQR 483 (618)
Q Consensus 410 ~~~~~-~~~Lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 483 (618)
+.|.. .++||+|+||.||+|.+. +++.||+|++...... ..+.+|++++++++||||+++++++.. ....
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 95 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS----MSACREIALLRELKHPNVISLQKVFLSHADRKV 95 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC----HHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC----HHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeE
Confidence 44555 447999999999999876 4789999999755432 357789999999999999999999954 6789
Q ss_pred EEEEEecCCCChhhhhhcccC-----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeee----cCCCCc
Q 007107 484 LLVYEYVGNGNLHDMLHFADD-----SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL----DDELNP 554 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~-----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl----~~~~~~ 554 (618)
++||||++ |+|.+++..... ....+++..++.++.||+.||+|||+. +|+||||||+|||+ +.++.+
T Consensus 96 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~ 171 (405)
T 3rgf_A 96 WLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRV 171 (405)
T ss_dssp EEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCE
T ss_pred EEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcE
Confidence 99999997 488887753321 223589999999999999999999999 99999999999999 677899
Q ss_pred EEeeccccccCCCCCc--cccccccccccccCccccccC-CccccchhhhHHHHHHHHHhCCCCCC
Q 007107 555 HLSDCGLAALTPNTER--QVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 555 kl~Dfgl~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
||+|||+++....... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||.
T Consensus 172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 237 (405)
T 3rgf_A 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 237 (405)
T ss_dssp EECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred EEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCC
Confidence 9999999987643221 222346899999999999874 58999999999999999999999995
No 204
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.4e-34 Score=307.74 Aligned_cols=198 Identities=22% Similarity=0.313 Sum_probs=169.5
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC------CCCcccccceEEee
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL------RHPNIVTLAGYCAE 479 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~~ 479 (618)
....+|+..+.||+|+||.||+|... +++.||||++.... .....+.+|+++++.+ .|+||+++++++..
T Consensus 94 ~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~ 170 (429)
T 3kvw_A 94 HVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK---RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF 170 (429)
T ss_dssp EETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE
T ss_pred cccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc---chHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc
Confidence 34567999999999999999999776 48999999997532 2344566666666555 67899999999999
Q ss_pred CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCC--cEEe
Q 007107 480 HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN--PHLS 557 (618)
Q Consensus 480 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~--~kl~ 557 (618)
.+..++||||++ ++|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +||+
T Consensus 171 ~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~ 244 (429)
T 3kvw_A 171 RNHICMTFELLS-MNLYELIKKN--KFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVI 244 (429)
T ss_dssp TTEEEEEECCCC-CBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEEC
T ss_pred CCeEEEEEeccC-CCHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEe
Confidence 999999999996 6899988643 234589999999999999999999999 9999999999999999887 9999
Q ss_pred eccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 558 DCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 558 Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 245 DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~ 300 (429)
T 3kvw_A 245 DFGSSCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLP 300 (429)
T ss_dssp CCTTCEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred ecccceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCC
Confidence 99999765432 224578999999999999999999999999999999999999996
No 205
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=4.3e-35 Score=300.56 Aligned_cols=203 Identities=27% Similarity=0.414 Sum_probs=169.6
Q ss_pred hhhcCCcccceeccCccceEEEEEE--cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC---CCCcccccceEEe---
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEF--ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL---RHPNIVTLAGYCA--- 478 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~--~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~--- 478 (618)
...++|...+.||+|+||.||+|.. .+|+.||+|++............+.+|+++++.+ +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 4557899999999999999999987 3588999999875433222223455566655544 8999999999987
Q ss_pred --eCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEE
Q 007107 479 --EHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHL 556 (618)
Q Consensus 479 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl 556 (618)
.....++||||++ |+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl 161 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKL 161 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHS--CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEE
Confidence 4567899999998 6999998643 234589999999999999999999999 9999999999999999999999
Q ss_pred eeccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 557 SDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 557 ~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+|||+++...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 162 ~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 220 (326)
T 1blx_A 162 ADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR 220 (326)
T ss_dssp CSCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred ecCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCC
Confidence 9999997654322 2334678999999999999999999999999999999999999996
No 206
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=7.7e-35 Score=294.27 Aligned_cols=199 Identities=21% Similarity=0.315 Sum_probs=166.8
Q ss_pred hhcCCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEE-eeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC-AEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~l 485 (618)
..++|...+.||+|+||.||+|.. .+++.||+|++.... ....+.+|+++++.++|++++..++++ ...+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT----KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc----cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEE
Confidence 457899999999999999999986 468999999865432 224577899999999998888777766 55678899
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeee---cCCCCcEEeecccc
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL---DDELNPHLSDCGLA 562 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl---~~~~~~kl~Dfgl~ 562 (618)
||||+ +++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||++
T Consensus 83 v~e~~-~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a 155 (296)
T 4hgt_A 83 VMELL-GPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEECC-CCBHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEcc-CCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence 99999 8999999863 245699999999999999999999999 99999999999999 78899999999999
Q ss_pred ccCCCCCc------cccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 563 ALTPNTER------QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 216 (296)
T 4hgt_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 216 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTS
T ss_pred eeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCc
Confidence 86643322 12234579999999999999999999999999999999999999996
No 207
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=5.2e-35 Score=298.28 Aligned_cols=209 Identities=24% Similarity=0.334 Sum_probs=174.2
Q ss_pred eehhhhhhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC--CCcccccceEE
Q 007107 400 YTVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR--HPNIVTLAGYC 477 (618)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~ 477 (618)
+....+....++|...+.||+|+||.||+|...+++.||+|++..........+.+.+|++++.+++ ||||+++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~ 97 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence 3444556667889999999999999999999888999999999766556667788999999999997 59999999999
Q ss_pred eeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEe
Q 007107 478 AEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLS 557 (618)
Q Consensus 478 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~ 557 (618)
...+..++||| +.+++|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||++++ +.+||+
T Consensus 98 ~~~~~~~lv~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~ 168 (313)
T 3cek_A 98 ITDQYIYMVME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLI 168 (313)
T ss_dssp ECSSEEEEEEC-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEEC
T ss_pred ecCCEEEEEEe-cCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEe
Confidence 99999999999 567899999973 35789999999999999999999999 9999999999999965 799999
Q ss_pred eccccccCCCCCcc-ccccccccccccCcccccc-----------CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 558 DCGLAALTPNTERQ-VSTQMVGAFGYSAPEFALS-----------GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 558 Dfgl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|||++......... ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||+
T Consensus 169 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 240 (313)
T 3cek_A 169 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 240 (313)
T ss_dssp CCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred eccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchh
Confidence 99999866433221 2234579999999999875 468889999999999999999999996
No 208
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=6.9e-35 Score=299.33 Aligned_cols=207 Identities=26% Similarity=0.389 Sum_probs=172.3
Q ss_pred hhhcCCcccceeccCccceEEEEEE------cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEF------ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH 480 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 480 (618)
...++|...+.||+|+||.||+|.+ .+++.||+|++.... ......++.+|+.++++++||||+++++++...
T Consensus 27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 105 (327)
T 2yfx_A 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105 (327)
T ss_dssp CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc-chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC
Confidence 3457899999999999999999974 247789999997443 445567889999999999999999999999999
Q ss_pred CeEEEEEEecCCCChhhhhhcccC---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC---CCCc
Q 007107 481 GQRLLVYEYVGNGNLHDMLHFADD---SSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---ELNP 554 (618)
Q Consensus 481 ~~~~lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~---~~~~ 554 (618)
+..++||||+++++|.++++.... ....+++..++.++.|++.||+|||+. +|+||||||+|||++. +..+
T Consensus 106 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~ 182 (327)
T 2yfx_A 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA 182 (327)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceE
Confidence 999999999999999999975432 124589999999999999999999999 9999999999999984 4469
Q ss_pred EEeeccccccCCCCCc-cccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 555 HLSDCGLAALTPNTER-QVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 555 kl~Dfgl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
||+|||++........ .......||+.|+|||++.+..++.++||||||+++|||+| |+.||.
T Consensus 183 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 247 (327)
T 2yfx_A 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYP 247 (327)
T ss_dssp EECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred EECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCC
Confidence 9999999865422211 22234568899999999999999999999999999999998 999986
No 209
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=5e-35 Score=293.80 Aligned_cols=197 Identities=24% Similarity=0.417 Sum_probs=171.8
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee------
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE------ 479 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------ 479 (618)
....+|+..+.||+|+||.||+|.+. +|+.||+|++.... ..+.+|++++++++||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE 81 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcc
Confidence 34567899999999999999999886 69999999987543 246689999999999999999998864
Q ss_pred ----------CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeec
Q 007107 480 ----------HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD 549 (618)
Q Consensus 480 ----------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~ 549 (618)
....++||||+++++|.++++.. ....+++..++.++.|++.||+|||+. +|+||||||+||+++
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 156 (284)
T 2a19_B 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR--RGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLV 156 (284)
T ss_dssp -------CCEEEEEEEEECCCCSCBHHHHHHHG--GGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred cccccccccCcceEEEEEeccCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEc
Confidence 44579999999999999999643 235689999999999999999999999 999999999999999
Q ss_pred CCCCcEEeeccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCC
Q 007107 550 DELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 550 ~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf 616 (618)
+++.+||+|||++........ .....||+.|+|||++.+..++.++||||||+++|||++|..||
T Consensus 157 ~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~ 221 (284)
T 2a19_B 157 DTKQVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA 221 (284)
T ss_dssp ETTEEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSH
T ss_pred CCCCEEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcc
Confidence 999999999999977654322 23457999999999999999999999999999999999999886
No 210
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2e-34 Score=296.26 Aligned_cols=192 Identities=23% Similarity=0.400 Sum_probs=168.7
Q ss_pred hcCCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-CCcccccceEEee--CCeEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAE--HGQRL 484 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~~~ 484 (618)
.++|+..+.||+|+||.||+|.. .+++.||+|+++... .+.+.+|++++++++ ||||+++++++.+ ....+
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 109 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 109 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc-----hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence 36789999999999999999976 468999999987432 456889999999997 9999999999988 56789
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCC-CcEEeeccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL-NPHLSDCGLAA 563 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~-~~kl~Dfgl~~ 563 (618)
+||||+++++|.++++ .+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++
T Consensus 110 lv~e~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~ 179 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179 (330)
T ss_dssp EEEECCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEeccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence 9999999999999885 378899999999999999999999 999999999999999776 89999999998
Q ss_pred cCCCCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 180 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~ 232 (330)
T 3nsz_A 180 FYHPGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 232 (330)
T ss_dssp ECCTTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred EcCCCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 6643322 234578999999999987 678999999999999999999999983
No 211
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=300.29 Aligned_cols=195 Identities=24% Similarity=0.371 Sum_probs=169.0
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCe-----
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ----- 482 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 482 (618)
.++|...+.||+|+||.||+|... +|+.||||++..........+.+.+|+.++++++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 467999999999999999999875 58999999998765555567788999999999999999999999987654
Q ss_pred -EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccc
Q 007107 483 -RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (618)
Q Consensus 483 -~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl 561 (618)
.++||||++ ++|.+++. ..+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 103 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG------LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEecccc-CCHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999997 58887773 3489999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCccccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNTERQVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 173 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 225 (353)
T 3coi_A 173 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK 225 (353)
T ss_dssp TTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSB
T ss_pred ccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 9765422 234578999999999987 678999999999999999999999996
No 212
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.5e-36 Score=306.35 Aligned_cols=190 Identities=29% Similarity=0.445 Sum_probs=149.2
Q ss_pred hcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhc--CCCCcccccceEEeeCC----e
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR--LRHPNIVTLAGYCAEHG----Q 482 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~ 482 (618)
.++|...+.||+|+||.||+|.+. |+.||+|++... ....+.+|.+++.. ++||||+++++++...+ .
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 75 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T-----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc-----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccce
Confidence 357899999999999999999875 899999998643 24556677777776 79999999999998876 7
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCCceecCCCCCCeeecCCCCc
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH--------EVCLPSVVHRNFKSANILLDDELNP 554 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~iiH~Dlkp~NiLl~~~~~~ 554 (618)
.++||||+++|+|.++++. ..+++..+..++.|++.||+||| +. +|+||||||+|||++.++.+
T Consensus 76 ~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~ 147 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTC 147 (303)
T ss_dssp EEEEEECCTTCCHHHHHHH-----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC
T ss_pred eEEEEeccCCCCHHHHHhc-----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCE
Confidence 8999999999999999962 35788889999999999999999 77 99999999999999999999
Q ss_pred EEeeccccccCCCCCcc---ccccccccccccCccccccC------CccccchhhhHHHHHHHHHhC
Q 007107 555 HLSDCGLAALTPNTERQ---VSTQMVGAFGYSAPEFALSG------IYTVKSDVYSFGVVMLELLTG 612 (618)
Q Consensus 555 kl~Dfgl~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlG~il~elltg 612 (618)
||+|||+++........ ......||+.|+|||++.+. .++.++|||||||++|||+||
T Consensus 148 kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g 214 (303)
T 3gxj_A 148 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214 (303)
T ss_dssp -BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGG
T ss_pred EEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhc
Confidence 99999999765433222 12334799999999999876 456789999999999999999
No 213
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-35 Score=306.19 Aligned_cols=196 Identities=21% Similarity=0.274 Sum_probs=168.0
Q ss_pred hcCCcccceeccCccceEEEEEEcC---------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccc-------
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFAN---------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVT------- 472 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~---------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~------- 472 (618)
.++|...+.||+|+||.||+|.... ++.||+|.+... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~ 113 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYS 113 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence 4679999999999999999998764 789999998643 35778999999999999887
Q ss_pred --------cceEEee-CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCC
Q 007107 473 --------LAGYCAE-HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKS 543 (618)
Q Consensus 473 --------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp 543 (618)
+++++.. .+..++||||+ +++|.+++... ....+++..++.++.||+.||+|||+. +|+||||||
T Consensus 114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp 187 (352)
T 2jii_A 114 TPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS--PKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTA 187 (352)
T ss_dssp CTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCG
T ss_pred CCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCH
Confidence 5667766 67889999999 99999999742 135799999999999999999999999 999999999
Q ss_pred CCeeecCCC--CcEEeeccccccCCCCCcc------ccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCC
Q 007107 544 ANILLDDEL--NPHLSDCGLAALTPNTERQ------VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKP 615 (618)
Q Consensus 544 ~NiLl~~~~--~~kl~Dfgl~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~P 615 (618)
+|||++.++ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 188 ~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p 267 (352)
T 2jii_A 188 ENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLP 267 (352)
T ss_dssp GGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred HHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 999999998 8999999999766432211 12335799999999999999999999999999999999999999
Q ss_pred CC
Q 007107 616 LD 617 (618)
Q Consensus 616 f~ 617 (618)
|.
T Consensus 268 f~ 269 (352)
T 2jii_A 268 WT 269 (352)
T ss_dssp TG
T ss_pred cc
Confidence 95
No 214
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.2e-34 Score=291.43 Aligned_cols=201 Identities=28% Similarity=0.412 Sum_probs=174.3
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccc-------cHHHHHHHHHHHHHhhcCC-CCcccccceEEe
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL-------SLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCA 478 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-------~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~ 478 (618)
..++|...+.||+|+||.||+|... +|+.||+|++..... .....+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3568999999999999999999876 589999999864421 1223467789999999995 999999999999
Q ss_pred eCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEee
Q 007107 479 EHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSD 558 (618)
Q Consensus 479 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~D 558 (618)
..+..++||||+++++|.++++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~d 167 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTD 167 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred cCCeEEEEEeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEec
Confidence 99999999999999999999963 35689999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCccccccccccccccCccccc------cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFAL------SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 559 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
||++........ .....||+.|+|||++. ...++.++||||||+++|||++|+.||.
T Consensus 168 fg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~ 230 (298)
T 1phk_A 168 FGFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW 230 (298)
T ss_dssp CTTCEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred ccchhhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCc
Confidence 999977643322 23457899999999985 4568899999999999999999999985
No 215
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.2e-34 Score=299.42 Aligned_cols=202 Identities=28% Similarity=0.429 Sum_probs=171.3
Q ss_pred hhhhhhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhc--CCCCcccccceEEee
Q 007107 402 VASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR--LRHPNIVTLAGYCAE 479 (618)
Q Consensus 402 ~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~ 479 (618)
........++|...+.||+|+||.||+|.+ +|+.||+|++... ....+.+|.+++.. ++||||+++++++..
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 333455667899999999999999999988 4899999998643 24556778887776 789999999999988
Q ss_pred CC----eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHh--------hcCCCCceecCCCCCCee
Q 007107 480 HG----QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH--------EVCLPSVVHRNFKSANIL 547 (618)
Q Consensus 480 ~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~iiH~Dlkp~NiL 547 (618)
.. ..++||||+++|+|.++++. ..+++..++.++.|++.||+||| +. +|+||||||+|||
T Consensus 108 ~~~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIl 179 (342)
T 1b6c_B 108 DNGTWTQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNIL 179 (342)
T ss_dssp CCSSCCCEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEE
T ss_pred cCCccceeEEEEeecCCCcHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEE
Confidence 76 78999999999999999962 46899999999999999999999 77 9999999999999
Q ss_pred ecCCCCcEEeeccccccCCCCCcc---ccccccccccccCccccccC------CccccchhhhHHHHHHHHHhC------
Q 007107 548 LDDELNPHLSDCGLAALTPNTERQ---VSTQMVGAFGYSAPEFALSG------IYTVKSDVYSFGVVMLELLTG------ 612 (618)
Q Consensus 548 l~~~~~~kl~Dfgl~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlG~il~elltg------ 612 (618)
++.++.+||+|||++......... ......||+.|+|||++.+. .++.++|||||||++|||+||
T Consensus 180 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~ 259 (342)
T 1b6c_B 180 VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 259 (342)
T ss_dssp ECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTB
T ss_pred ECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCc
Confidence 999999999999999765433322 22345799999999999876 345789999999999999999
Q ss_pred ----CCCCC
Q 007107 613 ----RKPLD 617 (618)
Q Consensus 613 ----~~Pf~ 617 (618)
+.||.
T Consensus 260 ~~~~~~p~~ 268 (342)
T 1b6c_B 260 HEDYQLPYY 268 (342)
T ss_dssp CCCCCCTTT
T ss_pred ccccccCcc
Confidence 78885
No 216
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=8.7e-35 Score=299.50 Aligned_cols=206 Identities=22% Similarity=0.362 Sum_probs=159.3
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-CCcccccceEEe----
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCA---- 478 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~---- 478 (618)
++....+|...+.||+|+||.||+|.+. +++.||+|++... .....+.+.+|+..+.++. ||||+++++++.
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~ 100 (337)
T 3ll6_A 23 VELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKE 100 (337)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTT
T ss_pred eeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhcccccccccc
Confidence 3445568999999999999999999875 6899999998543 3445677889999999996 999999999984
Q ss_pred ----eCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--ceecCCCCCCeeecCCC
Q 007107 479 ----EHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPS--VVHRNFKSANILLDDEL 552 (618)
Q Consensus 479 ----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--iiH~Dlkp~NiLl~~~~ 552 (618)
.....++||||++ |+|.++++... ....+++..++.++.|++.||+|||+. + |+||||||+|||++.++
T Consensus 101 ~~~~~~~~~~lv~e~~~-g~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~ 175 (337)
T 3ll6_A 101 ESDTGQAEFLLLTELCK-GQLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQG 175 (337)
T ss_dssp TSTTSSEEEEEEEECCS-EEHHHHHHHHH-TTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTS
T ss_pred ccccCCceEEEEEEecC-CCHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCC
Confidence 3345799999996 79999886432 245699999999999999999999998 7 99999999999999999
Q ss_pred CcEEeeccccccCCCCCccc-----------cccccccccccCcccc---ccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 553 NPHLSDCGLAALTPNTERQV-----------STQMVGAFGYSAPEFA---LSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 553 ~~kl~Dfgl~~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.+||+|||+++......... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||+
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~ 254 (337)
T 3ll6_A 176 TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE 254 (337)
T ss_dssp CEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-
T ss_pred CEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCc
Confidence 99999999998664332211 1134689999999998 56678999999999999999999999996
No 217
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2e-34 Score=291.34 Aligned_cols=199 Identities=21% Similarity=0.308 Sum_probs=170.3
Q ss_pred hhcCCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEE-eeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYC-AEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~l 485 (618)
..++|...+.||+|+||.||+|.. .+|+.||+|++..... .+.+.+|+++++.++|++++..+.++ ...+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 356899999999999999999987 5699999999865432 23578899999999998877776666 55677899
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeee---cCCCCcEEeecccc
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL---DDELNPHLSDCGLA 562 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl---~~~~~~kl~Dfgl~ 562 (618)
||||+ +++|.++++. ....+++..+..++.|++.||+|||++ +|+||||||+|||+ ++++.+||+|||++
T Consensus 83 v~e~~-~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 155 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEECC-CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEec-CCCHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCc
Confidence 99999 8899999963 245699999999999999999999999 99999999999999 48889999999999
Q ss_pred ccCCCCCcc------ccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 563 ALTPNTERQ------VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 216 (296)
T 3uzp_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 216 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTS
T ss_pred ccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence 766443221 1234579999999999999999999999999999999999999996
No 218
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.1e-35 Score=300.65 Aligned_cols=208 Identities=21% Similarity=0.328 Sum_probs=172.0
Q ss_pred ehhhhhhhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC
Q 007107 401 TVASLQTATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH 480 (618)
Q Consensus 401 ~~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 480 (618)
.....+...++|...+.||+|+||.||+|.+.+ .+|+|+++.........+.+.+|++++++++||||+++++++.+.
T Consensus 24 ~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 101 (319)
T 2y4i_B 24 FLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP 101 (319)
T ss_dssp CGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS
T ss_pred ccccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence 344555667889999999999999999998753 589999876544333445678899999999999999999999999
Q ss_pred CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecc
Q 007107 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (618)
Q Consensus 481 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfg 560 (618)
+..++||||+++++|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++ ++.+||+|||
T Consensus 102 ~~~~iv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg 174 (319)
T 2y4i_B 102 PHLAIITSLCKGRTLYSVVRD---AKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFG 174 (319)
T ss_dssp SCEEEECBCCCSEEHHHHTTS---SCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCS
T ss_pred CceEEEeecccCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecC
Confidence 999999999999999999963 345689999999999999999999999 999999999999998 6799999999
Q ss_pred ccccCCCCC----ccccccccccccccCcccccc---------CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTE----RQVSTQMVGAFGYSAPEFALS---------GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+++...... ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 244 (319)
T 2y4i_B 175 LFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK 244 (319)
T ss_dssp CCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSS
T ss_pred CccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 986543211 112233468999999999874 457889999999999999999999996
No 219
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=5.1e-35 Score=293.05 Aligned_cols=197 Identities=31% Similarity=0.504 Sum_probs=164.7
Q ss_pred hhhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC-CeEEE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH-GQRLL 485 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~~~~l 485 (618)
...++|...+.||+|+||.||+|... |+.||+|.++... ..+.+.+|++++++++||||+++++++... +..++
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~l 92 (278)
T 1byg_A 18 LNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92 (278)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEE
T ss_pred CChhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEE
Confidence 34578999999999999999999875 8899999997543 456788999999999999999999997654 47899
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+++++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 93 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~ 167 (278)
T 1byg_A 93 VTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 167 (278)
T ss_dssp EECCCTTEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC----
T ss_pred EEecCCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccc
Confidence 999999999999996321 22378899999999999999999999 9999999999999999999999999998755
Q ss_pred CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.... ....+++.|+|||.+.+..++.++||||||+++|||+| |+.||.
T Consensus 168 ~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 216 (278)
T 1byg_A 168 SSTQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP 216 (278)
T ss_dssp ------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCT
T ss_pred cccc----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCC
Confidence 4322 22357889999999999999999999999999999998 999986
No 220
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3.1e-34 Score=291.33 Aligned_cols=203 Identities=26% Similarity=0.342 Sum_probs=169.7
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCccccc--HHHHHHHHHHHHHhhcCCCCcccccceEEe--eCCeE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALS--LQEEDNFLEAVSNMSRLRHPNIVTLAGYCA--EHGQR 483 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~ 483 (618)
.++|...+.||+|+||.||+|... +++.||+|++...... ......+.+|++++++++||||+++++++. +.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999875 5889999999754321 234678999999999999999999999984 45578
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++||||++++ |.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 84 ~lv~e~~~~~-l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSV--PEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEECCSEE-HHHHHHHS--TTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEehhccCC-HHHHHHhC--cccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccc
Confidence 9999999876 77776532 245789999999999999999999999 99999999999999999999999999997
Q ss_pred cCCCCC-ccccccccccccccCccccccCC--ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 564 LTPNTE-RQVSTQMVGAFGYSAPEFALSGI--YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 564 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
...... ........||+.|+|||++.+.. ++.++||||||+++|||++|+.||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 214 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCC
Confidence 654321 22223457999999999997644 4789999999999999999999996
No 221
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.9e-34 Score=290.01 Aligned_cols=202 Identities=25% Similarity=0.378 Sum_probs=170.0
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.++|.....||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 21 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 98 (295)
T 2clq_A 21 YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFM 98 (295)
T ss_dssp BCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC--C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc--hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEE
Confidence 345666679999999999999875 58899999987543 334567899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC-CCCcEEeeccccccCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-ELNPHLSDCGLAALTP 566 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~-~~~~kl~Dfgl~~~~~ 566 (618)
||+++++|.++++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++....
T Consensus 99 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~ 174 (295)
T 2clq_A 99 EQVPGGSLSALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 174 (295)
T ss_dssp ECCSEEEHHHHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESC
T ss_pred EeCCCCCHHHHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccC
Confidence 9999999999997432 234567889999999999999999999 9999999999999987 8999999999997664
Q ss_pred CCCccccccccccccccCccccccCC--ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFALSGI--YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.... ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||.
T Consensus 175 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 226 (295)
T 2clq_A 175 GINP-CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY 226 (295)
T ss_dssp C------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTG
T ss_pred CCCC-cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCcc
Confidence 3222 223457899999999997654 7899999999999999999999984
No 222
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.4e-34 Score=291.23 Aligned_cols=201 Identities=27% Similarity=0.441 Sum_probs=175.0
Q ss_pred hhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
...++|...+.||+|+||.||+|... +++.||+|++..........+.+.+|++++++++||||+++++++...+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 34567999999999999999999876 68999999987655444456788999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC---CCcEEeecccc
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE---LNPHLSDCGLA 562 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~---~~~kl~Dfgl~ 562 (618)
||||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.+ +.+||+|||++
T Consensus 99 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 99 VGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 9999999999998863 34689999999999999999999999 99999999999999754 46999999999
Q ss_pred ccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 563 ALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
........ .....||+.|+|||.+.+. ++.++||||||+++|+|++|+.||.
T Consensus 172 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~ 223 (287)
T 2wei_A 172 TCFQQNTK--MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFY 223 (287)
T ss_dssp GTBCCCSS--CSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred eeecCCCc--cccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCC
Confidence 76643322 2334689999999988754 8999999999999999999999985
No 223
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.9e-34 Score=299.18 Aligned_cols=200 Identities=26% Similarity=0.408 Sum_probs=170.4
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC-----C
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH-----G 481 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 481 (618)
..++|...+.||+|+||.||+|.+. +|+.||||++.... .......+.+|++++++++||||+++++++... .
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD-KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc-cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 4568999999999999999999876 58999999996433 344566788999999999999999999988654 6
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccc
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGL 561 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl 561 (618)
..++||||++ ++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEeccC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 7899999997 589998862 4689999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCcc---------ccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 562 AALTPNTERQ---------VSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+......... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 224 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP 224 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCC
Confidence 9866432211 1123478999999998765 678999999999999999999999996
No 224
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.7e-34 Score=300.51 Aligned_cols=205 Identities=25% Similarity=0.372 Sum_probs=159.2
Q ss_pred hhhhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCe
Q 007107 404 SLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ 482 (618)
Q Consensus 404 ~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 482 (618)
......++|...+.||+|+||.||+|... +|+.||||++...... ...+.++++.+..++||||+++++++...+.
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF---RNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC---CCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc---cHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 34556788999999999999999999875 5899999988644322 2345667777888899999999999976443
Q ss_pred -------EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHh--hcCCCCceecCCCCCCeeecC-CC
Q 007107 483 -------RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH--EVCLPSVVHRNFKSANILLDD-EL 552 (618)
Q Consensus 483 -------~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--~~~~~~iiH~Dlkp~NiLl~~-~~ 552 (618)
.++||||+++ +|.+.+.........+++..+..++.|++.||+||| +. +|+||||||+|||++. ++
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~ 169 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADG 169 (360)
T ss_dssp SCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTT
T ss_pred ccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCC
Confidence 7899999986 555544433335667899999999999999999999 87 9999999999999996 89
Q ss_pred CcEEeeccccccCCCCCccccccccccccccCccccccCC-ccccchhhhHHHHHHHHHhCCCCCC
Q 007107 553 NPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGI-YTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 553 ~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.+||+|||+++....... .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||.
T Consensus 170 ~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~ 233 (360)
T 3e3p_A 170 TLKLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFR 233 (360)
T ss_dssp EEEECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cEEEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcC
Confidence 999999999987654332 23457899999999997654 8999999999999999999999996
No 225
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.9e-34 Score=293.39 Aligned_cols=199 Identities=26% Similarity=0.368 Sum_probs=164.0
Q ss_pred hhcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEe--------
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCA-------- 478 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-------- 478 (618)
..++|...+.||+|+||.||+|.... |+.||+|++... .....+.+.+|++++++++||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 86 (320)
T 2i6l_A 9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD 86 (320)
T ss_dssp ETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred cCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence 34679999999999999999998875 899999998644 3445678899999999999999999999874
Q ss_pred ------eCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeec-CC
Q 007107 479 ------EHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD-DE 551 (618)
Q Consensus 479 ------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~-~~ 551 (618)
+.+..++||||++ |+|.++++ .+.+++..+..++.|++.||+|||+. +|+||||||+||+++ ++
T Consensus 87 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 157 (320)
T 2i6l_A 87 DVGSLTELNSVYIVQEYME-TDLANVLE-----QGPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTED 157 (320)
T ss_dssp ----CCSCSEEEEEEECCS-EEHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTT
T ss_pred ccccccccCceeEEeeccC-CCHHHHhh-----cCCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCC
Confidence 3467899999998 69999885 35689999999999999999999999 999999999999997 56
Q ss_pred CCcEEeeccccccCCCCCc--cccccccccccccCcccccc-CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 552 LNPHLSDCGLAALTPNTER--QVSTQMVGAFGYSAPEFALS-GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 552 ~~~kl~Dfgl~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+.+||+|||+++....... .......+|..|+|||.+.+ ..++.++||||||+++|||++|+.||.
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 226 (320)
T 2i6l_A 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFA 226 (320)
T ss_dssp TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCC
Confidence 7999999999986643211 12233567999999998876 678999999999999999999999996
No 226
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=9.4e-35 Score=294.70 Aligned_cols=201 Identities=25% Similarity=0.433 Sum_probs=168.8
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
..++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC--HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 4567999999999999999999886 48899999987543 22356788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+++++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 95 ~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLE---LDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL 168 (302)
T ss_dssp EECCTTEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHH
T ss_pred EEeCCCCcHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccc
Confidence 999999999998863 235689999999999999999999999 99999999999999999999999999875321
Q ss_pred CCCccccccccccccccCccccc-----cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQVSTQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
.. ........||+.|+|||++. +..++.++||||||+++|||++|+.||.
T Consensus 169 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 223 (302)
T 2j7t_A 169 KT-LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHH 223 (302)
T ss_dssp HH-HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred cc-ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCc
Confidence 11 11122357899999999983 6678999999999999999999999986
No 227
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=296.60 Aligned_cols=202 Identities=26% Similarity=0.443 Sum_probs=173.6
Q ss_pred hhcCCcccceeccCccceEEEEEE-----cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCC-
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEF-----ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHG- 481 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~- 481 (618)
..++|...+.||+|+||.||+|.+ .+|+.||+|++... .....+.+.+|++++++++||||+++++++...+
T Consensus 39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 116 (326)
T 2w1i_A 39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 116 (326)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC---
T ss_pred CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCC
Confidence 345688899999999999999984 35899999998754 2345678999999999999999999999987654
Q ss_pred -eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecc
Q 007107 482 -QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (618)
Q Consensus 482 -~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfg 560 (618)
..++||||+++++|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg 190 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFG 190 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHH---STTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCT
T ss_pred CceEEEEECCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCc
Confidence 68999999999999999974 235689999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCccc--cccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 561 LAALTPNTERQV--STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++.......... .....++..|+|||.+.+..++.++||||||+++|||+||+.||.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~ 249 (326)
T 2w1i_A 191 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 249 (326)
T ss_dssp TCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGG
T ss_pred chhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCC
Confidence 998765443221 223457788999999999999999999999999999999998874
No 228
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.3e-34 Score=321.15 Aligned_cols=205 Identities=26% Similarity=0.392 Sum_probs=172.7
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEcC----CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeC
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFAN----GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEH 480 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 480 (618)
.+...++|...+.||+|+||.||+|.+.. +..||+|+++... .....+.+.+|+.++++++||||+++++++. +
T Consensus 385 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~ 462 (656)
T 2j0j_A 385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E 462 (656)
T ss_dssp TBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred cccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence 34456789999999999999999998753 5679999987543 3445678999999999999999999999985 4
Q ss_pred CeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecc
Q 007107 481 GQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (618)
Q Consensus 481 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfg 560 (618)
+..++||||+++|+|.++++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG 536 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQV---RKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFG 536 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHH---TTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred CceEEEEEcCCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecC
Confidence 578999999999999999963 234689999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 561 LAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 561 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
+++..............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 537 ~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~ 594 (656)
T 2j0j_A 537 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 594 (656)
T ss_dssp CCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred CCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCC
Confidence 998765443333344567889999999999999999999999999999997 999996
No 229
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=6.4e-35 Score=300.66 Aligned_cols=200 Identities=26% Similarity=0.400 Sum_probs=159.8
Q ss_pred hhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee-----CCe
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE-----HGQ 482 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~~ 482 (618)
..++|...+.||+|+||.||+|.. +++.||+|++.... ........|+..+..++||||+++++.+.. ...
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 346788999999999999999977 58999999986432 111222344444556899999999986543 235
Q ss_pred EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC------CCCceecCCCCCCeeecCCCCcEE
Q 007107 483 RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC------LPSVVHRNFKSANILLDDELNPHL 556 (618)
Q Consensus 483 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~~~iiH~Dlkp~NiLl~~~~~~kl 556 (618)
.++||||+++|+|.++++. ...++..+..++.|++.||+|||+.. .++|+||||||+|||++.++.+||
T Consensus 87 ~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSL-----HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHhh-----cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEE
Confidence 7899999999999999963 34588999999999999999999862 238999999999999999999999
Q ss_pred eeccccccCCCCC-------ccccccccccccccCcccccc-------CCccccchhhhHHHHHHHHHhCCCCC
Q 007107 557 SDCGLAALTPNTE-------RQVSTQMVGAFGYSAPEFALS-------GIYTVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 557 ~Dfgl~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlG~il~elltg~~Pf 616 (618)
+|||+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~ 235 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDL 235 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGG
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcC
Confidence 9999997654321 122234579999999999987 45778999999999999999997775
No 230
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=5e-34 Score=293.97 Aligned_cols=198 Identities=21% Similarity=0.334 Sum_probs=170.8
Q ss_pred hhhcCCcccceeccCccceEEEEEE--cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCC------cccccceEEe
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEF--ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHP------NIVTLAGYCA 478 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~--~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~------niv~l~~~~~ 478 (618)
...++|+..+.||+|+||.||+|.. .+++.||+|+++.. ....+.+.+|+++++.++|+ +++++++++.
T Consensus 11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~ 87 (339)
T 1z57_A 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE 87 (339)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE
T ss_pred CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc
Confidence 4457899999999999999999986 35889999999743 23456677888888777655 5999999999
Q ss_pred eCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC--------
Q 007107 479 EHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-------- 550 (618)
Q Consensus 479 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~-------- 550 (618)
..+..++||||+ +++|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||++.
T Consensus 88 ~~~~~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~ 161 (339)
T 1z57_A 88 HHGHICIVFELL-GLSTYDFIKEN--GFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYN 161 (339)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC
T ss_pred cCCcEEEEEcCC-CCCHHHHHHhc--CCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccC
Confidence 999999999999 78999988632 234688999999999999999999999 9999999999999987
Q ss_pred -----------CCCcEEeeccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 551 -----------ELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 551 -----------~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 162 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 235 (339)
T 1z57_A 162 PKIKRDERTLINPDIKVVDFGSATYDDEHH----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFP 235 (339)
T ss_dssp ----CEEEEESCCCEEECCCSSCEETTSCC----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred CccccccccccCCCceEeeCcccccCcccc----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence 6689999999997654322 24578999999999999999999999999999999999999995
No 231
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.9e-34 Score=302.61 Aligned_cols=200 Identities=20% Similarity=0.300 Sum_probs=168.5
Q ss_pred hhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC--------CCcccccceE
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR--------HPNIVTLAGY 476 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~ 476 (618)
....++|...+.||+|+||.||+|... +++.||+|+++.. ....+.+.+|+++++.++ |+||++++++
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~ 109 (397)
T 1wak_A 33 DLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDD 109 (397)
T ss_dssp CEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEE
T ss_pred hhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecc
Confidence 334578999999999999999999765 5889999999743 334567888999888885 7889999999
Q ss_pred Ee----eCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCC
Q 007107 477 CA----EHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL 552 (618)
Q Consensus 477 ~~----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~ 552 (618)
+. .....++||||+. +++.+.+... ....+++..+..++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 110 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~ 184 (397)
T 1wak_A 110 FKISGVNGTHICMVFEVLG-HHLLKWIIKS--NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNE 184 (397)
T ss_dssp EEEEETTEEEEEEEECCCC-CBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCH
T ss_pred eeecCCCCceEEEEEeccC-ccHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccc
Confidence 87 4557899999994 5666655422 2356899999999999999999999963 799999999999999775
Q ss_pred -------------------------------------------------CcEEeeccccccCCCCCcccccccccccccc
Q 007107 553 -------------------------------------------------NPHLSDCGLAALTPNTERQVSTQMVGAFGYS 583 (618)
Q Consensus 553 -------------------------------------------------~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~ 583 (618)
.+||+|||+++..... .....||+.|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~ 260 (397)
T 1wak_A 185 QYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYR 260 (397)
T ss_dssp HHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGC
T ss_pred hhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCccc
Confidence 7999999999766432 23457899999
Q ss_pred CccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 584 APEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 584 aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|||++.+..++.++|||||||++|||+||+.||+
T Consensus 261 aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~ 294 (397)
T 1wak_A 261 SLEVLIGSGYNTPADIWSTACMAFELATGDYLFE 294 (397)
T ss_dssp CHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred CChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCC
Confidence 9999999999999999999999999999999996
No 232
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.7e-34 Score=291.03 Aligned_cols=202 Identities=27% Similarity=0.425 Sum_probs=163.2
Q ss_pred hcCCcccceeccCccceEEEEEEc--CCc--EEEEEEcCcccc-cHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA--NGK--IMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQR 483 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~--~g~--~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 483 (618)
.++|+..+.||+|+||.||+|.+. +++ .||+|+++.... .....+.+.+|++++++++||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 467889999999999999999764 233 689999875432 2345678899999999999999999999998765 8
Q ss_pred EEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 484 LLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 484 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
++||||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 96 ~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp EEEEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eeeEecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccc
Confidence 8999999999999998642 34689999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCcc--ccccccccccccCccccccCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 564 LTPNTERQ--VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 564 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
........ ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~ 226 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI 226 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 76543322 2233467889999999999999999999999999999999 999995
No 233
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=5.2e-34 Score=292.75 Aligned_cols=204 Identities=28% Similarity=0.418 Sum_probs=152.2
Q ss_pred hhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHH-HhhcCCCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVS-NMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
..++|...+.||+|+||.||+|... +|+.||+|++...... ....++..|+. +++.++||||+++++++...+..++
T Consensus 20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l 98 (327)
T 3aln_A 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDE-KEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI 98 (327)
T ss_dssp CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCH-HHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCc-hHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence 4567889999999999999999875 6899999999765432 33444555555 7788899999999999999999999
Q ss_pred EEEecCCCChhhhhhcc-cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 486 VYEYVGNGNLHDMLHFA-DDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
||||+++ +|.+++... ......+++..+..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||+++.
T Consensus 99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 9999985 887777532 123567899999999999999999999862 799999999999999999999999999976
Q ss_pred CCCCCccccccccccccccCcccc----ccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFA----LSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..... ......||+.|+|||++ .+..++.++||||||+++|||++|+.||.
T Consensus 176 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 230 (327)
T 3aln_A 176 LVDSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYP 230 (327)
T ss_dssp --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSS
T ss_pred ccccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 64322 22234799999999999 45678999999999999999999999995
No 234
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=7.6e-34 Score=305.05 Aligned_cols=199 Identities=23% Similarity=0.331 Sum_probs=168.8
Q ss_pred hhcCCcccceeccCccceEEEEEE-cCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCC-cccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEF-ANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHP-NIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~l 485 (618)
..++|...+.||+|+||.||+|.+ .+++.||||++..... ..++..|+++++.++|+ ++..+..++...+..++
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 346899999999999999999986 4689999998764432 23477889999999875 45555666677788999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeee---cCCCCcEEeecccc
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL---DDELNPHLSDCGLA 562 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl---~~~~~~kl~Dfgl~ 562 (618)
||||+ +++|.++++.. ...+++..++.++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||++
T Consensus 81 vme~~-g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla 153 (483)
T 3sv0_A 81 VMDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153 (483)
T ss_dssp EEECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEECC-CCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcc
Confidence 99999 88999999742 45799999999999999999999999 99999999999999 58899999999999
Q ss_pred ccCCCCCcc------ccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 563 ALTPNTERQ------VSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 563 ~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~ 214 (483)
T 3sv0_A 154 KKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 214 (483)
T ss_dssp EECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTS
T ss_pred eeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCc
Confidence 866443221 1225679999999999999999999999999999999999999996
No 235
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=8.4e-34 Score=297.66 Aligned_cols=206 Identities=25% Similarity=0.304 Sum_probs=171.5
Q ss_pred ehhhhhhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-CC-----ccccc
Q 007107 401 TVASLQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HP-----NIVTL 473 (618)
Q Consensus 401 ~~~~~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l 473 (618)
.+...+...++|...+.||+|+||.||+|... +++.||||+++... .....+..|+.+++.++ |+ +|+++
T Consensus 45 ~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~ 121 (382)
T 2vx3_A 45 IVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK---AFLNQAQIEVRLLELMNKHDTEMKYYIVHL 121 (382)
T ss_dssp CCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH---HHHHHHHHHHHHHHHHHHCSSGGGGGBCCE
T ss_pred EeecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH---HHHHHHHHHHHHHHHHHhcccccceeEEEe
Confidence 33444556789999999999999999999876 58899999997432 33455667777777664 44 49999
Q ss_pred ceEEeeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeec--CC
Q 007107 474 AGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD--DE 551 (618)
Q Consensus 474 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~--~~ 551 (618)
++++...+..++||||++ ++|.+++... ....+++..+..++.|++.||+|||+.. .+|+||||||+|||++ .+
T Consensus 122 ~~~~~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~~-~~ivHrDlkp~NIll~~~~~ 197 (382)
T 2vx3_A 122 KRHFMFRNHLCLVFEMLS-YNLYDLLRNT--NFRGVSLNLTRKFAQQMCTALLFLATPE-LSIIHCDLKPENILLCNPKR 197 (382)
T ss_dssp EEEEEETTEEEEEEECCC-CBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHTSTT-TCEECCCCSGGGEEESSTTS
T ss_pred eeeeccCCceEEEEecCC-CCHHHHHhhc--CcCCCCHHHHHHHHHHHHHHHHHhccCC-CCEEcCCCCcccEEEecCCC
Confidence 999999999999999996 5999998743 2346899999999999999999999521 2899999999999995 47
Q ss_pred CCcEEeeccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 552 LNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 552 ~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||.
T Consensus 198 ~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~ 259 (382)
T 2vx3_A 198 SAIKIVDFGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS 259 (382)
T ss_dssp CCEEECCCTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CcEEEEeccCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 78999999999876432 234578999999999999999999999999999999999999996
No 236
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.4e-34 Score=296.14 Aligned_cols=203 Identities=22% Similarity=0.341 Sum_probs=172.2
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccH----HHHHHHHHHHHHhhcCC--CCcccccceEE
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL----QEEDNFLEAVSNMSRLR--HPNIVTLAGYC 477 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~--h~niv~l~~~~ 477 (618)
.+...++|...+.||+|+||.||+|... +++.||+|++....... .....+.+|++++++++ ||||+++++++
T Consensus 38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~ 117 (320)
T 3a99_A 38 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 117 (320)
T ss_dssp --CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE
T ss_pred cCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE
Confidence 3445678999999999999999999764 68999999987543221 12245667888888885 59999999999
Q ss_pred eeCCeEEEEEEecCC-CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeec-CCCCcE
Q 007107 478 AEHGQRLLVYEYVGN-GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD-DELNPH 555 (618)
Q Consensus 478 ~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~-~~~~~k 555 (618)
...+..++|+|++.+ ++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++ +++.+|
T Consensus 118 ~~~~~~~lv~e~~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~k 190 (320)
T 3a99_A 118 ERPDSFVLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELK 190 (320)
T ss_dssp ECSSEEEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEE
T ss_pred ecCCcEEEEEEcCCCCccHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEE
Confidence 999999999999986 899999863 35689999999999999999999999 999999999999999 789999
Q ss_pred EeeccccccCCCCCccccccccccccccCccccccCCc-cccchhhhHHHHHHHHHhCCCCCC
Q 007107 556 LSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 556 l~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|+|||+++...... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||+
T Consensus 191 L~Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 250 (320)
T 3a99_A 191 LIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 250 (320)
T ss_dssp ECCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred EeeCcccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCC
Confidence 99999998765322 234579999999999987776 788999999999999999999996
No 237
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3.3e-34 Score=305.54 Aligned_cols=199 Identities=25% Similarity=0.331 Sum_probs=156.1
Q ss_pred cCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEEEEE
Q 007107 410 NSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 410 ~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 488 (618)
+.|...+.||+|+||+||.+...+|+.||||++.... .+.+.+|+++++++ +||||+++++++.+.+..++|||
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~-----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E 89 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF-----CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE 89 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH-----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEe
Confidence 3456678899999999987777789999999986432 34567899998875 89999999999999999999999
Q ss_pred ecCCCChhhhhhcccCCCCC---CCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCC-------------C
Q 007107 489 YVGNGNLHDMLHFADDSSKN---LTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDE-------------L 552 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~---l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~-------------~ 552 (618)
|++ |+|.+++......... ..+..++.++.||+.||+|||+. +|+||||||+|||++.+ +
T Consensus 90 ~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~ 165 (434)
T 2rio_A 90 LCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENL 165 (434)
T ss_dssp CCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSC
T ss_pred cCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCce
Confidence 996 6999999743222111 13334678999999999999999 99999999999999754 4
Q ss_pred CcEEeeccccccCCCCCcc---ccccccccccccCcccccc-------CCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 553 NPHLSDCGLAALTPNTERQ---VSTQMVGAFGYSAPEFALS-------GIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 553 ~~kl~Dfgl~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
.+||+|||++......... ......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||.
T Consensus 166 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~ 241 (434)
T 2rio_A 166 RILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241 (434)
T ss_dssp EEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred EEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCC
Confidence 8999999999876543322 1234579999999999976 668999999999999999999 999996
No 238
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.3e-33 Score=286.07 Aligned_cols=194 Identities=27% Similarity=0.446 Sum_probs=161.7
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee--------
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE-------- 479 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------- 479 (618)
.++|+..+.||+|+||.||+|... +|+.||+|++... ....+.+.+|++++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT---EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM 81 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc---HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence 467889999999999999999875 6899999998642 3456778999999999999999999998865
Q ss_pred -----CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCc
Q 007107 480 -----HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNP 554 (618)
Q Consensus 480 -----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~ 554 (618)
.+..++||||+++|+|.++++. ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~ 155 (303)
T 1zy4_A 82 TAVKKKSTLFIQMEYCENGTLYDLIHS---ENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNV 155 (303)
T ss_dssp ----CEEEEEEEEECCCSCBHHHHHHH---SCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCE
T ss_pred cccccCCceEEEEecCCCCCHHHhhhc---cccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCE
Confidence 3567999999999999999973 234678899999999999999999999 99999999999999999999
Q ss_pred EEeeccccccCCCCC-------------ccccccccccccccCccccccC-CccccchhhhHHHHHHHHHh
Q 007107 555 HLSDCGLAALTPNTE-------------RQVSTQMVGAFGYSAPEFALSG-IYTVKSDVYSFGVVMLELLT 611 (618)
Q Consensus 555 kl~Dfgl~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlG~il~ellt 611 (618)
||+|||++....... ........||+.|+|||++.+. .++.++|||||||++|||++
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~ 226 (303)
T 1zy4_A 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY 226 (303)
T ss_dssp EECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS
T ss_pred EEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh
Confidence 999999997654221 1122345799999999999864 68999999999999999998
No 239
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=289.28 Aligned_cols=204 Identities=24% Similarity=0.381 Sum_probs=155.4
Q ss_pred hhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEE
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRL 484 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 484 (618)
....++|...+.||+|+||.||+|... +|+.||+|++..........+.+.++..+++.++||||+++++++...+..+
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 100 (318)
T 2dyl_A 21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVF 100 (318)
T ss_dssp ECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred hhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEE
Confidence 334578899999999999999999886 6899999999765544444455566666788889999999999999999999
Q ss_pred EEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 485 LVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 485 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
+||||+ ++.+..+... ....+++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||++..
T Consensus 101 lv~e~~-~~~~~~l~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~ 174 (318)
T 2dyl_A 101 IAMELM-GTCAEKLKKR---MQGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFGISGR 174 (318)
T ss_dssp EEECCC-SEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCGGGEEECTTSCEEECCCTTC--
T ss_pred EEEecc-CCcHHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHhhC--CEEeCCCCHHHEEECCCCCEEEEECCCchh
Confidence 999999 4455555432 2457899999999999999999999832 899999999999999999999999999976
Q ss_pred CCCCCccccccccccccccCccccc-----cCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 565 TPNTERQVSTQMVGAFGYSAPEFAL-----SGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 565 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..... ......||+.|+|||++. ...++.++||||||+++|||++|+.||+
T Consensus 175 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 230 (318)
T 2dyl_A 175 LVDDK--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYK 230 (318)
T ss_dssp --------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred ccCCc--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCC
Confidence 54322 223457999999999994 4568899999999999999999999996
No 240
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.3e-33 Score=290.88 Aligned_cols=196 Identities=22% Similarity=0.338 Sum_probs=145.9
Q ss_pred hhcCCccc-ceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee----CC
Q 007107 408 ATNSFSQE-FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE----HG 481 (618)
Q Consensus 408 ~~~~~~~~-~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~ 481 (618)
..++|... +.||+|+||.||+|... +|+.||+|++.... .... +....++.++||||+++++++.. ..
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~---e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 99 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP---KARQ---EVDHHWQASGGPHIVCILDVYENMHHGKR 99 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH---HHHH---HHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH---HHHH---HHHHHHHhcCCCChHHHHHHHhhccCCCc
Confidence 45678874 46999999999999876 58999999986432 1222 22333556789999999999876 44
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC---CCCcEEee
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---ELNPHLSD 558 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~---~~~~kl~D 558 (618)
..++||||+++|+|.+++... ....+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~D 174 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQER--GDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTD 174 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred eEEEEEeccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEec
Confidence 589999999999999999732 235799999999999999999999999 9999999999999986 45599999
Q ss_pred ccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 559 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
||+++..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 175 fg~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 230 (336)
T 3fhr_A 175 FGFAKETTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFY 230 (336)
T ss_dssp CTTCEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-
T ss_pred cccceecccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 9999765432 2234578999999999999999999999999999999999999995
No 241
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-34 Score=293.14 Aligned_cols=202 Identities=23% Similarity=0.341 Sum_probs=163.5
Q ss_pred hhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccH----HHHHHHHHHHHHhhcC----CCCcccccceE
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSL----QEEDNFLEAVSNMSRL----RHPNIVTLAGY 476 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l----~h~niv~l~~~ 476 (618)
+...++|...+.||+|+||.||+|... +++.||+|++....... .....+.+|+..+.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 445678999999999999999999774 58899999997543321 1233456788888877 89999999999
Q ss_pred EeeCCeEEEEEEe-cCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeec-CCCCc
Q 007107 477 CAEHGQRLLVYEY-VGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD-DELNP 554 (618)
Q Consensus 477 ~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~-~~~~~ 554 (618)
+...+..++|+|| +.+++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+||+++ +++.+
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITE----KGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeE
Confidence 9999999999999 789999999973 34689999999999999999999999 999999999999999 88999
Q ss_pred EEeeccccccCCCCCccccccccccccccCccccccCCc-cccchhhhHHHHHHHHHhCCCCCC
Q 007107 555 HLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIY-TVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 555 kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
||+|||++....... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||+
T Consensus 180 kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 240 (312)
T 2iwi_A 180 KLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE 240 (312)
T ss_dssp EECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCC
Confidence 999999998765432 234568999999999987776 458999999999999999999996
No 242
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.3e-33 Score=291.09 Aligned_cols=200 Identities=21% Similarity=0.321 Sum_probs=169.9
Q ss_pred hhhhhcCCcccceeccCccceEEEEEEc-CC-cEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCc------ccccceE
Q 007107 405 LQTATNSFSQEFLIGEGSLGRVYRAEFA-NG-KIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN------IVTLAGY 476 (618)
Q Consensus 405 ~~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g-~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~ 476 (618)
.....++|...+.||+|+||.||+|... ++ +.||+|+++.. ....+.+.+|++++++++|++ ++.++++
T Consensus 14 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 90 (355)
T 2eu9_A 14 GDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV---GKYREAARLEINVLKKIKEKDKENKFLCVLMSDW 90 (355)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEE
T ss_pred CceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc---ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeee
Confidence 3445678999999999999999999875 34 68999999743 234567788888888887655 8999999
Q ss_pred EeeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeee--------
Q 007107 477 CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILL-------- 548 (618)
Q Consensus 477 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl-------- 548 (618)
+...+..++||||+ ++++.+++... ....+++..+..++.||+.||+|||+. +|+||||||+|||+
T Consensus 91 ~~~~~~~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~ 164 (355)
T 2eu9_A 91 FNFHGHMCIAFELL-GKNTFEFLKEN--NFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETL 164 (355)
T ss_dssp EEETTEEEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEE
T ss_pred eeeCCeEEEEEecc-CCChHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccc
Confidence 99999999999999 56777766532 235689999999999999999999999 99999999999999
Q ss_pred -----------cCCCCcEEeeccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 549 -----------DDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 549 -----------~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
+.++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 165 ~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 240 (355)
T 2eu9_A 165 YNEHKSCEEKSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 240 (355)
T ss_dssp ECCC-CCCEEEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred ccccccccccccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCC
Confidence 567899999999997654322 34579999999999999999999999999999999999999996
No 243
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.7e-33 Score=317.02 Aligned_cols=194 Identities=24% Similarity=0.394 Sum_probs=167.7
Q ss_pred hhhcCCcccceeccCccceEEEEEEc--CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEeeCCe--
Q 007107 407 TATNSFSQEFLIGEGSLGRVYRAEFA--NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQ-- 482 (618)
Q Consensus 407 ~~~~~~~~~~~Lg~G~~g~Vy~~~~~--~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-- 482 (618)
...++|...+.||+|+||.||+|.+. +|+.||||++.... .......+.+|++++++++||||+++++++...+.
T Consensus 77 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 155 (681)
T 2pzi_A 77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG-DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHG 155 (681)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTS
T ss_pred EeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC-CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCC
Confidence 34578999999999999999999875 58999999987543 34456778999999999999999999999987665
Q ss_pred ---EEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeec
Q 007107 483 ---RLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDC 559 (618)
Q Consensus 483 ---~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Df 559 (618)
.++||||+++++|.+++. ..+++..++.++.||+.||+|||++ +|+||||||+|||++++ .+||+||
T Consensus 156 ~~~~~lv~E~~~g~~L~~~~~------~~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DF 225 (681)
T 2pzi_A 156 DPVGYIVMEYVGGQSLKRSKG------QKLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDL 225 (681)
T ss_dssp CEEEEEEEECCCCEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCC
T ss_pred CceeEEEEEeCCCCcHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEec
Confidence 799999999999988764 2689999999999999999999999 99999999999999986 8999999
Q ss_pred cccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 560 GLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 560 gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|+++..... ....||+.|+|||++.+.. +.++|||||||++|||++|..||.
T Consensus 226 G~a~~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~ 277 (681)
T 2pzi_A 226 GAVSRINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRN 277 (681)
T ss_dssp TTCEETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEET
T ss_pred ccchhcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCc
Confidence 999876433 3457999999999987654 889999999999999999999875
No 244
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.2e-34 Score=298.80 Aligned_cols=193 Identities=16% Similarity=0.154 Sum_probs=157.1
Q ss_pred hcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccc------cHHHHHHHHHHHHHhhcCC---------CCccccc
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAAL------SLQEEDNFLEAVSNMSRLR---------HPNIVTL 473 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l~---------h~niv~l 473 (618)
.++|...+.||+|+||.||+|+. +|+.||||++..... .....+.+.+|+++++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46788899999999999999988 689999999975432 1122356777777777665 5555555
Q ss_pred ce-----------------EEee-------------CCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHH
Q 007107 474 AG-----------------YCAE-------------HGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTAR 523 (618)
Q Consensus 474 ~~-----------------~~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~ 523 (618)
.+ ++.+ .+..++||||+++|++.+.+. ...+++..+..++.||+.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~-----~~~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR-----TKLSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT-----TTCCCHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH-----hcCCCHHHHHHHHHHHHH
Confidence 44 4443 678999999999997766663 256899999999999999
Q ss_pred HHHHHh-hcCCCCceecCCCCCCeeecCCC--------------------CcEEeeccccccCCCCCccccccccccccc
Q 007107 524 ALEYLH-EVCLPSVVHRNFKSANILLDDEL--------------------NPHLSDCGLAALTPNTERQVSTQMVGAFGY 582 (618)
Q Consensus 524 ~L~~LH-~~~~~~iiH~Dlkp~NiLl~~~~--------------------~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y 582 (618)
||+||| +. +|+||||||+|||++.++ .+||+|||+++..... ..+||+.|
T Consensus 173 aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y 243 (336)
T 2vuw_A 173 SLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVS 243 (336)
T ss_dssp HHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCT
T ss_pred HHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecc
Confidence 999999 88 999999999999999887 8999999999865432 34799999
Q ss_pred cCccccccCCccccchhhhHHHH-HHHHHhCCCCCC
Q 007107 583 SAPEFALSGIYTVKSDVYSFGVV-MLELLTGRKPLD 617 (618)
Q Consensus 583 ~aPE~~~~~~~~~~~DvwSlG~i-l~elltg~~Pf~ 617 (618)
+|||++.+.. +.++||||+|++ .+++++|..||.
T Consensus 244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred cChhhhcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence 9999998766 889999998776 778999999984
No 245
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=298.66 Aligned_cols=198 Identities=22% Similarity=0.313 Sum_probs=158.0
Q ss_pred hhcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 486 (618)
...+|...+.||+|+||+||.....+|+.||||++...... .+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~-----~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv 96 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS-----FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA 96 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE-----ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH-----HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence 34568889999999999976666667999999998654322 245788999888 799999999999999999999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC-----CCCcEEeeccc
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD-----ELNPHLSDCGL 561 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~-----~~~~kl~Dfgl 561 (618)
|||++ |+|.+++... .....+..+..++.||+.||+|||+. +|+||||||+|||++. ...+||+|||+
T Consensus 97 ~E~~~-g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~ 169 (432)
T 3p23_A 97 IELCA-ATLQEYVEQK---DFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGL 169 (432)
T ss_dssp EECCS-EEHHHHHHSS---SCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTE
T ss_pred EECCC-CCHHHHHHhc---CCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccc
Confidence 99996 5999998632 23344455678999999999999999 9999999999999953 23578999999
Q ss_pred cccCCCCCc--cccccccccccccCccccc---cCCccccchhhhHHHHHHHHHh-CCCCCC
Q 007107 562 AALTPNTER--QVSTQMVGAFGYSAPEFAL---SGIYTVKSDVYSFGVVMLELLT-GRKPLD 617 (618)
Q Consensus 562 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 617 (618)
++....... .......||+.|+|||++. ...++.++|||||||++|||++ |+.||.
T Consensus 170 a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~ 231 (432)
T 3p23_A 170 CKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFG 231 (432)
T ss_dssp EECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTB
T ss_pred eeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcc
Confidence 987653322 2234467999999999997 4567889999999999999999 999985
No 246
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.4e-33 Score=293.22 Aligned_cols=197 Identities=19% Similarity=0.335 Sum_probs=167.4
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-----------CCcccccceE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-----------HPNIVTLAGY 476 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~ 476 (618)
..+|...+.||+|+||.||+|... +++.||+|++... ......+.+|++++++++ ||||++++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC---ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 467999999999999999999874 6899999999743 234566778888888775 8999999999
Q ss_pred EeeCC----eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeec---
Q 007107 477 CAEHG----QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLD--- 549 (618)
Q Consensus 477 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~--- 549 (618)
+...+ ..++||||+ +++|.+++... ....+++..+..++.||+.||+|||+++ +|+||||||+|||++
T Consensus 95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 95 FNHKGPNGVHVVMVFEVL-GENLLALIKKY--EHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVD 169 (373)
T ss_dssp EEEEETTEEEEEEEECCC-CEEHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEE
T ss_pred hhccCCCCceEEEEEecC-CCCHHHHHHHh--hccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccC
Confidence 88654 789999999 88999998743 2345899999999999999999999953 899999999999994
Q ss_pred ---CCCCcEEeeccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 550 ---DELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 550 ---~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
..+.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||+||+.||+
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 236 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE 236 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC-
T ss_pred CCcCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 4447999999999766432 223578999999999999999999999999999999999999996
No 247
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.6e-33 Score=283.62 Aligned_cols=220 Identities=26% Similarity=0.443 Sum_probs=200.2
Q ss_pred CCChHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCceeEeeC----CCEEEEEcCCCCCcc--cccccccCCCCCCE
Q 007107 38 TTDSSDVQALQVLYTSLNSPSVLTNWKGNEGDPCGESWKGVACEG----SAVVSIDISGLGLSG--TMGYLLSDLLSLRK 111 (618)
Q Consensus 38 ~~~~~~~~al~~~~~~~~~~~~~~~w~~~~~~~c~~~w~gv~c~~----~~v~~l~l~~~~l~~--~~~~~l~~l~~L~~ 111 (618)
.|.++|++||++||+++.++..+.+|.. +.+||.+.|.||.|+. .+|+.|+|++|++.| .+|..|.++++|++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~ 80 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNF 80 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSE
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCe
Confidence 4678999999999999988878999975 4577855699999985 689999999999999 99999999999999
Q ss_pred EeecC-CCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCc
Q 007107 112 FDLSG-NSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNN 188 (618)
Q Consensus 112 L~L~~-N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 188 (618)
|+|++ |.+.+.+|..+. ++|++|+|++|++++.+|..+.++++|++|+|++|++++.+|..|..+++|++|+|++|+
T Consensus 81 L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 160 (313)
T 1ogq_A 81 LYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160 (313)
T ss_dssp EEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred eeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCc
Confidence 99995 999999998876 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccCC-CcCeeeeccccccccccc-cCCCCccEEEcccccccccCchhh---hcccchhccCCcCCC
Q 007107 189 FSGDLPNSFISLS-NISSLYLQNNQVTGSLNV-FSGLPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDN 258 (618)
Q Consensus 189 l~g~~p~~~~~l~-~L~~L~l~~N~l~~~~~~-~~~~~L~~L~l~~N~l~g~ip~~~---~~l~~l~~~~N~~~~ 258 (618)
++|.+|..+..++ +|++|+|++|++++.++. +...+|+.|+|++|++++.+|..+ .+|+.|++++|.+..
T Consensus 161 l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 235 (313)
T 1ogq_A 161 ISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235 (313)
T ss_dssp CEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECC
T ss_pred ccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceee
Confidence 9999999999998 999999999999986654 444569999999999999988765 567788999998863
No 248
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.8e-33 Score=308.62 Aligned_cols=202 Identities=28% Similarity=0.440 Sum_probs=173.2
Q ss_pred hcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee------CC
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE------HG 481 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~ 481 (618)
.++|...+.||+|+||.||+|.+. +|+.||+|++.... .....+.+.+|++++++++||||+++++++.. .+
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL-SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC-CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 367999999999999999999875 58999999987543 45566789999999999999999999998765 66
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCC---cEEee
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELN---PHLSD 558 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~---~kl~D 558 (618)
..++||||+++|+|.++++... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+|
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~-~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~D 167 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIID 167 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSS-CTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred eEEEEEEeCCCCCHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcc
Confidence 7899999999999999997432 234688999999999999999999999 9999999999999997765 89999
Q ss_pred ccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 559 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
||++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 168 FG~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~ 224 (676)
T 3qa8_A 168 LGYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFL 224 (676)
T ss_dssp CCCCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence 99998765432 2234679999999999999999999999999999999999999994
No 249
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.98 E-value=3.2e-32 Score=273.67 Aligned_cols=173 Identities=16% Similarity=0.174 Sum_probs=152.2
Q ss_pred hhcCCcccceeccCccceEEEEEEcC-CcEEEEEEcCccccc-HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEE
Q 007107 408 ATNSFSQEFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALS-LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 408 ~~~~~~~~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 485 (618)
..++|...+.||+|+||.||+|.... |+.||+|++...... ....+.+.+|++.+.+++||||+++++++...+..++
T Consensus 29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 108 (286)
T 3uqc_A 29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLV 108 (286)
T ss_dssp TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEE
Confidence 44679999999999999999998864 899999999865433 4455788999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 486 VYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 486 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
||||+++++|.++++. + ....++.+++.|++.||+|||++ +|+||||||+|||+++++.+||+++|
T Consensus 109 v~e~~~g~~L~~~l~~-----~-~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~----- 174 (286)
T 3uqc_A 109 VAEWIRGGSLQEVADT-----S-PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA----- 174 (286)
T ss_dssp EEECCCEEEHHHHHTT-----C-CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-----
T ss_pred EEEecCCCCHHHHHhc-----C-CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-----
Confidence 9999999999999852 2 35567889999999999999999 99999999999999999999998443
Q ss_pred CCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 566 PNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 566 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
|++| ++.++|||||||++|||+||+.||.
T Consensus 175 ----------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~ 203 (286)
T 3uqc_A 175 ----------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLP 203 (286)
T ss_dssp ----------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSC
T ss_pred ----------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCC
Confidence 3333 6889999999999999999999996
No 250
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.97 E-value=5.1e-33 Score=294.42 Aligned_cols=203 Identities=18% Similarity=0.240 Sum_probs=156.3
Q ss_pred hhhhcCCcccceeccCccceEEEEEEc-CCcEEEEEEcCccc-ccHHHHHHHHHHHHHhhcCCC-Ccccccc--------
Q 007107 406 QTATNSFSQEFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAA-LSLQEEDNFLEAVSNMSRLRH-PNIVTLA-------- 474 (618)
Q Consensus 406 ~~~~~~~~~~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h-~niv~l~-------- 474 (618)
......|...+.||+|+||.||+|.+. +|+.||||++.... ......+.+.+|+.+++.++| +|.....
T Consensus 74 ~~~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~ 153 (413)
T 3dzo_A 74 GERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFP 153 (413)
T ss_dssp SSCCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCC
T ss_pred CCCceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccc
Confidence 344556888889999999999999865 69999999987332 222335678999999999987 3221111
Q ss_pred -eE------------Eee-----CCeEEEEEEecCCCChhhhhhcc---cCCCCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 007107 475 -GY------------CAE-----HGQRLLVYEYVGNGNLHDMLHFA---DDSSKNLTWNARVRVALGTARALEYLHEVCL 533 (618)
Q Consensus 475 -~~------------~~~-----~~~~~lv~e~~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~ 533 (618)
+. +.. ....+++|+++ +++|.++++.. ......+++..+..++.|+++||+|||++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-- 230 (413)
T 3dzo_A 154 FDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY-- 230 (413)
T ss_dssp CEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred hhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 11 111 12356677755 67999988532 22345578889999999999999999999
Q ss_pred CCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccccccccccccccCcccc----------ccCCccccchhhhHH
Q 007107 534 PSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFA----------LSGIYTVKSDVYSFG 603 (618)
Q Consensus 534 ~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DvwSlG 603 (618)
+|+||||||+|||++.++.+||+|||+++..... ....+| +.|+|||++ .+..++.++||||||
T Consensus 231 -~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlG 304 (413)
T 3dzo_A 231 -GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLG 304 (413)
T ss_dssp -TEECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHH
T ss_pred -CcccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHH
Confidence 9999999999999999999999999998765432 334577 999999999 556688999999999
Q ss_pred HHHHHHHhCCCCCC
Q 007107 604 VVMLELLTGRKPLD 617 (618)
Q Consensus 604 ~il~elltg~~Pf~ 617 (618)
|++|||++|+.||.
T Consensus 305 vil~elltg~~Pf~ 318 (413)
T 3dzo_A 305 LAIYWIWCADLPNT 318 (413)
T ss_dssp HHHHHHHHSSCCCC
T ss_pred HHHHHHHHCCCCCC
Confidence 99999999999996
No 251
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.97 E-value=9.1e-31 Score=265.04 Aligned_cols=174 Identities=23% Similarity=0.367 Sum_probs=148.7
Q ss_pred hcCCccc-ceeccCccceEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHh-hcCCCCcccccceEEee----CC
Q 007107 409 TNSFSQE-FLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNM-SRLRHPNIVTLAGYCAE----HG 481 (618)
Q Consensus 409 ~~~~~~~-~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~ 481 (618)
.++|... +.||+|+||.||+|... +++.||+|+++.. ..+.+|++.+ +..+||||+++++++.. .+
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 88 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 88 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc
Confidence 3456665 78999999999999874 6899999998632 3456677776 55689999999999887 66
Q ss_pred eEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC---CCCcEEee
Q 007107 482 QRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD---ELNPHLSD 558 (618)
Q Consensus 482 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~---~~~~kl~D 558 (618)
..++||||+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~D 163 (299)
T 3m2w_A 89 CLLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 163 (299)
T ss_dssp EEEEEECCCCSCBHHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred eEEEEEeecCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEec
Confidence 789999999999999999742 235689999999999999999999999 9999999999999997 78999999
Q ss_pred ccccccCCCCCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 559 CGLAALTPNTERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 559 fgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
||++.... +..++.++|||||||++|||++|+.||.
T Consensus 164 fg~a~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~ 199 (299)
T 3m2w_A 164 FGFAKETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFY 199 (299)
T ss_dssp CTTCEECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCC
T ss_pred cccccccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 99885432 2346789999999999999999999995
No 252
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=1.2e-30 Score=285.81 Aligned_cols=185 Identities=16% Similarity=0.100 Sum_probs=130.0
Q ss_pred eccCccceEEEEE-EcCCcEEEEEEcCcccc--------cHHHHHHHHHHHHHhhcC-CCCcccccceEEeeCCeEEEEE
Q 007107 418 IGEGSLGRVYRAE-FANGKIMAVKKIDNAAL--------SLQEEDNFLEAVSNMSRL-RHPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 418 Lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~--------~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 487 (618)
.+.|+.|.+..++ .--|+.+++|.+..... .....++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4566666555543 22489999999864321 223456799999999999 6999999999999999999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCC
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPN 567 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~ 567 (618)
||++|++|.++++ ..++++.. +|+.||+.||+|+|++ |||||||||+|||++++|.+||+|||+|+....
T Consensus 322 Eyv~G~~L~d~i~----~~~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 322 EKLPGRLLSDMLA----AGEEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp ECCCSEEHHHHHH----TTCCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred ecCCCCcHHHHHH----hCCCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 9999999999997 34566654 5889999999999999 999999999999999999999999999987654
Q ss_pred CCccccccccccccccCccccccCCccccchhhhHHHHHHHHHhCCC
Q 007107 568 TERQVSTQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRK 614 (618)
Q Consensus 568 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~elltg~~ 614 (618)
.. ......+||+.|||||++.+ .+..++|+||+|++++++.++..
T Consensus 392 ~~-~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~ 436 (569)
T 4azs_A 392 DC-SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWS 436 (569)
T ss_dssp ---CCSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred CC-ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccc
Confidence 33 23345789999999999875 46778999999999887766543
No 253
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.95 E-value=3.5e-29 Score=284.93 Aligned_cols=214 Identities=17% Similarity=0.328 Sum_probs=157.4
Q ss_pred CCChHHHHHHHHHHHhCCCCCCCCCCCCCC----CCCCCCCC------------ceeEeeC-CCEEEEEcCCCCCccccc
Q 007107 38 TTDSSDVQALQVLYTSLNSPSVLTNWKGNE----GDPCGESW------------KGVACEG-SAVVSIDISGLGLSGTMG 100 (618)
Q Consensus 38 ~~~~~~~~al~~~~~~~~~~~~~~~w~~~~----~~~c~~~w------------~gv~c~~-~~v~~l~l~~~~l~~~~~ 100 (618)
++...|++||++||+++++| +|+.+. .+||+|.| .||.|+. ++|+.|+|++++|.|.+|
T Consensus 265 ~~~~~d~~ALl~~k~~l~~~----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip 340 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALDGK----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVP 340 (876)
T ss_dssp CHHHHHHHHHHHHHHHTTGG----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEEC
T ss_pred ccchHHHHHHHHHHHHcCCC----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCc
Confidence 34467999999999999886 787554 57766699 9999984 799999999999999999
Q ss_pred ccccCCCCCCEEee-cCCCCCCC---------------------------------------------------------
Q 007107 101 YLLSDLLSLRKFDL-SGNSIHDT--------------------------------------------------------- 122 (618)
Q Consensus 101 ~~l~~l~~L~~L~L-~~N~l~~~--------------------------------------------------------- 122 (618)
+.|++|++|+.|+| ++|.++|.
T Consensus 341 ~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~ 420 (876)
T 4ecn_A 341 DAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKD 420 (876)
T ss_dssp GGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCC
T ss_pred hHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccc
Confidence 99999999999999 88877665
Q ss_pred -------------------CCCCCC--CCcceEecccccccc-----------------cCCcccc--cCCCccEEEeec
Q 007107 123 -------------------IPYQLP--PNLTSLNLASNNFSG-----------------NLPYSIA--SMVSLSYLNVSR 162 (618)
Q Consensus 123 -------------------~p~~~~--~~L~~L~L~~N~l~~-----------------~~p~~~~--~l~~L~~L~L~~ 162 (618)
+|..+. ++|++|+|++|+|+| .+|..++ ++++|++|+|++
T Consensus 421 ~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~ 500 (876)
T 4ecn_A 421 SRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYN 500 (876)
T ss_dssp CCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEES
T ss_pred cccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcC
Confidence 444443 677777777777776 3777766 777777777777
Q ss_pred CCCCCchhhhhcCCCCCCeEEcccCc-CCC-CCCCCcccCC-------CcCeeeecccccccccc--ccCC-CCccEEEc
Q 007107 163 NSLTQSIGDIFGNLAGLATLDLSFNN-FSG-DLPNSFISLS-------NISSLYLQNNQVTGSLN--VFSG-LPLTTLNV 230 (618)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~-l~g-~~p~~~~~l~-------~L~~L~l~~N~l~~~~~--~~~~-~~L~~L~l 230 (618)
|++.+.+|..|+++++|+.|+|++|+ |+| .+|..++.++ +|++|+|++|+|+..+. .+.. .+|+.|+|
T Consensus 501 N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L~~L~~L~L 580 (876)
T 4ecn_A 501 CPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDC 580 (876)
T ss_dssp CTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTCTTCCEEEC
T ss_pred CCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhhcCCCCCEEEC
Confidence 77777777777777777777777776 776 6666555444 67777777777773333 2333 34777777
Q ss_pred ccccccccCchhh---hcccchhccCCcCC
Q 007107 231 ANNHFSGWIPREL---ISIRTFIYDGNSFD 257 (618)
Q Consensus 231 ~~N~l~g~ip~~~---~~l~~l~~~~N~~~ 257 (618)
++|+++ .+| .+ .+|+.|++++|.+.
T Consensus 581 s~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~ 608 (876)
T 4ecn_A 581 VHNKVR-HLE-AFGTNVKLTDLKLDYNQIE 608 (876)
T ss_dssp TTSCCC-BCC-CCCTTSEESEEECCSSCCS
T ss_pred CCCCcc-cch-hhcCCCcceEEECcCCccc
Confidence 777776 666 33 34556666666665
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.95 E-value=3.3e-28 Score=277.89 Aligned_cols=220 Identities=24% Similarity=0.319 Sum_probs=171.7
Q ss_pred hhccCCChHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCceeEeeCCCEEEEEcCCCCCccc---cc----------
Q 007107 34 LVQCTTDSSDVQALQVLYTSLNSPSVLTNWKGNEGDPCGESWKGVACEGSAVVSIDISGLGLSGT---MG---------- 100 (618)
Q Consensus 34 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~w~~~~~~~c~~~w~gv~c~~~~v~~l~l~~~~l~~~---~~---------- 100 (618)
++++.+.++|++||++||+++.||..+++|+ .+.||| .|+||.|+.++|+.|+|+++++.|. +|
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~~~~~l~~W~-~~~~~C--~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~ 80 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLPDKNLLPDWS-SNKNPC--TFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLE 80 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCSCTTSSTTCC-TTSCGG--GSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCC
T ss_pred CccccCCHHHHHHHHHHHhhCCCcccccCCC-CCCCCc--CCcceEECCCcEEEEECCCCCcCCccCccChhHhccCccc
Confidence 3344456789999999999998877899997 344666 8999999988999999999999987 55
Q ss_pred -------------ccccCCCCCCEEeecCCCCCCCCCC--CCC--CCcceEecccccccccCCccc-ccCCCccEEEeec
Q 007107 101 -------------YLLSDLLSLRKFDLSGNSIHDTIPY--QLP--PNLTSLNLASNNFSGNLPYSI-ASMVSLSYLNVSR 162 (618)
Q Consensus 101 -------------~~l~~l~~L~~L~L~~N~l~~~~p~--~~~--~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~ 162 (618)
..++.+++|++|+|++|.++|.+|. .+. ++|++|+|++|++++.+|..+ .++++|++|+|++
T Consensus 81 ~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~ 160 (768)
T 3rgz_A 81 SLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSA 160 (768)
T ss_dssp EEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCS
T ss_pred ccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCC
Confidence 4566777788888888888777776 554 778888888888877777665 6778888888888
Q ss_pred CCCCCchhhh---hcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCC-CCccEEEccccccccc
Q 007107 163 NSLTQSIGDI---FGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSG-LPLTTLNVANNHFSGW 238 (618)
Q Consensus 163 N~l~~~~p~~---~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~l~~N~l~g~ 238 (618)
|++++..|.. +.++++|++|+|++|++++.+|. ..+++|++|+|++|++++.++.+.. .+|++|+|++|.++|.
T Consensus 161 n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~ 238 (768)
T 3rgz_A 161 NSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGD 238 (768)
T ss_dssp SCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSC
T ss_pred CccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCcCCCc
Confidence 8888777766 67788888888888888876654 6788888888888888887766544 3589999999999888
Q ss_pred Cchhhh---cccchhccCCcCCC
Q 007107 239 IPRELI---SIRTFIYDGNSFDN 258 (618)
Q Consensus 239 ip~~~~---~l~~l~~~~N~~~~ 258 (618)
+|..+. +|+.|++.+|.+..
T Consensus 239 ~~~~l~~l~~L~~L~Ls~n~l~~ 261 (768)
T 3rgz_A 239 FSRAISTCTELKLLNISSNQFVG 261 (768)
T ss_dssp HHHHTTTCSSCCEEECCSSCCEE
T ss_pred ccHHHhcCCCCCEEECCCCcccC
Confidence 887664 55677888887753
No 255
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.95 E-value=1.5e-28 Score=274.59 Aligned_cols=213 Identities=18% Similarity=0.320 Sum_probs=181.1
Q ss_pred ChHHHHHHHHHHHhCCCCCCC---------CCCCCCCCCCCCCCC---ceeEeeC-CCEEEEEcCCCCCcccccccccCC
Q 007107 40 DSSDVQALQVLYTSLNSPSVL---------TNWKGNEGDPCGESW---KGVACEG-SAVVSIDISGLGLSGTMGYLLSDL 106 (618)
Q Consensus 40 ~~~~~~al~~~~~~~~~~~~~---------~~w~~~~~~~c~~~w---~gv~c~~-~~v~~l~l~~~~l~~~~~~~l~~l 106 (618)
...|++||.+++.+++++.|- .+|+.. .++| .| .||.|+. ++|+.|+|++++++|.+|++|++|
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-~~~c--~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L 104 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-KELD--MWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQL 104 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-SCGG--GTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGC
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-CCcc--cccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcC
Confidence 356999999999999876532 379753 5666 79 9999975 599999999999999999999999
Q ss_pred CCCCEEeecCCCC-------------------------------------------------------------------
Q 007107 107 LSLRKFDLSGNSI------------------------------------------------------------------- 119 (618)
Q Consensus 107 ~~L~~L~L~~N~l------------------------------------------------------------------- 119 (618)
++|++|+|++|.+
T Consensus 105 ~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~ 184 (636)
T 4eco_A 105 TELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLK 184 (636)
T ss_dssp TTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCC
T ss_pred ccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchh
Confidence 9999999999944
Q ss_pred -----------CCCCCCCCC--CCcceEeccccccccc-----------------CCcccc--cCCCccEEEeecCCCCC
Q 007107 120 -----------HDTIPYQLP--PNLTSLNLASNNFSGN-----------------LPYSIA--SMVSLSYLNVSRNSLTQ 167 (618)
Q Consensus 120 -----------~~~~p~~~~--~~L~~L~L~~N~l~~~-----------------~p~~~~--~l~~L~~L~L~~N~l~~ 167 (618)
+| +|..+. ++|++|+|++|+|+|. +|..++ ++++|++|+|++|++++
T Consensus 185 ~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~ 263 (636)
T 4eco_A 185 DTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLT 263 (636)
T ss_dssp TTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCS
T ss_pred hhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCc
Confidence 34 676665 8999999999999986 999999 99999999999999999
Q ss_pred chhhhhcCCCCCCeEEcccCc-CCC-CCCCCcccC------CCcCeeeecccccccccc--ccCCC-CccEEEccccccc
Q 007107 168 SIGDIFGNLAGLATLDLSFNN-FSG-DLPNSFISL------SNISSLYLQNNQVTGSLN--VFSGL-PLTTLNVANNHFS 236 (618)
Q Consensus 168 ~~p~~~~~l~~L~~L~l~~N~-l~g-~~p~~~~~l------~~L~~L~l~~N~l~~~~~--~~~~~-~L~~L~l~~N~l~ 236 (618)
.+|..|+++++|++|+|++|+ ++| .+|..++.+ ++|++|+|++|+++..+. .+... +|+.|+|++|+++
T Consensus 264 ~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l~ 343 (636)
T 4eco_A 264 KLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLE 343 (636)
T ss_dssp SCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCCE
T ss_pred cChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcCCcCc
Confidence 999999999999999999998 998 888888776 899999999999994444 34443 5999999999999
Q ss_pred ccCchhh---hcccchhccCCcCC
Q 007107 237 GWIPREL---ISIRTFIYDGNSFD 257 (618)
Q Consensus 237 g~ip~~~---~~l~~l~~~~N~~~ 257 (618)
|.+| .+ .+|+.|++++|.+.
T Consensus 344 g~ip-~~~~l~~L~~L~L~~N~l~ 366 (636)
T 4eco_A 344 GKLP-AFGSEIKLASLNLAYNQIT 366 (636)
T ss_dssp EECC-CCEEEEEESEEECCSSEEE
T ss_pred cchh-hhCCCCCCCEEECCCCccc
Confidence 9888 55 45667888888776
No 256
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.94 E-value=1.8e-27 Score=243.80 Aligned_cols=214 Identities=19% Similarity=0.252 Sum_probs=184.3
Q ss_pred CChHHHHHHHHHHHhCC-CC-CCCCCCC---CCCCCCCCCCCceeEeeC----------CCEEEEEcCCCCCcccccccc
Q 007107 39 TDSSDVQALQVLYTSLN-SP-SVLTNWK---GNEGDPCGESWKGVACEG----------SAVVSIDISGLGLSGTMGYLL 103 (618)
Q Consensus 39 ~~~~~~~al~~~~~~~~-~~-~~~~~w~---~~~~~~c~~~w~gv~c~~----------~~v~~l~l~~~~l~~~~~~~l 103 (618)
...+|.+||++||.++. ++ .++.+|. ....++| .|.|+.|.. .+|+.|+|++|++. .+|..+
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~--~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE--TRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSC--CSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhccccccccccc--ccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 44679999999999873 43 4678894 2334555 799999952 68999999999998 778889
Q ss_pred cCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcC------
Q 007107 104 SDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGN------ 175 (618)
Q Consensus 104 ~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~------ 175 (618)
+++++|++|+|++|.|+ .+|..+. ++|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|..+..
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~ 178 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCC
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhh
Confidence 99999999999999999 8888776 89999999999999 88999999999999999999999999987765
Q ss_pred ---CCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCC-CCccEEEcccccccccCchhh---hcccc
Q 007107 176 ---LAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSG-LPLTTLNVANNHFSGWIPREL---ISIRT 248 (618)
Q Consensus 176 ---l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~l~~N~l~g~ip~~~---~~l~~ 248 (618)
+++|++|+|++|+|+ .+|..+..+++|++|+|++|++++.++.+.. .+|+.|+|++|++.+.+|..+ .+|+.
T Consensus 179 ~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~ 257 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKR 257 (328)
T ss_dssp EEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCE
T ss_pred hccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCE
Confidence 999999999999999 8999999999999999999999987665544 459999999999999999876 45667
Q ss_pred hhccCCcCCC
Q 007107 249 FIYDGNSFDN 258 (618)
Q Consensus 249 l~~~~N~~~~ 258 (618)
|++.+|.+..
T Consensus 258 L~L~~n~~~~ 267 (328)
T 4fcg_A 258 LILKDCSNLL 267 (328)
T ss_dssp EECTTCTTCC
T ss_pred EECCCCCchh
Confidence 8888877643
No 257
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.94 E-value=2.8e-27 Score=257.78 Aligned_cols=187 Identities=13% Similarity=0.189 Sum_probs=149.1
Q ss_pred cccceeccCccceEEEEEEcCCcEEEEEEcCccccc------HHHHHHHHHHHHHhhcCCCCcccccceEEeeCCeEEEE
Q 007107 413 SQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALS------LQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 413 ~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 486 (618)
...+.||+|+||.||+|.. .++.+++|+....... ....+++.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4456899999999999954 4778888876443221 11245689999999999999999777777788888999
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||+++++|.++++. +..++.|+++||+|||++ +|+||||||+|||+++ .+||+|||+++...
T Consensus 418 mE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 418 MSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp EECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred EECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 999999999999962 457999999999999999 9999999999999998 99999999998876
Q ss_pred CCCccc------cccccccccccCcccccc--CCccccchhhhHHHHHHHHHhCCCCCC
Q 007107 567 NTERQV------STQMVGAFGYSAPEFALS--GIYTVKSDVYSFGVVMLELLTGRKPLD 617 (618)
Q Consensus 567 ~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlG~il~elltg~~Pf~ 617 (618)
...... .....||+.|||||++.. ..|+...|+|+..+-..+-+.++.+|.
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 543221 235689999999999987 668888999999999999988887775
No 258
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.91 E-value=1.8e-24 Score=247.07 Aligned_cols=179 Identities=28% Similarity=0.394 Sum_probs=133.8
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCccc-----------
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSI----------- 149 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~----------- 149 (618)
..++.|+|++|+++|.+|..++.+++|++|+|++|+++|.+|..+. ++|+.|+|++|+++|.+|..+
T Consensus 490 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~ 569 (768)
T 3rgz_A 490 TNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANF 569 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCST
T ss_pred CCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhc
Confidence 3566666666666666666666666666666666666666666554 677777777777776666443
Q ss_pred -----------------------------------------------------------ccCCCccEEEeecCCCCCchh
Q 007107 150 -----------------------------------------------------------ASMVSLSYLNVSRNSLTQSIG 170 (618)
Q Consensus 150 -----------------------------------------------------------~~l~~L~~L~L~~N~l~~~~p 170 (618)
..+++|++|||++|+++|.+|
T Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip 649 (768)
T 3rgz_A 570 IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIP 649 (768)
T ss_dssp TCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCC
T ss_pred cccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCC
Confidence 234667788888888888888
Q ss_pred hhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeecccccccccccc-CC-CCccEEEcccccccccCch--hhhcc
Q 007107 171 DIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVF-SG-LPLTTLNVANNHFSGWIPR--ELISI 246 (618)
Q Consensus 171 ~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~-~~L~~L~l~~N~l~g~ip~--~~~~l 246 (618)
..|+++++|+.|+|++|+|+|.+|..|+++++|++|+|++|+++|.+|.. .. ..|+.|||++|+|+|.||. .+.++
T Consensus 650 ~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~ 729 (768)
T 3rgz_A 650 KEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETF 729 (768)
T ss_dssp GGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGS
T ss_pred HHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccC
Confidence 88888888888888888888888888888888888888888888877653 32 3588888888888888886 46777
Q ss_pred cchhccCCcCCCCCC
Q 007107 247 RTFIYDGNSFDNGPA 261 (618)
Q Consensus 247 ~~l~~~~N~~~~~~~ 261 (618)
....+.||+..|+..
T Consensus 730 ~~~~~~gN~~Lcg~~ 744 (768)
T 3rgz_A 730 PPAKFLNNPGLCGYP 744 (768)
T ss_dssp CGGGGCSCTEEESTT
T ss_pred CHHHhcCCchhcCCC
Confidence 778888888888753
No 259
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=1.3e-23 Score=209.16 Aligned_cols=187 Identities=22% Similarity=0.269 Sum_probs=157.3
Q ss_pred CCceeEeeC-----------CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEeccccc
Q 007107 74 SWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNN 140 (618)
Q Consensus 74 ~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~ 140 (618)
.|..|.|.. ..++.|+|++|++++..+..|.++++|++|+|++|.|+...+..+. ++|++|+|++|+
T Consensus 17 ~~~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~ 96 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNK 96 (270)
T ss_dssp TTTEEECTTSCCSSCCSCCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSC
T ss_pred CCCEEEccCCCCCccCCCCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCc
Confidence 466677753 2478899999999988888999999999999999999955444333 899999999999
Q ss_pred ccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccc-
Q 007107 141 FSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV- 219 (618)
Q Consensus 141 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~- 219 (618)
+++..+..+..+++|++|+|++|++++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+.
T Consensus 97 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 176 (270)
T 2o6q_A 97 LQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGA 176 (270)
T ss_dssp CCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred CCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhH
Confidence 9987777889999999999999999999888999999999999999999966666689999999999999999987664
Q ss_pred cCC-CCccEEEcccccccccCchhh---hcccchhccCCcCCCCC
Q 007107 220 FSG-LPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNGP 260 (618)
Q Consensus 220 ~~~-~~L~~L~l~~N~l~g~ip~~~---~~l~~l~~~~N~~~~~~ 260 (618)
+.. .+|+.|+|++|++++..+..+ .+|+.|++.+|+|.|..
T Consensus 177 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 177 FDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSS
T ss_pred hccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCC
Confidence 333 469999999999996555444 56778999999999864
No 260
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.90 E-value=3.9e-24 Score=204.15 Aligned_cols=175 Identities=21% Similarity=0.253 Sum_probs=153.3
Q ss_pred CCCCCCCceeEeeC-----------CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEe
Q 007107 69 DPCGESWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLN 135 (618)
Q Consensus 69 ~~c~~~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~ 135 (618)
+.|.|.|.+|.|.. .+++.|+|++|++++..+..+..+++|++|+|++|+|++..+..+. ++|++|+
T Consensus 3 ~~C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 82 (208)
T 2o6s_A 3 SRCSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLN 82 (208)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEE
Confidence 46777999999974 2588999999999988888899999999999999999966554444 8999999
Q ss_pred cccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccc
Q 007107 136 LASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTG 215 (618)
Q Consensus 136 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 215 (618)
|++|+|++..+..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+..+++|++|+|++|.+++
T Consensus 83 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 162 (208)
T 2o6s_A 83 LSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 162 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC
T ss_pred CCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec
Confidence 99999997777778999999999999999998888889999999999999999997666678999999999999999887
Q ss_pred cccccCCCCccEEEcccccccccCchhhhcccc
Q 007107 216 SLNVFSGLPLTTLNVANNHFSGWIPRELISIRT 248 (618)
Q Consensus 216 ~~~~~~~~~L~~L~l~~N~l~g~ip~~~~~l~~ 248 (618)
..+ .|+.|+++.|+++|.+|+.+.++..
T Consensus 163 ~~~-----~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 TCP-----GIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CTT-----TTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CCC-----CHHHHHHHHHhCCceeeccCccccC
Confidence 543 5889999999999999998887653
No 261
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.90 E-value=4.8e-24 Score=216.91 Aligned_cols=174 Identities=29% Similarity=0.391 Sum_probs=130.4
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCC-CccEEE
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMV-SLSYLN 159 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~ 159 (618)
.+++.|+|++|++++.+|..|.++++|++|+|++|.+++.+|..+. ++|++|+|++|++++.+|..+..++ +|++|+
T Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~ 180 (313)
T 1ogq_A 101 TQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMT 180 (313)
T ss_dssp TTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEE
T ss_pred CCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEE
Confidence 4688899999999988898999999999999999999888887765 7888888888888888888888887 888888
Q ss_pred eecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCC-CCccEEEccccccccc
Q 007107 160 VSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSG-LPLTTLNVANNHFSGW 238 (618)
Q Consensus 160 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~l~~N~l~g~ 238 (618)
|++|++++.+|..|..++ |+.|+|++|++++.+|..|..+++|++|+|++|++++.++.+.. .+|+.|+|++|+++|.
T Consensus 181 L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~ 259 (313)
T 1ogq_A 181 ISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGT 259 (313)
T ss_dssp CCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEEC
T ss_pred CcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCc
Confidence 888888888887777776 77777777777777777777777777777777777665554333 2366666666666655
Q ss_pred Cchhhh---cccchhccCCcCC
Q 007107 239 IPRELI---SIRTFIYDGNSFD 257 (618)
Q Consensus 239 ip~~~~---~l~~l~~~~N~~~ 257 (618)
+|..+. +|+.|++++|++.
T Consensus 260 ~p~~l~~l~~L~~L~Ls~N~l~ 281 (313)
T 1ogq_A 260 LPQGLTQLKFLHSLNVSFNNLC 281 (313)
T ss_dssp CCGGGGGCTTCCEEECCSSEEE
T ss_pred CChHHhcCcCCCEEECcCCccc
Confidence 555443 3344555555544
No 262
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=3.6e-23 Score=203.53 Aligned_cols=183 Identities=22% Similarity=0.262 Sum_probs=156.8
Q ss_pred CCceeEeeCCCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCccccc
Q 007107 74 SWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIAS 151 (618)
Q Consensus 74 ~w~gv~c~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~ 151 (618)
.|.|+.|... .+.+++++++++. +|..+. ++|+.|+|++|++++..+..+. ++|++|+|++|+|++..|..|..
T Consensus 6 ~~~gC~C~~~-~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 81 (251)
T 3m19_A 6 TVTGCTCNEG-KKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDD 81 (251)
T ss_dssp HHHSSEEEGG-GTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTT
T ss_pred CCCceEcCCC-CeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhcc
Confidence 7999999632 4468999999975 555554 6899999999999988877665 89999999999999988888999
Q ss_pred CCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccc-cCC-CCccEEE
Q 007107 152 MVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLN 229 (618)
Q Consensus 152 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~ 229 (618)
+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++.++. +.. .+|+.|+
T Consensus 82 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 161 (251)
T 3m19_A 82 LTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLS 161 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEE
Confidence 99999999999999998889999999999999999999976666788999999999999999987763 433 4699999
Q ss_pred cccccccccCchhh---hcccchhccCCcCCCCC
Q 007107 230 VANNHFSGWIPREL---ISIRTFIYDGNSFDNGP 260 (618)
Q Consensus 230 l~~N~l~g~ip~~~---~~l~~l~~~~N~~~~~~ 260 (618)
|++|+|++..|..+ .+|+.|++.+|+|.|..
T Consensus 162 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 195 (251)
T 3m19_A 162 LSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSR 195 (251)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTS
T ss_pred CCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCc
Confidence 99999997766554 56778999999999863
No 263
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.89 E-value=1.9e-23 Score=208.67 Aligned_cols=161 Identities=14% Similarity=0.077 Sum_probs=127.7
Q ss_pred hcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccH----------------HHHHHHHHHHHHhhcCCCCcccc
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSL----------------QEEDNFLEAVSNMSRLRHPNIVT 472 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~----------------~~~~~~~~e~~~l~~l~h~niv~ 472 (618)
...|...+.||+|+||.||+|.+.+|+.||+|.++...... .....+.+|++++++++ | ++
T Consensus 89 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~ 165 (282)
T 1zar_A 89 GKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LA 165 (282)
T ss_dssp TSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SS
T ss_pred CeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CC
Confidence 34566778999999999999998779999999986432211 24567899999999998 5 77
Q ss_pred cceEEeeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCC
Q 007107 473 LAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDEL 552 (618)
Q Consensus 473 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~ 552 (618)
+.+++.. +..++||||+++++|.+ +.. .....++.|++.||+|||+. +|+||||||+|||++ ++
T Consensus 166 v~~~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~ 229 (282)
T 1zar_A 166 VPKVYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EE 229 (282)
T ss_dssp SCCEEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TT
T ss_pred cCeEEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CC
Confidence 7776544 55699999999999988 421 12446999999999999999 999999999999999 99
Q ss_pred CcEEeeccccccCCCCCccccccccccccccCcccccc----------CCccccchhhhH
Q 007107 553 NPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALS----------GIYTVKSDVYSF 602 (618)
Q Consensus 553 ~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~~DvwSl 602 (618)
.+||+|||+++. +..|+|||++.+ .+|...+|+|.+
T Consensus 230 ~vkl~DFG~a~~--------------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~~ 275 (282)
T 1zar_A 230 GIWIIDFPQSVE--------------VGEEGWREILERDVRNIITYFSRTYRTEKDINSA 275 (282)
T ss_dssp EEEECCCTTCEE--------------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred cEEEEECCCCeE--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHHH
Confidence 999999999853 234788998854 456677788763
No 264
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=1.3e-22 Score=203.78 Aligned_cols=176 Identities=22% Similarity=0.181 Sum_probs=157.4
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeec
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (618)
..++.|+|++|++++..+..|..+++|++|+|++|.|++..+....++|++|+|++|+|+ .+|..+..+++|++|+|++
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~ 109 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSF 109 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECCSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCS
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCCCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCC
Confidence 468999999999999999999999999999999999997666555599999999999999 7889999999999999999
Q ss_pred CCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeecccccccccccc-C-CCCccEEEcccccccccCc
Q 007107 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVF-S-GLPLTTLNVANNHFSGWIP 240 (618)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~-~~~L~~L~l~~N~l~g~ip 240 (618)
|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++.++.. . ..+|+.|+|++|+|+ .+|
T Consensus 110 N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip 188 (290)
T 1p9a_G 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIP 188 (290)
T ss_dssp SCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCC
T ss_pred CcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccC
Confidence 9999988899999999999999999999777777889999999999999999876643 3 346999999999999 778
Q ss_pred hhhh---cccchhccCCcCCCCC
Q 007107 241 RELI---SIRTFIYDGNSFDNGP 260 (618)
Q Consensus 241 ~~~~---~l~~l~~~~N~~~~~~ 260 (618)
..+. +++.+.+.+|+|.|..
T Consensus 189 ~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 189 KGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp TTTTTTCCCSEEECCSCCBCCSG
T ss_pred hhhcccccCCeEEeCCCCccCcC
Confidence 7654 4778899999999964
No 265
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.88 E-value=1.3e-22 Score=202.58 Aligned_cols=134 Identities=22% Similarity=0.239 Sum_probs=118.6
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEee
Q 007107 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (618)
.++.|+|++|++++..+..|.++++|++|+|++|++++..+..+. ++|++|+|++|++++..+..+.++++|++|+|+
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 588999999999988888999999999999999999976665555 899999999999998888889999999999999
Q ss_pred cCCCCCchhhhhcCCCCCCeEEcccCcCCCC-CCCCcccCCCcCeeeeccccccccc
Q 007107 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGD-LPNSFISLSNISSLYLQNNQVTGSL 217 (618)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~-~p~~~~~l~~L~~L~l~~N~l~~~~ 217 (618)
+|++++..+..++.+++|++|+|++|++++. +|..+..+++|++|+|++|+|++..
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~ 165 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 165 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEEC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCC
Confidence 9999988877899999999999999999863 6888999999999999999988754
No 266
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.87 E-value=6.3e-22 Score=198.51 Aligned_cols=175 Identities=21% Similarity=0.238 Sum_probs=150.0
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEeccccc-ccccCCcccccCCCccEEEe
Q 007107 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNN-FSGNLPYSIASMVSLSYLNV 160 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L 160 (618)
.++.|+|++|++++..+..|..+++|++|+|++|.+++..|..+. ++|++|+|++|+ ++...|..+..+++|++|+|
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l 112 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEEC
Confidence 588899999999988888899999999999999999987777766 899999999997 77777888999999999999
Q ss_pred ecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccc-cCC-CCccEEEccccccccc
Q 007107 161 SRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFSGW 238 (618)
Q Consensus 161 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~l~~N~l~g~ 238 (618)
++|++++..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|+|++..+. +.. .+|+.|+|++|.+++.
T Consensus 113 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 192 (285)
T 1ozn_A 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHV 192 (285)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccccc
Confidence 99999988888999999999999999999976667788999999999999999886653 333 4599999999999988
Q ss_pred Cchhh---hcccchhccCCcCCC
Q 007107 239 IPREL---ISIRTFIYDGNSFDN 258 (618)
Q Consensus 239 ip~~~---~~l~~l~~~~N~~~~ 258 (618)
.|..+ .+|+.|++.+|.+..
T Consensus 193 ~~~~~~~l~~L~~L~l~~n~l~~ 215 (285)
T 1ozn_A 193 HPHAFRDLGRLMTLYLFANNLSA 215 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSC
T ss_pred CHhHccCcccccEeeCCCCcCCc
Confidence 78766 456778888887764
No 267
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.87 E-value=6.8e-22 Score=211.80 Aligned_cols=185 Identities=18% Similarity=0.185 Sum_probs=150.9
Q ss_pred CCceeEeeC-----------CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEeccccc
Q 007107 74 SWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNN 140 (618)
Q Consensus 74 ~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~ 140 (618)
.|..|.|.. .+++.|+|++|+|++..+..|.++++|++|+|++|+|++..|..+. ++|++|+|++|+
T Consensus 55 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 55 QFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp SSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 467899974 3589999999999999999999999999999999999988777776 899999999999
Q ss_pred ccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCC-CCcccCCCcCeeeeccccccccccc
Q 007107 141 FSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLP-NSFISLSNISSLYLQNNQVTGSLNV 219 (618)
Q Consensus 141 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~~~~ 219 (618)
|++..+..|..+++|++|+|++|+|++..+..|.++++|+.|+|++|+..+.++ ..|..+++|++|+|++|+|++....
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~ 214 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNL 214 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCCC
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccccc
Confidence 998777889999999999999999998777788888899999998844333444 4577888888888888888876443
Q ss_pred cCCCCccEEEcccccccccCchhh---hcccchhccCCcCCC
Q 007107 220 FSGLPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDN 258 (618)
Q Consensus 220 ~~~~~L~~L~l~~N~l~g~ip~~~---~~l~~l~~~~N~~~~ 258 (618)
....+|+.|+|++|+|++..|..| .+|+.|++.+|.+..
T Consensus 215 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 256 (452)
T 3zyi_A 215 TPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL 256 (452)
T ss_dssp TTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCE
T ss_pred cccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCce
Confidence 334458888888888887777655 345567777776654
No 268
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.87 E-value=8.6e-22 Score=197.52 Aligned_cols=178 Identities=22% Similarity=0.243 Sum_probs=158.5
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCC-CCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEE
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNS-IHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (618)
.+++.|+|++|.+++..+..|..+++|++|+|++|. ++...|..+. ++|++|+|++|++++..|..+.++++|++|+
T Consensus 56 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 135 (285)
T 1ozn_A 56 RNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLY 135 (285)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEE
Confidence 579999999999999999999999999999999998 7766676665 8999999999999998899999999999999
Q ss_pred eecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccc-cCC-CCccEEEcccccccc
Q 007107 160 VSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFSG 237 (618)
Q Consensus 160 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~l~~N~l~g 237 (618)
|++|++++..+..|+.+++|+.|+|++|+|++..+..|..+++|++|+|++|++++..+. +.. .+|+.|+|++|++++
T Consensus 136 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 215 (285)
T 1ozn_A 136 LQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA 215 (285)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCc
Confidence 999999988888899999999999999999976666799999999999999999997554 333 469999999999997
Q ss_pred cCchhh---hcccchhccCCcCCCCC
Q 007107 238 WIPREL---ISIRTFIYDGNSFDNGP 260 (618)
Q Consensus 238 ~ip~~~---~~l~~l~~~~N~~~~~~ 260 (618)
..+..+ .+|+.|++.+|+|.|..
T Consensus 216 ~~~~~~~~l~~L~~L~l~~N~~~c~~ 241 (285)
T 1ozn_A 216 LPTEALAPLRALQYLRLNDNPWVCDC 241 (285)
T ss_dssp CCHHHHTTCTTCCEEECCSSCEECSG
T ss_pred CCHHHcccCcccCEEeccCCCccCCC
Confidence 665544 56778999999999864
No 269
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=1.3e-21 Score=192.43 Aligned_cols=167 Identities=23% Similarity=0.279 Sum_probs=149.2
Q ss_pred CCceeEeeC-----------CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEeccccc
Q 007107 74 SWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNN 140 (618)
Q Consensus 74 ~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~ 140 (618)
.+..|.|.. ..++.|+|++|++.+..+..|.++++|++|+|++|.|++..|..+. ++|++|+|++|+
T Consensus 15 ~~~~l~~~~~~l~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 94 (251)
T 3m19_A 15 GKKEVDCQGKSLDSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQ 94 (251)
T ss_dssp GGTEEECTTCCCSSCCSCCCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred CCeEEecCCCCccccCCCCCCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCc
Confidence 577788863 3588999999999999999999999999999999999988776665 899999999999
Q ss_pred ccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccc-
Q 007107 141 FSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV- 219 (618)
Q Consensus 141 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~- 219 (618)
|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|++.++.
T Consensus 95 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 174 (251)
T 3m19_A 95 LASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGA 174 (251)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred ccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHH
Confidence 9988888899999999999999999998888899999999999999999976677899999999999999999987763
Q ss_pred cCC-CCccEEEcccccccccCc
Q 007107 220 FSG-LPLTTLNVANNHFSGWIP 240 (618)
Q Consensus 220 ~~~-~~L~~L~l~~N~l~g~ip 240 (618)
+.. .+|+.|+|++|++++..+
T Consensus 175 ~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 175 FDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp TTTCTTCCEEECCSCCBCTTST
T ss_pred HhCCCCCCEEEeeCCceeCCcc
Confidence 433 469999999999997633
No 270
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.86 E-value=1.1e-21 Score=226.21 Aligned_cols=178 Identities=19% Similarity=0.206 Sum_probs=122.7
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEe
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 160 (618)
.+++.|+|++|++.+..|..|..+++|++|+|++|.+++..|..+. ++|+.|+|++|++++..+..|..+++|++|+|
T Consensus 290 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 369 (844)
T 3j0a_A 290 KDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDL 369 (844)
T ss_dssp CCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEE
T ss_pred CCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEEC
Confidence 3566667777777666666677777777777777777665555544 56666666666666555555555555555555
Q ss_pred ecCCCCCc------------------------------------------------------------------------
Q 007107 161 SRNSLTQS------------------------------------------------------------------------ 168 (618)
Q Consensus 161 ~~N~l~~~------------------------------------------------------------------------ 168 (618)
++|.+++.
T Consensus 370 s~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 449 (844)
T 3j0a_A 370 RDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSE 449 (844)
T ss_dssp ETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCS
T ss_pred CCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCccccccccccccc
Confidence 55554431
Q ss_pred ----------------------hhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCCcc
Q 007107 169 ----------------------IGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLT 226 (618)
Q Consensus 169 ----------------------~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~ 226 (618)
.+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++.++.....+|+
T Consensus 450 ~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~ 529 (844)
T 3j0a_A 450 NPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLE 529 (844)
T ss_dssp CTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCC
T ss_pred CCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhhcccc
Confidence 1122344455555666666666555666777788888888888888766655556799
Q ss_pred EEEcccccccccCchhhhcccchhccCCcCCCCC
Q 007107 227 TLNVANNHFSGWIPRELISIRTFIYDGNSFDNGP 260 (618)
Q Consensus 227 ~L~l~~N~l~g~ip~~~~~l~~l~~~~N~~~~~~ 260 (618)
.|+|++|+|++.+|..+.+++.|++.+|+|.|.+
T Consensus 530 ~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 530 ILDISRNQLLAPNPDVFVSLSVLDITHNKFICEC 563 (844)
T ss_dssp EEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSS
T ss_pred EEECCCCcCCCCChhHhCCcCEEEecCCCccccc
Confidence 9999999999999999999999999999999964
No 271
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.86 E-value=3.3e-22 Score=202.75 Aligned_cols=190 Identities=21% Similarity=0.275 Sum_probs=152.3
Q ss_pred CCCCCCCceeEeeC-----------CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCC--CCCCC--CCCcce
Q 007107 69 DPCGESWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDT--IPYQL--PPNLTS 133 (618)
Q Consensus 69 ~~c~~~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~--~p~~~--~~~L~~ 133 (618)
+.|.|.|.+|.|+. .+++.|+|++|+++...+..|.++++|++|+|++|.++.. +|..+ .++|++
T Consensus 3 ~~C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~ 82 (306)
T 2z66_A 3 SRCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKY 82 (306)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCE
T ss_pred CCCeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCE
Confidence 56777999999975 3689999999999976666789999999999999999833 23222 378999
Q ss_pred EecccccccccCCcccccCCCccEEEeecCCCCCchh-hhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeecccc
Q 007107 134 LNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIG-DIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQ 212 (618)
Q Consensus 134 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~ 212 (618)
|+|++|+++ .+|..+..+++|++|+|++|++++..+ ..+..+++|++|+|++|.+.+..|..+..+++|++|+|++|.
T Consensus 83 L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 161 (306)
T 2z66_A 83 LDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 161 (306)
T ss_dssp EECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCE
T ss_pred EECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCc
Confidence 999999988 567778889999999999999887665 678888899999999999888888888888899999999998
Q ss_pred ccc-ccc-ccCC-CCccEEEcccccccccCchhh---hcccchhccCCcCCCC
Q 007107 213 VTG-SLN-VFSG-LPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNG 259 (618)
Q Consensus 213 l~~-~~~-~~~~-~~L~~L~l~~N~l~g~ip~~~---~~l~~l~~~~N~~~~~ 259 (618)
+++ .++ .+.. .+|+.|+|++|++++..|..+ .+|+.|++++|.+...
T Consensus 162 l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 214 (306)
T 2z66_A 162 FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSL 214 (306)
T ss_dssp EGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBC
T ss_pred cccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCcc
Confidence 887 333 3333 358888888888887777655 4566788888877653
No 272
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.86 E-value=1.5e-21 Score=199.82 Aligned_cols=172 Identities=19% Similarity=0.272 Sum_probs=137.8
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCccccc---------
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIAS--------- 151 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~--------- 151 (618)
.+++.|+|++|+++ .+|..++.+++|++|+|++|.++ .+|..+. ++|++|+|++|++.+.+|..+..
T Consensus 104 ~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp TTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 46888888888888 78888888888888888888888 6776665 78888888888888888887664
Q ss_pred CCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeecccccccccccc-CC-CCccEEE
Q 007107 152 MVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVF-SG-LPLTTLN 229 (618)
Q Consensus 152 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~-~~L~~L~ 229 (618)
+++|++|+|++|+++ .+|..++.+++|+.|+|++|+++ .+|..+..+++|++|+|++|++.+.++.. .. .+|+.|+
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~ 259 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLI 259 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEE
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEE
Confidence 888888888888888 77778888888888888888888 46777888888888888888888876653 32 3588888
Q ss_pred cccccccccCchhhh---cccchhccCCcCCC
Q 007107 230 VANNHFSGWIPRELI---SIRTFIYDGNSFDN 258 (618)
Q Consensus 230 l~~N~l~g~ip~~~~---~l~~l~~~~N~~~~ 258 (618)
|++|++.+.+|..+. +|+.|++.+|++..
T Consensus 260 L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~ 291 (328)
T 4fcg_A 260 LKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLS 291 (328)
T ss_dssp CTTCTTCCBCCTTGGGCTTCCEEECTTCTTCC
T ss_pred CCCCCchhhcchhhhcCCCCCEEeCCCCCchh
Confidence 888888888887654 45567788877654
No 273
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.86 E-value=5.5e-21 Score=190.25 Aligned_cols=175 Identities=22% Similarity=0.240 Sum_probs=126.2
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeec
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (618)
.+++.|++++|.+... +.+..+++|++|+|++|.+++.....-.++|++|+|++|++++..+..+.++++|++|+|++
T Consensus 41 ~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 118 (272)
T 3rfs_A 41 NSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVE 118 (272)
T ss_dssp TTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCCGGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred cceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCchhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCC
Confidence 4577788888777642 35777888888888888877642222237788888888888877666777888888888888
Q ss_pred CCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeecccccccccccc-C-CCCccEEEcccccccccCc
Q 007107 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVF-S-GLPLTTLNVANNHFSGWIP 240 (618)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~-~~~L~~L~l~~N~l~g~ip 240 (618)
|++++..+..|+.+++|++|+|++|+|++..+..+..+++|++|+|++|+|++.++.. . ..+|+.|+|++|++++..|
T Consensus 119 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 198 (272)
T 3rfs_A 119 NQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPD 198 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCH
Confidence 8888777777777888888888888888666666777788888888888887765543 2 2458888888888887666
Q ss_pred hh---hhcccchhccCCcCCCC
Q 007107 241 RE---LISIRTFIYDGNSFDNG 259 (618)
Q Consensus 241 ~~---~~~l~~l~~~~N~~~~~ 259 (618)
.. +.+|+.|++.+|+|.|.
T Consensus 199 ~~~~~l~~L~~L~l~~N~~~~~ 220 (272)
T 3rfs_A 199 GVFDRLTSLQYIWLHDNPWDCT 220 (272)
T ss_dssp TTTTTCTTCCEEECCSSCBCCC
T ss_pred HHHhCCcCCCEEEccCCCcccc
Confidence 44 35566777788877764
No 274
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.85 E-value=3.5e-21 Score=205.50 Aligned_cols=185 Identities=18% Similarity=0.194 Sum_probs=147.0
Q ss_pred CCceeEeeC-----------CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEeccccc
Q 007107 74 SWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNN 140 (618)
Q Consensus 74 ~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~ 140 (618)
.|..|.|.. ..++.|+|++|++.+..+..|.++++|++|+|++|.|++..+..+. ++|++|+|++|+
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 467899974 3578899999999999999999999999999999999977766665 899999999999
Q ss_pred ccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCC-CCcccCCCcCeeeeccccccccccc
Q 007107 141 FSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLP-NSFISLSNISSLYLQNNQVTGSLNV 219 (618)
Q Consensus 141 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~~~~ 219 (618)
|++..+..|..+++|++|+|++|+|++..+..|.++++|+.|+|++|+..+.++ ..|.++++|++|+|++|+|+.....
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~ 203 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNL 203 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCCCC
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcccccc
Confidence 997777789999999999999999998777788888888888888844333444 4677888888888888888865443
Q ss_pred cCCCCccEEEcccccccccCchhh---hcccchhccCCcCCC
Q 007107 220 FSGLPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDN 258 (618)
Q Consensus 220 ~~~~~L~~L~l~~N~l~g~ip~~~---~~l~~l~~~~N~~~~ 258 (618)
....+|+.|+|++|+|++..|..| .+|+.|++.+|.+..
T Consensus 204 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 245 (440)
T 3zyj_A 204 TPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQV 245 (440)
T ss_dssp TTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred CCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeE
Confidence 333458888888888887666555 345566777776654
No 275
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.85 E-value=1.3e-20 Score=193.01 Aligned_cols=195 Identities=18% Similarity=0.234 Sum_probs=158.5
Q ss_pred CCCCCCCCCCCCCCCCceeEeeC-----------CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC
Q 007107 60 LTNWKGNEGDPCGESWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP 128 (618)
Q Consensus 60 ~~~w~~~~~~~c~~~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 128 (618)
...|.......|.|.|+.+.|.. ..++.|+|++|++++..+..|.++++|++|+|++|++++..|..+.
T Consensus 18 i~~~~~~cp~~c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 97 (330)
T 1xku_A 18 IEPMGPVCPFRCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFA 97 (330)
T ss_dssp ----CCCCCTTCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTT
T ss_pred cccccCCCCCCCcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhc
Confidence 34554433456777899999963 3578899999999998888999999999999999999988887776
Q ss_pred --CCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCC--CCCCCCcccCCCcC
Q 007107 129 --PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFS--GDLPNSFISLSNIS 204 (618)
Q Consensus 129 --~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~--g~~p~~~~~l~~L~ 204 (618)
++|++|+|++|+++ .+|..+. ++|++|++++|++++..+..|.++++|+.|+|++|.+. +..+..+..+++|+
T Consensus 98 ~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~ 174 (330)
T 1xku_A 98 PLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLS 174 (330)
T ss_dssp TCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCC
T ss_pred CCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcC
Confidence 89999999999999 6676654 79999999999999888888999999999999999996 36788888999999
Q ss_pred eeeeccccccccccccCCCCccEEEcccccccccCchhh---hcccchhccCCcCCC
Q 007107 205 SLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDN 258 (618)
Q Consensus 205 ~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip~~~---~~l~~l~~~~N~~~~ 258 (618)
+|++++|+++..+... ..+|+.|+|++|++++..|..+ .+|+.|++++|.+..
T Consensus 175 ~L~l~~n~l~~l~~~~-~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 230 (330)
T 1xku_A 175 YIRIADTNITTIPQGL-PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 230 (330)
T ss_dssp EEECCSSCCCSCCSSC-CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCE
T ss_pred EEECCCCccccCCccc-cccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCce
Confidence 9999999988644333 3668888888888887777665 456677788887654
No 276
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.84 E-value=3.6e-21 Score=206.31 Aligned_cols=150 Identities=21% Similarity=0.208 Sum_probs=132.1
Q ss_pred CCCCCCCceeEeeC----------CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCC-CCC--CCcceEe
Q 007107 69 DPCGESWKGVACEG----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPY-QLP--PNLTSLN 135 (618)
Q Consensus 69 ~~c~~~w~gv~c~~----------~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~-~~~--~~L~~L~ 135 (618)
+.|.|.+..|.|.. .+++.|+|++|.+++..|..|.++++|++|+|++|.+.+.++. .+. ++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 34543444588875 3589999999999999999999999999999999999877754 344 8999999
Q ss_pred cccccccccCCcccccCCCccEEEeecCCCCCchhhh--hcCCCCCCeEEcccCcCCCCCCCC-cccCCCcCeeeecccc
Q 007107 136 LASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDI--FGNLAGLATLDLSFNNFSGDLPNS-FISLSNISSLYLQNNQ 212 (618)
Q Consensus 136 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~L~~L~l~~N~ 212 (618)
|++|++++..|..|+++++|++|+|++|++++.++.. |..+++|++|+|++|++++..|.. +..+++|++|+|++|+
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999999999999999999999999999977765 999999999999999999887877 8899999999999999
Q ss_pred cccccc
Q 007107 213 VTGSLN 218 (618)
Q Consensus 213 l~~~~~ 218 (618)
+++..+
T Consensus 166 l~~~~~ 171 (455)
T 3v47_A 166 VKSICE 171 (455)
T ss_dssp BSCCCT
T ss_pred ccccCh
Confidence 998654
No 277
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.84 E-value=2.7e-21 Score=196.00 Aligned_cols=177 Identities=23% Similarity=0.249 Sum_probs=140.8
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCC-CCCC--CCcceEecccccccccCCcccccCCCccEEE
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIP-YQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (618)
.+++.|+|++|.+.+ +|..+..+++|++|+|++|++++..+ ..+. ++|++|+|++|++++..|..+..+++|++|+
T Consensus 78 ~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 156 (306)
T 2z66_A 78 TSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 156 (306)
T ss_dssp SCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEE
T ss_pred cccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEE
Confidence 567788888888764 56668888888888888888886554 2333 7888888888888888888888888889999
Q ss_pred eecCCCCC-chhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccc-cCC-CCccEEEccccccc
Q 007107 160 VSRNSLTQ-SIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFS 236 (618)
Q Consensus 160 L~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~l~~N~l~ 236 (618)
|++|++++ .+|..+..+++|+.|+|++|++++..|..+..+++|++|+|++|++++..+. +.. .+|+.|+|++|+++
T Consensus 157 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 236 (306)
T 2z66_A 157 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 236 (306)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCC
T ss_pred CCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCc
Confidence 98888886 5788888888899999999988877788888888899999999888876542 333 45888999999888
Q ss_pred ccCchhhh----cccchhccCCcCCCCC
Q 007107 237 GWIPRELI----SIRTFIYDGNSFDNGP 260 (618)
Q Consensus 237 g~ip~~~~----~l~~l~~~~N~~~~~~ 260 (618)
+..|..+. +|+.|++.+|++.|.+
T Consensus 237 ~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 237 TSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp BCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred ccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 88776553 5667888888888754
No 278
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.84 E-value=3.5e-21 Score=185.13 Aligned_cols=151 Identities=23% Similarity=0.249 Sum_probs=124.9
Q ss_pred EEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCC-C--CCCcceEecccccccccCCcccccCCCccEEEeecC
Q 007107 87 SIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQ-L--PPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRN 163 (618)
Q Consensus 87 ~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~-~--~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 163 (618)
.+++++|+++. +|..+. ..+++|+|++|+|++..|.. + .++|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 56677777765 555553 35689999999999776643 3 389999999999999888888999999999999999
Q ss_pred CCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccc-cCC-CCccEEEcccccccccCc
Q 007107 164 SLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFSGWIP 240 (618)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~l~~N~l~g~ip 240 (618)
+|++..+..|..+++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+. +.. .+|+.|+|++|.+++..+
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99998888899999999999999999988888999999999999999999987553 433 359999999999987655
No 279
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.84 E-value=5.8e-21 Score=186.26 Aligned_cols=189 Identities=16% Similarity=0.215 Sum_probs=157.1
Q ss_pred CCCCCCC-ce--eEeeC--------CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCC-CCCCCCCCCC--CCcceE
Q 007107 69 DPCGESW-KG--VACEG--------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNS-IHDTIPYQLP--PNLTSL 134 (618)
Q Consensus 69 ~~c~~~w-~g--v~c~~--------~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~p~~~~--~~L~~L 134 (618)
+.|.|.+ .+ |.|.. ..++.|+|++|++++..+..|.++++|++|+|++|+ +++..+..+. ++|++|
T Consensus 6 ~~C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L 85 (239)
T 2xwt_C 6 PPCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHI 85 (239)
T ss_dssp SSCSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEE
T ss_pred CCCeeCCCCcceeEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEE
Confidence 4455543 44 55953 579999999999999888899999999999999997 8865554554 899999
Q ss_pred eccc-ccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCC---eEEcccC-cCCCCCCCCcccCCCcC-eeee
Q 007107 135 NLAS-NNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLA---TLDLSFN-NFSGDLPNSFISLSNIS-SLYL 208 (618)
Q Consensus 135 ~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~---~L~l~~N-~l~g~~p~~~~~l~~L~-~L~l 208 (618)
+|++ |++++..+..|.++++|++|+|++|++++ +|. |..+++|+ .|+|++| ++++..+..|..+++|+ +|+|
T Consensus 86 ~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l 163 (239)
T 2xwt_C 86 EIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKL 163 (239)
T ss_dssp EEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEEC
T ss_pred ECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEc
Confidence 9999 99998777899999999999999999997 565 88999998 9999999 99976667799999999 9999
Q ss_pred ccccccccccc-cCCCCccEEEccccc-ccccCchhh----hcccchhccCCcCCCC
Q 007107 209 QNNQVTGSLNV-FSGLPLTTLNVANNH-FSGWIPREL----ISIRTFIYDGNSFDNG 259 (618)
Q Consensus 209 ~~N~l~~~~~~-~~~~~L~~L~l~~N~-l~g~ip~~~----~~l~~l~~~~N~~~~~ 259 (618)
++|+|+...+. +...+|+.|+|++|+ +++..+..+ .+|+.|++++|++..-
T Consensus 164 ~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l 220 (239)
T 2xwt_C 164 YNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL 220 (239)
T ss_dssp CSCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC
T ss_pred CCCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC
Confidence 99999954433 344569999999995 986555544 5677889999988754
No 280
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.84 E-value=1.9e-20 Score=194.26 Aligned_cols=171 Identities=22% Similarity=0.218 Sum_probs=145.4
Q ss_pred EEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC---CCcceEecccccccccCCcccccCCCccEEEeecC
Q 007107 87 SIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP---PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRN 163 (618)
Q Consensus 87 ~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 163 (618)
.+++++++|+. +|..+. ..|+.|+|++|+|++..+..+. ++|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 46777778865 455543 4589999999999977776552 89999999999999888889999999999999999
Q ss_pred CCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccC-----CCCccEEEccccccccc
Q 007107 164 SLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFS-----GLPLTTLNVANNHFSGW 238 (618)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-----~~~L~~L~l~~N~l~g~ 238 (618)
+|++..+..|..+++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+... ..+|+.|+|++|+|++.
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 9998888899999999999999999998889999999999999999999998665532 34699999999999965
Q ss_pred Cchhhhcc-----cchhccCCcCCCCC
Q 007107 239 IPRELISI-----RTFIYDGNSFDNGP 260 (618)
Q Consensus 239 ip~~~~~l-----~~l~~~~N~~~~~~ 260 (618)
.+..+..+ +.|++.+|+|.|..
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred CHHHhhhccHhhcceEEecCCCccCCc
Confidence 55666554 56899999999964
No 281
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.84 E-value=5e-21 Score=180.00 Aligned_cols=171 Identities=20% Similarity=0.248 Sum_probs=132.0
Q ss_pred EEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCC-CC--CCcceEecccccccccCCcccccCCCccEEEeecC
Q 007107 87 SIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQ-LP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRN 163 (618)
Q Consensus 87 ~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~-~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 163 (618)
.|++++|+|. .+|..+.. +|++|+|++|+|++..+.. +. ++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 12 ~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 4566777774 45665544 8999999999998766643 33 88999999999999888899999999999999999
Q ss_pred CCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCC-ccEEEcccccccccCchh
Q 007107 164 SLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLP-LTTLNVANNHFSGWIPRE 242 (618)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-L~~L~l~~N~l~g~ip~~ 242 (618)
+|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+++..+...... ++...+..+......|..
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~~ 168 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSK 168 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSSTT
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCChH
Confidence 9998888889999999999999999998888889999999999999999987654311111 223344555555566777
Q ss_pred hhcccchhccCCcCCCCC
Q 007107 243 LISIRTFIYDGNSFDNGP 260 (618)
Q Consensus 243 ~~~l~~l~~~~N~~~~~~ 260 (618)
+......++..+.+.|..
T Consensus 169 l~~~~l~~l~~~~~~C~~ 186 (192)
T 1w8a_A 169 VRDVQIKDLPHSEFKCSS 186 (192)
T ss_dssp TTTSBGGGSCTTTCCCCC
T ss_pred HcCCChhhCcHhhcCcCC
Confidence 777777777778787754
No 282
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.84 E-value=1.5e-20 Score=180.64 Aligned_cols=156 Identities=26% Similarity=0.323 Sum_probs=123.3
Q ss_pred CCCCCCCceeEeeCCCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCC
Q 007107 69 DPCGESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLP 146 (618)
Q Consensus 69 ~~c~~~w~gv~c~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p 146 (618)
..|.|.|..|.|. +++++. +|..+. ++|+.|+|++|+|++..+..+. ++|+.|+|++|+|++..|
T Consensus 7 ~~C~C~~~~v~c~----------~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~ 73 (220)
T 2v9t_B 7 AACTCSNNIVDCR----------GKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAP 73 (220)
T ss_dssp TTSEEETTEEECT----------TSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECT
T ss_pred CCCEECCCEEEcC----------CCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCH
Confidence 4465566666554 455543 344443 6788999999999876665554 789999999999998888
Q ss_pred cccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccc-cCC-CC
Q 007107 147 YSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LP 224 (618)
Q Consensus 147 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~ 224 (618)
..|.++++|++|+|++|+|+...+..|..+++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+. +.. .+
T Consensus 74 ~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 153 (220)
T 2v9t_B 74 DAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA 153 (220)
T ss_dssp TTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred HHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCC
Confidence 8899999999999999999977777788899999999999999987788888999999999999999887654 333 35
Q ss_pred ccEEEcccccccc
Q 007107 225 LTTLNVANNHFSG 237 (618)
Q Consensus 225 L~~L~l~~N~l~g 237 (618)
|+.|+|++|++..
T Consensus 154 L~~L~L~~N~~~c 166 (220)
T 2v9t_B 154 IQTMHLAQNPFIC 166 (220)
T ss_dssp CCEEECCSSCEEC
T ss_pred CCEEEeCCCCcCC
Confidence 8999999998874
No 283
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.83 E-value=1e-20 Score=188.35 Aligned_cols=171 Identities=23% Similarity=0.270 Sum_probs=148.4
Q ss_pred CCCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEE
Q 007107 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (618)
Q Consensus 82 ~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (618)
-.+++.|+|++|.+.+. +.+..+++|++|+|++|.+++..+..+. ++|++|+|++|++++..+..+..+++|++|+
T Consensus 62 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp CTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 46799999999999874 5899999999999999999977775554 8999999999999988888899999999999
Q ss_pred eecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeecccccccccccc-C-CCCccEEEcccccccc
Q 007107 160 VSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVF-S-GLPLTTLNVANNHFSG 237 (618)
Q Consensus 160 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~-~~~L~~L~l~~N~l~g 237 (618)
|++|++++..+..|+.+++|+.|+|++|+|++..+..+..+++|++|+|++|+|++.++.. . ..+|+.|+|++|.+++
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 9999999988888999999999999999999877777899999999999999999977653 3 3469999999999997
Q ss_pred cCchhhhcccchhccCCcCCC
Q 007107 238 WIPRELISIRTFIYDGNSFDN 258 (618)
Q Consensus 238 ~ip~~~~~l~~l~~~~N~~~~ 258 (618)
..| +++.+.+..|.+..
T Consensus 220 ~~~----~l~~l~~~~n~~~g 236 (272)
T 3rfs_A 220 TCP----GIRYLSEWINKHSG 236 (272)
T ss_dssp CTT----TTHHHHHHHHHTGG
T ss_pred cCc----HHHHHHHHHHhCCC
Confidence 765 45666666666553
No 284
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.83 E-value=7.7e-21 Score=193.19 Aligned_cols=175 Identities=18% Similarity=0.172 Sum_probs=116.5
Q ss_pred CCEEEEEcCCCCCcccccccc--cCCCCCCEEeecCCCCCCCCCCCCC-------CCcceEecccccccccCCcccccCC
Q 007107 83 SAVVSIDISGLGLSGTMGYLL--SDLLSLRKFDLSGNSIHDTIPYQLP-------PNLTSLNLASNNFSGNLPYSIASMV 153 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l--~~l~~L~~L~L~~N~l~~~~p~~~~-------~~L~~L~L~~N~l~~~~p~~~~~l~ 153 (618)
.+++.|+|++|++++.+|..+ ..+++|++|+|++|++++. |..+. ++|++|+|++|++++..|..+++++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 467777777777777777765 7777777777777777765 54332 6777777777777776667777777
Q ss_pred CccEEEeecCCCCCc--hhhhh--cCCCCCCeEEcccCcCCC--CCC-CCcccCCCcCeeeecccccccccc--ccC-CC
Q 007107 154 SLSYLNVSRNSLTQS--IGDIF--GNLAGLATLDLSFNNFSG--DLP-NSFISLSNISSLYLQNNQVTGSLN--VFS-GL 223 (618)
Q Consensus 154 ~L~~L~L~~N~l~~~--~p~~~--~~l~~L~~L~l~~N~l~g--~~p-~~~~~l~~L~~L~l~~N~l~~~~~--~~~-~~ 223 (618)
+|++|+|++|++++. +|..+ ..+++|++|+|++|+|++ .++ ..+..+++|++|+|++|+|++.++ .+. ..
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~ 253 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPS 253 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCT
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcC
Confidence 777777777777665 23344 667777777777777762 122 223456677777777777777552 222 23
Q ss_pred CccEEEcccccccccCchhhh-cccchhccCCcCCCC
Q 007107 224 PLTTLNVANNHFSGWIPRELI-SIRTFIYDGNSFDNG 259 (618)
Q Consensus 224 ~L~~L~l~~N~l~g~ip~~~~-~l~~l~~~~N~~~~~ 259 (618)
+|+.|+|++|+|+ .+|..+. +|+.|++++|.+...
T Consensus 254 ~L~~L~Ls~N~l~-~ip~~~~~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 254 QLNSLNLSFTGLK-QVPKGLPAKLSVLDLSYNRLDRN 289 (312)
T ss_dssp TCCEEECTTSCCS-SCCSSCCSEEEEEECCSSCCCSC
T ss_pred CCCEEECCCCccC-hhhhhccCCceEEECCCCCCCCC
Confidence 5777777777777 6666553 667777777776554
No 285
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.83 E-value=1.8e-20 Score=202.20 Aligned_cols=184 Identities=16% Similarity=0.185 Sum_probs=161.3
Q ss_pred CCceeEeeC-----------CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEeccccc
Q 007107 74 SWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNN 140 (618)
Q Consensus 74 ~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~ 140 (618)
.|..|.|.. ..++.|+|++|+|++..+..|.++++|++|+|++|.+++..|..+. ++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 578999974 3578999999999999999999999999999999999988887776 899999999999
Q ss_pred ccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccc-
Q 007107 141 FSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV- 219 (618)
Q Consensus 141 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~- 219 (618)
+++..+..|.++++|++|+|++|++++..|..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++..+.
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 171 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA 171 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHH
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhH
Confidence 9977777889999999999999999999999999999999999999999988899999999999999999999986653
Q ss_pred cC-CCCccEEEcccccccccCchhh---hcccchhccCCcCC
Q 007107 220 FS-GLPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFD 257 (618)
Q Consensus 220 ~~-~~~L~~L~l~~N~l~g~ip~~~---~~l~~l~~~~N~~~ 257 (618)
+. ..+|+.|+|++|.+++..+..+ .+|+.|++.+|++.
T Consensus 172 l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~ 213 (477)
T 2id5_A 172 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYL 213 (477)
T ss_dssp HTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTC
T ss_pred hcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccc
Confidence 33 3469999999999997666554 45667778877653
No 286
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.83 E-value=3.9e-21 Score=195.40 Aligned_cols=172 Identities=17% Similarity=0.242 Sum_probs=78.2
Q ss_pred EEEEEcCCCCC-ccccccccc-------CCCCCCEEeecCCCCCCCCCCCC--C--CCcceEecccccccccCCcccccC
Q 007107 85 VVSIDISGLGL-SGTMGYLLS-------DLLSLRKFDLSGNSIHDTIPYQL--P--PNLTSLNLASNNFSGNLPYSIASM 152 (618)
Q Consensus 85 v~~l~l~~~~l-~~~~~~~l~-------~l~~L~~L~L~~N~l~~~~p~~~--~--~~L~~L~L~~N~l~~~~p~~~~~l 152 (618)
++.|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..+ . ++|++|+|++|++++. |..++.+
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l 143 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAEL 143 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHH
Confidence 44445555544 233343333 44555555555555554444433 1 4455555555555544 4444444
Q ss_pred -----CCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCC--CCCCc--ccCCCcCeeeeccccccccc--c-c-
Q 007107 153 -----VSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGD--LPNSF--ISLSNISSLYLQNNQVTGSL--N-V- 219 (618)
Q Consensus 153 -----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~--~p~~~--~~l~~L~~L~l~~N~l~~~~--~-~- 219 (618)
++|++|+|++|++++..|..|+.+++|++|+|++|++.|. +|..+ ..+++|++|+|++|+|++.. + .
T Consensus 144 ~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 223 (312)
T 1wwl_A 144 QQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSAL 223 (312)
T ss_dssp HTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHH
T ss_pred HHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHH
Confidence 4555555555555544445555555555555555554432 12222 44455555555555554211 1 1
Q ss_pred c-CCCCccEEEcccccccccCch-h---hhcccchhccCCcCC
Q 007107 220 F-SGLPLTTLNVANNHFSGWIPR-E---LISIRTFIYDGNSFD 257 (618)
Q Consensus 220 ~-~~~~L~~L~l~~N~l~g~ip~-~---~~~l~~l~~~~N~~~ 257 (618)
+ ...+|+.|+|++|++++.+|. . +.+|+.|++++|.+.
T Consensus 224 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 266 (312)
T 1wwl_A 224 AAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK 266 (312)
T ss_dssp HHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS
T ss_pred HhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC
Confidence 1 112355555555555544321 1 234444555555444
No 287
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.83 E-value=3.1e-20 Score=190.45 Aligned_cols=186 Identities=18% Similarity=0.241 Sum_probs=157.4
Q ss_pred CCCCCCCceeEeeC-----------CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEe
Q 007107 69 DPCGESWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLN 135 (618)
Q Consensus 69 ~~c~~~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~ 135 (618)
..|.|.|+.+.|.. .+++.|+|++|++.+..+..|.++++|++|+|++|++++..|..+. ++|++|+
T Consensus 29 ~~c~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 29 FGCHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLY 108 (332)
T ss_dssp SSCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEE
T ss_pred CCCcccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEE
Confidence 45666899999974 3688999999999998888999999999999999999988787776 8999999
Q ss_pred cccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCC--CCCCCCcccCCCcCeeeeccccc
Q 007107 136 LASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFS--GDLPNSFISLSNISSLYLQNNQV 213 (618)
Q Consensus 136 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~--g~~p~~~~~l~~L~~L~l~~N~l 213 (618)
|++|+++ .+|..+. ++|++|+|++|++++..+..|..+++|+.|+|++|.++ +..|..+..+ +|++|++++|++
T Consensus 109 L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l 184 (332)
T 2ft3_A 109 ISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKL 184 (332)
T ss_dssp CCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBC
T ss_pred CCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCC
Confidence 9999999 6676665 89999999999999888888999999999999999996 4778888888 999999999999
Q ss_pred cccccccCCCCccEEEcccccccccCchhh---hcccchhccCCcCCCC
Q 007107 214 TGSLNVFSGLPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNG 259 (618)
Q Consensus 214 ~~~~~~~~~~~L~~L~l~~N~l~g~ip~~~---~~l~~l~~~~N~~~~~ 259 (618)
++.+..+ ..+|+.|+|++|.+++..|..+ .+|+.|++++|.+...
T Consensus 185 ~~l~~~~-~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~ 232 (332)
T 2ft3_A 185 TGIPKDL-PETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMI 232 (332)
T ss_dssp SSCCSSS-CSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCC
T ss_pred CccCccc-cCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcC
Confidence 8744333 3678999999999987766555 4567788888877653
No 288
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.83 E-value=3.7e-20 Score=179.24 Aligned_cols=155 Identities=23% Similarity=0.248 Sum_probs=130.0
Q ss_pred CCCCceeEeeCCCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCccc
Q 007107 72 GESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSI 149 (618)
Q Consensus 72 ~~~w~gv~c~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~ 149 (618)
.|+|++|.|...+++ .+|..+. ++|++|+|++|+|++..|..+. ++|+.|+|++|+|+...+..|
T Consensus 18 ~Cs~~~v~c~~~~l~-----------~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~ 84 (229)
T 3e6j_A 18 SCSGTTVDCRSKRHA-----------SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVF 84 (229)
T ss_dssp EEETTEEECTTSCCS-----------SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred EEeCCEeEccCCCcC-----------ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhc
Confidence 348999999755432 3444433 8899999999999988887665 899999999999987666778
Q ss_pred ccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccc-cCC-CCccE
Q 007107 150 ASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTT 227 (618)
Q Consensus 150 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~ 227 (618)
..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..+. +.. .+|+.
T Consensus 85 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 163 (229)
T 3e6j_A 85 DSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTH 163 (229)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCE
Confidence 99999999999999999888888999999999999999999 8899999999999999999999987654 333 46999
Q ss_pred EEcccccccccCc
Q 007107 228 LNVANNHFSGWIP 240 (618)
Q Consensus 228 L~l~~N~l~g~ip 240 (618)
|+|++|.+++..+
T Consensus 164 L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 164 AYLFGNPWDCECR 176 (229)
T ss_dssp EECTTSCBCTTBG
T ss_pred EEeeCCCccCCcc
Confidence 9999999986554
No 289
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.83 E-value=1.2e-20 Score=195.31 Aligned_cols=187 Identities=18% Similarity=0.220 Sum_probs=158.0
Q ss_pred CCCCCceeEeeC-------------CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEe
Q 007107 71 CGESWKGVACEG-------------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLN 135 (618)
Q Consensus 71 c~~~w~gv~c~~-------------~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~ 135 (618)
|.|.|.|+ |+. .+++.|+|++|++++..+..+.++++|++|+|++|++++..|..+. ++|++|+
T Consensus 28 ~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (353)
T 2z80_A 28 LSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLD 106 (353)
T ss_dssp CEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEE
Confidence 33478887 642 3689999999999998888999999999999999999987776665 8999999
Q ss_pred cccccccccCCcccccCCCccEEEeecCCCCCchh-hhhcCCCCCCeEEcccC-cCCCCCCCCcccCCCcCeeeeccccc
Q 007107 136 LASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIG-DIFGNLAGLATLDLSFN-NFSGDLPNSFISLSNISSLYLQNNQV 213 (618)
Q Consensus 136 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N-~l~g~~p~~~~~l~~L~~L~l~~N~l 213 (618)
|++|++++..+..+.++++|++|+|++|++++..+ ..|..+++|+.|+|++| .+.+..|..|..+++|++|++++|++
T Consensus 107 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l 186 (353)
T 2z80_A 107 LSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDL 186 (353)
T ss_dssp CCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCc
Confidence 99999997666669999999999999999996555 58999999999999999 57766678899999999999999999
Q ss_pred cccccc-cCC-CCccEEEcccccccccCchh----hhcccchhccCCcCCCC
Q 007107 214 TGSLNV-FSG-LPLTTLNVANNHFSGWIPRE----LISIRTFIYDGNSFDNG 259 (618)
Q Consensus 214 ~~~~~~-~~~-~~L~~L~l~~N~l~g~ip~~----~~~l~~l~~~~N~~~~~ 259 (618)
++..+. +.. .+|+.|++++|+++ .+|.. +.+|+.|++++|.+...
T Consensus 187 ~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~ 237 (353)
T 2z80_A 187 QSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTF 237 (353)
T ss_dssp CEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTC
T ss_pred CccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCccccc
Confidence 987554 333 35999999999996 55543 46788999999988754
No 290
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.82 E-value=9.5e-21 Score=192.32 Aligned_cols=173 Identities=18% Similarity=0.208 Sum_probs=101.2
Q ss_pred CEEEEEcCCCCCcccccccc--cCCCCCCEEeecCCCCCCCCCC------CCCCCcceEecccccccccCCcccccCCCc
Q 007107 84 AVVSIDISGLGLSGTMGYLL--SDLLSLRKFDLSGNSIHDTIPY------QLPPNLTSLNLASNNFSGNLPYSIASMVSL 155 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l--~~l~~L~~L~L~~N~l~~~~p~------~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L 155 (618)
+++.|+|++|++.+..|..+ ..+++|++|+|++|.+++..+. ...++|++|+|++|++++..|..++.+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 47777777777777777766 6777777777777777764441 113667777777777776666667777777
Q ss_pred cEEEeecCCCCCc--hh--hhhcCCCCCCeEEcccCcCCCCCCC----CcccCCCcCeeeecccccccccc-ccCC----
Q 007107 156 SYLNVSRNSLTQS--IG--DIFGNLAGLATLDLSFNNFSGDLPN----SFISLSNISSLYLQNNQVTGSLN-VFSG---- 222 (618)
Q Consensus 156 ~~L~L~~N~l~~~--~p--~~~~~l~~L~~L~l~~N~l~g~~p~----~~~~l~~L~~L~l~~N~l~~~~~-~~~~---- 222 (618)
++|+|++|++++. ++ ..++.+++|++|+|++|+|+ .++. .+..+++|++|+|++|+|++..| .+..
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 7777777776542 11 12245556666666666664 2222 13455566666666666655422 1111
Q ss_pred CCccEEEcccccccccCchhh-hcccchhccCCcCCC
Q 007107 223 LPLTTLNVANNHFSGWIPREL-ISIRTFIYDGNSFDN 258 (618)
Q Consensus 223 ~~L~~L~l~~N~l~g~ip~~~-~~l~~l~~~~N~~~~ 258 (618)
.+|+.|+|++|+|+ .+|..+ .+|+.|++++|.+..
T Consensus 251 ~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l~~ 286 (310)
T 4glp_A 251 SALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRLNR 286 (310)
T ss_dssp TTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCCCS
T ss_pred CcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcCCC
Confidence 24566666666665 444433 355555566665553
No 291
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.82 E-value=2.5e-20 Score=206.70 Aligned_cols=132 Identities=20% Similarity=0.251 Sum_probs=95.7
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEee
Q 007107 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (618)
+++.|++++|.+....+..+..+++|++|+|++|.|++..|..+. ++|++|+|++|.|++..|..|+++++|++|+|+
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 131 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 131 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEee
Confidence 456677777777666666677777777777777777766665554 677777777777777767777777777777777
Q ss_pred cCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccc
Q 007107 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTG 215 (618)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 215 (618)
+|+|++..+..|+++++|++|+|++|.|++..|..|..+++|++|+|++|.|++
T Consensus 132 ~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 132 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred CCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 777776666666777777777777777776666677777777777777777665
No 292
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.82 E-value=4.3e-20 Score=197.96 Aligned_cols=105 Identities=18% Similarity=0.292 Sum_probs=64.1
Q ss_pred CccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccc-cCC-CCccEEEcc
Q 007107 154 SLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVA 231 (618)
Q Consensus 154 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~l~ 231 (618)
+|++|+|++|++++.+|..|+.+++|+.|+|++|++++..|..|..+++|++|+|++|+|++..+. +.. .+|+.|+|+
T Consensus 276 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 355 (455)
T 3v47_A 276 GVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLS 355 (455)
T ss_dssp CCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECC
T ss_pred CceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECC
Confidence 455555555566666666666666666666666666666666666666666666666666665432 222 346666666
Q ss_pred cccccccCchhh---hcccchhccCCcCCC
Q 007107 232 NNHFSGWIPREL---ISIRTFIYDGNSFDN 258 (618)
Q Consensus 232 ~N~l~g~ip~~~---~~l~~l~~~~N~~~~ 258 (618)
+|++++..|..+ .+|+.|++++|.+..
T Consensus 356 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 385 (455)
T 3v47_A 356 YNHIRALGDQSFLGLPNLKELALDTNQLKS 385 (455)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCcccccChhhccccccccEEECCCCcccc
Confidence 666666555544 344556666666554
No 293
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.82 E-value=6.6e-20 Score=195.60 Aligned_cols=178 Identities=19% Similarity=0.220 Sum_probs=116.4
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEe
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 160 (618)
.+++.|+|++|+|++..+..|.++++|++|+|++|+|++..+..+. ++|++|+|++|+|+...+..|.++++|++|+|
T Consensus 88 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l 167 (440)
T 3zyj_A 88 RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL 167 (440)
T ss_dssp SSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCC
Confidence 5788999999999988888999999999999999999866554454 78899999998888666666666666666666
Q ss_pred ecCCCCCch-hhhhcCCCCCCeEEccc----------------------CcCCCCCCCCcccCCCcCeeeeccccccccc
Q 007107 161 SRNSLTQSI-GDIFGNLAGLATLDLSF----------------------NNFSGDLPNSFISLSNISSLYLQNNQVTGSL 217 (618)
Q Consensus 161 ~~N~l~~~~-p~~~~~l~~L~~L~l~~----------------------N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~ 217 (618)
++|+..+.+ +..|.++++|+.|+|++ |+|++..|..|..+++|+.|+|++|+|++..
T Consensus 168 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 247 (440)
T 3zyj_A 168 GELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIE 247 (440)
T ss_dssp CCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEEC
T ss_pred CCCCCcceeCcchhhcccccCeecCCCCcCccccccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEC
Confidence 663333233 33455555555555555 5554444555555555555555555555543
Q ss_pred cc-cCC-CCccEEEcccccccccCchhh---hcccchhccCCcCCCCC
Q 007107 218 NV-FSG-LPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNGP 260 (618)
Q Consensus 218 ~~-~~~-~~L~~L~l~~N~l~g~ip~~~---~~l~~l~~~~N~~~~~~ 260 (618)
+. +.. .+|+.|+|++|+|++..+..+ .+|+.|++.+|+|.|..
T Consensus 248 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 248 RNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNC 295 (440)
T ss_dssp TTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSS
T ss_pred hhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCC
Confidence 32 222 347777777777775444333 45566777777777654
No 294
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.82 E-value=6.4e-20 Score=206.90 Aligned_cols=174 Identities=24% Similarity=0.307 Sum_probs=153.4
Q ss_pred CCCCCceeEeeC-----------CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecc
Q 007107 71 CGESWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLA 137 (618)
Q Consensus 71 c~~~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~ 137 (618)
|.|.++.|.|.. .+++.|+|++|++++..+..|.++++|++|+|++|.+++..|..+. ++|++|+|+
T Consensus 2 C~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 81 (680)
T 1ziw_A 2 CTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQ 81 (680)
T ss_dssp --CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECC
T ss_pred ceeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECC
Confidence 555666777753 4689999999999999888999999999999999999988887665 899999999
Q ss_pred cccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccc
Q 007107 138 SNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSL 217 (618)
Q Consensus 138 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~ 217 (618)
+|++++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..+..+++|++|+|++|++++..
T Consensus 82 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 161 (680)
T 1ziw_A 82 HNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALK 161 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBC
T ss_pred CCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccC
Confidence 99999766668999999999999999999988899999999999999999999988999999999999999999999876
Q ss_pred cc----cCCCCccEEEcccccccccCchhhh
Q 007107 218 NV----FSGLPLTTLNVANNHFSGWIPRELI 244 (618)
Q Consensus 218 ~~----~~~~~L~~L~l~~N~l~g~ip~~~~ 244 (618)
+. ....+|+.|+|++|++++..|..+.
T Consensus 162 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~ 192 (680)
T 1ziw_A 162 SEELDIFANSSLKKLELSSNQIKEFSPGCFH 192 (680)
T ss_dssp HHHHGGGTTCEESEEECTTCCCCCBCTTGGG
T ss_pred HHHhhccccccccEEECCCCcccccChhhhh
Confidence 53 2335699999999999988886553
No 295
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.82 E-value=1.9e-20 Score=203.86 Aligned_cols=161 Identities=24% Similarity=0.376 Sum_probs=106.6
Q ss_pred CCCCCCCCCCCCCC---CCcee-EeeCCCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEe
Q 007107 60 LTNWKGNEGDPCGE---SWKGV-ACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLN 135 (618)
Q Consensus 60 ~~~w~~~~~~~c~~---~w~gv-~c~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~ 135 (618)
+.+|.. +.++|.. .|.|+ .|..++++.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| .+.++|+.|+
T Consensus 33 l~~W~~-~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip-~~l~~L~~L~ 106 (571)
T 3cvr_A 33 WDKWEK-QALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP-ELPASLEYLD 106 (571)
T ss_dssp HHHHHT-TCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC-CCCTTCCEEE
T ss_pred HHHHhc-cCCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc-cccCCCCEEE
Confidence 345653 3467754 59999 7888889999999999987 666553 77888888888888 566 6667788888
Q ss_pred cccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccc
Q 007107 136 LASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTG 215 (618)
Q Consensus 136 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 215 (618)
|++|+|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|+|++
T Consensus 107 Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~ 174 (571)
T 3cvr_A 107 ACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF 174 (571)
T ss_dssp CCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC
T ss_pred ccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC
Confidence 88888876 665 554 77777777777776 444 45666666666666663 554 34566666666666665
Q ss_pred cccccCCCCccEEEcccccccccCch
Q 007107 216 SLNVFSGLPLTTLNVANNHFSGWIPR 241 (618)
Q Consensus 216 ~~~~~~~~~L~~L~l~~N~l~g~ip~ 241 (618)
.+. +. .+|+.|+|++|+|+ .+|.
T Consensus 175 lp~-l~-~~L~~L~Ls~N~L~-~lp~ 197 (571)
T 3cvr_A 175 LPE-LP-ESLEALDVSTNLLE-SLPA 197 (571)
T ss_dssp CCC-CC-TTCCEEECCSSCCS-SCCC
T ss_pred cch-hh-CCCCEEECcCCCCC-chhh
Confidence 332 22 44555555555555 4444
No 296
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=2e-19 Score=172.79 Aligned_cols=149 Identities=21% Similarity=0.254 Sum_probs=115.0
Q ss_pred CCCCCCCceeEeeCC-----------CEEEEEcCCCCCccccc-ccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceE
Q 007107 69 DPCGESWKGVACEGS-----------AVVSIDISGLGLSGTMG-YLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSL 134 (618)
Q Consensus 69 ~~c~~~w~gv~c~~~-----------~v~~l~l~~~~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L 134 (618)
..|.|.|..+.|+.. .++.|+|++|+|++..+ ..|..+++|++|+|++|+|++..+..+. ++|++|
T Consensus 7 ~~C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 86 (220)
T 2v70_A 7 EKCRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEI 86 (220)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCCEECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEE
Confidence 456667888888642 35678888888887754 4577888888888888888866665554 788888
Q ss_pred ecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeecccccc
Q 007107 135 NLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVT 214 (618)
Q Consensus 135 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 214 (618)
+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|.++
T Consensus 87 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 87 LLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp ECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred ECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 88888888777777888888888888888888877888888888888888888888777788888888888888888887
Q ss_pred ccc
Q 007107 215 GSL 217 (618)
Q Consensus 215 ~~~ 217 (618)
+..
T Consensus 167 c~c 169 (220)
T 2v70_A 167 CNC 169 (220)
T ss_dssp CSG
T ss_pred CCC
Confidence 643
No 297
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.81 E-value=2.5e-20 Score=204.70 Aligned_cols=184 Identities=20% Similarity=0.231 Sum_probs=157.8
Q ss_pred CCceeEeeC-------------CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEeccc
Q 007107 74 SWKGVACEG-------------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLAS 138 (618)
Q Consensus 74 ~w~gv~c~~-------------~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~ 138 (618)
.|.|+ |+. ..++.|+|++|++++..|..|.++++|++|+|++|++++..|..+. ++|++|+|++
T Consensus 5 ~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~ 83 (549)
T 2z81_A 5 DASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSD 83 (549)
T ss_dssp CTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred CCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCC
Confidence 78887 753 3699999999999999999999999999999999999988877776 8999999999
Q ss_pred ccccccCCcccccCCCccEEEeecCCCCCc-hhhhhcCCCCCCeEEcccCcCCCCCC-CCcccCCCcCeeeecccccccc
Q 007107 139 NNFSGNLPYSIASMVSLSYLNVSRNSLTQS-IGDIFGNLAGLATLDLSFNNFSGDLP-NSFISLSNISSLYLQNNQVTGS 216 (618)
Q Consensus 139 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~ 216 (618)
|++++..|..|+++++|++|+|++|++++. +|..|+++++|+.|+|++|++.+.+| ..|..+++|++|+|++|++++.
T Consensus 84 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 163 (549)
T 2z81_A 84 NHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNY 163 (549)
T ss_dssp SCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEE
T ss_pred CccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccccc
Confidence 999988888899999999999999999973 67789999999999999999555665 6899999999999999999986
Q ss_pred ccc-cCC-CCccEEEcccccccccCchh----hhcccchhccCCcCCCC
Q 007107 217 LNV-FSG-LPLTTLNVANNHFSGWIPRE----LISIRTFIYDGNSFDNG 259 (618)
Q Consensus 217 ~~~-~~~-~~L~~L~l~~N~l~g~ip~~----~~~l~~l~~~~N~~~~~ 259 (618)
++. +.. .+|+.|++++|.+. .+|.. +.+|+.|++++|.+...
T Consensus 164 ~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~ 211 (549)
T 2z81_A 164 QSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARF 211 (549)
T ss_dssp CTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTC
T ss_pred ChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccc
Confidence 654 333 35999999999986 55543 56888999999988764
No 298
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.81 E-value=6.4e-20 Score=196.44 Aligned_cols=178 Identities=22% Similarity=0.229 Sum_probs=115.0
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEe
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 160 (618)
.+++.|+|++|+|++..+..|.++++|++|+|++|+|++..+..+. ++|++|+|++|+|+...+..|.++++|++|+|
T Consensus 99 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 178 (452)
T 3zyi_A 99 HHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDL 178 (452)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeC
Confidence 5789999999999999889999999999999999999966665454 89999999999998666666666666666666
Q ss_pred ecC-CCCCchhhhhcCCCCCCeEEcccCcCC----------------------CCCCCCcccCCCcCeeeeccccccccc
Q 007107 161 SRN-SLTQSIGDIFGNLAGLATLDLSFNNFS----------------------GDLPNSFISLSNISSLYLQNNQVTGSL 217 (618)
Q Consensus 161 ~~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~----------------------g~~p~~~~~l~~L~~L~l~~N~l~~~~ 217 (618)
++| .++...+..|.++++|++|+|++|+|+ +..|..|..+++|+.|+|++|+|++..
T Consensus 179 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 258 (452)
T 3zyi_A 179 GELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIE 258 (452)
T ss_dssp CCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEEC
T ss_pred CCCCCccccChhhccCCCCCCEEECCCCcccccccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceEC
Confidence 663 333222334555555555555555555 444444445555555555555554433
Q ss_pred cc-cCC-CCccEEEcccccccccCchh---hhcccchhccCCcCCCCC
Q 007107 218 NV-FSG-LPLTTLNVANNHFSGWIPRE---LISIRTFIYDGNSFDNGP 260 (618)
Q Consensus 218 ~~-~~~-~~L~~L~l~~N~l~g~ip~~---~~~l~~l~~~~N~~~~~~ 260 (618)
+. +.. .+|+.|+|++|+|++..+.. +.+|+.|++.+|+|.|.+
T Consensus 259 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 259 RNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECST
T ss_pred HHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCC
Confidence 32 222 23666666666666443332 244555666666666653
No 299
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.81 E-value=2.1e-20 Score=201.61 Aligned_cols=167 Identities=20% Similarity=0.172 Sum_probs=115.8
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeecC
Q 007107 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRN 163 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 163 (618)
+++.|+|++|.+++..| +..+++|++|+|++|.|++..+. ++|+.|+|++|+|++..+. .+++|+.|+|++|
T Consensus 59 ~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~---~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N 130 (487)
T 3oja_A 59 KLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG---PSIETLHAANNNISRVSCS---RGQGKKNIYLANN 130 (487)
T ss_dssp TCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC---TTCCEEECCSSCCCCEEEC---CCSSCEEEECCSS
T ss_pred CCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC---CCcCEEECcCCcCCCCCcc---ccCCCCEEECCCC
Confidence 44444444444444333 44444444444444444432211 4555555555555544332 4578889999999
Q ss_pred CCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcc-cCCCcCeeeeccccccccccccCCCCccEEEcccccccccCch-
Q 007107 164 SLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFI-SLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPR- 241 (618)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip~- 241 (618)
++++..|..|+.+++|+.|+|++|.|++.+|..+. .+++|++|+|++|.|++..+.....+|+.|+|++|.|++..|.
T Consensus 131 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 210 (487)
T 3oja_A 131 KITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFMGPEF 210 (487)
T ss_dssp CCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCEECGGG
T ss_pred CCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccccCCCCCEEECCCCCCCCCCHhH
Confidence 99988888888899999999999999988888776 7889999999999998876655566799999999999975443
Q ss_pred -hhhcccchhccCCcCCC
Q 007107 242 -ELISIRTFIYDGNSFDN 258 (618)
Q Consensus 242 -~~~~l~~l~~~~N~~~~ 258 (618)
.+.+|+.|++++|.+..
T Consensus 211 ~~l~~L~~L~Ls~N~l~~ 228 (487)
T 3oja_A 211 QSAAGVTWISLRNNKLVL 228 (487)
T ss_dssp GGGTTCSEEECTTSCCCE
T ss_pred cCCCCccEEEecCCcCcc
Confidence 23567788888888874
No 300
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.81 E-value=5.4e-20 Score=204.62 Aligned_cols=189 Identities=23% Similarity=0.213 Sum_probs=160.7
Q ss_pred CCCCCC--CceeEeeC-----------CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcce
Q 007107 69 DPCGES--WKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTS 133 (618)
Q Consensus 69 ~~c~~~--w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~ 133 (618)
+||.|. -..|.|.. .+++.|+|++|++++..+..|.++++|++|+|++|++++..|..+. ++|++
T Consensus 5 ~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~ 84 (606)
T 3vq2_A 5 NPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSN 84 (606)
T ss_dssp -CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCE
Confidence 456432 23577853 4689999999999999999999999999999999999988887775 89999
Q ss_pred EecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCC-CCCCCcccCCCcCeeeecccc
Q 007107 134 LNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSG-DLPNSFISLSNISSLYLQNNQ 212 (618)
Q Consensus 134 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~L~l~~N~ 212 (618)
|+|++|++++..|..|+++++|++|+|++|++++..+..|+++++|++|+|++|++++ .+|..|+++++|++|+|++|+
T Consensus 85 L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~ 164 (606)
T 3vq2_A 85 LILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNY 164 (606)
T ss_dssp EECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSC
T ss_pred eECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCc
Confidence 9999999999889999999999999999999999888899999999999999999986 679999999999999999999
Q ss_pred ccccccccC-CC-C----ccEEEcccccccccCchhhh--cccchhccCCcCC
Q 007107 213 VTGSLNVFS-GL-P----LTTLNVANNHFSGWIPRELI--SIRTFIYDGNSFD 257 (618)
Q Consensus 213 l~~~~~~~~-~~-~----L~~L~l~~N~l~g~ip~~~~--~l~~l~~~~N~~~ 257 (618)
+++..+... .. + +..|++++|.+++..+..+. +|+.|++.+|.+.
T Consensus 165 l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~ 217 (606)
T 3vq2_A 165 IQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNS 217 (606)
T ss_dssp CCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSC
T ss_pred ceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCccc
Confidence 998655322 21 1 55899999999866555443 6788888888764
No 301
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.81 E-value=8e-20 Score=191.78 Aligned_cols=172 Identities=22% Similarity=0.232 Sum_probs=140.7
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEe
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 160 (618)
.+++.|+++++.+....+..+..+++|++|+|++|.+++..+..+. ++|++|+|++|++++..|..++++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 3578899999999877667789999999999999999977766665 89999999999999888889999999999999
Q ss_pred ecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCCccEEEccccccccc-C
Q 007107 161 SRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGW-I 239 (618)
Q Consensus 161 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~-i 239 (618)
++|+++...+..|.++++|++|+|++|++++..|..|..+++|++|+|++|++++.. .....+|+.|++++|.+++. .
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~l~~L~~L~l~~n~l~~~~~ 203 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD-LSLIPSLFHANVSYNLLSTLAI 203 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC-GGGCTTCSEEECCSSCCSEEEC
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc-cccccccceeecccccccccCC
Confidence 999999776677899999999999999999888888999999999999999998742 22234567777777766642 2
Q ss_pred chhhhcccchhccCCcCCC
Q 007107 240 PRELISIRTFIYDGNSFDN 258 (618)
Q Consensus 240 p~~~~~l~~l~~~~N~~~~ 258 (618)
| .+++.|++.+|.+..
T Consensus 204 ~---~~L~~L~l~~n~l~~ 219 (390)
T 3o6n_A 204 P---IAVEELDASHNSINV 219 (390)
T ss_dssp C---SSCSEEECCSSCCCE
T ss_pred C---CcceEEECCCCeeee
Confidence 2 245556666665543
No 302
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=2.1e-19 Score=173.82 Aligned_cols=150 Identities=22% Similarity=0.254 Sum_probs=132.0
Q ss_pred CEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcC
Q 007107 110 RKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNF 189 (618)
Q Consensus 110 ~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 189 (618)
+.++.++|+++ .+|..++++|+.|+|++|+|++..|..|..+++|++|+|++|+|+...+..|..+++|+.|+|++|+|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l 100 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQL 100 (229)
T ss_dssp TEEECTTSCCS-SCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CEeEccCCCcC-ccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcC
Confidence 46788888887 78888899999999999999999999999999999999999999988888899999999999999999
Q ss_pred CCCCCCCcccCCCcCeeeeccccccccccccCC-CCccEEEcccccccccCchhh---hcccchhccCCcCCCCC
Q 007107 190 SGDLPNSFISLSNISSLYLQNNQVTGSLNVFSG-LPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNGP 260 (618)
Q Consensus 190 ~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~l~~N~l~g~ip~~~---~~l~~l~~~~N~~~~~~ 260 (618)
++..+..|..+++|++|+|++|+|+..+..+.. .+|+.|+|++|+|++..+..+ .+|+.|++.+|+|.|..
T Consensus 101 ~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 101 TVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred CccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 977777789999999999999999965544433 469999999999996655444 56788999999999864
No 303
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.80 E-value=2.3e-20 Score=208.25 Aligned_cols=175 Identities=21% Similarity=0.297 Sum_probs=158.2
Q ss_pred CCCEEEEEcCCCCCccc-----------------cccccc--CCCCCCEEeecCCCCCCCCCCCCC--CCcceEeccccc
Q 007107 82 GSAVVSIDISGLGLSGT-----------------MGYLLS--DLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNN 140 (618)
Q Consensus 82 ~~~v~~l~l~~~~l~~~-----------------~~~~l~--~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~ 140 (618)
-.+++.|+|++|.++|. +|..++ ++++|++|+|++|++.|.+|..+. ++|++|+|++|+
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 36899999999999996 999999 999999999999999999998887 899999999999
Q ss_pred -ccc-cCCcccccC------CCccEEEeecCCCCCchhh--hhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeecc
Q 007107 141 -FSG-NLPYSIASM------VSLSYLNVSRNSLTQSIGD--IFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQN 210 (618)
Q Consensus 141 -l~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 210 (618)
++| .+|..++++ ++|++|+|++|+++ .+|. .|+++++|+.|+|++|+++|.+| .+..+++|++|+|++
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~ 362 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAY 362 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCC
Confidence 999 899999887 99999999999999 8888 99999999999999999999999 999999999999999
Q ss_pred ccccccccccCC-CC-ccEEEcccccccccCchhhh-----cccchhccCCcCCCC
Q 007107 211 NQVTGSLNVFSG-LP-LTTLNVANNHFSGWIPRELI-----SIRTFIYDGNSFDNG 259 (618)
Q Consensus 211 N~l~~~~~~~~~-~~-L~~L~l~~N~l~g~ip~~~~-----~l~~l~~~~N~~~~~ 259 (618)
|+++..+..+.. .+ |+.|+|++|+++ .+|..+. +|+.|++++|.+...
T Consensus 363 N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~ 417 (636)
T 4eco_A 363 NQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSV 417 (636)
T ss_dssp SEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTT
T ss_pred CccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCc
Confidence 999954444333 45 999999999999 8887653 678899999988753
No 304
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=1.9e-19 Score=172.99 Aligned_cols=150 Identities=22% Similarity=0.267 Sum_probs=132.9
Q ss_pred CEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcC
Q 007107 110 RKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNF 189 (618)
Q Consensus 110 ~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 189 (618)
+.+++++|.++ .+|..++++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 92 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 92 (220)
T ss_dssp TEEECTTSCCS-SCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCC
T ss_pred CEEEcCCCCcC-cCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcC
Confidence 57899999999 78888889999999999999988888999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccCCCcCeeeeccccccccccc-cCC-CCccEEEcccccccccCchhh---hcccchhccCCcCCCCC
Q 007107 190 SGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNGP 260 (618)
Q Consensus 190 ~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~l~~N~l~g~ip~~~---~~l~~l~~~~N~~~~~~ 260 (618)
++..+..|..+++|++|+|++|+|++..+. +.. .+|+.|+|++|+|++..+..+ .+|+.|++.+|+|.|..
T Consensus 93 ~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 93 TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 965556678999999999999999997654 433 469999999999997776655 56778999999999853
No 305
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.80 E-value=2.8e-20 Score=200.61 Aligned_cols=170 Identities=17% Similarity=0.181 Sum_probs=147.6
Q ss_pred CCCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEee
Q 007107 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (618)
Q Consensus 82 ~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (618)
...++.|+|++|.|++..+ .++|+.|+|++|.|++..+. ..++|+.|+|++|+|++..|..++.+++|++|+|+
T Consensus 79 l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~~N~l~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 152 (487)
T 3oja_A 79 LSTLRTLDLNNNYVQELLV-----GPSIETLHAANNNISRVSCS-RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLK 152 (487)
T ss_dssp CTTCCEEECCSSEEEEEEE-----CTTCCEEECCSSCCCCEEEC-CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECT
T ss_pred CCCCCEEEecCCcCCCCCC-----CCCcCEEECcCCcCCCCCcc-ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECC
Confidence 3589999999999987543 38999999999999976654 44899999999999999999999999999999999
Q ss_pred cCCCCCchhhhhc-CCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCC-CCccEEEcccccccccC
Q 007107 162 RNSLTQSIGDIFG-NLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSG-LPLTTLNVANNHFSGWI 239 (618)
Q Consensus 162 ~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~l~~N~l~g~i 239 (618)
+|+|++.+|..+. .+++|+.|+|++|.|++. |. +..+++|++|+|++|+|++.++.+.. .+|+.|+|++|.|++ +
T Consensus 153 ~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-l 229 (487)
T 3oja_A 153 LNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-I 229 (487)
T ss_dssp TSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-E
T ss_pred CCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-c
Confidence 9999999998886 799999999999999965 33 34689999999999999998776554 459999999999996 6
Q ss_pred chhh---hcccchhccCCcCCCCC
Q 007107 240 PREL---ISIRTFIYDGNSFDNGP 260 (618)
Q Consensus 240 p~~~---~~l~~l~~~~N~~~~~~ 260 (618)
|..+ .+|..|++.+|++.|+.
T Consensus 230 p~~l~~l~~L~~L~l~~N~l~c~~ 253 (487)
T 3oja_A 230 EKALRFSQNLEHFDLRGNGFHCGT 253 (487)
T ss_dssp CTTCCCCTTCCEEECTTCCBCHHH
T ss_pred chhhccCCCCCEEEcCCCCCcCcc
Confidence 7655 56778999999999853
No 306
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.80 E-value=6.7e-20 Score=203.86 Aligned_cols=175 Identities=20% Similarity=0.197 Sum_probs=108.5
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCC-CCCC--CCcceEecccccccccCCcccccCCCccEEEe
Q 007107 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIP-YQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 160 (618)
+++.|+|++|.+.+ +|..+..+++|+.|+|++|++++..| ..+. ++|+.|+|++|++++..|..+.++++|++|+|
T Consensus 377 ~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 455 (606)
T 3vq2_A 377 SLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKM 455 (606)
T ss_dssp CCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEEC
T ss_pred cccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEEC
Confidence 34445555555443 33555566666666666666665555 2332 56666777777666666666666777777777
Q ss_pred ecCCCCC-chhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccc-cCC-CCccEEEcccccccc
Q 007107 161 SRNSLTQ-SIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFSG 237 (618)
Q Consensus 161 ~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~l~~N~l~g 237 (618)
++|++++ .+|..|+.+++|+.|+|++|++++..|..|..+++|++|+|++|++++.++. +.. .+|+.|+|++|+|+
T Consensus 456 ~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~- 534 (606)
T 3vq2_A 456 AGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE- 534 (606)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-
T ss_pred CCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-
Confidence 7777666 3566666677777777777777766666666777777777777777665443 222 34777777777776
Q ss_pred cCchhhh----cccchhccCCcCCCCC
Q 007107 238 WIPRELI----SIRTFIYDGNSFDNGP 260 (618)
Q Consensus 238 ~ip~~~~----~l~~l~~~~N~~~~~~ 260 (618)
.+|..+. +|+.|++.+|+|.|..
T Consensus 535 ~~p~~~~~l~~~L~~l~l~~N~~~c~c 561 (606)
T 3vq2_A 535 TSKGILQHFPKSLAFFNLTNNSVACIC 561 (606)
T ss_dssp CEESCGGGSCTTCCEEECCSCCCCCSS
T ss_pred ccCHhHhhhcccCcEEEccCCCcccCC
Confidence 5555442 3556667777776643
No 307
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.80 E-value=1.3e-19 Score=201.65 Aligned_cols=177 Identities=23% Similarity=0.200 Sum_probs=140.1
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCC-CC--CCcceEecccccccccCCcccccCCCccEEE
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQ-LP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~-~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (618)
.+++.|+|++|.+.+..|..+..+++|+.|+|++|.+++..|.. +. ++|+.|+|++|++++..|..+..+++|++|+
T Consensus 376 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 455 (606)
T 3t6q_A 376 SHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLN 455 (606)
T ss_dssp TTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEE
Confidence 46778888888888877888888888888888888888776644 32 7888888888888888888888888888888
Q ss_pred eecCCCCCc---hhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccc-cCC-CCccEEEccccc
Q 007107 160 VSRNSLTQS---IGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNH 234 (618)
Q Consensus 160 L~~N~l~~~---~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~l~~N~ 234 (618)
|++|++++. .+..+..+++|+.|+|++|++++..|..|..+++|++|+|++|++++.++. +.. ..| .|+|++|+
T Consensus 456 L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~ 534 (606)
T 3t6q_A 456 LQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNH 534 (606)
T ss_dssp CTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSC
T ss_pred CCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCc
Confidence 888888763 235688888888888888888887788888888888889988888886653 333 347 88899999
Q ss_pred ccccCchhh---hcccchhccCCcCCCCC
Q 007107 235 FSGWIPREL---ISIRTFIYDGNSFDNGP 260 (618)
Q Consensus 235 l~g~ip~~~---~~l~~l~~~~N~~~~~~ 260 (618)
+++.+|..+ .+++.|++.+|+|.|..
T Consensus 535 l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 535 ISIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp CCCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred ccccCHhhcccCCCCCEEeCCCCCccccC
Confidence 987777654 56678888999988854
No 308
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.80 E-value=2.2e-19 Score=181.90 Aligned_cols=171 Identities=18% Similarity=0.292 Sum_probs=142.0
Q ss_pred CCCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEee
Q 007107 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (618)
Q Consensus 82 ~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (618)
-.+++.|+|++|++.+..+ +..+++|++|+|++|.+++.....-.++|+.|+|++|++++. + .+..+++|++|+|+
T Consensus 62 l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~ 137 (308)
T 1h6u_A 62 LNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLD 137 (308)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCCGGGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECC
T ss_pred cCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCchhhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECC
Confidence 4679999999999987655 999999999999999998653333338999999999999964 4 38999999999999
Q ss_pred cCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCCccEEEcccccccccCc-
Q 007107 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIP- 240 (618)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip- 240 (618)
+|++++..+ +..+++|+.|+|++|++++ ++. +..+++|+.|+|++|++++..+.....+|+.|+|++|++++..|
T Consensus 138 ~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~~~l 213 (308)
T 1h6u_A 138 LNQITNISP--LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDVSPL 213 (308)
T ss_dssp SSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCCBCGGG
T ss_pred CCccCcCcc--ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccCccccc
Confidence 999997765 8899999999999999995 444 88999999999999999987664445569999999999997554
Q ss_pred hhhhcccchhccCCcCCCCC
Q 007107 241 RELISIRTFIYDGNSFDNGP 260 (618)
Q Consensus 241 ~~~~~l~~l~~~~N~~~~~~ 260 (618)
..+.+|+.|++.+|++.+.+
T Consensus 214 ~~l~~L~~L~l~~N~i~~~~ 233 (308)
T 1h6u_A 214 ANTSNLFIVTLTNQTITNQP 233 (308)
T ss_dssp TTCTTCCEEEEEEEEEECCC
T ss_pred cCCCCCCEEEccCCeeecCC
Confidence 34567788999999997744
No 309
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.80 E-value=3.6e-19 Score=182.56 Aligned_cols=176 Identities=21% Similarity=0.234 Sum_probs=128.9
Q ss_pred CCCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEee
Q 007107 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (618)
Q Consensus 82 ~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (618)
-.+++.|+|++|++++..|..|.++++|++|+|++|+++ .+|..+.++|++|+|++|++++..+..+.++++|++|+|+
T Consensus 77 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~ 155 (332)
T 2ft3_A 77 LQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMG 155 (332)
T ss_dssp CTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCCTTCCEEECCSSCCCCCCSGGGSSCSSCCEEECC
T ss_pred CCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCccccccCCEEECCCCccCccCHhHhCCCccCCEEECC
Confidence 357999999999999999999999999999999999999 7787778999999999999997777789999999999999
Q ss_pred cCCCC--CchhhhhcCC--------------------CCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccc
Q 007107 162 RNSLT--QSIGDIFGNL--------------------AGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV 219 (618)
Q Consensus 162 ~N~l~--~~~p~~~~~l--------------------~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 219 (618)
+|+++ +..+..|..+ ++|+.|+|++|++++..|..|..+++|++|+|++|+|++..+.
T Consensus 156 ~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 235 (332)
T 2ft3_A 156 GNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENG 235 (332)
T ss_dssp SCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTT
T ss_pred CCccccCCCCcccccCCccCEEECcCCCCCccCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChh
Confidence 99996 3666776665 3455555555555544445556666666666666666654432
Q ss_pred -cC-CCCccEEEcccccccccCchhh---hcccchhccCCcCCCC
Q 007107 220 -FS-GLPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNG 259 (618)
Q Consensus 220 -~~-~~~L~~L~l~~N~l~g~ip~~~---~~l~~l~~~~N~~~~~ 259 (618)
+. ..+|+.|+|++|+++ .+|..+ .+|+.|++.+|++...
T Consensus 236 ~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~ 279 (332)
T 2ft3_A 236 SLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKV 279 (332)
T ss_dssp GGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBC
T ss_pred HhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCcc
Confidence 22 234666666666666 555544 3344556666665543
No 310
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.80 E-value=1.1e-19 Score=201.56 Aligned_cols=173 Identities=21% Similarity=0.262 Sum_probs=106.6
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEe
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 160 (618)
.+++.|+|++|.+++..|..|+++++|++|+|++|.|++..+..+. ++|++|+|++|+|++..|..|+.+++|++|+|
T Consensus 99 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 178 (597)
T 3oja_B 99 HTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQL 178 (597)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEEC
Confidence 3566777777777776666667777777777777777643333222 66777777777777666666666666666666
Q ss_pred ecCCCCCchh-----------------------------------------------------------hhhcCCCCCCe
Q 007107 161 SRNSLTQSIG-----------------------------------------------------------DIFGNLAGLAT 181 (618)
Q Consensus 161 ~~N~l~~~~p-----------------------------------------------------------~~~~~l~~L~~ 181 (618)
++|++++..+ ..++.+++|+.
T Consensus 179 ~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~~~~l~~l~~L~~ 258 (597)
T 3oja_B 179 SSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVE 258 (597)
T ss_dssp TTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCCCCGGGGGCTTCSE
T ss_pred cCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCCCEEECCCCCCCCChhhccCCCCCE
Confidence 6666654321 23455667777
Q ss_pred EEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCC-CCccEEEcccccccccCchhh---hcccchhccCCcC
Q 007107 182 LDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSG-LPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSF 256 (618)
Q Consensus 182 L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~l~~N~l~g~ip~~~---~~l~~l~~~~N~~ 256 (618)
|+|++|.|++.+|..|..+++|+.|+|++|+|++....... .+|+.|+|++|.++ .+|..+ .+|+.|++.+|.+
T Consensus 259 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l 336 (597)
T 3oja_B 259 VDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSI 336 (597)
T ss_dssp EECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCC
T ss_pred EECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCC
Confidence 77777777766677777777777777777777764433322 34666666666666 344332 3344444444444
No 311
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.80 E-value=1.2e-19 Score=209.36 Aligned_cols=186 Identities=20% Similarity=0.146 Sum_probs=158.8
Q ss_pred CCCceeEeeCCCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCC-CCCCC--CCcceEecccccccccCCccc
Q 007107 73 ESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTI-PYQLP--PNLTSLNLASNNFSGNLPYSI 149 (618)
Q Consensus 73 ~~w~gv~c~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~-p~~~~--~~L~~L~L~~N~l~~~~p~~~ 149 (618)
+.|..|.+...+++.|||++|.+++..+..|.++++|++|+|++|.+.+.+ |..+. ++|++|+|++|++++..|..|
T Consensus 14 ~~L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~ 93 (844)
T 3j0a_A 14 CNLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAF 93 (844)
T ss_dssp CCSSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSS
T ss_pred CCCCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHc
Confidence 357777765578999999999999999999999999999999999877777 55555 899999999999999999999
Q ss_pred ccCCCccEEEeecCCCCCchhhh--hcCCCCCCeEEcccCcCCCCCC-CCcccCCCcCeeeecccccccccccc-CC---
Q 007107 150 ASMVSLSYLNVSRNSLTQSIGDI--FGNLAGLATLDLSFNNFSGDLP-NSFISLSNISSLYLQNNQVTGSLNVF-SG--- 222 (618)
Q Consensus 150 ~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~-~~--- 222 (618)
+++++|++|+|++|++++.+|.. |+++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..+.. ..
T Consensus 94 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~ 173 (844)
T 3j0a_A 94 QGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQG 173 (844)
T ss_dssp CSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHH
T ss_pred cCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccC
Confidence 99999999999999999877665 9999999999999999997655 57899999999999999998865432 21
Q ss_pred CCccEEEcccccccccCchhhhc---------ccchhccCCcCCC
Q 007107 223 LPLTTLNVANNHFSGWIPRELIS---------IRTFIYDGNSFDN 258 (618)
Q Consensus 223 ~~L~~L~l~~N~l~g~ip~~~~~---------l~~l~~~~N~~~~ 258 (618)
.+|+.|+|++|.+++.+|..+.. |+.|++++|.+..
T Consensus 174 ~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~ 218 (844)
T 3j0a_A 174 KTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTV 218 (844)
T ss_dssp CSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSST
T ss_pred CccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCch
Confidence 56999999999999888765433 6778888886653
No 312
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=9.4e-20 Score=189.04 Aligned_cols=168 Identities=23% Similarity=0.229 Sum_probs=144.0
Q ss_pred CCCCCCCceeEeeCC-----------CEEEEEcCCCCCccccccccc-CCCCCCEEeecCCCCCCCCCCCCC--CCcceE
Q 007107 69 DPCGESWKGVACEGS-----------AVVSIDISGLGLSGTMGYLLS-DLLSLRKFDLSGNSIHDTIPYQLP--PNLTSL 134 (618)
Q Consensus 69 ~~c~~~w~gv~c~~~-----------~v~~l~l~~~~l~~~~~~~l~-~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L 134 (618)
..|.|.+..+.|... .++.|+|++|+|++..+..+. ++++|+.|+|++|+|++..|..+. ++|++|
T Consensus 14 ~~C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 93 (361)
T 2xot_A 14 ANCLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYL 93 (361)
T ss_dssp TTCEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCCEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEE
Confidence 447778999999742 477899999999998888888 999999999999999977776665 899999
Q ss_pred ecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCC-c---ccCCCcCeeeecc
Q 007107 135 NLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNS-F---ISLSNISSLYLQN 210 (618)
Q Consensus 135 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~---~~l~~L~~L~l~~ 210 (618)
+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++ +|.. | ..+++|+.|+|++
T Consensus 94 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~~~~l~~L~~L~L~~ 172 (361)
T 2xot_A 94 DLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPVELIKDGNKLPKLMLLDLSS 172 (361)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-CCGGGTC----CTTCCEEECCS
T ss_pred ECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-eCHHHhcCcccCCcCCEEECCC
Confidence 999999998888889999999999999999999999999999999999999999995 5554 4 5799999999999
Q ss_pred ccccccccc-cCCC---CccEEEcccccccc
Q 007107 211 NQVTGSLNV-FSGL---PLTTLNVANNHFSG 237 (618)
Q Consensus 211 N~l~~~~~~-~~~~---~L~~L~l~~N~l~g 237 (618)
|+|++.... +... .++.|+|++|.+.-
T Consensus 173 N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 173 NKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp SCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred CCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 999975532 2222 25889999999973
No 313
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.79 E-value=2.5e-19 Score=199.22 Aligned_cols=181 Identities=19% Similarity=0.135 Sum_probs=157.0
Q ss_pred CceeEeeC-----------CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccc
Q 007107 75 WKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNF 141 (618)
Q Consensus 75 w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l 141 (618)
+..+.|.. ..++.|+|++|.|++..|..|.++++|++|+|++|++++..|..+. ++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 56788863 3689999999999999999999999999999999999988887776 8999999999999
Q ss_pred cccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccc-c
Q 007107 142 SGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-F 220 (618)
Q Consensus 142 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~ 220 (618)
++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..+..+..+++|++|+|++|++++..+. +
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 173 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDM 173 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHH
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhh
Confidence 999999999999999999999999998889999999999999999999974444555699999999999999986543 3
Q ss_pred C-CCCcc--EEEcccccccccCchhhh--cccchhccCCc
Q 007107 221 S-GLPLT--TLNVANNHFSGWIPRELI--SIRTFIYDGNS 255 (618)
Q Consensus 221 ~-~~~L~--~L~l~~N~l~g~ip~~~~--~l~~l~~~~N~ 255 (618)
. ..+|+ .|++++|.+++..|..+. +++.|++.+|.
T Consensus 174 ~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~ 213 (606)
T 3t6q_A 174 SSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQ 213 (606)
T ss_dssp HTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCS
T ss_pred hhhcccceeEEecCCCccCccChhHhhhccccccccCCch
Confidence 2 33477 899999999988887664 46677777764
No 314
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.79 E-value=4.4e-19 Score=199.99 Aligned_cols=178 Identities=20% Similarity=0.239 Sum_probs=135.4
Q ss_pred CCEEEEEcCCCCCccccc-ccccCCCCCCEEeecCCCCCC--------------------------CCCCCCC--CCcce
Q 007107 83 SAVVSIDISGLGLSGTMG-YLLSDLLSLRKFDLSGNSIHD--------------------------TIPYQLP--PNLTS 133 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~-~~l~~l~~L~~L~L~~N~l~~--------------------------~~p~~~~--~~L~~ 133 (618)
.+++.|+|++|.+.+.+| ..+..+++|++|+|++|++++ .+|..+. ++|+.
T Consensus 405 ~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~ 484 (680)
T 1ziw_A 405 GHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTI 484 (680)
T ss_dssp TTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCE
T ss_pred CCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCE
Confidence 467778888888877665 567777777777777777653 3444443 67888
Q ss_pred EecccccccccCCcccccCCCccEEEeecCCCCCchh--------hhhcCCCCCCeEEcccCcCCCCCC-CCcccCCCcC
Q 007107 134 LNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIG--------DIFGNLAGLATLDLSFNNFSGDLP-NSFISLSNIS 204 (618)
Q Consensus 134 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p--------~~~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~ 204 (618)
|+|++|+|++..|..+.++++|++|+|++|++++..+ ..|.++++|+.|+|++|+|+ .+| ..|..+++|+
T Consensus 485 L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~ 563 (680)
T 1ziw_A 485 LDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDLFELK 563 (680)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCC
T ss_pred EECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC-CCCHHHcccccCcc
Confidence 8888888887777778888888888888888875432 23677888888888888888 455 4688999999
Q ss_pred eeeecccccccccccc-CC-CCccEEEcccccccccCch----hhhcccchhccCCcCCCCCC
Q 007107 205 SLYLQNNQVTGSLNVF-SG-LPLTTLNVANNHFSGWIPR----ELISIRTFIYDGNSFDNGPA 261 (618)
Q Consensus 205 ~L~l~~N~l~~~~~~~-~~-~~L~~L~l~~N~l~g~ip~----~~~~l~~l~~~~N~~~~~~~ 261 (618)
+|+|++|+|++.++.. .. .+|+.|+|++|+|++..|. .+.+++.+++.+|||.|.+.
T Consensus 564 ~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 564 IIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred eeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 9999999999866553 23 4699999999999987776 45678899999999999753
No 315
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.79 E-value=1.8e-19 Score=189.05 Aligned_cols=174 Identities=21% Similarity=0.300 Sum_probs=112.3
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCC-C--CCCcceEecccccccccCCcccccCCCccEEE
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQ-L--PPNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~-~--~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (618)
.+++.|+|++|++.+..|..|.++++|++|+|++|.++. +|.. + .++|++|+|++|++++..|..+..+++|++|+
T Consensus 93 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 171 (390)
T 3o6n_A 93 HTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSS-LPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQ 171 (390)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEE
T ss_pred CCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCc-CCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEE
Confidence 356666777666666666666666666666666666663 3332 2 25666666666666666566666666666666
Q ss_pred eecCCCCCchh-----------------------------------------------------------hhhcCCCCCC
Q 007107 160 VSRNSLTQSIG-----------------------------------------------------------DIFGNLAGLA 180 (618)
Q Consensus 160 L~~N~l~~~~p-----------------------------------------------------------~~~~~l~~L~ 180 (618)
|++|++++... ..+..+++|+
T Consensus 172 l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~~~l~~l~~L~ 251 (390)
T 3o6n_A 172 LSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLV 251 (390)
T ss_dssp CCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCCGGGGGCTTCS
T ss_pred CCCCcCCccccccccccceeecccccccccCCCCcceEEECCCCeeeeccccccccccEEECCCCCCcccHHHcCCCCcc
Confidence 66666553211 2345567778
Q ss_pred eEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCC-CCccEEEcccccccccCchh---hhcccchhccCCcC
Q 007107 181 TLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSG-LPLTTLNVANNHFSGWIPRE---LISIRTFIYDGNSF 256 (618)
Q Consensus 181 ~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~l~~N~l~g~ip~~---~~~l~~l~~~~N~~ 256 (618)
.|+|++|.+++..|..|..+++|++|+|++|++++....... .+|+.|+|++|+++ .+|.. +.+|+.|++.+|++
T Consensus 252 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i 330 (390)
T 3o6n_A 252 EVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSI 330 (390)
T ss_dssp EEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCC
T ss_pred EEECCCCcCCCcChhHccccccCCEEECCCCcCcccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcc
Confidence 888888888777777777888888888888888775443332 35777777777777 44543 35566666777766
Q ss_pred CC
Q 007107 257 DN 258 (618)
Q Consensus 257 ~~ 258 (618)
..
T Consensus 331 ~~ 332 (390)
T 3o6n_A 331 VT 332 (390)
T ss_dssp CC
T ss_pred ce
Confidence 54
No 316
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.79 E-value=1e-18 Score=173.60 Aligned_cols=156 Identities=21% Similarity=0.260 Sum_probs=139.5
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEe
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 160 (618)
.+++.|+|++|++++..+..|..+++|++|+|++|++++..+..+. ++|++|+|++|++++..+..|..+++|++|+|
T Consensus 61 ~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 140 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSL 140 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEEC
Confidence 5799999999999987777889999999999999999976655544 89999999999999888888999999999999
Q ss_pred ecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccc-cCC-CCccEEEccccccccc
Q 007107 161 SRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFSGW 238 (618)
Q Consensus 161 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~l~~N~l~g~ 238 (618)
++|++++..+..|..+++|+.|+|++|++++..+..|..+++|++|+|++|+|++.++. +.. .+|+.|+|++|++...
T Consensus 141 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 141 GYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred CCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 99999988888899999999999999999977677799999999999999999987654 333 4699999999999754
No 317
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.79 E-value=4.7e-19 Score=167.24 Aligned_cols=151 Identities=17% Similarity=0.273 Sum_probs=128.7
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeec
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (618)
.+++.|++++|++. .+| .+..+++|++|+|++|.++..-+..-.++|++|+|++|++++..|..++.+++|++|+|++
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~ 121 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISH 121 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCS
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecC
Confidence 46899999999998 445 6999999999999999887443333348999999999999998899999999999999999
Q ss_pred CCCCCchhhhhcCCCCCCeEEcccCc-CCCCCCCCcccCCCcCeeeeccccccccccccCCCCccEEEcccccccc
Q 007107 163 NSLTQSIGDIFGNLAGLATLDLSFNN-FSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSG 237 (618)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~-l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g 237 (618)
|++++..|..++.+++|++|+|++|+ ++ .+| .+..+++|++|++++|++++........+|+.|++++|++.+
T Consensus 122 n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 122 SAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp SBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC----
T ss_pred CccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCcccCC
Confidence 99999899999999999999999998 65 676 689999999999999999986544444569999999999864
No 318
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.79 E-value=1.5e-19 Score=187.10 Aligned_cols=155 Identities=22% Similarity=0.252 Sum_probs=128.3
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCC-cccccCCCccEEE
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLP-YSIASMVSLSYLN 159 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ 159 (618)
.+++.|+|++|++++..+..|.++++|++|+|++|++++..+..+. ++|++|+|++|++++..+ ..+.++++|++|+
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~ 155 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILR 155 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred CCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEE
Confidence 5799999999999998889999999999999999999965443243 899999999999995433 4789999999999
Q ss_pred eecC-CCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccC--CCCccEEEccccccc
Q 007107 160 VSRN-SLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFS--GLPLTTLNVANNHFS 236 (618)
Q Consensus 160 L~~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~--~~~L~~L~l~~N~l~ 236 (618)
|++| .+++..+..|.++++|+.|+|++|++++..|..+..+++|++|++++|+++.....+. ..+|+.|+|++|.++
T Consensus 156 l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~ 235 (353)
T 2z80_A 156 VGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLD 235 (353)
T ss_dssp EEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCT
T ss_pred CCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccc
Confidence 9999 4777777889999999999999999998889999999999999999988865443221 234777777777766
Q ss_pred c
Q 007107 237 G 237 (618)
Q Consensus 237 g 237 (618)
+
T Consensus 236 ~ 236 (353)
T 2z80_A 236 T 236 (353)
T ss_dssp T
T ss_pred c
Confidence 5
No 319
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.79 E-value=5e-19 Score=197.61 Aligned_cols=171 Identities=21% Similarity=0.218 Sum_probs=138.6
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEee
Q 007107 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (618)
.++.|||++|+|++..+..|.++++|++|+|++|+|++..|..|. ++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 588999999999988888999999999999999999977676665 899999999999997777889999999999999
Q ss_pred cCCCCCchhhhhcCCCCCCeEEcccCcCCC-CCCCCcccCCCcCeeeecccccccccccc-C---C--CCccEEEccccc
Q 007107 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSG-DLPNSFISLSNISSLYLQNNQVTGSLNVF-S---G--LPLTTLNVANNH 234 (618)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~---~--~~L~~L~l~~N~ 234 (618)
+|+|++..+..|+++++|++|+|++|+|++ .+|..+..+++|++|+|++|+|++..+.. . . .....++++.|.
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~ 212 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 212 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCc
Confidence 999998888889999999999999999975 46788889999999999999998865431 1 1 125578888888
Q ss_pred ccccCchhhhcc--cchhccCC
Q 007107 235 FSGWIPRELISI--RTFIYDGN 254 (618)
Q Consensus 235 l~g~ip~~~~~l--~~l~~~~N 254 (618)
++...|..+..+ ..+.+.+|
T Consensus 213 l~~i~~~~~~~~~~~~l~l~~n 234 (635)
T 4g8a_A 213 MNFIQPGAFKEIRLHKLTLRNN 234 (635)
T ss_dssp CCEECTTTTTTCEEEEEEEESC
T ss_pred ccccCcccccchhhhhhhhhcc
Confidence 886555444332 34444444
No 320
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.79 E-value=1.2e-19 Score=206.75 Aligned_cols=174 Identities=20% Similarity=0.251 Sum_probs=155.0
Q ss_pred CCCEEEEEcCCCCCcc-----------------ccccccc--CCCCCCEEeecCCCCCCCCCCCCC--CCcceEeccccc
Q 007107 82 GSAVVSIDISGLGLSG-----------------TMGYLLS--DLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNN 140 (618)
Q Consensus 82 ~~~v~~l~l~~~~l~~-----------------~~~~~l~--~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~ 140 (618)
-.+++.|+|++|+|+| .+|..++ +|++|++|+|++|++.+.+|..+. ++|+.|+|++|+
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 3689999999999999 4899988 999999999999999999998776 899999999998
Q ss_pred -ccc-cCCcccccCC-------CccEEEeecCCCCCchhh--hhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeec
Q 007107 141 -FSG-NLPYSIASMV-------SLSYLNVSRNSLTQSIGD--IFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQ 209 (618)
Q Consensus 141 -l~~-~~p~~~~~l~-------~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 209 (618)
|+| .+|..+++++ +|++|+|++|+++ .+|. .|+++++|+.|+|++|+|+ .+| .|..+++|+.|+|+
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls 603 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLD 603 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECC
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECc
Confidence 999 8998887776 9999999999999 8888 9999999999999999999 899 89999999999999
Q ss_pred cccccccccccCC-CC-ccEEEcccccccccCchhhhc-----ccchhccCCcCCCC
Q 007107 210 NNQVTGSLNVFSG-LP-LTTLNVANNHFSGWIPRELIS-----IRTFIYDGNSFDNG 259 (618)
Q Consensus 210 ~N~l~~~~~~~~~-~~-L~~L~l~~N~l~g~ip~~~~~-----l~~l~~~~N~~~~~ 259 (618)
+|+|+..+..+.. .+ |+.|+|++|+|+ .+|..+.. |+.|++++|.+...
T Consensus 604 ~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ 659 (876)
T 4ecn_A 604 YNQIEEIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSE 659 (876)
T ss_dssp SSCCSCCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTT
T ss_pred CCccccchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCc
Confidence 9999944434433 35 999999999999 88876643 78899999988753
No 321
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.79 E-value=1e-20 Score=213.38 Aligned_cols=207 Identities=23% Similarity=0.208 Sum_probs=98.9
Q ss_pred hHHHHHHHHHHHhCCCCC--CCCCCCCCCCCCCCCCCceeEeeCCCEEEEEcCCCCCcccccccccCCCCCCEEeecCCC
Q 007107 41 SSDVQALQVLYTSLNSPS--VLTNWKGNEGDPCGESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNS 118 (618)
Q Consensus 41 ~~~~~al~~~~~~~~~~~--~~~~w~~~~~~~c~~~w~gv~c~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~ 118 (618)
..++++|.+++.++.... .-..|.......+ .|.++.++..+++.|+|.+|++... +..+ |+.++|+.|.
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~~l~L~~n~~~~~-~~~~-----l~~l~Ls~~~ 202 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDSTPSG--TATNSAVSTPLTPKIELFANGKDEA-NQAL-----LQHKKLSQYS 202 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCCCccc--cCCCceecCCccceEEeeCCCCCcc-hhhH-----hhcCccCccc
Confidence 457788999987764432 3345654433333 7999999988899999888887653 2222 2233333333
Q ss_pred CCC---------CCCCCCC--CCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccC
Q 007107 119 IHD---------TIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFN 187 (618)
Q Consensus 119 l~~---------~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 187 (618)
|.+ ..|..+. ++|+.|+|++|+|. .+|..+.++++|++|+|++|+|+ .+|..|+++++|++|+|++|
T Consensus 203 i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N 280 (727)
T 4b8c_D 203 IDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHN 280 (727)
T ss_dssp -------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTS
T ss_pred ccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCC
Confidence 322 2233333 66777777777777 66666667777777777777777 66677777777777777777
Q ss_pred cCCCCCCCCcccCCCcCeeeeccccccccccccCCC-CccEEEcccccccccCchhhhccc----chhccCCcCCC
Q 007107 188 NFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGL-PLTTLNVANNHFSGWIPRELISIR----TFIYDGNSFDN 258 (618)
Q Consensus 188 ~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~L~~L~l~~N~l~g~ip~~~~~l~----~l~~~~N~~~~ 258 (618)
+|+ .+|..|+.|++|++|+|++|.|+..+..+..+ +|+.|+|++|.|+|.+|..+..+. .+++.+|.+..
T Consensus 281 ~l~-~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~ 355 (727)
T 4b8c_D 281 RLT-SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEI 355 (727)
T ss_dssp CCS-SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred cCC-ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccC
Confidence 777 66777777777777777777776444434333 477777777777777776664432 34566666643
No 322
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.79 E-value=3.1e-19 Score=196.53 Aligned_cols=174 Identities=21% Similarity=0.296 Sum_probs=111.6
Q ss_pred CEEEEEcCCCCCcccccccc-----cCCC--------------------------CCCEEeecCCCCCCCCCCCCCCCcc
Q 007107 84 AVVSIDISGLGLSGTMGYLL-----SDLL--------------------------SLRKFDLSGNSIHDTIPYQLPPNLT 132 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l-----~~l~--------------------------~L~~L~L~~N~l~~~~p~~~~~~L~ 132 (618)
.++.|++++|.+.|.+|..+ .+++ +|+.|++++|.+.........++|+
T Consensus 277 ~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~ 356 (562)
T 3a79_B 277 PVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFT 356 (562)
T ss_dssp SEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCC
T ss_pred cccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCce
Confidence 78888888888888777765 3332 3555555555554222113336777
Q ss_pred eEecccccccccCCcccccCCCccEEEeecCCCCC--chhhhhcCCCCCCeEEcccCcCCCCCCCC-cccCCCcCeeeec
Q 007107 133 SLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQ--SIGDIFGNLAGLATLDLSFNNFSGDLPNS-FISLSNISSLYLQ 209 (618)
Q Consensus 133 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~L~~L~l~ 209 (618)
+|+|++|++++.+|..+.++++|++|+|++|++++ .+|..|.++++|+.|+|++|++++.+|.. +..+++|++|+|+
T Consensus 357 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~ 436 (562)
T 3a79_B 357 FLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLS 436 (562)
T ss_dssp EEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECC
T ss_pred EEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECC
Confidence 77777777777677777777777777777777775 34556777777777777777777645543 5666777777777
Q ss_pred cccccccccccCCCCccEEEcccccccccCchhh---hcccchhccCCcCCC
Q 007107 210 NNQVTGSLNVFSGLPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDN 258 (618)
Q Consensus 210 ~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip~~~---~~l~~l~~~~N~~~~ 258 (618)
+|+|++.++.....+|+.|+|++|+|+ .+|..+ .+|+.|++++|.+..
T Consensus 437 ~n~l~~~~~~~l~~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~ 487 (562)
T 3a79_B 437 SNMLTGSVFRCLPPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS 487 (562)
T ss_dssp SSCCCGGGGSSCCTTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC
T ss_pred CCCCCcchhhhhcCcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC
Confidence 777766554433345677777777766 556543 345566666666653
No 323
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.79 E-value=1.3e-19 Score=183.99 Aligned_cols=176 Identities=20% Similarity=0.200 Sum_probs=128.4
Q ss_pred CCCEEEEEcCCCCCccccc----ccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEeccccccccc--C--Cccccc
Q 007107 82 GSAVVSIDISGLGLSGTMG----YLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGN--L--PYSIAS 151 (618)
Q Consensus 82 ~~~v~~l~l~~~~l~~~~~----~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~--~--p~~~~~ 151 (618)
..+++.|+|++|.+.+..+ ..+..+++|++|+|++|++++..|..+. ++|++|+|++|++.+. + +..+..
T Consensus 116 ~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 195 (310)
T 4glp_A 116 GLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHK 195 (310)
T ss_dssp CBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTS
T ss_pred CCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhc
Confidence 3467888888888877544 3455788888888888888877666654 7888888888887652 2 223467
Q ss_pred CCCccEEEeecCCCCCchh--h-hhcCCCCCCeEEcccCcCCCCCCCCcccC---CCcCeeeeccccccccccccCCCCc
Q 007107 152 MVSLSYLNVSRNSLTQSIG--D-IFGNLAGLATLDLSFNNFSGDLPNSFISL---SNISSLYLQNNQVTGSLNVFSGLPL 225 (618)
Q Consensus 152 l~~L~~L~L~~N~l~~~~p--~-~~~~l~~L~~L~l~~N~l~g~~p~~~~~l---~~L~~L~l~~N~l~~~~~~~~~~~L 225 (618)
+++|++|+|++|+++...+ . .++.+++|++|+|++|+|++.+|..+..+ ++|++|+|++|+|+.. |.....+|
T Consensus 196 l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~l-p~~~~~~L 274 (310)
T 4glp_A 196 FPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQV-PKGLPAKL 274 (310)
T ss_dssp SCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSC-CSCCCSCC
T ss_pred CCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCch-hhhhcCCC
Confidence 8888888888888873322 1 35677888888888888887777777766 5888888888888844 33333678
Q ss_pred cEEEcccccccc-cCchhhhcccchhccCCcCCC
Q 007107 226 TTLNVANNHFSG-WIPRELISIRTFIYDGNSFDN 258 (618)
Q Consensus 226 ~~L~l~~N~l~g-~ip~~~~~l~~l~~~~N~~~~ 258 (618)
+.|+|++|+|++ .++..+.+|+.|++++|++..
T Consensus 275 ~~L~Ls~N~l~~~~~~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 275 RVLDLSSNRLNRAPQPDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp SCEECCSCCCCSCCCTTSCCCCSCEECSSTTTSC
T ss_pred CEEECCCCcCCCCchhhhCCCccEEECcCCCCCC
Confidence 888888888887 566777788888888888764
No 324
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.78 E-value=6.2e-19 Score=180.58 Aligned_cols=167 Identities=20% Similarity=0.250 Sum_probs=77.2
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEeccccccc--ccCCcccccCCCccEEE
Q 007107 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFS--GNLPYSIASMVSLSYLN 159 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~ 159 (618)
+++.|+|++|.++. +|..+. ++|++|+|++|.+++..+..+. ++|+.|+|++|+++ +..+..+.++++|++|+
T Consensus 101 ~L~~L~Ls~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~ 177 (330)
T 1xku_A 101 KLERLYLSKNQLKE-LPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIR 177 (330)
T ss_dssp TCCEEECCSSCCSB-CCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEE
T ss_pred CCCEEECCCCcCCc-cChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEE
Confidence 45666666666552 333322 4555555555555543332222 45555555555553 24444555555555555
Q ss_pred eecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeecccccccccc-ccCC-CCccEEEcccccccc
Q 007107 160 VSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSG-LPLTTLNVANNHFSG 237 (618)
Q Consensus 160 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~-~~L~~L~l~~N~l~g 237 (618)
+++|+++. +|..+. ++|+.|+|++|++++..|..|..+++|++|+|++|++++..+ .+.. .+|+.|+|++|+++
T Consensus 178 l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~- 253 (330)
T 1xku_A 178 IADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV- 253 (330)
T ss_dssp CCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-
T ss_pred CCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-
Confidence 55555543 222221 445555555555544444444445555555555555444332 1111 23455555555544
Q ss_pred cCchhh---hcccchhccCCcCC
Q 007107 238 WIPREL---ISIRTFIYDGNSFD 257 (618)
Q Consensus 238 ~ip~~~---~~l~~l~~~~N~~~ 257 (618)
.+|..+ .+|+.|++.+|++.
T Consensus 254 ~lp~~l~~l~~L~~L~l~~N~i~ 276 (330)
T 1xku_A 254 KVPGGLADHKYIQVVYLHNNNIS 276 (330)
T ss_dssp SCCTTTTTCSSCCEEECCSSCCC
T ss_pred cCChhhccCCCcCEEECCCCcCC
Confidence 444333 22334444444444
No 325
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.78 E-value=2.4e-19 Score=195.63 Aligned_cols=175 Identities=17% Similarity=0.223 Sum_probs=130.2
Q ss_pred CEEEEEcCCCCCcccccccc-----cCCCCCCEEeecCCCC--------------------------CCCCCCCCCCCcc
Q 007107 84 AVVSIDISGLGLSGTMGYLL-----SDLLSLRKFDLSGNSI--------------------------HDTIPYQLPPNLT 132 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l-----~~l~~L~~L~L~~N~l--------------------------~~~~p~~~~~~L~ 132 (618)
+++.|++++|.+.|.+|..+ ..+++|+.|++++|.+ ....-....++|+
T Consensus 248 ~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~ 327 (520)
T 2z7x_B 248 TVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFL 327 (520)
T ss_dssp SCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCC
T ss_pred cccEEEeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCccc
Confidence 56777777777777777766 5555555555555544 3211013347888
Q ss_pred eEecccccccccCCcccccCCCccEEEeecCCCCC--chhhhhcCCCCCCeEEcccCcCCCCCCCC-cccCCCcCeeeec
Q 007107 133 SLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQ--SIGDIFGNLAGLATLDLSFNNFSGDLPNS-FISLSNISSLYLQ 209 (618)
Q Consensus 133 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~L~~L~l~ 209 (618)
+|+|++|++++.+|..++++++|++|+|++|++++ .+|..++.+++|+.|+|++|++++.+|.. +..+++|++|+|+
T Consensus 328 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls 407 (520)
T 2z7x_B 328 HLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMS 407 (520)
T ss_dssp EEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECC
T ss_pred EEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECc
Confidence 89999999888888888888899999999999887 56678888889999999999988756654 7788888888888
Q ss_pred cccccccccccCCCCccEEEcccccccccCchhh---hcccchhccCCcCCCC
Q 007107 210 NNQVTGSLNVFSGLPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNG 259 (618)
Q Consensus 210 ~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip~~~---~~l~~l~~~~N~~~~~ 259 (618)
+|++++.++.....+|+.|+|++|+|+ .+|..+ .+|+.|++.+|.+..-
T Consensus 408 ~N~l~~~~~~~l~~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l 459 (520)
T 2z7x_B 408 SNILTDTIFRCLPPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSV 459 (520)
T ss_dssp SSCCCGGGGGSCCTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCC
T ss_pred CCCCCcchhhhhcccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCcc
Confidence 888887666554467888888888888 777654 4566778888887743
No 326
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.78 E-value=3e-19 Score=174.10 Aligned_cols=169 Identities=18% Similarity=0.237 Sum_probs=145.1
Q ss_pred CCEEEEEcCCCC-CcccccccccCCCCCCEEeecC-CCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCcc--
Q 007107 83 SAVVSIDISGLG-LSGTMGYLLSDLLSLRKFDLSG-NSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLS-- 156 (618)
Q Consensus 83 ~~v~~l~l~~~~-l~~~~~~~l~~l~~L~~L~L~~-N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~-- 156 (618)
.+++.|+|++|+ +++..+..|.++++|++|+|++ |+|++..+..+. ++|++|+|++|++++ +|. +..+++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L 132 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIF 132 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSE
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccc
Confidence 579999999997 8888788999999999999999 999966655553 899999999999996 676 88888888
Q ss_pred -EEEeecC-CCCCchhhhhcCCCCCC-eEEcccCcCCCCCCCCcccCCCcCeeeecccc-ccccccc-cCC--CCccEEE
Q 007107 157 -YLNVSRN-SLTQSIGDIFGNLAGLA-TLDLSFNNFSGDLPNSFISLSNISSLYLQNNQ-VTGSLNV-FSG--LPLTTLN 229 (618)
Q Consensus 157 -~L~L~~N-~l~~~~p~~~~~l~~L~-~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~~~~~~-~~~--~~L~~L~ 229 (618)
+|+|++| ++++..+..|..+++|+ .|+|++|+++ .+|......++|+.|+|++|+ +++..+. +.. .+|+.|+
T Consensus 133 ~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~ 211 (239)
T 2xwt_C 133 FILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLD 211 (239)
T ss_dssp EEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEE
T ss_pred cEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEE
Confidence 9999999 99988888899999999 9999999999 677655555899999999995 9876544 444 4699999
Q ss_pred cccccccccCchhhhcccchhccCC
Q 007107 230 VANNHFSGWIPRELISIRTFIYDGN 254 (618)
Q Consensus 230 l~~N~l~g~ip~~~~~l~~l~~~~N 254 (618)
|++|+|++..+..+.+++.|.+.++
T Consensus 212 l~~N~l~~l~~~~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 212 VSQTSVTALPSKGLEHLKELIARNT 236 (239)
T ss_dssp CTTCCCCCCCCTTCTTCSEEECTTC
T ss_pred CCCCccccCChhHhccCceeeccCc
Confidence 9999999655566889999888765
No 327
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.78 E-value=1.8e-18 Score=164.77 Aligned_cols=172 Identities=23% Similarity=0.266 Sum_probs=143.1
Q ss_pred eeEeeCCCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCC
Q 007107 77 GVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVS 154 (618)
Q Consensus 77 gv~c~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~ 154 (618)
+..|.. +.+++++++++.. |..+ .++|++|+|++|++++..+..+. ++|++|+|++|++++..+..|..+++
T Consensus 4 ~C~C~~---~~v~c~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 77 (208)
T 2o6s_A 4 RCSCSG---TTVECYSQGRTSV-PTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTS 77 (208)
T ss_dssp TCEEET---TEEECCSSCCSSC-CSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTT
T ss_pred CCEECC---CEEEecCCCccCC-CCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCC
Confidence 456754 4678899988754 4333 46899999999999976665554 89999999999999777777899999
Q ss_pred ccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccc-cCC-CCccEEEccc
Q 007107 155 LSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVAN 232 (618)
Q Consensus 155 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~l~~ 232 (618)
|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++.++. +.. .+|+.|+|++
T Consensus 78 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 157 (208)
T 2o6s_A 78 LTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHD 157 (208)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred cCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecC
Confidence 99999999999988888899999999999999999977777789999999999999999987764 333 4699999999
Q ss_pred ccccccCchhhhcccchhccCCcCCC
Q 007107 233 NHFSGWIPRELISIRTFIYDGNSFDN 258 (618)
Q Consensus 233 N~l~g~ip~~~~~l~~l~~~~N~~~~ 258 (618)
|.+.+..| +++.|.+..|.+..
T Consensus 158 N~~~~~~~----~l~~L~~~~n~~~g 179 (208)
T 2o6s_A 158 NPWDCTCP----GIRYLSEWINKHSG 179 (208)
T ss_dssp CCBCCCTT----TTHHHHHHHHHCTT
T ss_pred CCeecCCC----CHHHHHHHHHhCCc
Confidence 99987654 56777777777664
No 328
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.78 E-value=1.7e-19 Score=183.74 Aligned_cols=168 Identities=20% Similarity=0.170 Sum_probs=97.9
Q ss_pred CCCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEee
Q 007107 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (618)
Q Consensus 82 ~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (618)
-.+++.|+|++|.+++..+ +..+++|++|+|++|+|++..+. ++|+.|+|++|++++..+. .+++|++|+|+
T Consensus 57 l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~~---~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~ 128 (317)
T 3o53_A 57 FTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG---PSIETLHAANNNISRVSCS---RGQGKKNIYLA 128 (317)
T ss_dssp CTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEEC---TTCCEEECCSSCCSEEEEC---CCSSCEEEECC
T ss_pred CCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccCC---CCcCEEECCCCccCCcCcc---ccCCCCEEECC
Confidence 3567778888887776554 77777777777777777643221 4555555555555543332 24556666666
Q ss_pred cCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcc-cCCCcCeeeeccccccccccccCCCCccEEEcccccccccCc
Q 007107 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFI-SLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIP 240 (618)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip 240 (618)
+|++++..+..++.+++|++|+|++|++++..|..+. .+++|++|+|++|+|++........+|+.|+|++|++++..+
T Consensus 129 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~~l~~ 208 (317)
T 3o53_A 129 NNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFMGP 208 (317)
T ss_dssp SSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCEECG
T ss_pred CCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccccccccccCCEEECCCCcCCcchh
Confidence 6666665555666666666666666666654444443 456666666666666654333334446666666666664322
Q ss_pred h--hhhcccchhccCCcCC
Q 007107 241 R--ELISIRTFIYDGNSFD 257 (618)
Q Consensus 241 ~--~~~~l~~l~~~~N~~~ 257 (618)
. .+.+|+.|++++|.+.
T Consensus 209 ~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 209 EFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp GGGGGTTCSEEECTTSCCC
T ss_pred hhcccCcccEEECcCCccc
Confidence 2 1234455556666555
No 329
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=3.9e-19 Score=175.22 Aligned_cols=139 Identities=20% Similarity=0.175 Sum_probs=106.3
Q ss_pred CcccceeccCccceEEEEEE-cCCcE--EEEEEcCccccc----------------------HHHHHHHHHHHHHhhcCC
Q 007107 412 FSQEFLIGEGSLGRVYRAEF-ANGKI--MAVKKIDNAALS----------------------LQEEDNFLEAVSNMSRLR 466 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~-~~g~~--vavK~~~~~~~~----------------------~~~~~~~~~e~~~l~~l~ 466 (618)
|...+.||+|+||.||+|.. .+|+. ||||+++..... ......+.+|++.+.++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999988 67988 999987543211 112346788999999998
Q ss_pred CCcc--cccceEEeeCCeEEEEEEecCC-C----ChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHh-hcCCCCcee
Q 007107 467 HPNI--VTLAGYCAEHGQRLLVYEYVGN-G----NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLH-EVCLPSVVH 538 (618)
Q Consensus 467 h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~~~iiH 538 (618)
|+++ ..++++ +..++||||+++ | +|.++... .++..+..++.|++.||+||| +. +|+|
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---givH 194 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELVH 194 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 8864 233322 356899999942 4 66655421 224456789999999999999 88 9999
Q ss_pred cCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 539 RNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 539 ~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
|||||+|||+++ .++|+|||++....
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred CCCCHHHEEEcC--cEEEEECcccccCC
Confidence 999999999998 99999999997653
No 330
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.78 E-value=2.2e-19 Score=182.85 Aligned_cols=168 Identities=20% Similarity=0.147 Sum_probs=145.1
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeec
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (618)
.+++.|+|++|++++..|..|..+++|++|+|++|.+++..|..-.++|++|+|++|++++.. .+++|++|++++
T Consensus 34 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~ 108 (317)
T 3o53_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQELL-----VGPSIETLHAAN 108 (317)
T ss_dssp GGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEEETTCTTCCEEECCSSEEEEEE-----ECTTCCEEECCS
T ss_pred CCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchhhhhcCCCCEEECcCCcccccc-----CCCCcCEEECCC
Confidence 379999999999999988999999999999999999998777555599999999999999542 448999999999
Q ss_pred CCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccc-cC--CCCccEEEcccccccccC
Q 007107 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FS--GLPLTTLNVANNHFSGWI 239 (618)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~--~~~L~~L~l~~N~l~g~i 239 (618)
|++++..+.. +++|+.|+|++|++++..|..+..+++|++|+|++|+|++..+. +. ..+|+.|+|++|.+++.
T Consensus 109 n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~- 184 (317)
T 3o53_A 109 NNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV- 184 (317)
T ss_dssp SCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-
T ss_pred CccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-
Confidence 9999877654 68899999999999987788899999999999999999986543 32 35699999999999965
Q ss_pred ch--hhhcccchhccCCcCCCC
Q 007107 240 PR--ELISIRTFIYDGNSFDNG 259 (618)
Q Consensus 240 p~--~~~~l~~l~~~~N~~~~~ 259 (618)
|. .+.+|+.|++++|.+..-
T Consensus 185 ~~~~~l~~L~~L~Ls~N~l~~l 206 (317)
T 3o53_A 185 KGQVVFAKLKTLDLSSNKLAFM 206 (317)
T ss_dssp ECCCCCTTCCEEECCSSCCCEE
T ss_pred ccccccccCCEEECCCCcCCcc
Confidence 43 368899999999988753
No 331
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.78 E-value=8.6e-19 Score=189.01 Aligned_cols=178 Identities=22% Similarity=0.202 Sum_probs=130.7
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCC-------
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMV------- 153 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~------- 153 (618)
.+++.|+|++|.+.+..+..|..+++|+.|+|++|++++..+..+. ++|+.|+|++|++++..+..|..++
T Consensus 128 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l 207 (477)
T 2id5_A 128 YNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEI 207 (477)
T ss_dssp TTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEE
T ss_pred ccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeC
Confidence 4677777777777777777777777777777777777754432222 5566666666665555444444444
Q ss_pred -----------------CccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeecccccccc
Q 007107 154 -----------------SLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGS 216 (618)
Q Consensus 154 -----------------~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~ 216 (618)
+|++|+|++|++++..+..|..+++|+.|+|++|.|++..+..|..+++|+.|+|++|++++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 287 (477)
T 2id5_A 208 SHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVV 287 (477)
T ss_dssp ECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEE
T ss_pred CCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceE
Confidence 566666666777766667788899999999999999977778889999999999999999986
Q ss_pred ccc-cCC-CCccEEEcccccccccCchhh---hcccchhccCCcCCCCC
Q 007107 217 LNV-FSG-LPLTTLNVANNHFSGWIPREL---ISIRTFIYDGNSFDNGP 260 (618)
Q Consensus 217 ~~~-~~~-~~L~~L~l~~N~l~g~ip~~~---~~l~~l~~~~N~~~~~~ 260 (618)
.+. +.. .+|+.|+|++|+|++..+..| .+|+.|++.+|+|.|.+
T Consensus 288 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 288 EPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDC 336 (477)
T ss_dssp CTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSG
T ss_pred CHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCcc
Confidence 553 333 459999999999997655544 56788999999998864
No 332
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.77 E-value=2.3e-18 Score=172.78 Aligned_cols=153 Identities=21% Similarity=0.214 Sum_probs=135.1
Q ss_pred CCCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEE
Q 007107 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (618)
Q Consensus 82 ~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (618)
..+++.|+|++|+|++..+. ..+++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+
T Consensus 54 l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~ 130 (290)
T 1p9a_G 54 YTRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 130 (290)
T ss_dssp CTTCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEE
Confidence 36899999999999876443 89999999999999999 6776554 8999999999999988888999999999999
Q ss_pred eecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCC-CCccEEEcccccccc
Q 007107 160 VSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSG-LPLTTLNVANNHFSG 237 (618)
Q Consensus 160 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~l~~N~l~g 237 (618)
|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|+..+..+.. ..|+.|+|++|++.-
T Consensus 131 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccC
Confidence 999999999888999999999999999999965556678899999999999999976655443 469999999999973
No 333
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=1.9e-18 Score=173.50 Aligned_cols=169 Identities=21% Similarity=0.266 Sum_probs=140.1
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeec
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (618)
.+++.|++++|++... +.+..+++|+.|+|++|++++..+..-.++|+.|+|++|++++ +| .+..+++|++|+|++
T Consensus 46 ~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~ 121 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEH 121 (291)
T ss_dssp HTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTT
T ss_pred CcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcccccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCC
Confidence 4688999999999765 3588999999999999999977664444899999999999986 33 489999999999999
Q ss_pred CCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCCccEEEcccccccccCch-
Q 007107 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPR- 241 (618)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip~- 241 (618)
|++++. +.+..+++|+.|+|++|++++. ..+..+++|++|+|++|+|++..+.....+|+.|+|++|.+++ +|.
T Consensus 122 n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~-l~~l 196 (291)
T 1h6t_A 122 NGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD-LRAL 196 (291)
T ss_dssp SCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB-CGGG
T ss_pred CcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCC-Chhh
Confidence 999975 4688899999999999999954 5788999999999999999987774444569999999999985 443
Q ss_pred -hhhcccchhccCCcCCCCC
Q 007107 242 -ELISIRTFIYDGNSFDNGP 260 (618)
Q Consensus 242 -~~~~l~~l~~~~N~~~~~~ 260 (618)
.+.+|+.|++.+|++.+.+
T Consensus 197 ~~l~~L~~L~l~~n~i~~~~ 216 (291)
T 1h6t_A 197 AGLKNLDVLELFSQECLNKP 216 (291)
T ss_dssp TTCTTCSEEEEEEEEEECCC
T ss_pred ccCCCCCEEECcCCcccCCc
Confidence 3466778889999887643
No 334
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=4e-18 Score=160.08 Aligned_cols=149 Identities=24% Similarity=0.303 Sum_probs=127.5
Q ss_pred CEEeecCCCCCCCCCCCCCCCcceEecccccccccCCc-ccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCc
Q 007107 110 RKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPY-SIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNN 188 (618)
Q Consensus 110 ~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 188 (618)
+.|++++|+|+ .+|..+..+|+.|+|++|+|++..+. .+..+++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 89 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 89 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred CEEEcCCCCcC-cCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCc
Confidence 78999999996 78988889999999999999977665 48999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccCCCcCeeeeccccccccccc-cCC-CCccEEEcccccccccCch-hhh-cccchhccCCcCCCC
Q 007107 189 FSGDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFSGWIPR-ELI-SIRTFIYDGNSFDNG 259 (618)
Q Consensus 189 l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~l~~N~l~g~ip~-~~~-~l~~l~~~~N~~~~~ 259 (618)
|++..|..|..+++|++|+|++|+|++.++. +.. .+|+.|+|++|++++..+- .+. .+....+.++...|.
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~ 164 (192)
T 1w8a_A 90 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 164 (192)
T ss_dssp CCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBC
T ss_pred CCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCC
Confidence 9988888899999999999999999997654 333 4699999999999987663 222 244445556666664
No 335
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.76 E-value=3.5e-18 Score=186.08 Aligned_cols=156 Identities=21% Similarity=0.332 Sum_probs=131.7
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeec
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (618)
.+++.|+|++|+|+ .+| ..+++|+.|+|++|+|++ +|. +..+|+.|+|++|+|++ +|. .+++|++|+|++
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~ 149 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPASLKHLDVDNNQLTM-LPE---LPALLEYINADN 149 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCS
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhcCCCEEECCCCcCCC-CCC---cCccccEEeCCC
Confidence 57999999999998 456 568999999999999997 777 77899999999999997 676 689999999999
Q ss_pred CCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCCc-------cEEEcccccc
Q 007107 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPL-------TTLNVANNHF 235 (618)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L-------~~L~l~~N~l 235 (618)
|+|++ +|. .+++|+.|+|++|+|++ +|. |. ++|+.|+|++|+|+..+. +.. +| +.|+|++|+|
T Consensus 150 N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp~-~~~-~L~~~~~~L~~L~Ls~N~l 219 (571)
T 3cvr_A 150 NQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLESLPA-VPV-RNHHSEETEIFFRCRENRI 219 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSSCCC-CC---------CCEEEECCSSCC
T ss_pred CccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCchhh-HHH-hhhcccccceEEecCCCcc
Confidence 99997 555 57899999999999996 887 66 899999999999996554 433 67 9999999999
Q ss_pred cccCchhhh---cccchhccCCcCCCC
Q 007107 236 SGWIPRELI---SIRTFIYDGNSFDNG 259 (618)
Q Consensus 236 ~g~ip~~~~---~l~~l~~~~N~~~~~ 259 (618)
+ .+|..+. +|+.|++.+|++.+.
T Consensus 220 ~-~lp~~l~~l~~L~~L~L~~N~l~~~ 245 (571)
T 3cvr_A 220 T-HIPENILSLDPTCTIILEDNPLSSR 245 (571)
T ss_dssp C-CCCGGGGGSCTTEEEECCSSSCCHH
T ss_pred e-ecCHHHhcCCCCCEEEeeCCcCCCc
Confidence 9 6887654 566788999998763
No 336
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.76 E-value=7.5e-19 Score=193.82 Aligned_cols=177 Identities=24% Similarity=0.281 Sum_probs=144.1
Q ss_pred CCEEEEEcCCCCCcccc--cccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCC-cccccCCCccE
Q 007107 83 SAVVSIDISGLGLSGTM--GYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLP-YSIASMVSLSY 157 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~--~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~ 157 (618)
..++.|++++|++++.. +..+..+++|++|+|++|.+++..+. +. ++|+.|+|++|++++..| ..+.++++|++
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred CCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 46788888888887654 67788888899999998888855443 33 789999999999987766 56788999999
Q ss_pred EEeecCCCCCchhhhhcCCCCCCeEEcccCcCC-CCCCCCcccCCCcCeeeeccccccccccc-cCC-CCccEEEccccc
Q 007107 158 LNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFS-GDLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNH 234 (618)
Q Consensus 158 L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~l~~N~ 234 (618)
|+|++|++++.+|..|..+++|+.|+|++|+++ +.+|..+..+++|++|+|++|++++..+. +.. .+|+.|+|++|+
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 505 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQ 505 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCc
Confidence 999999999888888999999999999999987 57888889999999999999999887553 333 459999999999
Q ss_pred ccccCchhh---hcccchhccCCcCCCCC
Q 007107 235 FSGWIPREL---ISIRTFIYDGNSFDNGP 260 (618)
Q Consensus 235 l~g~ip~~~---~~l~~l~~~~N~~~~~~ 260 (618)
+++..|..+ .+|+.|++.+|++.|..
T Consensus 506 l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 506 LKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CCCCCHHHhhcccCCcEEEecCCcccCCC
Confidence 998776555 56677888999998864
No 337
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.75 E-value=7.2e-18 Score=170.80 Aligned_cols=170 Identities=23% Similarity=0.315 Sum_probs=144.4
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeec
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (618)
.+++.|+++++++... + .+..+++|++|+|++|.+++..+..-.++|++|+|++|++++. ..+..+++|++|+|++
T Consensus 41 ~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~ 116 (308)
T 1h6u_A 41 DGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTS 116 (308)
T ss_dssp HTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGGGTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECTT
T ss_pred CCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChhHccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECCC
Confidence 4799999999999864 3 6899999999999999999766633348999999999999964 4799999999999999
Q ss_pred CCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCCccEEEcccccccccCc-h
Q 007107 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIP-R 241 (618)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip-~ 241 (618)
|++++..+ +..+++|+.|+|++|++++..+ +..+++|++|+|++|++++..+.....+|+.|+|++|++++..+ .
T Consensus 117 n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~l~ 192 (308)
T 1h6u_A 117 TQITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLA 192 (308)
T ss_dssp SCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGGGG
T ss_pred CCCCCchh--hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcChhhc
Confidence 99998543 8999999999999999995443 88999999999999999987664444569999999999996544 3
Q ss_pred hhhcccchhccCCcCCCCC
Q 007107 242 ELISIRTFIYDGNSFDNGP 260 (618)
Q Consensus 242 ~~~~l~~l~~~~N~~~~~~ 260 (618)
.+.+|+.|++++|.+...+
T Consensus 193 ~l~~L~~L~L~~N~l~~~~ 211 (308)
T 1h6u_A 193 SLPNLIEVHLKNNQISDVS 211 (308)
T ss_dssp GCTTCCEEECTTSCCCBCG
T ss_pred CCCCCCEEEccCCccCccc
Confidence 5577889999999887643
No 338
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.75 E-value=2.7e-18 Score=189.28 Aligned_cols=174 Identities=20% Similarity=0.204 Sum_probs=152.6
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEe
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 160 (618)
.+++.|+|++|++++..+..|.++++|++|+|++|++++..|..+. ++|++|+|++|++++..|..|+++++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 3689999999999999999999999999999999999987776665 89999999999999888899999999999999
Q ss_pred ecCCCCCchhhhhcCCCCCCeEEcccCcCCC-CCCCCcccCCCcCeeeeccccccccccc-cCC-CCc----cEEEcccc
Q 007107 161 SRNSLTQSIGDIFGNLAGLATLDLSFNNFSG-DLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPL----TTLNVANN 233 (618)
Q Consensus 161 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L----~~L~l~~N 233 (618)
++|++++..+..|+++++|++|+|++|.+++ .+|..|+++++|++|++++|++++..+. +.. .+| ..|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 9999998877789999999999999999997 4799999999999999999999986543 221 234 79999999
Q ss_pred cccccCchhhh--cccchhccCCcC
Q 007107 234 HFSGWIPRELI--SIRTFIYDGNSF 256 (618)
Q Consensus 234 ~l~g~ip~~~~--~l~~l~~~~N~~ 256 (618)
.+++..|..+. +++.|++.+|..
T Consensus 188 ~l~~~~~~~~~~~~L~~L~l~~n~~ 212 (570)
T 2z63_A 188 PMNFIQPGAFKEIRLHKLTLRNNFD 212 (570)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCS
T ss_pred CceecCHHHhccCcceeEecccccc
Confidence 99988777664 477888888743
No 339
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.75 E-value=4.8e-18 Score=185.22 Aligned_cols=150 Identities=21% Similarity=0.269 Sum_probs=118.5
Q ss_pred CCCEEeecCCCCCCCCCCCC-----C--CCcceEecccccccccCC-c------------------------c-cccCCC
Q 007107 108 SLRKFDLSGNSIHDTIPYQL-----P--PNLTSLNLASNNFSGNLP-Y------------------------S-IASMVS 154 (618)
Q Consensus 108 ~L~~L~L~~N~l~~~~p~~~-----~--~~L~~L~L~~N~l~~~~p-~------------------------~-~~~l~~ 154 (618)
+|++|+|++|+++|.+|..+ . ++|+.+++++|.+ .+| . . +..+++
T Consensus 248 ~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~ 325 (520)
T 2z7x_B 248 TVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISP 325 (520)
T ss_dssp SCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCC
T ss_pred cccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCCc
Confidence 56666667777776777655 2 3444444444443 222 0 0 168899
Q ss_pred ccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCC--CCCCCcccCCCcCeeeeccccccccccc--cCC-CCccEEE
Q 007107 155 LSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSG--DLPNSFISLSNISSLYLQNNQVTGSLNV--FSG-LPLTTLN 229 (618)
Q Consensus 155 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~~~~~~--~~~-~~L~~L~ 229 (618)
|++|+|++|++++.+|..++.+++|+.|+|++|++++ .+|..+..+++|++|+|++|++++.++. +.. .+|+.|+
T Consensus 326 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~ 405 (520)
T 2z7x_B 326 FLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLN 405 (520)
T ss_dssp CCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEE
T ss_pred ccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEE
Confidence 9999999999999999999999999999999999996 5677899999999999999999985543 333 4699999
Q ss_pred cccccccccCchhh-hcccchhccCCcCCCC
Q 007107 230 VANNHFSGWIPREL-ISIRTFIYDGNSFDNG 259 (618)
Q Consensus 230 l~~N~l~g~ip~~~-~~l~~l~~~~N~~~~~ 259 (618)
|++|++++.+|..+ .+|+.|++++|.+..-
T Consensus 406 Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~~i 436 (520)
T 2z7x_B 406 MSSNILTDTIFRCLPPRIKVLDLHSNKIKSI 436 (520)
T ss_dssp CCSSCCCGGGGGSCCTTCCEEECCSSCCCCC
T ss_pred CcCCCCCcchhhhhcccCCEEECCCCccccc
Confidence 99999999999888 5999999999998743
No 340
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.75 E-value=5e-18 Score=157.22 Aligned_cols=134 Identities=20% Similarity=0.289 Sum_probs=69.7
Q ss_pred CCCCCCCceeEeeCCCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCC
Q 007107 69 DPCGESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLP 146 (618)
Q Consensus 69 ~~c~~~w~gv~c~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p 146 (618)
+.|.|+|+++.|... +++. +|..+ .++|+.|+|++|++++..+..+. ++|++|+|++|+|++..+
T Consensus 3 ~~C~C~~~~l~~~~~----------~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 69 (177)
T 2o6r_A 3 SRCSCSGTEIRCNSK----------GLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPD 69 (177)
T ss_dssp TTCEEETTEEECCSS----------CCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT
T ss_pred CCCEeCCCEEEecCC----------CCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeCh
Confidence 456667887777644 3332 22222 24566666666666644333332 455555555555554444
Q ss_pred cccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccc
Q 007107 147 YSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTG 215 (618)
Q Consensus 147 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 215 (618)
..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+..+++|++|+|++|++++
T Consensus 70 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 70 GVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred hHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 445555555555555555555555555555555555555555553333334445555555555554443
No 341
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.75 E-value=7.3e-18 Score=167.95 Aligned_cols=178 Identities=22% Similarity=0.246 Sum_probs=157.5
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEe
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 160 (618)
.+++.|+|++|++.+..+..+..+++|++|+|++|.+++..+..+. ++|++|+|++|++++..+..+.++++|++|+|
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 5799999999999998888999999999999999999987776665 89999999999999887778999999999999
Q ss_pred ecCCCCCc-hhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcC----eeeeccccccccccc-cCCCCccEEEccccc
Q 007107 161 SRNSLTQS-IGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNIS----SLYLQNNQVTGSLNV-FSGLPLTTLNVANNH 234 (618)
Q Consensus 161 ~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~----~L~l~~N~l~~~~~~-~~~~~L~~L~l~~N~ 234 (618)
++|++++. +|..|..+++|+.|+|++|++++..+..+..+.+|+ .|++++|++++..+. +...+|+.|+|++|+
T Consensus 132 ~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~ 211 (276)
T 2z62_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQ 211 (276)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSC
T ss_pred cCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCc
Confidence 99999975 699999999999999999999987777888877777 899999999987654 344579999999999
Q ss_pred ccccCchh---hhcccchhccCCcCCCCC
Q 007107 235 FSGWIPRE---LISIRTFIYDGNSFDNGP 260 (618)
Q Consensus 235 l~g~ip~~---~~~l~~l~~~~N~~~~~~ 260 (618)
+++..+.. +.+|+.|++.+|+|.|..
T Consensus 212 l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 212 LKSVPDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp CSCCCTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred eeecCHhHhcccccccEEEccCCcccccC
Confidence 99665544 456788999999999975
No 342
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.74 E-value=7.9e-18 Score=187.83 Aligned_cols=157 Identities=20% Similarity=0.197 Sum_probs=133.7
Q ss_pred EcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEeecCCCC
Q 007107 89 DISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLT 166 (618)
Q Consensus 89 ~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 166 (618)
+-++.+|+. +|..+. +++++|||++|+|++..|..|. ++|++|+|++|+|++..|..|.+|++|++|+|++|+|+
T Consensus 37 ~c~~~~l~~-vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~ 113 (635)
T 4g8a_A 37 QCMELNFYK-IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 113 (635)
T ss_dssp ECTTSCCSS-CCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred ECCCCCcCc-cCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC
Confidence 455556653 455442 4799999999999977776675 89999999999999888889999999999999999999
Q ss_pred CchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeecccccccc-ccc-cC-CCCccEEEcccccccccCchhh
Q 007107 167 QSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGS-LNV-FS-GLPLTTLNVANNHFSGWIPREL 243 (618)
Q Consensus 167 ~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-~~~-~~-~~~L~~L~l~~N~l~g~ip~~~ 243 (618)
+..+..|.++++|++|+|++|+|++..+..|+++++|++|+|++|.|++. ++. +. ...|+.|+|++|+|++..|..+
T Consensus 114 ~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l 193 (635)
T 4g8a_A 114 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 193 (635)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccc
Confidence 98889999999999999999999977777899999999999999999873 343 33 3469999999999999888888
Q ss_pred hcccc
Q 007107 244 ISIRT 248 (618)
Q Consensus 244 ~~l~~ 248 (618)
..+..
T Consensus 194 ~~L~~ 198 (635)
T 4g8a_A 194 RVLHQ 198 (635)
T ss_dssp HHHHT
T ss_pred cchhh
Confidence 76654
No 343
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.74 E-value=8.8e-18 Score=184.95 Aligned_cols=110 Identities=21% Similarity=0.215 Sum_probs=97.3
Q ss_pred ccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCC--CCCCCcccCCCcCeeeeccccccccccc--cCC-CC
Q 007107 150 ASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSG--DLPNSFISLSNISSLYLQNNQVTGSLNV--FSG-LP 224 (618)
Q Consensus 150 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~~~~~~--~~~-~~ 224 (618)
..+++|++|+|++|++++.+|..++++++|+.|+|++|++++ .+|..+..+++|++|+|++|++++.++. +.. .+
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 678999999999999999999999999999999999999996 3356789999999999999999985543 333 46
Q ss_pred ccEEEcccccccccCchhh-hcccchhccCCcCCCC
Q 007107 225 LTTLNVANNHFSGWIPREL-ISIRTFIYDGNSFDNG 259 (618)
Q Consensus 225 L~~L~l~~N~l~g~ip~~~-~~l~~l~~~~N~~~~~ 259 (618)
|+.|+|++|++++.+|..+ .+|+.|++++|.+..-
T Consensus 430 L~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~~i 465 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIMSI 465 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCCTTCSEEECCSSCCCCC
T ss_pred CCEEECCCCCCCcchhhhhcCcCCEEECCCCcCccc
Confidence 9999999999999999988 5999999999998743
No 344
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.73 E-value=1.2e-17 Score=179.47 Aligned_cols=166 Identities=27% Similarity=0.394 Sum_probs=84.3
Q ss_pred EEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeecCC
Q 007107 85 VVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNS 164 (618)
Q Consensus 85 v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 164 (618)
++.|++++|++.+. +.+..+++|+.|+|++|.+++..|....++|+.|+|++|++++..+ +..+++|++|+|++|+
T Consensus 223 L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~ 298 (466)
T 1o6v_A 223 LDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQ 298 (466)
T ss_dssp CCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSC
T ss_pred CCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchhhhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCc
Confidence 44444444444332 2344455555555555555544443333555555555555554322 5555555555555555
Q ss_pred CCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCCccEEEcccccccccCc-hhh
Q 007107 165 LTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIP-REL 243 (618)
Q Consensus 165 l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip-~~~ 243 (618)
+++..+ +..+++|+.|+|++|++++..| +..+++|+.|++++|++++........+|+.|++++|++++..| ..+
T Consensus 299 l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~l 374 (466)
T 1o6v_A 299 LEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANL 374 (466)
T ss_dssp CSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBCGGGTTC
T ss_pred ccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCchhhccCCCCCEEeCCCCccCccchhhcC
Confidence 554433 4555555555555555554433 45555555555555555554322222346666666666665554 223
Q ss_pred hcccchhccCCcCCC
Q 007107 244 ISIRTFIYDGNSFDN 258 (618)
Q Consensus 244 ~~l~~l~~~~N~~~~ 258 (618)
.+|+.|++.+|+|..
T Consensus 375 ~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 375 TRITQLGLNDQAWTN 389 (466)
T ss_dssp TTCCEEECCCEEEEC
T ss_pred CCCCEEeccCCcccC
Confidence 445555566666554
No 345
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.73 E-value=1.8e-17 Score=166.41 Aligned_cols=149 Identities=23% Similarity=0.278 Sum_probs=129.6
Q ss_pred CCCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEee
Q 007107 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (618)
Q Consensus 82 ~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (618)
-.+++.|+|++|++++..+ +..+++|++|+|++|.+++..+..-.++|+.|+|++|++++. ..+..+++|++|+|+
T Consensus 67 l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~ 142 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLG 142 (291)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCGGGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECC
T ss_pred CCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCChhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEcc
Confidence 4689999999999998765 999999999999999999743333348999999999999964 578999999999999
Q ss_pred cCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCCccEEEccccccccc
Q 007107 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGW 238 (618)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ 238 (618)
+|++++. ..+..+++|+.|+|++|++++..| +..+++|++|+|++|+|++........+|+.|+|++|+++..
T Consensus 143 ~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l~~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 143 NNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp SSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBCGGGTTCTTCSEEEEEEEEEECC
T ss_pred CCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCChhhccCCCCCEEECcCCcccCC
Confidence 9999986 678999999999999999996554 899999999999999999865433445699999999999853
No 346
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.73 E-value=2.2e-17 Score=181.26 Aligned_cols=174 Identities=24% Similarity=0.287 Sum_probs=149.8
Q ss_pred EeeCCCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCcc
Q 007107 79 ACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLS 156 (618)
Q Consensus 79 ~c~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 156 (618)
.|....+ .|+++++++. +|..+. ++|++|+|++|++++..|..+. ++|++|+|++|++++..|..|+++++|+
T Consensus 3 ~C~~~~~--c~~~~~~l~~-ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~ 77 (549)
T 2z81_A 3 SCDASGV--CDGRSRSFTS-IPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLE 77 (549)
T ss_dssp EECTTSE--EECTTSCCSS-CCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred cCCCCce--EECCCCcccc-ccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCC
Confidence 5777776 7999999985 555554 7999999999999988887776 8999999999999999899999999999
Q ss_pred EEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCC-CCCCCcccCCCcCeeeecccccccccc--ccCC-CCccEEEccc
Q 007107 157 YLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSG-DLPNSFISLSNISSLYLQNNQVTGSLN--VFSG-LPLTTLNVAN 232 (618)
Q Consensus 157 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g-~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~~-~~L~~L~l~~ 232 (618)
+|+|++|++++..|..|+++++|++|+|++|++++ .+|..+.++++|++|+|++|++.+.++ .+.. .+|+.|+|++
T Consensus 78 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~ 157 (549)
T 2z81_A 78 HLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKA 157 (549)
T ss_dssp EEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEE
T ss_pred EEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccC
Confidence 99999999999999999999999999999999996 467889999999999999999655443 3443 3599999999
Q ss_pred ccccccCchhhh---cccchhccCCcCC
Q 007107 233 NHFSGWIPRELI---SIRTFIYDGNSFD 257 (618)
Q Consensus 233 N~l~g~ip~~~~---~l~~l~~~~N~~~ 257 (618)
|++++.+|..+. +++.|++.+|...
T Consensus 158 n~l~~~~~~~l~~l~~L~~L~l~~n~~~ 185 (549)
T 2z81_A 158 LSLRNYQSQSLKSIRDIHHLTLHLSESA 185 (549)
T ss_dssp TTCCEECTTTTTTCSEEEEEEEECSBST
T ss_pred CcccccChhhhhccccCceEecccCccc
Confidence 999999998765 4567778887753
No 347
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.72 E-value=1.3e-17 Score=183.65 Aligned_cols=149 Identities=23% Similarity=0.281 Sum_probs=107.1
Q ss_pred CCCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEee
Q 007107 82 GSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (618)
Q Consensus 82 ~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (618)
..+++.|+|++|+|.+..+ +..|++|+.|+|++|.|++.....-.++|+.|+|++|+|++. ..+..|++|+.|+|+
T Consensus 64 l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls 139 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDLSSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLG 139 (605)
T ss_dssp CTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCTTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECC
T ss_pred CCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCChhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECC
Confidence 3567788888888877655 777888888888888877533222237788888888888753 457778888888888
Q ss_pred cCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCCccEEEccccccccc
Q 007107 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGW 238 (618)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ 238 (618)
+|+|++. ..+..+++|+.|+|++|+|++..| +..+++|+.|+|++|+|++........+|+.|+|++|++++.
T Consensus 140 ~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 140 NNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp SSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBCGGGTTCTTCSEEECCSEEEECC
T ss_pred CCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCChHHccCCCCCEEEccCCcCcCC
Confidence 8888765 567778888888888888876555 777788888888888887753333334588888888887754
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.72 E-value=1.2e-17 Score=172.43 Aligned_cols=191 Identities=20% Similarity=0.188 Sum_probs=151.1
Q ss_pred CCCCCCceeEeeC-----------CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC---CCcc-eE
Q 007107 70 PCGESWKGVACEG-----------SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP---PNLT-SL 134 (618)
Q Consensus 70 ~c~~~w~gv~c~~-----------~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~---~~L~-~L 134 (618)
.|.|+|..|.|+. ..++.|+|++|+|+...+..|.+|++|++|+|++|++.+.+|.... ++|+ .+
T Consensus 6 ~C~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l 85 (350)
T 4ay9_X 6 ICHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIR 85 (350)
T ss_dssp SSEEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEE
T ss_pred ccEeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhh
Confidence 3777999999974 2578999999999987778899999999999999999888876443 4544 57
Q ss_pred ecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEccc-CcCCCCCCCCcccCC-CcCeeeecccc
Q 007107 135 NLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSF-NNFSGDLPNSFISLS-NISSLYLQNNQ 212 (618)
Q Consensus 135 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~g~~p~~~~~l~-~L~~L~l~~N~ 212 (618)
+++.|+|+...|..|..+++|++|++++|+|++..+..+....++..|++++ |++....+..|..+. .++.|+|++|+
T Consensus 86 ~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~ 165 (350)
T 4ay9_X 86 IEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNG 165 (350)
T ss_dssp EEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSC
T ss_pred cccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccc
Confidence 8889999988899999999999999999999988877887888888898865 567744455666664 68889999999
Q ss_pred ccccccc-cCCCCccEEEcccccccccCch-h---hhcccchhccCCcCCCCC
Q 007107 213 VTGSLNV-FSGLPLTTLNVANNHFSGWIPR-E---LISIRTFIYDGNSFDNGP 260 (618)
Q Consensus 213 l~~~~~~-~~~~~L~~L~l~~N~l~g~ip~-~---~~~l~~l~~~~N~~~~~~ 260 (618)
|+...+. +...+|+.|++++|+.-+.+|. . +.+|+.|++++|.+..-+
T Consensus 166 i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp 218 (350)
T 4ay9_X 166 IQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLP 218 (350)
T ss_dssp CCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCC
T ss_pred ccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccC
Confidence 9876544 4455688999875443346664 2 356778888999877543
No 349
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.72 E-value=4.4e-17 Score=173.97 Aligned_cols=161 Identities=22% Similarity=0.354 Sum_probs=120.2
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeec
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (618)
.+++.|+|++|++++ +| .++++++|++|+|++|++++ +|.. ..+|++|+|++|++++ +| .++++++|++|++++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~-~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~ 204 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDL-PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADN 204 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCC-CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCS
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCC-cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCC
Confidence 467777888887776 55 57888888888888888875 5543 3588888888888886 55 578888888888888
Q ss_pred CCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCCccEEEcccccccccCchh
Q 007107 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPRE 242 (618)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip~~ 242 (618)
|++++ +|.. .++|+.|++++|+++ .+|. +..+++|++|++++|++++.... ..+|+.|++++|++++ +|..
T Consensus 205 N~l~~-l~~~---~~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~l~~~--~~~L~~L~l~~N~l~~-l~~~ 275 (454)
T 1jl5_A 205 NSLKK-LPDL---PLSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKTLPDL--PPSLEALNVRDNYLTD-LPEL 275 (454)
T ss_dssp SCCSS-CCCC---CTTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSSCCSC--CTTCCEEECCSSCCSC-CCCC
T ss_pred CcCCc-CCCC---cCcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCccccc--ccccCEEECCCCcccc-cCcc
Confidence 88886 3332 257888888888888 6774 77888888888888888874332 2568888888888885 6777
Q ss_pred hhcccchhccCCcCCC
Q 007107 243 LISIRTFIYDGNSFDN 258 (618)
Q Consensus 243 ~~~l~~l~~~~N~~~~ 258 (618)
+.+++.|++++|.+..
T Consensus 276 ~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 276 PQSLTFLDVSENIFSG 291 (454)
T ss_dssp CTTCCEEECCSSCCSE
T ss_pred cCcCCEEECcCCccCc
Confidence 7778888888887765
No 350
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=1.3e-17 Score=157.37 Aligned_cols=152 Identities=14% Similarity=0.210 Sum_probs=126.4
Q ss_pred ccCCCCCCEEeecCCCCCCCCC-CCCCCCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCe
Q 007107 103 LSDLLSLRKFDLSGNSIHDTIP-YQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLAT 181 (618)
Q Consensus 103 l~~l~~L~~L~L~~N~l~~~~p-~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 181 (618)
...+++|+.|+|++|.++ .+| ....++|++|+|++|.++. +..+..+++|++|+|++|++++..+..|+.+++|++
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLTGIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCTTGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhhcCCccEEeccCCCcc-ChHHHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 467889999999999999 444 2334899999999997763 358899999999999999999988999999999999
Q ss_pred EEcccCcCCCCCCCCcccCCCcCeeeecccc-ccccccccCCCCccEEEcccccccccCc-hhhhcccchhccCCcCC
Q 007107 182 LDLSFNNFSGDLPNSFISLSNISSLYLQNNQ-VTGSLNVFSGLPLTTLNVANNHFSGWIP-RELISIRTFIYDGNSFD 257 (618)
Q Consensus 182 L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~~L~~L~l~~N~l~g~ip-~~~~~l~~l~~~~N~~~ 257 (618)
|+|++|++++..|..+..+++|++|+|++|+ ++...+.....+|+.|+|++|++++..+ ..+.+|+.|++.+|++.
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC---
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCcccC
Confidence 9999999998888899999999999999998 6554333334569999999999996422 45677889999999875
No 351
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.71 E-value=1.3e-17 Score=164.88 Aligned_cols=147 Identities=20% Similarity=0.225 Sum_probs=103.4
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeec
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (618)
.+++.|++++|+++.. + .+..+++|+.|+|++|+|++..+..-.++|+.|+|++|++++ +|.. .. ++|++|+|++
T Consensus 41 ~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~L~~ 115 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLFLDN 115 (263)
T ss_dssp TTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGGGTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEECCS
T ss_pred CcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChhhccCCCCCEEECCCCccCC-cCcc-cc-CcccEEEccC
Confidence 4677788888877653 3 677788888888888888766553333778888888888875 3332 22 7788888888
Q ss_pred CCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCCccEEEccccccccc
Q 007107 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGW 238 (618)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ 238 (618)
|++++. +.+..+++|+.|+|++|+|++ ++ .+..+++|++|+|++|+|++........+|+.|+|++|++++.
T Consensus 116 N~l~~~--~~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 116 NELRDT--DSLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp SCCSBS--GGGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBCTTSTTCCCCCEEEEEEEEEECC
T ss_pred CccCCC--hhhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCcchHHhccCCCCCEEeCCCCcccCC
Confidence 888764 347778888888888888874 44 5777788888888888887762222234577888888877744
No 352
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.71 E-value=5.4e-17 Score=178.63 Aligned_cols=170 Identities=21% Similarity=0.258 Sum_probs=146.5
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeec
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (618)
.+++.|+|++|++... +.+..|++|+.|+|++|+|++..|..-.++|+.|+|++|+|++ +| .+..+++|+.|+|++
T Consensus 43 ~~L~~L~l~~n~i~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~ 118 (605)
T 1m9s_A 43 NSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKPLTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEH 118 (605)
T ss_dssp TTCCCCBCTTCCCCCC--TTGGGCTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTT
T ss_pred CCCCEEECcCCCCCCC--hHHccCCCCCEEEeeCCCCCCChhhccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecC
Confidence 5788899999999764 3689999999999999999987775555999999999999996 34 799999999999999
Q ss_pred CCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCCccEEEcccccccccCc--
Q 007107 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIP-- 240 (618)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip-- 240 (618)
|+|++. +.+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|+|++.++.....+|+.|+|++|+|++. |
T Consensus 119 N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~l-~~l 193 (605)
T 1m9s_A 119 NGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL-RAL 193 (605)
T ss_dssp SCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBC-GGG
T ss_pred CCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCCC-hHH
Confidence 999974 4589999999999999999964 67899999999999999999988744456799999999999964 4
Q ss_pred hhhhcccchhccCCcCCCCCC
Q 007107 241 RELISIRTFIYDGNSFDNGPA 261 (618)
Q Consensus 241 ~~~~~l~~l~~~~N~~~~~~~ 261 (618)
..+.+|+.|++.+|++...+.
T Consensus 194 ~~l~~L~~L~L~~N~l~~~p~ 214 (605)
T 1m9s_A 194 AGLKNLDVLELFSQECLNKPI 214 (605)
T ss_dssp TTCTTCSEEECCSEEEECCCC
T ss_pred ccCCCCCEEEccCCcCcCCcc
Confidence 245678889999999876543
No 353
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.71 E-value=8e-17 Score=172.09 Aligned_cols=163 Identities=21% Similarity=0.236 Sum_probs=82.3
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeec
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (618)
.+++.|+|++|++++. | .+..+++|++|+|++|+|++. |..-.++|++|+|++|+|++. | ++++++|++|+|++
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~ 115 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-DLSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDT 115 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-CCTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCS
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-ccccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCC
Confidence 3455566666666553 2 455566666666666665542 322235566666666665543 2 55555666666666
Q ss_pred CCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCCccEEEcccccccccCchh
Q 007107 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPRE 242 (618)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip~~ 242 (618)
|++++. | ++.+++|++|+|++|+|++ ++ ++.+++|++|++++|+..+.++.....+|+.|++++|++++.-...
T Consensus 116 N~l~~l-~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~l~l~~ 189 (457)
T 3bz5_A 116 NKLTKL-D--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITELDVSQ 189 (457)
T ss_dssp SCCSCC-C--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCCCCCTT
T ss_pred CcCCee-c--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCcccccccccCCcCCEEECCCCccceecccc
Confidence 665553 2 5555556666666655554 22 4455555555555554444333222233555555555554421122
Q ss_pred hhcccchhccCCcCC
Q 007107 243 LISIRTFIYDGNSFD 257 (618)
Q Consensus 243 ~~~l~~l~~~~N~~~ 257 (618)
+.+|+.|++.+|.+.
T Consensus 190 l~~L~~L~l~~N~l~ 204 (457)
T 3bz5_A 190 NKLLNRLNCDTNNIT 204 (457)
T ss_dssp CTTCCEEECCSSCCS
T ss_pred CCCCCEEECcCCcCC
Confidence 333444444444443
No 354
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.71 E-value=7.1e-17 Score=151.54 Aligned_cols=123 Identities=24% Similarity=0.408 Sum_probs=79.7
Q ss_pred EeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCC
Q 007107 112 FDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSG 191 (618)
Q Consensus 112 L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g 191 (618)
+++++|.++ .+|..++++|+.|+|++|+|+ .+|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|+|++
T Consensus 15 l~~~~~~l~-~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~ 92 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRC 92 (193)
T ss_dssp EECTTSCCS-SCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCB
T ss_pred EEcCCCCCC-cCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCE
Confidence 344444444 445555566666666666666 566677777777777777777777766777777777777777777776
Q ss_pred CCCCCcccCCCcCeeeeccccccccccc-cCC-CCccEEEccccccc
Q 007107 192 DLPNSFISLSNISSLYLQNNQVTGSLNV-FSG-LPLTTLNVANNHFS 236 (618)
Q Consensus 192 ~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~-~~L~~L~l~~N~l~ 236 (618)
..|..|..+++|++|+|++|+|++.++. +.. .+|+.|+|++|.+.
T Consensus 93 i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 93 IPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred eCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 6666677777777777777777765443 222 24666666666664
No 355
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.70 E-value=2.2e-17 Score=151.40 Aligned_cols=131 Identities=22% Similarity=0.258 Sum_probs=80.4
Q ss_pred CCEEEEEcCCCCCc-ccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEE
Q 007107 83 SAVVSIDISGLGLS-GTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (618)
Q Consensus 83 ~~v~~l~l~~~~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (618)
.+++.|+|++|+++ +.+|..+..+++|++|+|++|.|++. ..+. ++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 35666777777776 56666666777777777777776654 2222 5666666666666655666666666666666
Q ss_pred eecCCCCCch-hhhhcCCCCCCeEEcccCcCCCCCC---CCcccCCCcCeeeeccccccc
Q 007107 160 VSRNSLTQSI-GDIFGNLAGLATLDLSFNNFSGDLP---NSFISLSNISSLYLQNNQVTG 215 (618)
Q Consensus 160 L~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~g~~p---~~~~~l~~L~~L~l~~N~l~~ 215 (618)
|++|++++.. +..+..+++|+.|+|++|.+++..+ ..+..+++|++|++++|.++.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 6666666542 2556666666666666666663322 255566666666666666554
No 356
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.70 E-value=6.2e-17 Score=166.81 Aligned_cols=169 Identities=20% Similarity=0.266 Sum_probs=127.0
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeec
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (618)
..++.|++++|.+.+..+ +..+++|+.|+|++|.+++..+....++|+.|++++|++++..+ +..+++|++|+|++
T Consensus 155 ~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~ 230 (347)
T 4fmz_A 155 TGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGN 230 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCS
T ss_pred CCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccccccccCCCccceeecccCCCCCCch--hhcCCcCCEEEccC
Confidence 468888888888876654 78888888888888888865554444788888888888886544 77888888888888
Q ss_pred CCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCCccEEEcccccccccCchh
Q 007107 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIPRE 242 (618)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip~~ 242 (618)
|++++..+ +..+++|+.|+|++|.+++ + ..+..+++|++|++++|++++........+|+.|+|++|++++..|..
T Consensus 231 n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 306 (347)
T 4fmz_A 231 NKITDLSP--LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDISVLNNLSQLNSLFLNNNQLGNEDMEV 306 (347)
T ss_dssp SCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCGGGHHH
T ss_pred CccCCCcc--hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCChhhcCCCCCCEEECcCCcCCCcChhH
Confidence 88886655 7788888888888888874 3 357778888888888888887533233345888888888888777765
Q ss_pred h---hcccchhccCCcCCCC
Q 007107 243 L---ISIRTFIYDGNSFDNG 259 (618)
Q Consensus 243 ~---~~l~~l~~~~N~~~~~ 259 (618)
+ .+|+.|++.+|++...
T Consensus 307 l~~l~~L~~L~L~~n~l~~~ 326 (347)
T 4fmz_A 307 IGGLTNLTTLFLSQNHITDI 326 (347)
T ss_dssp HHTCTTCSEEECCSSSCCCC
T ss_pred hhccccCCEEEccCCccccc
Confidence 4 4566777888877654
No 357
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.70 E-value=3.2e-17 Score=153.96 Aligned_cols=125 Identities=26% Similarity=0.269 Sum_probs=109.9
Q ss_pred EEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEeecCC
Q 007107 87 SIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNS 164 (618)
Q Consensus 87 ~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 164 (618)
.+++++|+|+. +|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 14 ~l~~~~~~l~~-ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLKV-LPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCCc-CCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 45667777764 455443 68999999999998 6776665 899999999999998888899999999999999999
Q ss_pred CCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccc
Q 007107 165 LTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTG 215 (618)
Q Consensus 165 l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 215 (618)
|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 999999999999999999999999996556678999999999999999975
No 358
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.70 E-value=9.1e-17 Score=172.59 Aligned_cols=169 Identities=24% Similarity=0.337 Sum_probs=136.3
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeec
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (618)
..++.|++++|.+.+. +.+..+++|++|+|++|.+++..|....++|+.|+|++|++++. ..+..+++|++|+|++
T Consensus 177 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~ 252 (466)
T 1o6v_A 177 TTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLAN 252 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCS
T ss_pred CCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCcccccccccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCC
Confidence 4688888988888765 35888899999999999998877766668899999999988854 4678889999999999
Q ss_pred CCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCCccEEEcccccccccCc-h
Q 007107 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIP-R 241 (618)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip-~ 241 (618)
|++++..+ +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++..+.....+|+.|+|++|++++..| .
T Consensus 253 n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 328 (466)
T 1o6v_A 253 NQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVS 328 (466)
T ss_dssp SCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGGGG
T ss_pred Cccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCchhhc
Confidence 99987766 7888999999999999985443 78888999999999998887664444568999999999987666 3
Q ss_pred hhhcccchhccCCcCCCC
Q 007107 242 ELISIRTFIYDGNSFDNG 259 (618)
Q Consensus 242 ~~~~l~~l~~~~N~~~~~ 259 (618)
.+.+|+.|++.+|.+...
T Consensus 329 ~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 329 SLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp GCTTCCEEECCSSCCCCC
T ss_pred cCccCCEeECCCCccCCc
Confidence 456778888888887653
No 359
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.70 E-value=1.1e-16 Score=148.18 Aligned_cols=131 Identities=20% Similarity=0.261 Sum_probs=117.6
Q ss_pred CCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCc
Q 007107 109 LRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNN 188 (618)
Q Consensus 109 L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 188 (618)
.+.+++++|+++ .+|..+.++|+.|+|++|++++..+..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 87 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCEEEecCCCCc-cCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCC
Confidence 578999999998 6788888999999999999998777788999999999999999998888889999999999999999
Q ss_pred CCCCCCCCcccCCCcCeeeecccccccccccc-C-CCCccEEEcccccccccCc
Q 007107 189 FSGDLPNSFISLSNISSLYLQNNQVTGSLNVF-S-GLPLTTLNVANNHFSGWIP 240 (618)
Q Consensus 189 l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~-~~~L~~L~l~~N~l~g~ip 240 (618)
|++..+..+..+++|++|+|++|+|++.++.. . ..+|+.|+|++|++++..|
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 88 LQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99777777899999999999999999876653 3 3469999999999998765
No 360
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.70 E-value=4.8e-17 Score=149.13 Aligned_cols=134 Identities=22% Similarity=0.187 Sum_probs=111.8
Q ss_pred CCCCCCEEeecCCCCC-CCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCe
Q 007107 105 DLLSLRKFDLSGNSIH-DTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLAT 181 (618)
Q Consensus 105 ~l~~L~~L~L~~N~l~-~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 181 (618)
..++|+.|+|++|.++ +.+|..+. ++|+.|+|++|++++. ..+..+++|++|+|++|++++.+|..+..+++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 4578999999999998 77887654 8999999999999966 78889999999999999999888888888999999
Q ss_pred EEcccCcCCCCC-CCCcccCCCcCeeeecccccccccc----ccCC-CCccEEEcccccccccCch
Q 007107 182 LDLSFNNFSGDL-PNSFISLSNISSLYLQNNQVTGSLN----VFSG-LPLTTLNVANNHFSGWIPR 241 (618)
Q Consensus 182 L~l~~N~l~g~~-p~~~~~l~~L~~L~l~~N~l~~~~~----~~~~-~~L~~L~l~~N~l~g~ip~ 241 (618)
|+|++|+|++.. +..+..+++|++|+|++|++++.++ .+.. .+|+.|++++|.+. .+|+
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 999999998532 2678899999999999999998766 3443 45999999999887 5554
No 361
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.69 E-value=1.2e-16 Score=164.58 Aligned_cols=167 Identities=23% Similarity=0.332 Sum_probs=102.2
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeec
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (618)
.+++.|++++|.....++. +..+++|++|++++|.+.+..+..-.++|+.|++++|++++..+ +..+++|+.|++++
T Consensus 132 ~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~ 208 (347)
T 4fmz_A 132 TKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYV 208 (347)
T ss_dssp TTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred CceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchhhccCCCCCEEEccCCccccccc--ccCCCccceeeccc
Confidence 3566677776654443333 66677777777777776655443334667777777777664322 66667777777777
Q ss_pred CCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCCccEEEcccccccccCc--
Q 007107 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIP-- 240 (618)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip-- 240 (618)
|.+++..+ +..+++|+.|+|++|++++ ++. +..+++|++|++++|++++........+|+.|++++|++++. |
T Consensus 209 n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~-~~~ 283 (347)
T 4fmz_A 209 NQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDI-SVL 283 (347)
T ss_dssp SCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC-GGG
T ss_pred CCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCCChhHhcCCCcCEEEccCCccCCC-hhh
Confidence 77765544 6666777777777777763 332 666677777777777766542222233477777777776643 3
Q ss_pred hhhhcccchhccCCcCC
Q 007107 241 RELISIRTFIYDGNSFD 257 (618)
Q Consensus 241 ~~~~~l~~l~~~~N~~~ 257 (618)
..+.+|+.|++.+|++.
T Consensus 284 ~~l~~L~~L~L~~n~l~ 300 (347)
T 4fmz_A 284 NNLSQLNSLFLNNNQLG 300 (347)
T ss_dssp GGCTTCSEEECCSSCCC
T ss_pred cCCCCCCEEECcCCcCC
Confidence 23455666666666654
No 362
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.69 E-value=1.7e-16 Score=169.52 Aligned_cols=163 Identities=20% Similarity=0.241 Sum_probs=132.9
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeec
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (618)
.+++.|+|++|++++. + ++++++|++|+|++|++++ +|..-.++|++|+|++|+|++. + ++.+++|++|++++
T Consensus 85 ~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~ 157 (457)
T 3bz5_A 85 TNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LDVSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHL 157 (457)
T ss_dssp TTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CCCTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTT
T ss_pred CCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ecCCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCC
Confidence 5799999999999985 3 8999999999999999997 5644458999999999999974 3 88899999999999
Q ss_pred CCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCCccEEEcccccccccCc-h
Q 007107 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIP-R 241 (618)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip-~ 241 (618)
|+..+.+ .++.+++|+.|+|++|+|++ +| +..+++|+.|++++|+|++. +.....+|+.|+|++|++++ +| .
T Consensus 158 n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~l~~l~~L~~L~Ls~N~l~~-ip~~ 230 (457)
T 3bz5_A 158 NKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL-DLNQNIQLTFLDCSSNKLTE-IDVT 230 (457)
T ss_dssp CSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-CCTTCTTCSEEECCSSCCSC-CCCT
T ss_pred CCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee-ccccCCCCCEEECcCCcccc-cCcc
Confidence 9766666 47788999999999999985 55 77888899999999988875 33333568889999998887 45 4
Q ss_pred hhhcccchhccCCcCCCC
Q 007107 242 ELISIRTFIYDGNSFDNG 259 (618)
Q Consensus 242 ~~~~l~~l~~~~N~~~~~ 259 (618)
.+.+|+.|++++|.+...
T Consensus 231 ~l~~L~~L~l~~N~l~~~ 248 (457)
T 3bz5_A 231 PLTQLTYFDCSVNPLTEL 248 (457)
T ss_dssp TCTTCSEEECCSSCCSCC
T ss_pred ccCCCCEEEeeCCcCCCc
Confidence 456777888888887764
No 363
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.69 E-value=1.2e-18 Score=182.54 Aligned_cols=178 Identities=19% Similarity=0.237 Sum_probs=141.1
Q ss_pred CCCEEEEEcCCCCCcc----cccccccCCCCCCEEeecCCCCCCCCCCCCC---------------CCcceEeccccccc
Q 007107 82 GSAVVSIDISGLGLSG----TMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP---------------PNLTSLNLASNNFS 142 (618)
Q Consensus 82 ~~~v~~l~l~~~~l~~----~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~---------------~~L~~L~L~~N~l~ 142 (618)
..+++.|+|++|.+.+ .++..+..+++|++|+|++|.|++..+..+. ++|++|+|++|+++
T Consensus 93 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~ 172 (386)
T 2ca6_A 93 CPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLE 172 (386)
T ss_dssp CTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCT
T ss_pred CCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCC
Confidence 4678899999999987 5778888899999999999988744333332 68999999999998
Q ss_pred -ccCC---cccccCCCccEEEeecCCCC--C---chhhhhcCCCCCCeEEcccCcCC----CCCCCCcccCCCcCeeeec
Q 007107 143 -GNLP---YSIASMVSLSYLNVSRNSLT--Q---SIGDIFGNLAGLATLDLSFNNFS----GDLPNSFISLSNISSLYLQ 209 (618)
Q Consensus 143 -~~~p---~~~~~l~~L~~L~L~~N~l~--~---~~p~~~~~l~~L~~L~l~~N~l~----g~~p~~~~~l~~L~~L~l~ 209 (618)
+.+| ..+..+++|++|+|++|+++ | .+|..+..+++|+.|+|++|.|+ +.+|..+..+++|++|+|+
T Consensus 173 ~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~ 252 (386)
T 2ca6_A 173 NGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLN 252 (386)
T ss_dssp GGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECT
T ss_pred cHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECC
Confidence 4555 46778899999999999998 3 45557888999999999999995 5778888889999999999
Q ss_pred ccccccc----ccc-c---CCCCccEEEcccccccc----cCchhh----hcccchhccCCcCCCC
Q 007107 210 NNQVTGS----LNV-F---SGLPLTTLNVANNHFSG----WIPREL----ISIRTFIYDGNSFDNG 259 (618)
Q Consensus 210 ~N~l~~~----~~~-~---~~~~L~~L~l~~N~l~g----~ip~~~----~~l~~l~~~~N~~~~~ 259 (618)
+|+|++. ++. + ...+|+.|+|++|.+++ .+|..+ .+|+.|++.+|++...
T Consensus 253 ~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 253 DCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp TCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred CCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 9999874 222 2 24569999999999997 477655 6778888999888753
No 364
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.69 E-value=1.2e-16 Score=157.87 Aligned_cols=167 Identities=22% Similarity=0.263 Sum_probs=133.3
Q ss_pred EEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeecCC
Q 007107 85 VVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNS 164 (618)
Q Consensus 85 v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 164 (618)
++.++++++++++.. .+..+++|+.|+|++|.|+..-.....++|+.|+|++|+|++..+ +..+++|++|+|++|+
T Consensus 21 l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l~~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~ 96 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSLAGMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNR 96 (263)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSC
T ss_pred HHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccchHHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCc
Confidence 455677888887654 688999999999999999853322233899999999999996544 9999999999999999
Q ss_pred CCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCCccEEEcccccccccCc-hhh
Q 007107 165 LTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHFSGWIP-REL 243 (618)
Q Consensus 165 l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip-~~~ 243 (618)
+++.. . +.. ++|+.|+|++|+|++ ++ .+..+++|++|+|++|+|++........+|+.|+|++|++++.-. ..+
T Consensus 97 l~~l~-~-~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~~~l~~l 171 (263)
T 1xeu_A 97 LKNLN-G-IPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNTGGLTRL 171 (263)
T ss_dssp CSCCT-T-CCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBCTTSTTC
T ss_pred cCCcC-c-ccc-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcchHHhccC
Confidence 99743 3 233 899999999999995 44 588999999999999999986543444569999999999997611 345
Q ss_pred hcccchhccCCcCCCCC
Q 007107 244 ISIRTFIYDGNSFDNGP 260 (618)
Q Consensus 244 ~~l~~l~~~~N~~~~~~ 260 (618)
.+|+.|++.+|++.+.+
T Consensus 172 ~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 172 KKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp CCCCEEEEEEEEEECCC
T ss_pred CCCCEEeCCCCcccCCc
Confidence 67788899999998764
No 365
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.68 E-value=3.6e-17 Score=146.81 Aligned_cols=125 Identities=22% Similarity=0.228 Sum_probs=88.6
Q ss_pred CCEEEEEcCCCCCc-ccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEE
Q 007107 83 SAVVSIDISGLGLS-GTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLN 159 (618)
Q Consensus 83 ~~v~~l~l~~~~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (618)
.+++.|++++|+++ +.+|..+..+++|+.|+|++|.+++. ..+. ++|++|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 35777788888777 67777777778888888888877765 2232 6777777777777766777777777777777
Q ss_pred eecCCCCCc-hhhhhcCCCCCCeEEcccCcCCCCCC---CCcccCCCcCeeeec
Q 007107 160 VSRNSLTQS-IGDIFGNLAGLATLDLSFNNFSGDLP---NSFISLSNISSLYLQ 209 (618)
Q Consensus 160 L~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~g~~p---~~~~~l~~L~~L~l~ 209 (618)
|++|++++. .+..++.+++|+.|++++|.+++..+ ..+..+++|++|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 777777764 34667777777777777777774433 356677777777765
No 366
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.68 E-value=2.4e-17 Score=176.04 Aligned_cols=161 Identities=22% Similarity=0.254 Sum_probs=94.7
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCC-------------CEEeecCCCCCCCCCCCCCCCcceEecccccccccCCccc
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSL-------------RKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSI 149 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L-------------~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~ 149 (618)
.+++.|++++|++.|.+|..++++++| ++|++++|.+++ +|. +.++|+.|+|++|++++ +|..
T Consensus 34 ~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~-~~~~L~~L~l~~n~l~~-lp~~- 109 (454)
T 1jl5_A 34 KSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE-LPPHLESLVASCNSLTE-LPEL- 109 (454)
T ss_dssp CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCS-CCTTCSEEECCSSCCSS-CCCC-
T ss_pred cchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCC-CcCCCCEEEccCCcCCc-cccc-
Confidence 345555566666666666666555543 566666666553 232 34667777777777775 5543
Q ss_pred ccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCCccEEE
Q 007107 150 ASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLN 229 (618)
Q Consensus 150 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~ 229 (618)
+++|++|++++|++++. |.. .++|++|+|++|++++ +| .|+.+++|++|++++|++++.+... .+|+.|+
T Consensus 110 --~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~lp~~~--~~L~~L~ 179 (454)
T 1jl5_A 110 --PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKLPDLP--PSLEFIA 179 (454)
T ss_dssp --CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCCCCCC--TTCCEEE
T ss_pred --cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcccCCCc--ccccEEE
Confidence 35666666666666642 111 1567777777777774 66 4777777777777777777632211 2567777
Q ss_pred cccccccccCch--hhhcccchhccCCcCCC
Q 007107 230 VANNHFSGWIPR--ELISIRTFIYDGNSFDN 258 (618)
Q Consensus 230 l~~N~l~g~ip~--~~~~l~~l~~~~N~~~~ 258 (618)
+++|++++ +|. .+.+|+.|++++|.+..
T Consensus 180 L~~n~l~~-l~~~~~l~~L~~L~l~~N~l~~ 209 (454)
T 1jl5_A 180 AGNNQLEE-LPELQNLPFLTAIYADNNSLKK 209 (454)
T ss_dssp CCSSCCSS-CCCCTTCTTCCEEECCSSCCSS
T ss_pred CcCCcCCc-CccccCCCCCCEEECCCCcCCc
Confidence 77777665 442 23444556666666553
No 367
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.67 E-value=6.2e-17 Score=178.39 Aligned_cols=176 Identities=22% Similarity=0.351 Sum_probs=119.4
Q ss_pred CCCCCCCCCCCCCCCCCcee--------EeeCCCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCCCC
Q 007107 59 VLTNWKGNEGDPCGESWKGV--------ACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPN 130 (618)
Q Consensus 59 ~~~~w~~~~~~~c~~~w~gv--------~c~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~ 130 (618)
.+.+|... .++| .|+|. .|....++.|++++|+|+ .+|..+. ++|+.|+|++|+|+ .+|. ..++
T Consensus 11 ~w~~W~~~-~~~~--~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~-~l~~ 82 (622)
T 3g06_A 11 VWSAWRRA-APAE--ESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA-LPPE 82 (622)
T ss_dssp HHHHHHHT-CCGG--GHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC-CCTT
T ss_pred HHHHHHhc-CCcc--hhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC-cCCC
Confidence 34567532 2444 68654 344457889999999998 5676665 78999999999998 5665 5689
Q ss_pred cceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeecc
Q 007107 131 LTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQN 210 (618)
Q Consensus 131 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 210 (618)
|++|+|++|+|+ .+|. .+++|++|+|++|+|++..+ .+++|+.|+|++|+|+ .+|.. +++|++|+|++
T Consensus 83 L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~l~~----~l~~L~~L~L~~N~l~-~lp~~---l~~L~~L~Ls~ 150 (622)
T 3g06_A 83 LRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTHLPA----LPSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSD 150 (622)
T ss_dssp CCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCCCCC----CCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCS
T ss_pred CCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCCCCC----CCCCcCEEECCCCCCC-cCCCC---CCCCCEEECcC
Confidence 999999999998 4665 67889999999999886433 5678888888888887 46654 36788888888
Q ss_pred ccccccccccCCCCccEEEcccccccccCchhhhcccchhccCCcCC
Q 007107 211 NQVTGSLNVFSGLPLTTLNVANNHFSGWIPRELISIRTFIYDGNSFD 257 (618)
Q Consensus 211 N~l~~~~~~~~~~~L~~L~l~~N~l~g~ip~~~~~l~~l~~~~N~~~ 257 (618)
|+|++.... ..+|+.|+|++|.|++ +|..+.+|+.|++++|.+.
T Consensus 151 N~l~~l~~~--~~~L~~L~L~~N~l~~-l~~~~~~L~~L~Ls~N~l~ 194 (622)
T 3g06_A 151 NQLASLPAL--PSELCKLWAYNNQLTS-LPMLPSGLQELSVSDNQLA 194 (622)
T ss_dssp SCCSCCCCC--CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCS
T ss_pred CcCCCcCCc--cCCCCEEECCCCCCCC-CcccCCCCcEEECCCCCCC
Confidence 887764321 1235555555555542 4444444444555544443
No 368
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.66 E-value=1.4e-16 Score=163.02 Aligned_cols=140 Identities=14% Similarity=0.117 Sum_probs=99.1
Q ss_pred CCcccceeccCccceEEEEEEcCCcEEEEEEcCccccc---------------HHHH-----HHHHHHHHHhhcCCCCcc
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALS---------------LQEE-----DNFLEAVSNMSRLRHPNI 470 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---------------~~~~-----~~~~~e~~~l~~l~h~ni 470 (618)
-|.+...||+|++|.||+|...+|+.||||+++..... .... .....|...+.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 38889999999999999999999999999987532111 0000 111234555555544333
Q ss_pred cccceEEeeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecC
Q 007107 471 VTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDD 550 (618)
Q Consensus 471 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~ 550 (618)
.-..-+.. ...++||||+++++|.++... .....++.|++.+|.|||+. |||||||||.|||+++
T Consensus 176 ~vp~p~~~--~~~~LVME~i~G~~L~~l~~~----------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 176 PVPEPIAQ--SRHTIVMSLVDALPMRQVSSV----------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIRE 240 (397)
T ss_dssp SCCCEEEE--ETTEEEEECCSCEEGGGCCCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEE
T ss_pred CCCeeeec--cCceEEEEecCCccHhhhccc----------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeC
Confidence 21111111 234799999999888765421 12356789999999999998 9999999999999987
Q ss_pred CCC----------cEEeeccccccC
Q 007107 551 ELN----------PHLSDCGLAALT 565 (618)
Q Consensus 551 ~~~----------~kl~Dfgl~~~~ 565 (618)
++. +.|+||+-+...
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCCcccccccccceEEEEeCCcccC
Confidence 763 789999987544
No 369
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=1.7e-16 Score=142.35 Aligned_cols=125 Identities=20% Similarity=0.178 Sum_probs=96.2
Q ss_pred CCCCCCEEeecCCCCC-CCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCe
Q 007107 105 DLLSLRKFDLSGNSIH-DTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLAT 181 (618)
Q Consensus 105 ~l~~L~~L~L~~N~l~-~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 181 (618)
..++|+.|+|++|.++ +.+|..+. ++|+.|+|++|++++. ..+..+++|++|+|++|++++.+|..+..+++|+.
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3467888888888888 77776554 7888888888888865 77888888888888888888878888888888888
Q ss_pred EEcccCcCCCC-CCCCcccCCCcCeeeecccccccccc----ccC-CCCccEEEcc
Q 007107 182 LDLSFNNFSGD-LPNSFISLSNISSLYLQNNQVTGSLN----VFS-GLPLTTLNVA 231 (618)
Q Consensus 182 L~l~~N~l~g~-~p~~~~~l~~L~~L~l~~N~l~~~~~----~~~-~~~L~~L~l~ 231 (618)
|+|++|++++. .+..+..+++|++|++++|++++..+ .+. ..+|+.||++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 88888888852 34678888888888888888887654 222 2357777665
No 370
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.64 E-value=5.1e-18 Score=185.69 Aligned_cols=151 Identities=18% Similarity=0.183 Sum_probs=101.9
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeecCCC-------------CCCCCCCCCC----------------------
Q 007107 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNS-------------IHDTIPYQLP---------------------- 128 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~-------------l~~~~p~~~~---------------------- 128 (618)
+++.|+|++|+|. .+|..+++|++|+.|++++|. +.+.+|..+.
T Consensus 350 ~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L~~l 428 (567)
T 1dce_A 350 QLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSK 428 (567)
T ss_dssp TSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred cceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchhhhh
Confidence 4556788888885 678889999999999987764 4444442211
Q ss_pred ------------CCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCC
Q 007107 129 ------------PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNS 196 (618)
Q Consensus 129 ------------~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~ 196 (618)
..|+.|+|++|+|++ +|. ++.+++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .
T Consensus 429 ~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~ 503 (567)
T 1dce_A 429 FLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-G 503 (567)
T ss_dssp HHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-G
T ss_pred hhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-c
Confidence 246667777777774 454 777777777777777777 566677777777777777777774 56 6
Q ss_pred cccCCCcCeeeeccccccccc--cccCC-CCccEEEcccccccccCc
Q 007107 197 FISLSNISSLYLQNNQVTGSL--NVFSG-LPLTTLNVANNHFSGWIP 240 (618)
Q Consensus 197 ~~~l~~L~~L~l~~N~l~~~~--~~~~~-~~L~~L~l~~N~l~g~ip 240 (618)
++.+++|++|+|++|+|++.+ ..+.. .+|+.|+|++|+|++..|
T Consensus 504 l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 504 VANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp GTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred cCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 677777777777777777653 33333 347777777777775544
No 371
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.64 E-value=3.2e-17 Score=184.86 Aligned_cols=153 Identities=24% Similarity=0.177 Sum_probs=121.0
Q ss_pred EcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEeecCCCC
Q 007107 89 DISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLT 166 (618)
Q Consensus 89 ~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 166 (618)
++..|.+. ..+..+..++.|+.|+|++|.|. .+|..+. ++|++|+|++|+|+ .+|..|++|++|++|+|++|+|+
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC
Confidence 33333333 45778999999999999999999 6776654 89999999999999 89999999999999999999999
Q ss_pred CchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCC-C--CccEEEcccccccccCchhh
Q 007107 167 QSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSG-L--PLTTLNVANNHFSGWIPREL 243 (618)
Q Consensus 167 ~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~--~L~~L~l~~N~l~g~ip~~~ 243 (618)
.+|..|++|++|++|+|++|.|+ .+|..|+.+++|++|+|++|+|++.++.... . .+..|+|++|.++|.+|..+
T Consensus 284 -~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l 361 (727)
T 4b8c_D 284 -SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHER 361 (727)
T ss_dssp -SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-
T ss_pred -ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcccc
Confidence 77999999999999999999998 8999999999999999999999997765332 2 23458899999999999876
Q ss_pred hcc
Q 007107 244 ISI 246 (618)
Q Consensus 244 ~~l 246 (618)
..+
T Consensus 362 ~~l 364 (727)
T 4b8c_D 362 RFI 364 (727)
T ss_dssp ---
T ss_pred cee
Confidence 554
No 372
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.64 E-value=9.1e-16 Score=140.83 Aligned_cols=107 Identities=24% Similarity=0.356 Sum_probs=88.1
Q ss_pred CEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcC
Q 007107 110 RKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNF 189 (618)
Q Consensus 110 ~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 189 (618)
+.|++++|.|+ .+|..+.++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l 90 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL 90 (170)
T ss_dssp TEEECTTSCCS-SCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CEEEeCCCCcC-ccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCcc
Confidence 34555666665 46666678888888888888888888899999999999999999988888889999999999999999
Q ss_pred CCCCCCCcccCCCcCeeeeccccccccc
Q 007107 190 SGDLPNSFISLSNISSLYLQNNQVTGSL 217 (618)
Q Consensus 190 ~g~~p~~~~~l~~L~~L~l~~N~l~~~~ 217 (618)
++..+..|..+++|++|+|++|+++...
T Consensus 91 ~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 91 KSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 9666667888999998888888887543
No 373
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.63 E-value=3.3e-17 Score=169.91 Aligned_cols=176 Identities=22% Similarity=0.279 Sum_probs=124.0
Q ss_pred CCEEEEEcCCCCCccccc----ccccCCC-CCCEEeecCCCCCCCCCCCC-------CCCcceEecccccccccCCcccc
Q 007107 83 SAVVSIDISGLGLSGTMG----YLLSDLL-SLRKFDLSGNSIHDTIPYQL-------PPNLTSLNLASNNFSGNLPYSIA 150 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~----~~l~~l~-~L~~L~L~~N~l~~~~p~~~-------~~~L~~L~L~~N~l~~~~p~~~~ 150 (618)
..++.|+|++|.+++..+ ..+..++ +|++|+|++|.|++..+..+ .++|++|+|++|++++..+..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 458888888888887766 6777787 78888888888886655333 26788888888888877666544
Q ss_pred c----C-CCccEEEeecCCCCCchhhhhc----C-CCCCCeEEcccCcCCCCCCC----CcccCC-CcCeeeeccccccc
Q 007107 151 S----M-VSLSYLNVSRNSLTQSIGDIFG----N-LAGLATLDLSFNNFSGDLPN----SFISLS-NISSLYLQNNQVTG 215 (618)
Q Consensus 151 ~----l-~~L~~L~L~~N~l~~~~p~~~~----~-l~~L~~L~l~~N~l~g~~p~----~~~~l~-~L~~L~l~~N~l~~ 215 (618)
. + ++|++|+|++|++++..+..+. . .++|++|+|++|+|++..+. .+..++ +|++|+|++|+|++
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 181 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLAS 181 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCch
Confidence 3 3 7888888888888876665443 3 35888888888888754333 334444 88888888888876
Q ss_pred ccc-----ccCC--CCccEEEccccccccc----Cchhh----hcccchhccCCcCCC
Q 007107 216 SLN-----VFSG--LPLTTLNVANNHFSGW----IPREL----ISIRTFIYDGNSFDN 258 (618)
Q Consensus 216 ~~~-----~~~~--~~L~~L~l~~N~l~g~----ip~~~----~~l~~l~~~~N~~~~ 258 (618)
..+ .+.. .+|+.|+|++|.|++. ++..+ .+|+.|++++|.+..
T Consensus 182 ~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 239 (362)
T 3goz_A 182 KNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHG 239 (362)
T ss_dssp SCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCC
T ss_pred hhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCc
Confidence 543 1111 3688888888888762 44444 357788888887654
No 374
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.62 E-value=2.8e-15 Score=165.25 Aligned_cols=34 Identities=21% Similarity=0.402 Sum_probs=23.0
Q ss_pred CccEEEcccccccccCchhhhcccchhccCCcCCC
Q 007107 224 PLTTLNVANNHFSGWIPRELISIRTFIYDGNSFDN 258 (618)
Q Consensus 224 ~L~~L~l~~N~l~g~ip~~~~~l~~l~~~~N~~~~ 258 (618)
+|+.|+|++|+|++ +|..+.+|+.|++++|.+..
T Consensus 222 ~L~~L~Ls~N~L~~-lp~~l~~L~~L~Ls~N~L~~ 255 (622)
T 3g06_A 222 GLKELIVSGNRLTS-LPVLPSELKELMVSGNRLTS 255 (622)
T ss_dssp TCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSC
T ss_pred CCCEEEccCCccCc-CCCCCCcCcEEECCCCCCCc
Confidence 46777777777774 66666677777777776654
No 375
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.62 E-value=1.7e-17 Score=170.25 Aligned_cols=170 Identities=16% Similarity=0.227 Sum_probs=80.3
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCC-CCCCCC--CCcceEecccccccccCCcccccCCCccEEEe
Q 007107 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDT-IPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~-~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 160 (618)
+++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+. ++|++|+|++|++++..|..++.+++|++|+|
T Consensus 71 ~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L 149 (336)
T 2ast_B 71 GVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNL 149 (336)
T ss_dssp TCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEEC
T ss_pred cceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEEC
Confidence 445555555555544333 33455555555555555433 332222 45555555555555555555555555555555
Q ss_pred ecC-CCCCc-hhhhhcCCCCCCeEEcccC-cCCCC-CCCCcccCC-CcCeeeeccc--ccc-ccccc-c-CCCCccEEEc
Q 007107 161 SRN-SLTQS-IGDIFGNLAGLATLDLSFN-NFSGD-LPNSFISLS-NISSLYLQNN--QVT-GSLNV-F-SGLPLTTLNV 230 (618)
Q Consensus 161 ~~N-~l~~~-~p~~~~~l~~L~~L~l~~N-~l~g~-~p~~~~~l~-~L~~L~l~~N--~l~-~~~~~-~-~~~~L~~L~l 230 (618)
++| .+++. ++..+.++++|+.|+|++| ++++. ++..+..++ +|++|+|++| .++ +.++. + ...+|+.|+|
T Consensus 150 ~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l 229 (336)
T 2ast_B 150 SGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDL 229 (336)
T ss_dssp TTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEEC
T ss_pred CCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeC
Confidence 555 44432 4444555555555555555 55432 344444555 5555555555 233 11111 1 1223555555
Q ss_pred cccc-ccccCchhh---hcccchhccCC
Q 007107 231 ANNH-FSGWIPREL---ISIRTFIYDGN 254 (618)
Q Consensus 231 ~~N~-l~g~ip~~~---~~l~~l~~~~N 254 (618)
++|. +++..+..+ .+|+.|++.+|
T Consensus 230 ~~~~~l~~~~~~~l~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 230 SDSVMLKNDCFQEFFQLNYLQHLSLSRC 257 (336)
T ss_dssp TTCTTCCGGGGGGGGGCTTCCEEECTTC
T ss_pred CCCCcCCHHHHHHHhCCCCCCEeeCCCC
Confidence 5555 444444333 23344444444
No 376
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.62 E-value=5.1e-17 Score=170.09 Aligned_cols=176 Identities=21% Similarity=0.217 Sum_probs=109.3
Q ss_pred CCEEEEEcCCC---CCcccccccc-------cCCCCCCEEeecCCCCCC----CCCCCCC--CCcceEecccccccccCC
Q 007107 83 SAVVSIDISGL---GLSGTMGYLL-------SDLLSLRKFDLSGNSIHD----TIPYQLP--PNLTSLNLASNNFSGNLP 146 (618)
Q Consensus 83 ~~v~~l~l~~~---~l~~~~~~~l-------~~l~~L~~L~L~~N~l~~----~~p~~~~--~~L~~L~L~~N~l~~~~p 146 (618)
.+++.|+|++| ++.+.+|..+ ..+++|++|+|++|.|++ .+|..+. ++|++|+|++|+|++..+
T Consensus 60 ~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~ 139 (386)
T 2ca6_A 60 KDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAG 139 (386)
T ss_dssp TTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHH
T ss_pred CCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHH
Confidence 45677777764 4445555444 567777777777777775 2333333 677777777777764433
Q ss_pred cccc----cC---------CCccEEEeecCCCC-Cchh---hhhcCCCCCCeEEcccCcCC--C---CCCCCcccCCCcC
Q 007107 147 YSIA----SM---------VSLSYLNVSRNSLT-QSIG---DIFGNLAGLATLDLSFNNFS--G---DLPNSFISLSNIS 204 (618)
Q Consensus 147 ~~~~----~l---------~~L~~L~L~~N~l~-~~~p---~~~~~l~~L~~L~l~~N~l~--g---~~p~~~~~l~~L~ 204 (618)
..+. .+ ++|++|+|++|+++ +.++ ..+..+++|+.|+|++|+|+ | .+|..+..+++|+
T Consensus 140 ~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~ 219 (386)
T 2ca6_A 140 AKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELK 219 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCC
T ss_pred HHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCcc
Confidence 3333 33 67777777777776 3444 45666777777777777776 2 3444666777777
Q ss_pred eeeecccccc----ccccc-c-CCCCccEEEccccccccc----Cchh-----hhcccchhccCCcCCC
Q 007107 205 SLYLQNNQVT----GSLNV-F-SGLPLTTLNVANNHFSGW----IPRE-----LISIRTFIYDGNSFDN 258 (618)
Q Consensus 205 ~L~l~~N~l~----~~~~~-~-~~~~L~~L~l~~N~l~g~----ip~~-----~~~l~~l~~~~N~~~~ 258 (618)
+|+|++|.|+ +.++. + ...+|+.|+|++|.|++. +|.. +.+|+.|++++|.+..
T Consensus 220 ~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 220 VLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp EEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred EEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCH
Confidence 7777777775 33322 2 223477777777777654 4444 3456677777776654
No 377
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.62 E-value=2.2e-15 Score=138.74 Aligned_cols=107 Identities=23% Similarity=0.317 Sum_probs=86.7
Q ss_pred CEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcC
Q 007107 110 RKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNF 189 (618)
Q Consensus 110 ~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 189 (618)
+.+++++|+++ .+|..++++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|+|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l 93 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHL 93 (174)
T ss_dssp SEEECCSSCCS-SCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred cEEEeCCCCCC-ccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCcc
Confidence 35566666664 56767778888888888888888888889999999999999999987777788899999999999999
Q ss_pred CCCCCCCcccCCCcCeeeeccccccccc
Q 007107 190 SGDLPNSFISLSNISSLYLQNNQVTGSL 217 (618)
Q Consensus 190 ~g~~p~~~~~l~~L~~L~l~~N~l~~~~ 217 (618)
++..+..|..+++|++|+|++|+|....
T Consensus 94 ~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 94 KSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ceeCHHHhccccCCCEEEeCCCCccccc
Confidence 9655556888889998888888887543
No 378
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.61 E-value=1.4e-16 Score=165.17 Aligned_cols=172 Identities=22% Similarity=0.265 Sum_probs=140.0
Q ss_pred EEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCC----CCCC--C-CcceEecccccccccCCcccccC-----CC
Q 007107 87 SIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIP----YQLP--P-NLTSLNLASNNFSGNLPYSIASM-----VS 154 (618)
Q Consensus 87 ~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p----~~~~--~-~L~~L~L~~N~l~~~~p~~~~~l-----~~ 154 (618)
..+|+.|+++|.+|..+...++|++|+|++|.|++..+ ..+. + +|++|+|++|+|++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46889999999999998888899999999999997665 2222 4 89999999999998888888775 99
Q ss_pred ccEEEeecCCCCCchhhhh----cCC-CCCCeEEcccCcCCCCCCCCccc-----CCCcCeeeecccccccccc-----c
Q 007107 155 LSYLNVSRNSLTQSIGDIF----GNL-AGLATLDLSFNNFSGDLPNSFIS-----LSNISSLYLQNNQVTGSLN-----V 219 (618)
Q Consensus 155 L~~L~L~~N~l~~~~p~~~----~~l-~~L~~L~l~~N~l~g~~p~~~~~-----l~~L~~L~l~~N~l~~~~~-----~ 219 (618)
|++|+|++|++++..+..+ ..+ ++|+.|+|++|+|++..+..+.. .++|++|+|++|+|++... .
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 9999999999998877754 444 89999999999999766655443 3699999999999996321 1
Q ss_pred cC-C-CCccEEEcccccccccCchhh--------hcccchhccCCcCCC
Q 007107 220 FS-G-LPLTTLNVANNHFSGWIPREL--------ISIRTFIYDGNSFDN 258 (618)
Q Consensus 220 ~~-~-~~L~~L~l~~N~l~g~ip~~~--------~~l~~l~~~~N~~~~ 258 (618)
+. . .+|+.|+|++|++++..+..+ .+|+.|++++|.+..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~ 210 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGL 210 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCCh
Confidence 11 2 379999999999998777543 378889999998764
No 379
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.60 E-value=7.2e-16 Score=142.45 Aligned_cols=130 Identities=18% Similarity=0.218 Sum_probs=73.3
Q ss_pred ccCCCCCCEEeecCCCCCCCCCCCC--CCCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCC
Q 007107 103 LSDLLSLRKFDLSGNSIHDTIPYQL--PPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLA 180 (618)
Q Consensus 103 l~~l~~L~~L~L~~N~l~~~~p~~~--~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 180 (618)
+.++.+|+.|+|++|+++. +|... .++|++|+|++|+|++. ..+..+++|++|+|++|+|++..+..|..+++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred cCCcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 4455566666666666653 23211 13666666666666643 4566666666666666666654444456666666
Q ss_pred eEEcccCcCCCCCCC--CcccCCCcCeeeeccccccccccc----c-CCCCccEEEccccccc
Q 007107 181 TLDLSFNNFSGDLPN--SFISLSNISSLYLQNNQVTGSLNV----F-SGLPLTTLNVANNHFS 236 (618)
Q Consensus 181 ~L~l~~N~l~g~~p~--~~~~l~~L~~L~l~~N~l~~~~~~----~-~~~~L~~L~l~~N~l~ 236 (618)
+|+|++|+|+ .+|. .+..+++|++|+|++|+++..... + ...+|+.||+++|.+.
T Consensus 92 ~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 6666666664 4444 555666666666666666543331 2 2234666666666554
No 380
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.58 E-value=2.9e-15 Score=138.33 Aligned_cols=129 Identities=19% Similarity=0.224 Sum_probs=109.6
Q ss_pred CCEEEEEcCCCCCcccccccccCCC-CCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccccCCCccEEEee
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLL-SLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (618)
..++.|+|++|+++.. +. +..+. +|++|+|++|.|++.....-.++|++|+|++|+|++..+..+..+++|++|+|+
T Consensus 19 ~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 96 (176)
T 1a9n_A 19 VRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILT 96 (176)
T ss_dssp TSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEECCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECC
T ss_pred CCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcccccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECC
Confidence 4789999999999864 44 55555 999999999999976222223899999999999997655666999999999999
Q ss_pred cCCCCCchhh--hhcCCCCCCeEEcccCcCCCCCCCC----cccCCCcCeeeeccccccc
Q 007107 162 RNSLTQSIGD--IFGNLAGLATLDLSFNNFSGDLPNS----FISLSNISSLYLQNNQVTG 215 (618)
Q Consensus 162 ~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~g~~p~~----~~~l~~L~~L~l~~N~l~~ 215 (618)
+|+|+. +|. .+..+++|+.|+|++|.++ .+|.. +..+++|+.|++++|.+..
T Consensus 97 ~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 97 NNSLVE-LGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp SCCCCC-GGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCcCCc-chhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 999974 555 8999999999999999999 67775 8899999999999999875
No 381
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.58 E-value=4.9e-16 Score=159.29 Aligned_cols=172 Identities=23% Similarity=0.245 Sum_probs=126.6
Q ss_pred CCEEEEEcCCCCCccc-ccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccc-ccccc-CCcccccCCCccE
Q 007107 83 SAVVSIDISGLGLSGT-MGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASN-NFSGN-LPYSIASMVSLSY 157 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~-~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~ 157 (618)
.+++.|+|++|.+.+. ++..+..+++|++|+|++|.+++..|..+. ++|++|+|++| .+++. ++..+.++++|++
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 5788899999988876 778888899999999999988876665544 78888888888 67763 6777888888888
Q ss_pred EEeecC-CCCCc-hhhhhcCCC-CCCeEEcccC--cCC-CCCCCCcccCCCcCeeeecccc-cccc-ccccC-CCCccEE
Q 007107 158 LNVSRN-SLTQS-IGDIFGNLA-GLATLDLSFN--NFS-GDLPNSFISLSNISSLYLQNNQ-VTGS-LNVFS-GLPLTTL 228 (618)
Q Consensus 158 L~L~~N-~l~~~-~p~~~~~l~-~L~~L~l~~N--~l~-g~~p~~~~~l~~L~~L~l~~N~-l~~~-~~~~~-~~~L~~L 228 (618)
|+|++| .+++. ++..+..++ +|+.|+|++| .++ +.+|..+..+++|++|+|++|. +++. ++.+. ..+|+.|
T Consensus 173 L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L 252 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHL 252 (336)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEE
T ss_pred EcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEe
Confidence 888888 88865 577778888 8888888888 454 4566667778888888888888 5543 22322 2458888
Q ss_pred Eccccc-ccccCc---hhhhcccchhccCC
Q 007107 229 NVANNH-FSGWIP---RELISIRTFIYDGN 254 (618)
Q Consensus 229 ~l~~N~-l~g~ip---~~~~~l~~l~~~~N 254 (618)
+|++|. ++.... ..+.+|+.|++.+|
T Consensus 253 ~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 253 SLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp ECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred eCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 888884 332211 22455667777776
No 382
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=2.5e-17 Score=155.48 Aligned_cols=129 Identities=25% Similarity=0.290 Sum_probs=85.1
Q ss_pred CEEEEEcCCCCCcccccc------cccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCc
Q 007107 84 AVVSIDISGLGLSGTMGY------LLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSL 155 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~------~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L 155 (618)
.++.++++.+.+.|.+|. .+..+++|++|+|++|.+++ +| .+. ++|+.|+|++|+++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 344455555555555554 77777788888887777775 45 443 67777777777777 566666667777
Q ss_pred cEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCC-CCcccCCCcCeeeeccccccccc
Q 007107 156 SYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLP-NSFISLSNISSLYLQNNQVTGSL 217 (618)
Q Consensus 156 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~~ 217 (618)
++|+|++|++++ +| .+..+++|+.|+|++|+|++..+ ..+..+++|++|++++|++++.+
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~ 156 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDY 156 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHH
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccc
Confidence 777777777775 34 46667777777777777763211 35666777777777777766653
No 383
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.55 E-value=1.5e-14 Score=132.60 Aligned_cols=102 Identities=23% Similarity=0.240 Sum_probs=90.7
Q ss_pred EEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEeecCC
Q 007107 87 SIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNS 164 (618)
Q Consensus 87 ~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 164 (618)
.|++++|+|+. +|..+ .++|++|+|++|+|++..|..+. ++|+.|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 13 ~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 46777788875 55555 38999999999999988887775 899999999999998877788999999999999999
Q ss_pred CCCchhhhhcCCCCCCeEEcccCcCCC
Q 007107 165 LTQSIGDIFGNLAGLATLDLSFNNFSG 191 (618)
Q Consensus 165 l~~~~p~~~~~l~~L~~L~l~~N~l~g 191 (618)
|++..+..|..+++|+.|+|++|.+..
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 999888899999999999999999984
No 384
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.53 E-value=2.9e-14 Score=155.85 Aligned_cols=118 Identities=22% Similarity=0.273 Sum_probs=103.5
Q ss_pred CCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcc
Q 007107 108 SLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLS 185 (618)
Q Consensus 108 ~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 185 (618)
.|+.|+|++|+|++ +|. +. ++|+.|+|++|+|+ .+|..++++++|+.|+|++|+|++ +| .|+.+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 57789999999996 565 54 89999999999999 889999999999999999999998 56 89999999999999
Q ss_pred cCcCCCCC-CCCcccCCCcCeeeeccccccccccccC-----CCCccEEEc
Q 007107 186 FNNFSGDL-PNSFISLSNISSLYLQNNQVTGSLNVFS-----GLPLTTLNV 230 (618)
Q Consensus 186 ~N~l~g~~-p~~~~~l~~L~~L~l~~N~l~~~~~~~~-----~~~L~~L~l 230 (618)
+|+|++.. |..+..+++|+.|+|++|+|++.++... ..+|+.|+|
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 99999876 9999999999999999999999876432 234777754
No 385
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.53 E-value=9.8e-17 Score=151.37 Aligned_cols=134 Identities=24% Similarity=0.314 Sum_probs=116.1
Q ss_pred ccCCCCCCEEeecCCCCCCCCCC------CCC--CCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhc
Q 007107 103 LSDLLSLRKFDLSGNSIHDTIPY------QLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFG 174 (618)
Q Consensus 103 l~~l~~L~~L~L~~N~l~~~~p~------~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 174 (618)
+.....++.++|+.|.++|.+|. .+. ++|++|+|++|++++ +| .+..+++|++|+|++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 56678899999999999998886 444 899999999999996 67 9999999999999999999 5788888
Q ss_pred CCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeecccccccccc--ccCC-CCccEEEcccccccccCch
Q 007107 175 NLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN--VFSG-LPLTTLNVANNHFSGWIPR 241 (618)
Q Consensus 175 ~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~~-~~L~~L~l~~N~l~g~ip~ 241 (618)
.+++|+.|+|++|+|++ +| .+..+++|++|+|++|+|++... .+.. .+|+.|++++|++++.+|.
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 88999999999999995 66 68899999999999999997433 3433 4699999999999988765
No 386
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.51 E-value=5.2e-14 Score=129.51 Aligned_cols=106 Identities=19% Similarity=0.204 Sum_probs=93.4
Q ss_pred EEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEeecC
Q 007107 86 VSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRN 163 (618)
Q Consensus 86 ~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 163 (618)
+.+++++|+|. .+|..+. ++|++|+|++|+|++..|..+. ++|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56899999995 5666664 8999999999999988887775 89999999999999876777899999999999999
Q ss_pred CCCCchhhhhcCCCCCCeEEcccCcCCCCCCC
Q 007107 164 SLTQSIGDIFGNLAGLATLDLSFNNFSGDLPN 195 (618)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~ 195 (618)
+|++..+..|..+++|+.|+|++|.+. ..+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~-c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD-CECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC-TTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc-cccc
Confidence 999888888999999999999999998 4444
No 387
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.50 E-value=6.8e-16 Score=165.41 Aligned_cols=175 Identities=17% Similarity=0.199 Sum_probs=105.5
Q ss_pred CEEEEEcCCCCCccc----ccccccCCCCCCEEeecCCCCCCCCC----CC---CCCCcceEeccccccccc----CCcc
Q 007107 84 AVVSIDISGLGLSGT----MGYLLSDLLSLRKFDLSGNSIHDTIP----YQ---LPPNLTSLNLASNNFSGN----LPYS 148 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~~p----~~---~~~~L~~L~L~~N~l~~~----~p~~ 148 (618)
+++.|+|++|++++. ++..+..+++|++|+|++|.+++... .. -.++|+.|+|++|+++.. ++..
T Consensus 200 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 279 (461)
T 1z7x_W 200 QLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRV 279 (461)
T ss_dssp CCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHH
T ss_pred CceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHH
Confidence 556666666666542 45555566666666666666653211 11 125677777777776643 4556
Q ss_pred cccCCCccEEEeecCCCCCchhhhhcC-----CCCCCeEEcccCcCCCC----CCCCcccCCCcCeeeecccccccccc-
Q 007107 149 IASMVSLSYLNVSRNSLTQSIGDIFGN-----LAGLATLDLSFNNFSGD----LPNSFISLSNISSLYLQNNQVTGSLN- 218 (618)
Q Consensus 149 ~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~~- 218 (618)
+..+++|++|+|++|++++..+..+.. .++|+.|+|++|.+++. ++..+..+++|++|+|++|++++...
T Consensus 280 l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 359 (461)
T 1z7x_W 280 LRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVR 359 (461)
T ss_dssp HHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHH
T ss_pred HhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHH
Confidence 666777777777777766544433332 25777777777777654 34555566777777777777765321
Q ss_pred c----cC--CCCccEEEcccccccc----cCchhh---hcccchhccCCcCCC
Q 007107 219 V----FS--GLPLTTLNVANNHFSG----WIPREL---ISIRTFIYDGNSFDN 258 (618)
Q Consensus 219 ~----~~--~~~L~~L~l~~N~l~g----~ip~~~---~~l~~l~~~~N~~~~ 258 (618)
. +. ..+|+.|+|++|.+++ .+|..+ .+|+.|++.+|++..
T Consensus 360 ~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 360 ELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred HHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 1 11 2357777777777775 566554 456667777776653
No 388
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.50 E-value=5.4e-14 Score=144.93 Aligned_cols=173 Identities=16% Similarity=0.153 Sum_probs=138.3
Q ss_pred CCCEEEEEcCCCCCcccccc-cccCCCCCCE-EeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccE
Q 007107 82 GSAVVSIDISGLGLSGTMGY-LLSDLLSLRK-FDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSY 157 (618)
Q Consensus 82 ~~~v~~l~l~~~~l~~~~~~-~l~~l~~L~~-L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 157 (618)
-.+++.|+|++|.+.+.+|. .|.+|++|+. +++++|+|+...|..+. ++|++|++++|+|++..+..+....++..
T Consensus 53 l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~ 132 (350)
T 4ay9_X 53 FGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVL 132 (350)
T ss_dssp CTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEE
T ss_pred CCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhh
Confidence 35899999999999887664 7889999875 67788999977776665 89999999999999877777888889999
Q ss_pred EEeec-CCCCCchhhhhcCCC-CCCeEEcccCcCCCCCCCCcccCCCcCeeeecc-ccccccccc-cCC-CCccEEEccc
Q 007107 158 LNVSR-NSLTQSIGDIFGNLA-GLATLDLSFNNFSGDLPNSFISLSNISSLYLQN-NQVTGSLNV-FSG-LPLTTLNVAN 232 (618)
Q Consensus 158 L~L~~-N~l~~~~p~~~~~l~-~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~-N~l~~~~~~-~~~-~~L~~L~l~~ 232 (618)
|++.+ |+++...+..|..+. .|+.|+|++|+|+ .+|.......+|+.|++++ |.++...+. +.. .+|+.|||++
T Consensus 133 l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~ 211 (350)
T 4ay9_X 133 LDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISR 211 (350)
T ss_dssp EEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTT
T ss_pred hhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCC
Confidence 99976 577766667777765 6899999999999 6777666778999999986 556654443 344 4599999999
Q ss_pred ccccccCchhhhcccchhccCCc
Q 007107 233 NHFSGWIPRELISIRTFIYDGNS 255 (618)
Q Consensus 233 N~l~g~ip~~~~~l~~l~~~~N~ 255 (618)
|+|+..-+..+.+|+.|...++.
T Consensus 212 N~l~~lp~~~~~~L~~L~~l~~~ 234 (350)
T 4ay9_X 212 TRIHSLPSYGLENLKKLRARSTY 234 (350)
T ss_dssp SCCCCCCSSSCTTCCEEECTTCT
T ss_pred CCcCccChhhhccchHhhhccCC
Confidence 99995444567888888776653
No 389
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.48 E-value=1.6e-15 Score=162.51 Aligned_cols=174 Identities=21% Similarity=0.226 Sum_probs=140.6
Q ss_pred CEEEEEcCCCCCcc----cccccccCCCCCCEEeecCCCCCCCCCCCC-------CCCcceEeccccccccc----CCcc
Q 007107 84 AVVSIDISGLGLSG----TMGYLLSDLLSLRKFDLSGNSIHDTIPYQL-------PPNLTSLNLASNNFSGN----LPYS 148 (618)
Q Consensus 84 ~v~~l~l~~~~l~~----~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~-------~~~L~~L~L~~N~l~~~----~p~~ 148 (618)
+++.|+|++|+++. .++..+..+++|++|+|++|.+++..+..+ .++|++|+|++|++++. ++..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 69999999999984 678899999999999999999975433322 24799999999999974 4667
Q ss_pred cccCCCccEEEeecCCCCCchhhhhc-----CCCCCCeEEcccCcCCCC----CCCCcccCCCcCeeeeccccccccc--
Q 007107 149 IASMVSLSYLNVSRNSLTQSIGDIFG-----NLAGLATLDLSFNNFSGD----LPNSFISLSNISSLYLQNNQVTGSL-- 217 (618)
Q Consensus 149 ~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~-- 217 (618)
+..+++|++|+|++|.+++..+..+. .+++|+.|+|++|.+++. ++..+..+++|++|+|++|++++..
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~ 245 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMA 245 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHH
Confidence 77889999999999999876555554 367999999999999863 5777888999999999999998632
Q ss_pred ---ccc--CCCCccEEEccccccccc----Cchhh---hcccchhccCCcCC
Q 007107 218 ---NVF--SGLPLTTLNVANNHFSGW----IPREL---ISIRTFIYDGNSFD 257 (618)
Q Consensus 218 ---~~~--~~~~L~~L~l~~N~l~g~----ip~~~---~~l~~l~~~~N~~~ 257 (618)
+.+ ...+|+.|+|++|.+++. ++..+ .+|+.|++++|.+.
T Consensus 246 ~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~ 297 (461)
T 1z7x_W 246 ELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELG 297 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCH
T ss_pred HHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCc
Confidence 222 245699999999999864 56654 56788899998764
No 390
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.41 E-value=3.4e-13 Score=138.75 Aligned_cols=112 Identities=20% Similarity=0.261 Sum_probs=74.0
Q ss_pred CC-CCCCceeEeeCCCEEEEEcCCCCCcccccccccCCCCCCEEeecC-CCCCCCCCCCCCCCcceEecccccccccCCc
Q 007107 70 PC-GESWKGVACEGSAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSG-NSIHDTIPYQLPPNLTSLNLASNNFSGNLPY 147 (618)
Q Consensus 70 ~c-~~~w~gv~c~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~ 147 (618)
.| .|.|.+|.|.+. |+|++ +|. |..+++|+.|+|++ |+|+ +..|.
T Consensus 4 ~c~~C~~~~v~~~~~---------n~l~~-ip~-l~~~~~L~~L~l~~~n~l~----------------------~~~~~ 50 (347)
T 2ifg_A 4 ACCPHGSSGLRCTRD---------GALDS-LHH-LPGAENLTELYIENQQHLQ----------------------HLELR 50 (347)
T ss_dssp SSCCSSSSCEECCSS---------CCCTT-TTT-SCSCSCCSEEECCSCSSCC----------------------EECGG
T ss_pred cCccccCCEEEcCCC---------CCCCc-cCC-CCCCCCeeEEEccCCCCCC----------------------CcChh
Confidence 35 557777766532 15654 555 77777666666664 6555 34445
Q ss_pred ccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccc
Q 007107 148 SIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTG 215 (618)
Q Consensus 148 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 215 (618)
.|.+|++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..++ |+.|+|++|+|..
T Consensus 51 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 51 DLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp GSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred HhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 677777777777777777777777777777777777777777754444444444 7777777777764
No 391
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.37 E-value=9.8e-13 Score=135.31 Aligned_cols=126 Identities=17% Similarity=0.102 Sum_probs=101.5
Q ss_pred eEecccc-cccccCCcccccCCCccEEEeec-CCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeecc
Q 007107 133 SLNLASN-NFSGNLPYSIASMVSLSYLNVSR-NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQN 210 (618)
Q Consensus 133 ~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 210 (618)
.+++++| +|+ .+|. +..+++|++|+|++ |+|++..+..|+++++|+.|+|++|+|++..|..|.+|++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4677777 787 5788 99999999999996 999999999999999999999999999998899999999999999999
Q ss_pred ccccccccc-cCCCCccEEEcccccccccCc-hhhhc---ccchhccCCcCCCCC
Q 007107 211 NQVTGSLNV-FSGLPLTTLNVANNHFSGWIP-RELIS---IRTFIYDGNSFDNGP 260 (618)
Q Consensus 211 N~l~~~~~~-~~~~~L~~L~l~~N~l~g~ip-~~~~~---l~~l~~~~N~~~~~~ 260 (618)
|+|++.++. +...+|+.|+|++|.|...-. ..|.. .....+..+.+.|..
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~ 144 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHG 144 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSS
T ss_pred CccceeCHHHcccCCceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCC
Confidence 999987764 444569999999999984322 22222 123334456666643
No 392
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.33 E-value=3.6e-14 Score=146.98 Aligned_cols=163 Identities=14% Similarity=0.161 Sum_probs=123.0
Q ss_pred CCEEEEEcCCCCCcccccccccCC-----CCCCEEeecCCCCCCCCCCCCC---CCcceEecccccccccCCccc-----
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDL-----LSLRKFDLSGNSIHDTIPYQLP---PNLTSLNLASNNFSGNLPYSI----- 149 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l-----~~L~~L~L~~N~l~~~~p~~~~---~~L~~L~L~~N~l~~~~p~~~----- 149 (618)
..++.|+|++|.|+......+..+ ++|+.|+|++|.|+......+. ++|+.|+|++|+|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 578999999999987555554433 7999999999999754333333 689999999999986544444
Q ss_pred ccCCCccEEEeecCCCCCc----hhhhhcCCCCCCeEEcccCcCCCC----CCCCcccCCCcCeeeeccccccccc----
Q 007107 150 ASMVSLSYLNVSRNSLTQS----IGDIFGNLAGLATLDLSFNNFSGD----LPNSFISLSNISSLYLQNNQVTGSL---- 217 (618)
Q Consensus 150 ~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~---- 217 (618)
...++|++|+|++|.|+.. ++..+..+++|++|+|++|.|++. ++..+...++|++|+|++|.|+..-
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 2468899999999999853 455667889999999999999743 3455677789999999999998632
Q ss_pred c-cc-CCCCccEEEcccccccccCchhhhc
Q 007107 218 N-VF-SGLPLTTLNVANNHFSGWIPRELIS 245 (618)
Q Consensus 218 ~-~~-~~~~L~~L~l~~N~l~g~ip~~~~~ 245 (618)
. .+ ...+|+.|||++|.|+..-...+..
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHHHHHHHHH
T ss_pred HHHHHhCCCCCEEeccCCCCCHHHHHHHHH
Confidence 1 11 2346999999999998654444443
No 393
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.23 E-value=1.8e-11 Score=120.42 Aligned_cols=144 Identities=12% Similarity=0.054 Sum_probs=110.0
Q ss_pred hcCCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-CCcccccceEEeeCCeEEEEE
Q 007107 409 TNSFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLLVY 487 (618)
Q Consensus 409 ~~~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 487 (618)
...|.....++.|+.+.||++... ++.+++|........ ....+.+|++.++.+. +..+.++++++...+..++||
T Consensus 13 l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~--~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 13 IEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKG--TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTT--STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred hccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCC--CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 346777778888999999999764 688999998643211 1235778888888774 677888999999889999999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-----------------------------------
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC----------------------------------- 532 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----------------------------------- 532 (618)
||++|.+|.+.+. +......++.+++++++.||+..
T Consensus 90 e~i~G~~l~~~~~---------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (263)
T 3tm0_A 90 SEADGVLCSEEYE---------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE 160 (263)
T ss_dssp ECCSSEEHHHHCC---------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred EecCCeehhhccC---------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence 9999999877531 11123467889999999999821
Q ss_pred ---------------------CCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 533 ---------------------LPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 533 ---------------------~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
.+.++|+|++|.|||++++..+.|+||+.+..
T Consensus 161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 02589999999999998766667999998754
No 394
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.16 E-value=1.4e-12 Score=135.05 Aligned_cols=155 Identities=18% Similarity=0.189 Sum_probs=113.6
Q ss_pred CCEEEEEcCCCCCccccccccc-CCCCCCEEeecCCCCCCCCCCCC-------CCCcceEecccccccc----cCCcccc
Q 007107 83 SAVVSIDISGLGLSGTMGYLLS-DLLSLRKFDLSGNSIHDTIPYQL-------PPNLTSLNLASNNFSG----NLPYSIA 150 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~-~l~~L~~L~L~~N~l~~~~p~~~-------~~~L~~L~L~~N~l~~----~~p~~~~ 150 (618)
..++.|+|++|+|+......+. .+++|+.|+|++|.|+......+ .++|+.|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 5899999999999765444443 56789999999999975433222 3789999999999985 3455667
Q ss_pred cCCCccEEEeecCCCCCc----hhhhhcCCCCCCeEEcccCcCCCC----CCCCcccCCCcCeeeeccccccccc----c
Q 007107 151 SMVSLSYLNVSRNSLTQS----IGDIFGNLAGLATLDLSFNNFSGD----LPNSFISLSNISSLYLQNNQVTGSL----N 218 (618)
Q Consensus 151 ~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~~----~ 218 (618)
.+++|++|+|++|+|+.. ++..+...++|+.|+|++|.|++. ++..+...++|++|+|++|.|+..- .
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLR 260 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHH
Confidence 899999999999999853 356778889999999999999853 3344556789999999999998632 1
Q ss_pred ccCCCC---ccEEE--cccccccc
Q 007107 219 VFSGLP---LTTLN--VANNHFSG 237 (618)
Q Consensus 219 ~~~~~~---L~~L~--l~~N~l~g 237 (618)
...... |+.+. +..|.++.
T Consensus 261 ~~~~~~~~~L~~l~~ll~~~~~~~ 284 (372)
T 3un9_A 261 DLGGAAEGGARVVVSLTEGTAVSE 284 (372)
T ss_dssp HCC------CEEECCCC----CHH
T ss_pred HHhcCCCccchhhHhhhcCCccCH
Confidence 122222 66776 66776653
No 395
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.15 E-value=6.2e-11 Score=120.83 Aligned_cols=164 Identities=14% Similarity=0.105 Sum_probs=102.2
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccc----cccCCccc-------
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNF----SGNLPYSI------- 149 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l----~~~~p~~~------- 149 (618)
..++.|+|++ +++.+.+.+|.++++|+.|+|++|.++...+..|. .++..+.+..+.. ...-...|
T Consensus 101 ~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~ 179 (329)
T 3sb4_A 101 QTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLE 179 (329)
T ss_dssp TTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCE
T ss_pred CCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccc
Confidence 4666777777 67666666777777777777777776633333333 2333333333111 00000000
Q ss_pred -------------------------------------------ccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEccc
Q 007107 150 -------------------------------------------ASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSF 186 (618)
Q Consensus 150 -------------------------------------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 186 (618)
..+++|+.|+|++|+++.+.+.+|.++++|+.|+|.+
T Consensus 180 ~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~ 259 (329)
T 3sb4_A 180 TTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPH 259 (329)
T ss_dssp EEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCT
T ss_pred eeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCc
Confidence 0267888888888888876677888888888888888
Q ss_pred CcCCCCCCCCcccCCCcC-eeeeccccccccc-cccCC-CCccEEEcccccccccCchhhhcccch
Q 007107 187 NNFSGDLPNSFISLSNIS-SLYLQNNQVTGSL-NVFSG-LPLTTLNVANNHFSGWIPRELISIRTF 249 (618)
Q Consensus 187 N~l~g~~p~~~~~l~~L~-~L~l~~N~l~~~~-~~~~~-~~L~~L~l~~N~l~g~ip~~~~~l~~l 249 (618)
| ++..-+..|.++.+|+ .|++.+ +++... ..|.. .+|+.|++++|+++..-+..|.++..|
T Consensus 260 n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L 323 (329)
T 3sb4_A 260 N-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPS 323 (329)
T ss_dssp T-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCC
T ss_pred c-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcch
Confidence 7 6645566788888888 888877 665543 23444 358888888888875444556554433
No 396
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.15 E-value=4e-11 Score=117.70 Aligned_cols=138 Identities=18% Similarity=0.171 Sum_probs=99.1
Q ss_pred CCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCc--ccccceEEeeCCeEEEEEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN--IVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e 488 (618)
.+....+.+.|..+.||++...+|+.+++|...... ...+..|++.++.+.+.+ +.+++++....+..++|||
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~-----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e 95 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA-----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG 95 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT-----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCccc-----chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence 344433334566699999988778889999876431 234667777777775444 4568888887788999999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC------------------------------------
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC------------------------------------ 532 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------------------------------------ 532 (618)
|+++.++. .. . .+ ...++.++++.|+.||+..
T Consensus 96 ~i~G~~l~--~~-----~--~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
T 1nd4_A 96 EVPGQDLL--SS-----H--LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ 163 (264)
T ss_dssp CCSSEETT--TS-----C--CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGT
T ss_pred ecCCcccC--cC-----c--CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhcc
Confidence 99998873 21 0 11 2356778888888888752
Q ss_pred -------------------CCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 533 -------------------LPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 533 -------------------~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
.+.++|+|++|.||++++++.+.|+|||.+...
T Consensus 164 ~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 164 GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp TCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred CccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 012899999999999988766779999987543
No 397
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.04 E-value=8.7e-12 Score=137.82 Aligned_cols=175 Identities=18% Similarity=0.095 Sum_probs=90.1
Q ss_pred CCEEEEEcCCCCCccccc-ccccCCCCCCEEeecCCCCCCCCCCCC---CCCcceEecc-----------ccccccc-CC
Q 007107 83 SAVVSIDISGLGLSGTMG-YLLSDLLSLRKFDLSGNSIHDTIPYQL---PPNLTSLNLA-----------SNNFSGN-LP 146 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~p~~~---~~~L~~L~L~-----------~N~l~~~-~p 146 (618)
.+++.|+|++|.+++... ..+..+++|+.|+|+ |.++......+ .++|+.|+|+ .|.+++. ++
T Consensus 293 ~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~ 371 (592)
T 3ogk_B 293 AQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLI 371 (592)
T ss_dssp GGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHH
T ss_pred CCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHH
Confidence 478999999999876444 335667777777776 33321111111 1445555555 2444432 11
Q ss_pred cccccCCCccEEEeecCCCCCchhhhhcC-CCCCCeEEcc----cCcCC-------------------------------
Q 007107 147 YSIASMVSLSYLNVSRNSLTQSIGDIFGN-LAGLATLDLS----FNNFS------------------------------- 190 (618)
Q Consensus 147 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~l~----~N~l~------------------------------- 190 (618)
.....+++|++|+|+.|++++..+..++. +++|+.|+|+ .|.++
T Consensus 372 ~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~ 451 (592)
T 3ogk_B 372 ALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLT 451 (592)
T ss_dssp HHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCC
T ss_pred HHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCcc
Confidence 12233455555555555555444444433 4444444443 33444
Q ss_pred CCCCCCcc-cCCCcCeeeeccccccc-cccc-cC-CCCccEEEcccccccccCch----hhhcccchhccCCcCCC
Q 007107 191 GDLPNSFI-SLSNISSLYLQNNQVTG-SLNV-FS-GLPLTTLNVANNHFSGWIPR----ELISIRTFIYDGNSFDN 258 (618)
Q Consensus 191 g~~p~~~~-~l~~L~~L~l~~N~l~~-~~~~-~~-~~~L~~L~l~~N~l~g~ip~----~~~~l~~l~~~~N~~~~ 258 (618)
+..+..+. .+++|++|+|++|++++ .++. .. ..+|+.|+|++|.|++.... .+.+|+.|++++|.+..
T Consensus 452 ~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 452 DLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp HHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCT
T ss_pred HHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCH
Confidence 32222222 25666677777666665 2222 12 24577777777777654222 23566677777776543
No 398
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.03 E-value=7.4e-10 Score=114.24 Aligned_cols=143 Identities=16% Similarity=0.253 Sum_probs=104.9
Q ss_pred cceeccCccceEEEEEEcCCcEEEEEEcC--cccccHHHHHHHHHHHHHhhcCC--CCcccccceEEeeC---CeEEEEE
Q 007107 415 EFLIGEGSLGRVYRAEFANGKIMAVKKID--NAALSLQEEDNFLEAVSNMSRLR--HPNIVTLAGYCAEH---GQRLLVY 487 (618)
Q Consensus 415 ~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~--~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~ 487 (618)
.+.++.|.++.||+....+ ..+++|+.. .... ......+.+|+++++.+. +..+.+++.++.+. +..++||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~-~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKL-LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCC-CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 4578999999999998764 678888775 3221 123456778888888876 44578888888776 4589999
Q ss_pred EecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-----------------------------------
Q 007107 488 EYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC----------------------------------- 532 (618)
Q Consensus 488 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----------------------------------- 532 (618)
||+++..+.+.. ...++..++..++.++++.|+.||+..
T Consensus 121 e~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 121 EFVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp ECCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred EecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 999987775421 234678888899999999999999731
Q ss_pred --------------------CCCceecCCCCCCeeecCCCC--cEEeeccccccC
Q 007107 533 --------------------LPSVVHRNFKSANILLDDELN--PHLSDCGLAALT 565 (618)
Q Consensus 533 --------------------~~~iiH~Dlkp~NiLl~~~~~--~kl~Dfgl~~~~ 565 (618)
.+.++|+|+++.|||+++++. +.|+||+.+...
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 136899999999999997753 689999988643
No 399
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.01 E-value=7.2e-10 Score=112.86 Aligned_cols=146 Identities=18% Similarity=0.200 Sum_probs=116.9
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCC----CCCCCCC--------------------------------
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSI----HDTIPYQ-------------------------------- 126 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l----~~~~p~~-------------------------------- 126 (618)
..++.|+|++|.+....+.+|..+.++..+.+..+.. .......
T Consensus 124 ~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~ 203 (329)
T 3sb4_A 124 DNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRD 203 (329)
T ss_dssp TTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGG
T ss_pred cccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccc
Confidence 4799999999999888888898888888777665321 1000000
Q ss_pred --------------------CCCCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCC-eEEcc
Q 007107 127 --------------------LPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLA-TLDLS 185 (618)
Q Consensus 127 --------------------~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~l~ 185 (618)
..++|+.|+|++|+++...+..|.+|++|+.|+|.+| ++.+.+.+|.++++|+ .|+|.
T Consensus 204 ~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~ 282 (329)
T 3sb4_A 204 INFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELP 282 (329)
T ss_dssp CSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEEC
T ss_pred cceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEc
Confidence 1478999999999999777778999999999999998 8877788999999999 99999
Q ss_pred cCcCCCCCCCCcccCCCcCeeeecccccccccc-ccCCC-CccEEEc
Q 007107 186 FNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSGL-PLTTLNV 230 (618)
Q Consensus 186 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~-~L~~L~l 230 (618)
+ +++..-+..|.+|++|+.|++++|+++...+ .|... +|+.|+.
T Consensus 283 ~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 283 A-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp T-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred c-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 9 7875667889999999999999999998654 34444 5887753
No 400
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.98 E-value=1.7e-10 Score=127.51 Aligned_cols=102 Identities=12% Similarity=0.120 Sum_probs=68.2
Q ss_pred CEEEEEcCCCC-Ccc-cccccccCCCCCCEEeecCCCCCCCCCCC------CCCCcceEeccccccc----ccCCccccc
Q 007107 84 AVVSIDISGLG-LSG-TMGYLLSDLLSLRKFDLSGNSIHDTIPYQ------LPPNLTSLNLASNNFS----GNLPYSIAS 151 (618)
Q Consensus 84 ~v~~l~l~~~~-l~~-~~~~~l~~l~~L~~L~L~~N~l~~~~p~~------~~~~L~~L~L~~N~l~----~~~p~~~~~ 151 (618)
+++.|+|+++. ++. .++.....+++|++|+|++|.+++.-... -.++|++|+|++|.++ +.++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 38888887765 211 12233347788888888888876542211 1267888888888886 344555667
Q ss_pred CCCccEEEeecCCCCCchhhhhcCCCCCCeEEccc
Q 007107 152 MVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSF 186 (618)
Q Consensus 152 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 186 (618)
+++|+.|+|++|.+.+ +|..+.++++|+.|+++.
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 7888888888888775 556677777777777764
No 401
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.96 E-value=2.9e-10 Score=114.43 Aligned_cols=186 Identities=19% Similarity=0.237 Sum_probs=119.4
Q ss_pred cceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-CCc--ccccceEEeeCC---eEEEEEE
Q 007107 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPN--IVTLAGYCAEHG---QRLLVYE 488 (618)
Q Consensus 415 ~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e 488 (618)
.+.++.|....||+.. +.+++|..... .....+.+|++.++.+. +.. +.+++......+ ..|+|||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~ 96 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT 96 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence 3468999999999863 56888886532 34567888999887763 333 333444333322 3488999
Q ss_pred ecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcC------------------------------------
Q 007107 489 YVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVC------------------------------------ 532 (618)
Q Consensus 489 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------------------------------------ 532 (618)
+++|.++.+... ..++..++..++.++++.++.||+..
T Consensus 97 ~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 97 KIKGVPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp CCCCEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred ccCCeECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 999988765331 23567777788888888888888621
Q ss_pred -------------------CCCceecCCCCCCeeecC--CCCcEEeeccccccCCCCCccccc-------------cccc
Q 007107 533 -------------------LPSVVHRNFKSANILLDD--ELNPHLSDCGLAALTPNTERQVST-------------QMVG 578 (618)
Q Consensus 533 -------------------~~~iiH~Dlkp~NiLl~~--~~~~kl~Dfgl~~~~~~~~~~~~~-------------~~~g 578 (618)
.+.++|+|++|.||++++ +..+.|+||+.+...+...+-... ....
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~ 250 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILN 250 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHH
Confidence 135799999999999998 556789999988654321110000 0000
Q ss_pred cccccC-ccccccCCccccchhhhHHHHHHHHHhCCCCC
Q 007107 579 AFGYSA-PEFALSGIYTVKSDVYSFGVVMLELLTGRKPL 616 (618)
Q Consensus 579 t~~y~a-PE~~~~~~~~~~~DvwSlG~il~elltg~~Pf 616 (618)
..+... |+..... ..-.+.|++|.++|.+.+|..||
T Consensus 251 ~Y~~~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 251 HYKHKDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHTCSCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HcCCCCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHH
Confidence 011111 2221111 12258999999999999998775
No 402
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.89 E-value=1.1e-11 Score=120.78 Aligned_cols=116 Identities=18% Similarity=0.180 Sum_probs=58.3
Q ss_pred CCceeEeeCC--CEEEEEcCC---CCCcccc-cccccCCCCCCEEeecCCCCCCCCCCC-CC--CCcce--Eeccccccc
Q 007107 74 SWKGVACEGS--AVVSIDISG---LGLSGTM-GYLLSDLLSLRKFDLSGNSIHDTIPYQ-LP--PNLTS--LNLASNNFS 142 (618)
Q Consensus 74 ~w~gv~c~~~--~v~~l~l~~---~~l~~~~-~~~l~~l~~L~~L~L~~N~l~~~~p~~-~~--~~L~~--L~L~~N~l~ 142 (618)
.|.|+.|+.. +|..+-..+ ..+.+.+ |+.+..|+. .|...+|..++.++.+ +. +.|+. ++++.|+..
T Consensus 79 ~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~ 156 (267)
T 3rw6_A 79 AVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRS 156 (267)
T ss_dssp HTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHH
T ss_pred hcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCHHH
Confidence 6999999754 565544433 2223333 223333332 3334444444333322 11 34444 566666433
Q ss_pred ---ccCCcccccCCCccEEEeecCCCCC--chhhhhcCCCCCCeEEcccCcCCC
Q 007107 143 ---GNLPYSIASMVSLSYLNVSRNSLTQ--SIGDIFGNLAGLATLDLSFNNFSG 191 (618)
Q Consensus 143 ---~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~g 191 (618)
+.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++
T Consensus 157 ~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~ 210 (267)
T 3rw6_A 157 CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKS 210 (267)
T ss_dssp HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCS
T ss_pred HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCC
Confidence 2222222456666666666666666 334555566666666666666663
No 403
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.86 E-value=2.4e-10 Score=126.21 Aligned_cols=171 Identities=15% Similarity=0.079 Sum_probs=116.9
Q ss_pred CCEEEEEcCCCCCcccccc-cccCCCCCCEEeecCCCCCCCCCCCC---CCCcceEec---------ccccccccCCccc
Q 007107 83 SAVVSIDISGLGLSGTMGY-LLSDLLSLRKFDLSGNSIHDTIPYQL---PPNLTSLNL---------ASNNFSGNLPYSI 149 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~-~l~~l~~L~~L~L~~N~l~~~~p~~~---~~~L~~L~L---------~~N~l~~~~p~~~ 149 (618)
.+++.|+|++|.+++.... .+..+++|+.|+|++| ++......+ .++|+.|+| +.|.+++.....+
T Consensus 289 ~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l 367 (594)
T 2p1m_B 289 SRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSV 367 (594)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHH
T ss_pred CCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHH
Confidence 5789999999998764433 4668899999999988 442211111 378999988 4466665444444
Q ss_pred c-cCCCccEEEeecCCCCCchhhhhc-CCCCCCeEEcc--c----CcCCCCCCC------CcccCCCcCeeeeccccccc
Q 007107 150 A-SMVSLSYLNVSRNSLTQSIGDIFG-NLAGLATLDLS--F----NNFSGDLPN------SFISLSNISSLYLQNNQVTG 215 (618)
Q Consensus 150 ~-~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~l~--~----N~l~g~~p~------~~~~l~~L~~L~l~~N~l~~ 215 (618)
. .+++|++|+++.|++++.....+. .+++|+.|+|+ + |++++ .|. .+..+++|+.|+|++ .+++
T Consensus 368 ~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~-~~~~~~~~~l~~~~~~L~~L~L~~-~l~~ 445 (594)
T 2p1m_B 368 SMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL-EPLDIGFGAIVEHCKDLRRLSLSG-LLTD 445 (594)
T ss_dssp HHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC-CCTHHHHHHHHHHCTTCCEEECCS-SCCH
T ss_pred HHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC-CchhhHHHHHHhhCCCccEEeecC-cccH
Confidence 3 488899998888998877666665 58889999998 3 55652 221 255678888888876 5555
Q ss_pred cc-cccC--CCCccEEEcccccccccCchh----hhcccchhccCCcC
Q 007107 216 SL-NVFS--GLPLTTLNVANNHFSGWIPRE----LISIRTFIYDGNSF 256 (618)
Q Consensus 216 ~~-~~~~--~~~L~~L~l~~N~l~g~ip~~----~~~l~~l~~~~N~~ 256 (618)
.. ..+. ..+|+.|+|++|.+++..+.. +.+|+.|++.+|++
T Consensus 446 ~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 446 KVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred HHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 32 2221 345888888888887655533 46778888888876
No 404
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.84 E-value=7.7e-11 Score=130.22 Aligned_cols=172 Identities=14% Similarity=0.120 Sum_probs=123.6
Q ss_pred CCEEEEEcCCCCCccc-ccccccCCCCCCEEeecC---------CCCCCCCCCCC---CCCcceEecccccccccCCccc
Q 007107 83 SAVVSIDISGLGLSGT-MGYLLSDLLSLRKFDLSG---------NSIHDTIPYQL---PPNLTSLNLASNNFSGNLPYSI 149 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~-~~~~l~~l~~L~~L~L~~---------N~l~~~~p~~~---~~~L~~L~L~~N~l~~~~p~~~ 149 (618)
.+++.|+++++ +... ++.....+++|+.|+|++ |.+++.....+ .++|+.|+++.|++++..+..+
T Consensus 314 ~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l 392 (594)
T 2p1m_B 314 PKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITI 392 (594)
T ss_dssp TTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHH
T ss_pred CCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHH
Confidence 57899999988 5432 233334689999999943 45553222222 3789999999999997766666
Q ss_pred c-cCCCccEEEee--c----CCCCCc-----hhhhhcCCCCCCeEEcccCcCCCCCCCCccc-CCCcCeeeecccccccc
Q 007107 150 A-SMVSLSYLNVS--R----NSLTQS-----IGDIFGNLAGLATLDLSFNNFSGDLPNSFIS-LSNISSLYLQNNQVTGS 216 (618)
Q Consensus 150 ~-~l~~L~~L~L~--~----N~l~~~-----~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~-l~~L~~L~l~~N~l~~~ 216 (618)
. .+++|+.|+|+ + |++++. ++..+..+++|+.|+|++ .+++..+..+.. +++|++|+|++|.+++.
T Consensus 393 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~ 471 (594)
T 2p1m_B 393 ARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDL 471 (594)
T ss_dssp HHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHH
T ss_pred HhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHH
Confidence 5 68999999999 4 667632 334467789999999977 676555555555 88999999999999763
Q ss_pred cc-cc--CCCCccEEEcccccccccCch----hhhcccchhccCCcC
Q 007107 217 LN-VF--SGLPLTTLNVANNHFSGWIPR----ELISIRTFIYDGNSF 256 (618)
Q Consensus 217 ~~-~~--~~~~L~~L~l~~N~l~g~ip~----~~~~l~~l~~~~N~~ 256 (618)
.. .+ ...+|+.|+|++|.+++..+. .+.+|+.|++.+|+.
T Consensus 472 ~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 472 GMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred HHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 32 11 245699999999999754433 456788888888876
No 405
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.71 E-value=4.9e-09 Score=107.53 Aligned_cols=161 Identities=16% Similarity=0.190 Sum_probs=93.5
Q ss_pred CCEEEEEcCCCCC---------cccccccccCCCCCCEEeecCCCCCCCCCCCCCCCcceEecccccccccCCcccc--c
Q 007107 83 SAVVSIDISGLGL---------SGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLPPNLTSLNLASNNFSGNLPYSIA--S 151 (618)
Q Consensus 83 ~~v~~l~l~~~~l---------~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~--~ 151 (618)
.+++.|.+.++.. .+.+...+..+++|+.|+|++|.-. .++..-.++|+.|+|..|.++......+. .
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~~~~~~L~~L~L~~~~l~~~~l~~l~~~~ 217 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGKKPRPNLKSLEIISGGLPDSVVEDILGSD 217 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCSCBCTTCSEEEEECSBCCHHHHHHHHHSB
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eeccccCCCCcEEEEecCCCChHHHHHHHHcc
Confidence 4677777765433 1234455667788888888777311 12221137788888887777654444444 6
Q ss_pred CCCccEEEeec--CCCCCc-----hhhhh--cCCCCCCeEEcccCcCCCCCCCCcc---cCCCcCeeeeccccccccc--
Q 007107 152 MVSLSYLNVSR--NSLTQS-----IGDIF--GNLAGLATLDLSFNNFSGDLPNSFI---SLSNISSLYLQNNQVTGSL-- 217 (618)
Q Consensus 152 l~~L~~L~L~~--N~l~~~-----~p~~~--~~l~~L~~L~l~~N~l~g~~p~~~~---~l~~L~~L~l~~N~l~~~~-- 217 (618)
+++|+.|+|+. |...+. +...+ ..+++|+.|+|++|.+.+..+..+. .+++|++|+|+.|.|++.-
T Consensus 218 lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~ 297 (362)
T 2ra8_A 218 LPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGAR 297 (362)
T ss_dssp CTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHH
T ss_pred CCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHH
Confidence 78888888753 222111 11122 2467888888888877643332222 4677888888888877621
Q ss_pred cccC----CCCccEEEcccccccccCchhhh
Q 007107 218 NVFS----GLPLTTLNVANNHFSGWIPRELI 244 (618)
Q Consensus 218 ~~~~----~~~L~~L~l~~N~l~g~ip~~~~ 244 (618)
.... ..+|+.|+|++|.|+...-..+.
T Consensus 298 ~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~ 328 (362)
T 2ra8_A 298 LLLDHVDKIKHLKFINMKYNYLSDEMKKELQ 328 (362)
T ss_dssp HHHTTHHHHTTCSEEECCSBBCCHHHHHHHH
T ss_pred HHHhhcccCCcceEEECCCCcCCHHHHHHHH
Confidence 1111 13588888888877644333333
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.63 E-value=2.2e-08 Score=102.59 Aligned_cols=172 Identities=13% Similarity=0.134 Sum_probs=116.2
Q ss_pred CCEEEEEcCCCCCcc-c-------ccccccCCCCCCEEeecCCCCCC---------CCCCC--CCCCcceEecccccccc
Q 007107 83 SAVVSIDISGLGLSG-T-------MGYLLSDLLSLRKFDLSGNSIHD---------TIPYQ--LPPNLTSLNLASNNFSG 143 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~-~-------~~~~l~~l~~L~~L~L~~N~l~~---------~~p~~--~~~~L~~L~L~~N~l~~ 143 (618)
.+|+.|.+...+..| . +..++..+++|+.|.+..+.... .+... -.++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 468888888776653 2 23446678999999998764421 11111 1279999999988311
Q ss_pred cCCcccccCCCccEEEeecCCCCCchhhhhc--CCCCCCeEEccc--CcCCCC-----CCCCc--ccCCCcCeeeecccc
Q 007107 144 NLPYSIASMVSLSYLNVSRNSLTQSIGDIFG--NLAGLATLDLSF--NNFSGD-----LPNSF--ISLSNISSLYLQNNQ 212 (618)
Q Consensus 144 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~l~~--N~l~g~-----~p~~~--~~l~~L~~L~l~~N~ 212 (618)
.++. + .+++|+.|+|..|.++......++ .+++|+.|+|+. |...|. +...+ ..+++|++|+|++|.
T Consensus 186 ~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~ 263 (362)
T 2ra8_A 186 SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAE 263 (362)
T ss_dssp BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCT
T ss_pred eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCC
Confidence 2333 3 389999999999998865555554 789999999964 332221 11122 247899999999999
Q ss_pred cccccc-----ccCCCCccEEEccccccccc----Cch---hhhcccchhccCCcCC
Q 007107 213 VTGSLN-----VFSGLPLTTLNVANNHFSGW----IPR---ELISIRTFIYDGNSFD 257 (618)
Q Consensus 213 l~~~~~-----~~~~~~L~~L~l~~N~l~g~----ip~---~~~~l~~l~~~~N~~~ 257 (618)
+++... .....+|+.|+|+.|.|++. ++. .+.+|+.|++.+|.+.
T Consensus 264 i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 264 EQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp THHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 985321 11234699999999999873 333 3567888888888655
No 407
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.63 E-value=1.5e-09 Score=100.54 Aligned_cols=93 Identities=15% Similarity=0.159 Sum_probs=44.1
Q ss_pred cccccccCCCCCCEEeecCC-CCCCCCC----CCC--CCCcceEeccccccccc----CCcccccCCCccEEEeecCCCC
Q 007107 98 TMGYLLSDLLSLRKFDLSGN-SIHDTIP----YQL--PPNLTSLNLASNNFSGN----LPYSIASMVSLSYLNVSRNSLT 166 (618)
Q Consensus 98 ~~~~~l~~l~~L~~L~L~~N-~l~~~~p----~~~--~~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 166 (618)
.+...+...+.|++|+|++| .|+..-- ..+ .++|++|+|++|+|... +...+...+.|++|+|++|.|+
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 44455666777777777777 6652111 111 14455555555555421 2223333445555555555554
Q ss_pred Cc----hhhhhcCCCCCCeEEc--ccCcCC
Q 007107 167 QS----IGDIFGNLAGLATLDL--SFNNFS 190 (618)
Q Consensus 167 ~~----~p~~~~~l~~L~~L~l--~~N~l~ 190 (618)
.. +...+...++|+.|+| ++|.|.
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 32 2333344444555555 444444
No 408
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.60 E-value=2e-07 Score=97.14 Aligned_cols=167 Identities=11% Similarity=0.110 Sum_probs=111.2
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEe
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNV 160 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 160 (618)
..++.++|++|+++......|. .++|+.+.|.+| ++..-...|. ++|+.++|..| ++..-...|.+ .+|+.+.|
T Consensus 180 ~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l 255 (401)
T 4fdw_A 180 YNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL 255 (401)
T ss_dssp TTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE
T ss_pred ccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe
Confidence 4688899998888876666666 588888888854 6533333333 68888888864 55455566666 67888888
Q ss_pred ecCCCCCchhhhhcCCCCCCeEEcccCcCC-----CCCCCCcccCCCcCeeeecccccccccc-ccCC-CCccEEEcccc
Q 007107 161 SRNSLTQSIGDIFGNLAGLATLDLSFNNFS-----GDLPNSFISLSNISSLYLQNNQVTGSLN-VFSG-LPLTTLNVANN 233 (618)
Q Consensus 161 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-----g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~-~~L~~L~l~~N 233 (618)
.|.++.+...+|.++++|+.+++.+|.+. ..-+..|.++++|+.++|. |+++.... .+.+ .+|+.|+|.+|
T Consensus 256 -p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 256 -PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp -ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT
T ss_pred -CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc
Confidence 55666666778888888888888887765 2445667788888888887 44554332 3444 45888888555
Q ss_pred cccccCchhhh--cccchhccCCcC
Q 007107 234 HFSGWIPRELI--SIRTFIYDGNSF 256 (618)
Q Consensus 234 ~l~g~ip~~~~--~l~~l~~~~N~~ 256 (618)
++..-+..|. +|+.+.+.+|..
T Consensus 334 -l~~I~~~aF~~~~L~~l~l~~n~~ 357 (401)
T 4fdw_A 334 -VTQINFSAFNNTGIKEVKVEGTTP 357 (401)
T ss_dssp -CCEECTTSSSSSCCCEEEECCSSC
T ss_pred -ccEEcHHhCCCCCCCEEEEcCCCC
Confidence 5522233332 566667776643
No 409
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.60 E-value=1.9e-07 Score=94.40 Aligned_cols=138 Identities=14% Similarity=0.182 Sum_probs=99.3
Q ss_pred CCcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCC---C-cccccceEEeeCCeEEEE
Q 007107 411 SFSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRH---P-NIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 411 ~~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h---~-niv~l~~~~~~~~~~~lv 486 (618)
.+...+.++.|....||+. |+.+++|+.... .....+.+|.+.++.+.+ + .+.+++++ +..++|
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~----~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lv 105 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD----SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNI 105 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH----HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH----HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEE
Confidence 4455667999999999998 677888876432 224457888888777765 1 23444443 567899
Q ss_pred EEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---------------------------------
Q 007107 487 YEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL--------------------------------- 533 (618)
Q Consensus 487 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~--------------------------------- 533 (618)
|||++|.++.+... ..++..+...++.++++.++.||+...
T Consensus 106 me~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (320)
T 3r70_A 106 MKYIKGERITYEQY------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQ 179 (320)
T ss_dssp EECCCCBCCCHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTT
T ss_pred EeecCCcccccccc------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcc
Confidence 99999988864321 235666677778888888888885422
Q ss_pred ---------------------------CCceecCCCCCCeeecCCCCcEEeeccccccCC
Q 007107 534 ---------------------------PSVVHRNFKSANILLDDELNPHLSDCGLAALTP 566 (618)
Q Consensus 534 ---------------------------~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~ 566 (618)
+.++|+|++|.|||++++..+.|+||+.+...+
T Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 180 LLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred cccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 234999999999999987667999999986543
No 410
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.59 E-value=2.2e-07 Score=96.88 Aligned_cols=163 Identities=13% Similarity=0.141 Sum_probs=110.3
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC-CCcceEecccccccccCCcccccCCCccEEEeec
Q 007107 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP-PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSR 162 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 162 (618)
.++.++|.+ .+...-+.+|.++++|+.++|++|+++..-...|. .+|+.+.|..| ++..-...|.++++|+.++|..
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~ 235 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPE 235 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCT
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecCC
Confidence 467777775 66666667888888888888888888743333333 78888888744 7766667788888888888886
Q ss_pred CCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccc----cc--cccCC-CCccEEEcccccc
Q 007107 163 NSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTG----SL--NVFSG-LPLTTLNVANNHF 235 (618)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~----~~--~~~~~-~~L~~L~l~~N~l 235 (618)
| ++.+-..+|.+ .+|+.++| .|.++..-...|.++++|+.+++.+|.+.. .+ ..+.. .+|+.++|.+ .+
T Consensus 236 ~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i 311 (401)
T 4fdw_A 236 N-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SI 311 (401)
T ss_dssp T-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TC
T ss_pred C-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ce
Confidence 5 56555667777 78888888 455664556778888888888888887751 12 22333 3588888884 46
Q ss_pred cccCchhhh---cccchhcc
Q 007107 236 SGWIPRELI---SIRTFIYD 252 (618)
Q Consensus 236 ~g~ip~~~~---~l~~l~~~ 252 (618)
+..-...|. +|+.+.+.
T Consensus 312 ~~I~~~aF~~c~~L~~l~lp 331 (401)
T 4fdw_A 312 RILGQGLLGGNRKVTQLTIP 331 (401)
T ss_dssp CEECTTTTTTCCSCCEEEEC
T ss_pred EEEhhhhhcCCCCccEEEEC
Confidence 532233443 34455453
No 411
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.53 E-value=1.5e-08 Score=93.73 Aligned_cols=109 Identities=21% Similarity=0.345 Sum_probs=85.8
Q ss_pred CCCEEEEEcCCC-CCcc----cccccccCCCCCCEEeecCCCCCCCCCCC----CC--CCcceEeccccccccc----CC
Q 007107 82 GSAVVSIDISGL-GLSG----TMGYLLSDLLSLRKFDLSGNSIHDTIPYQ----LP--PNLTSLNLASNNFSGN----LP 146 (618)
Q Consensus 82 ~~~v~~l~l~~~-~l~~----~~~~~l~~l~~L~~L~L~~N~l~~~~p~~----~~--~~L~~L~L~~N~l~~~----~p 146 (618)
...++.|+|++| +|.. .+...+...++|++|+|++|.|+..-... +. ++|++|+|++|+|+.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 467999999999 8865 34566777899999999999997432211 21 6899999999999953 46
Q ss_pred cccccCCCccEEEe--ecCCCCCc----hhhhhcCCCCCCeEEcccCcCC
Q 007107 147 YSIASMVSLSYLNV--SRNSLTQS----IGDIFGNLAGLATLDLSFNNFS 190 (618)
Q Consensus 147 ~~~~~l~~L~~L~L--~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 190 (618)
..+...++|++|+| ++|.|+.. +...+...++|+.|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 67788899999999 88999854 3455566688999999988875
No 412
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.50 E-value=6.5e-08 Score=94.15 Aligned_cols=102 Identities=22% Similarity=0.217 Sum_probs=72.9
Q ss_pred ccCCCCCCE--EeecCCCCCCCCCC------CCCCCcceEecccccccc--cCCcccccCCCccEEEeecCCCCCchhhh
Q 007107 103 LSDLLSLRK--FDLSGNSIHDTIPY------QLPPNLTSLNLASNNFSG--NLPYSIASMVSLSYLNVSRNSLTQSIGDI 172 (618)
Q Consensus 103 l~~l~~L~~--L~L~~N~l~~~~p~------~~~~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 172 (618)
|...+.|.. ++++.|+.. .++. +..++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..
T Consensus 137 l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~ 213 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RE 213 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GG
T ss_pred cCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hh
Confidence 444455554 667777433 2221 123688999999999987 5667788999999999999999976 23
Q ss_pred hcCCC--CCCeEEcccCcCCCCCCC-------CcccCCCcCeee
Q 007107 173 FGNLA--GLATLDLSFNNFSGDLPN-------SFISLSNISSLY 207 (618)
Q Consensus 173 ~~~l~--~L~~L~l~~N~l~g~~p~-------~~~~l~~L~~L~ 207 (618)
+..+. +|+.|+|++|.+++.+|. .+..+++|+.||
T Consensus 214 l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 214 LDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 33344 899999999999987763 256778888776
No 413
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.36 E-value=2.6e-06 Score=85.35 Aligned_cols=138 Identities=19% Similarity=0.147 Sum_probs=93.8
Q ss_pred cceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCC---cccccceEEe-eCCeEEEEEEec
Q 007107 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHP---NIVTLAGYCA-EHGQRLLVYEYV 490 (618)
Q Consensus 415 ~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~ 490 (618)
.+.++.|....||+. |+.+++|+... ......+..|.+.++.+.+. .+.+++.+.. ..+..++||||+
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i 95 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKV 95 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEecc
Confidence 346788999999988 56788887532 23456788999999888653 2455666664 345678999999
Q ss_pred CCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhc---------------------------------------
Q 007107 491 GNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEV--------------------------------------- 531 (618)
Q Consensus 491 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~--------------------------------------- 531 (618)
+|..+.+... ..++..+...++.++++.|+.||+.
T Consensus 96 ~G~~l~~~~~------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 96 QGQILGEDGM------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp CSEECHHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred CCeECchhhh------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 9988765321 1234444555555555555555542
Q ss_pred ------------------CCCCceecCCCCCCeeecC---CCCc-EEeeccccccCC
Q 007107 532 ------------------CLPSVVHRNFKSANILLDD---ELNP-HLSDCGLAALTP 566 (618)
Q Consensus 532 ------------------~~~~iiH~Dlkp~NiLl~~---~~~~-kl~Dfgl~~~~~ 566 (618)
..+.++|+|+++.||++++ ++.+ .|+||+.+...+
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd 226 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISD 226 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEEC
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCC
Confidence 1125699999999999997 4554 799999886543
No 414
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.30 E-value=3.3e-06 Score=82.93 Aligned_cols=136 Identities=15% Similarity=0.175 Sum_probs=94.6
Q ss_pred eeccCccc-eEEEEEEc-CCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-CCcccccceEEeeCCeEEEEEEecCCC
Q 007107 417 LIGEGSLG-RVYRAEFA-NGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLLVYEYVGNG 493 (618)
Q Consensus 417 ~Lg~G~~g-~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g 493 (618)
.+..|..+ .||+.... ++..+++|+-... ....+.+|...++.+. +--+.++++++.+.+..++|||++++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~ 105 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS-----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK 105 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH-----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC-----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence 35556665 68988765 4667888876432 3456778888877663 333677888999999999999999998
Q ss_pred ChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCC----------------------------------------
Q 007107 494 NLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL---------------------------------------- 533 (618)
Q Consensus 494 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~---------------------------------------- 533 (618)
++.+..... ......+..++++.|+.||+...
T Consensus 106 ~~~~~~~~~--------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (272)
T 4gkh_A 106 TAFQVLEEY--------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVE 177 (272)
T ss_dssp EHHHHHHHC--------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHH
T ss_pred cccccccCC--------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHH
Confidence 877654311 11223455566666666664310
Q ss_pred ---------------CCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 534 ---------------PSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 534 ---------------~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
+.++|+|+.+.|||+++++.+-|+||+.+...
T Consensus 178 ~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~g 224 (272)
T 4gkh_A 178 QVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIA 224 (272)
T ss_dssp HHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccC
Confidence 13789999999999998877779999988644
No 415
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.25 E-value=3.5e-06 Score=86.49 Aligned_cols=75 Identities=12% Similarity=0.130 Sum_probs=54.2
Q ss_pred ccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCc--ccccceEEeeC-CeEEEEEEec
Q 007107 414 QEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN--IVTLAGYCAEH-GQRLLVYEYV 490 (618)
Q Consensus 414 ~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~~ 490 (618)
..+.++.|....+|+... +|+.+++|..... ..+..|...++.+.... +.+++.++... +..++||||+
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 345688999999999876 5788999987532 14667777777765433 45667666654 6789999999
Q ss_pred CCCChh
Q 007107 491 GNGNLH 496 (618)
Q Consensus 491 ~~gsL~ 496 (618)
++..+.
T Consensus 117 ~G~~l~ 122 (362)
T 3ovc_A 117 QGVTLQ 122 (362)
T ss_dssp CSEETT
T ss_pred CCCCcc
Confidence 976553
No 416
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.24 E-value=2.8e-06 Score=84.25 Aligned_cols=76 Identities=22% Similarity=0.288 Sum_probs=58.3
Q ss_pred ccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCC---cccccceEEeeCCeEEEEEEec
Q 007107 414 QEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHP---NIVTLAGYCAEHGQRLLVYEYV 490 (618)
Q Consensus 414 ~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~ 490 (618)
..+.|+.|.++.||++...+|+.+++|+...... .....+..|++.++.+.+. .+.+++++. ..++||||+
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~--~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l 92 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAP--ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC--CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCc--chhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEec
Confidence 4567999999999999988999999999653221 1235678999999988765 466777653 468999999
Q ss_pred CCCCh
Q 007107 491 GNGNL 495 (618)
Q Consensus 491 ~~gsL 495 (618)
+++.+
T Consensus 93 ~g~~~ 97 (288)
T 3d1u_A 93 DERPP 97 (288)
T ss_dssp CCCCC
T ss_pred ccCCC
Confidence 98864
No 417
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.04 E-value=3.7e-05 Score=78.70 Aligned_cols=83 Identities=8% Similarity=-0.013 Sum_probs=52.4
Q ss_pred ccee-ccCccceEEEEEEc-------CCcEEEEEEcCcccc-cHHHHHHHHHHHHHhhcCC-C--CcccccceEEeeC--
Q 007107 415 EFLI-GEGSLGRVYRAEFA-------NGKIMAVKKIDNAAL-SLQEEDNFLEAVSNMSRLR-H--PNIVTLAGYCAEH-- 480 (618)
Q Consensus 415 ~~~L-g~G~~g~Vy~~~~~-------~g~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h--~niv~l~~~~~~~-- 480 (618)
.+.| +.|....+|+.... +++.+++|....... .......+.+|+..++.+. + -.+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3467 88999999998764 267788888754320 0000123455666665553 2 2466677776654
Q ss_pred -CeEEEEEEecCCCChhh
Q 007107 481 -GQRLLVYEYVGNGNLHD 497 (618)
Q Consensus 481 -~~~~lv~e~~~~gsL~~ 497 (618)
+..++||||+++..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 45689999999876653
No 418
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.00 E-value=6.6e-05 Score=76.12 Aligned_cols=143 Identities=17% Similarity=0.270 Sum_probs=78.3
Q ss_pred ceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhc-----CCCCcccccc-e--EEeeCCeEEEEE
Q 007107 416 FLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSR-----LRHPNIVTLA-G--YCAEHGQRLLVY 487 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~-----l~h~niv~l~-~--~~~~~~~~~lv~ 487 (618)
+.|+.|..+.||+....+| .+++|+..... ..+..|...++. +..|.++... | +....+..+++|
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~------~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~ 110 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE------KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVY 110 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH------HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH------HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEE
Confidence 3566677899999987655 48899886521 112223333222 2334444321 1 223467789999
Q ss_pred EecCCCChh--------------hhhhcccC-C--C-------CCCCHHHH-----------------------------
Q 007107 488 EYVGNGNLH--------------DMLHFADD-S--S-------KNLTWNAR----------------------------- 514 (618)
Q Consensus 488 e~~~~gsL~--------------~~l~~~~~-~--~-------~~l~~~~~----------------------------- 514 (618)
||++|..+. ..+|.... . . ....|...
T Consensus 111 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 190 (346)
T 2q83_A 111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQ 190 (346)
T ss_dssp ECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred EeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Confidence 999986542 01111110 0 0 00122211
Q ss_pred --HHHHHHHHHHHHHHhh----------cCCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 515 --VRVALGTARALEYLHE----------VCLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 515 --~~i~~~i~~~L~~LH~----------~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
..+..++..++++|++ ...+.++|+|+++.|||++.++.+.|+||+.+...
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~g 253 (346)
T 2q83_A 191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFD 253 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEEC
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcccC
Confidence 0111223445666663 01248999999999999988889999999988543
No 419
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.79 E-value=2.6e-05 Score=81.83 Aligned_cols=78 Identities=8% Similarity=0.021 Sum_probs=48.4
Q ss_pred CCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccccccccccccccCccccccC---CccccchhhhHHHHHHHHH
Q 007107 534 PSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQVSTQMVGAFGYSAPEFALSG---IYTVKSDVYSFGVVMLELL 610 (618)
Q Consensus 534 ~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlG~il~ell 610 (618)
+.++|+|++|.|||+++++ ++|+||+.+...+...+-...-..-...|++|+..... ......++.+....+|+.+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 310 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLF 310 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 3799999999999999876 99999998865432211110000011346666655321 1223455668888888877
Q ss_pred hC
Q 007107 611 TG 612 (618)
Q Consensus 611 tg 612 (618)
++
T Consensus 311 ~~ 312 (420)
T 2pyw_A 311 NK 312 (420)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 420
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.75 E-value=8.4e-06 Score=73.53 Aligned_cols=83 Identities=5% Similarity=0.100 Sum_probs=50.3
Q ss_pred CcceEecccccccccCCcccccCCCccEEEeecCC-CCCchhhhhcCC----CCCCeEEcccCc-CCCCCCCCcccCCCc
Q 007107 130 NLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNS-LTQSIGDIFGNL----AGLATLDLSFNN-FSGDLPNSFISLSNI 203 (618)
Q Consensus 130 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~g~~p~~~~~l~~L 203 (618)
+|+.|||+++.++..--..+.++++|+.|+|+++. ++..--..++.+ ++|++|+|+++. ++..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555554433456677777777777774 664444455554 367777777763 654333345566777
Q ss_pred Ceeeecccc
Q 007107 204 SSLYLQNNQ 212 (618)
Q Consensus 204 ~~L~l~~N~ 212 (618)
++|+|++..
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 777777654
No 421
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.75 E-value=0.00017 Score=71.91 Aligned_cols=140 Identities=15% Similarity=0.209 Sum_probs=89.9
Q ss_pred ccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC---CCcccccceEEeeCCeEEEEEEec
Q 007107 414 QEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR---HPNIVTLAGYCAEHGQRLLVYEYV 490 (618)
Q Consensus 414 ~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~ 490 (618)
..+.|+.|....+|+... +++.+++|+.... ....+..|.+.++.+. ...+.+++.+....+..++||||+
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l 113 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL 113 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence 345689999999999986 4677888876532 2456778877777663 356788888888888999999999
Q ss_pred CCCChhh-----------hhhcccC-C-----------------CCCCCHHHHH---HHHHH----------------HH
Q 007107 491 GNGNLHD-----------MLHFADD-S-----------------SKNLTWNARV---RVALG----------------TA 522 (618)
Q Consensus 491 ~~gsL~~-----------~l~~~~~-~-----------------~~~l~~~~~~---~i~~~----------------i~ 522 (618)
++..+.. .+|.... . ...-+|.+.. ++..+ ++
T Consensus 114 ~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~ 193 (312)
T 3jr1_A 114 NKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIV 193 (312)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHH
T ss_pred cCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Confidence 9876421 1222111 0 0012444321 11111 11
Q ss_pred HH-HHHHhh-cCCCCceecCCCCCCeeecCCCCcEEeecc
Q 007107 523 RA-LEYLHE-VCLPSVVHRNFKSANILLDDELNPHLSDCG 560 (618)
Q Consensus 523 ~~-L~~LH~-~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfg 560 (618)
.- .+.|.. ...|.++|+|+.+.|++++.++ +.|+|+.
T Consensus 194 ~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 194 QIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11 223321 1235799999999999999887 8899984
No 422
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.69 E-value=8.7e-05 Score=77.12 Aligned_cols=77 Identities=17% Similarity=0.110 Sum_probs=46.4
Q ss_pred cceeccCccceEEEEEEc-CCcEEEEEEcCcccc--cH---HHHHHHHHHHHHhhcCCC--Cc-ccccceEEeeCCeEEE
Q 007107 415 EFLIGEGSLGRVYRAEFA-NGKIMAVKKIDNAAL--SL---QEEDNFLEAVSNMSRLRH--PN-IVTLAGYCAEHGQRLL 485 (618)
Q Consensus 415 ~~~Lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~---~~~~~~~~e~~~l~~l~h--~n-iv~l~~~~~~~~~~~l 485 (618)
.+.+|.|..+.||++... +++.+++|....... .. ....++..|.+.++.+.. +. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 447899999999999754 467899997653211 00 012345667777766532 33 3344433 3455689
Q ss_pred EEEecCCC
Q 007107 486 VYEYVGNG 493 (618)
Q Consensus 486 v~e~~~~g 493 (618)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 423
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.64 E-value=3.5e-06 Score=77.51 Aligned_cols=67 Identities=24% Similarity=0.238 Sum_probs=31.7
Q ss_pred cccccCCCCCCEEeecCC-CCCCCCC----CCC--CCCcceEeccccccccc----CCcccccCCCccEEEeecCCCC
Q 007107 100 GYLLSDLLSLRKFDLSGN-SIHDTIP----YQL--PPNLTSLNLASNNFSGN----LPYSIASMVSLSYLNVSRNSLT 166 (618)
Q Consensus 100 ~~~l~~l~~L~~L~L~~N-~l~~~~p----~~~--~~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 166 (618)
...+.+-+.|+.|+|++| .|...-- ..+ -+.|+.|+|++|+|... +-..+..-+.|+.|+|++|+|+
T Consensus 34 ~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 34 NRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 334445566777777664 5542100 111 14555555555555522 2222333445555555555555
No 424
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.62 E-value=0.00017 Score=71.21 Aligned_cols=78 Identities=22% Similarity=0.306 Sum_probs=53.4
Q ss_pred CcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCC---cccccceEEeeCCeEEEEEE
Q 007107 412 FSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHP---NIVTLAGYCAEHGQRLLVYE 488 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e 488 (618)
....+.+|.|..+.||+.+..||+.|++|+....... ....|..|++.|+.+.-. -+.+++++ +..++|||
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~--~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e 90 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPA--LDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAME 90 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC--CTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEE
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcc--hhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEE
Confidence 4455679999999999999999999999987543322 123567788777766321 23444443 23478999
Q ss_pred ecCCCCh
Q 007107 489 YVGNGNL 495 (618)
Q Consensus 489 ~~~~gsL 495 (618)
|++++..
T Consensus 91 ~l~~~~~ 97 (288)
T 3f7w_A 91 WVDERPP 97 (288)
T ss_dssp CCCCCCC
T ss_pred eecccCC
Confidence 9987643
No 425
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.59 E-value=9.7e-05 Score=63.44 Aligned_cols=56 Identities=20% Similarity=0.310 Sum_probs=36.9
Q ss_pred EEeecCCCCC-CCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeecCCCC
Q 007107 111 KFDLSGNSIH-DTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLT 166 (618)
Q Consensus 111 ~L~L~~N~l~-~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 166 (618)
.++.+++.|+ ..+|..++++|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555555554 3566667777888888888887555556666667777666666654
No 426
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.52 E-value=2.5e-05 Score=71.87 Aligned_cols=110 Identities=19% Similarity=0.260 Sum_probs=77.4
Q ss_pred eCCCEEEEEcCCC-CCcc----cccccccCCCCCCEEeecCCCCCCCCCCCCC------CCcceEeccccccccc----C
Q 007107 81 EGSAVVSIDISGL-GLSG----TMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP------PNLTSLNLASNNFSGN----L 145 (618)
Q Consensus 81 ~~~~v~~l~l~~~-~l~~----~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~------~~L~~L~L~~N~l~~~----~ 145 (618)
.+..++.|+|++| +|.. .+.+.+..-+.|+.|+|++|.|...--..+. +.|+.|+|++|+|... +
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~al 118 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 118 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHH
Confidence 3567999999986 7753 3566778889999999999999844333332 7899999999999953 3
Q ss_pred CcccccCCCccEEEeecCC---CCC----chhhhhcCCCCCCeEEcccCcCC
Q 007107 146 PYSIASMVSLSYLNVSRNS---LTQ----SIGDIFGNLAGLATLDLSFNNFS 190 (618)
Q Consensus 146 p~~~~~l~~L~~L~L~~N~---l~~----~~p~~~~~l~~L~~L~l~~N~l~ 190 (618)
-+.+..-+.|++|+|++|. +.. .+...+..-+.|+.|+|+.|.+.
T Consensus 119 a~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 119 LRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 3345555678888887653 332 13345555677777777766543
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.43 E-value=6.2e-05 Score=67.85 Aligned_cols=37 Identities=16% Similarity=0.098 Sum_probs=26.8
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeecCCC-CC
Q 007107 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNS-IH 120 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~-l~ 120 (618)
.++.|||+++.++..--..+..+++|+.|+|+++. |+
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~It 99 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIE 99 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccC
Confidence 68888888887766555566777777777777774 54
No 428
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.40 E-value=0.00042 Score=71.82 Aligned_cols=131 Identities=12% Similarity=0.178 Sum_probs=68.1
Q ss_pred cccccCCCCCCEEeecCCCCCCCCCCCC--CCCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCC
Q 007107 100 GYLLSDLLSLRKFDLSGNSIHDTIPYQL--PPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLA 177 (618)
Q Consensus 100 ~~~l~~l~~L~~L~L~~N~l~~~~p~~~--~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 177 (618)
..+|.++..|+.+.+.++..+ .-...+ .++|+.+.+. +.++..-...|.++.+|+.++|..| ++.+-..+|.++.
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~ 334 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCE 334 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCC
Confidence 445666777777777655432 111122 2567777765 4455444556667777777777643 5544455677777
Q ss_pred CCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccccccCCCCccEEEcccccc
Q 007107 178 GLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLNVFSGLPLTTLNVANNHF 235 (618)
Q Consensus 178 ~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l 235 (618)
+|+.+.|..+ ++..-...|.++.+|+.+++.+|..... ..+....|+.+.+..|.+
T Consensus 335 ~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~~-~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 335 QLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQWN-AISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHHH-TCBCCCCC----------
T ss_pred CCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeehh-hhhccCCCCEEEeCCCCE
Confidence 7777777544 5423345566777777777766654321 112233466665555443
No 429
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.13 E-value=0.0018 Score=66.64 Aligned_cols=109 Identities=14% Similarity=0.148 Sum_probs=59.4
Q ss_pred cccccCCCCCCEEeecCCCCCCCCCCCC--CCCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCC
Q 007107 100 GYLLSDLLSLRKFDLSGNSIHDTIPYQL--PPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLA 177 (618)
Q Consensus 100 ~~~l~~l~~L~~L~L~~N~l~~~~p~~~--~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 177 (618)
...+....+|+.+.+..+ +.......+ ..+|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++......|.+++
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~ 286 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCS 286 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCT
T ss_pred ecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccc
Confidence 345555666666666544 221111111 256666666554 44344455666666666666433 4434445566666
Q ss_pred CCCeEEcccCcCCCCCCCCcccCCCcCeeeeccc
Q 007107 178 GLATLDLSFNNFSGDLPNSFISLSNISSLYLQNN 211 (618)
Q Consensus 178 ~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N 211 (618)
+|+.+.+.+|.++..-...|.++.+|+.+.|..+
T Consensus 287 ~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 287 NLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp TCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred ccccccccccccceehhhhhcCCCCCCEEEcCcc
Confidence 6666666666665333455666666666666543
No 430
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.11 E-value=0.0097 Score=59.40 Aligned_cols=145 Identities=15% Similarity=0.181 Sum_probs=76.7
Q ss_pred cceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcC-----CCCcccccc-e--EEeeCCeEEEE
Q 007107 415 EFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRL-----RHPNIVTLA-G--YCAEHGQRLLV 486 (618)
Q Consensus 415 ~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~-~--~~~~~~~~~lv 486 (618)
.+.|+.|....+|+....+| .+++|...... ....+..|+..++.+ .-|.++... | +....+..+++
T Consensus 27 ~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~----~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l 101 (322)
T 2ppq_A 27 YKGIAEGVENSNFLLHTTKD-PLILTLYEKRV----EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAAL 101 (322)
T ss_dssp EEEECC---EEEEEEEESSC-CEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEE
T ss_pred eeccCCCcccceEEEEeCCc-cEEEEEeCCCC----CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEE
Confidence 34577888899999987666 67888876521 112233444444433 223333221 1 12234677999
Q ss_pred EEecCCCChhh--------------hhhcccCC-CC----CC---CHHHHHH------------HHHHHHHHHHHHhhc-
Q 007107 487 YEYVGNGNLHD--------------MLHFADDS-SK----NL---TWNARVR------------VALGTARALEYLHEV- 531 (618)
Q Consensus 487 ~e~~~~gsL~~--------------~l~~~~~~-~~----~l---~~~~~~~------------i~~~i~~~L~~LH~~- 531 (618)
++|++|..+.. .+|..... .. .. .|..... +...+.+.++++++.
T Consensus 102 ~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~ 181 (322)
T 2ppq_A 102 ISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHW 181 (322)
T ss_dssp EECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHC
T ss_pred EEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhC
Confidence 99998865321 01111000 00 01 1221100 001134455666532
Q ss_pred ---CCCCceecCCCCCCeeecCCCCcEEeecccccc
Q 007107 532 ---CLPSVVHRNFKSANILLDDELNPHLSDCGLAAL 564 (618)
Q Consensus 532 ---~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~ 564 (618)
..++++|+|+.+.|||+++++.+.|+||+.+..
T Consensus 182 ~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 182 PKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp CCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 123689999999999999876568999998753
No 431
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.05 E-value=0.001 Score=66.00 Aligned_cols=30 Identities=17% Similarity=0.202 Sum_probs=25.3
Q ss_pred CceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 535 SVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 535 ~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
.++|+|+.+.||+ ..++.+.++||..+...
T Consensus 174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 174 AACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred eeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 5799999999999 56667899999987644
No 432
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.05 E-value=0.0054 Score=61.49 Aligned_cols=143 Identities=17% Similarity=0.208 Sum_probs=77.9
Q ss_pred eeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCC--cccccceE-----EeeCCeEEEEEEe
Q 007107 417 LIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHP--NIVTLAGY-----CAEHGQRLLVYEY 489 (618)
Q Consensus 417 ~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~~-----~~~~~~~~lv~e~ 489 (618)
.++ |....||+....+|+.+++|........ ...+..|...++.+... .+.+++.. ....+..+++|||
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~---~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~ 108 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWT---ADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPS 108 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTSC---HHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEEC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCCC---HHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEe
Confidence 466 8888999988777878999998643222 23344555555444211 13333332 2335667899999
Q ss_pred cCCCChh-----hh---------hhcccCC-----CCCCCHHHH----HHH---------------HHHHHHHHHHHhhc
Q 007107 490 VGNGNLH-----DM---------LHFADDS-----SKNLTWNAR----VRV---------------ALGTARALEYLHEV 531 (618)
Q Consensus 490 ~~~gsL~-----~~---------l~~~~~~-----~~~l~~~~~----~~i---------------~~~i~~~L~~LH~~ 531 (618)
+++..+. .+ +|..... ....++... ..+ ...+.+.++.+.+.
T Consensus 109 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (328)
T 1zyl_A 109 VGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAH 188 (328)
T ss_dssp CCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9875432 00 1111000 011222111 001 11111223333321
Q ss_pred ----CCCCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 532 ----CLPSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 532 ----~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
..+.++|+|+++.|||++ + .+.|+||+.+...
T Consensus 189 ~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g 224 (328)
T 1zyl_A 189 WREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNG 224 (328)
T ss_dssp CCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred hhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence 123579999999999999 4 8999999887543
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.04 E-value=0.00074 Score=57.82 Aligned_cols=37 Identities=22% Similarity=0.178 Sum_probs=21.0
Q ss_pred CCCeEEcccCcCCCCCCCCcccCCCcCeeeecccccc
Q 007107 178 GLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVT 214 (618)
Q Consensus 178 ~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 214 (618)
+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4566666666666333344555666666666666553
No 434
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.03 E-value=0.0028 Score=63.84 Aligned_cols=33 Identities=30% Similarity=0.293 Sum_probs=27.9
Q ss_pred CCceecCCCCCCeeecCC----CCcEEeeccccccCC
Q 007107 534 PSVVHRNFKSANILLDDE----LNPHLSDCGLAALTP 566 (618)
Q Consensus 534 ~~iiH~Dlkp~NiLl~~~----~~~kl~Dfgl~~~~~ 566 (618)
+.++|+|+.+.|||++.+ +.+.|+||+.+...+
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~ 219 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH 219 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence 378999999999999874 678999999886544
No 435
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.02 E-value=0.0026 Score=65.83 Aligned_cols=142 Identities=14% Similarity=0.154 Sum_probs=100.3
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCC--CCCcceEecccccccccCCcccccCCCccEEEee
Q 007107 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQL--PPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~--~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (618)
.++.+.+.+ .+...-...+..+..|+.+.+..|... .....+ ...|+.+.+..+.+. ...+..+.+|+.+.+.
T Consensus 231 ~l~~i~ip~-~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~ 305 (394)
T 4fs7_A 231 GVKNIIIPD-SFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLL 305 (394)
T ss_dssp CCCEEEECT-TCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEEC
T ss_pred CCceEEECC-CceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccc
Confidence 466677754 344445567889999999999887554 222222 377888887766533 3567788999999997
Q ss_pred cCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeeccccccccc-cccCC-CCccEEEcccc
Q 007107 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSL-NVFSG-LPLTTLNVANN 233 (618)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~-~~L~~L~l~~N 233 (618)
++ ++.+-..+|.++.+|+.++|.++ ++..-...|.++.+|+.+.+..| ++..- ..+.+ .+|+.+++..|
T Consensus 306 ~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 306 DS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred cc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 65 66566678999999999999754 66444677889999999999876 55432 23444 46999988755
No 436
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.95 E-value=0.0032 Score=65.10 Aligned_cols=54 Identities=13% Similarity=0.123 Sum_probs=32.6
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCC--CCCcceEeccc
Q 007107 83 SAVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQL--PPNLTSLNLAS 138 (618)
Q Consensus 83 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~--~~~L~~L~L~~ 138 (618)
..++.++|.+ +++.+-..+|.++++|+.++|.+| ++..-...+ .++|+.+.+..
T Consensus 71 ~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~ 126 (394)
T 4fs7_A 71 RKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPL 126 (394)
T ss_dssp TTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred CCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccC
Confidence 3678888864 466666678888888888888755 441111122 25565555543
No 437
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.83 E-value=0.0021 Score=66.42 Aligned_cols=124 Identities=14% Similarity=0.170 Sum_probs=84.2
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeecCCCCCCCCCCCCC--CCcceEecccccccccCCcccccCCCccEEEee
Q 007107 84 AVVSIDISGLGLSGTMGYLLSDLLSLRKFDLSGNSIHDTIPYQLP--PNLTSLNLASNNFSGNLPYSIASMVSLSYLNVS 161 (618)
Q Consensus 84 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 161 (618)
.++.+.+.++ +......+|.+++.|+.+.+. +.++..-...|. .+|+.++|..| ++..-...|.+|.+|+.+.|.
T Consensus 266 ~L~~i~lp~~-~~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip 342 (394)
T 4gt6_A 266 YLASVKMPDS-VVSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIP 342 (394)
T ss_dssp SCCEEECCTT-CCEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEC
T ss_pred cccEEecccc-cceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEEC
Confidence 3555666543 333445688899999999996 455523233333 79999999865 775667889999999999997
Q ss_pred cCCCCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeecccccc
Q 007107 162 RNSLTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVT 214 (618)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 214 (618)
.+ ++.+-..+|.++++|+.+++.+|.... ..+..+.+|+.+.+..|.+.
T Consensus 343 ~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 343 SS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp TT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC-----------
T ss_pred cc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCEE
Confidence 55 776667899999999999999987652 35677789999998877653
No 438
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.74 E-value=0.0032 Score=65.86 Aligned_cols=73 Identities=14% Similarity=0.152 Sum_probs=47.1
Q ss_pred cceeccCccceEEEEEEcC--------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcc-cccceEEeeCCeEEE
Q 007107 415 EFLIGEGSLGRVYRAEFAN--------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNI-VTLAGYCAEHGQRLL 485 (618)
Q Consensus 415 ~~~Lg~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~l 485 (618)
.+.|+.|....+|++...+ ++.+++|+..... . ...+.+|...++.+...++ .++++.+.+ .+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~-~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~ 149 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-T---ESHLVAESVIFTLLSERHLGPKLYGIFSG----GR 149 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC-C---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC-c---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CE
Confidence 4468889899999998763 4788888874321 1 1334467777766643333 556665432 38
Q ss_pred EEEecCCCCh
Q 007107 486 VYEYVGNGNL 495 (618)
Q Consensus 486 v~e~~~~gsL 495 (618)
|+||+++.++
T Consensus 150 v~e~l~G~~l 159 (429)
T 1nw1_A 150 LEEYIPSRPL 159 (429)
T ss_dssp EECCCCEEEC
T ss_pred EEEEeCCccc
Confidence 9999986443
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.62 E-value=0.0059 Score=62.51 Aligned_cols=142 Identities=15% Similarity=0.158 Sum_probs=79.4
Q ss_pred ceeccCccceEEEEEEcC--------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-CCcccccceEEeeCCeEEEE
Q 007107 416 FLIGEGSLGRVYRAEFAN--------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLLV 486 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 486 (618)
+.+..|-...+|+....+ ++.+++|+..... .....+.+|..+++.+. +.-..++++++.+ .+|
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~---~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v 128 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL---QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRL 128 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc---chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccE
Confidence 457778889999998752 4788998864321 12344557877776664 2223556665543 299
Q ss_pred EEecCCCChhhh-----------------hhcccC-CCCCCC--HHHHHHHHHHHHH-------------------HHHH
Q 007107 487 YEYVGNGNLHDM-----------------LHFADD-SSKNLT--WNARVRVALGTAR-------------------ALEY 527 (618)
Q Consensus 487 ~e~~~~gsL~~~-----------------l~~~~~-~~~~l~--~~~~~~i~~~i~~-------------------~L~~ 527 (618)
|||+++..+..- +|.... ...... +.++.++..++.. .++.
T Consensus 129 ~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (379)
T 3feg_A 129 EQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGN 208 (379)
T ss_dssp EECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHH
T ss_pred EEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHH
Confidence 999987654310 011110 011122 3444444443321 2333
Q ss_pred Hh----hc-CCCCceecCCCCCCeeecCC----CCcEEeecccccc
Q 007107 528 LH----EV-CLPSVVHRNFKSANILLDDE----LNPHLSDCGLAAL 564 (618)
Q Consensus 528 LH----~~-~~~~iiH~Dlkp~NiLl~~~----~~~kl~Dfgl~~~ 564 (618)
|. .. ....++|+|+.+.|||++++ +.+.++||..+..
T Consensus 209 L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 209 LRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 32 21 11257999999999999876 7899999998853
No 440
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.51 E-value=0.011 Score=59.63 Aligned_cols=32 Identities=19% Similarity=0.283 Sum_probs=27.8
Q ss_pred CCceecCCCCCCeeecCCCCcEEeeccccccC
Q 007107 534 PSVVHRNFKSANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 534 ~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
..++|+|+.+.||++++++.+.|+||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 36899999999999998888999999877543
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.50 E-value=0.011 Score=62.24 Aligned_cols=74 Identities=11% Similarity=0.007 Sum_probs=45.2
Q ss_pred cceeccCccceEEEEEEcC-CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcc-cccceEEeeCCeEEEEEEecCC
Q 007107 415 EFLIGEGSLGRVYRAEFAN-GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNI-VTLAGYCAEHGQRLLVYEYVGN 492 (618)
Q Consensus 415 ~~~Lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~ 492 (618)
.+.|+.|-...+|+....+ ++.+++|+........ .+..+|..+++.+...++ .++++.+. + .+|+||+++
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~---idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G 185 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI---INREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDG 185 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC---SCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCS
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh---cCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCC
Confidence 4568889999999998875 5788888874322111 112466777776654444 45666652 2 259999987
Q ss_pred CCh
Q 007107 493 GNL 495 (618)
Q Consensus 493 gsL 495 (618)
.++
T Consensus 186 ~~l 188 (458)
T 2qg7_A 186 YAL 188 (458)
T ss_dssp EEC
T ss_pred ccC
Confidence 544
No 442
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.42 E-value=0.015 Score=59.53 Aligned_cols=129 Identities=14% Similarity=0.150 Sum_probs=74.2
Q ss_pred cccCCCCCCEEeecCCCCC-CCCCCCCCCCcceEecccccccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCC
Q 007107 102 LLSDLLSLRKFDLSGNSIH-DTIPYQLPPNLTSLNLASNNFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLA 180 (618)
Q Consensus 102 ~l~~l~~L~~L~L~~N~l~-~~~p~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 180 (618)
.+.....+..+.+..+.-. +........+|+.+.+..+ ++......+.++.+|+.+.+..+ ++.+-..+|.++.+|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~ 266 (379)
T 4h09_A 189 SYPAAKTGTEFTIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALK 266 (379)
T ss_dssp ECCTTCCCSEEECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCC
T ss_pred cccccccccccccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhc
Confidence 3444445555554433221 1111222266777777544 34344556677777777777665 5545556777777777
Q ss_pred eEEcccCcCCCCCCCCcccCCCcCeeeecccccccccc-ccCC-CCccEEEcccc
Q 007107 181 TLDLSFNNFSGDLPNSFISLSNISSLYLQNNQVTGSLN-VFSG-LPLTTLNVANN 233 (618)
Q Consensus 181 ~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~-~~L~~L~l~~N 233 (618)
.+.+..+ +...-...|.++.+|+.+.+.+|.++..-. .+.. .+|+.++|..|
T Consensus 267 ~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 267 TLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp EEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred ccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc
Confidence 7777544 442334556777778888777777665332 2333 45777777544
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.15 E-value=0.015 Score=59.28 Aligned_cols=73 Identities=10% Similarity=0.039 Sum_probs=40.2
Q ss_pred ceeccCccceEEEEEEcC---------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCc-ccccceEEeeCCeEEE
Q 007107 416 FLIGEGSLGRVYRAEFAN---------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPN-IVTLAGYCAEHGQRLL 485 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~~---------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~l 485 (618)
+.++.|....+|+....+ ++.+++|+........ .....|.+.++.+...+ +.++++.. . -++
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~---~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~ 111 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDEL---YNTISEFEVYKTMSKYKIAPQLLNTF--N--GGR 111 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGT---SCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccce---ecHHHHHHHHHHHHhcCCCCceEEec--C--CcE
Confidence 457788889999998764 2678888875432111 11245555555553223 34555443 2 368
Q ss_pred EEEecCCCCh
Q 007107 486 VYEYVGNGNL 495 (618)
Q Consensus 486 v~e~~~~gsL 495 (618)
||||+++..+
T Consensus 112 v~e~i~G~~l 121 (369)
T 3c5i_A 112 IEEWLYGDPL 121 (369)
T ss_dssp EEECCCSEEC
T ss_pred EEEEecCCcC
Confidence 9999987543
No 444
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=95.57 E-value=0.0092 Score=38.18 Aligned_cols=31 Identities=35% Similarity=0.524 Sum_probs=20.9
Q ss_pred CCCcceeehhHHHHHHHHHHHHHHHHHHHHh
Q 007107 299 ELPAGAIVGIVLGAVFLVALALLALYFCIRK 329 (618)
Q Consensus 299 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 329 (618)
....+.|+|++++.+..+++++.+.++++||
T Consensus 7 ~ls~GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 7 GLTGGEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCceeeeehHHHHHHHHHHHHHHHHeec
Confidence 3456788899998887776665555555444
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.97 E-value=0.05 Score=55.87 Aligned_cols=144 Identities=12% Similarity=0.110 Sum_probs=79.8
Q ss_pred ceeccCccceEEEEEEcC--------CcEEEEEEcCccccc------------HH----HHHHHHHHHHHhhcCC-CCcc
Q 007107 416 FLIGEGSLGRVYRAEFAN--------GKIMAVKKIDNAALS------------LQ----EEDNFLEAVSNMSRLR-HPNI 470 (618)
Q Consensus 416 ~~Lg~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~------------~~----~~~~~~~e~~~l~~l~-h~ni 470 (618)
+.|..|-...+|+....+ ++.|.+++....... .+ ..+.+..|.++++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 356678889999988764 367888876432110 00 0112334777777664 3334
Q ss_pred cccceEEeeCCeEEEEEEecCCCChhh--h---------------hhccc-CCCCCCC--HHHHHHHHHHHH--------
Q 007107 471 VTLAGYCAEHGQRLLVYEYVGNGNLHD--M---------------LHFAD-DSSKNLT--WNARVRVALGTA-------- 522 (618)
Q Consensus 471 v~l~~~~~~~~~~~lv~e~~~~gsL~~--~---------------l~~~~-~~~~~l~--~~~~~~i~~~i~-------- 522 (618)
.++++++.. .+|+||+++.+|.. + +|... ....... +..+.++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 566666542 28999998754421 1 01110 0111222 223333433221
Q ss_pred --------------HHH----HHHhhcC-CCCceecCCCCCCeeecCC------CCcEEeeccccc
Q 007107 523 --------------RAL----EYLHEVC-LPSVVHRNFKSANILLDDE------LNPHLSDCGLAA 563 (618)
Q Consensus 523 --------------~~L----~~LH~~~-~~~iiH~Dlkp~NiLl~~~------~~~kl~Dfgl~~ 563 (618)
.-+ ++|.... ...++|+|+.+.|||++++ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 2233221 1257899999999999876 789999999875
No 446
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=94.93 E-value=0.035 Score=36.57 Aligned_cols=30 Identities=23% Similarity=0.446 Sum_probs=14.8
Q ss_pred eeehhHHHHHHHHHHHHHHHHHHHHhcccc
Q 007107 304 AIVGIVLGAVFLVALALLALYFCIRKNRRK 333 (618)
Q Consensus 304 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (618)
.|++.+++.+++++++++.+++++|||+++
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 455555555555444444444555544433
No 447
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=94.85 E-value=0.056 Score=35.70 Aligned_cols=29 Identities=21% Similarity=0.392 Sum_probs=13.8
Q ss_pred eeehhHHHHHHHHHHHHHHHHHHHHhccc
Q 007107 304 AIVGIVLGAVFLVALALLALYFCIRKNRR 332 (618)
Q Consensus 304 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (618)
.|++.+++.+++++++++.+++++|||++
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 34555555444444444444444554433
No 448
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.93 E-value=0.14 Score=52.99 Aligned_cols=74 Identities=8% Similarity=-0.038 Sum_probs=44.4
Q ss_pred cceeccCccceEEEEEEcC--------CcEEEEEEcCcccccHHHHHHHHHHHHHhhcCC-CCcccccceEEeeCCeEEE
Q 007107 415 EFLIGEGSLGRVYRAEFAN--------GKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLR-HPNIVTLAGYCAEHGQRLL 485 (618)
Q Consensus 415 ~~~Lg~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 485 (618)
.+.+..|-...+|+....+ ++.+++|+....... ..+..+|..+++.+. +.-..++++.+ . -++
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~---~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~ 147 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK---FYDSKVELDVFRYLSNINIAPNIIADF--P--EGR 147 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C---CCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch---hcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCE
Confidence 3467788899999998763 578899887543211 111234555555543 22234455433 2 378
Q ss_pred EEEecCCCCh
Q 007107 486 VYEYVGNGNL 495 (618)
Q Consensus 486 v~e~~~~gsL 495 (618)
|+||+++..|
T Consensus 148 I~efI~G~~l 157 (424)
T 3mes_A 148 IEEFIDGEPL 157 (424)
T ss_dssp EEECCCSEEC
T ss_pred EEEEeCCccC
Confidence 9999998654
No 449
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=93.45 E-value=0.094 Score=34.45 Aligned_cols=27 Identities=22% Similarity=0.400 Sum_probs=13.0
Q ss_pred ceeehhHHHHHHHHHHHHHHHHHHHHhc
Q 007107 303 GAIVGIVLGAVFLVALALLALYFCIRKN 330 (618)
Q Consensus 303 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (618)
..+++.++|.+ +++++.+.+.++.|||
T Consensus 12 ~~Ia~~vVGvl-l~vi~~l~~~~~~RRR 38 (44)
T 2jwa_A 12 TSIISAVVGIL-LVVVLGVVFGILIKRR 38 (44)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHH-HHHHHHHHHHhheehh
Confidence 45677777733 3333333333344443
No 450
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=92.95 E-value=0.25 Score=45.60 Aligned_cols=99 Identities=14% Similarity=0.102 Sum_probs=64.3
Q ss_pred CChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccccCCCCCccc
Q 007107 493 GNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAALTPNTERQV 572 (618)
Q Consensus 493 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~~~~~~~~~~ 572 (618)
-+|.++++. .+.++++.++|.++.|.+.+|.-+-.... . ..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~---~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 33 LSLEEILRL---YNQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred ccHHHHHHH---cCCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc---------
Confidence 378888874 36789999999999999998877622111 1 1333457899999999887763 1110
Q ss_pred cccccccccccCccccccCCccccchhhhHHHHHHHHHh
Q 007107 573 STQMVGAFGYSAPEFALSGIYTVKSDVYSFGVVMLELLT 611 (618)
Q Consensus 573 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt 611 (618)
.....+.|||... ...+.+.=|||||+++|.-+-
T Consensus 98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp -------------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence 0112366888763 344678889999999998775
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=92.25 E-value=0.21 Score=46.06 Aligned_cols=87 Identities=14% Similarity=0.129 Sum_probs=64.4
Q ss_pred CCCcccccceEEeeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCceecCCCCCC
Q 007107 466 RHPNIVTLAGYCAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSAN 545 (618)
Q Consensus 466 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iiH~Dlkp~N 545 (618)
.||++++. .+-.+++...+.++.-+ +...+-. -..++...+++++.+|+...++++++ +|--|.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~-----ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDN-----IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGG-----GGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHH-----HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 68888876 56666666666665433 2222221 23478889999999999988777766 888999999
Q ss_pred eeecCCCCcEEeeccccccC
Q 007107 546 ILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 546 iLl~~~~~~kl~Dfgl~~~~ 565 (618)
++++.++.+++.-.|+...+
T Consensus 110 L~f~~~~~p~i~~RGik~~l 129 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVV 129 (215)
T ss_dssp EEECTTSCEEESCCEETTTB
T ss_pred EEEcCCCCEEEEEccCccCC
Confidence 99999999999988865433
No 452
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.89 E-value=0.12 Score=53.25 Aligned_cols=29 Identities=24% Similarity=0.384 Sum_probs=24.6
Q ss_pred ceecCCCCCCeee------cCCCCcEEeecccccc
Q 007107 536 VVHRNFKSANILL------DDELNPHLSDCGLAAL 564 (618)
Q Consensus 536 iiH~Dlkp~NiLl------~~~~~~kl~Dfgl~~~ 564 (618)
++|+|+.+.|||+ +++..++++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567799999998853
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=88.52 E-value=1 Score=41.51 Aligned_cols=85 Identities=13% Similarity=0.157 Sum_probs=62.4
Q ss_pred CCCcccccceEEeeCCeEEEEEEecCCC-ChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHH-HHhhcCCCCceecCCCC
Q 007107 466 RHPNIVTLAGYCAEHGQRLLVYEYVGNG-NLHDMLHFADDSSKNLTWNARVRVALGTARALE-YLHEVCLPSVVHRNFKS 543 (618)
Q Consensus 466 ~h~niv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~-~LH~~~~~~iiH~Dlkp 543 (618)
.||++ -..+-.+++...+.++.-+++ ++. .+ ..++..++++++.+|+.... +++++ +|--|.|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~-~i-------~~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFA-AI-------RKTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHH-HH-------HTSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHH-HH-------HhcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeC
Confidence 67877 444556677777777654332 222 22 34788899999999888777 66655 8889999
Q ss_pred CCeeecCCCCcEEeeccccccC
Q 007107 544 ANILLDDELNPHLSDCGLAALT 565 (618)
Q Consensus 544 ~NiLl~~~~~~kl~Dfgl~~~~ 565 (618)
+|++++.++.++|.-.|+-..+
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~l 134 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKESL 134 (219)
T ss_dssp GGEEECTTCCEEESCCEETTTB
T ss_pred ceEEEeCCCcEEEEEcCCcccC
Confidence 9999999999999988875444
No 454
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=84.51 E-value=0.14 Score=53.70 Aligned_cols=62 Identities=6% Similarity=0.030 Sum_probs=17.2
Q ss_pred cceeccCccceEEEEEEcC-CcEEEE------EEcCcccccHHHHHHHHHHHHHhhcCCCCcccccceEEee
Q 007107 415 EFLIGEGSLGRVYRAEFAN-GKIMAV------KKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAE 479 (618)
Q Consensus 415 ~~~Lg~G~~g~Vy~~~~~~-g~~vav------K~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 479 (618)
.+.+| ||.||+|.+.. ..+||+ |..+......+....|.+|..+++..+|||+++.+++...
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 33455 99999998864 357888 7666544444455678888888888999999999988754
No 455
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=76.03 E-value=4.3 Score=28.85 Aligned_cols=27 Identities=37% Similarity=0.667 Sum_probs=12.2
Q ss_pred hHHHHHHHHHHHH-HHHHHHHHhccccc
Q 007107 308 IVLGAVFLVALAL-LALYFCIRKNRRKV 334 (618)
Q Consensus 308 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 334 (618)
+++|+++.+++++ +.+++|.++++|++
T Consensus 12 ivlGg~~~lll~~glcI~ccvkcrhRrr 39 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIFFSVRSRHRRR 39 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCCSS
T ss_pred HHHhHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 4555554444333 33343554444443
No 456
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=72.78 E-value=2.2 Score=26.15 Aligned_cols=26 Identities=42% Similarity=0.793 Sum_probs=17.8
Q ss_pred CcceeehhHHHHHHHHHHHHHHHHHH
Q 007107 301 PAGAIVGIVLGAVFLVALALLALYFC 326 (618)
Q Consensus 301 ~~~~i~~~~~~~~~~~~~~~~~~~~~ 326 (618)
..+.++|++++.++..+++.+.+|++
T Consensus 5 ~~gaIaGIVvgdi~~t~~i~~~vy~~ 30 (33)
T 2l34_A 5 SPGVLAGIVVGDLVLTVLIALAVYFL 30 (33)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEeEeHHHHHHHHHHHHHHhhe
Confidence 45678888888877777665555554
No 457
>1afo_A Glycophorin A; integral membrane protein, transmembrane helix interactions, membrane protein folding; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 2kpf_A
Probab=63.41 E-value=8.5 Score=24.14 Aligned_cols=29 Identities=24% Similarity=0.316 Sum_probs=19.8
Q ss_pred eeehhHHHHHHHHHHHHHHHHHHHHhccc
Q 007107 304 AIVGIVLGAVFLVALALLALYFCIRKNRR 332 (618)
Q Consensus 304 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (618)
.++.++.++..++...+++..++.||-+|
T Consensus 11 ~i~lII~~vmaGiIG~IllI~y~I~rl~K 39 (40)
T 1afo_A 11 EITLIIFGVMAGVIGTILLISYGIRRLIK 39 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 56677777777777666667777776443
No 458
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=57.85 E-value=7.6 Score=24.95 Aligned_cols=16 Identities=25% Similarity=0.295 Sum_probs=8.7
Q ss_pred eehhHHHHHHHHHHHH
Q 007107 305 IVGIVLGAVFLVALAL 320 (618)
Q Consensus 305 i~~~~~~~~~~~~~~~ 320 (618)
+.+++++++..+++++
T Consensus 12 ~~~I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 12 NLAVIGGVAVGVVLLL 27 (41)
T ss_dssp STHHHHHHHHHHHHHH
T ss_pred eEEEEeehhHHHHHHH
Confidence 3456666665555433
No 459
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=57.48 E-value=2.5 Score=26.18 Aligned_cols=7 Identities=43% Similarity=0.895 Sum_probs=2.8
Q ss_pred eehhHHH
Q 007107 305 IVGIVLG 311 (618)
Q Consensus 305 i~~~~~~ 311 (618)
+++.++|
T Consensus 10 IaagVvg 16 (35)
T 1iij_A 10 IIATVVG 16 (35)
T ss_dssp HHHHHHH
T ss_pred eHHHHHH
Confidence 3334444
No 460
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=54.27 E-value=18 Score=24.75 Aligned_cols=24 Identities=29% Similarity=0.476 Sum_probs=13.0
Q ss_pred CcceeehhHHHHHHHHHHHHHHHH
Q 007107 301 PAGAIVGIVLGAVFLVALALLALY 324 (618)
Q Consensus 301 ~~~~i~~~~~~~~~~~~~~~~~~~ 324 (618)
+.++|++.+++..+++++++.++|
T Consensus 8 p~WiIi~svl~GLLLL~Lii~~Lw 31 (54)
T 2l8s_A 8 PLWVILLSAFAGLLLLMLLILALW 31 (54)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666655555555544444
No 461
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=51.66 E-value=1.1e+02 Score=33.24 Aligned_cols=45 Identities=20% Similarity=0.136 Sum_probs=33.9
Q ss_pred HHHHHHHHHHH--HHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 512 NARVRVALGTA--RALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 512 ~~~~~i~~~i~--~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
..+..++..+| ..+.|+=.. +|=.++||||+.+|++.-+|||..-
T Consensus 529 ~ar~nF~~SlA~~Svv~YILGl-------GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLGV-------GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC-------CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHccC-------CCCCCcceEEeCCCCEEEEeehhhh
Confidence 44555666654 346666544 5889999999999999999999873
No 462
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=50.45 E-value=2.1e+02 Score=30.62 Aligned_cols=46 Identities=17% Similarity=0.101 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHH--HHHHHHhhcCCCCceecCCCCCCeeecCCCCcEEeeccccc
Q 007107 511 WNARVRVALGTA--RALEYLHEVCLPSVVHRNFKSANILLDDELNPHLSDCGLAA 563 (618)
Q Consensus 511 ~~~~~~i~~~i~--~~L~~LH~~~~~~iiH~Dlkp~NiLl~~~~~~kl~Dfgl~~ 563 (618)
+..+..++..+| ..+.|+=.. +|=.++|||++.+|++.=+|||..-
T Consensus 454 ~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 455666666654 356677654 4888999999999999999999873
No 463
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=46.83 E-value=20 Score=24.59 Aligned_cols=25 Identities=28% Similarity=0.541 Sum_probs=13.3
Q ss_pred CCcceeehhHHHHHHHHHHHHHHHH
Q 007107 300 LPAGAIVGIVLGAVFLVALALLALY 324 (618)
Q Consensus 300 ~~~~~i~~~~~~~~~~~~~~~~~~~ 324 (618)
.+.+++++.+++..++++++++++|
T Consensus 10 vp~wiIi~svl~GLllL~li~~~Lw 34 (54)
T 2knc_A 10 IPIWWVLVGVLGGLLLLTILVLAMW 34 (54)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556555555555554444444
No 464
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=45.12 E-value=10 Score=26.94 Aligned_cols=33 Identities=15% Similarity=0.257 Sum_probs=25.5
Q ss_pred eeehhHHHHHHHHHHHHHHHHHHHHhccccccC
Q 007107 304 AIVGIVLGAVFLVALALLALYFCIRKNRRKVSG 336 (618)
Q Consensus 304 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (618)
+++|.+++.+++..+.+++..-|++|+|+..+.
T Consensus 12 ivlGg~~~lll~~glcI~ccvkcrhRrrqAeRM 44 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIFFSVRSRHRRRQAERM 44 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCCSSSCTTS
T ss_pred HHHhHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 688888888888888888777777777766543
No 465
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=44.06 E-value=19 Score=23.35 Aligned_cols=25 Identities=28% Similarity=0.541 Sum_probs=11.9
Q ss_pred CCcceeehhHHHHHHHHHHHHHHHH
Q 007107 300 LPAGAIVGIVLGAVFLVALALLALY 324 (618)
Q Consensus 300 ~~~~~i~~~~~~~~~~~~~~~~~~~ 324 (618)
.+.++++..+++..+++++++.++|
T Consensus 8 vp~wiIi~s~l~GLllL~li~~~Lw 32 (42)
T 2k1a_A 8 IPIWWVLVGVLGGLLLLTILVLAMW 32 (42)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555554444444433
No 466
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=43.80 E-value=29 Score=22.68 Aligned_cols=25 Identities=16% Similarity=0.113 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccc
Q 007107 309 VLGAVFLVALALLALYFCIRKNRRK 333 (618)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (618)
+.+.++.+++++++.....-..||+
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RRR 38 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKRR 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhheehh
Confidence 3333334333333333333444443
No 467
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=42.90 E-value=32 Score=26.99 Aligned_cols=45 Identities=11% Similarity=0.108 Sum_probs=24.0
Q ss_pred CCCchhhhhcCCCCCCeEEcccCcCCCCCCCCcccCCCcCeeeecc
Q 007107 165 LTQSIGDIFGNLAGLATLDLSFNNFSGDLPNSFISLSNISSLYLQN 210 (618)
Q Consensus 165 l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 210 (618)
++.+-..+|.++.+|+.+.|-.+ ++..-...|.++.+|+.+.+.+
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 34444455566666666666543 2323344566666666666554
No 468
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=41.74 E-value=61 Score=25.34 Aligned_cols=48 Identities=17% Similarity=0.137 Sum_probs=35.4
Q ss_pred cccccCCcccccCCCccEEEeecCCCCCchhhhhcCCCCCCeEEcccCc
Q 007107 140 NFSGNLPYSIASMVSLSYLNVSRNSLTQSIGDIFGNLAGLATLDLSFNN 188 (618)
Q Consensus 140 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 188 (618)
.++..-...|.++++|+.+.|-.+ ++.+-..+|.++.+|+.+.+....
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 344455567888888888888765 555666788889999999887643
No 469
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=30.66 E-value=72 Score=20.83 Aligned_cols=28 Identities=18% Similarity=0.052 Sum_probs=14.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcccccc
Q 007107 308 IVLGAVFLVALALLALYFCIRKNRRKVS 335 (618)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (618)
|+.|++..+++++++....+...||++.
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhh
Confidence 3333333345555555555566666543
No 470
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=30.46 E-value=33 Score=24.54 Aligned_cols=20 Identities=30% Similarity=0.546 Sum_probs=11.0
Q ss_pred eeehhHHHHHHHHHHHHHHH
Q 007107 304 AIVGIVLGAVFLVALALLAL 323 (618)
Q Consensus 304 ~i~~~~~~~~~~~~~~~~~~ 323 (618)
-+.|.+++++++++.+++++
T Consensus 18 RigGLifA~vLfi~GI~iil 37 (67)
T 2jp3_A 18 QLGGLIFGGLLCIAGIALAL 37 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred eecchhhHHHHHHHHHHHHH
Confidence 45566666666555444443
No 471
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=29.71 E-value=83 Score=20.55 Aligned_cols=7 Identities=0% Similarity=-0.311 Sum_probs=2.7
Q ss_pred HHHHHHH
Q 007107 322 ALYFCIR 328 (618)
Q Consensus 322 ~~~~~~~ 328 (618)
+++-.++
T Consensus 33 ~~~RRr~ 39 (44)
T 2ks1_B 33 LFMRRRH 39 (44)
T ss_dssp HHHHTTT
T ss_pred HHhhhhH
Confidence 3333343
No 472
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=28.58 E-value=4.2e+02 Score=25.81 Aligned_cols=144 Identities=17% Similarity=0.171 Sum_probs=70.9
Q ss_pred CcccceeccCccceEEEEEEcCCcEEEEEEcCcccccHHHHHHHHHHHHHhhcCCCCcc--cccc---------------
Q 007107 412 FSQEFLIGEGSLGRVYRAEFANGKIMAVKKIDNAALSLQEEDNFLEAVSNMSRLRHPNI--VTLA--------------- 474 (618)
Q Consensus 412 ~~~~~~Lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni--v~l~--------------- 474 (618)
+...+....|. +.||.+.. ++..|+||-.. ....+.+-.++...-.+.-|+. +..-
T Consensus 71 v~~I~~s~~Gs-tgvff~~t-d~~~~VVK~s~-----~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~ 143 (342)
T 1cja_A 71 FKGIERSEKGT-EGLFFVET-ESGVFIVKRST-----NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAID 143 (342)
T ss_dssp EEEEEECCSTT-SCEEEEEE-SSCEEEEECCT-----THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHC
T ss_pred eeEEEeccCCC-CCeEEEEe-CCCEEEEeCcH-----HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhh
Confidence 33344445555 45555544 57888999542 1233344444444444455541 1110
Q ss_pred eE-----EeeCCeEEEEEEecCCCChhhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHHhhcCC-CCc-eecCCCCCCee
Q 007107 475 GY-----CAEHGQRLLVYEYVGNGNLHDMLHFADDSSKNLTWNARVRVALGTARALEYLHEVCL-PSV-VHRNFKSANIL 547 (618)
Q Consensus 475 ~~-----~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~i-iH~Dlkp~NiL 547 (618)
.. ....+..+++|||.+|..|.+.-... ....+.......+ +-+-++..+..+.. -+. -+.-=.++|||
T Consensus 144 ~~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~--~~~~f~~~~~k~L--G~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL 219 (342)
T 1cja_A 144 KSFRVITTLANQANILLMELVRGITLNKLTTTS--APEVLTKSTMQQL--GSLMALDVIVNNSDRLPIAWTNEGNLDNIM 219 (342)
T ss_dssp SSSCHHHHHTTCSEEEEEECCCEEESTTCCSSS--HHHHSCHHHHHHH--HHHHHHHHHHTCCSSSCSSSCSCCCGGGEE
T ss_pred hhhHHHHHhhcccceehhhhcCCCccccchhhh--hhhhcCHHHHHhh--chhheehhhhcCCccCcccccCCCChhheE
Confidence 00 00122467999999876655432200 0011222222211 11335666665532 111 11225789999
Q ss_pred ecCCCC-cEEeeccccccCC
Q 007107 548 LDDELN-PHLSDCGLAALTP 566 (618)
Q Consensus 548 l~~~~~-~kl~Dfgl~~~~~ 566 (618)
+++++. +.++|-+.+....
T Consensus 220 ~~~~n~~~~~IDhn~af~~~ 239 (342)
T 1cja_A 220 LSERGATVVPIDSKIIPLDA 239 (342)
T ss_dssp EESBTTCEEECSCCCCCCCS
T ss_pred EeCCCCeEEEEcCCccccCC
Confidence 986554 8899999986543
No 473
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=28.08 E-value=64 Score=23.24 Aligned_cols=21 Identities=24% Similarity=0.475 Sum_probs=11.4
Q ss_pred eeehhHHHHHHHHHHHHHHHH
Q 007107 304 AIVGIVLGAVFLVALALLALY 324 (618)
Q Consensus 304 ~i~~~~~~~~~~~~~~~~~~~ 324 (618)
-+.|.+++++++++.+++++.
T Consensus 17 RiGGLifA~vLfi~GI~iilS 37 (72)
T 2jo1_A 17 QIGGLVIAGILFILGILIVLS 37 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hccchHHHHHHHHHHHHHHHc
Confidence 345666666666555444443
No 474
>2llm_A Amyloid beta A4 protein; alzheimer'S disease, protein fibril; NMR {Homo sapiens} PDB: 2loh_A
Probab=33.55 E-value=13 Score=24.01 Aligned_cols=24 Identities=29% Similarity=0.740 Sum_probs=11.4
Q ss_pred cceeehhHHHHHHHHHHHHHHHHH
Q 007107 302 AGAIVGIVLGAVFLVALALLALYF 325 (618)
Q Consensus 302 ~~~i~~~~~~~~~~~~~~~~~~~~ 325 (618)
.+++++..++++.+..++++.+++
T Consensus 16 rga~iGL~v~gVai~~vIVvsl~m 39 (43)
T 2llm_A 16 KGAIIGLMVGGVVIATVIVITLVM 39 (43)
Confidence 345566555554444444443333
No 475
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=25.02 E-value=83 Score=23.49 Aligned_cols=16 Identities=19% Similarity=0.250 Sum_probs=9.1
Q ss_pred eeehhHHHHHHHHHHH
Q 007107 304 AIVGIVLGAVFLVALA 319 (618)
Q Consensus 304 ~i~~~~~~~~~~~~~~ 319 (618)
-+.+|++|++..++++
T Consensus 9 n~~~Iv~gvi~gilli 24 (79)
T 2knc_B 9 DILVVLLSVMGAILLI 24 (79)
T ss_dssp CSHHHHHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHHH
Confidence 3566666666555443
Done!