Query 007112
Match_columns 617
No_of_seqs 253 out of 1371
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 17:27:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007112.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007112hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 2E-207 5E-212 1673.7 46.0 540 76-617 1-541 (555)
2 1pj3_A NAD-dependent malic enz 100.0 1E-206 4E-211 1670.7 45.6 541 76-617 3-546 (564)
3 1o0s_A NAD-ME, NAD-dependent m 100.0 1E-206 3E-211 1676.1 44.1 544 72-617 33-578 (605)
4 3nv9_A Malic enzyme; rossmann 100.0 1E-121 4E-126 984.3 30.5 382 155-608 56-449 (487)
5 2a9f_A Putative malic enzyme ( 100.0 5E-113 2E-117 907.2 18.7 361 147-588 23-390 (398)
6 1vl6_A Malate oxidoreductase; 100.0 1E-107 4E-112 865.1 22.5 354 147-585 27-388 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 1.9E-86 6.5E-91 713.8 26.0 385 147-613 21-420 (439)
8 3h9u_A Adenosylhomocysteinase; 98.8 1.5E-08 5.2E-13 109.4 12.1 130 324-487 171-311 (436)
9 3gvp_A Adenosylhomocysteinase 98.8 4.9E-08 1.7E-12 105.5 14.7 169 278-485 111-318 (435)
10 1x13_A NAD(P) transhydrogenase 98.2 7.8E-07 2.7E-11 94.5 3.8 218 192-475 26-295 (401)
11 3n58_A Adenosylhomocysteinase; 97.8 0.0001 3.5E-09 80.3 12.6 129 324-486 207-346 (464)
12 3ond_A Adenosylhomocysteinase; 97.8 6.6E-05 2.3E-09 82.3 9.8 132 324-488 225-366 (488)
13 4dio_A NAD(P) transhydrogenase 97.1 0.00057 1.9E-08 73.4 7.0 110 354-481 187-322 (405)
14 1l7d_A Nicotinamide nucleotide 97.1 0.0052 1.8E-07 64.5 14.0 225 193-474 20-296 (384)
15 3p2y_A Alanine dehydrogenase/p 96.8 0.0017 6E-08 69.1 7.3 100 355-475 182-305 (381)
16 3k92_A NAD-GDH, NAD-specific g 96.4 0.03 1E-06 60.5 13.9 178 279-475 126-329 (424)
17 3d4o_A Dipicolinate synthase s 96.3 0.03 1E-06 56.4 12.4 122 335-485 133-255 (293)
18 3aoe_E Glutamate dehydrogenase 96.1 0.074 2.5E-06 57.4 14.4 186 279-487 123-332 (419)
19 4fcc_A Glutamate dehydrogenase 96.1 0.32 1.1E-05 53.0 19.4 183 278-475 140-354 (450)
20 1a4i_A Methylenetetrahydrofola 96.0 0.015 5.3E-07 60.2 8.3 96 335-474 143-239 (301)
21 3jyo_A Quinate/shikimate dehyd 95.9 0.021 7.3E-07 57.9 8.7 88 341-448 111-205 (283)
22 3l07_A Bifunctional protein fo 95.8 0.022 7.4E-07 58.7 8.6 84 336-457 140-224 (285)
23 3p2o_A Bifunctional protein fo 95.5 0.035 1.2E-06 57.2 8.6 92 336-471 139-231 (285)
24 3r3j_A Glutamate dehydrogenase 95.4 0.49 1.7E-05 51.7 17.8 190 279-487 145-368 (456)
25 3ngx_A Bifunctional protein fo 95.4 0.034 1.2E-06 57.0 8.2 82 335-456 130-212 (276)
26 1b0a_A Protein (fold bifunctio 95.3 0.033 1.1E-06 57.4 7.8 96 335-474 137-233 (288)
27 3tri_A Pyrroline-5-carboxylate 95.3 0.073 2.5E-06 53.3 10.1 121 357-506 3-127 (280)
28 4a5o_A Bifunctional protein fo 95.3 0.045 1.5E-06 56.4 8.5 96 336-475 140-237 (286)
29 2yfq_A Padgh, NAD-GDH, NAD-spe 95.2 0.18 6E-06 54.5 13.3 179 279-475 116-326 (421)
30 3aog_A Glutamate dehydrogenase 95.1 0.28 9.7E-06 53.2 14.7 176 279-475 140-344 (440)
31 4a26_A Putative C-1-tetrahydro 95.0 0.049 1.7E-06 56.4 8.0 96 333-472 141-239 (300)
32 1edz_A 5,10-methylenetetrahydr 94.9 0.03 1E-06 58.5 6.2 114 338-475 149-278 (320)
33 2bma_A Glutamate dehydrogenase 94.9 0.32 1.1E-05 53.2 14.4 178 280-475 159-372 (470)
34 3tnl_A Shikimate dehydrogenase 94.9 0.045 1.5E-06 56.7 7.3 91 341-448 138-237 (315)
35 3t4e_A Quinate/shikimate dehyd 94.8 0.054 1.8E-06 56.0 7.7 90 342-448 133-231 (312)
36 1gpj_A Glutamyl-tRNA reductase 94.7 0.21 7.2E-06 52.7 12.2 102 354-475 164-269 (404)
37 3don_A Shikimate dehydrogenase 94.7 0.036 1.2E-06 56.3 6.1 86 341-448 101-186 (277)
38 4e12_A Diketoreductase; oxidor 94.7 0.069 2.4E-06 53.2 8.0 98 358-477 5-124 (283)
39 1v8b_A Adenosylhomocysteinase; 94.6 0.17 5.7E-06 55.5 11.5 123 332-487 235-357 (479)
40 3oj0_A Glutr, glutamyl-tRNA re 94.6 0.02 6.7E-07 51.1 3.4 88 335-448 4-91 (144)
41 2egg_A AROE, shikimate 5-dehyd 94.3 0.043 1.5E-06 55.8 5.4 87 342-448 125-215 (297)
42 1v9l_A Glutamate dehydrogenase 94.2 0.3 1E-05 52.7 12.0 178 279-475 115-325 (421)
43 2tmg_A Protein (glutamate dehy 94.1 1.2 4.2E-05 47.9 16.5 178 280-475 115-319 (415)
44 1c1d_A L-phenylalanine dehydro 94.0 0.19 6.4E-06 53.1 9.8 162 282-476 93-266 (355)
45 2c2x_A Methylenetetrahydrofola 94.0 0.11 3.9E-06 53.3 7.9 98 335-474 136-234 (281)
46 2rir_A Dipicolinate synthase, 93.9 0.088 3E-06 53.0 6.9 110 348-485 148-257 (300)
47 3u62_A Shikimate dehydrogenase 93.8 0.11 3.7E-06 51.9 7.3 125 288-447 42-176 (253)
48 1pjc_A Protein (L-alanine dehy 93.8 0.14 4.8E-06 53.1 8.4 96 355-474 165-269 (361)
49 1leh_A Leucine dehydrogenase; 93.6 0.12 4.1E-06 54.5 7.5 159 285-475 93-264 (364)
50 2dpo_A L-gulonate 3-dehydrogen 93.3 0.26 8.9E-06 50.7 9.3 123 357-505 6-151 (319)
51 1bgv_A Glutamate dehydrogenase 93.3 2.3 7.9E-05 46.3 17.0 179 280-475 136-350 (449)
52 3u95_A Glycoside hydrolase, fa 93.2 0.15 5.2E-06 55.5 7.7 129 359-500 2-184 (477)
53 3d64_A Adenosylhomocysteinase; 93.2 0.22 7.6E-06 54.7 9.0 111 334-475 257-367 (494)
54 1mld_A Malate dehydrogenase; o 93.0 0.26 8.8E-06 50.5 8.6 101 359-475 2-120 (314)
55 3fbt_A Chorismate mutase and s 93.0 0.15 5.1E-06 52.0 6.8 49 342-401 107-155 (282)
56 1pzg_A LDH, lactate dehydrogen 93.0 0.18 6.1E-06 52.1 7.4 102 358-477 10-137 (331)
57 3o8q_A Shikimate 5-dehydrogena 92.9 0.15 5.3E-06 51.6 6.7 50 341-401 110-159 (281)
58 3pwz_A Shikimate dehydrogenase 92.6 0.17 5.8E-06 51.1 6.5 57 333-401 96-153 (272)
59 1hyh_A L-hicdh, L-2-hydroxyiso 92.3 0.13 4.6E-06 51.9 5.4 102 358-476 2-126 (309)
60 3tum_A Shikimate dehydrogenase 92.1 0.25 8.5E-06 50.0 7.0 49 342-401 110-158 (269)
61 2o4c_A Erythronate-4-phosphate 92.0 0.97 3.3E-05 48.0 11.7 188 325-556 81-281 (380)
62 3fef_A Putative glucosidase LP 92.0 0.22 7.4E-06 54.1 6.8 106 355-475 3-149 (450)
63 1gtm_A Glutamate dehydrogenase 91.9 1.3 4.5E-05 47.5 12.7 114 280-405 115-250 (419)
64 2eez_A Alanine dehydrogenase; 91.8 0.28 9.6E-06 51.0 7.2 96 355-474 164-268 (369)
65 1obb_A Maltase, alpha-glucosid 91.6 0.27 9.3E-06 53.8 7.2 124 357-498 3-174 (480)
66 3dtt_A NADP oxidoreductase; st 91.6 0.21 7.3E-06 48.6 5.8 109 351-475 13-127 (245)
67 3mw9_A GDH 1, glutamate dehydr 91.5 0.91 3.1E-05 50.1 11.1 179 279-475 136-352 (501)
68 3oet_A Erythronate-4-phosphate 91.2 1.1 3.6E-05 47.8 11.0 119 325-475 84-213 (381)
69 2ekl_A D-3-phosphoglycerate de 91.1 2.3 7.9E-05 43.5 13.0 121 324-473 90-233 (313)
70 3ce6_A Adenosylhomocysteinase; 90.9 1.2 4.1E-05 48.8 11.4 108 349-487 266-374 (494)
71 2ewd_A Lactate dehydrogenase,; 90.9 0.18 6E-06 51.2 4.5 100 358-476 5-125 (317)
72 1nyt_A Shikimate 5-dehydrogena 90.8 0.39 1.3E-05 47.7 6.9 49 341-401 103-151 (271)
73 2v6b_A L-LDH, L-lactate dehydr 90.6 0.071 2.4E-06 54.2 1.3 122 359-498 2-139 (304)
74 2g1u_A Hypothetical protein TM 90.5 0.44 1.5E-05 42.8 6.3 102 353-473 15-119 (155)
75 1b8p_A Protein (malate dehydro 90.5 0.15 5E-06 52.4 3.5 111 358-475 6-136 (329)
76 3hdj_A Probable ornithine cycl 90.5 1.1 3.9E-05 45.9 10.2 112 343-485 109-227 (313)
77 1p77_A Shikimate 5-dehydrogena 90.4 0.32 1.1E-05 48.4 5.8 49 341-401 103-151 (272)
78 2i6t_A Ubiquitin-conjugating e 90.4 0.41 1.4E-05 48.9 6.7 101 358-476 15-129 (303)
79 1x7d_A Ornithine cyclodeaminas 90.1 0.5 1.7E-05 49.3 7.2 114 342-483 116-238 (350)
80 2hjr_A Malate dehydrogenase; m 90.0 0.21 7.1E-06 51.5 4.1 123 358-502 15-160 (328)
81 1lu9_A Methylene tetrahydromet 89.8 1.6 5.3E-05 43.4 10.2 81 307-401 64-152 (287)
82 1zud_1 Adenylyltransferase THI 89.8 0.34 1.2E-05 47.9 5.4 37 354-401 25-61 (251)
83 2gcg_A Glyoxylate reductase/hy 89.8 2.9 9.8E-05 42.9 12.4 122 324-473 98-247 (330)
84 2dbq_A Glyoxylate reductase; D 89.7 4.4 0.00015 41.6 13.8 120 325-473 90-241 (334)
85 1o6z_A MDH, malate dehydrogena 89.6 0.2 6.9E-06 50.9 3.6 103 359-475 2-122 (303)
86 1t2d_A LDH-P, L-lactate dehydr 89.5 0.29 1E-05 50.3 4.8 102 358-477 5-131 (322)
87 1s6y_A 6-phospho-beta-glucosid 89.4 0.25 8.7E-06 53.4 4.4 127 358-498 8-175 (450)
88 2rcy_A Pyrroline carboxylate r 89.3 2 6.9E-05 41.3 10.4 92 357-476 4-95 (262)
89 2i99_A MU-crystallin homolog; 89.3 1.1 3.7E-05 45.5 8.8 114 342-482 122-237 (312)
90 1u8x_X Maltose-6'-phosphate gl 89.0 0.35 1.2E-05 52.7 5.1 126 357-498 28-194 (472)
91 2hmt_A YUAA protein; RCK, KTN, 88.9 0.26 8.9E-06 42.4 3.3 102 355-475 4-108 (144)
92 2hk9_A Shikimate dehydrogenase 88.9 0.75 2.6E-05 45.7 7.1 84 342-448 114-197 (275)
93 2zqz_A L-LDH, L-lactate dehydr 88.8 0.27 9.1E-06 50.8 3.9 105 358-475 10-128 (326)
94 1ldn_A L-lactate dehydrogenase 88.8 0.15 5.1E-06 52.1 2.0 105 358-475 7-126 (316)
95 1txg_A Glycerol-3-phosphate de 88.6 1.2 4.2E-05 44.2 8.5 94 359-475 2-107 (335)
96 1ez4_A Lactate dehydrogenase; 88.5 0.32 1.1E-05 49.9 4.3 101 358-475 6-124 (318)
97 1a5z_A L-lactate dehydrogenase 88.3 0.49 1.7E-05 48.2 5.5 102 359-477 2-121 (319)
98 4g2n_A D-isomer specific 2-hyd 88.2 3.5 0.00012 43.0 12.0 189 325-554 117-336 (345)
99 3ba1_A HPPR, hydroxyphenylpyru 88.0 2.9 9.9E-05 43.3 11.1 109 335-475 123-254 (333)
100 2d5c_A AROE, shikimate 5-dehyd 88.0 0.73 2.5E-05 45.2 6.3 81 342-448 102-182 (263)
101 2vhw_A Alanine dehydrogenase; 88.0 0.6 2.1E-05 48.8 6.0 96 354-473 165-269 (377)
102 1omo_A Alanine dehydrogenase; 87.8 1.9 6.4E-05 44.2 9.4 112 342-483 112-229 (322)
103 1y6j_A L-lactate dehydrogenase 87.8 0.47 1.6E-05 48.6 4.9 100 358-475 8-126 (318)
104 1wwk_A Phosphoglycerate dehydr 87.7 3.7 0.00013 41.8 11.6 109 335-473 102-233 (307)
105 1up7_A 6-phospho-beta-glucosid 87.7 0.77 2.6E-05 49.2 6.7 124 358-498 3-164 (417)
106 3d0o_A L-LDH 1, L-lactate dehy 87.7 0.47 1.6E-05 48.6 4.9 107 356-475 5-126 (317)
107 3k5p_A D-3-phosphoglycerate de 87.7 4.5 0.00016 43.5 12.7 194 323-555 101-323 (416)
108 2zyd_A 6-phosphogluconate dehy 87.6 1.3 4.4E-05 48.0 8.5 102 354-475 12-116 (480)
109 3vku_A L-LDH, L-lactate dehydr 87.3 0.47 1.6E-05 49.3 4.6 106 357-475 9-128 (326)
110 1nvt_A Shikimate 5'-dehydrogen 87.0 0.56 1.9E-05 46.9 4.9 49 340-401 111-159 (287)
111 1smk_A Malate dehydrogenase, g 86.8 0.8 2.7E-05 47.0 6.0 104 358-475 9-128 (326)
112 3jtm_A Formate dehydrogenase, 86.5 4.5 0.00016 42.3 11.6 174 324-528 108-309 (351)
113 3gt0_A Pyrroline-5-carboxylate 86.5 1.6 5.6E-05 42.1 7.8 123 358-506 3-126 (247)
114 3d1l_A Putative NADP oxidoredu 86.4 0.48 1.6E-05 46.1 3.9 98 354-475 7-105 (266)
115 2j6i_A Formate dehydrogenase; 86.3 3.5 0.00012 43.1 10.7 144 305-474 88-259 (364)
116 2cuk_A Glycerate dehydrogenase 86.2 6 0.00021 40.4 12.2 183 324-554 87-302 (311)
117 3gvi_A Malate dehydrogenase; N 86.2 0.79 2.7E-05 47.5 5.6 106 355-475 5-127 (324)
118 3h8v_A Ubiquitin-like modifier 86.1 0.74 2.5E-05 47.2 5.3 73 353-442 32-107 (292)
119 1z82_A Glycerol-3-phosphate de 85.9 0.72 2.5E-05 46.7 5.1 98 357-477 14-116 (335)
120 1oju_A MDH, malate dehydrogena 85.9 0.78 2.7E-05 46.8 5.3 104 359-475 2-121 (294)
121 4e21_A 6-phosphogluconate dehy 85.9 2.6 9.1E-05 43.9 9.4 95 355-474 20-117 (358)
122 1npy_A Hypothetical shikimate 85.8 1 3.5E-05 45.3 6.1 48 342-401 105-152 (271)
123 1xdw_A NAD+-dependent (R)-2-hy 85.7 5.9 0.0002 40.7 11.8 119 324-473 91-235 (331)
124 4huj_A Uncharacterized protein 85.7 0.93 3.2E-05 43.3 5.5 93 358-476 24-117 (220)
125 1hdo_A Biliverdin IX beta redu 85.6 2 7E-05 38.7 7.5 98 357-472 3-111 (206)
126 4dgs_A Dehydrogenase; structur 85.6 5.5 0.00019 41.5 11.6 177 335-554 129-331 (340)
127 3ado_A Lambda-crystallin; L-gu 85.6 1 3.4E-05 46.8 6.0 33 357-401 6-38 (319)
128 3rui_A Ubiquitin-like modifier 85.5 0.57 1.9E-05 49.2 4.1 37 354-401 31-67 (340)
129 1ur5_A Malate dehydrogenase; o 85.3 0.98 3.4E-05 45.9 5.7 100 358-475 3-122 (309)
130 3kkj_A Amine oxidase, flavin-c 85.3 0.78 2.7E-05 40.6 4.4 31 359-401 4-34 (336)
131 2d0i_A Dehydrogenase; structur 85.1 5.6 0.00019 41.0 11.3 91 353-473 142-236 (333)
132 1guz_A Malate dehydrogenase; o 85.1 0.73 2.5E-05 46.7 4.7 100 359-475 2-121 (310)
133 1lld_A L-lactate dehydrogenase 85.1 0.44 1.5E-05 47.6 3.0 104 358-476 8-128 (319)
134 1f0y_A HCDH, L-3-hydroxyacyl-C 84.9 1.1 3.6E-05 44.8 5.7 32 358-401 16-47 (302)
135 3i83_A 2-dehydropantoate 2-red 84.9 0.96 3.3E-05 45.6 5.4 98 358-476 3-109 (320)
136 2p4q_A 6-phosphogluconate dehy 84.8 1.7 5.9E-05 47.3 7.7 98 358-475 11-112 (497)
137 4hy3_A Phosphoglycerate oxidor 84.8 3.7 0.00013 43.3 10.0 178 335-554 133-339 (365)
138 3p7m_A Malate dehydrogenase; p 84.6 0.49 1.7E-05 48.8 3.2 103 355-475 3-125 (321)
139 2xxj_A L-LDH, L-lactate dehydr 84.5 0.35 1.2E-05 49.5 2.0 99 359-475 2-119 (310)
140 4gsl_A Ubiquitin-like modifier 84.2 0.98 3.3E-05 51.0 5.5 37 354-401 323-359 (615)
141 3nep_X Malate dehydrogenase; h 84.1 0.55 1.9E-05 48.4 3.3 104 359-475 2-121 (314)
142 3tl2_A Malate dehydrogenase; c 84.1 0.64 2.2E-05 47.9 3.7 107 355-475 6-130 (315)
143 3lk7_A UDP-N-acetylmuramoylala 83.9 1.1 3.9E-05 47.6 5.7 121 354-512 6-126 (451)
144 4ina_A Saccharopine dehydrogen 83.8 1.4 4.8E-05 46.4 6.3 96 358-473 2-108 (405)
145 2d4a_B Malate dehydrogenase; a 83.8 0.82 2.8E-05 46.7 4.3 98 359-475 1-119 (308)
146 1jw9_B Molybdopterin biosynthe 83.6 0.84 2.9E-05 45.0 4.2 37 354-401 28-64 (249)
147 3k96_A Glycerol-3-phosphate de 83.3 4.1 0.00014 42.4 9.5 102 357-476 29-137 (356)
148 2iz1_A 6-phosphogluconate dehy 83.3 2 6.9E-05 46.2 7.4 99 357-475 5-106 (474)
149 3ic5_A Putative saccharopine d 83.2 0.62 2.1E-05 38.6 2.6 88 357-463 5-93 (118)
150 2raf_A Putative dinucleotide-b 83.1 2.5 8.5E-05 40.2 7.2 79 354-476 16-94 (209)
151 1ks9_A KPA reductase;, 2-dehyd 82.7 2.1 7.2E-05 41.4 6.6 95 359-475 2-100 (291)
152 3hg7_A D-isomer specific 2-hyd 82.6 3.3 0.00011 42.9 8.3 177 336-556 103-304 (324)
153 3vh1_A Ubiquitin-like modifier 82.5 1.2 4E-05 50.2 5.3 38 353-401 323-360 (598)
154 1x0v_A GPD-C, GPDH-C, glycerol 82.4 2.8 9.6E-05 42.2 7.6 111 357-476 8-128 (354)
155 1y7t_A Malate dehydrogenase; N 82.3 0.85 2.9E-05 46.2 3.8 110 358-475 5-133 (327)
156 2yq5_A D-isomer specific 2-hyd 82.2 14 0.00049 38.4 13.1 194 325-556 93-325 (343)
157 3abi_A Putative uncharacterize 82.1 0.87 3E-05 46.9 3.8 88 359-473 18-109 (365)
158 3gvx_A Glycerate dehydrogenase 81.7 10 0.00035 38.6 11.5 177 335-555 84-282 (290)
159 3evt_A Phosphoglycerate dehydr 81.6 4.2 0.00014 42.0 8.7 189 324-554 83-301 (324)
160 3pqe_A L-LDH, L-lactate dehydr 81.6 0.65 2.2E-05 48.1 2.6 102 357-475 5-125 (326)
161 1qp8_A Formate dehydrogenase; 81.5 10 0.00035 38.6 11.4 117 324-473 71-211 (303)
162 4fgw_A Glycerol-3-phosphate de 81.4 1.7 6E-05 46.3 5.9 96 358-462 35-140 (391)
163 2w2k_A D-mandelate dehydrogena 81.4 12 0.0004 38.8 12.0 167 352-554 158-329 (348)
164 1pgj_A 6PGDH, 6-PGDH, 6-phosph 81.4 2 6.8E-05 46.4 6.4 97 359-475 3-106 (478)
165 2pi1_A D-lactate dehydrogenase 81.3 11 0.00037 39.0 11.7 129 335-495 100-251 (334)
166 4egb_A DTDP-glucose 4,6-dehydr 81.3 4 0.00014 40.4 8.2 106 355-472 22-149 (346)
167 1hye_A L-lactate/malate dehydr 81.3 1.7 5.8E-05 44.2 5.6 103 359-475 2-125 (313)
168 3k6j_A Protein F01G10.3, confi 81.0 1.6 5.5E-05 47.5 5.5 105 431-547 151-267 (460)
169 1dxy_A D-2-hydroxyisocaproate 80.9 14 0.00049 37.9 12.4 121 324-475 90-236 (333)
170 3h5n_A MCCB protein; ubiquitin 80.6 1.4 4.6E-05 46.0 4.6 38 353-401 114-151 (353)
171 3phh_A Shikimate dehydrogenase 80.5 1.5 5E-05 44.5 4.7 100 342-474 107-212 (269)
172 1sc6_A PGDH, D-3-phosphoglycer 80.5 17 0.00058 38.6 13.1 191 324-554 91-311 (404)
173 2vns_A Metalloreductase steap3 80.1 1.4 4.7E-05 42.1 4.2 96 353-476 24-119 (215)
174 2nac_A NAD-dependent formate d 80.1 7.1 0.00024 41.5 10.0 183 335-554 149-357 (393)
175 1jay_A Coenzyme F420H2:NADP+ o 79.7 0.98 3.3E-05 42.1 2.9 94 359-476 2-101 (212)
176 3pp8_A Glyoxylate/hydroxypyruv 79.4 4.8 0.00016 41.4 8.2 192 324-555 86-302 (315)
177 1y8q_A Ubiquitin-like 1 activa 79.1 1.6 5.6E-05 45.3 4.7 37 354-401 33-69 (346)
178 3b1f_A Putative prephenate deh 79.0 2.7 9.3E-05 41.2 6.0 96 357-474 6-103 (290)
179 4dll_A 2-hydroxy-3-oxopropiona 79.0 1.9 6.5E-05 43.6 5.0 34 356-401 30-63 (320)
180 3gg9_A D-3-phosphoglycerate de 78.8 9.3 0.00032 39.9 10.3 189 325-554 98-325 (352)
181 1yj8_A Glycerol-3-phosphate de 78.7 2.5 8.6E-05 43.5 5.9 110 358-476 22-145 (375)
182 2uyy_A N-PAC protein; long-cha 78.7 3.1 0.00011 41.4 6.4 32 358-401 31-62 (316)
183 3vrd_B FCCB subunit, flavocyto 78.6 1.6 5.6E-05 44.4 4.4 35 357-401 2-36 (401)
184 1gdh_A D-glycerate dehydrogena 78.5 12 0.00042 38.1 11.0 121 325-473 90-239 (320)
185 2h78_A Hibadh, 3-hydroxyisobut 78.3 2.5 8.7E-05 41.8 5.6 32 358-401 4-35 (302)
186 4gwg_A 6-phosphogluconate dehy 78.0 4.9 0.00017 43.8 8.2 98 358-475 5-106 (484)
187 3l6d_A Putative oxidoreductase 77.8 2.1 7.3E-05 43.0 5.0 36 354-401 6-41 (306)
188 3c85_A Putative glutathione-re 77.8 1.3 4.5E-05 40.4 3.2 37 354-401 36-72 (183)
189 2z2v_A Hypothetical protein PH 77.6 1.5 5.2E-05 45.7 3.9 120 356-504 15-137 (365)
190 2izz_A Pyrroline-5-carboxylate 77.6 4.7 0.00016 40.7 7.5 99 357-476 22-122 (322)
191 2g76_A 3-PGDH, D-3-phosphoglyc 77.6 10 0.00034 39.3 10.1 119 325-473 112-256 (335)
192 1lss_A TRK system potassium up 77.6 2.4 8.2E-05 36.1 4.6 33 357-401 4-36 (140)
193 1hyu_A AHPF, alkyl hydroperoxi 77.5 1.8 6.1E-05 46.8 4.6 100 287-401 134-244 (521)
194 3e8x_A Putative NAD-dependent 77.5 3.4 0.00012 38.8 6.0 100 353-472 17-131 (236)
195 3o38_A Short chain dehydrogena 77.5 3.3 0.00011 39.8 6.1 76 354-448 19-112 (266)
196 2qrj_A Saccharopine dehydrogen 77.5 5.5 0.00019 42.6 8.2 71 357-459 214-289 (394)
197 3i6i_A Putative leucoanthocyan 77.4 1.3 4.4E-05 44.3 3.2 101 354-469 7-117 (346)
198 3pef_A 6-phosphogluconate dehy 77.4 2.9 0.0001 41.2 5.7 32 358-401 2-33 (287)
199 1j4a_A D-LDH, D-lactate dehydr 77.3 20 0.0007 36.7 12.2 122 324-475 92-238 (333)
200 3r6d_A NAD-dependent epimerase 77.2 2.1 7.3E-05 39.8 4.5 94 358-470 6-106 (221)
201 2pgd_A 6-phosphogluconate dehy 76.8 4.9 0.00017 43.3 7.7 98 358-475 3-104 (482)
202 2q1w_A Putative nucleotide sug 76.8 7.7 0.00026 38.4 8.6 104 354-472 18-137 (333)
203 3gpi_A NAD-dependent epimerase 76.3 1.6 5.6E-05 42.2 3.5 97 356-472 2-109 (286)
204 3doj_A AT3G25530, dehydrogenas 76.2 5.4 0.00019 40.0 7.4 36 354-401 18-53 (310)
205 3pdu_A 3-hydroxyisobutyrate de 76.1 3.8 0.00013 40.3 6.2 32 358-401 2-33 (287)
206 3qsg_A NAD-binding phosphogluc 75.9 14 0.00046 37.2 10.3 33 358-401 25-57 (312)
207 3cky_A 2-hydroxymethyl glutara 75.9 2.8 9.4E-05 41.2 5.1 32 358-401 5-36 (301)
208 3c24_A Putative oxidoreductase 75.7 3.9 0.00013 40.3 6.1 91 358-475 12-104 (286)
209 1yb4_A Tartronic semialdehyde 75.4 4.6 0.00016 39.4 6.5 30 358-399 4-33 (295)
210 1mx3_A CTBP1, C-terminal bindi 75.3 16 0.00054 38.0 10.8 209 305-554 89-334 (347)
211 4e5n_A Thermostable phosphite 74.8 8.6 0.00029 39.6 8.6 195 325-555 90-318 (330)
212 2pzm_A Putative nucleotide sug 74.8 6.1 0.00021 39.1 7.3 103 353-472 16-136 (330)
213 3fwz_A Inner membrane protein 74.6 1.5 5.1E-05 38.7 2.5 32 358-401 8-39 (140)
214 3dhn_A NAD-dependent epimerase 74.2 4 0.00014 37.8 5.5 97 358-472 5-112 (227)
215 2x0j_A Malate dehydrogenase; o 73.8 3.3 0.00011 42.4 5.1 104 359-475 2-121 (294)
216 4aj2_A L-lactate dehydrogenase 73.5 1.3 4.5E-05 46.0 2.1 118 354-488 16-149 (331)
217 3ip1_A Alcohol dehydrogenase, 73.3 17 0.00059 37.6 10.6 93 344-459 200-304 (404)
218 2ph5_A Homospermidine synthase 73.2 7.8 0.00027 42.5 8.2 98 357-473 13-115 (480)
219 3fi9_A Malate dehydrogenase; s 73.1 2 6.9E-05 44.8 3.4 107 355-475 6-129 (343)
220 2x5o_A UDP-N-acetylmuramoylala 72.9 14 0.00048 39.0 9.9 115 354-510 2-116 (439)
221 1tt5_B Ubiquitin-activating en 72.8 2.2 7.5E-05 46.0 3.7 37 354-401 37-73 (434)
222 1vpd_A Tartronate semialdehyde 72.0 3.3 0.00011 40.6 4.5 32 358-401 6-37 (299)
223 3qha_A Putative oxidoreductase 71.7 6.3 0.00022 39.2 6.6 32 358-401 16-47 (296)
224 4ezb_A Uncharacterized conserv 71.7 3.9 0.00013 41.5 5.1 33 358-401 25-57 (317)
225 2z1m_A GDP-D-mannose dehydrata 71.3 7 0.00024 38.2 6.7 103 356-472 2-127 (345)
226 4id9_A Short-chain dehydrogena 71.3 8.7 0.0003 37.9 7.4 97 353-472 15-126 (347)
227 3ldh_A Lactate dehydrogenase; 70.9 1.5 5.1E-05 45.7 1.9 116 357-489 21-152 (330)
228 3vtz_A Glucose 1-dehydrogenase 70.6 9 0.00031 37.4 7.3 79 352-448 9-92 (269)
229 3d1c_A Flavin-containing putat 70.6 3.7 0.00013 40.7 4.5 36 356-402 3-38 (369)
230 1bg6_A N-(1-D-carboxylethyl)-L 70.3 4.5 0.00015 40.5 5.2 93 358-473 5-110 (359)
231 3m2p_A UDP-N-acetylglucosamine 69.9 11 0.00039 36.6 7.8 93 358-472 3-109 (311)
232 4hb9_A Similarities with proba 69.7 4.1 0.00014 40.6 4.7 32 358-401 2-33 (412)
233 1y8q_B Anthracycline-, ubiquit 69.4 3.2 0.00011 47.1 4.2 37 354-401 14-50 (640)
234 3llv_A Exopolyphosphatase-rela 69.4 2.7 9.2E-05 36.6 2.9 34 356-401 5-38 (141)
235 4b8w_A GDP-L-fucose synthase; 68.8 7.3 0.00025 37.2 6.1 93 354-472 3-113 (319)
236 3slg_A PBGP3 protein; structur 68.8 19 0.00064 36.0 9.3 101 354-472 21-141 (372)
237 1i36_A Conserved hypothetical 68.7 10 0.00034 36.5 7.1 30 359-400 2-31 (264)
238 1uzm_A 3-oxoacyl-[acyl-carrier 68.5 13 0.00044 35.6 7.7 78 352-448 10-92 (247)
239 3s2u_A UDP-N-acetylglucosamine 68.4 6.6 0.00023 40.1 6.0 41 429-473 84-124 (365)
240 5mdh_A Malate dehydrogenase; o 68.2 1.7 5.9E-05 45.1 1.6 120 358-488 4-142 (333)
241 1n2s_A DTDP-4-, DTDP-glucose o 67.8 5.8 0.0002 38.2 5.2 86 359-472 2-104 (299)
242 4a9w_A Monooxygenase; baeyer-v 67.6 4 0.00014 39.7 4.0 34 357-402 3-36 (357)
243 2pv7_A T-protein [includes: ch 67.3 15 0.00051 36.6 8.2 32 358-401 22-54 (298)
244 4b4u_A Bifunctional protein fo 67.0 17 0.00059 37.7 8.7 85 335-457 157-242 (303)
245 3nrc_A Enoyl-[acyl-carrier-pro 66.9 9.3 0.00032 37.2 6.5 79 354-449 23-115 (280)
246 3kb6_A D-lactate dehydrogenase 66.8 32 0.0011 35.5 10.8 111 352-496 136-252 (334)
247 3uko_A Alcohol dehydrogenase c 66.8 10 0.00034 38.9 7.0 79 346-447 183-273 (378)
248 3hyw_A Sulfide-quinone reducta 66.7 4.4 0.00015 42.3 4.3 34 358-401 3-36 (430)
249 3hhp_A Malate dehydrogenase; M 66.6 6.1 0.00021 40.6 5.3 103 359-475 2-121 (312)
250 3ehe_A UDP-glucose 4-epimerase 66.0 18 0.0006 35.2 8.3 95 359-472 3-114 (313)
251 3fbs_A Oxidoreductase; structu 65.8 5.5 0.00019 37.9 4.5 32 358-401 3-34 (297)
252 2ahr_A Putative pyrroline carb 65.7 5.8 0.0002 38.2 4.7 90 358-475 4-93 (259)
253 2c20_A UDP-glucose 4-epimerase 65.6 12 0.00042 36.5 7.1 99 358-472 2-118 (330)
254 1e6u_A GDP-fucose synthetase; 65.5 7.8 0.00027 37.7 5.6 87 357-472 3-107 (321)
255 3e48_A Putative nucleoside-dip 65.2 8.5 0.00029 37.0 5.8 97 359-472 2-106 (289)
256 2bka_A CC3, TAT-interacting pr 64.6 11 0.00036 35.2 6.2 102 355-472 16-132 (242)
257 3alj_A 2-methyl-3-hydroxypyrid 64.2 6.3 0.00022 39.8 4.8 38 354-403 8-45 (379)
258 3f8d_A Thioredoxin reductase ( 64.2 6.1 0.00021 37.9 4.5 33 357-401 15-47 (323)
259 3ew7_A LMO0794 protein; Q8Y8U8 64.2 14 0.00047 33.7 6.7 91 359-472 2-103 (221)
260 3fg2_P Putative rubredoxin red 63.6 6.2 0.00021 40.6 4.7 37 358-404 2-38 (404)
261 2zbw_A Thioredoxin reductase; 63.5 6.3 0.00021 38.6 4.5 34 357-402 5-38 (335)
262 3ek2_A Enoyl-(acyl-carrier-pro 63.3 8 0.00027 36.9 5.1 81 352-448 9-103 (271)
263 3klj_A NAD(FAD)-dependent dehy 63.3 6.8 0.00023 40.6 5.0 36 357-404 9-44 (385)
264 3lzw_A Ferredoxin--NADP reduct 63.2 6.5 0.00022 38.0 4.5 34 357-402 7-40 (332)
265 3oz2_A Digeranylgeranylglycero 63.1 6.1 0.00021 39.0 4.4 31 359-401 6-36 (397)
266 2yjz_A Metalloreductase steap4 66.9 1.5 5.2E-05 41.7 0.0 92 355-475 17-108 (201)
267 2jae_A L-amino acid oxidase; o 62.3 7.1 0.00024 40.8 5.0 42 350-403 4-45 (489)
268 3tzq_B Short-chain type dehydr 62.3 8.7 0.0003 37.3 5.3 78 353-448 7-96 (271)
269 3h8l_A NADH oxidase; membrane 62.2 8.8 0.0003 39.2 5.5 36 358-402 2-37 (409)
270 1ygy_A PGDH, D-3-phosphoglycer 62.0 31 0.0011 37.6 10.1 120 324-472 88-232 (529)
271 3qvo_A NMRA family protein; st 61.8 10 0.00035 35.7 5.5 101 355-472 21-125 (236)
272 2dq4_A L-threonine 3-dehydroge 61.7 10 0.00036 38.1 5.9 106 334-460 143-253 (343)
273 3i1j_A Oxidoreductase, short c 61.6 20 0.0007 33.6 7.6 38 353-401 10-47 (247)
274 3lxd_A FAD-dependent pyridine 61.5 6.9 0.00024 40.3 4.6 38 356-403 8-45 (415)
275 2x4g_A Nucleoside-diphosphate- 61.5 16 0.00056 35.7 7.1 96 359-472 15-126 (342)
276 1hxh_A 3BETA/17BETA-hydroxyste 61.5 6 0.00021 37.9 3.9 77 354-448 3-91 (253)
277 4a7p_A UDP-glucose dehydrogena 61.4 25 0.00086 37.8 9.1 45 438-482 122-166 (446)
278 2p5y_A UDP-glucose 4-epimerase 61.3 14 0.00048 35.9 6.5 98 359-472 2-117 (311)
279 3pdi_B Nitrogenase MOFE cofact 61.2 2.8 9.6E-05 45.2 1.6 75 353-446 309-384 (458)
280 2ywl_A Thioredoxin reductase r 61.2 8.2 0.00028 34.6 4.5 32 358-401 2-33 (180)
281 1pqw_A Polyketide synthase; ro 61.1 22 0.00074 32.5 7.5 50 340-401 22-72 (198)
282 2q7v_A Thioredoxin reductase; 61.1 6.5 0.00022 38.5 4.1 33 357-401 8-40 (325)
283 3l4b_C TRKA K+ channel protien 60.8 6.1 0.00021 37.2 3.7 95 359-473 2-100 (218)
284 3dme_A Conserved exported prot 60.5 8.1 0.00028 37.8 4.7 33 357-401 4-36 (369)
285 2d8a_A PH0655, probable L-thre 60.4 9.9 0.00034 38.3 5.5 49 340-401 153-201 (348)
286 2c5a_A GDP-mannose-3', 5'-epim 60.4 27 0.00093 35.2 8.8 99 356-472 28-145 (379)
287 3itj_A Thioredoxin reductase 1 60.3 6 0.00021 38.3 3.7 33 357-401 22-54 (338)
288 1hdc_A 3-alpha, 20 beta-hydrox 60.3 9.3 0.00032 36.7 5.0 37 354-401 2-38 (254)
289 2dkn_A 3-alpha-hydroxysteroid 60.2 12 0.00039 35.0 5.5 69 359-449 3-74 (255)
290 3pid_A UDP-glucose 6-dehydroge 60.2 8.8 0.0003 41.4 5.3 44 438-487 146-189 (432)
291 2yy7_A L-threonine dehydrogena 60.0 9.8 0.00033 36.8 5.1 99 358-472 3-118 (312)
292 3gg2_A Sugar dehydrogenase, UD 60.0 8.6 0.00029 41.2 5.2 32 358-401 3-34 (450)
293 1ryi_A Glycine oxidase; flavop 59.8 8.1 0.00028 38.5 4.7 35 357-403 17-51 (382)
294 3p19_A BFPVVD8, putative blue 59.8 9.7 0.00033 37.1 5.1 82 352-448 11-98 (266)
295 1id1_A Putative potassium chan 59.6 9.6 0.00033 33.7 4.7 34 356-401 2-35 (153)
296 2vou_A 2,6-dihydroxypyridine h 59.4 9.8 0.00033 38.7 5.2 35 356-402 4-38 (397)
297 3axb_A Putative oxidoreductase 59.4 9 0.00031 39.5 5.0 38 352-400 18-55 (448)
298 3nix_A Flavoprotein/dehydrogen 59.3 11 0.00038 38.1 5.6 35 357-403 5-39 (421)
299 3c96_A Flavin-containing monoo 59.3 9 0.00031 39.2 5.0 35 357-402 4-38 (410)
300 1tt5_A APPBP1, amyloid protein 59.3 4.9 0.00017 44.3 3.2 37 354-401 29-65 (531)
301 2cvz_A Dehydrogenase, 3-hydrox 59.3 6.2 0.00021 38.3 3.6 30 359-401 3-32 (289)
302 1y56_B Sarcosine oxidase; dehy 59.2 8.6 0.00029 38.4 4.7 34 357-402 5-38 (382)
303 2xdo_A TETX2 protein; tetracyc 59.1 8.3 0.00028 39.3 4.7 36 355-402 24-59 (398)
304 3cty_A Thioredoxin reductase; 59.0 8.1 0.00028 37.6 4.4 33 357-401 16-48 (319)
305 2d1y_A Hypothetical protein TT 58.9 17 0.00058 34.8 6.6 79 354-448 3-88 (256)
306 2dtx_A Glucose 1-dehydrogenase 58.6 40 0.0014 32.5 9.3 76 354-448 5-85 (264)
307 1zk4_A R-specific alcohol dehy 58.6 7.3 0.00025 36.7 3.9 37 354-401 3-39 (251)
308 3enk_A UDP-glucose 4-epimerase 58.5 12 0.00039 36.8 5.4 97 357-472 5-129 (341)
309 2q2v_A Beta-D-hydroxybutyrate 58.4 9.7 0.00033 36.4 4.8 37 354-401 1-37 (255)
310 2gf3_A MSOX, monomeric sarcosi 58.4 8.6 0.00029 38.3 4.5 35 358-404 4-38 (389)
311 1o5i_A 3-oxoacyl-(acyl carrier 58.4 33 0.0011 32.7 8.6 77 353-448 15-92 (249)
312 3ef6_A Toluene 1,2-dioxygenase 58.3 9.2 0.00032 39.5 4.9 37 358-404 3-39 (410)
313 2q1s_A Putative nucleotide sug 58.2 14 0.00047 37.4 6.1 103 354-472 29-151 (377)
314 3sxp_A ADP-L-glycero-D-mannohe 58.1 19 0.00066 35.9 7.1 108 353-472 6-138 (362)
315 2q0l_A TRXR, thioredoxin reduc 58.0 9 0.00031 37.0 4.5 33 358-401 2-34 (311)
316 3ab1_A Ferredoxin--NADP reduct 58.0 9.3 0.00032 38.0 4.7 35 356-402 13-47 (360)
317 3tpc_A Short chain alcohol deh 57.9 24 0.00082 33.7 7.5 77 354-448 4-92 (257)
318 3rp8_A Flavoprotein monooxygen 57.7 9.6 0.00033 38.8 4.8 36 355-402 21-56 (407)
319 3ec7_A Putative dehydrogenase; 57.6 5.8 0.0002 40.6 3.2 97 354-469 20-116 (357)
320 3cgv_A Geranylgeranyl reductas 57.5 7.4 0.00025 38.9 3.9 35 357-403 4-38 (397)
321 2nu8_A Succinyl-COA ligase [AD 57.3 22 0.00074 35.8 7.3 86 357-468 7-93 (288)
322 1xq6_A Unknown protein; struct 57.1 13 0.00045 34.4 5.3 101 355-472 2-133 (253)
323 3e03_A Short chain dehydrogena 56.9 36 0.0012 33.0 8.6 37 354-401 3-39 (274)
324 2o7s_A DHQ-SDH PR, bifunctiona 56.8 12 0.00042 40.6 5.8 36 354-401 361-396 (523)
325 2vdc_G Glutamate synthase [NAD 56.8 10 0.00036 40.3 5.1 35 356-402 121-155 (456)
326 3k7m_X 6-hydroxy-L-nicotine ox 56.7 9.9 0.00034 38.7 4.8 32 359-402 3-34 (431)
327 3sc6_A DTDP-4-dehydrorhamnose 56.7 7 0.00024 37.5 3.5 83 359-472 7-106 (287)
328 1sb8_A WBPP; epimerase, 4-epim 56.7 13 0.00044 36.9 5.5 101 355-472 25-153 (352)
329 4eqs_A Coenzyme A disulfide re 56.4 9.2 0.00032 40.1 4.6 35 359-403 2-36 (437)
330 1vl0_A DTDP-4-dehydrorhamnose 56.4 10 0.00036 36.3 4.6 87 355-472 10-113 (292)
331 1zk7_A HGII, reductase, mercur 56.3 10 0.00035 39.7 4.9 33 357-401 4-36 (467)
332 3ruf_A WBGU; rossmann fold, UD 56.2 8.1 0.00028 38.2 3.9 101 355-472 23-151 (351)
333 2x3n_A Probable FAD-dependent 56.2 9.3 0.00032 38.7 4.4 35 357-403 6-40 (399)
334 3iwa_A FAD-dependent pyridine 56.2 8.1 0.00028 40.5 4.1 38 357-404 3-40 (472)
335 3n74_A 3-ketoacyl-(acyl-carrie 56.1 9.4 0.00032 36.4 4.2 78 353-448 5-94 (261)
336 3sx6_A Sulfide-quinone reducta 56.1 11 0.00039 39.1 5.2 36 358-402 5-40 (437)
337 2wm3_A NMRA-like family domain 55.8 5.7 0.00019 38.6 2.7 99 357-473 5-115 (299)
338 2gag_B Heterotetrameric sarcos 55.8 12 0.0004 37.6 5.0 36 357-402 21-56 (405)
339 3gaf_A 7-alpha-hydroxysteroid 55.7 23 0.00078 34.0 6.9 78 353-448 8-100 (256)
340 2uzz_A N-methyl-L-tryptophan o 55.7 9.4 0.00032 37.9 4.3 35 358-404 3-37 (372)
341 2nvu_B Maltose binding protein 55.6 5.9 0.0002 45.1 3.1 35 356-401 410-444 (805)
342 3dfz_A SIRC, precorrin-2 dehyd 55.6 9.2 0.00032 37.6 4.1 36 354-401 28-63 (223)
343 1mv8_A GMD, GDP-mannose 6-dehy 55.6 10 0.00036 40.0 4.9 31 359-401 2-32 (436)
344 2gqw_A Ferredoxin reductase; f 55.4 13 0.00043 38.5 5.3 38 357-404 7-44 (408)
345 1c0p_A D-amino acid oxidase; a 55.4 12 0.00042 37.2 5.1 34 357-402 6-39 (363)
346 3cmm_A Ubiquitin-activating en 55.2 10 0.00035 45.1 5.2 37 354-401 24-60 (1015)
347 3dqp_A Oxidoreductase YLBE; al 55.0 17 0.00059 33.5 5.7 94 359-472 2-106 (219)
348 4gqa_A NAD binding oxidoreduct 55.0 8.5 0.00029 39.9 4.0 112 345-467 13-129 (412)
349 2zcu_A Uncharacterized oxidore 55.0 8.3 0.00029 36.7 3.6 98 359-472 1-104 (286)
350 3r1i_A Short-chain type dehydr 54.9 34 0.0012 33.4 8.1 78 353-448 28-120 (276)
351 4ej6_A Putative zinc-binding d 54.7 28 0.00096 35.6 7.8 104 332-460 159-275 (370)
352 1yvv_A Amine oxidase, flavin-c 54.7 11 0.00037 36.8 4.5 33 358-402 3-35 (336)
353 3dje_A Fructosyl amine: oxygen 54.7 11 0.00037 38.7 4.7 37 357-404 6-42 (438)
354 2gv8_A Monooxygenase; FMO, FAD 54.7 11 0.00037 39.3 4.7 36 356-401 5-40 (447)
355 3i3l_A Alkylhalidase CMLS; fla 54.7 16 0.00054 40.4 6.3 38 355-404 21-58 (591)
356 3k31_A Enoyl-(acyl-carrier-pro 54.4 18 0.00061 35.7 6.0 81 352-448 25-119 (296)
357 2oln_A NIKD protein; flavoprot 54.2 12 0.00039 37.9 4.7 35 358-404 5-39 (397)
358 3urh_A Dihydrolipoyl dehydroge 54.1 11 0.00037 39.9 4.6 34 357-402 25-58 (491)
359 2eq6_A Pyruvate dehydrogenase 53.9 9.6 0.00033 40.1 4.2 35 356-402 5-39 (464)
360 3f1l_A Uncharacterized oxidore 53.8 29 0.001 33.1 7.3 38 353-401 8-45 (252)
361 3uox_A Otemo; baeyer-villiger 53.7 13 0.00044 40.6 5.3 36 355-402 7-42 (545)
362 1k0i_A P-hydroxybenzoate hydro 53.5 13 0.00044 37.5 4.9 33 358-402 3-35 (394)
363 3un1_A Probable oxidoreductase 53.5 36 0.0012 32.8 8.0 76 355-448 26-107 (260)
364 1dlj_A UDP-glucose dehydrogena 53.3 8.2 0.00028 40.5 3.6 30 359-401 2-31 (402)
365 3rwb_A TPLDH, pyridoxal 4-dehy 53.3 14 0.00047 35.4 4.8 38 353-401 2-39 (247)
366 1vdc_A NTR, NADPH dependent th 53.2 9.6 0.00033 37.2 3.8 33 356-400 7-39 (333)
367 2cul_A Glucose-inhibited divis 53.1 12 0.00042 35.4 4.5 33 357-401 3-35 (232)
368 3m6i_A L-arabinitol 4-dehydrog 52.9 18 0.00062 36.6 5.9 59 331-401 155-213 (363)
369 2r9z_A Glutathione amide reduc 52.8 12 0.0004 39.5 4.7 33 357-401 4-36 (463)
370 3uog_A Alcohol dehydrogenase; 52.8 16 0.00056 37.1 5.6 44 345-400 178-221 (363)
371 2xve_A Flavin-containing monoo 52.8 12 0.00039 39.7 4.6 38 358-401 3-40 (464)
372 1nff_A Putative oxidoreductase 52.8 18 0.00061 34.9 5.6 78 353-448 3-92 (260)
373 1rkx_A CDP-glucose-4,6-dehydra 52.7 20 0.0007 35.5 6.2 102 355-472 7-132 (357)
374 1dxl_A Dihydrolipoamide dehydr 52.6 14 0.00046 38.7 5.1 34 357-402 6-39 (470)
375 1yb1_A 17-beta-hydroxysteroid 52.4 37 0.0013 32.7 7.9 38 353-401 27-64 (272)
376 2fwm_X 2,3-dihydro-2,3-dihydro 52.4 44 0.0015 31.7 8.3 77 354-448 4-85 (250)
377 2ydy_A Methionine adenosyltran 52.4 25 0.00086 34.0 6.7 92 357-472 2-110 (315)
378 3sx2_A Putative 3-ketoacyl-(ac 52.3 31 0.001 33.3 7.2 40 352-402 8-47 (278)
379 3op4_A 3-oxoacyl-[acyl-carrier 52.1 10 0.00034 36.4 3.7 77 354-448 6-94 (248)
380 3grf_A Ornithine carbamoyltran 52.0 46 0.0016 34.6 8.9 131 295-443 96-240 (328)
381 3kd9_A Coenzyme A disulfide re 51.9 12 0.00041 39.0 4.6 36 357-402 3-38 (449)
382 1xg5_A ARPG836; short chain de 51.9 29 0.001 33.4 7.0 36 355-401 30-65 (279)
383 3ak4_A NADH-dependent quinucli 51.8 16 0.00054 35.0 5.1 77 354-448 9-97 (263)
384 2x8r_A Glycosyl hydrolase; pep 51.8 23 0.00077 33.9 6.1 64 235-307 73-138 (210)
385 3h7a_A Short chain dehydrogena 51.7 33 0.0011 32.9 7.3 77 354-448 4-94 (252)
386 2wpf_A Trypanothione reductase 51.7 15 0.00053 39.1 5.4 32 357-399 7-38 (495)
387 3mz0_A Inositol 2-dehydrogenas 51.6 7.9 0.00027 39.1 3.0 93 358-469 3-95 (344)
388 4a2c_A Galactitol-1-phosphate 51.5 41 0.0014 33.5 8.2 55 334-400 139-193 (346)
389 4hkt_A Inositol 2-dehydrogenas 51.3 12 0.00042 37.4 4.3 89 358-469 4-92 (331)
390 3fys_A Protein DEGV; fatty aci 51.2 9.9 0.00034 39.2 3.7 152 183-391 16-178 (315)
391 3nrn_A Uncharacterized protein 51.2 15 0.0005 37.6 5.0 33 359-403 2-34 (421)
392 2hqm_A GR, grase, glutathione 51.2 12 0.0004 39.6 4.4 35 356-402 10-44 (479)
393 4ap3_A Steroid monooxygenase; 51.1 12 0.00041 40.8 4.6 35 356-402 20-54 (549)
394 3ka7_A Oxidoreductase; structu 51.1 14 0.00049 37.4 4.9 32 359-402 2-33 (425)
395 4egf_A L-xylulose reductase; s 51.0 28 0.00094 33.6 6.7 77 354-448 17-109 (266)
396 3r9u_A Thioredoxin reductase; 51.0 11 0.00037 36.1 3.7 33 357-401 4-37 (315)
397 1pl8_A Human sorbitol dehydrog 50.9 23 0.00079 35.8 6.4 50 340-401 156-205 (356)
398 3st7_A Capsular polysaccharide 50.6 39 0.0013 33.8 7.9 79 359-472 2-94 (369)
399 1ek6_A UDP-galactose 4-epimera 50.6 12 0.00041 36.8 4.1 101 358-472 3-132 (348)
400 2qae_A Lipoamide, dihydrolipoy 50.6 14 0.00046 38.8 4.7 34 357-402 2-35 (468)
401 3h28_A Sulfide-quinone reducta 50.5 14 0.00047 38.3 4.7 35 358-402 3-37 (430)
402 2nm0_A Probable 3-oxacyl-(acyl 50.5 35 0.0012 32.9 7.3 77 353-448 17-98 (253)
403 2zb4_A Prostaglandin reductase 50.5 30 0.001 34.8 7.1 56 335-401 137-195 (357)
404 3s5w_A L-ornithine 5-monooxyge 50.5 12 0.00042 38.7 4.3 39 357-403 30-69 (463)
405 3v76_A Flavoprotein; structura 50.4 12 0.00042 39.3 4.4 35 357-403 27-61 (417)
406 3oig_A Enoyl-[acyl-carrier-pro 50.3 18 0.00063 34.5 5.2 79 354-448 4-98 (266)
407 3uuw_A Putative oxidoreductase 50.3 11 0.00037 37.4 3.7 91 355-469 4-95 (308)
408 4gcm_A TRXR, thioredoxin reduc 50.2 13 0.00046 36.0 4.3 32 358-401 7-38 (312)
409 1yqd_A Sinapyl alcohol dehydro 50.2 32 0.0011 35.1 7.3 50 340-401 171-220 (366)
410 4imr_A 3-oxoacyl-(acyl-carrier 50.1 57 0.0019 31.8 8.8 76 354-447 30-119 (275)
411 4g6h_A Rotenone-insensitive NA 50.1 7.1 0.00024 42.1 2.5 32 358-401 43-74 (502)
412 1mo9_A ORF3; nucleotide bindin 50.1 13 0.00044 39.9 4.5 35 356-402 42-76 (523)
413 4dry_A 3-oxoacyl-[acyl-carrier 50.0 13 0.00044 36.6 4.2 79 352-448 28-122 (281)
414 3oqb_A Oxidoreductase; structu 49.9 12 0.00041 38.3 4.1 96 355-469 4-112 (383)
415 3t7c_A Carveol dehydrogenase; 49.9 59 0.002 31.9 9.0 38 353-401 24-61 (299)
416 2qcu_A Aerobic glycerol-3-phos 49.8 14 0.00047 39.4 4.6 34 357-402 3-36 (501)
417 3tsc_A Putative oxidoreductase 49.8 36 0.0012 32.9 7.3 39 353-402 7-45 (277)
418 3ktd_A Prephenate dehydrogenas 49.6 19 0.00065 37.3 5.6 91 358-472 9-101 (341)
419 3k30_A Histamine dehydrogenase 49.4 17 0.00058 40.6 5.5 34 357-402 391-424 (690)
420 2pnf_A 3-oxoacyl-[acyl-carrier 49.3 30 0.001 32.2 6.5 38 353-401 3-40 (248)
421 3pxx_A Carveol dehydrogenase; 49.3 39 0.0013 32.4 7.4 38 354-402 7-44 (287)
422 3euw_A MYO-inositol dehydrogen 49.3 9.5 0.00032 38.4 3.2 89 358-468 5-93 (344)
423 2yqu_A 2-oxoglutarate dehydrog 49.2 14 0.00048 38.5 4.6 33 358-402 2-34 (455)
424 4eez_A Alcohol dehydrogenase 1 49.2 39 0.0013 33.6 7.7 49 341-401 149-197 (348)
425 2a8x_A Dihydrolipoyl dehydroge 49.2 13 0.00044 38.9 4.3 33 357-401 3-35 (464)
426 1t2a_A GDP-mannose 4,6 dehydra 49.2 34 0.0011 34.2 7.2 101 358-472 25-156 (375)
427 3rd5_A Mypaa.01249.C; ssgcid, 49.1 13 0.00043 36.4 4.0 77 354-448 13-97 (291)
428 4hv4_A UDP-N-acetylmuramate--L 49.1 21 0.00071 38.5 6.0 107 357-499 22-130 (494)
429 4b63_A L-ornithine N5 monooxyg 49.1 10 0.00035 40.6 3.6 23 358-380 40-62 (501)
430 3cgb_A Pyridine nucleotide-dis 49.1 13 0.00044 39.3 4.3 37 358-404 37-73 (480)
431 1fjh_A 3alpha-hydroxysteroid d 49.1 28 0.00096 32.8 6.3 70 358-448 2-73 (257)
432 2hcy_A Alcohol dehydrogenase 1 49.0 30 0.001 34.7 6.8 45 344-401 158-203 (347)
433 3gvc_A Oxidoreductase, probabl 49.0 9.5 0.00032 37.5 3.0 78 353-448 25-114 (277)
434 4dyv_A Short-chain dehydrogena 48.9 15 0.00051 36.0 4.4 77 354-448 25-113 (272)
435 2zat_A Dehydrogenase/reductase 48.8 52 0.0018 31.2 8.2 39 352-401 9-47 (260)
436 1zmd_A Dihydrolipoyl dehydroge 48.7 14 0.00049 38.7 4.5 34 357-402 6-39 (474)
437 1m6i_A Programmed cell death p 48.6 13 0.00044 39.7 4.2 38 356-403 10-47 (493)
438 3uve_A Carveol dehydrogenase ( 48.6 31 0.001 33.5 6.6 38 353-401 7-44 (286)
439 4ep1_A Otcase, ornithine carba 48.5 97 0.0033 32.5 10.7 131 295-447 121-257 (340)
440 4gde_A UDP-galactopyranose mut 48.5 17 0.00058 37.8 5.0 23 357-379 10-32 (513)
441 2ew2_A 2-dehydropantoate 2-red 48.5 16 0.00056 35.4 4.6 101 358-476 4-112 (316)
442 3tox_A Short chain dehydrogena 48.5 26 0.00089 34.4 6.1 37 354-401 5-41 (280)
443 3v8b_A Putative dehydrogenase, 48.3 30 0.001 33.9 6.5 77 354-448 25-116 (283)
444 1q1r_A Putidaredoxin reductase 48.3 17 0.00059 37.8 5.1 37 357-403 4-40 (431)
445 2o23_A HADH2 protein; HSD17B10 48.3 22 0.00075 33.6 5.4 78 353-448 8-97 (265)
446 1trb_A Thioredoxin reductase; 48.2 8.4 0.00029 37.3 2.5 34 356-401 4-37 (320)
447 3ntd_A FAD-dependent pyridine 48.2 19 0.00064 38.5 5.4 37 358-404 2-38 (565)
448 1ebd_A E3BD, dihydrolipoamide 48.2 13 0.00046 38.7 4.2 32 358-401 4-35 (455)
449 2bgk_A Rhizome secoisolaricire 48.2 12 0.0004 35.8 3.5 38 353-401 12-49 (278)
450 3rkr_A Short chain oxidoreduct 48.1 46 0.0016 31.8 7.7 76 354-447 26-116 (262)
451 3ko8_A NAD-dependent epimerase 48.1 39 0.0013 32.6 7.2 94 359-472 2-113 (312)
452 3moi_A Probable dehydrogenase; 48.1 9.4 0.00032 39.4 3.0 89 358-468 3-92 (387)
453 3oec_A Carveol dehydrogenase ( 48.0 33 0.0011 34.2 6.9 37 354-401 43-79 (317)
454 1ges_A Glutathione reductase; 48.0 12 0.00042 39.1 3.9 33 357-401 4-36 (450)
455 3f9i_A 3-oxoacyl-[acyl-carrier 48.0 8.9 0.0003 36.3 2.6 79 352-448 9-95 (249)
456 3db2_A Putative NADPH-dependen 47.6 15 0.00052 37.1 4.4 91 357-469 5-95 (354)
457 2wsb_A Galactitol dehydrogenas 47.6 16 0.00056 34.3 4.3 38 353-401 7-44 (254)
458 2weu_A Tryptophan 5-halogenase 47.5 13 0.00043 39.4 3.9 37 358-403 3-39 (511)
459 1fmc_A 7 alpha-hydroxysteroid 47.4 23 0.00079 33.2 5.3 38 353-401 7-44 (255)
460 1rpn_A GDP-mannose 4,6-dehydra 47.4 33 0.0011 33.5 6.6 103 356-472 13-138 (335)
461 3grk_A Enoyl-(acyl-carrier-pro 47.3 19 0.00066 35.5 5.0 80 353-448 27-120 (293)
462 3o0h_A Glutathione reductase; 47.1 17 0.0006 38.3 4.9 33 357-401 26-58 (484)
463 3rih_A Short chain dehydrogena 46.9 35 0.0012 33.8 6.8 78 353-448 37-130 (293)
464 3sc4_A Short chain dehydrogena 46.9 59 0.002 31.7 8.4 38 353-401 5-42 (285)
465 3lf2_A Short chain oxidoreduct 46.9 29 0.00099 33.4 6.1 38 353-401 4-41 (265)
466 1onf_A GR, grase, glutathione 46.9 15 0.00052 39.1 4.4 33 358-402 3-35 (500)
467 4eye_A Probable oxidoreductase 46.8 21 0.00072 36.0 5.3 49 341-401 144-193 (342)
468 1qsg_A Enoyl-[acyl-carrier-pro 46.8 21 0.00072 34.2 5.1 78 355-448 7-98 (265)
469 2bc0_A NADH oxidase; flavoprot 46.8 19 0.00065 38.2 5.1 37 357-402 35-71 (490)
470 2v3a_A Rubredoxin reductase; a 46.7 15 0.00051 37.4 4.1 35 357-401 4-38 (384)
471 1kyq_A Met8P, siroheme biosynt 46.7 12 0.00041 38.0 3.4 36 354-401 10-45 (274)
472 1f8f_A Benzyl alcohol dehydrog 46.5 45 0.0015 33.8 7.7 50 340-400 174-223 (371)
473 3l8k_A Dihydrolipoyl dehydroge 46.4 18 0.0006 38.1 4.8 35 357-403 4-38 (466)
474 2bry_A NEDD9 interacting prote 46.2 18 0.00061 38.7 4.9 37 356-404 91-127 (497)
475 2gn4_A FLAA1 protein, UDP-GLCN 46.0 15 0.0005 37.1 4.0 101 353-472 17-142 (344)
476 3lad_A Dihydrolipoamide dehydr 46.0 19 0.00066 37.7 5.0 33 357-401 3-35 (476)
477 2x6t_A ADP-L-glycero-D-manno-h 46.0 30 0.001 34.3 6.2 102 355-472 44-163 (357)
478 1w4x_A Phenylacetone monooxyge 46.0 19 0.00064 38.8 5.0 36 355-402 14-49 (542)
479 2qa2_A CABE, polyketide oxygen 45.9 17 0.00059 38.9 4.7 34 356-401 11-44 (499)
480 3uxy_A Short-chain dehydrogena 45.8 41 0.0014 32.6 7.0 76 354-448 25-105 (266)
481 3qiv_A Short-chain dehydrogena 45.8 32 0.0011 32.5 6.1 77 353-447 5-96 (253)
482 1lvl_A Dihydrolipoamide dehydr 45.8 17 0.00059 38.1 4.6 33 357-401 5-37 (458)
483 1oi7_A Succinyl-COA synthetase 45.8 15 0.0005 37.2 3.9 126 357-520 7-136 (288)
484 3ctm_A Carbonyl reductase; alc 45.7 32 0.0011 33.0 6.1 36 354-401 31-67 (279)
485 3evn_A Oxidoreductase, GFO/IDH 45.7 24 0.00082 35.4 5.5 93 356-469 4-96 (329)
486 4a5l_A Thioredoxin reductase; 45.7 15 0.0005 35.4 3.8 32 358-401 5-36 (314)
487 1wly_A CAAR, 2-haloacrylate re 45.6 36 0.0012 33.9 6.8 50 340-401 129-179 (333)
488 2fzw_A Alcohol dehydrogenase c 45.5 43 0.0015 33.9 7.4 39 352-401 186-224 (373)
489 2e4g_A Tryptophan halogenase; 45.5 19 0.00063 39.0 4.9 38 357-403 25-62 (550)
490 3gem_A Short chain dehydrogena 45.5 25 0.00085 34.1 5.4 80 354-448 24-110 (260)
491 2aqj_A Tryptophan halogenase, 45.4 18 0.0006 38.8 4.7 38 357-403 5-42 (538)
492 3qj4_A Renalase; FAD/NAD(P)-bi 45.3 13 0.00044 36.9 3.3 35 358-401 2-36 (342)
493 2jl1_A Triphenylmethane reduct 45.2 19 0.00064 34.4 4.4 98 359-472 2-107 (287)
494 1p0f_A NADP-dependent alcohol 45.2 44 0.0015 33.9 7.4 39 352-401 187-225 (373)
495 2cdc_A Glucose dehydrogenase g 45.0 54 0.0018 33.2 8.0 33 357-401 181-213 (366)
496 1v59_A Dihydrolipoamide dehydr 44.9 19 0.00066 37.7 4.8 34 357-402 5-38 (478)
497 1xhc_A NADH oxidase /nitrite r 44.8 13 0.00045 37.9 3.5 35 357-404 8-42 (367)
498 3gwf_A Cyclohexanone monooxyge 44.7 16 0.00053 39.9 4.2 36 356-402 7-42 (540)
499 1gy8_A UDP-galactose 4-epimera 44.7 30 0.001 34.7 6.1 45 428-472 83-144 (397)
500 3ftp_A 3-oxoacyl-[acyl-carrier 44.6 31 0.0011 33.6 5.9 78 353-448 24-116 (270)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=1.6e-207 Score=1673.67 Aligned_cols=540 Identities=53% Similarity=0.958 Sum_probs=532.5
Q ss_pred ccccccccCCCCccCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHHhcCCCchhhHHHHHHHHhhhhhhhHHHhhc
Q 007112 76 ASGYTLLRDPRHNKGLAFTENERDAHYLRGLLPPALMNQELQEKRLMHNLRQYKVPLQRYVAMMDLQERNERLFYKLLID 155 (617)
Q Consensus 76 ~~G~~lL~~p~~NKG~aFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~rNe~LFY~ll~~ 155 (617)
++|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++++|+||+||++||++||+||||++++
T Consensus 1 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 80 (555)
T 1gq2_A 1 KKGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTS 80 (555)
T ss_dssp CCTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CChhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhcCcceeeehhhHhh
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCcccchhhHHHHHHHhhhhcCCCcccccccccccHHHHHhcCCCCCeeEEEEecCceeecCCCCCCCcccchhh
Q 007112 156 NVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVG 235 (617)
Q Consensus 156 ~~ee~lPivYTPtVG~ac~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iG 235 (617)
|++|+|||+||||||++|++||+|||+|+|+|||++|+|+++++++|||.++|+|||||||||||||||+|++|||||||
T Consensus 81 ~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g~~ipvG 160 (555)
T 1gq2_A 81 DIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVG 160 (555)
T ss_dssp THHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCGGGGGHHHHH
T ss_pred hHHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCCCCccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhhcCCCCCceeeEEeecCCCccccccCcccccccccCCChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCCcH
Q 007112 236 KLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNA 315 (617)
Q Consensus 236 Kl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~DplYlG~r~~R~~g~eY~~fidefv~av~~~fGp~~lIqfEDf~~~~A 315 (617)
|++|||+||||||++|||||||||||||+||+||+||||||+|++|++||+|+||||++|+++|||+++||||||+++||
T Consensus 161 Kl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~~EDf~~~~a 240 (555)
T 1gq2_A 161 KLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANA 240 (555)
T ss_dssp HHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEeecccCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCceeecCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeE
Q 007112 316 FELLSKYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKI 395 (617)
Q Consensus 316 f~lL~ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i 395 (617)
|++|+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||+++|
T Consensus 241 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~-G~~~eeA~~~i 319 (555)
T 1gq2_A 241 FRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKE-GVSKEEAIKRI 319 (555)
T ss_dssp HHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHH-TCCHHHHHTTE
T ss_pred HHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChHHHhCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999985 99999999999
Q ss_pred EEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007112 396 WLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 396 ~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 475 (617)
||||++|||+++|. +|+++|++||++.++.++|+|||+.+|||||||+|+++|+||||||++|+++|+|||||||||||
T Consensus 320 ~~~D~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt 398 (555)
T 1gq2_A 320 WMVDSKGLIVKGRA-SLTPEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPT 398 (555)
T ss_dssp EEEETTEECBTTCS-SCCTTGGGGCBSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSSG
T ss_pred EEEECCCeeeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCC
Confidence 99999999999996 59999999999877788999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHhccccCcEEEeeCCCCCccee-CCeeeccCCCCcccccchhhHHHHHhCCcccCHHHHHHHHHHHHhccC
Q 007112 476 SQSECTAEEAYTWSKGQAIFASGSPFDPVEY-NGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAAQVT 554 (617)
Q Consensus 476 ~~aEct~edA~~wT~GraifASGSPF~pv~~-~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v~ 554 (617)
+++|||||||++||+|+|||||||||+||+| +||+++||||||+|+|||||||+++++|++|||+|+++||+|||++++
T Consensus 399 ~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~alA~~v~ 478 (555)
T 1gq2_A 399 SKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTTAEVIAQEVS 478 (555)
T ss_dssp GGCSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHTCC
T ss_pred CccCcCHHHHHHhccCCEEEEeCCCCCCeeecCCcEeccccccceeeccchhhhhHhcCCeECCHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCccCCCCChhhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCccCCCCCCC
Q 007112 555 QEHFDKGLIYPPFTNIRKISAHIAAKVAAKAYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR 617 (617)
Q Consensus 555 ~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~GlA~~~~~p~dl~~~i~~~m~~P~Y~~~~ 617 (617)
++++..+.|||++++||+||.+||.||+++|+++|+|+..++|+|+.+|++++||+|.|++|+
T Consensus 479 ~~~~~~~~i~P~~~~ir~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~~~~P~Y~~~~ 541 (555)
T 1gq2_A 479 EENLQEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTASTYPQPEDLEAFIRSQVYSTDYNCFV 541 (555)
T ss_dssp HHHHHHTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHHTTSCCCSCCCCS
T ss_pred cccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHhccCCCCCCcc
Confidence 999999999999999999999999999999999999998888899999999999999999874
No 2
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=1.3e-206 Score=1670.69 Aligned_cols=541 Identities=51% Similarity=0.928 Sum_probs=532.7
Q ss_pred ccccccccCCCCccCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHHhcCCCchhhHHHHHHHHhhhhhhhHHHhhc
Q 007112 76 ASGYTLLRDPRHNKGLAFTENERDAHYLRGLLPPALMNQELQEKRLMHNLRQYKVPLQRYVAMMDLQERNERLFYKLLID 155 (617)
Q Consensus 76 ~~G~~lL~~p~~NKG~aFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~rNe~LFY~ll~~ 155 (617)
.+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++++|+||+||++||++||+||||++++
T Consensus 3 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 82 (564)
T 1pj3_A 3 EKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQD 82 (564)
T ss_dssp CCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCCSHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CchHHHhCCCcccCCCCCCHHHHHhCCCCcCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhhcccceeehhhhhh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCcccchhhHHHHHHHhhhhcCCCcccccccccccHHHHHhcCCCCCeeEEEEecCceeecCCCCCCCcccchhh
Q 007112 156 NVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVG 235 (617)
Q Consensus 156 ~~ee~lPivYTPtVG~ac~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iG 235 (617)
|++|+|||+||||||++|++||+|||+|+|+|||++|+|+|+++|+|||.++|+|||||||||||||||+|++|||||||
T Consensus 83 ~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD~G~~gm~ipvG 162 (564)
T 1pj3_A 83 DIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVG 162 (564)
T ss_dssp CHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCCCGGGGGHHHHH
T ss_pred CHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHHhCCCCCceEEEEEcccccccCCCCCCCcccceeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhhcCCCCCceeeEEeecCCCccccccCcccccccccCCChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCCcH
Q 007112 236 KLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNA 315 (617)
Q Consensus 236 Kl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~DplYlG~r~~R~~g~eY~~fidefv~av~~~fGp~~lIqfEDf~~~~A 315 (617)
|++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+++|||+++||||||+++||
T Consensus 163 Kl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~I~~EDf~~~~a 242 (564)
T 1pj3_A 163 KLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNA 242 (564)
T ss_dssp HHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcEEeehhcCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCceeecCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeE
Q 007112 316 FELLSKYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKI 395 (617)
Q Consensus 316 f~lL~ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i 395 (617)
|++|+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||+++|
T Consensus 243 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~-Gl~~eeA~~~i 321 (564)
T 1pj3_A 243 FRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVEN-GLSEQEAQKKI 321 (564)
T ss_dssp HHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHHT-TCCHHHHHHTE
T ss_pred HHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHHc-CCChHHhhCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999985 99999999999
Q ss_pred EEEccCCcccCCcccCCchhchhhhcccCCC--CCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007112 396 WLVDSKGLIVSSRKESLQHFKKPWAHEHAPI--KSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN 473 (617)
Q Consensus 396 ~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~--~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 473 (617)
||||++|||+++|.++|+++|++||++.++. ++|+|||+.+|||||||+|+++|+||||||++|+++|+|||||||||
T Consensus 322 ~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN 401 (564)
T 1pj3_A 322 WMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSN 401 (564)
T ss_dssp EEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCS
T ss_pred EEEeCCCeEECCCcccchHHHHHHHHhcCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCC
Confidence 9999999999999445999999999987766 79999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHhccccCcEEEeeCCCCCccee-CCeeeccCCCCcccccchhhHHHHHhCCcccCHHHHHHHHHHHHhc
Q 007112 474 PTSQSECTAEEAYTWSKGQAIFASGSPFDPVEY-NGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAAQ 552 (617)
Q Consensus 474 Pt~~aEct~edA~~wT~GraifASGSPF~pv~~-~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~ 552 (617)
||+++|||||||++||+|+|||||||||+||+| +||+|+||||||+|+|||||||+++++|++|||+|+++||+|||++
T Consensus 402 Pt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~G~~~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~aLA~~ 481 (564)
T 1pj3_A 402 PTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAAKALTSQ 481 (564)
T ss_dssp SGGGCSCCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHTTCSCCCHHHHHHHHHHHHTT
T ss_pred CCCccCcCHHHHHhhccCCEEEEeCCCCCceeecCCceecccccceeeeccchhhhhHhcCCeECCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred cCcccCCCCCccCCCCChhhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCccCCCCCCC
Q 007112 553 VTQEHFDKGLIYPPFTNIRKISAHIAAKVAAKAYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR 617 (617)
Q Consensus 553 v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~GlA~~~~~p~dl~~~i~~~m~~P~Y~~~~ 617 (617)
++++++..+.|||+++++|+||.+||.||+++|+++|+|+..+.|+|+.+|++++||+|.|++|+
T Consensus 482 v~~~~~~~~~i~P~~~~~r~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~~~~p~Y~~~~ 546 (564)
T 1pj3_A 482 LTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYVKERTWRSEYDSLL 546 (564)
T ss_dssp CCHHHHHTTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHHHTCCCCSCCCCC
T ss_pred cccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHhhCCCCCCcc
Confidence 99999999999999999999999999999999999999998888899999999999999999874
No 3
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=9.5e-207 Score=1676.05 Aligned_cols=544 Identities=49% Similarity=0.869 Sum_probs=535.3
Q ss_pred ccccccccccccCCCCccCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHHhcCCCchhhHHHHHHHHhhhhhhhHH
Q 007112 72 TVSVASGYTLLRDPRHNKGLAFTENERDAHYLRGLLPPALMNQELQEKRLMHNLRQYKVPLQRYVAMMDLQERNERLFYK 151 (617)
Q Consensus 72 ~~~~~~G~~lL~~p~~NKG~aFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~rNe~LFY~ 151 (617)
..+..+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++++|+||+||++||++||+||||
T Consensus 33 ~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfyr 112 (605)
T 1o0s_A 33 VTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLARYIQLDGLQDRNEKLFYR 112 (605)
T ss_dssp CCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHCHHHHHH
T ss_pred cccCcchHHHhCCCcccCCCCCCHHHHHHCCCCcCCCCCcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHhhcccchhhhh
Confidence 44567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCccccCCcccchhhHHHHHHHhhhhcCCCccccccccc--ccHHHHHhcCCCCCeeEEEEecCceeecCCCCCCCc
Q 007112 152 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEK--GKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQG 229 (617)
Q Consensus 152 ll~~~~ee~lPivYTPtVG~ac~~~s~i~r~p~Glyis~~d~--g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~G 229 (617)
++++|++|+|||+||||||++|++||+|||+|+|+|||++|+ |+|+++|+|||.++|+|||||||||||||||+|++|
T Consensus 113 ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g 192 (605)
T 1o0s_A 113 VVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYG 192 (605)
T ss_dssp HHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEECSSCBTTTBCCGGGG
T ss_pred hhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHHHhcCCCCCceEEEEEccccceecCCCCCCc
Confidence 999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred ccchhhhHHHHhhhcCCCCCceeeEEeecCCCccccccCcccccccccCCChhhHHHHHHHHHHHHHHhcCCCeeeeeec
Q 007112 230 MGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFED 309 (617)
Q Consensus 230 mgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~DplYlG~r~~R~~g~eY~~fidefv~av~~~fGp~~lIqfED 309 (617)
|||||||++|||+||||||++|||||||||||||+||+||+||||||+|++|++||+|+||||++|+++|||+++|||||
T Consensus 193 ~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~~~fGp~~~I~~ED 272 (605)
T 1o0s_A 193 IGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQFED 272 (605)
T ss_dssp GHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHHHHHhCCCcEeeHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHcCCCceeecCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHH
Q 007112 310 FANHNAFELLSKYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIE 389 (617)
Q Consensus 310 f~~~~Af~lL~ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~e 389 (617)
|+++|||+||+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|++ .|+|+|
T Consensus 273 f~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~-~Gl~~e 351 (605)
T 1o0s_A 273 FANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQN-EGISKE 351 (605)
T ss_dssp CCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHT-TTCCHH
T ss_pred cCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHH-cCCChh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997 499999
Q ss_pred hhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEE
Q 007112 390 EARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIF 469 (617)
Q Consensus 390 eAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 469 (617)
||+++|||||++|||+++|. +|+++|++||++.++.++|+|||+.+|||||||+|+++|+||||||++|+++|+|||||
T Consensus 352 eA~~~i~~vD~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIF 430 (605)
T 1o0s_A 352 EACNRIYLMDIDGLVTKNRK-EMNPRHVQFAKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIF 430 (605)
T ss_dssp HHHHTEEEEETTEECBTTCS-SCCGGGTTTCBSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEE
T ss_pred hhhCeEEEEECCCceeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEE
Confidence 99999999999999999996 59999999999877788999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCcceeCCeeeccCCCCcccccchhhHHHHHhCCcccCHHHHHHHHHHH
Q 007112 470 ALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEAL 549 (617)
Q Consensus 470 aLSNPt~~aEct~edA~~wT~GraifASGSPF~pv~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aL 549 (617)
||||||+++|||||||++||+|+|||||||||+||+|+||+++||||||+|||||||||+++++|++|||+|+++||+||
T Consensus 431 aLSNPt~~aE~~pe~a~~~t~G~aivATGspF~pV~~~Grs~~pnQ~NN~liFPGi~lGal~~~A~~Itd~M~~aAA~aL 510 (605)
T 1o0s_A 431 ALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFELNGHTYKPGQGNNAYIFPGVALGTILFQIRHVDNDLFLLAAKKV 510 (605)
T ss_dssp ECCSSGGGCSSCHHHHHHTTTSCCEEEESSCCCCEEETTEEECCEECCGGGTHHHHHHHHHHHTBSCCCHHHHHHHHHHH
T ss_pred ECCCCCCCcCcCHHHHHhhccCCEEEEECCCCCCeeECCEEeccccccceeeccchhhhhhhcCCeEcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCcccCCCCCccCCCCChhhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCccCCCCCCC
Q 007112 550 AAQVTQEHFDKGLIYPPFTNIRKISAHIAAKVAAKAYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR 617 (617)
Q Consensus 550 A~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~GlA~~~~~p~dl~~~i~~~m~~P~Y~~~~ 617 (617)
|++++++++..|.|||++++||+||.+||.||+++|+++|+|+..+.|+|+.+|++++||+|.|++|+
T Consensus 511 A~~v~~~~~~~~~i~P~~~dir~vs~~VA~AVa~~A~~~GvA~~~~~~~d~~~~i~~~~w~P~Y~~~~ 578 (605)
T 1o0s_A 511 ASCVTEDSLKVGRVYPQLKEIREISIQIAVEMAKYCYKNGTANLYPQPEDLEKYVRAQVYNTEYEELI 578 (605)
T ss_dssp HHTCCHHHHTTTCCSCCGGGHHHHHHHHHHHHHHHHHHTTCBCSSSCCSCHHHHHHHHSCCCSCCCCS
T ss_pred HhhcccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHhccCCCCCccc
Confidence 99999999999999999999999999999999999999999998888899999999999999999874
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=1.2e-121 Score=984.26 Aligned_cols=382 Identities=31% Similarity=0.416 Sum_probs=344.8
Q ss_pred cCccccCCcccchhhHHHHHHHhhhhcCCCcccccccccccHHHHHhcCCCCCeeEEEEecCceeecCCCCCC-Ccccch
Q 007112 155 DNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGC-QGMGIP 233 (617)
Q Consensus 155 ~~~ee~lPivYTPtVG~ac~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~-~GmgI~ 233 (617)
++. +.|||+||||||++|++|+ +|+++++++..+| ++|||||||||||||||+|+ +|||||
T Consensus 56 ~~~-~dLslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~VaVVTDG~aILGLGDiG~~agmpIm 117 (487)
T 3nv9_A 56 AGF-NWFNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFVGVVSDSTRVLGDGDVTPPGGLGVM 117 (487)
T ss_dssp SSG-GGHHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEEEEEECSSSBGGGBCCCGGGGHHHH
T ss_pred CCH-HHCeeeeCcchHHHHHHHH-------------hChHHHhhhcccC----CEEEEEEcCceeeeccccccccCCchh
Confidence 344 4599999999999999986 4677888777666 48999999999999999999 599999
Q ss_pred hhhHHHHhhhcCCCCCceeeEEeecCCCccccccCcccccccccCCChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCC
Q 007112 234 VGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANH 313 (617)
Q Consensus 234 iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~DplYlG~r~~R~~g~eY~~fidefv~av~~~fGp~~lIqfEDf~~~ 313 (617)
+||++|||+||||| |||||||+||+| +++|| |+|+ |||+++.++||. ||||||+++
T Consensus 118 eGKl~Lyk~~aGId---~lPI~LD~gt~~--~~~d~---------------defv-e~v~~~~P~fG~---InlEDf~ap 173 (487)
T 3nv9_A 118 EGKALLMKYLGGID---AVPICIDSKNKE--GKNDP---------------DAVI-EFVQRIQHTFGA---INLEDISQP 173 (487)
T ss_dssp HHHHHHHHHHHCCE---EEEEECCCBCTT--SCBCH---------------HHHH-HHHHHHGGGCSE---EEECSCCTT
T ss_pred hhHHHHHHhcCCCc---eeeeEEeCCCcc--ccCCH---------------HHHH-HHHHHhCCCCCe---ecHhhcCCc
Confidence 99999999999999 999999999765 45664 3333 455666666655 999999999
Q ss_pred cHHHHHHHHcC--CCceeecCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhh
Q 007112 314 NAFELLSKYSS--SHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEA 391 (617)
Q Consensus 314 ~Af~lL~ryr~--~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA 391 (617)
|||++|+|||+ +||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+. .|+++
T Consensus 174 ~af~il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~-----~G~~~--- 245 (487)
T 3nv9_A 174 NCYKILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVT-----AGADP--- 245 (487)
T ss_dssp HHHHHHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHH-----TTCCG---
T ss_pred hHHHHHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHH-----cCCCc---
Confidence 99999999998 799999999999999999999999999999999999999999999999999975 49986
Q ss_pred cCeEEEEccCCcccCCcccCCc-----hhchhhhccc--CCCCCHHHHHhccCCcEEEeecCC-CCCCCHHHHHHHHcCC
Q 007112 392 RKKIWLVDSKGLIVSSRKESLQ-----HFKKPWAHEH--APIKSLLDAVKAIKPTMLMGTSGV-GKTFTKEVVEAMASFN 463 (617)
Q Consensus 392 r~~i~lvD~~GLi~~~R~~~L~-----~~k~~fA~~~--~~~~~L~eaV~~vkPtvLIG~S~~-~g~Fteevv~~Ma~~~ 463 (617)
++|||||++|||+++|.+ |. ++|.+||++. ++..+|+|||+. +|||||+|++ +|+||||+|++|+
T Consensus 246 -~~i~l~D~~Gli~~~R~~-l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~--adVlIG~S~~~pg~ft~e~V~~Ma--- 318 (487)
T 3nv9_A 246 -KKIVMFDSKGSLHNGRED-IKKDTRFYRKWEICETTNPSKFGSIAEACVG--ADVLISLSTPGPGVVKAEWIKSMG--- 318 (487)
T ss_dssp -GGEEEEETTEECCTTCHH-HHHCGGGHHHHHHHHHSCTTCCCSHHHHHTT--CSEEEECCCSSCCCCCHHHHHTSC---
T ss_pred -ccEEEEeccccccCCcch-hhhhcccHHHHHHHHhcccccCCCHHHHHhc--CCEEEEecccCCCCCCHHHHHhhc---
Confidence 899999999999999954 63 4667888864 256799999998 7999999977 7999999999996
Q ss_pred CCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCcceeCCeeeccCCCCcccccchhhHHHHHhCCcccCHHHHH
Q 007112 464 EKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLL 543 (617)
Q Consensus 464 erPIIFaLSNPt~~aEct~edA~~wT~GraifASGSPF~pv~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~l 543 (617)
+||||||||||| +|||||||++ +|+||||||| +++|||+||+|+|||||+|+++++|++|||+|++
T Consensus 319 ~~PIIFaLSNPt--pEi~pe~A~~--~G~aIvATGr----------sd~PnQ~NN~liFPGI~~Gal~~~A~~Itd~M~~ 384 (487)
T 3nv9_A 319 EKPIVFCCANPV--PEIYPYEAKE--AGAYIVATGR----------GDFPNQVNNSVGFPGILKGALIVRARKITDNMAI 384 (487)
T ss_dssp SSCEEEECCSSS--CSSCHHHHHH--TTCSEEEESC----------TTSSSBCCGGGTHHHHHHHHHHTTCSSCCHHHHH
T ss_pred CCCEEEECCCCC--ccCCHHHHHH--hCCEEEEECC----------CCCcccCcceeEcchhhHHHHHcCCcccCHHHHH
Confidence 899999999999 7999999998 5999999995 5779999999999999999999999999999999
Q ss_pred HHHHHHHhccCcccCCCCCccCCCCChhhhHHHHHHHHHHHHHHcCCCCCC-CCchhHHHHHHhCC
Q 007112 544 AASEALAAQVTQEHFDKGLIYPPFTNIRKISAHIAAKVAAKAYDLGLASRL-PRPKDLVSYAESCM 608 (617)
Q Consensus 544 aAA~aLA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~GlA~~~-~~p~dl~~~i~~~m 608 (617)
+||++||++++++++.++.|||++++ ++||.+||.||+++|+++|+|+.. ++++++.+++++.+
T Consensus 385 AAA~ALA~~v~~~~l~~~~i~P~~~d-~~Vs~~VA~AVa~aA~~~GvA~~~~~~~~~~~~~~~~~~ 449 (487)
T 3nv9_A 385 AASRALAEFAEKRGINPDNIIGTMDE-PGIFPKEAADVAMQAIKDGVARVTDLTWQQVYDIAEHDI 449 (487)
T ss_dssp HHHHHHHHHHHHTCCBTTBCSCCTTC-TTHHHHHHHHHHHHHHHHTCCSCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCcccCCCCceeCCccc-cchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999 689999999999999999999976 67889999988765
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=5.5e-113 Score=907.19 Aligned_cols=361 Identities=29% Similarity=0.426 Sum_probs=334.1
Q ss_pred hhhHHHhhcCccccCCcccchhhHHHHHHHhhhhcCCCcccccccccccHHHHHhcCCCCCeeEEEEecCceeecCCCCC
Q 007112 147 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLG 226 (617)
Q Consensus 147 ~LFY~ll~~~~ee~lPivYTPtVG~ac~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG 226 (617)
.+++++.+++.| +|||+||||||++|++|+ + |+++++ +|+.++++|+|||||+|||||||+|
T Consensus 23 ~~~~~~~~~~~~-~l~i~YtP~V~~~c~~i~---~----------~p~~v~----~~t~~~~~V~VvTdG~~iLGLGD~G 84 (398)
T 2a9f_A 23 EVQPKVDIKTKH-DLSIAYTPGVASVSSAIA---K----------DKTLAY----DLTTKKNTVAVISDGTAVLGLGDIG 84 (398)
T ss_dssp EEEESSCCSSHH-HHHHHSTTTTHHHHHHHH---H----------CGGGHH----HHSGGGTEEEEEECSSSCTTSCCCC
T ss_pred EEEEecccCCHH-HCeEEECchHHHHHHHHH---h----------CHHHHH----HhcccCCEEEEEECCccccCCCCcc
Confidence 466777888765 589999999999999987 3 445555 7899999999999999999999999
Q ss_pred CC-cccchhhhHHHHhhhcCCCCCceeeEEeecCCCccccccCcccccccccCCChhhHHHHHHHHHHHHHHhcCCC-ee
Q 007112 227 CQ-GMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEK-VL 304 (617)
Q Consensus 227 ~~-GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~DplYlG~r~~R~~g~eY~~fidefv~av~~~fGp~-~l 304 (617)
++ ||+||+||+.||++||||| |+|||||||| +||||++|+..| |. ..
T Consensus 85 ~~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~-p~F~~ 133 (398)
T 2a9f_A 85 PEAAMPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALA-PTFGG 133 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eeeeEeCCCC---------------------------HHHHHHHHHHcC-CceeE
Confidence 98 9999999999999999999 9999999996 799999999999 88 89
Q ss_pred eeeecCCCCcHHHHHHHHcCC--CceeecCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHh
Q 007112 305 IQFEDFANHNAFELLSKYSSS--HLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSK 382 (617)
Q Consensus 305 IqfEDf~~~~Af~lL~ryr~~--~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~ 382 (617)
||||||+++|||++|+|||++ +|||||||||||+|++||++||+|++|++++|+||||+|||+||+|||++++.+
T Consensus 134 I~lED~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~--- 210 (398)
T 2a9f_A 134 INLEDISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAA--- 210 (398)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eccccCCChHHHHHHHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHc---
Confidence 999999999999999999985 999999999999999999999999999999999999999999999999999874
Q ss_pred ccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCC---CCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHH
Q 007112 383 QTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAP---IKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAM 459 (617)
Q Consensus 383 ~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~---~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~M 459 (617)
|. ++||++|++|||+++|.++|+++|++||++... ..+|+|+|+. +|||||+|+ +|+||+|+|++|
T Consensus 211 --Ga------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~--ADV~IG~Sa-pgl~T~EmVk~M 279 (398)
T 2a9f_A 211 --GA------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEG--ADIFIGVSA-PGVLKAEWISKM 279 (398)
T ss_dssp --TC------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHT--TCSEEECCS-TTCCCHHHHHTS
T ss_pred --CC------CeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhcc--CCEEEecCC-CCCCCHHHHHhh
Confidence 64 899999999999999933599999999997543 4689999998 899999999 899999999999
Q ss_pred HcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCcceeCCeeeccCCCCcccccchhhHHHHHhCCcccCH
Q 007112 460 ASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRD 539 (617)
Q Consensus 460 a~~~erPIIFaLSNPt~~aEct~edA~~wT~GraifASGSPF~pv~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd 539 (617)
+ ++|||||||||| +||+||||++| |+|||||| |+++|||+||+|+|||||+|+++++|++|||
T Consensus 280 a---~~pIIfalsNPt--~E~~pe~a~~~--g~~i~atG----------rs~~p~Q~NN~~~FPgi~~Gal~~~a~~I~d 342 (398)
T 2a9f_A 280 A---ARPVIFAMANPI--PEIYPDEALEA--GAYIVGTG----------RSDFPNQINNVLAFPGIFRGALDARAKTITV 342 (398)
T ss_dssp C---SSCEEEECCSSS--CSSCHHHHHTT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHTCSSCCH
T ss_pred C---CCCEEEECCCCC--ccCCHHHHHHh--CCeEEEeC----------CCCCCCcCCceeEcchHHHHHHHcCCcCCCH
Confidence 7 899999999999 89999999999 99999999 5899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCcccCCCCCccCCCCChhhhHHHHHHHHHHHHHHc
Q 007112 540 EMLLAASEALAAQVTQEHFDKGLIYPPFTNIRKISAHIAAKVAAKAYDL 588 (617)
Q Consensus 540 ~M~laAA~aLA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~ 588 (617)
+|+++||++||++++++++.++.|||++++ ++||.+||.||+++|++.
T Consensus 343 ~m~~aAa~alA~~~~~~~~~~~~i~P~~~~-~~v~~~VA~aVa~~A~~~ 390 (398)
T 2a9f_A 343 EMQIAAAKGIASLVPDDALSTTNIIPDAFK-EGVAEIVAKSVRSVVLKS 390 (398)
T ss_dssp HHHHHHHHHHHHTCSSCSSCCSCCSCSSTT-HHHHHHHTTTTCCCCC--
T ss_pred HHHHHHHHHHHhcCCcccCCCCccCCCCCc-chhHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 999999999999999864
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=1.1e-107 Score=865.06 Aligned_cols=354 Identities=30% Similarity=0.435 Sum_probs=331.9
Q ss_pred hhhHHHhhcCccccCCcccchhhHHHHHHHhhhhcCCCcccccccccccHHHHHhcCCCCCeeEEEEecCceeecCCCCC
Q 007112 147 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLG 226 (617)
Q Consensus 147 ~LFY~ll~~~~ee~lPivYTPtVG~ac~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG 226 (617)
..++++.++|.|+ |||+||||||++|++|+ ++|.+ ++ +|+.++++|+|||||+|||||||+|
T Consensus 27 ~~~~~~~~~~~~~-l~i~YtP~V~~~c~~~~---~~p~~----------v~----~~t~~~~~V~VvTdg~~vLGlGD~G 88 (388)
T 1vl6_A 27 RTALPVEKVDRET-LSLLYTPGVADVARACA---EDPEK----------TY----VYTSRWNTVAVVSDGSAVLGLGNIG 88 (388)
T ss_dssp EEECSCSCCCHHH-HHHHSTTTHHHHHHHHH---HCGGG----------HH----HHSGGGGEEEEEECSTTBTTTBSCC
T ss_pred EEEEeeecCCHHH-CeEEECchHHHHHHHHH---hCHHH----------HH----hhcccCCeEEEEECCccccCCCccc
Confidence 6788889998876 89999999999999987 55544 44 7899999999999999999999999
Q ss_pred CC-cccchhhhHHHHhhhcCCCCCceeeEEeecCCCccccccCcccccccccCCChhhHHHHHHHHHHHHHHhcCCC-ee
Q 007112 227 CQ-GMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEK-VL 304 (617)
Q Consensus 227 ~~-GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~DplYlG~r~~R~~g~eY~~fidefv~av~~~fGp~-~l 304 (617)
++ ||+||+||+.||++||||| |+|||||||| +||||++|++.| |. ..
T Consensus 89 ~~ag~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~~-p~f~~ 137 (388)
T 1vl6_A 89 PYGALPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSLE-PSFGG 137 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHTG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eEeEEeCCCC---------------------------HHHHHHHHHHcC-CcceE
Confidence 98 9999999999999999999 9999999996 799999999999 87 88
Q ss_pred eeeecCCCCcHHHHHHHHcC--CCceeecCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHh
Q 007112 305 IQFEDFANHNAFELLSKYSS--SHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSK 382 (617)
Q Consensus 305 IqfEDf~~~~Af~lL~ryr~--~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~ 382 (617)
||||||+++|||++|+|||+ ++|||||||||||+|++||+++|++++|++++|+||||+|||+||++||++++..
T Consensus 138 i~lED~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~--- 214 (388)
T 1vl6_A 138 INLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDL--- 214 (388)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eCHhhcCCHHHHHHHHHhhhhcCcceeccccccHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhC---
Confidence 99999999999999999997 5999999999999999999999999999999999999999999999999999864
Q ss_pred ccCCCHHhhcCeEEEEccCCcccCCcccC-CchhchhhhcccCC---CCCHHHHHhccCCcEEEeecCCCCCCCHHHHHH
Q 007112 383 QTKAPIEEARKKIWLVDSKGLIVSSRKES-LQHFKKPWAHEHAP---IKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEA 458 (617)
Q Consensus 383 ~~G~s~eeAr~~i~lvD~~GLi~~~R~~~-L~~~k~~fA~~~~~---~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~ 458 (617)
| .++||++|++|||+.+|.+. |+++|++||++... ..+|.|+|+. +|+|||+|+ +|+||+|+|+.
T Consensus 215 --G------~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~--ADVlIG~Sa-p~l~t~emVk~ 283 (388)
T 1vl6_A 215 --G------VKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEG--ADFFIGVSR-GNILKPEWIKK 283 (388)
T ss_dssp --T------CCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTT--CSEEEECSC-SSCSCHHHHTT
T ss_pred --C------CCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHcc--CCEEEEeCC-CCccCHHHHHh
Confidence 6 38999999999999999643 99999999987443 4689999998 899999999 79999999999
Q ss_pred HHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCcceeCCeeeccCCCCcccccchhhHHHHHhCCcccC
Q 007112 459 MASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVR 538 (617)
Q Consensus 459 Ma~~~erPIIFaLSNPt~~aEct~edA~~wT~GraifASGSPF~pv~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~It 538 (617)
|+ ++||||+||||| +||+||||++| |+|||||| |+++|||+||+|+|||||+|+++++|+ ||
T Consensus 284 Ma---~~pIIfalSNPt--~E~~p~~a~~~--g~~i~atG----------r~~~p~Q~NN~~~FPgi~~Gal~~~a~-i~ 345 (388)
T 1vl6_A 284 MS---RKPVIFALANPV--PEIDPELAREA--GAFIVATG----------RSDHPNQVNNLLAFPGIMKGAVEKRSK-IT 345 (388)
T ss_dssp SC---SSCEEEECCSSS--CSSCHHHHHHT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHCSC-CC
T ss_pred cC---CCCEEEEcCCCC--CCCCHHHHHHh--cCeEEEeC----------CCCCCCcCCceeEcchHhHHHHhcCCc-cC
Confidence 97 799999999999 99999999999 99999999 589999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHhccCcccCCCCCccCCCCChhhhHHHHHHHHHHHH
Q 007112 539 DEMLLAASEALAAQVTQEHFDKGLIYPPFTNIRKISAHIAAKVAAKA 585 (617)
Q Consensus 539 d~M~laAA~aLA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A 585 (617)
|+|+++||++||+++ ++.++.|||++++ ++||.+||.||+++|
T Consensus 346 ~~m~~aAa~alA~~~---~~~~~~i~P~~~~-~~v~~~vA~aVa~~A 388 (388)
T 1vl6_A 346 KNMLLSAVEAIARSC---EPEPERIIPEAFD-MKVHLNVYTAVKGSA 388 (388)
T ss_dssp HHHHHHHHHHHHHTS---CCBTTBSSCCTTC-HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhhh---ccCCCcccCCCCc-chhhHHHHHHHHhhC
Confidence 999999999999999 6788999999999 999999999999875
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=1.9e-86 Score=713.78 Aligned_cols=385 Identities=30% Similarity=0.431 Sum_probs=350.2
Q ss_pred hhhHHHhhcCccccCCcccchhhHHHHHHHhhhhcCCCcccccccccccHHHHHhcCCCCCeeEEEEecCceeecCCCCC
Q 007112 147 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLG 226 (617)
Q Consensus 147 ~LFY~ll~~~~ee~lPivYTPtVG~ac~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG 226 (617)
..++++.+++.+ +|||+||||||++|++|++ |++++++ ||.++++|+|||||+|||||||+|
T Consensus 21 ~~~~~~~~~~~~-~l~~~YtP~v~~~c~~~~~-------------~~~~~~~----~~~~~~~v~vvtdgt~ilGlG~iG 82 (439)
T 2dvm_A 21 EVIPKVSLESRE-ELTLAYTPGVAEPCKEIAR-------------DPGKVYE----YTSKGNLVAVVSDGSRILGLGNIG 82 (439)
T ss_dssp EEEESSCCCSHH-HHHHHSTTTTHHHHHHHHH-------------CGGGHHH----HSSGGGEEEEEECSTTBTTTBCCC
T ss_pred EEEEeeccCCHH-HCeeEECchhHHHHHHHHH-------------CHHHHHh----hcccCcEEEEEECCCeEeccccee
Confidence 345677777765 5899999999999999983 7777774 888999999999999999999999
Q ss_pred CC-cccchhhhHHHHhhhcCCCCCceeeEEeecCCCccccccCcccccccccCCChhhHHHHHHHHHHHHHHhcCCC-ee
Q 007112 227 CQ-GMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEK-VL 304 (617)
Q Consensus 227 ~~-GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~DplYlG~r~~R~~g~eY~~fidefv~av~~~fGp~-~l 304 (617)
.+ ++|+++||++||++||||| ++|++||+. | .|||+++|+..+ |+ ..
T Consensus 83 ~hS~sPvmh~ka~lf~~~gGid---~~yi~ldv~--------d-------------------~de~~~~v~~l~-~~f~G 131 (439)
T 2dvm_A 83 PLAGLPVMEGKALLFKRFGGVD---AFPIMIKEQ--------E-------------------PNKFIDIVKAIA-PTFGG 131 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCC--------S-------------------HHHHHHHHHHTG-GGCSE
T ss_pred ccccCHHHHHHHHHHHHhCCCC---CeeeeeecC--------C-------------------HHHHHHHHHHhC-ccCcE
Confidence 97 8999999999999999999 999999992 1 588888888766 55 67
Q ss_pred eeeecCCCCcHHHHHHHHcC--CCceeecCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHh
Q 007112 305 IQFEDFANHNAFELLSKYSS--SHLVFNDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSK 382 (617)
Q Consensus 305 IqfEDf~~~~Af~lL~ryr~--~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~ 382 (617)
||||||..||||++|++|++ ++||||||+||||.+.++|+++|++..|++++++|+||+|||+||.+|+.+|...
T Consensus 132 invED~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~~--- 208 (439)
T 2dvm_A 132 INLEDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTEA--- 208 (439)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHHT---
T ss_pred EEEEeCCCchHHHHHHHHHHhcCEEEEeCCCcEEeehHHHHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHHc---
Confidence 99999999999999999996 6999999999999999999999999999999999999999999999999999763
Q ss_pred ccCCCHHhhcCeEEEEc----cCCcccCCcccC---CchhchhhhcccC---CCCCHHHHHhccCCcEEEeecCCC-CCC
Q 007112 383 QTKAPIEEARKKIWLVD----SKGLIVSSRKES---LQHFKKPWAHEHA---PIKSLLDAVKAIKPTMLMGTSGVG-KTF 451 (617)
Q Consensus 383 ~~G~s~eeAr~~i~lvD----~~GLi~~~R~~~---L~~~k~~fA~~~~---~~~~L~eaV~~vkPtvLIG~S~~~-g~F 451 (617)
|+++ ++||++| ++||++++ +. |.+++++|++... ...+|.|+++. +|+|||+|+.+ |+|
T Consensus 209 --G~~~----~~I~vvd~~~~R~G~~~~a--~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~--aDVlInaT~~~~G~~ 278 (439)
T 2dvm_A 209 --GVKP----ENVRVVELVNGKPRILTSD--LDLEKLFPYRGWLLKKTNGENIEGGPQEALKD--ADVLISFTRPGPGVI 278 (439)
T ss_dssp --TCCG----GGEEEEEEETTEEEECCTT--SCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTT--CSEEEECSCCCSSSS
T ss_pred --CCCc----CeEEEEEccCCCcCccccc--cchhHHHHHHHHHhhccccccccccHHHHhcc--CCEEEEcCCCccCCC
Confidence 8753 7899999 99999887 24 7888889987533 25689999987 89999999985 899
Q ss_pred CHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCcceeCCeeeccCCCCcccccchhhHHHHH
Q 007112 452 TKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLII 531 (617)
Q Consensus 452 teevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wT~GraifASGSPF~pv~~~Gk~~~p~Q~NN~yiFPGiglG~l~ 531 (617)
++++++.|+ ++||||+||||+ +||++++|.+| |++++||| +++.|+|+||+|+|||||+|+++
T Consensus 279 ~~e~v~~m~---~~~iVfDLynP~--~t~~~~~A~~~--G~~ivatG----------~~ml~~Q~nn~~~FPGi~~g~l~ 341 (439)
T 2dvm_A 279 KPQWIEKMN---EDAIVFPLANPV--PEILPEEAKKA--GARIVATG----------RSDYPNQINNLLGFPGIFRGALD 341 (439)
T ss_dssp CHHHHTTSC---TTCEEEECCSSS--CSSCHHHHHHH--TCSEECBS----------CSSSSSBCCGGGTHHHHHHHHHH
T ss_pred ChHHHHhcC---CCCEEEECCCCC--CcchHHHHHHc--CCeEEcCC----------CchhHHHHHHHhcccCchHHHHh
Confidence 999999885 899999999999 89999999998 89999999 58999999999999999999999
Q ss_pred hCCcccCHHHHHHHHHHHHhccCcccCCCCCccCCCCChhhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCccC
Q 007112 532 SGAIRVRDEMLLAASEALAAQVTQEHFDKGLIYPPFTNIRKISAHIAAKVAAKAYDLGLASRLPRPKDLVSYAESCMYSP 611 (617)
Q Consensus 532 s~a~~Itd~M~laAA~aLA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~GlA~~~~~p~dl~~~i~~~m~~P 611 (617)
++|++|||+|+++||++||++++++ ..+.|||++++ |+||.+||.||+++|+++|+|+..+.|+|+.+|+++.||.+
T Consensus 342 ~~a~~i~~~m~~aaa~ala~~~~~~--~~~~i~P~~~~-~~v~~~va~av~~~a~~~g~a~~~~~~~~~~~~~~~~~~~~ 418 (439)
T 2dvm_A 342 VRARTITDSMIIAAAKAIASIVEEP--SEENIIPSPLN-PIVYAREARAVAEEAMKEGVARTKVKGEWVEEHTIRLIEFY 418 (439)
T ss_dssp TTCSCCCHHHHHHHHHHHHHTSSSC--BTTBCSCCTTC-HHHHHHHHHHHHHHHHHHTCCSSCCCHHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHhhCccc--cCCccCCCccc-chhhHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHhhhh
Confidence 9999999999999999999999876 78999999999 99999999999999999999987777899999999999987
Q ss_pred CC
Q 007112 612 MY 613 (617)
Q Consensus 612 ~Y 613 (617)
.|
T Consensus 419 ~~ 420 (439)
T 2dvm_A 419 EN 420 (439)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 8
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.82 E-value=1.5e-08 Score=109.44 Aligned_cols=130 Identities=17% Similarity=0.208 Sum_probs=105.6
Q ss_pred CCCcee----------ecCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcC
Q 007112 324 SSHLVF----------NDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARK 393 (617)
Q Consensus 324 ~~~~~F----------NDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~ 393 (617)
..+|+| .|++.||+-+++.|++ +.++..|.+.+++|+|.|..|.++|+.+... |+
T Consensus 171 L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~---ratg~~L~GktVgIiG~G~IG~~vA~~Lka~-----Ga------- 235 (436)
T 3h9u_A 171 LTIPAMNVNDSVTKSKFDNLYGCRESLVDGIK---RATDVMIAGKTACVCGYGDVGKGCAAALRGF-----GA------- 235 (436)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCceEeechhhhhhhhhccccchHHHHHHHH---HhcCCcccCCEEEEEeeCHHHHHHHHHHHHC-----CC-------
Confidence 579999 8999999999999996 4579999999999999999999999998643 63
Q ss_pred eEEEEccCCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 007112 394 KIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 394 ~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS 472 (617)
+++++|++. .+...|. ......+|.|+++. .|++|.+++..++++++.++.|. +..||+-.|
T Consensus 236 ~Viv~D~~p------------~~a~~A~~~G~~~~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK---~gAIVINvg 298 (436)
T 3h9u_A 236 RVVVTEVDP------------INALQAAMEGYQVLLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMR---DDAIVCNIG 298 (436)
T ss_dssp EEEEECSCH------------HHHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCC---TTEEEEECS
T ss_pred EEEEECCCh------------hhhHHHHHhCCeecCHHHHHhh--CCEEEECCCCcCccCHHHHhhcC---CCcEEEEeC
Confidence 588888742 1111121 11223589999986 99999988888999999999995 789999999
Q ss_pred CCCCCCCCCHHHHhc
Q 007112 473 NPTSQSECTAEEAYT 487 (617)
Q Consensus 473 NPt~~aEct~edA~~ 487 (617)
++. .|+.++.+.+
T Consensus 299 Rg~--vEID~~~L~~ 311 (436)
T 3h9u_A 299 HFD--TEIQVAWLKA 311 (436)
T ss_dssp SSG--GGBCHHHHHH
T ss_pred CCC--CccCHHHHHh
Confidence 997 8999987765
No 9
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.79 E-value=4.9e-08 Score=105.45 Aligned_cols=169 Identities=9% Similarity=0.199 Sum_probs=125.1
Q ss_pred CCChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCCcHHHHH---------------------HHHc-------CCCcee
Q 007112 278 RATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFELL---------------------SKYS-------SSHLVF 329 (617)
Q Consensus 278 R~~g~eY~~fidefv~av~~~fGp~~lIqfEDf~~~~Af~lL---------------------~ryr-------~~~~~F 329 (617)
--+-|||...++..+.. ..++|+.+| |-+..=...+- .||+ -.+|+|
T Consensus 111 g~~~~ey~~~~~~~~~~--~~~~p~~il---DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi 185 (435)
T 3gvp_A 111 GESEDDFWWCIDRCVNV--EGWQPNMIL---DDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAM 185 (435)
T ss_dssp TCCHHHHHHHHHHHHCB--TTBCCSEEE---ESSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEE
T ss_pred CCCHHHHHHHHHHHHhc--cCCCCcEEE---ecchHHHHHHHHHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEE
Confidence 34677888888776642 346677665 44433222221 3343 269999
Q ss_pred ----------ecCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEc
Q 007112 330 ----------NDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVD 399 (617)
Q Consensus 330 ----------NDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD 399 (617)
.|++.||+-++++|+..+ ++..|.+.+++|+|+|..|.++|+.+.. .|. +++.+|
T Consensus 186 ~vnds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~GktV~ViG~G~IGk~vA~~Lra-----~Ga-------~Viv~D 250 (435)
T 3gvp_A 186 NVNDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGGKQVVVCGYGEVGKGCCAALKA-----MGS-------IVYVTE 250 (435)
T ss_dssp ECTTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEC
T ss_pred EecchhhhhhhhhhhhhHHHHHHHHHHh---hCceecCCEEEEEeeCHHHHHHHHHHHH-----CCC-------EEEEEe
Confidence 899999999999999755 7999999999999999999999998864 264 588888
Q ss_pred cCCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCC
Q 007112 400 SKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQS 478 (617)
Q Consensus 400 ~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~a 478 (617)
.+.. +...|. ..-...+|.|+++. .|++|.+++..++++++.++.|. +..||+-.+++. .
T Consensus 251 ~dp~------------ra~~A~~~G~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK---~gailINvgrg~--~ 311 (435)
T 3gvp_A 251 IDPI------------CALQACMDGFRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMK---NSCIVCNMGHSN--T 311 (435)
T ss_dssp SCHH------------HHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSC---TTEEEEECSSTT--T
T ss_pred CChh------------hhHHHHHcCCEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcC---CCcEEEEecCCC--c
Confidence 7521 111121 11123579999986 99999999888999999999996 778999999997 8
Q ss_pred CCCHHHH
Q 007112 479 ECTAEEA 485 (617)
Q Consensus 479 Ect~edA 485 (617)
|+..+..
T Consensus 312 EId~~~L 318 (435)
T 3gvp_A 312 EIDVASL 318 (435)
T ss_dssp TBTGGGG
T ss_pred cCCHHHH
Confidence 8887665
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.16 E-value=7.8e-07 Score=94.53 Aligned_cols=218 Identities=20% Similarity=0.266 Sum_probs=128.1
Q ss_pred ccccHHHHHhcCCCCCeeEEEEecCceeecCCCCCCC--cccchhhhHHHHhhhcCCCCCceeeEEeecCCCccccccCc
Q 007112 192 EKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLSLYTALGGLRPSACLPITIDVGTNNEQLLNDE 269 (617)
Q Consensus 192 d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp 269 (617)
++..++++.++ ..+|+|.++++..+|++|.+.. |+.|..+ ..+|. | +++|.+.+ |
T Consensus 26 tP~~v~~L~~~----G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk~--------p 82 (401)
T 1x13_A 26 TPKTVEQLLKL----GFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVNA--------P 82 (401)
T ss_dssp CHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSSC--------C
T ss_pred CHHHHHHHHHC----CCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-C---------CeEEEeCC--------C
Confidence 34455656553 4689999999999999999865 8888877 56665 2 56776542 1
Q ss_pred ccccccccCCChhhHHHHHHHHHHHHHHhcCCCeeeeeecCC-CCcHHHHHHHHc-CCCceee-cCc------c----ch
Q 007112 270 FYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFA-NHNAFELLSKYS-SSHLVFN-DDI------Q----GT 336 (617)
Q Consensus 270 lYlG~r~~R~~g~eY~~fidefv~av~~~fGp~~lIqfEDf~-~~~Af~lL~ryr-~~~~~FN-DDi------Q----GT 336 (617)
..+.++.+++ ...+|.|=..+ ++. +++..+ ..+.+|+ +.+ | .+
T Consensus 83 ------------------~~~~i~~l~~---~~~li~~~~~~~d~~---~~~al~~~gI~v~~~e~v~~~~~a~~l~~l~ 138 (401)
T 1x13_A 83 ------------------LDDEIALLNP---GTTLVSFIWPAQNPE---LMQKLAERNVTVMAMDSVPRISRAQSLDALS 138 (401)
T ss_dssp ------------------CHHHHTTCCT---TCEEEECCCGGGCHH---HHHHHHHTTCEEEEGGGCCCSGGGGGGCHHH
T ss_pred ------------------CHHHHHHhcC---CCcEEEEecCCCCHH---HHHHHHHCCCEEEEeehhhhhhhhcccchHH
Confidence 1233333321 11223222221 222 333332 4666663 222 2 45
Q ss_pred hHHHHHHHHHHHHH----hCC----------CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 337 ASVVLAGILSALKL----VGG----------TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 337 aaV~LAgll~Alr~----~g~----------~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
....+|| .+|++. .++ .+.+.+|+|+|+|.+|.++++++.. .|. +++++|++.
T Consensus 139 ~~a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~v~D~~~ 205 (401)
T 1x13_A 139 SMANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANS-----LGA-------IVRAFDTRP 205 (401)
T ss_dssp HHHHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCG
T ss_pred HHHHHHH-HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEcCCH
Confidence 5556665 333333 222 2568999999999999999988754 262 588899864
Q ss_pred cccCCcccCCch------------hchhhhcccCC------CCCHHHHHhccCCcEEEeecCCC-----CCCCHHHHHHH
Q 007112 403 LIVSSRKESLQH------------FKKPWAHEHAP------IKSLLDAVKAIKPTMLMGTSGVG-----KTFTKEVVEAM 459 (617)
Q Consensus 403 Li~~~R~~~L~~------------~k~~fA~~~~~------~~~L~eaV~~vkPtvLIG~S~~~-----g~Fteevv~~M 459 (617)
-..... ..+.. .+..|++...+ ..+|.+.++. .|++|++...+ .++|++.++.|
T Consensus 206 ~~~~~~-~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~~m 282 (401)
T 1x13_A 206 EVKEQV-QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVDSM 282 (401)
T ss_dssp GGHHHH-HHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHHTS
T ss_pred HHHHHH-HHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcC
Confidence 321100 00100 00012211000 0147788876 89999996443 67899999999
Q ss_pred HcCCCCcEEEecCCCC
Q 007112 460 ASFNEKPVIFALSNPT 475 (617)
Q Consensus 460 a~~~erPIIFaLSNPt 475 (617)
. +..+|+-+|+|.
T Consensus 283 k---~g~vIVdva~~~ 295 (401)
T 1x13_A 283 K---AGSVIVDLAAQN 295 (401)
T ss_dssp C---TTCEEEETTGGG
T ss_pred C---CCcEEEEEcCCC
Confidence 6 778999999873
No 11
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.83 E-value=0.0001 Score=80.27 Aligned_cols=129 Identities=16% Similarity=0.191 Sum_probs=98.5
Q ss_pred CCCcee----------ecCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcC
Q 007112 324 SSHLVF----------NDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARK 393 (617)
Q Consensus 324 ~~~~~F----------NDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~ 393 (617)
-.+|+| .|+..||+-.++.|+. |.+|..|.+.+++|+|.|..|.++|+.+... |+
T Consensus 207 L~~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~GKTVgVIG~G~IGr~vA~~lraf-----Ga------- 271 (464)
T 3n58_A 207 LPFPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAGKVAVVCGYGDVGKGSAQSLAGA-----GA------- 271 (464)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccCCEEEEECcCHHHHHHHHHHHHC-----CC-------
Confidence 379999 5778999999888885 6679999999999999999999999988542 63
Q ss_pred eEEEEccCCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 007112 394 KIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 394 ~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS 472 (617)
+++.+|.+.. ....|. ..-...+|.|+++. .|+++-+++..++++++.++.|. +..||.-.+
T Consensus 272 ~Viv~d~dp~------------~a~~A~~~G~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK---~GAILINvG 334 (464)
T 3n58_A 272 RVKVTEVDPI------------CALQAAMDGFEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMK---DMCIVGNIG 334 (464)
T ss_dssp EEEEECSSHH------------HHHHHHHTTCEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSC---TTEEEEECS
T ss_pred EEEEEeCCcc------------hhhHHHhcCceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCC---CCeEEEEcC
Confidence 5888876321 111111 11123579999986 99999998888899999999996 788888888
Q ss_pred CCCCCCCCCHHHHh
Q 007112 473 NPTSQSECTAEEAY 486 (617)
Q Consensus 473 NPt~~aEct~edA~ 486 (617)
+.. .|+..+...
T Consensus 335 Rgd--vEID~~aL~ 346 (464)
T 3n58_A 335 HFD--NEIQVAALR 346 (464)
T ss_dssp SST--TTBTCGGGT
T ss_pred CCC--cccCHHHHH
Confidence 876 666655443
No 12
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.75 E-value=6.6e-05 Score=82.29 Aligned_cols=132 Identities=14% Similarity=0.212 Sum_probs=100.1
Q ss_pred CCCcee----------ecCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcC
Q 007112 324 SSHLVF----------NDDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARK 393 (617)
Q Consensus 324 ~~~~~F----------NDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~ 393 (617)
-.+|+| .|++.||+-.++.|+. |.++..|.+.+++|.|+|..|.+||+.+.. .|.
T Consensus 225 L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa-----~GA------- 289 (488)
T 3ond_A 225 LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAGKVAVVAGYGDVGKGCAAALKQ-----AGA------- 289 (488)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------
T ss_pred CCCceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccCCEEEEECCCHHHHHHHHHHHH-----CCC-------
Confidence 379999 6889999999999886 789999999999999999888888887764 362
Q ss_pred eEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007112 394 KIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN 473 (617)
Q Consensus 394 ~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 473 (617)
+++++|++.. + ... .+...-...++.++++. .|+++-.++..++++.+.++.|. +..||+-.++
T Consensus 290 ~Viv~D~~~~----~---a~~----Aa~~g~dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk---~gaiVvNaG~ 353 (488)
T 3ond_A 290 RVIVTEIDPI----C---ALQ----ATMEGLQVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMK---NNAIVCNIGH 353 (488)
T ss_dssp EEEEECSCHH----H---HHH----HHHTTCEECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSC---TTEEEEESSS
T ss_pred EEEEEcCCHH----H---HHH----HHHhCCccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcC---CCeEEEEcCC
Confidence 6888887521 1 111 01111123456676665 89999999888999999998885 7889999999
Q ss_pred CCCCCCCCHHHHhcc
Q 007112 474 PTSQSECTAEEAYTW 488 (617)
Q Consensus 474 Pt~~aEct~edA~~w 488 (617)
+. .|...++.-.|
T Consensus 354 ~~--~Ei~~~~l~~~ 366 (488)
T 3ond_A 354 FD--NEIDMLGLETH 366 (488)
T ss_dssp TT--TTBTHHHHHTS
T ss_pred CC--cccchHHHHHh
Confidence 85 78888776555
No 13
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.13 E-value=0.00057 Score=73.39 Aligned_cols=110 Identities=16% Similarity=0.191 Sum_probs=72.1
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCc--------------hhchhh
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ--------------HFKKPW 419 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~--------------~~k~~f 419 (617)
.+...|++|+|+|.+|.++|+++... |. +++++|++.-..+...+ +- .-+..|
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~y 253 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRL-----GA-------VVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGY 253 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSTTHHHHHHH-TTCEECCCCC------------
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEcCCHHHHHHHHH-cCCceeecccccccccccccch
Confidence 36789999999999999999988643 62 68999998532111000 10 001124
Q ss_pred hcccCC------CCCHHHHHhccCCcEEEeecCC-----CCCCCHHHHHHHHcCCCCcEEEecCC-CCCCCCCC
Q 007112 420 AHEHAP------IKSLLDAVKAIKPTMLMGTSGV-----GKTFTKEVVEAMASFNEKPVIFALSN-PTSQSECT 481 (617)
Q Consensus 420 A~~~~~------~~~L~eaV~~vkPtvLIG~S~~-----~g~Fteevv~~Ma~~~erPIIFaLSN-Pt~~aEct 481 (617)
++...+ ..+|.|+++. .|++|++... +.+||+|+++.|. +..+|+-+|- |-...|+|
T Consensus 254 a~e~s~~~~~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk---~GsVIVDvA~d~GG~~e~t 322 (405)
T 4dio_A 254 AKEMSGEYQVKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMK---PGSVVVDLAVERGGNIEGA 322 (405)
T ss_dssp -----CHHHHHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSC---TTCEEEETTGGGTCSBTTC
T ss_pred hhhcchhhhhhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCC---CCCEEEEEeCCCCCCcccc
Confidence 432111 2478999987 9999998543 3579999999996 8899999995 33445555
No 14
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.11 E-value=0.0052 Score=64.48 Aligned_cols=225 Identities=15% Similarity=0.152 Sum_probs=119.3
Q ss_pred cccHHHHHhcCCCCCeeEEEEecCceeecCCCCCCC--cccchhhhHHHHhhhcCCCCCceeeEEeecCCC-----cccc
Q 007112 193 KGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLSLYTALGGLRPSACLPITIDVGTN-----NEQL 265 (617)
Q Consensus 193 ~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTn-----Ne~L 265 (617)
+..++++.+ .+.+|+|.++++.-.|+.|.... |..|..++-.++ ++.| |+|.+.+- +++.
T Consensus 20 P~~v~~L~~----~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~ad------iil~v~~p~~~~~~~~~ 86 (384)
T 1l7d_A 20 PEVVKKLVG----LGFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQAD------VVWKVQRPMTAEEGTDE 86 (384)
T ss_dssp HHHHHHHHH----TTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSCS------EEEEEECCCCGGGSCCG
T ss_pred HHHHHHHHh----CCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCCC------EEEEecCcccccCCHHH
Confidence 344555554 35789999999999999997754 777777766555 3333 66665432 1111
Q ss_pred ---c-cCcccccccccCCChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCCcHHHHHHHHcCCCceeecCccchhHHHH
Q 007112 266 ---L-NDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSSSHLVFNDDIQGTASVVL 341 (617)
Q Consensus 266 ---L-~DplYlG~r~~R~~g~eY~~fidefv~av~~~fGp~~lIqfEDf~~~~Af~lL~ryr~~~~~FNDDiQGTaaV~L 341 (617)
+ ..-.+++.-+.-. + .+.++++.+ -|- .++.+|-.....+- ..+++|+ ....+
T Consensus 87 i~~l~~~~~~i~~~~~~~-----~---~~~~~~~~~-~gi-~~~~~e~~~~~~~~-------~~l~~l~------~~a~~ 143 (384)
T 1l7d_A 87 VALIKEGAVLMCHLGALT-----N---RPVVEALTK-RKI-TAYAMELMPRISRA-------QSMDILS------SQSNL 143 (384)
T ss_dssp GGGSCTTCEEEEECCGGG-----C---HHHHHHHHH-TTC-EEEEGGGCCCSGGG-------GGGCHHH------HHHHH
T ss_pred HHhhccCCEEEEEecccC-----C---HHHHHHHHH-CCC-EEEEeccccccccc-------cccchhh------HHHHH
Confidence 1 1122333333211 1 111222222 111 12233222110000 0111111 11122
Q ss_pred H---HHHHHHHHhCC----------CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCc
Q 007112 342 A---GILSALKLVGG----------TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSR 408 (617)
Q Consensus 342 A---gll~Alr~~g~----------~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R 408 (617)
| +++.+.+..++ .+.+.+++|+|+|.+|.++++.+.. .|. +++.+|++.- |
T Consensus 144 ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~~~d~~~~----~ 207 (384)
T 1l7d_A 144 AGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKR-----LGA-------VVMATDVRAA----T 207 (384)
T ss_dssp HHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCST----T
T ss_pred HHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCCHH----H
Confidence 3 45556665553 5788999999999999999987754 362 4889998632 1
Q ss_pred ccCCchhc-----------------hhhhcccC------CCCCHHHHHhccCCcEEEeec---C--CCCCCCHHHHHHHH
Q 007112 409 KESLQHFK-----------------KPWAHEHA------PIKSLLDAVKAIKPTMLMGTS---G--VGKTFTKEVVEAMA 460 (617)
Q Consensus 409 ~~~L~~~k-----------------~~fA~~~~------~~~~L~eaV~~vkPtvLIG~S---~--~~g~Fteevv~~Ma 460 (617)
.+.+...- -.|++... ....|.+.++. .|++|.++ + .+.+++++.++.|.
T Consensus 208 ~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~mk 285 (384)
T 1l7d_A 208 KEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTKMK 285 (384)
T ss_dssp HHHHHHTTCEECCC-----------------------CCHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTTSC
T ss_pred HHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC
Confidence 11010000 01111100 00127777775 99999988 3 23468999999995
Q ss_pred cCCCCcEEEecCCC
Q 007112 461 SFNEKPVIFALSNP 474 (617)
Q Consensus 461 ~~~erPIIFaLSNP 474 (617)
+..+|+-+|-+
T Consensus 286 ---~g~vivdva~~ 296 (384)
T 1l7d_A 286 ---PGSVIIDLAVE 296 (384)
T ss_dssp ---TTCEEEETTGG
T ss_pred ---CCCEEEEEecC
Confidence 67789988864
No 15
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.80 E-value=0.0017 Score=69.12 Aligned_cols=100 Identities=22% Similarity=0.222 Sum_probs=67.5
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchh-------------chhhhc
Q 007112 355 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHF-------------KKPWAH 421 (617)
Q Consensus 355 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~-------------k~~fA~ 421 (617)
+...|++|+|+|.+|..+|+.+... |. +++++|++.-.. +.+... ...|++
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l----~~~~~lGa~~~~l~~~~~~~~gya~ 245 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRL-----GA-------KTTGYDVRPEVA----EQVRSVGAQWLDLGIDAAGEGGYAR 245 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHH-----TC-------EEEEECSSGGGH----HHHHHTTCEECCCC-----------
T ss_pred cCCCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHH----HHHHHcCCeEEeccccccccccchh
Confidence 5789999999999999999988653 63 588999874211 101110 011221
Q ss_pred cc------CCCCCHHHHHhccCCcEEEeecCCC-----CCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007112 422 EH------APIKSLLDAVKAIKPTMLMGTSGVG-----KTFTKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 422 ~~------~~~~~L~eaV~~vkPtvLIG~S~~~-----g~Fteevv~~Ma~~~erPIIFaLSNPt 475 (617)
.. ....+|.++++. .|++|++...+ .+||+++++.|. +..+|+-+|=+.
T Consensus 246 ~~~~~~~~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mk---pGsVIVDvA~d~ 305 (381)
T 3p2y_A 246 ELSEAERAQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQ---PGSVVVDLAGET 305 (381)
T ss_dssp --CHHHHHHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSC---TTCEEEETTGGG
T ss_pred hhhHHHHhhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCC---CCcEEEEEeCCC
Confidence 10 112368899986 99999975333 579999999996 788999998654
No 16
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.45 E-value=0.03 Score=60.54 Aligned_cols=178 Identities=19% Similarity=0.190 Sum_probs=126.2
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCCcHH-H-HHHHHc---CCC--cee----------ecCccchhHHHH
Q 007112 279 ATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAF-E-LLSKYS---SSH--LVF----------NDDIQGTASVVL 341 (617)
Q Consensus 279 ~~g~eY~~fidefv~av~~~fGp~~lIqfEDf~~~~Af-~-lL~ryr---~~~--~~F----------NDDiQGTaaV~L 341 (617)
.+..|-..|...|++++.+.-||+.-|-=+|++..-.. . +.+.|+ ... .++ .|--.-||-=+.
T Consensus 126 ~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv~ 205 (424)
T 3k92_A 126 MSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGVT 205 (424)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHHH
Confidence 45567778899999999999999888888999874222 2 445664 211 122 233455888888
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhc-hhhh
Q 007112 342 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFK-KPWA 420 (617)
Q Consensus 342 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k-~~fA 420 (617)
.++-.+++..|.+|++.||+|-|.|..|...|+++.+. |. +-+-+.|++|-|++.. .|+... +.+.
T Consensus 206 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~--GlD~~~l~~~~ 272 (424)
T 3k92_A 206 ICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPD--GLDIPYLLDKR 272 (424)
T ss_dssp HHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTT--CCCHHHHHHHC
T ss_pred HHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHH
Confidence 88899999999999999999999999999999999764 53 4467999999999754 343321 1111
Q ss_pred cccC-------CCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007112 421 HEHA-------PIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 475 (617)
Q Consensus 421 ~~~~-------~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 475 (617)
.... ..-+-.+ +-.++.||||=+..+ +..|++-++.+ .-.+|.--+| |+
T Consensus 273 ~~~g~i~~~~a~~~~~~~-i~~~~~DIliPcA~~-n~I~~~~a~~l----~ak~V~EgAN~p~ 329 (424)
T 3k92_A 273 DSFGMVTNLFTDVITNEE-LLEKDCDILVPAAIS-NQITAKNAHNI----QASIVVERANGPT 329 (424)
T ss_dssp CSSSCCGGGCSCCBCHHH-HHHSCCSEEEECSCS-SCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred HHhCCCCCCCcEEecCcc-ceeccccEEeecCcc-cccChhhHhhc----CceEEEcCCCCCC
Confidence 1111 1112233 445789999987775 79999988876 5788888888 65
No 17
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.35 E-value=0.03 Score=56.35 Aligned_cols=122 Identities=17% Similarity=0.195 Sum_probs=80.9
Q ss_pred chhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCch
Q 007112 335 GTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH 414 (617)
Q Consensus 335 GTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~ 414 (617)
.+-+|+=.++..++...|..+.+.+++|+|+|..|..+|+.+.. .|+ +++.+|+.. .+ +..
T Consensus 133 ~~~svae~a~~~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~-----~G~-------~V~~~dr~~----~~---~~~ 193 (293)
T 3d4o_A 133 NSIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFAA-----LGA-------KVKVGARES----DL---LAR 193 (293)
T ss_dssp HHHHHHHHHHHHHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSH----HH---HHH
T ss_pred ccHhHHHHHHHHHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHh-----CCC-------EEEEEECCH----HH---HHH
Confidence 44455555565666777889999999999999999999998754 252 688888752 11 111
Q ss_pred hchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecC-CCCCCCCCCHHHH
Q 007112 415 FKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALS-NPTSQSECTAEEA 485 (617)
Q Consensus 415 ~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS-NPt~~aEct~edA 485 (617)
.+ .+--......+|.++++. .|++|-... .+.++++.++.|. +..+|+=+| +|. ++..+.|
T Consensus 194 ~~-~~g~~~~~~~~l~~~l~~--aDvVi~~~p-~~~i~~~~l~~mk---~~~~lin~ar~~~---~~~~~~a 255 (293)
T 3d4o_A 194 IA-EMGMEPFHISKAAQELRD--VDVCINTIP-ALVVTANVLAEMP---SHTFVIDLASKPG---GTDFRYA 255 (293)
T ss_dssp HH-HTTSEEEEGGGHHHHTTT--CSEEEECCS-SCCBCHHHHHHSC---TTCEEEECSSTTC---SBCHHHH
T ss_pred HH-HCCCeecChhhHHHHhcC--CCEEEECCC-hHHhCHHHHHhcC---CCCEEEEecCCCC---CCCHHHH
Confidence 10 010000012468888875 999997654 5799999999885 567888888 443 3455444
No 18
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.07 E-value=0.074 Score=57.36 Aligned_cols=186 Identities=15% Similarity=0.147 Sum_probs=126.6
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCCcHH--HHHHHHcC---CC--cee----------ecCccchhHHHH
Q 007112 279 ATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAF--ELLSKYSS---SH--LVF----------NDDIQGTASVVL 341 (617)
Q Consensus 279 ~~g~eY~~fidefv~av~~~fGp~~lIqfEDf~~~~Af--~lL~ryr~---~~--~~F----------NDDiQGTaaV~L 341 (617)
.+..|-..|...|++++.+.-||+.-|-=+|++..-.. -+.+.|+. .. .++ .+.-.-||-=+.
T Consensus 123 ~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 202 (419)
T 3aoe_E 123 LSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGAL 202 (419)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHH
Confidence 45567788899999999999999999999999875321 24556631 11 122 222344666666
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEE-EEccCCcccCCcccCCchhc-hhh
Q 007112 342 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIW-LVDSKGLIVSSRKESLQHFK-KPW 419 (617)
Q Consensus 342 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~-lvD~~GLi~~~R~~~L~~~k-~~f 419 (617)
-++-.+++..|.+|++.||+|-|.|..|...|++|.+ .| -+++ +.|++|-|++.. .|+..+ +.+
T Consensus 203 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~-----~G-------akVVavsD~~G~i~dp~--Gld~~~l~~~ 268 (419)
T 3aoe_E 203 LVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAER-----LG-------MRVVAVATSMGGMYAPE--GLDVAEVLSA 268 (419)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEEETTEEEECTT--CCCHHHHHHH
T ss_pred HHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CC-------CEEEEEEcCCCeEECCC--CCCHHHHHHH
Confidence 7788888999999999999999999999999998865 25 3466 999999998764 343221 111
Q ss_pred hcccCCCC----CHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CCCCCCCCHHHHhc
Q 007112 420 AHEHAPIK----SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PTSQSECTAEEAYT 487 (617)
Q Consensus 420 A~~~~~~~----~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt~~aEct~edA~~ 487 (617)
......+. +- +-+-.++.|||+=++. ++..|++-.+.+ .-.||.--+| |++ +| +++.+.
T Consensus 269 ~~~~g~v~~~~~~~-~e~~~~~~DVliP~A~-~n~i~~~~A~~l----~ak~V~EgAN~p~t-~~--A~~~L~ 332 (419)
T 3aoe_E 269 YEATGSLPRLDLAP-EEVFGLEAEVLVLAAR-EGALDGDRARQV----QAQAVVEVANFGLN-PE--AEAYLL 332 (419)
T ss_dssp HHHHSSCSCCCBCT-TTGGGSSCSEEEECSC-TTCBCHHHHTTC----CCSEEEECSTTCBC-HH--HHHHHH
T ss_pred HHhhCCcceeeccc-hhhhccCceEEEeccc-ccccccchHhhC----CceEEEECCCCcCC-HH--HHHHHH
Confidence 11111010 00 1234578999998765 679999988877 5679999998 653 33 344443
No 19
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.06 E-value=0.32 Score=52.96 Aligned_cols=183 Identities=16% Similarity=0.100 Sum_probs=125.8
Q ss_pred CCChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCCcH-----HHHHHHHcCC-Ccee----------ecCccchhHHHH
Q 007112 278 RATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNA-----FELLSKYSSS-HLVF----------NDDIQGTASVVL 341 (617)
Q Consensus 278 R~~g~eY~~fidefv~av~~~fGp~~lIqfEDf~~~~A-----f~lL~ryr~~-~~~F----------NDDiQGTaaV~L 341 (617)
..+..|-..|...||..+.+..||+.=|--.|++..-. +...++++.. -+|| .+.-.-||-=+.
T Consensus 140 ~~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv~ 219 (450)
T 4fcc_A 140 GKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLV 219 (450)
T ss_dssp TCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeHH
Confidence 35667888999999999999999999999999975432 2333444432 2233 123334777777
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc
Q 007112 342 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH 421 (617)
Q Consensus 342 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~ 421 (617)
-++-.+++..|.+|++.||+|=|.|..|...|+.|.+. |. +=+-+-|++|-|++.. .++..+.....
T Consensus 220 ~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~i~d~~--Gid~e~l~~l~ 286 (450)
T 4fcc_A 220 YFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEF-----GA------RVITASDSSGTVVDES--GFTKEKLARLI 286 (450)
T ss_dssp HHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEEETTEEEECTT--CCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhc-----CC------eEEEEecCCceEEeCC--CCCHHHHHHHH
Confidence 88888999999999999999999999999999998753 63 4566778999888653 35443322111
Q ss_pred c--cCCCCCHHHH-------------HhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007112 422 E--HAPIKSLLDA-------------VKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 475 (617)
Q Consensus 422 ~--~~~~~~L~ea-------------V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 475 (617)
+ ......+.+. +-.++.|||+=+..+ +..|++-++.+.+. .-.+|.-=+| |+
T Consensus 287 e~k~~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl~-~~I~~~~a~~L~a~-g~k~IaEgAN~p~ 354 (450)
T 4fcc_A 287 EIKSSRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQ-NELDVDAAHQLIAN-GVKAVAEGANMPT 354 (450)
T ss_dssp HHHTSTTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSCT-TCBCHHHHHHHHHT-TCCEEECCSSSCB
T ss_pred HHhcccCCccccccccCCcEEecCcccccCCccEEeecccc-ccccHHHHHHHHhc-CceEEecCCCCCC
Confidence 1 0111122221 234689999988775 69999999998532 2357777777 55
No 20
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.97 E-value=0.015 Score=60.21 Aligned_cols=96 Identities=16% Similarity=0.210 Sum_probs=77.6
Q ss_pred chhHHHHHHHHHHHHHhCCCCCCceEEEeCcC-hHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCc
Q 007112 335 GTASVVLAGILSALKLVGGTLADQTFLFLGAG-EAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ 413 (617)
Q Consensus 335 GTaaV~LAgll~Alr~~g~~l~d~riv~~GAG-sAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~ 413 (617)
+-.-+|-.|++-.++..+.+++..++|++|+| ..|.-+|.++... | ..+.+++++
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 198 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-----N-------ATVTTCHSK------------ 198 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT------------
T ss_pred CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEECC------------
Confidence 44567888999999999999999999999999 5799999888652 4 358888743
Q ss_pred hhchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 007112 414 HFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNP 474 (617)
Q Consensus 414 ~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNP 474 (617)
..+|.+.++. .|++|+..+.++.+|+++|+ +.-+|+=++-|
T Consensus 199 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 239 (301)
T 1a4i_A 199 ------------TAHLDEEVNK--GDILVVATGQPEMVKGEWIK------PGAIVIDCGIN 239 (301)
T ss_dssp ------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCCB
T ss_pred ------------cccHHHHhcc--CCEEEECCCCcccCCHHHcC------CCcEEEEccCC
Confidence 2468899987 99999999999999999874 44566666644
No 21
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=95.85 E-value=0.021 Score=57.95 Aligned_cols=88 Identities=16% Similarity=0.225 Sum_probs=60.3
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhh
Q 007112 341 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA 420 (617)
Q Consensus 341 LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA 420 (617)
-.|++.+++..+.++++.+++|+|||.+|.+++..+.. .|. ++|+++|+. .++ .....+.+.
T Consensus 111 ~~G~~~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~-----~G~------~~v~i~~R~----~~~---a~~la~~~~ 172 (283)
T 3jyo_A 111 VSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVT-----HGV------QKLQVADLD----TSR---AQALADVIN 172 (283)
T ss_dssp HHHHHHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSS----HHH---HHHHHHHHH
T ss_pred HHHHHHHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEECC----HHH---HHHHHHHHH
Confidence 46888999988889999999999999777777666654 364 679998875 222 122222222
Q ss_pred cc-------cCCCCCHHHHHhccCCcEEEeecCCC
Q 007112 421 HE-------HAPIKSLLDAVKAIKPTMLMGTSGVG 448 (617)
Q Consensus 421 ~~-------~~~~~~L~eaV~~vkPtvLIG~S~~~ 448 (617)
.. ..+..+|.++++. +|++|-++..|
T Consensus 173 ~~~~~~~i~~~~~~~l~~~l~~--~DiVInaTp~G 205 (283)
T 3jyo_A 173 NAVGREAVVGVDARGIEDVIAA--ADGVVNATPMG 205 (283)
T ss_dssp HHHTSCCEEEECSTTHHHHHHH--SSEEEECSSTT
T ss_pred hhcCCceEEEcCHHHHHHHHhc--CCEEEECCCCC
Confidence 11 1123478888887 89999887765
No 22
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.83 E-value=0.022 Score=58.70 Aligned_cols=84 Identities=19% Similarity=0.245 Sum_probs=69.3
Q ss_pred hhHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCch
Q 007112 336 TASVVLAGILSALKLVGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH 414 (617)
Q Consensus 336 TaaV~LAgll~Alr~~g~~l~d~riv~~GAGs-Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~ 414 (617)
-.-+|-.|++-.++..+.+|++.++|++|+|. .|..+|.++... |. .+.+++++
T Consensus 140 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~hs~------------- 194 (285)
T 3l07_A 140 LESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-----KA-------TVTTCHRF------------- 194 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC-------------
Confidence 34577888999999999999999999999987 899999988652 52 47777653
Q ss_pred hchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHH
Q 007112 415 FKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVE 457 (617)
Q Consensus 415 ~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~ 457 (617)
..+|.+.++. +|++|...+.++.++.|+|+
T Consensus 195 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 224 (285)
T 3l07_A 195 -----------TTDLKSHTTK--ADILIVAVGKPNFITADMVK 224 (285)
T ss_dssp -----------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC
T ss_pred -----------chhHHHhccc--CCEEEECCCCCCCCCHHHcC
Confidence 1368899987 99999999999999998873
No 23
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.49 E-value=0.035 Score=57.17 Aligned_cols=92 Identities=16% Similarity=0.255 Sum_probs=74.3
Q ss_pred hhHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCch
Q 007112 336 TASVVLAGILSALKLVGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH 414 (617)
Q Consensus 336 TaaV~LAgll~Alr~~g~~l~d~riv~~GAGs-Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~ 414 (617)
-.-+|-.|++..++..+.+|++.++|++|+|. .|..+|.++... |. .+.+++++
T Consensus 139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~-----gA-------tVtv~h~~------------- 193 (285)
T 3p2o_A 139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-----GA-------TVSVCHIK------------- 193 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------------
Confidence 45678889999999999999999999999976 899999998652 52 47788753
Q ss_pred hchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEec
Q 007112 415 FKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFAL 471 (617)
Q Consensus 415 ~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaL 471 (617)
..+|.+.++. +|++|...+.++.++.|+|+ +.-+|+=+
T Consensus 194 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDV 231 (285)
T 3p2o_A 194 -----------TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK------EGVIVVDV 231 (285)
T ss_dssp -----------CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC------TTEEEEEC
T ss_pred -----------chhHHHHhhc--CCEEEECCCCCCcCCHHHcC------CCeEEEEe
Confidence 1368899987 99999999999999998873 34455554
No 24
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=95.45 E-value=0.49 Score=51.65 Aligned_cols=190 Identities=18% Similarity=0.172 Sum_probs=128.0
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCCcHHH--HHHHHc---CCCc-ee----------ecCccchhHHHHH
Q 007112 279 ATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFE--LLSKYS---SSHL-VF----------NDDIQGTASVVLA 342 (617)
Q Consensus 279 ~~g~eY~~fidefv~av~~~fGp~~lIqfEDf~~~~Af~--lL~ryr---~~~~-~F----------NDDiQGTaaV~LA 342 (617)
.+..|...|-..||..+.+-+||..=|-=+|++..-... +.+.|+ .... |+ ..--.-||-=+.-
T Consensus 145 ~s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~ 224 (456)
T 3r3j_A 145 KSENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVY 224 (456)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHH
Confidence 456677888888999998888999999999998743221 445554 2221 11 1122346666777
Q ss_pred HHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchh----
Q 007112 343 GILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKP---- 418 (617)
Q Consensus 343 gll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~---- 418 (617)
++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=+.+.|++|-|++.. .|+..+..
T Consensus 225 ~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~iyd~~--Gld~~~l~~~~~ 291 (456)
T 3r3j_A 225 FAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEK-----GA------IVLTMSDSNGYILEPN--GFTKEQLNYIMD 291 (456)
T ss_dssp HHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHH-----TC------CBCCEECSSCEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHHH
Confidence 7788888889999999999999999999999998764 53 3345889999888653 34332211
Q ss_pred -----------hhcccCCCC--CHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CCCCCCCCHHH
Q 007112 419 -----------WAHEHAPIK--SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PTSQSECTAEE 484 (617)
Q Consensus 419 -----------fA~~~~~~~--~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt~~aEct~ed 484 (617)
|+...+... +- +.+-.++.||||=+.. ++..|++-++.+.+ +.-+||.--+| |++ +| +++
T Consensus 292 ~k~~~~~~v~~~~~~~~~a~~v~~-~~i~~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~T-~e--A~~ 365 (456)
T 3r3j_A 292 IKNNQRLRLKEYLKYSKTAKYFEN-QKPWNIPCDIAFPCAT-QNEINENDADLFIQ-NKCKMIVEGANMPTH-IK--ALH 365 (456)
T ss_dssp HHHTSCCCGGGGGGTCSSCEEECS-CCGGGSCCSEEEECSC-TTCBCHHHHHHHHH-HTCCEEECCSSSCBC-TT--HHH
T ss_pred HHHhcCcchhhhhhcCCCceEeCC-ccccccCccEEEeCCC-ccchhhHHHHHHHh-cCCeEEEecCCCCCC-HH--HHH
Confidence 211001100 00 1133568999998877 57999999999843 25689999998 653 44 556
Q ss_pred Hhc
Q 007112 485 AYT 487 (617)
Q Consensus 485 A~~ 487 (617)
.+.
T Consensus 366 iL~ 368 (456)
T 3r3j_A 366 KLK 368 (456)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 25
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.43 E-value=0.034 Score=57.04 Aligned_cols=82 Identities=11% Similarity=0.199 Sum_probs=68.0
Q ss_pred chhHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCc
Q 007112 335 GTASVVLAGILSALKLVGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ 413 (617)
Q Consensus 335 GTaaV~LAgll~Alr~~g~~l~d~riv~~GAGs-Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~ 413 (617)
+-.-+|-.|++..++..+ |++.++|++|+|. .|..+|.++... | -.+.+++++
T Consensus 130 ~~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~-----g-------AtVtv~~~~------------ 183 (276)
T 3ngx_A 130 FLVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNR-----N-------YTVSVCHSK------------ 183 (276)
T ss_dssp SSCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT------------
T ss_pred CCCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHC-----C-------CeEEEEeCC------------
Confidence 345678889999999999 9999999999985 899999998652 5 257788753
Q ss_pred hhchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHH
Q 007112 414 HFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVV 456 (617)
Q Consensus 414 ~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv 456 (617)
..+|.+.++. +|++|...+.++.++++++
T Consensus 184 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~v 212 (276)
T 3ngx_A 184 ------------TKDIGSMTRS--SKIVVVAVGRPGFLNREMV 212 (276)
T ss_dssp ------------CSCHHHHHHH--SSEEEECSSCTTCBCGGGC
T ss_pred ------------cccHHHhhcc--CCEEEECCCCCccccHhhc
Confidence 1468899998 9999999999999998876
No 26
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.31 E-value=0.033 Score=57.44 Aligned_cols=96 Identities=14% Similarity=0.144 Sum_probs=76.1
Q ss_pred chhHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCc
Q 007112 335 GTASVVLAGILSALKLVGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ 413 (617)
Q Consensus 335 GTaaV~LAgll~Alr~~g~~l~d~riv~~GAGs-Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~ 413 (617)
+-.-+|-.|++-.++..+.+++..++|++|+|. .|.-+|.++... | ..+.+++++
T Consensus 137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 192 (288)
T 1b0a_A 137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLA-----G-------CTTTVTHRF------------ 192 (288)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTT-----T-------CEEEEECSS------------
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHC-----C-------CeEEEEeCC------------
Confidence 456778889999999999999999999999995 699998887642 4 358888643
Q ss_pred hhchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 007112 414 HFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNP 474 (617)
Q Consensus 414 ~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNP 474 (617)
..+|.+.++. +|++|+..+.++.+|+++|+ +.-+|+=++-|
T Consensus 193 ------------t~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk------~GavVIDVgi~ 233 (288)
T 1b0a_A 193 ------------TKNLRHHVEN--ADLLIVAVGKPGFIPGDWIK------EGAIVIDVGIN 233 (288)
T ss_dssp ------------CSCHHHHHHH--CSEEEECSCCTTCBCTTTSC------TTCEEEECCCE
T ss_pred ------------chhHHHHhcc--CCEEEECCCCcCcCCHHHcC------CCcEEEEccCC
Confidence 1468899987 99999999999999998873 33455555543
No 27
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.28 E-value=0.073 Score=53.31 Aligned_cols=121 Identities=13% Similarity=0.193 Sum_probs=75.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhcc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI 436 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 436 (617)
..||.|+|+|..|.++|..+... |.+ ..+++++|++ .++ +...++.| ......++.|+++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~-----g~~----~~~V~v~dr~----~~~---~~~l~~~~--gi~~~~~~~~~~~~- 63 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN-----GYD----PNRICVTNRS----LDK---LDFFKEKC--GVHTTQDNRQGALN- 63 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT-----TCC----GGGEEEECSS----SHH---HHHHHHTT--CCEEESCHHHHHSS-
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-----CCC----CCeEEEEeCC----HHH---HHHHHHHc--CCEEeCChHHHHhc-
Confidence 46899999999999999988753 643 2468888874 111 22222222 11113578899986
Q ss_pred CCcEEEeecCCCCCCCHHHHHHHHcC--CCCcEEEecCCCCCCCCCCHHHHhccccC--cEEEeeCCCCCccee
Q 007112 437 KPTMLMGTSGVGKTFTKEVVEAMASF--NEKPVIFALSNPTSQSECTAEEAYTWSKG--QAIFASGSPFDPVEY 506 (617)
Q Consensus 437 kPtvLIG~S~~~g~Fteevv~~Ma~~--~erPIIFaLSNPt~~aEct~edA~~wT~G--raifASGSPF~pv~~ 506 (617)
+|++| ++..+ -..+++++.+..+ .++.+|...++..+ .++.-+|... +++- .-|+.|...
T Consensus 64 -aDvVi-lav~p-~~~~~vl~~l~~~~l~~~~iiiS~~agi~-----~~~l~~~l~~~~~vvr--~mPn~p~~v 127 (280)
T 3tri_A 64 -ADVVV-LAVKP-HQIKMVCEELKDILSETKILVISLAVGVT-----TPLIEKWLGKASRIVR--AMPNTPSSV 127 (280)
T ss_dssp -CSEEE-ECSCG-GGHHHHHHHHHHHHHTTTCEEEECCTTCC-----HHHHHHHHTCCSSEEE--EECCGGGGG
T ss_pred -CCeEE-EEeCH-HHHHHHHHHHHhhccCCCeEEEEecCCCC-----HHHHHHHcCCCCeEEE--EecCChHHh
Confidence 88877 44444 4568888888764 56668888888774 3444444432 3332 246555544
No 28
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.26 E-value=0.045 Score=56.42 Aligned_cols=96 Identities=18% Similarity=0.253 Sum_probs=74.7
Q ss_pred hhHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCch
Q 007112 336 TASVVLAGILSALKLVGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH 414 (617)
Q Consensus 336 TaaV~LAgll~Alr~~g~~l~d~riv~~GAGs-Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~ 414 (617)
-.-+|-.|++..++..+.+|++.++|++|+|. .|..+|.++... |. .+.+++++
T Consensus 140 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~-----gA-------tVtv~hs~------------- 194 (286)
T 4a5o_A 140 LRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLG-----GC-------TVTVTHRF------------- 194 (286)
T ss_dssp SCCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHT-----TC-------EEEEECTT-------------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC-------------
Confidence 34577889999999999999999999999875 899999998652 42 47777642
Q ss_pred hchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEec-CCCC
Q 007112 415 FKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFAL-SNPT 475 (617)
Q Consensus 415 ~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaL-SNPt 475 (617)
..+|.+.++. +|++|+..+.++.++.|+|+ +.-+|+=+ +||.
T Consensus 195 -----------T~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvgi~~~ 237 (286)
T 4a5o_A 195 -----------TRDLADHVSR--ADLVVVAAGKPGLVKGEWIK------EGAIVIDVGINRQ 237 (286)
T ss_dssp -----------CSCHHHHHHT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCSCSS
T ss_pred -----------CcCHHHHhcc--CCEEEECCCCCCCCCHHHcC------CCeEEEEeccccc
Confidence 1368899987 99999999999999998873 34455544 3554
No 29
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=95.21 E-value=0.18 Score=54.46 Aligned_cols=179 Identities=13% Similarity=0.175 Sum_probs=111.6
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCCcHH--HHHHHHc---CCC---ceee----------cCccchhHHH
Q 007112 279 ATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAF--ELLSKYS---SSH---LVFN----------DDIQGTASVV 340 (617)
Q Consensus 279 ~~g~eY~~fidefv~av~~~fGp~~lIqfEDf~~~~Af--~lL~ryr---~~~---~~FN----------DDiQGTaaV~ 340 (617)
.+..|-..|...|++++.+.-||+.-|-=+|++..-.. -+.+.|+ ... .++. +.-.-||-=+
T Consensus 116 ~s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv 195 (421)
T 2yfq_A 116 LSERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGV 195 (421)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHH
Confidence 34567778899999999999999999999999975221 2455664 221 2221 2223466666
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC-----CcccCCcccCCchh
Q 007112 341 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK-----GLIVSSRKESLQHF 415 (617)
Q Consensus 341 LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~-----GLi~~~R~~~L~~~ 415 (617)
.-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .|. +=+-+.|++ |-|++.. .|+..
T Consensus 196 ~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~-----~Ga------kvVavsD~~~~~~~G~i~d~~--Gld~~ 262 (421)
T 2yfq_A 196 AVVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIER-----QGG------KVCAIAEWDRNEGNYALYNEN--GIDFK 262 (421)
T ss_dssp HHHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHH-----TTC------CEEECCBCCSSSCSBCCBCSS--CCCHH
T ss_pred HHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CCC------EEEEEEecCCCccceEEECCC--CCCHH
Confidence 66777888889999999999999999999999998865 363 334489999 9999764 34322
Q ss_pred ch-hhhcccCCCCC------H-HHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007112 416 KK-PWAHEHAPIKS------L-LDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 475 (617)
Q Consensus 416 k~-~fA~~~~~~~~------L-~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 475 (617)
.. .+......+.. + .+.+-.++.||||=++. ++..|++-.+.+ .-.+|.-=+| |+
T Consensus 263 ~l~~~~~~~g~i~~~~~a~~i~~~~~~~~~~DIliP~A~-~n~i~~~~A~~l----~ak~VvEgAN~P~ 326 (421)
T 2yfq_A 263 ELLAYKEANKTLIGFPGAERITDEEFWTKEYDIIVPAAL-ENVITGERAKTI----NAKLVCEAANGPT 326 (421)
T ss_dssp HHHHHHHHHCC---------------------CEEECSC-SSCSCHHHHTTC----CCSEEECCSSSCS
T ss_pred HHHHHHHhcCCcccCCCceEeCccchhcCCccEEEEcCC-cCcCCcccHHHc----CCeEEEeCCcccc
Confidence 11 11111111100 0 01233457788886654 557777777666 4566666666 54
No 30
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.13 E-value=0.28 Score=53.22 Aligned_cols=176 Identities=15% Similarity=0.164 Sum_probs=121.6
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCCcHHH---HHHHHcC---C--Ccee----------ecCccchhHHH
Q 007112 279 ATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFE---LLSKYSS---S--HLVF----------NDDIQGTASVV 340 (617)
Q Consensus 279 ~~g~eY~~fidefv~av~~~fGp~~lIqfEDf~~~~Af~---lL~ryr~---~--~~~F----------NDDiQGTaaV~ 340 (617)
.+..|-..|...|++++.+.-||+.-|-=+|++.. ..+ +.+.|+. . -.++ .+.-.-||-=+
T Consensus 140 ~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~-~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv 218 (440)
T 3aog_A 140 LSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTG-EREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGV 218 (440)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCC-HHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHH
Confidence 45567788899999999999999999999999874 322 4556631 1 1222 22234466666
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEE-EEccCCcccCCcccCCchhc-hh
Q 007112 341 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIW-LVDSKGLIVSSRKESLQHFK-KP 418 (617)
Q Consensus 341 LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~-lvD~~GLi~~~R~~~L~~~k-~~ 418 (617)
.-++-.+++..|.+|++.||+|.|.|..|...|++|.+. | -+++ +.|++|-|++... |+... +.
T Consensus 219 ~~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~-----G-------akvVavsD~~G~i~dp~G--ld~~~l~~ 284 (440)
T 3aog_A 219 FITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDH-----G-------ARVVAVQDHTGTVYNEAG--IDPYDLLR 284 (440)
T ss_dssp HHHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEECSSCEEECTTC--CCHHHHHH
T ss_pred HHHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHC-----C-------CEEEEEEcCCcEEECCCC--CCHHHHHH
Confidence 667778888999999999999999999999999988653 5 3444 9999999987642 32221 11
Q ss_pred hhcccCC--------CCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007112 419 WAHEHAP--------IKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 475 (617)
Q Consensus 419 fA~~~~~--------~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 475 (617)
+...... .-+-.+ +-.++.||||=++. ++..|++-++.+ .-.+|.--+| |+
T Consensus 285 ~~~~~g~i~~y~~a~~i~~~e-i~~~~~DIlvPcA~-~n~i~~~na~~l----~ak~VvEgAN~p~ 344 (440)
T 3aog_A 285 HVQEFGGVRGYPKAEPLPAAD-FWGLPVEFLVPAAL-EKQITEQNAWRI----RARIVAEGANGPT 344 (440)
T ss_dssp HHHHTSSSTTCTTSEECCHHH-HTTCCCSEEEECSS-SSCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred HHHhcCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccchhhHHHc----CCcEEEecCcccc
Confidence 1111100 012334 45678999998766 568888888777 5678888888 65
No 31
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=95.01 E-value=0.049 Score=56.41 Aligned_cols=96 Identities=19% Similarity=0.276 Sum_probs=74.9
Q ss_pred ccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccC
Q 007112 333 IQGTASVVLAGILSALKLVGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKES 411 (617)
Q Consensus 333 iQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGs-Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~ 411 (617)
..|-.-+|-.|++..++..+.+|++.++|++|+|. .|..+|.++... |. .+.+++++ |
T Consensus 141 ~~~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~~~~---T------ 199 (300)
T 4a26_A 141 EPPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKE-----NA-------TVTIVHSG---T------ 199 (300)
T ss_dssp CCSCCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT---S------
T ss_pred cCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC---C------
Confidence 34445678889999999999999999999999876 899999998752 52 48888762 1
Q ss_pred CchhchhhhcccCCCCCHH--HHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 007112 412 LQHFKKPWAHEHAPIKSLL--DAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 412 L~~~k~~fA~~~~~~~~L~--eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS 472 (617)
.+|. +.++. .|++|...+.++.++.++++ +.-+|+=++
T Consensus 200 ---------------~~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 239 (300)
T 4a26_A 200 ---------------STEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK------EGAAVVDVG 239 (300)
T ss_dssp ---------------CHHHHHHHHHT--CSEEEECSCCTTCBCGGGSC------TTCEEEECC
T ss_pred ---------------CCchhhhhhcc--CCEEEECCCCCCCCcHHhcC------CCcEEEEEe
Confidence 1344 88987 99999999999999998873 344555443
No 32
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=94.92 E-value=0.03 Score=58.45 Aligned_cols=114 Identities=18% Similarity=0.253 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHH---------hCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCC
Q 007112 338 SVVLAGILSALKL---------VGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSS 407 (617)
Q Consensus 338 aV~LAgll~Alr~---------~g~~l~d~riv~~GAGs-Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~ 407 (617)
.+|-.|.+-.++- .|.++...++|++|+|. .|.-+|.++... | .+++++|++..-...
T Consensus 149 PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~-----g-------AtVtv~nR~~~~l~~ 216 (320)
T 1edz_A 149 PCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLAND-----G-------ATVYSVDVNNIQKFT 216 (320)
T ss_dssp CHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTT-----S-------CEEEEECSSEEEEEE
T ss_pred CCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHC-----C-------CEEEEEeCchHHHHh
Confidence 3444555666666 68899999999999996 598888888542 4 358999987655555
Q ss_pred cccCCchhchhhhcccCC---C--CCHHHHHhccCCcEEEeecCCCCC-CCHHHHHHHHcCCCCcEEEecCCCC
Q 007112 408 RKESLQHFKKPWAHEHAP---I--KSLLDAVKAIKPTMLMGTSGVGKT-FTKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 408 R~~~L~~~k~~fA~~~~~---~--~~L~eaV~~vkPtvLIG~S~~~g~-Fteevv~~Ma~~~erPIIFaLSNPt 475 (617)
|.+.+... +|.... . .+|.++++. .|++|+..+.++. +|.++|+ +.=+|+-++.|-
T Consensus 217 ra~~la~~----~~~~t~~~~t~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk------~GavVIDVgi~r 278 (320)
T 1edz_A 217 RGESLKLN----KHHVEDLGEYSEDLLKKCSLD--SDVVITGVPSENYKFPTEYIK------EGAVCINFACTK 278 (320)
T ss_dssp SCCCSSCC----CCEEEEEEECCHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSC------TTEEEEECSSSC
T ss_pred HHHHHhhh----cccccccccccHhHHHHHhcc--CCEEEECCCCCcceeCHHHcC------CCeEEEEcCCCc
Confidence 54333311 121100 1 479999998 9999999999887 8988873 234555565553
No 33
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=94.89 E-value=0.32 Score=53.23 Aligned_cols=178 Identities=17% Similarity=0.185 Sum_probs=119.8
Q ss_pred ChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCCcHH--HHHHHHcC---C-Ccee----------ecCccchhHHHHHH
Q 007112 280 TGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAF--ELLSKYSS---S-HLVF----------NDDIQGTASVVLAG 343 (617)
Q Consensus 280 ~g~eY~~fidefv~av~~~fGp~~lIqfEDf~~~~Af--~lL~ryr~---~-~~~F----------NDDiQGTaaV~LAg 343 (617)
+..|...|-..||..+.+..||..=|-=+|++..-.. -+.+.|+. . ..|+ .++-.-||-=+.-+
T Consensus 159 S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~ 238 (470)
T 2bma_A 159 SDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYF 238 (470)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHH
Confidence 4566778888899999988899988899999874221 14455542 1 0111 11223466666667
Q ss_pred HHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEE-EEccCCcccCCcccCCchh-------
Q 007112 344 ILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIW-LVDSKGLIVSSRKESLQHF------- 415 (617)
Q Consensus 344 ll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~-lvD~~GLi~~~R~~~L~~~------- 415 (617)
+-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +++ +.|++|-|++.. .++..
T Consensus 239 ~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~G~i~dp~--Gid~edl~~l~~ 304 (470)
T 2bma_A 239 VLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHL-----NV-------KVLTLSDSNGYVYEPN--GFTHENLEFLID 304 (470)
T ss_dssp HHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHT-----TC-------EECEEEETTEEEECSS--CCCHHHHHHHHH
T ss_pred HHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEEeCCceEECCC--CCCHHHHHHHHH
Confidence 778888899999999999999999999999998653 52 444 888888887653 34222
Q ss_pred -c-------hhhhccc---CCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007112 416 -K-------KPWAHEH---APIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 475 (617)
Q Consensus 416 -k-------~~fA~~~---~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 475 (617)
| ..|+... +.... .+. -.++.||||=+.. ++..|++-++.+-+ |.-.+|.--+| |+
T Consensus 305 ~k~~~~g~v~~~~~~~~~a~~v~~-~~~-~~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~ 372 (470)
T 2bma_A 305 LKEEKKGRIKEYLNHSSTAKYFPN-EKP-WGVPCTLAFPCAT-QNDVDLDQAKLLQK-NGCILVGEGANMPS 372 (470)
T ss_dssp HHTTTTCCGGGGGGTCSSCEECSS-CCT-TSSCCSEEEECSS-TTCBCSHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHHhcCCcHHHHHhhcCCcEEecC-cCe-eecCccEEEeccc-cCcCCHHHHHHHHh-cCcEEEEeCCCCCC
Confidence 1 1222110 00110 122 2578999998875 67999999999854 45679998898 55
No 34
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=94.88 E-value=0.045 Score=56.68 Aligned_cols=91 Identities=23% Similarity=0.297 Sum_probs=57.7
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhh
Q 007112 341 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA 420 (617)
Q Consensus 341 LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA 420 (617)
-.|++.+++..|.++++.++||+|||.+|.+||..+.. .|. ++|+++++.+ .+.+........+.
T Consensus 138 ~~Gf~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~~----~~~~~a~~la~~~~ 202 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRKD----DFYANAEKTVEKIN 202 (315)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECSS----TTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCccCCEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECCC----chHHHHHHHHHHhh
Confidence 46788888888999999999999999777777766654 364 6899998852 11111111111221
Q ss_pred cc------cCCC---CCHHHHHhccCCcEEEeecCCC
Q 007112 421 HE------HAPI---KSLLDAVKAIKPTMLMGTSGVG 448 (617)
Q Consensus 421 ~~------~~~~---~~L~eaV~~vkPtvLIG~S~~~ 448 (617)
.. ..+. ..|.++++. +|++|-++..|
T Consensus 203 ~~~~~~~~~~~~~~~~~l~~~l~~--aDiIINaTp~G 237 (315)
T 3tnl_A 203 SKTDCKAQLFDIEDHEQLRKEIAE--SVIFTNATGVG 237 (315)
T ss_dssp HHSSCEEEEEETTCHHHHHHHHHT--CSEEEECSSTT
T ss_pred hhcCCceEEeccchHHHHHhhhcC--CCEEEECccCC
Confidence 10 0112 235666765 89999777655
No 35
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=94.81 E-value=0.054 Score=56.00 Aligned_cols=90 Identities=27% Similarity=0.346 Sum_probs=58.2
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc
Q 007112 342 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH 421 (617)
Q Consensus 342 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~ 421 (617)
.|++.+++..|.++++.++|++|||.+|.+|+..|.. .|. ++|+++++. ..+.+......+.+..
T Consensus 133 ~Gf~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt----~~~~~~a~~la~~~~~ 197 (312)
T 3t4e_A 133 TGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK----DDFFEKAVAFAKRVNE 197 (312)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS----STHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC----CchHHHHHHHHHHhhh
Confidence 5778888888999999999999999887777777654 364 689999885 2221112221122211
Q ss_pred c------cCCCCCH---HHHHhccCCcEEEeecCCC
Q 007112 422 E------HAPIKSL---LDAVKAIKPTMLMGTSGVG 448 (617)
Q Consensus 422 ~------~~~~~~L---~eaV~~vkPtvLIG~S~~~ 448 (617)
. ..+..++ .+.++. .|++|-++..|
T Consensus 198 ~~~~~v~~~~~~~l~~~~~~l~~--~DiIINaTp~G 231 (312)
T 3t4e_A 198 NTDCVVTVTDLADQHAFTEALAS--ADILTNGTKVG 231 (312)
T ss_dssp HSSCEEEEEETTCHHHHHHHHHH--CSEEEECSSTT
T ss_pred ccCcceEEechHhhhhhHhhccC--ceEEEECCcCC
Confidence 1 0122344 566766 89999877765
No 36
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=94.74 E-value=0.21 Score=52.68 Aligned_cols=102 Identities=18% Similarity=0.316 Sum_probs=63.3
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHH
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAV 433 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 433 (617)
++.+.+++|+|+|..|..++..+... |. ++|+++|+. ..| .....+.|--+.-...++.+.+
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~-----G~------~~V~v~~r~----~~r---a~~la~~~g~~~~~~~~l~~~l 225 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDR-----GV------RAVLVANRT----YER---AVELARDLGGEAVRFDELVDHL 225 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHH-----CC------SEEEEECSS----HHH---HHHHHHHHTCEECCGGGHHHHH
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHC-----CC------CEEEEEeCC----HHH---HHHHHHHcCCceecHHhHHHHh
Confidence 57899999999999999998887643 64 579988874 122 1111111211111224688888
Q ss_pred hccCCcEEEeecCCCC-CCCHHHHHH--HH-cCCCCcEEEecCCCC
Q 007112 434 KAIKPTMLMGTSGVGK-TFTKEVVEA--MA-SFNEKPVIFALSNPT 475 (617)
Q Consensus 434 ~~vkPtvLIG~S~~~g-~Fteevv~~--Ma-~~~erPIIFaLSNPt 475 (617)
+. .|++|=+++.+. .++++.++. |. +...+-+++-++.|.
T Consensus 226 ~~--aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~P~ 269 (404)
T 1gpj_A 226 AR--SDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPR 269 (404)
T ss_dssp HT--CSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred cC--CCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccCCC
Confidence 64 899998776553 467788887 43 222334555566543
No 37
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=94.74 E-value=0.036 Score=56.31 Aligned_cols=86 Identities=20% Similarity=0.238 Sum_probs=56.2
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhh
Q 007112 341 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA 420 (617)
Q Consensus 341 LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA 420 (617)
-.|++.+++..+.++++.+++|+|||.+|.+|+..|.. .|. +++++++++ .++.+.+.. .+.
T Consensus 101 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~----~~~a~~la~---~~~ 162 (277)
T 3don_A 101 GIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYK-----IVR------PTLTVANRT----MSRFNNWSL---NIN 162 (277)
T ss_dssp HHHHHHHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSC----GGGGTTCCS---CCE
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHHHHHHHH---hcc
Confidence 35677888888999999999999999888888777654 364 578888885 233222321 111
Q ss_pred cccCCCCCHHHHHhccCCcEEEeecCCC
Q 007112 421 HEHAPIKSLLDAVKAIKPTMLMGTSGVG 448 (617)
Q Consensus 421 ~~~~~~~~L~eaV~~vkPtvLIG~S~~~ 448 (617)
. ....++.++++. +|++|-++..|
T Consensus 163 ~--~~~~~~~~~~~~--aDiVInaTp~G 186 (277)
T 3don_A 163 K--INLSHAESHLDE--FDIIINTTPAG 186 (277)
T ss_dssp E--ECHHHHHHTGGG--CSEEEECCC--
T ss_pred c--ccHhhHHHHhcC--CCEEEECccCC
Confidence 0 112345566655 89999776654
No 38
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.70 E-value=0.069 Score=53.23 Aligned_cols=98 Identities=19% Similarity=0.263 Sum_probs=57.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchh-------hhcc--------
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKP-------WAHE-------- 422 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~-------fA~~-------- 422 (617)
+||.|+|+|..|.+||..++.+ |. +++++|++ .++ ++..+.. +...
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~----~~~---~~~~~~~i~~~~~~~~~~g~~~~~~~ 65 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDIN----TDA---LDAAKKRFEGLAAVYEKEVAGAADGA 65 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS----HHH---HHHHHHHHHHHHHHHHHHSTTCTTTH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCC----HHH---HHHHHHHHHHHHHHHHHhcccCCHHH
Confidence 6899999999999999998753 63 68888875 111 2111111 1000
Q ss_pred -------cCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCC
Q 007112 423 -------HAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQ 477 (617)
Q Consensus 423 -------~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~ 477 (617)
.....++.|+++. .|++|=+-...-...+++++.+.+....-.|+ .||-.+.
T Consensus 66 ~~~~~~~i~~~~~~~~~~~~--aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il-~s~tS~~ 124 (283)
T 4e12_A 66 AQKALGGIRYSDDLAQAVKD--ADLVIEAVPESLDLKRDIYTKLGELAPAKTIF-ATNSSTL 124 (283)
T ss_dssp HHHHHHHCEEESCHHHHTTT--CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEE-EECCSSS
T ss_pred HHHHHcCeEEeCCHHHHhcc--CCEEEEeccCcHHHHHHHHHHHHhhCCCCcEE-EECCCCC
Confidence 0123678888876 89888432211114566677776554444444 3454443
No 39
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=94.64 E-value=0.17 Score=55.46 Aligned_cols=123 Identities=15% Similarity=0.242 Sum_probs=87.5
Q ss_pred CccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccC
Q 007112 332 DIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKES 411 (617)
Q Consensus 332 DiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~ 411 (617)
.+.|+......|+ .+.+|..+.+.+++|+|.|..|.++|+.+... |+ +++.+|++.. +.
T Consensus 235 ~~~~~~~~l~~gw---~r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~Viv~d~~~~----~~-- 293 (479)
T 1v8b_A 235 NVYGCRHSLPDGL---MRATDFLISGKIVVICGYGDVGKGCASSMKGL-----GA-------RVYITEIDPI----CA-- 293 (479)
T ss_dssp HHHHHHHHHHHHH---HHHHCCCCTTSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSCHH----HH--
T ss_pred chHhHHHHHhhhh---hhccccccCCCEEEEEeeCHHHHHHHHHHHhC-----cC-------EEEEEeCChh----hH--
Confidence 3445555555662 25678899999999999999999999998653 53 6888887521 00
Q ss_pred CchhchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhc
Q 007112 412 LQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYT 487 (617)
Q Consensus 412 L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~ 487 (617)
+. .+...-...+|.|+++. .|++|.+....++++++.++.|. +.-||.=.+.-. .|+.-++..+
T Consensus 294 ~~-----a~~~g~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gailiNvgrg~--~EId~~aL~~ 357 (479)
T 1v8b_A 294 IQ-----AVMEGFNVVTLDEIVDK--GDFFITCTGNVDVIKLEHLLKMK---NNAVVGNIGHFD--DEIQVNELFN 357 (479)
T ss_dssp HH-----HHTTTCEECCHHHHTTT--CSEEEECCSSSSSBCHHHHTTCC---TTCEEEECSSTT--TSBCHHHHHT
T ss_pred HH-----HHHcCCEecCHHHHHhc--CCEEEECCChhhhcCHHHHhhcC---CCcEEEEeCCCC--ccccchhhhc
Confidence 01 11111123579999986 99999998888899999999885 567888777754 6677776665
No 40
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.61 E-value=0.02 Score=51.09 Aligned_cols=88 Identities=15% Similarity=0.194 Sum_probs=51.3
Q ss_pred chhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCch
Q 007112 335 GTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH 414 (617)
Q Consensus 335 GTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~ 414 (617)
|-.+|+.+++-.+-+.. +.+++|+|+|..|..++..+.. .|. + ++++|++ .++ ...
T Consensus 4 ~~~sv~~~a~~~~~~~~-----~~~v~iiG~G~iG~~~a~~l~~-----~g~------~-v~v~~r~----~~~---~~~ 59 (144)
T 3oj0_A 4 GKVSIPSIVYDIVRKNG-----GNKILLVGNGMLASEIAPYFSY-----PQY------K-VTVAGRN----IDH---VRA 59 (144)
T ss_dssp CCCSHHHHHHHHHHHHC-----CCEEEEECCSHHHHHHGGGCCT-----TTC------E-EEEEESC----HHH---HHH
T ss_pred CcccHHHHHHHHHHhcc-----CCEEEEECCCHHHHHHHHHHHh-----CCC------E-EEEEcCC----HHH---HHH
Confidence 34455555554333322 7899999999999888776643 242 3 8888874 211 222
Q ss_pred hchhhhcccCCCCCHHHHHhccCCcEEEeecCCC
Q 007112 415 FKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVG 448 (617)
Q Consensus 415 ~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~ 448 (617)
..+.|.-+.....++.++++. .|++|=+++.+
T Consensus 60 ~a~~~~~~~~~~~~~~~~~~~--~Divi~at~~~ 91 (144)
T 3oj0_A 60 FAEKYEYEYVLINDIDSLIKN--NDVIITATSSK 91 (144)
T ss_dssp HHHHHTCEEEECSCHHHHHHT--CSEEEECSCCS
T ss_pred HHHHhCCceEeecCHHHHhcC--CCEEEEeCCCC
Confidence 222221111234678888876 88888665543
No 41
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=94.25 E-value=0.043 Score=55.76 Aligned_cols=87 Identities=20% Similarity=0.255 Sum_probs=56.7
Q ss_pred HHHHHHHHHhC-CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhh
Q 007112 342 AGILSALKLVG-GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA 420 (617)
Q Consensus 342 Agll~Alr~~g-~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA 420 (617)
.|++.+++..| .+++..+++|+|||.+|..+|..|.. .|. ++++++|+. .++ .......+.
T Consensus 125 ~G~~~~l~~~~~~~l~~~~vlVlGaGg~g~aia~~L~~-----~G~------~~V~v~nR~----~~k---a~~la~~~~ 186 (297)
T 2egg_A 125 LGYVQALEEEMNITLDGKRILVIGAGGGARGIYFSLLS-----TAA------ERIDMANRT----VEK---AERLVREGD 186 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC------SEEEEECSS----HHH---HHHHHHHSC
T ss_pred HHHHHHHHHhCCCCCCCCEEEEECcHHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHH---HHHHHHHhh
Confidence 78888888877 78999999999999888888777654 364 579988875 222 111111121
Q ss_pred cccCCC---CCHHHHHhccCCcEEEeecCCC
Q 007112 421 HEHAPI---KSLLDAVKAIKPTMLMGTSGVG 448 (617)
Q Consensus 421 ~~~~~~---~~L~eaV~~vkPtvLIG~S~~~ 448 (617)
...... .++.++++. .|++|-+++.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~--aDivIn~t~~~ 215 (297)
T 2egg_A 187 ERRSAYFSLAEAETRLAE--YDIIINTTSVG 215 (297)
T ss_dssp SSSCCEECHHHHHHTGGG--CSEEEECSCTT
T ss_pred hccCceeeHHHHHhhhcc--CCEEEECCCCC
Confidence 100011 245566655 89999887765
No 42
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=94.16 E-value=0.3 Score=52.68 Aligned_cols=178 Identities=17% Similarity=0.187 Sum_probs=116.5
Q ss_pred CChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCCcHHH---HHHHHc---CC--CceeecC----------ccchhHHH
Q 007112 279 ATGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFE---LLSKYS---SS--HLVFNDD----------IQGTASVV 340 (617)
Q Consensus 279 ~~g~eY~~fidefv~av~~~fGp~~lIqfEDf~~~~Af~---lL~ryr---~~--~~~FNDD----------iQGTaaV~ 340 (617)
.+.+|-..|...|++++.+.-||..-|-=+|++.. +.+ +.+.|+ .. ..++.-+ -.-||-=+
T Consensus 115 ~s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~-~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv 193 (421)
T 1v9l_A 115 LSQRELEELSRGYARAIAPLIGDVVDIPAPDVGTN-AQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGV 193 (421)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCC-HHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-HHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHH
Confidence 34567788899999999999999999999999973 222 335553 11 1222221 12355555
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEE-EEccCCcccCCcccC---Cchhc
Q 007112 341 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIW-LVDSKGLIVSSRKES---LQHFK 416 (617)
Q Consensus 341 LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~-lvD~~GLi~~~R~~~---L~~~k 416 (617)
.-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .| -+++ +.|++|-|++...=+ +..++
T Consensus 194 ~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e-----~G-------akVVavsD~~G~i~dp~GlD~~~l~~~k 261 (421)
T 1v9l_A 194 AVATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEK-----MG-------AKVIAVSDINGVAYRKEGLNVELIQKNK 261 (421)
T ss_dssp HHHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEECSSCEEECTTCCCTHHHHHTT
T ss_pred HHHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----CC-------CEEEEEECCCcEEECCCCCCHHHHHHHH
Confidence 55677788889999999999999999999999988754 25 3455 899999998754211 22222
Q ss_pred hh--------hhccc--CCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007112 417 KP--------WAHEH--APIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 475 (617)
Q Consensus 417 ~~--------fA~~~--~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 475 (617)
.. |.... ..+.+-.| +-.++.|+|+=+.. ++..|++-++.+ .-.||.--+| |+
T Consensus 262 ~~~g~~~v~~y~~~~~~~~~~~~~~-~~~~~~Dil~P~A~-~~~I~~~~a~~l----~ak~V~EgAN~p~ 325 (421)
T 1v9l_A 262 GLTGPALVELFTTKDNAEFVKNPDA-IFKLDVDIFVPAAI-ENVIRGDNAGLV----KARLVVEGANGPT 325 (421)
T ss_dssp TSCHHHHHHHHHHTSCCCCCSSTTG-GGGCCCSEEEECSC-SSCBCTTTTTTC----CCSEEECCSSSCB
T ss_pred HhhCCccccccccccCceEeCCchh-hhcCCccEEEecCc-CCccchhhHHHc----CceEEEecCCCcC
Confidence 21 11000 11201122 34568899996664 668888777766 5678888888 55
No 43
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=94.11 E-value=1.2 Score=47.86 Aligned_cols=178 Identities=17% Similarity=0.177 Sum_probs=118.1
Q ss_pred ChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCCcH--HHHHHHHc---CC--Cceeec----------CccchhHHHHH
Q 007112 280 TGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNA--FELLSKYS---SS--HLVFND----------DIQGTASVVLA 342 (617)
Q Consensus 280 ~g~eY~~fidefv~av~~~fGp~~lIqfEDf~~~~A--f~lL~ryr---~~--~~~FND----------DiQGTaaV~LA 342 (617)
+.+|-..|...|++++.+.-||..-|-=+|++..-. --+.+.|+ .. ..++.- .-.-||-=+.-
T Consensus 115 s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~ 194 (415)
T 2tmg_A 115 SRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKV 194 (415)
T ss_dssp CHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHH
Confidence 455677889999999999989998899999987521 11344552 21 122322 12335555566
Q ss_pred HHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhc-hhhhc
Q 007112 343 GILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFK-KPWAH 421 (617)
Q Consensus 343 gll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k-~~fA~ 421 (617)
++-.+++..|.++++.||+|.|.|..|...|++|.+ + .|. +=+-+.|++|-+++.. .|+... +.+..
T Consensus 195 ~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e---~-~Ga------kvVavsD~~G~i~dp~--Gld~~~l~~~~~ 262 (415)
T 2tmg_A 195 CAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQ---E-LGS------KVVAVSDSRGGIYNPE--GFDVEELIRYKK 262 (415)
T ss_dssp HHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHH---T-TCC------EEEEEECSSCEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHH---h-cCC------EEEEEEeCCCeEECCC--CCCHHHHHHHHH
Confidence 677788889999999999999999999999998865 1 253 2334899999988764 243321 11211
Q ss_pred ccCCC--------CCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007112 422 EHAPI--------KSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 475 (617)
Q Consensus 422 ~~~~~--------~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 475 (617)
....+ -+-.| +-.++.|+||=+.. ++..|++-.+.+ .-.+|.--+| |+
T Consensus 263 ~~g~l~~y~~a~~~~~~e-il~~~~DIliP~A~-~n~i~~~~a~~l----~ak~V~EgAN~p~ 319 (415)
T 2tmg_A 263 EHGTVVTYPKGERITNEE-LLELDVDILVPAAL-EGAIHAGNAERI----KAKAVVEGANGPT 319 (415)
T ss_dssp HSSCSTTCSSSEEECHHH-HTTCSCSEEEECSS-TTSBCHHHHTTC----CCSEEECCSSSCB
T ss_pred hhCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccCcccHHHc----CCeEEEeCCCccc
Confidence 11110 12333 55678999997766 568888888776 5568887887 55
No 44
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=94.03 E-value=0.19 Score=53.07 Aligned_cols=162 Identities=19% Similarity=0.217 Sum_probs=104.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCCeeeeeecCCCCcHHH---HHHHHcC---CCcee---ecCccchhHHHHHHHHHHHHHhC
Q 007112 282 QEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFE---LLSKYSS---SHLVF---NDDIQGTASVVLAGILSALKLVG 352 (617)
Q Consensus 282 ~eY~~fidefv~av~~~fGp~~lIqfEDf~~~~Af~---lL~ryr~---~~~~F---NDDiQGTaaV~LAgll~Alr~~g 352 (617)
.+-++++..|.+++.+..|+ -|-=+|++.. ..+ +.+.|+. +-..+ .|--.-||-=+.-++-.+++..|
T Consensus 93 ~~~e~~~r~~~~~~~~l~g~--~ipa~D~gt~-~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G 169 (355)
T 1c1d_A 93 STWARILRIHAENIDKLSGN--YWTGPDVNTN-SADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHRG 169 (355)
T ss_dssp HHHHHHHHHHHHHHHHTTTS--EEEEECTTCC-HHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHHHhcCC--cccCCCCCCC-HHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 45567788888888887765 4688999763 332 5556651 11111 11112355556667777888889
Q ss_pred C-CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhccc-CCCCCHH
Q 007112 353 G-TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH-APIKSLL 430 (617)
Q Consensus 353 ~-~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~-~~~~~L~ 430 (617)
. +|++.+++|.|.|..|..+|+.+.. .|. ++++.|++ ..| ..|+... ...-++.
T Consensus 170 ~~~L~GktV~I~G~GnVG~~~A~~l~~-----~Ga-------kVvvsD~~----~~~--------~~~a~~~ga~~v~~~ 225 (355)
T 1c1d_A 170 LGSLDGLTVLVQGLGAVGGSLASLAAE-----AGA-------QLLVADTD----TER--------VAHAVALGHTAVALE 225 (355)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC----HHH--------HHHHHHTTCEECCGG
T ss_pred CCCCCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEeCC----ccH--------HHHHHhcCCEEeChH
Confidence 8 8999999999999999999988754 363 57788864 111 2222211 0111333
Q ss_pred HHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CCC
Q 007112 431 DAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PTS 476 (617)
Q Consensus 431 eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt~ 476 (617)
|.. .++.|+|+=+ +.++.++++-++.| +-.+|.--+| |+.
T Consensus 226 ell-~~~~DIliP~-A~~~~I~~~~~~~l----k~~iVie~AN~p~t 266 (355)
T 1c1d_A 226 DVL-STPCDVFAPC-AMGGVITTEVARTL----DCSVVAGAANNVIA 266 (355)
T ss_dssp GGG-GCCCSEEEEC-SCSCCBCHHHHHHC----CCSEECCSCTTCBC
T ss_pred Hhh-cCccceecHh-HHHhhcCHHHHhhC----CCCEEEECCCCCCC
Confidence 433 3578999954 55779999999999 3468888887 653
No 45
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=93.99 E-value=0.11 Score=53.31 Aligned_cols=98 Identities=14% Similarity=0.274 Sum_probs=75.4
Q ss_pred chhHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCc
Q 007112 335 GTASVVLAGILSALKLVGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ 413 (617)
Q Consensus 335 GTaaV~LAgll~Alr~~g~~l~d~riv~~GAGs-Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~ 413 (617)
+-.-+|-.|++-.++..|.+++..++|++|+|. .|.-+|.++.. .|. -..+++++++
T Consensus 136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~-----~g~-----~atVtv~h~~------------ 193 (281)
T 2c2x_A 136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTR-----RSE-----NATVTLCHTG------------ 193 (281)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTS-----TTT-----CCEEEEECTT------------
T ss_pred CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhc-----CCC-----CCEEEEEECc------------
Confidence 445677888999999999999999999999996 58888877743 210 1457777532
Q ss_pred hhchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 007112 414 HFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNP 474 (617)
Q Consensus 414 ~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNP 474 (617)
..+|.+.++. .|++|+..+.++.+|+|+|+ +.-+|+=++-|
T Consensus 194 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 234 (281)
T 2c2x_A 194 ------------TRDLPALTRQ--ADIVVAAVGVAHLLTADMVR------PGAAVIDVGVS 234 (281)
T ss_dssp ------------CSCHHHHHTT--CSEEEECSCCTTCBCGGGSC------TTCEEEECCEE
T ss_pred ------------hhHHHHHHhh--CCEEEECCCCCcccCHHHcC------CCcEEEEccCC
Confidence 1478999987 99999999999999999874 34566666655
No 46
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=93.94 E-value=0.088 Score=52.97 Aligned_cols=110 Identities=18% Similarity=0.189 Sum_probs=72.5
Q ss_pred HHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCC
Q 007112 348 LKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIK 427 (617)
Q Consensus 348 lr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~ 427 (617)
++..+..|.+.+++|+|+|..|..+|+.+.. .|+ +++.+|+.- .+ +...+..-++. ....
T Consensus 148 ~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~-----~G~-------~V~~~d~~~----~~---~~~~~~~g~~~-~~~~ 207 (300)
T 2rir_A 148 IQHTDYTIHGSQVAVLGLGRTGMTIARTFAA-----LGA-------NVKVGARSS----AH---LARITEMGLVP-FHTD 207 (300)
T ss_dssp HHTCSSCSTTSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSH----HH---HHHHHHTTCEE-EEGG
T ss_pred HHhcCCCCCCCEEEEEcccHHHHHHHHHHHH-----CCC-------EEEEEECCH----HH---HHHHHHCCCeE-Echh
Confidence 3456889999999999999999999998754 253 688888751 11 11111000010 0124
Q ss_pred CHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHH
Q 007112 428 SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEA 485 (617)
Q Consensus 428 ~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA 485 (617)
+|.|+++. .|++|-.... +.++++.++.|. +..+|+=+|.-. .+|..+.+
T Consensus 208 ~l~~~l~~--aDvVi~~~p~-~~i~~~~~~~mk---~g~~lin~a~g~--~~~~~~~a 257 (300)
T 2rir_A 208 ELKEHVKD--IDICINTIPS-MILNQTVLSSMT---PKTLILDLASRP--GGTDFKYA 257 (300)
T ss_dssp GHHHHSTT--CSEEEECCSS-CCBCHHHHTTSC---TTCEEEECSSTT--CSBCHHHH
T ss_pred hHHHHhhC--CCEEEECCCh-hhhCHHHHHhCC---CCCEEEEEeCCC--CCcCHHHH
Confidence 68888875 9999977664 799999888774 567888888632 34445444
No 47
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=93.84 E-value=0.11 Score=51.95 Aligned_cols=125 Identities=19% Similarity=0.349 Sum_probs=74.1
Q ss_pred HHHHHHHHHHhcC--------CCeeeeeecCCCCcHHHHHH--HHcCCCceeecCccchhHHHHHHHHHHHHHhCCCCCC
Q 007112 288 LQEFMTAVKQNYG--------EKVLIQFEDFANHNAFELLS--KYSSSHLVFNDDIQGTASVVLAGILSALKLVGGTLAD 357 (617)
Q Consensus 288 idefv~av~~~fG--------p~~lIqfEDf~~~~Af~lL~--ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~l~d 357 (617)
+++|++.++..|. -..++.+=|- ++.|..+=. ....+ .=+|-|- .|++.+++.. .+++
T Consensus 42 l~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~-~~~A~~iGAvNTi~~~-~G~NTD~--------~G~~~~l~~~--~~~~ 109 (253)
T 3u62_A 42 FDTEIRRILEEYDGFNATIPHKERVMRYVEP-SEDAQRIKAVNCVFRG-KGYNTDW--------VGVVKSLEGV--EVKE 109 (253)
T ss_dssp HHHHHHHHHHHCSEEEECTTCTTGGGGGSEE-CHHHHHHTCCCEEETT-EEECCHH--------HHHHHHTTTC--CCCS
T ss_pred HHHHHHHHhhCCCceeecCChHHHHHHHhCC-CHHHHHcCcceEeecC-EEEcchH--------HHHHHHHHhc--CCCC
Confidence 4666666664442 2234555565 666655410 00001 3455553 3677777654 5788
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 437 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 437 (617)
+++|+|||.+|.+++..|.. .|. ++|+++|+. .+|.+.|.. .|.. ....++.++++.
T Consensus 110 -~vliiGaGg~a~ai~~~L~~-----~G~------~~I~v~nR~----~~ka~~la~---~~~~--~~~~~~~~~~~~-- 166 (253)
T 3u62_A 110 -PVVVVGAGGAARAVIYALLQ-----MGV------KDIWVVNRT----IERAKALDF---PVKI--FSLDQLDEVVKK-- 166 (253)
T ss_dssp -SEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESC----HHHHHTCCS---SCEE--EEGGGHHHHHHT--
T ss_pred -eEEEECcHHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHHHHHHH---Hccc--CCHHHHHhhhcC--
Confidence 99999999999998887764 364 679999985 233222322 1110 123467888876
Q ss_pred CcEEEeecCC
Q 007112 438 PTMLMGTSGV 447 (617)
Q Consensus 438 PtvLIG~S~~ 447 (617)
+|++|-++..
T Consensus 167 aDiVInatp~ 176 (253)
T 3u62_A 167 AKSLFNTTSV 176 (253)
T ss_dssp CSEEEECSST
T ss_pred CCEEEECCCC
Confidence 8999976654
No 48
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.84 E-value=0.14 Score=53.13 Aligned_cols=96 Identities=21% Similarity=0.277 Sum_probs=63.7
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhccc----CCCCCHH
Q 007112 355 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH----APIKSLL 430 (617)
Q Consensus 355 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~----~~~~~L~ 430 (617)
++..+++|+|||.+|.+++..+.. .| | +++++|++ ..| +...+..++... ....++.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~-----~G-----a--~V~v~dr~----~~r---~~~~~~~~~~~~~~~~~~~~~~~ 225 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVG-----LG-----A--QVQIFDIN----VER---LSYLETLFGSRVELLYSNSAEIE 225 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH-----TT-----C--EEEEEESC----HHH---HHHHHHHHGGGSEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CC-----C--EEEEEeCC----HHH---HHHHHHhhCceeEeeeCCHHHHH
Confidence 667899999999999999888754 26 2 68888875 222 222222333210 1113566
Q ss_pred HHHhccCCcEEEeecCCCCC-----CCHHHHHHHHcCCCCcEEEecCCC
Q 007112 431 DAVKAIKPTMLMGTSGVGKT-----FTKEVVEAMASFNEKPVIFALSNP 474 (617)
Q Consensus 431 eaV~~vkPtvLIG~S~~~g~-----Fteevv~~Ma~~~erPIIFaLSNP 474 (617)
+.++. .|++|.+++.++. ++++.++.|. +.-+|+-++.+
T Consensus 226 ~~~~~--~DvVI~~~~~~~~~~~~li~~~~~~~~~---~g~~ivdv~~~ 269 (361)
T 1pjc_A 226 TAVAE--ADLLIGAVLVPGRRAPILVPASLVEQMR---TGSVIVDVAVD 269 (361)
T ss_dssp HHHHT--CSEEEECCCCTTSSCCCCBCHHHHTTSC---TTCEEEETTCT
T ss_pred HHHcC--CCEEEECCCcCCCCCCeecCHHHHhhCC---CCCEEEEEecC
Confidence 77764 8999999877653 5888888885 45577777754
No 49
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=93.61 E-value=0.12 Score=54.52 Aligned_cols=159 Identities=14% Similarity=0.152 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHHhcCCCeeeeeecCCCCcHHHHHHHHcCCC-ceeecC---------ccchhHHHHHHHHHHHHH-hCC
Q 007112 285 AELLQEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYSSSH-LVFNDD---------IQGTASVVLAGILSALKL-VGG 353 (617)
Q Consensus 285 ~~fidefv~av~~~fGp~~lIqfEDf~~~~Af~lL~ryr~~~-~~FNDD---------iQGTaaV~LAgll~Alr~-~g~ 353 (617)
++++..|.+++.+..|+ -|-=+|++..-. .+...-+++ ++---- ..-||-=+.-++..+++. .|.
T Consensus 93 ~~~~r~~~~~~~~l~g~--~i~A~D~Gt~~~--~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~ 168 (364)
T 1leh_A 93 EDMFRALGRFIQGLNGR--YITAEDVGTTVD--DMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGS 168 (364)
T ss_dssp HHHHHHHHHHHHTTTTS--EEBCBCTTCCHH--HHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHhcCc--eEEcccCCCCHH--HHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhccc
Confidence 45667777777777765 467788875332 333333333 211111 123444444455566666 476
Q ss_pred -CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHH
Q 007112 354 -TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDA 432 (617)
Q Consensus 354 -~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ea 432 (617)
+|++.+|+|.|+|..|..+|+.+.+. |. ++++.|++ . +.+..+...|- ...-++.+.
T Consensus 169 ~~L~GktV~V~G~G~VG~~~A~~L~~~-----Ga-------kVvv~D~~------~-~~l~~~a~~~g---a~~v~~~~l 226 (364)
T 1leh_A 169 DSLEGLAVSVQGLGNVAKALCKKLNTE-----GA-------KLVVTDVN------K-AAVSAAVAEEG---ADAVAPNAI 226 (364)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC------H-HHHHHHHHHHC---CEECCGGGT
T ss_pred cCCCcCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEcCC------H-HHHHHHHHHcC---CEEEChHHH
Confidence 89999999999999999999988653 63 47788853 1 11333333221 111122232
Q ss_pred HhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007112 433 VKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 475 (617)
Q Consensus 433 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 475 (617)
. ..+.|++|=+ +..++++++.++.| .-.+|.--+| |+
T Consensus 227 l-~~~~DIvip~-a~~~~I~~~~~~~l----g~~iV~e~An~p~ 264 (364)
T 1leh_A 227 Y-GVTCDIFAPC-ALGAVLNDFTIPQL----KAKVIAGSADNQL 264 (364)
T ss_dssp T-TCCCSEEEEC-SCSCCBSTTHHHHC----CCSEECCSCSCCB
T ss_pred h-ccCCcEeecc-chHHHhCHHHHHhC----CCcEEEeCCCCCc
Confidence 2 2578999955 45669999988888 3467776666 54
No 50
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.32 E-value=0.26 Score=50.73 Aligned_cols=123 Identities=15% Similarity=0.189 Sum_probs=70.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhch----h---hhcc-------
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKK----P---WAHE------- 422 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~----~---fA~~------- 422 (617)
-+||.|+|+|.-|.+||..++.+ |. +++++|.+- + .+...+. . ++..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~~----~---~~~~~~~~i~~~l~~l~~~G~~~g~~ 66 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIEP----R---QITGALENIRKEMKSLQQSGSLKGSL 66 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSCH----H---HHHHHHHHHHHHHHHHHHTTCCCSSS
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCCH----H---HHHHHHHHHHHHHHHHHHcCcccccc
Confidence 36899999999999999998753 64 588888751 1 1111110 0 0000
Q ss_pred --------cCCCCCHHHHHhccCCcEEEeecCCCC-CCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcE
Q 007112 423 --------HAPIKSLLDAVKAIKPTMLMGTSGVGK-TFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQA 493 (617)
Q Consensus 423 --------~~~~~~L~eaV~~vkPtvLIG~S~~~g-~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wT~Gra 493 (617)
.....++.|+++. .|++| .+.... .+.+++++.+.++...-.|++ ||=++ .++.+..+......
T Consensus 67 ~~~~~~~~i~~~~~~~eav~~--aDlVi-eavpe~~~~k~~v~~~l~~~~~~~~Ii~-s~tS~---i~~~~la~~~~~~~ 139 (319)
T 2dpo_A 67 SAEEQLSLISSCTNLAEAVEG--VVHIQ-ECVPENLDLKRKIFAQLDSIVDDRVVLS-SSSSC---LLPSKLFTGLAHVK 139 (319)
T ss_dssp CHHHHHHTEEEECCHHHHTTT--EEEEE-ECCCSCHHHHHHHHHHHHTTCCSSSEEE-ECCSS---CCHHHHHTTCTTGG
T ss_pred chHHHhhceEEeCCHHHHHhc--CCEEE-EeccCCHHHHHHHHHHHHhhCCCCeEEE-EeCCC---hHHHHHHHhcCCCC
Confidence 0123689999986 78877 333222 245677788877665444554 44222 44555555443322
Q ss_pred EEeeCCCCCcce
Q 007112 494 IFASGSPFDPVE 505 (617)
Q Consensus 494 ifASGSPF~pv~ 505 (617)
=|.-+-||.|+.
T Consensus 140 r~ig~Hp~~P~~ 151 (319)
T 2dpo_A 140 QCIVAHPVNPPY 151 (319)
T ss_dssp GEEEEEECSSTT
T ss_pred CeEEeecCCchh
Confidence 234455777764
No 51
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=93.30 E-value=2.3 Score=46.26 Aligned_cols=179 Identities=18% Similarity=0.200 Sum_probs=117.1
Q ss_pred ChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCCcHH--HHHHHHc---CC--Cceeec----------CccchhHHHHH
Q 007112 280 TGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAF--ELLSKYS---SS--HLVFND----------DIQGTASVVLA 342 (617)
Q Consensus 280 ~g~eY~~fidefv~av~~~fGp~~lIqfEDf~~~~Af--~lL~ryr---~~--~~~FND----------DiQGTaaV~LA 342 (617)
+..|-..|-..||.++.+..||+.-|-=+|++..-.. -+.+.|+ +. .-++-. .-.-||-=+.-
T Consensus 136 s~~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~ 215 (449)
T 1bgv_A 136 SDREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVY 215 (449)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHH
Confidence 3456777888899999888999999999999876221 1333443 22 122211 11335555566
Q ss_pred HHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCC-chh------
Q 007112 343 GILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESL-QHF------ 415 (617)
Q Consensus 343 gll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L-~~~------ 415 (617)
++-.+++..|.+|++.||+|-|.|..|...|++|.+. |. +=+-+.|++|-|++.. .+ ++.
T Consensus 216 ~~~~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~--Gi~d~edi~~l~ 282 (449)
T 1bgv_A 216 YVEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE--GITTEEKINYML 282 (449)
T ss_dssp HHHHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT--CSCSHHHHHHHH
T ss_pred HHHHHHHHccCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC--cCCCHHHHHHHH
Confidence 6777888899999999999999999999999888654 53 3344789888888753 34 221
Q ss_pred --c-------hhhhcc--cCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007112 416 --K-------KPWAHE--HAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 475 (617)
Q Consensus 416 --k-------~~fA~~--~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 475 (617)
+ ..|+.. .+.+. -.+ +-.++.|+|+=+.. ++..|++-.+.+.+ |.-.+|.-=+| |+
T Consensus 283 ~~k~~~~g~v~~y~~~~~a~~i~-~~e-~~~~~~Dil~P~A~-~~~I~~~na~~l~a-~g~kiV~EgAN~p~ 350 (449)
T 1bgv_A 283 EMRASGRNKVQDYADKFGVQFFP-GEK-PWGQKVDIIMPCAT-QNDVDLEQAKKIVA-NNVKYYIEVANMPT 350 (449)
T ss_dssp HHHHHCCCCTHHHHHHHTCEEEE-TCC-GGGSCCSEEECCSC-TTCBCHHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHHhccCCChhhcccccCCEEeC-chh-hhcCCcceeecccc-ccccchhhHHHHHh-cCCeEEEeCCCCcC
Confidence 1 111110 00000 001 22568899997775 67999999999854 33568888888 65
No 52
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=93.22 E-value=0.15 Score=55.49 Aligned_cols=129 Identities=19% Similarity=0.326 Sum_probs=72.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcc-cCC-----CCCHHHH
Q 007112 359 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-HAP-----IKSLLDA 432 (617)
Q Consensus 359 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~-~~~-----~~~L~ea 432 (617)
||+|+||||.|.. ..|+..+....-++.. -..|+|+|.+ .+|.+.....-+..+.. ..+ ..++.||
T Consensus 2 KI~iIGaGs~~~t--~~l~~~~~~~~~l~~~--~~ei~L~Di~----~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~eA 73 (477)
T 3u95_A 2 KISIVGAGSVRFA--LQLVEDIAQTDELSRE--DTHIYLMDVH----ERRLNASYILARKYVEELNSPVKVVKTESLDEA 73 (477)
T ss_dssp EEEEETTTSHHHH--HHHHHHHHTCTTTCST--TCEEEEECSC----HHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHH
T ss_pred EEEEECCCchhhH--HHHHHHHHhhHhcCCC--CCEEEEECCC----HHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHHH
Confidence 7999999997633 2233323221122110 1469999975 33321111111111111 112 2589999
Q ss_pred HhccCCcEEEeecC-------------------------------------CCC---CCC--------HHHHHHHHcCCC
Q 007112 433 VKAIKPTMLMGTSG-------------------------------------VGK---TFT--------KEVVEAMASFNE 464 (617)
Q Consensus 433 V~~vkPtvLIG~S~-------------------------------------~~g---~Ft--------eevv~~Ma~~~e 464 (617)
++. +|+.|=+.+ .|| +|- .++++.|.++|+
T Consensus 74 l~g--AD~Vi~~~g~~~~Rvg~~~~r~~de~~~ip~k~G~~~~~l~qet~g~gG~~~~lR~~~~i~v~~~i~~~i~~~~P 151 (477)
T 3u95_A 74 IEG--ADFIINTAYPYDPRYHDSGSQRWDEVTKVGEKHGYYRGIDSQELNMVSTYTYVLSSYPDVKLALEIAEKMKKMAP 151 (477)
T ss_dssp HTT--CSEEEECCCCCCTTTCSSHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTSCSTTTTHHHHHHHHHHHHHHHHHCT
T ss_pred hCC--CCEEEECcccccccccccccccceeeeccCcccceeecccccccCCccchhHHHhhhhhHHHHHHHHHHHHhhCC
Confidence 998 898884332 112 222 689999999999
Q ss_pred CcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCC
Q 007112 465 KPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSP 500 (617)
Q Consensus 465 rPIIFaLSNPt~~aEct~edA~~wT~GraifASGSP 500 (617)
.-+++=.|||. +-+|- -+.++++=|+|=..-||
T Consensus 152 ~A~~in~tNP~--~i~t~-a~~~~~~~k~vGlC~~~ 184 (477)
T 3u95_A 152 KAYLMQTANPV--FEITQ-AVRRWTGANIIGFCHGV 184 (477)
T ss_dssp TCEEEECSSCH--HHHHH-HHHHHHCCCEEEECCGG
T ss_pred CeEEEEecChH--HHHHH-HHHHhCCCCeEEECCCH
Confidence 99999999998 44443 23445554554433333
No 53
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=93.19 E-value=0.22 Score=54.69 Aligned_cols=111 Identities=16% Similarity=0.282 Sum_probs=78.6
Q ss_pred cchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCc
Q 007112 334 QGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ 413 (617)
Q Consensus 334 QGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~ 413 (617)
.|+......|+ .+.+|..+.+.+++|+|.|..|.++|+.+.. .|+ +++.+|++.. +. +.
T Consensus 257 ~~~~~~l~~gw---~~~~g~~L~GktVgIIG~G~IG~~vA~~l~~-----~G~-------~V~v~d~~~~----~~--~~ 315 (494)
T 3d64_A 257 YGCRESLVDGI---KRATDVMIAGKIAVVAGYGDVGKGCAQSLRG-----LGA-------TVWVTEIDPI----CA--LQ 315 (494)
T ss_dssp HHHHTTHHHHH---HHHHCCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECSCHH----HH--HH
T ss_pred Hhhhhhhhhhh---hhccccccCCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCChH----hH--HH
Confidence 34444445552 3578999999999999999999999998853 253 5888887521 00 11
Q ss_pred hhchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007112 414 HFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 414 ~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 475 (617)
.. ...-...+|.|+++. .|++|......++++++.++.|. +.-||.=.+...
T Consensus 316 a~-----~~G~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gAilINvgrg~ 367 (494)
T 3d64_A 316 AA-----MEGYRVVTMEYAADK--ADIFVTATGNYHVINHDHMKAMR---HNAIVCNIGHFD 367 (494)
T ss_dssp HH-----TTTCEECCHHHHTTT--CSEEEECSSSSCSBCHHHHHHCC---TTEEEEECSSSS
T ss_pred HH-----HcCCEeCCHHHHHhc--CCEEEECCCcccccCHHHHhhCC---CCcEEEEcCCCc
Confidence 00 111112479999986 99999998778899999999995 567888777754
No 54
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=92.98 E-value=0.26 Score=50.49 Aligned_cols=101 Identities=23% Similarity=0.291 Sum_probs=66.2
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCC---CCCHHHHHh
Q 007112 359 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAP---IKSLLDAVK 434 (617)
Q Consensus 359 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~---~~~L~eaV~ 434 (617)
||+|+|| |..|..++..|+. .|+ ...++++|.+- .++...+|.+...+ . +-.. ..++.++++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~--~~~~a~dL~~~~~~-~-~l~~~~~t~d~~~a~~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAH--TPGVAADLSHIETR-A-TVKGYLGPEQLPDCLK 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSS--HHHHHHHHTTSSSS-C-EEEEEESGGGHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCc--cHHHHHHHhccCcC-c-eEEEecCCCCHHHHhC
Confidence 7999998 9999998877652 354 35799999875 11100012221100 0 0011 136888998
Q ss_pred ccCCcEEEeecCCCC--------------CCCHHHHHHHHcCCCCcEEEecCCCC
Q 007112 435 AIKPTMLMGTSGVGK--------------TFTKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 435 ~vkPtvLIG~S~~~g--------------~Fteevv~~Ma~~~erPIIFaLSNPt 475 (617)
. .|++|=+.+.+. ...+++++.|.+++...+|+-.|||.
T Consensus 68 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv 120 (314)
T 1mld_A 68 G--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPV 120 (314)
T ss_dssp T--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred C--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCc
Confidence 7 899886555443 23567888888889998888899998
No 55
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=92.97 E-value=0.15 Score=52.00 Aligned_cols=49 Identities=20% Similarity=0.309 Sum_probs=41.6
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 342 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 342 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.|++.+++..|.++++.+++++|||.||.+|+..|.. .|. ++|+++++.
T Consensus 107 ~G~~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~-----~G~------~~v~v~nRt 155 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKD-----NFA------KDIYVVTRN 155 (282)
T ss_dssp HHHHHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HHHHHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 7889999988999999999999999888888877754 364 689999875
No 56
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.96 E-value=0.18 Score=52.06 Aligned_cols=102 Identities=20% Similarity=0.318 Sum_probs=67.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCccc----CCchhchhhhcccCCC---CCHH
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKE----SLQHFKKPWAHEHAPI---KSLL 430 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~----~L~~~k~~fA~~~~~~---~~L~ 430 (617)
.||.|+|||+.|.++|.+++.. |+ -+++|+|.+ .++-+ .+.+.. .+......+ .++.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~------~~V~L~D~~----~~~~~~~~~~l~~~~-~~~~~~~~i~~t~d~~ 73 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----EL------ADVVLYDVV----KGMPEGKALDLSHVT-SVVDTNVSVRAEYSYE 73 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSS----SSHHHHHHHHHHHHH-HHTTCCCCEEEECSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECC----hhHHHHHHHHHHhhh-hccCCCCEEEEeCCHH
Confidence 5899999999999999998763 54 139999986 22211 111111 111111122 6898
Q ss_pred HHHhccCCcEEEeecCCC---CC----------------CCHHHHHHHHcCCCCcEEEecCCCCCC
Q 007112 431 DAVKAIKPTMLMGTSGVG---KT----------------FTKEVVEAMASFNEKPVIFALSNPTSQ 477 (617)
Q Consensus 431 eaV~~vkPtvLIG~S~~~---g~----------------Fteevv~~Ma~~~erPIIFaLSNPt~~ 477 (617)
++++. .|++|=+.+.+ |. .-+++.+.|.++++.-+|+=-|||..-
T Consensus 74 ea~~~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~ 137 (331)
T 1pzg_A 74 AALTG--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDC 137 (331)
T ss_dssp HHHTT--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHH
T ss_pred HHhCC--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHH
Confidence 88987 89988665444 32 146888889899988888888999843
No 57
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=92.85 E-value=0.15 Score=51.63 Aligned_cols=50 Identities=22% Similarity=0.298 Sum_probs=40.4
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 341 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 341 LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
-.|++.+++..|.++++.+++|+|||.+|.+|+..+.. .|. ++|+++|+.
T Consensus 110 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~ 159 (281)
T 3o8q_A 110 GEGLVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLD-----QQP------ASITVTNRT 159 (281)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TCC------SEEEEEESS
T ss_pred HHHHHHHHHHhCCCccCCEEEEECchHHHHHHHHHHHh-----cCC------CeEEEEECC
Confidence 46788888888999999999999999877777766653 364 679999885
No 58
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=92.56 E-value=0.17 Score=51.13 Aligned_cols=57 Identities=21% Similarity=0.252 Sum_probs=42.7
Q ss_pred ccchhHHHHHHHHHH-HHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 333 IQGTASVVLAGILSA-LKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 333 iQGTaaV~LAgll~A-lr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
..|.-.= -.|++.+ ++..|.++++.+++|+|||.+|.+++..+.+ .|. ++|+++++.
T Consensus 96 l~G~NTD-~~G~~~~lL~~~~~~l~~k~~lvlGaGg~~~aia~~L~~-----~G~------~~v~i~~R~ 153 (272)
T 3pwz_A 96 IVAENFD-GIGLLRDIEENLGEPLRNRRVLLLGAGGAVRGALLPFLQ-----AGP------SELVIANRD 153 (272)
T ss_dssp EEEECCH-HHHHHHHHHTTSCCCCTTSEEEEECCSHHHHHHHHHHHH-----TCC------SEEEEECSC
T ss_pred EEEecCC-HHHHHHHHHHHcCCCccCCEEEEECccHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 3453332 4588888 8888889999999999999777777766654 364 679988874
No 59
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=92.32 E-value=0.13 Score=51.88 Aligned_cols=102 Identities=16% Similarity=0.198 Sum_probs=62.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCch---hchhhhcccCC--CCCHHHH
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH---FKKPWAHEHAP--IKSLLDA 432 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~---~k~~fA~~~~~--~~~L~ea 432 (617)
.||.|+|||+.|..+|..++.. |+ ...++++|++ .++.+.+.. +...+...... ..++ ++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~-----~~~V~l~d~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~ 66 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GV-----ADDYVFIDAN----EAKVKADQIDFQDAMANLEAHGNIVINDW-AA 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSS----HHHHHHHHHHHHHHGGGSSSCCEEEESCG-GG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEcCC----HHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HH
Confidence 3899999999999999988653 54 2579999985 221111110 00011100001 1356 66
Q ss_pred HhccCCcEEEeecCCC-------CCC-----------CHHHHHHHHcCCCCcEEEecCCCCC
Q 007112 433 VKAIKPTMLMGTSGVG-------KTF-----------TKEVVEAMASFNEKPVIFALSNPTS 476 (617)
Q Consensus 433 V~~vkPtvLIG~S~~~-------g~F-----------teevv~~Ma~~~erPIIFaLSNPt~ 476 (617)
++. .|++|=+...+ |.. -+++++.+.++++..+|+-+|||-.
T Consensus 67 ~~~--aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~ 126 (309)
T 1hyh_A 67 LAD--ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVD 126 (309)
T ss_dssp GTT--CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHH
T ss_pred hCC--CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcHH
Confidence 765 88887554432 211 1688888988888888888999984
No 60
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=92.08 E-value=0.25 Score=49.98 Aligned_cols=49 Identities=33% Similarity=0.369 Sum_probs=40.8
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 342 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 342 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.|++.+++..|.++++.|+|++|||-|+-+|+-.|.+ .|. ++|+++++.
T Consensus 110 ~Gf~~~L~~~g~~~~~~~~lilGaGGaarai~~aL~~-----~g~------~~i~i~nRt 158 (269)
T 3tum_A 110 AGFLGAAHKHGFEPAGKRALVIGCGGVGSAIAYALAE-----AGI------ASITLCDPS 158 (269)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC
T ss_pred HHHHHHHHHhCCCcccCeEEEEecHHHHHHHHHHHHH-----hCC------CeEEEeCCC
Confidence 4677889989999999999999999999998877654 364 689999873
No 61
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=92.03 E-value=0.97 Score=48.00 Aligned_cols=188 Identities=13% Similarity=0.093 Sum_probs=112.0
Q ss_pred CCceeecCc---cchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 325 SHLVFNDDI---QGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 325 ~~~~FNDDi---QGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.+.+.|.-- +.+|=-+++.+++..|-.|..|.+.+|.|+|.|..|-.+|+.+... |+ +++.+|+.
T Consensus 81 gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~ 148 (380)
T 2o4c_A 81 GIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQVGGRLVEVLRGL-----GW-------KVLVCDPP 148 (380)
T ss_dssp TCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECHH
T ss_pred CCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHHHHHHHHHHHHC-----CC-------EEEEEcCC
Confidence 455555432 2345558999999999999999999999999999999999988642 64 57888864
Q ss_pred CcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec---C-----CCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007112 402 GLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS---G-----VGKTFTKEVVEAMASFNEKPVIFALSN 473 (617)
Q Consensus 402 GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S---~-----~~g~Fteevv~~Ma~~~erPIIFaLSN 473 (617)
.- . . . ......+|.|+++. .|+++=.- . ..++|+++.++.|. +..+|.=.|.
T Consensus 149 ~~------~-~-----~---~g~~~~~l~ell~~--aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~sR 208 (380)
T 2o4c_A 149 RQ------A-R-----E---PDGEFVSLERLLAE--ADVISLHTPLNRDGEHPTRHLLDEPRLAALR---PGTWLVNASR 208 (380)
T ss_dssp HH------H-H-----S---TTSCCCCHHHHHHH--CSEEEECCCCCSSSSSCCTTSBCHHHHHTSC---TTEEEEECSC
T ss_pred hh------h-h-----c---cCcccCCHHHHHHh--CCEEEEeccCccccccchhhhcCHHHHhhCC---CCcEEEECCC
Confidence 10 0 0 0 01124589999986 89887542 1 34688999998885 5667776765
Q ss_pred CCCCCCCCHHHHhccccCcEEEeeCCCC--CcceeCCeeeccCCCCcccccchhhHHHHHhCCcccCHHHHHHHHHHHHh
Q 007112 474 PTSQSECTAEEAYTWSKGQAIFASGSPF--DPVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAA 551 (617)
Q Consensus 474 Pt~~aEct~edA~~wT~GraifASGSPF--~pv~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~ 551 (617)
-.---|-.-.+|+ .+|+..-|.=-=| +|. .+.. .. + +|..+-|=++--..- --..|...+++.+..
T Consensus 209 G~vvd~~aL~~aL--~~g~i~~A~LDV~~~EP~-~~~~-l~--~-~nvi~TPHiag~t~e-----~~~~~~~~~~~nl~~ 276 (380)
T 2o4c_A 209 GAVVDNQALRRLL--EGGADLEVALDVWEGEPQ-ADPE-LA--A-RCLIATPHIAGYSLE-----GKLRGTAQIYQAYCA 276 (380)
T ss_dssp GGGBCHHHHHHHH--HTTCCEEEEESCCTTTTS-CCHH-HH--T-TCSEECSSCTTCCHH-----HHHHHHHHHHHHHHH
T ss_pred CcccCHHHHHHHH--HhCCCceEEeeeeccCCC-Cchh-hc--c-CCEEEccccCcCCHH-----HHHHHHHHHHHHHHH
Confidence 2211121122333 3455433311111 110 1111 11 1 478888877632111 123455666667766
Q ss_pred ccCcc
Q 007112 552 QVTQE 556 (617)
Q Consensus 552 ~v~~~ 556 (617)
....+
T Consensus 277 ~l~g~ 281 (380)
T 2o4c_A 277 WRGIA 281 (380)
T ss_dssp HHTCC
T ss_pred HHcCC
Confidence 65543
No 62
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=91.96 E-value=0.22 Score=54.13 Aligned_cols=106 Identities=12% Similarity=0.250 Sum_probs=67.6
Q ss_pred CCCceEEEeCcChH--HHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcc---cCCCCCH
Q 007112 355 LADQTFLFLGAGEA--GTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE---HAPIKSL 429 (617)
Q Consensus 355 l~d~riv~~GAGsA--g~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~---~~~~~~L 429 (617)
++..||.|+|||+. |.|++..|+.. ..+ . ..++|+|.+ .++-+.+....+.+.+. -.-..++
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~----~~~----~-geV~L~Di~----~e~le~~~~~~~~l~~~~~~I~~TtD~ 69 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSID----ERM----S-GTVALYDLD----FEAAQKNEVIGNHSGNGRWRYEAVSTL 69 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHC----SSC----C-EEEEEECSS----HHHHHHHHHHHTTSTTSCEEEEEESSH
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhc----ccc----C-CeEEEEeCC----HHHHHHHHHHHHHHhccCCeEEEECCH
Confidence 45679999999995 78999888742 122 2 389999976 22100010000011110 0112589
Q ss_pred HHHHhccCCcEEEeecCCC---------------CCC---------------------CHHHHHHHHcCCCCcEEEecCC
Q 007112 430 LDAVKAIKPTMLMGTSGVG---------------KTF---------------------TKEVVEAMASFNEKPVIFALSN 473 (617)
Q Consensus 430 ~eaV~~vkPtvLIG~S~~~---------------g~F---------------------teevv~~Ma~~~erPIIFaLSN 473 (617)
.||++. .|.+|=.-.+| |.. -.++++.|.++++.-+++-.||
T Consensus 70 ~eAl~d--ADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tN 147 (450)
T 3fef_A 70 KKALSA--ADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTN 147 (450)
T ss_dssp HHHHTT--CSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred HHHhcC--CCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999988 89887544332 221 3577888889999999999999
Q ss_pred CC
Q 007112 474 PT 475 (617)
Q Consensus 474 Pt 475 (617)
|.
T Consensus 148 Pv 149 (450)
T 3fef_A 148 PM 149 (450)
T ss_dssp SH
T ss_pred ch
Confidence 98
No 63
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=91.87 E-value=1.3 Score=47.52 Aligned_cols=114 Identities=24% Similarity=0.272 Sum_probs=80.8
Q ss_pred ChhhHHHHHHHHHHHHHHhcCCCeeeeeecCCCCcHHH---HHHHHc---CCC----ceeecC----------ccchhHH
Q 007112 280 TGQEYAELLQEFMTAVKQNYGEKVLIQFEDFANHNAFE---LLSKYS---SSH----LVFNDD----------IQGTASV 339 (617)
Q Consensus 280 ~g~eY~~fidefv~av~~~fGp~~lIqfEDf~~~~Af~---lL~ryr---~~~----~~FNDD----------iQGTaaV 339 (617)
+.+|-..|...|++++.+.-||..-|-=+|++.. +.+ +.+.|+ ... .++--+ -.-||-=
T Consensus 115 s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~-~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~G 193 (419)
T 1gtm_A 115 SDREKERLARGYIRAIYDVISPYEDIPAPDVYTN-PQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARG 193 (419)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCC-HHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhhH
Confidence 4567788899999999998899998999999874 322 334442 221 133222 1236656
Q ss_pred HHHHHHHHHHHhCCC-CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEE-ccCCccc
Q 007112 340 VLAGILSALKLVGGT-LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLV-DSKGLIV 405 (617)
Q Consensus 340 ~LAgll~Alr~~g~~-l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lv-D~~GLi~ 405 (617)
+.-++-.+++..|.+ |++.++.|+|.|..|..+|+++... .|+ +++.+ |+.|-++
T Consensus 194 v~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~----~G~-------kVv~~sD~~g~~~ 250 (419)
T 1gtm_A 194 ASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSED----FGM-------KVVAVSDSKGGIY 250 (419)
T ss_dssp HHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEEECSSCEEE
T ss_pred HHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHh----cCC-------EEEEEeCCCcccc
Confidence 666777888889999 9999999999999999999988641 254 34444 8877544
No 64
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.75 E-value=0.28 Score=50.97 Aligned_cols=96 Identities=23% Similarity=0.333 Sum_probs=60.3
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc----ccCCCCCHH
Q 007112 355 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH----EHAPIKSLL 430 (617)
Q Consensus 355 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~----~~~~~~~L~ 430 (617)
+...+++|+|+|..|..+|+.+.. .|. +++++|++- ++ +...+..+.. +.....++.
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~-----~Ga-------~V~~~d~~~----~~---~~~~~~~~g~~~~~~~~~~~~l~ 224 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALG-----MGA-------QVTILDVNH----KR---LQYLDDVFGGRVITLTATEANIK 224 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HH---HHHHHHHTTTSEEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEECCH----HH---HHHHHHhcCceEEEecCCHHHHH
Confidence 778999999999999999888754 362 688888741 11 2111111111 011123577
Q ss_pred HHHhccCCcEEEeecCCCC-----CCCHHHHHHHHcCCCCcEEEecCCC
Q 007112 431 DAVKAIKPTMLMGTSGVGK-----TFTKEVVEAMASFNEKPVIFALSNP 474 (617)
Q Consensus 431 eaV~~vkPtvLIG~S~~~g-----~Fteevv~~Ma~~~erPIIFaLSNP 474 (617)
++++. .|++|.+.+.++ .++++.++.|. +.-+|.-+|.+
T Consensus 225 ~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk---~gg~iV~v~~~ 268 (369)
T 2eez_A 225 KSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMK---EGAVIVDVAVD 268 (369)
T ss_dssp HHHHH--CSEEEECCC-------CCSCHHHHTTSC---TTCEEEECC--
T ss_pred HHHhC--CCEEEECCCCCccccchhHHHHHHHhhc---CCCEEEEEecC
Confidence 88875 899999887553 46899999985 34566666643
No 65
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=91.64 E-value=0.27 Score=53.75 Aligned_cols=124 Identities=13% Similarity=0.144 Sum_probs=74.7
Q ss_pred CceEEEeCcChHH--HHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhh-c--ccCC---CCC
Q 007112 357 DQTFLFLGAGEAG--TGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA-H--EHAP---IKS 428 (617)
Q Consensus 357 d~riv~~GAGsAg--~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA-~--~~~~---~~~ 428 (617)
..||.|+|||+.| .++|..|+.. .++ +-..++|+|.+- ++-+........+. + .... ..+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~----~~l----~~~eV~L~Di~~----e~l~~~~~~~~~~l~~~~~~~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKT----PGL----SGSTVTLMDIDE----ERLDAILTIAKKYVEEVGADLKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTC----GGG----TTCEEEEECSCH----HHHHHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhc----CcC----CCCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCcEEEEECC
Confidence 4589999999965 4446666531 122 136799999862 22111111111211 1 1111 257
Q ss_pred HHHHHhccCCcEEEeecCCC---------------CCCC-------------------------HHHHHHHHcCCCCcEE
Q 007112 429 LLDAVKAIKPTMLMGTSGVG---------------KTFT-------------------------KEVVEAMASFNEKPVI 468 (617)
Q Consensus 429 L~eaV~~vkPtvLIG~S~~~---------------g~Ft-------------------------eevv~~Ma~~~erPII 468 (617)
+.++++. .|++|=+.+++ |.|. +++++.|.++|+.-+|
T Consensus 71 ~~eal~d--AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~i 148 (480)
T 1obb_A 71 LDDVIID--ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWY 148 (480)
T ss_dssp HHHHHTT--CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHhCC--CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEE
Confidence 8899987 89888655431 3333 6899999999999999
Q ss_pred EecCCCCCCCCCCHHHHhccccCcEEEeeC
Q 007112 469 FALSNPTSQSECTAEEAYTWSKGQAIFASG 498 (617)
Q Consensus 469 FaLSNPt~~aEct~edA~~wT~GraifASG 498 (617)
+-.|||. . +..+-+.++..-| +|.+|
T Consensus 149 i~~TNPv--d-i~t~~~~k~p~~r-viG~c 174 (480)
T 1obb_A 149 LQAANPI--F-EGTTLVTRTVPIK-AVGFC 174 (480)
T ss_dssp EECSSCH--H-HHHHHHHHHSCSE-EEEEC
T ss_pred EEeCCcH--H-HHHHHHHHCCCCc-EEecC
Confidence 9999998 2 3334445555444 55544
No 66
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=91.63 E-value=0.21 Score=48.60 Aligned_cols=109 Identities=14% Similarity=0.206 Sum_probs=62.0
Q ss_pred hCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcc--cCCcccCCc-hhchhhhcc--cCC
Q 007112 351 VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI--VSSRKESLQ-HFKKPWAHE--HAP 425 (617)
Q Consensus 351 ~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi--~~~R~~~L~-~~k~~fA~~--~~~ 425 (617)
...++...||.|+|+|..|.++|..+... | .+++++|++-=- .+.....+. .....++.. ...
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~-----G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADL-----G-------HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH 80 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee
Confidence 45578889999999999999999998753 5 368888875210 000000000 001223222 122
Q ss_pred CCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHH-HcCCCCcEEEecCCCC
Q 007112 426 IKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAM-ASFNEKPVIFALSNPT 475 (617)
Q Consensus 426 ~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~M-a~~~erPIIFaLSNPt 475 (617)
..++.|+++. +|++| ++-.+. ...++++.+ +..-+..+|.-+|||.
T Consensus 81 ~~~~~e~~~~--aDvVi-lavp~~-~~~~~~~~i~~~~l~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 LAAFADVAAG--AELVV-NATEGA-SSIAALTAAGAENLAGKILVDIANPL 127 (245)
T ss_dssp EEEHHHHHHH--CSEEE-ECSCGG-GHHHHHHHHCHHHHTTSEEEECCCCE
T ss_pred ccCHHHHHhc--CCEEE-EccCcH-HHHHHHHHhhhhhcCCCEEEECCCCC
Confidence 3579999987 88887 444332 345666666 4333667999999974
No 67
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=91.54 E-value=0.91 Score=50.07 Aligned_cols=179 Identities=21% Similarity=0.262 Sum_probs=117.4
Q ss_pred CChhhHHHHHHHHHHHHHH--hcCCCeeeeeecCCCCcHH--HHHHHHcC---CC------ceeecCc---------cch
Q 007112 279 ATGQEYAELLQEFMTAVKQ--NYGEKVLIQFEDFANHNAF--ELLSKYSS---SH------LVFNDDI---------QGT 336 (617)
Q Consensus 279 ~~g~eY~~fidefv~av~~--~fGp~~lIqfEDf~~~~Af--~lL~ryr~---~~------~~FNDDi---------QGT 336 (617)
.+..|-..|...||.++.+ ..||..-|-=+|++..-.. -+.+.|+. .. |+-..-+ .-|
T Consensus 136 ~s~~El~r~~r~f~~eL~~~~~IGp~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eAT 215 (501)
T 3mw9_A 136 YTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISAT 215 (501)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTSCBTTTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTHH
T ss_pred CCHHHHHHHHHHHHHHHhhccCCCCCeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCch
Confidence 4667888999999999985 7899999999999875321 26677752 11 1212211 234
Q ss_pred hHHHHHHHHH------HHHHhCC--CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCc
Q 007112 337 ASVVLAGILS------ALKLVGG--TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSR 408 (617)
Q Consensus 337 aaV~LAgll~------Alr~~g~--~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R 408 (617)
|-=+.-++-+ +++..|. +|++.||+|-|.|..|...|+.|.+. |. +=+-+.|++|-|++..
T Consensus 216 g~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaVQG~GNVG~~aa~~L~e~-----Ga------kVVavsDs~G~iyd~~ 284 (501)
T 3mw9_A 216 GRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRF-----GA------KCITVGESDGSIWNPD 284 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEEECTT
T ss_pred HHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEcCCceEECCC
Confidence 4444444433 3446675 48999999999999999999998753 63 4455899999999754
Q ss_pred ccCCchhch-hhhcccCCC------CCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007112 409 KESLQHFKK-PWAHEHAPI------KSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN-PT 475 (617)
Q Consensus 409 ~~~L~~~k~-~fA~~~~~~------~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN-Pt 475 (617)
.++..+. .+......+ ..+.+.+-.++.||||=+..+ +..|++-++.+ .-.||.--+| |+
T Consensus 285 --Gid~~~l~~~k~~~g~i~~~~~a~~~~~~il~~~~DIliPcA~~-n~I~~~na~~l----~akiV~EgAN~p~ 352 (501)
T 3mw9_A 285 --GIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASE-KQLTKSNAPRV----KAKIIAEGANGPT 352 (501)
T ss_dssp --CCCHHHHHHHHHHHSSSTTCTTSEEECSCGGGSCCSEEEECSSS-CCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred --CCCHHHHHHHHHhcCCeecccCceeeccccccccceEEeecccc-CccCHhHHHHc----CceEEEeCCCCcC
Confidence 3433221 111111000 000112456789999988776 79999988877 5789999998 54
No 68
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=91.23 E-value=1.1 Score=47.80 Aligned_cols=119 Identities=12% Similarity=0.134 Sum_probs=86.3
Q ss_pred CCceeecCc---cchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 325 SHLVFNDDI---QGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 325 ~~~~FNDDi---QGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.+.+.|.-- +.+|=-+++.+++..|..|..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+.
T Consensus 84 gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~~ 151 (381)
T 3oet_A 84 GIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEAL-----GI-------RTLLCDPP 151 (381)
T ss_dssp TCEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECHH
T ss_pred CEEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECCC
Confidence 455555432 3455668999999999999999999999999999999999998643 64 57878763
Q ss_pred CcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecC--------CCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007112 402 GLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG--------VGKTFTKEVVEAMASFNEKPVIFALSN 473 (617)
Q Consensus 402 GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~--------~~g~Fteevv~~Ma~~~erPIIFaLSN 473 (617)
. . . .. ......+|.|+++. .|+++=.-- .-++|+++.+..|. +..|+.=.|.
T Consensus 152 ~----~--~-~~--------~~~~~~sl~ell~~--aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~aR 211 (381)
T 3oet_A 152 R----A--A-RG--------DEGDFRTLDELVQE--ADVLTFHTPLYKDGPYKTLHLADETLIRRLK---PGAILINACR 211 (381)
T ss_dssp H----H--H-TT--------CCSCBCCHHHHHHH--CSEEEECCCCCCSSTTCCTTSBCHHHHHHSC---TTEEEEECSC
T ss_pred h----H--H-hc--------cCcccCCHHHHHhh--CCEEEEcCcCCccccccchhhcCHHHHhcCC---CCcEEEECCC
Confidence 1 0 0 00 11234689999987 898874421 34689999999995 6778887776
Q ss_pred CC
Q 007112 474 PT 475 (617)
Q Consensus 474 Pt 475 (617)
-.
T Consensus 212 G~ 213 (381)
T 3oet_A 212 GP 213 (381)
T ss_dssp GG
T ss_pred Cc
Confidence 33
No 69
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=91.08 E-value=2.3 Score=43.45 Aligned_cols=121 Identities=17% Similarity=0.138 Sum_probs=81.3
Q ss_pred CCCceeecCc---cchhHHHHHHHHHHHHH----------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHhcc
Q 007112 324 SSHLVFNDDI---QGTASVVLAGILSALKL----------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQT 384 (617)
Q Consensus 324 ~~~~~FNDDi---QGTaaV~LAgll~Alr~----------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~ 384 (617)
..+.+.|--- +.+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 90 ~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~----- 164 (313)
T 2ekl_A 90 RNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTKVGIIANAM----- 164 (313)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHHHHHHHHHT-----
T ss_pred CCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHHHHHHHHHC-----
Confidence 3456666432 23444588888888775 36789999999999999999999988642
Q ss_pred CCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecC----CCCCCCHHHHHHHH
Q 007112 385 KAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVEAMA 460 (617)
Q Consensus 385 G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv~~Ma 460 (617)
|+ +++.+|+.. +. . ..+ .+ .-...+|.|+++. .|+++=.-- ..++++++.++.|.
T Consensus 165 G~-------~V~~~d~~~----~~---~-~~~-~~---g~~~~~l~ell~~--aDvVvl~~P~~~~t~~li~~~~l~~mk 223 (313)
T 2ekl_A 165 GM-------KVLAYDILD----IR---E-KAE-KI---NAKAVSLEELLKN--SDVISLHVTVSKDAKPIIDYPQFELMK 223 (313)
T ss_dssp TC-------EEEEECSSC----CH---H-HHH-HT---TCEECCHHHHHHH--CSEEEECCCCCTTSCCSBCHHHHHHSC
T ss_pred CC-------EEEEECCCc----ch---h-HHH-hc---CceecCHHHHHhh--CCEEEEeccCChHHHHhhCHHHHhcCC
Confidence 64 688888741 11 0 000 01 1112379999986 898885432 34678899998885
Q ss_pred cCCCCcEEEecCC
Q 007112 461 SFNEKPVIFALSN 473 (617)
Q Consensus 461 ~~~erPIIFaLSN 473 (617)
+.-++.-.|.
T Consensus 224 ---~ga~lIn~ar 233 (313)
T 2ekl_A 224 ---DNVIIVNTSR 233 (313)
T ss_dssp ---TTEEEEESSC
T ss_pred ---CCCEEEECCC
Confidence 5678887777
No 70
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=90.90 E-value=1.2 Score=48.84 Aligned_cols=108 Identities=14% Similarity=0.184 Sum_probs=75.8
Q ss_pred HHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcc-cCCCC
Q 007112 349 KLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-HAPIK 427 (617)
Q Consensus 349 r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~-~~~~~ 427 (617)
|..+..+.+.+++|+|+|..|.++|+.+.. .|. +++.+|++- .+ + ..|.. .-...
T Consensus 266 r~~~~~l~GktV~IiG~G~IG~~~A~~lka-----~Ga-------~Viv~d~~~----~~---~-----~~A~~~Ga~~~ 321 (494)
T 3ce6_A 266 RGTDALIGGKKVLICGYGDVGKGCAEAMKG-----QGA-------RVSVTEIDP----IN---A-----LQAMMEGFDVV 321 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCH----HH---H-----HHHHHTTCEEC
T ss_pred hccCCCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH----HH---H-----HHHHHcCCEEe
Confidence 456678899999999999999999988754 252 688888641 11 1 11211 11124
Q ss_pred CHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhc
Q 007112 428 SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYT 487 (617)
Q Consensus 428 ~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~ 487 (617)
++.|+++. .|++|-+++..++++++.++.|. +.-+|.-.+... .|+..+..+.
T Consensus 322 ~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk---~ggilvnvG~~~--~eId~~aL~~ 374 (494)
T 3ce6_A 322 TVEEAIGD--ADIVVTATGNKDIIMLEHIKAMK---DHAILGNIGHFD--NEIDMAGLER 374 (494)
T ss_dssp CHHHHGGG--CSEEEECSSSSCSBCHHHHHHSC---TTCEEEECSSSG--GGBCHHHHHH
T ss_pred cHHHHHhC--CCEEEECCCCHHHHHHHHHHhcC---CCcEEEEeCCCC--CccCHHHHHH
Confidence 68888875 89999998888899999999985 566777777755 3666555443
No 71
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=90.89 E-value=0.18 Score=51.24 Aligned_cols=100 Identities=13% Similarity=0.276 Sum_probs=64.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccC----CchhchhhhcccCC---CCCHH
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKES----LQHFKKPWAHEHAP---IKSLL 430 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~----L~~~k~~fA~~~~~---~~~L~ 430 (617)
.||.|+|||+.|.++|..++.. |+ .+++++|.+- ++-+. +.+. ..+...... ..++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~------~~V~l~D~~~----~~~~~~~~~l~~~-~~~~~~~~~i~~t~d~- 67 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NL------ADVVLFDIAE----GIPQGKALDITHS-MVMFGSTSKVIGTDDY- 67 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SHHHHHHHHHHHH-HHHHTCCCCEEEESCG-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------ceEEEEeCCc----hHHHHHHHHHHhh-hhhcCCCcEEEECCCH-
Confidence 5899999999999999998754 54 1499999862 22111 1110 111110111 1456
Q ss_pred HHHhccCCcEEEeecCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 007112 431 DAVKAIKPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALSNPTS 476 (617)
Q Consensus 431 eaV~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt~ 476 (617)
++++. .|++|=+.+.+.. ..+++++.+.++++.-||+-.|||..
T Consensus 68 ~a~~~--aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~ 125 (317)
T 2ewd_A 68 ADISG--SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLD 125 (317)
T ss_dssp GGGTT--CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHH
Confidence 67765 8988866544431 24678888888888889999999973
No 72
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.83 E-value=0.39 Score=47.67 Aligned_cols=49 Identities=20% Similarity=0.246 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 341 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 341 LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
-.|++.+++..|.++++.+++|+|||.+|..+|..+... | .+++++|++
T Consensus 103 ~~G~~~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~~-----G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSL-----D-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHHc-----C-------CEEEEEECC
Confidence 567888888888899999999999998887777776542 4 468888875
No 73
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.60 E-value=0.071 Score=54.15 Aligned_cols=122 Identities=20% Similarity=0.311 Sum_probs=67.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCC--CCHHHHHhcc
Q 007112 359 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPI--KSLLDAVKAI 436 (617)
Q Consensus 359 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~--~~L~eaV~~v 436 (617)
||.|+|||+.|.++|..++. .|+ -..++++|.+---.++....+.+.. +|..+ ... .+ .++++.
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~g~-----~~eV~L~D~~~~~~~~~~~~l~~~~-~~~~~-~~i~~~~-~~a~~~- 67 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-----RGS-----CSELVLVDRDEDRAQAEAEDIAHAA-PVSHG-TRVWHGG-HSELAD- 67 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHHHHHHHTTSC-CTTSC-CEEEEEC-GGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCCHHHHHHHHHhhhhhh-hhcCC-eEEEECC-HHHhCC-
Confidence 79999999999999987754 254 2479999986210000000011111 11111 001 23 356665
Q ss_pred CCcEEEeecCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeC
Q 007112 437 KPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASG 498 (617)
Q Consensus 437 kPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wT~GraifASG 498 (617)
.|++|=+.+.+.. .-+++++.|+++++.-+|+-.|||.. .....+.+.+.-.-+|.+|
T Consensus 68 -aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~---~~~~~~~~~~~~~rviG~g 139 (304)
T 2v6b_A 68 -AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVD---LLTDLATQLAPGQPVIGSG 139 (304)
T ss_dssp -CSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHH---HHHHHHHHHSCSSCEEECT
T ss_pred -CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchH---HHHHHHHHhCChhcEEeCC
Confidence 8988866544432 12788888888888888877999984 2233344443333355554
No 74
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.52 E-value=0.44 Score=42.76 Aligned_cols=102 Identities=15% Similarity=0.159 Sum_probs=53.3
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCc-hhchhhhc-ccCCCCCHH
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ-HFKKPWAH-EHAPIKSLL 430 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~-~~k~~fA~-~~~~~~~L~ 430 (617)
+.+...+|+|+|+|..|..+|+.+.. .| .+++++|++ ..+.+.+. .....+.. +......|.
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~-----~g-------~~V~vid~~----~~~~~~~~~~~g~~~~~~d~~~~~~l~ 78 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASS-----SG-------HSVVVVDKN----EYAFHRLNSEFSGFTVVGDAAEFETLK 78 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC----GGGGGGSCTTCCSEEEESCTTSHHHHH
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC----HHHHHHHHhcCCCcEEEecCCCHHHHH
Confidence 34566899999999999999988854 25 368899875 22211122 11111111 101111233
Q ss_pred HH-HhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007112 431 DA-VKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN 473 (617)
Q Consensus 431 ea-V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 473 (617)
++ ++ ++|++|-+.+.. ..+..+++.+...+....|++.+|
T Consensus 79 ~~~~~--~ad~Vi~~~~~~-~~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 79 ECGME--KADMVFAFTNDD-STNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp TTTGG--GCSEEEECSSCH-HHHHHHHHHHHHTSCCSEEEEECS
T ss_pred HcCcc--cCCEEEEEeCCc-HHHHHHHHHHHHHCCCCeEEEEEC
Confidence 32 33 489998776643 233444444444355555555554
No 75
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=90.52 E-value=0.15 Score=52.44 Aligned_cols=111 Identities=11% Similarity=0.059 Sum_probs=67.1
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC--Ccc--cCCcccCCchhchhhhcccCCCCCHHHH
Q 007112 358 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK--GLI--VSSRKESLQHFKKPWAHEHAPIKSLLDA 432 (617)
Q Consensus 358 ~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~--GLi--~~~R~~~L~~~k~~fA~~~~~~~~L~ea 432 (617)
.||+|.|| |..|..++..|+. .|+-...-...++++|.+ .-- .++...+|.+.-.+|..+.....++.++
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTA 80 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHH
Confidence 58999998 9999998887754 243111112479999975 100 0000001221111222221223578999
Q ss_pred HhccCCcEEEeecCCCCC--------------CCHHHHHHHHcCC-CCcEEEecCCCC
Q 007112 433 VKAIKPTMLMGTSGVGKT--------------FTKEVVEAMASFN-EKPVIFALSNPT 475 (617)
Q Consensus 433 V~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~-erPIIFaLSNPt 475 (617)
++. .|++|=+.+.+.. .++++++++.+++ .+.+|+=.|||.
T Consensus 81 l~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv 136 (329)
T 1b8p_A 81 FKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPA 136 (329)
T ss_dssp TTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred hCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCch
Confidence 987 8988866654432 3568889999986 787777789997
No 76
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=90.49 E-value=1.1 Score=45.86 Aligned_cols=112 Identities=14% Similarity=0.169 Sum_probs=70.8
Q ss_pred HHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-
Q 007112 343 GILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH- 421 (617)
Q Consensus 343 gll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~- 421 (617)
+.+++-.+... ...+++|+|+|..|-.+++.+... .++ ++|+++|+. +. ..+...+..
T Consensus 109 s~laa~~La~~--~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~------~a---~~la~~l~~~ 167 (313)
T 3hdj_A 109 TVLAAGALARP--RSSVLGLFGAGTQGAEHAAQLSAR----FAL------EAILVHDPY------AS---PEILERIGRR 167 (313)
T ss_dssp HHHHHHHHSCT--TCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECTT------CC---HHHHHHHHHH
T ss_pred HHHHHHhhccC--CCcEEEEECccHHHHHHHHHHHHh----CCC------cEEEEECCc------HH---HHHHHHHHHh
Confidence 33444444433 457999999999998888876543 233 789999987 21 122222221
Q ss_pred ---ccCCCCCHHHHHhccCCcEEEeecCCC-CCCCHHHHHHHHcCCCCcEEEecCC--CCCCCCCCHHHH
Q 007112 422 ---EHAPIKSLLDAVKAIKPTMLMGTSGVG-KTFTKEVVEAMASFNEKPVIFALSN--PTSQSECTAEEA 485 (617)
Q Consensus 422 ---~~~~~~~L~eaV~~vkPtvLIG~S~~~-g~Fteevv~~Ma~~~erPIIFaLSN--Pt~~aEct~edA 485 (617)
+.... ++.|+++. .|++|-++... .+|..+.+ .+..+|..++. |. +.|+.++-.
T Consensus 168 ~g~~~~~~-~~~eav~~--aDIVi~aT~s~~pvl~~~~l------~~G~~V~~vGs~~p~-~~El~~~~~ 227 (313)
T 3hdj_A 168 CGVPARMA-APADIAAQ--ADIVVTATRSTTPLFAGQAL------RAGAFVGAIGSSLPH-TRELDDEAL 227 (313)
T ss_dssp HTSCEEEC-CHHHHHHH--CSEEEECCCCSSCSSCGGGC------CTTCEEEECCCSSTT-CCCCCHHHH
T ss_pred cCCeEEEe-CHHHHHhh--CCEEEEccCCCCcccCHHHc------CCCcEEEECCCCCCc-hhhcCHHHH
Confidence 11224 89999987 99999765443 24554332 46778888876 44 588888754
No 77
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.40 E-value=0.32 Score=48.43 Aligned_cols=49 Identities=24% Similarity=0.343 Sum_probs=40.1
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 341 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 341 LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
-.|++.+++..|.++++.+++|+|||.+|.++|..+... | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~-----G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQA-----Q-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHT-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 467888888888899999999999998888888777542 4 468888875
No 78
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=90.35 E-value=0.41 Score=48.94 Aligned_cols=101 Identities=17% Similarity=0.233 Sum_probs=64.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcc-cCCCCCHHHHHhcc
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-HAPIKSLLDAVKAI 436 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~eaV~~v 436 (617)
.||.|+|||..|.|+|..++.. |+ -..++|+|.+-= ..+...++.+ +..+ .....++ ++++.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~-----~~ev~L~Di~~~-~~g~a~dl~~----~~~~~i~~t~d~-~~l~~- 77 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GI-----ADRLVLLDLSEG-TKGATMDLEI----FNLPNVEISKDL-SASAH- 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECCC------CHHHHHH----HTCTTEEEESCG-GGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CC-----CCEEEEEcCCcc-hHHHHHHHhh----hcCCCeEEeCCH-HHHCC-
Confidence 6899999999999999998643 54 268999998631 1111111221 2111 0111466 67776
Q ss_pred CCcEEEeecCCCC--C-----------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 007112 437 KPTMLMGTSGVGK--T-----------FTKEVVEAMASFNEKPVIFALSNPTS 476 (617)
Q Consensus 437 kPtvLIG~S~~~g--~-----------Fteevv~~Ma~~~erPIIFaLSNPt~ 476 (617)
.|++|=+.+.+. - .-+++++.|.++++.-+|+-.|||..
T Consensus 78 -aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~ 129 (303)
T 2i6t_A 78 -SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVE 129 (303)
T ss_dssp -CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHH
T ss_pred -CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHH
Confidence 899886555431 0 13578888889999999888999984
No 79
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=90.12 E-value=0.5 Score=49.30 Aligned_cols=114 Identities=14% Similarity=0.156 Sum_probs=69.5
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc
Q 007112 342 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH 421 (617)
Q Consensus 342 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~ 421 (617)
+|.+++..+. +....++.|+|+|..|..++..+... .+. ++++++|+. .++ .......|..
T Consensus 116 ~s~laa~~la--~~~~~~v~iIGaG~~a~~~a~al~~~----~~~------~~V~V~~r~----~~~---a~~la~~~~~ 176 (350)
T 1x7d_A 116 TSLMAAQALA--RPNARKMALIGNGAQSEFQALAFHKH----LGI------EEIVAYDTD----PLA---TAKLIANLKE 176 (350)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSTTHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHTT
T ss_pred HHHHHHHHhc--cccCCeEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHHHh
Confidence 4556666553 24568999999999999988776543 233 678988874 222 2333333321
Q ss_pred --c--cCCCCCHHHHHhccCCcEEEeecCCC---CCCCHHHHHHHHcCCCCcEEEecCC--CCCCCCCCHH
Q 007112 422 --E--HAPIKSLLDAVKAIKPTMLMGTSGVG---KTFTKEVVEAMASFNEKPVIFALSN--PTSQSECTAE 483 (617)
Q Consensus 422 --~--~~~~~~L~eaV~~vkPtvLIG~S~~~---g~Fteevv~~Ma~~~erPIIFaLSN--Pt~~aEct~e 483 (617)
. .....++.|+++. .|++|=++..+ .+|..+.+ .+.=.|+.++. |. +-|+.++
T Consensus 177 ~~g~~~~~~~~~~eav~~--aDiVi~aTps~~~~pvl~~~~l------~~G~~V~~vgs~~p~-~~El~~~ 238 (350)
T 1x7d_A 177 YSGLTIRRASSVAEAVKG--VDIITTVTADKAYATIITPDML------EPGMHLNAVGGDCPG-KTELHAD 238 (350)
T ss_dssp CTTCEEEECSSHHHHHTT--CSEEEECCCCSSEEEEECGGGC------CTTCEEEECSCCBTT-BEEECHH
T ss_pred ccCceEEEeCCHHHHHhc--CCEEEEeccCCCCCceecHHHc------CCCCEEEECCCCCCC-ceeeCHH
Confidence 0 1224689999986 89998666543 13443322 23447777775 55 6777664
No 80
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=89.96 E-value=0.21 Score=51.50 Aligned_cols=123 Identities=17% Similarity=0.281 Sum_probs=72.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCccc----CCchhchhhhcccCCC---CCHH
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKE----SLQHFKKPWAHEHAPI---KSLL 430 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~----~L~~~k~~fA~~~~~~---~~L~ 430 (617)
.||.|+|||+.|.++|.+++. .|+ -+++|+|.+ .++-+ .+.+...++.. ...+ .++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~-----~g~------~~V~L~Di~----~~~l~~~~~~l~~~~~~~~~-~~~i~~t~d~- 77 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ-----KDL------GDVYMFDII----EGVPQGKALDLNHCMALIGS-PAKIFGENNY- 77 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECSS----TTHHHHHHHHHHHHHHHHTC-CCCEEEESCG-
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECC----HHHHHHHHHHHHhHhhccCC-CCEEEECCCH-
Confidence 589999999999999988764 254 139999986 22211 11111111111 1111 456
Q ss_pred HHHhccCCcEEEeecCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccc--cCcEE
Q 007112 431 DAVKAIKPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWS--KGQAI 494 (617)
Q Consensus 431 eaV~~vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wT--~Grai 494 (617)
++++. .|++|=+.+.+ |. .-+++.+.+.++++.-+|+=-|||.+- ..+-+.+.+ .-.-+
T Consensus 78 ~al~~--aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~~---~t~~~~~~~~~~~~rv 152 (328)
T 2hjr_A 78 EYLQN--SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLDA---MVYYFKEKSGIPANKV 152 (328)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHH---HHHHHHHHHCCCGGGE
T ss_pred HHHCC--CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchHH---HHHHHHHhcCCChhhE
Confidence 77876 89888554333 21 145778888888888787667999843 233333332 12335
Q ss_pred EeeCCCCC
Q 007112 495 FASGSPFD 502 (617)
Q Consensus 495 fASGSPF~ 502 (617)
|++|.+.+
T Consensus 153 iG~~t~Ld 160 (328)
T 2hjr_A 153 CGMSGVLD 160 (328)
T ss_dssp EESCHHHH
T ss_pred EEeCcHHH
Confidence 66665554
No 81
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=89.79 E-value=1.6 Score=43.40 Aligned_cols=81 Identities=17% Similarity=0.171 Sum_probs=54.5
Q ss_pred eecCCCCcHHHHHHHHcC------CCceeecCccchhHHHHHHHHHHHHHh-CCCCCCceEEEeC-cChHHHHHHHHHHH
Q 007112 307 FEDFANHNAFELLSKYSS------SHLVFNDDIQGTASVVLAGILSALKLV-GGTLADQTFLFLG-AGEAGTGIAELIAL 378 (617)
Q Consensus 307 fEDf~~~~Af~lL~ryr~------~~~~FNDDiQGTaaV~LAgll~Alr~~-g~~l~d~riv~~G-AGsAg~GIA~li~~ 378 (617)
++-+.-..+.+++++-+. ...+| .|..|.- ..-.|++.+++.. +.++++.++||.| +|.+|.++|..+.+
T Consensus 64 ~~G~~~~~~~~~~~~~~~~~~gavnt~~~-~~~~G~n-Td~~g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~~ 141 (287)
T 1lu9_A 64 VGGGDMAAGERVFEAVKKRFFGPFRVSCM-LDSNGSN-TTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAG 141 (287)
T ss_dssp EECSCHHHHHHHHHHHHHHCBTTBCCEEE-ECSTTHH-HHHHHHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHHHH
T ss_pred EccchHHHHHHHHHHHHHhcCCCeEEEEe-cCCCcCC-chHHHHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 444444466677776542 22344 3444532 3456777888777 7889999999999 89888888887764
Q ss_pred HHHhccCCCHHhhcCeEEEEccC
Q 007112 379 EMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 379 ~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.|. +++++|++
T Consensus 142 -----~G~-------~V~i~~R~ 152 (287)
T 1lu9_A 142 -----EGA-------EVVLCGRK 152 (287)
T ss_dssp -----TTC-------EEEEEESS
T ss_pred -----CcC-------EEEEEECC
Confidence 253 38888875
No 82
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=89.78 E-value=0.34 Score=47.92 Aligned_cols=37 Identities=30% Similarity=0.369 Sum_probs=32.2
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+|++.||+++|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 25 ~l~~~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d 61 (251)
T 1zud_1 25 KLLDSQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDD 61 (251)
T ss_dssp HHHTCEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCC
T ss_pred HHhcCcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 45688999999999999999988764 76 789999987
No 83
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=89.78 E-value=2.9 Score=42.88 Aligned_cols=122 Identities=17% Similarity=0.205 Sum_probs=78.3
Q ss_pred CCCceeecCc---cchhHHHHHHHHHHHHHh---------------------CCCCCCceEEEeCcChHHHHHHHHHHHH
Q 007112 324 SSHLVFNDDI---QGTASVVLAGILSALKLV---------------------GGTLADQTFLFLGAGEAGTGIAELIALE 379 (617)
Q Consensus 324 ~~~~~FNDDi---QGTaaV~LAgll~Alr~~---------------------g~~l~d~riv~~GAGsAg~GIA~li~~~ 379 (617)
..+.+.|--- +.+|=-+++.+|+..|-. |..|.+.+|.|+|.|..|..+|+.+..
T Consensus 98 ~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~- 176 (330)
T 2gcg_A 98 RGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKP- 176 (330)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECCSHHHHHHHHHHGG-
T ss_pred CCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEEEECcCHHHHHHHHHHHH-
Confidence 4677777543 334445788888887622 356889999999999999999998753
Q ss_pred HHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecC----CCCCCCHHH
Q 007112 380 MSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEV 455 (617)
Q Consensus 380 ~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteev 455 (617)
.|+ +++.+|+.. .+ ....+ .+ . -...+|.|+++. .|++|=.-. ..+++++++
T Consensus 177 ----~G~-------~V~~~d~~~----~~---~~~~~-~~--g-~~~~~l~e~l~~--aDvVi~~vp~~~~t~~~i~~~~ 232 (330)
T 2gcg_A 177 ----FGV-------QRFLYTGRQ----PR---PEEAA-EF--Q-AEFVSTPELAAQ--SDFIVVACSLTPATEGLCNKDF 232 (330)
T ss_dssp ----GTC-------CEEEEESSS----CC---HHHHH-TT--T-CEECCHHHHHHH--CSEEEECCCCCTTTTTCBSHHH
T ss_pred ----CCC-------EEEEECCCC----cc---hhHHH-hc--C-ceeCCHHHHHhh--CCEEEEeCCCChHHHHhhCHHH
Confidence 264 588888641 11 11111 11 0 011278898886 898874432 235778888
Q ss_pred HHHHHcCCCCcEEEecCC
Q 007112 456 VEAMASFNEKPVIFALSN 473 (617)
Q Consensus 456 v~~Ma~~~erPIIFaLSN 473 (617)
++.|. +..++.-.|.
T Consensus 233 ~~~mk---~gailIn~sr 247 (330)
T 2gcg_A 233 FQKMK---ETAVFINISR 247 (330)
T ss_dssp HHHSC---TTCEEEECSC
T ss_pred HhcCC---CCcEEEECCC
Confidence 88884 4567765555
No 84
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=89.70 E-value=4.4 Score=41.61 Aligned_cols=120 Identities=18% Similarity=0.223 Sum_probs=76.4
Q ss_pred CCceeecCc---cchhHHHHHHHHHHHHHh-------------------------CCCCCCceEEEeCcChHHHHHHHHH
Q 007112 325 SHLVFNDDI---QGTASVVLAGILSALKLV-------------------------GGTLADQTFLFLGAGEAGTGIAELI 376 (617)
Q Consensus 325 ~~~~FNDDi---QGTaaV~LAgll~Alr~~-------------------------g~~l~d~riv~~GAGsAg~GIA~li 376 (617)
.+.+.|--- +.+|=-+++.+|+..|-. |..|.+.+|.|+|+|..|..+|+.+
T Consensus 90 gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l 169 (334)
T 2dbq_A 90 GIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRA 169 (334)
T ss_dssp TCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSHHHHHHHHHH
T ss_pred CCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEEccCHHHHHHHHHH
Confidence 455555432 233444778888776621 4578899999999999999999988
Q ss_pred HHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecC----CCCCCC
Q 007112 377 ALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFT 452 (617)
Q Consensus 377 ~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Ft 452 (617)
.. .|+ +++.+|+.. .. + .. ..+ .-...+|.++++. .|+++=.-. ..++++
T Consensus 170 ~~-----~G~-------~V~~~d~~~----~~-~---~~-~~~---g~~~~~l~~~l~~--aDvVil~vp~~~~t~~~i~ 223 (334)
T 2dbq_A 170 KG-----FNM-------RILYYSRTR----KE-E---VE-REL---NAEFKPLEDLLRE--SDFVVLAVPLTRETYHLIN 223 (334)
T ss_dssp HH-----TTC-------EEEEECSSC----CH-H---HH-HHH---CCEECCHHHHHHH--CSEEEECCCCCTTTTTCBC
T ss_pred Hh-----CCC-------EEEEECCCc----ch-h---hH-hhc---CcccCCHHHHHhh--CCEEEECCCCChHHHHhhC
Confidence 64 253 688888752 11 1 00 011 0112478898886 888874322 125777
Q ss_pred HHHHHHHHcCCCCcEEEecCC
Q 007112 453 KEVVEAMASFNEKPVIFALSN 473 (617)
Q Consensus 453 eevv~~Ma~~~erPIIFaLSN 473 (617)
+++++.|. +..+|.-.|.
T Consensus 224 ~~~~~~mk---~~ailIn~sr 241 (334)
T 2dbq_A 224 EERLKLMK---KTAILINIAR 241 (334)
T ss_dssp HHHHHHSC---TTCEEEECSC
T ss_pred HHHHhcCC---CCcEEEECCC
Confidence 88888884 5567776664
No 85
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=89.57 E-value=0.2 Score=50.89 Aligned_cols=103 Identities=17% Similarity=0.252 Sum_probs=63.8
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc--CCcccCCcccCCchhchhhhcccCC-CCCHHHHHh
Q 007112 359 TFLFLG-AGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS--KGLIVSSRKESLQHFKKPWAHEHAP-IKSLLDAVK 434 (617)
Q Consensus 359 riv~~G-AGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~--~GLi~~~R~~~L~~~k~~fA~~~~~-~~~L~eaV~ 434 (617)
||+|.| ||..|..++..|+. .|+ ...++|+|. +-=-.++-..+|.+... +.++..- ..+ .++++
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~v~~~~-~~a~~ 69 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIAL-----RDI-----ADEVVFVDIPDKEDDTVGQAADTNHGIA-YDSNTRVRQGG-YEDTA 69 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TTC-----CSEEEEECCGGGHHHHHHHHHHHHHHHT-TTCCCEEEECC-GGGGT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEcCCCChhhHHHHHHHHHHHHh-hCCCcEEEeCC-HHHhC
Confidence 899999 99999998887754 243 256999997 31000000001222111 1111000 023 56677
Q ss_pred ccCCcEEEeecCCCC---C-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007112 435 AIKPTMLMGTSGVGK---T-----------FTKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 435 ~vkPtvLIG~S~~~g---~-----------Fteevv~~Ma~~~erPIIFaLSNPt 475 (617)
. .|++|=+.+.+. - .+++++++|.+++.+.+|+--|||.
T Consensus 70 ~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv 122 (303)
T 1o6z_A 70 G--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPV 122 (303)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSH
T ss_pred C--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChH
Confidence 6 899886666553 2 4678889999999999999999997
No 86
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=89.51 E-value=0.29 Score=50.29 Aligned_cols=102 Identities=16% Similarity=0.211 Sum_probs=64.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCccc----CCchhchhhhccc--CCCCCHHH
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKE----SLQHFKKPWAHEH--APIKSLLD 431 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~----~L~~~k~~fA~~~--~~~~~L~e 431 (617)
.||.|+|||+.|.++|.+++.. |+- +++|+|.+ .++-+ .+.+...+..... ....++ +
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~-----g~~------~v~L~Di~----~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~ 68 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK-----NLG------DVVLFDIV----KNMPHGKALDTSHTNVMAYSNCKVSGSNTY-D 68 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TCC------EEEEECSS----SSHHHHHHHHHHTHHHHHTCCCCEEEECCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC------eEEEEeCC----HHHHHHHHHHHHhhhhhcCCCcEEEECCCH-H
Confidence 4899999999999999888752 551 39999975 22211 1111111111110 011466 7
Q ss_pred HHhccCCcEEEeecCCC---CC----------------CCHHHHHHHHcCCCCcEEEecCCCCCC
Q 007112 432 AVKAIKPTMLMGTSGVG---KT----------------FTKEVVEAMASFNEKPVIFALSNPTSQ 477 (617)
Q Consensus 432 aV~~vkPtvLIG~S~~~---g~----------------Fteevv~~Ma~~~erPIIFaLSNPt~~ 477 (617)
+++. .|++|=+.+.+ |. .-+++.+.|.++++.-+|+=.|||.+.
T Consensus 69 al~~--aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~ 131 (322)
T 1t2d_A 69 DLAG--ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDV 131 (322)
T ss_dssp GGTT--CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHH
T ss_pred HhCC--CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHH
Confidence 7876 89888664433 21 356788888888888887777999843
No 87
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=89.35 E-value=0.25 Score=53.38 Aligned_cols=127 Identities=14% Similarity=0.230 Sum_probs=76.3
Q ss_pred ceEEEeCcChH-HHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc--c-cCC---CCCHH
Q 007112 358 QTFLFLGAGEA-GTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH--E-HAP---IKSLL 430 (617)
Q Consensus 358 ~riv~~GAGsA-g~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~--~-~~~---~~~L~ 430 (617)
.||.|+|||+. |.+++..|+.. ..++. -..++|+|.+-- +++.+.+......+.. . ... ..++.
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~---~~~l~----~~ev~L~Di~~~--~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~ 78 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKR---YHELP----VGELWLVDIPEG--KEKLEIVGALAKRMVEKAGVPIEIHLTLDRR 78 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHT---TTTCC----EEEEEEECCGGG--HHHHHHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCCCC----CCEEEEEEcCCC--hHHHHHHHHHHHHHHhhcCCCcEEEEeCCHH
Confidence 58999999997 55555555431 12442 257999998620 0221111111122211 1 111 25788
Q ss_pred HHHhccCCcEEEeecCCCCC----------------------------------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 007112 431 DAVKAIKPTMLMGTSGVGKT----------------------------------FTKEVVEAMASFNEKPVIFALSNPTS 476 (617)
Q Consensus 431 eaV~~vkPtvLIG~S~~~g~----------------------------------Fteevv~~Ma~~~erPIIFaLSNPt~ 476 (617)
++++. .|++|=+.++++. .-+++++.|.++|+.-+|+-.|||..
T Consensus 79 eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvd 156 (450)
T 1s6y_A 79 RALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAG 156 (450)
T ss_dssp HHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred HHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHH
Confidence 99997 9999877665431 13588899999999999999999982
Q ss_pred CCCCCHHHHhccccCcEEEeeC
Q 007112 477 QSECTAEEAYTWSKGQAIFASG 498 (617)
Q Consensus 477 ~aEct~edA~~wT~GraifASG 498 (617)
+..+-+++.+.-.-+|.+|
T Consensus 157 ---ivT~a~~k~~p~~rViG~c 175 (450)
T 1s6y_A 157 ---MVTEAVLRYTKQEKVVGLC 175 (450)
T ss_dssp ---HHHHHHHHHCCCCCEEECC
T ss_pred ---HHHHHHHHhCCCCCEEEeC
Confidence 2333444555332455554
No 88
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=89.34 E-value=2 Score=41.33 Aligned_cols=92 Identities=10% Similarity=0.191 Sum_probs=61.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhcc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI 436 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 436 (617)
..||.|+|+|..|..+|..+... |.. ...+++++|++ .++ + ......++.|+++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~-----g~~---~~~~v~~~~~~----~~~----------~--g~~~~~~~~~~~~~- 58 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA-----NII---KKENLFYYGPS----KKN----------T--TLNYMSSNEELARH- 58 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH-----TSS---CGGGEEEECSS----CCS----------S--SSEECSCHHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----CCC---CCCeEEEEeCC----ccc----------C--ceEEeCCHHHHHhc-
Confidence 35899999999999999988653 420 01368888874 111 0 00112467788875
Q ss_pred CCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 007112 437 KPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTS 476 (617)
Q Consensus 437 kPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~ 476 (617)
+|++| ++..+ -..+++++.+..+.+..+|+.++|..+
T Consensus 59 -~D~vi-~~v~~-~~~~~v~~~l~~~l~~~~vv~~~~gi~ 95 (262)
T 2rcy_A 59 -CDIIV-CAVKP-DIAGSVLNNIKPYLSSKLLISICGGLN 95 (262)
T ss_dssp -CSEEE-ECSCT-TTHHHHHHHSGGGCTTCEEEECCSSCC
T ss_pred -CCEEE-EEeCH-HHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 78777 33333 467888888876556668888888775
No 89
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=89.30 E-value=1.1 Score=45.54 Aligned_cols=114 Identities=15% Similarity=0.163 Sum_probs=64.7
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc
Q 007112 342 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH 421 (617)
Q Consensus 342 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~ 421 (617)
++.+++..+. +....+|.|+|+|..|..++..+... .|. ++++++|+. .++ .....+.+..
T Consensus 122 ~~~la~~~la--~~~~~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr~----~~~---~~~l~~~~~~ 182 (312)
T 2i99_A 122 VSAIATKFLK--PPSSEVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNRT----KEN---AEKFADTVQG 182 (312)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECSS----HHH---HHHHHHHSSS
T ss_pred HHHHHHHHhC--CCCCcEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHhhC
Confidence 3455554442 45667999999999999999887653 243 578888863 111 2222222110
Q ss_pred ccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecC--CCCCCCCCCH
Q 007112 422 EHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALS--NPTSQSECTA 482 (617)
Q Consensus 422 ~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS--NPt~~aEct~ 482 (617)
......++.|+++. +|++|=+... +++++.. ....+.-+|+.+| +|. .-|+.+
T Consensus 183 ~~~~~~~~~e~v~~--aDiVi~atp~----~~~v~~~-~~l~~g~~vi~~g~~~p~-~~el~~ 237 (312)
T 2i99_A 183 EVRVCSSVQEAVAG--ADVIITVTLA----TEPILFG-EWVKPGAHINAVGASRPD-WRELDD 237 (312)
T ss_dssp CCEECSSHHHHHTT--CSEEEECCCC----SSCCBCG-GGSCTTCEEEECCCCSTT-CCSBCH
T ss_pred CeEEeCCHHHHHhc--CCEEEEEeCC----CCcccCH-HHcCCCcEEEeCCCCCCC-ceeccH
Confidence 01124689999986 8988854332 1233321 1223556888874 353 355543
No 90
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=88.98 E-value=0.35 Score=52.72 Aligned_cols=126 Identities=17% Similarity=0.249 Sum_probs=76.4
Q ss_pred CceEEEeCcChH-HHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhh-c-c-cCC---CCCH
Q 007112 357 DQTFLFLGAGEA-GTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA-H-E-HAP---IKSL 429 (617)
Q Consensus 357 d~riv~~GAGsA-g~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA-~-~-~~~---~~~L 429 (617)
..||.|+|||+. +.++|..|+.. ..++. -..++|+|.+- ++.+.+......+. . . ... ..++
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~---~~~l~----~~eV~L~Di~~----e~~~~~~~~~~~~l~~~~~~~~I~~t~D~ 96 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDH---LEEFP----IRKLKLYDNDK----ERQDRIAGACDVFIREKAPDIEFAATTDP 96 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHT---TTTSC----EEEEEEECSCH----HHHHHHHHHHHHHHHHHCTTSEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhC---CCCCC----CCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCCEEEEECCH
Confidence 469999999996 55566665431 01432 25799999862 22111111112221 1 1 111 2589
Q ss_pred HHHHhccCCcEEEeecCCCCC----------------------------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007112 430 LDAVKAIKPTMLMGTSGVGKT----------------------------------FTKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 430 ~eaV~~vkPtvLIG~S~~~g~----------------------------------Fteevv~~Ma~~~erPIIFaLSNPt 475 (617)
.++++. .|++|=+.+.++. .=+++++.|.++|+.-+|+-.|||.
T Consensus 97 ~eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPv 174 (472)
T 1u8x_X 97 EEAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPA 174 (472)
T ss_dssp HHHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCH
T ss_pred HHHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 999987 9998866655321 1358889999999999999999998
Q ss_pred CCCCCCHHHHhccccCcEEEeeC
Q 007112 476 SQSECTAEEAYTWSKGQAIFASG 498 (617)
Q Consensus 476 ~~aEct~edA~~wT~GraifASG 498 (617)
. +..+-+++.+.-.-+|.+|
T Consensus 175 d---i~T~~~~k~~p~~rViG~c 194 (472)
T 1u8x_X 175 A---IVAEATRRLRPNSKILNIC 194 (472)
T ss_dssp H---HHHHHHHHHSTTCCEEECC
T ss_pred H---HHHHHHHHhCCCCCEEEeC
Confidence 2 2334444545332455554
No 91
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=88.92 E-value=0.26 Score=42.35 Aligned_cols=102 Identities=10% Similarity=0.119 Sum_probs=52.6
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHh
Q 007112 355 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVK 434 (617)
Q Consensus 355 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~ 434 (617)
++..+|+|+|+|..|..+|+.+.. .| .+++++|++. .+.+.+......+.. .+..+. +.++
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~-----~g-------~~v~~~d~~~----~~~~~~~~~~~~~~~--~d~~~~-~~l~ 64 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHR-----MG-------HEVLAVDINE----EKVNAYASYATHAVI--ANATEE-NELL 64 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHH-----TT-------CCCEEEESCH----HHHHTTTTTCSEEEE--CCTTCH-HHHH
T ss_pred CcCCcEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCCH----HHHHHHHHhCCEEEE--eCCCCH-HHHH
Confidence 456789999999999999888754 25 2577888751 111112111111111 111222 2222
Q ss_pred c---cCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007112 435 A---IKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 435 ~---vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 475 (617)
. -++|++|=+.+..-..+..+++...+.+...||...+||.
T Consensus 65 ~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~ 108 (144)
T 2hmt_A 65 SLGIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYY 108 (144)
T ss_dssp TTTGGGCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCSHH
T ss_pred hcCCCCCCEEEECCCCchHHHHHHHHHHHHcCCCeEEEEeCCHH
Confidence 2 2589998665532012234444444555566777676665
No 92
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=88.86 E-value=0.75 Score=45.72 Aligned_cols=84 Identities=21% Similarity=0.372 Sum_probs=56.7
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc
Q 007112 342 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH 421 (617)
Q Consensus 342 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~ 421 (617)
.|++.+++..|.++++.+++|+|+|.+|..+|..+... |. +++++|++ .++ .......|.
T Consensus 114 ~G~~~~l~~~~~~~~~~~v~iiGaG~~g~aia~~L~~~-----g~-------~V~v~~r~----~~~---~~~l~~~~g- 173 (275)
T 2hk9_A 114 IGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKE-----GA-------KVFLWNRT----KEK---AIKLAQKFP- 173 (275)
T ss_dssp HHHHHHHHHHCTTGGGSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSS----HHH---HHHHTTTSC-
T ss_pred HHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHc-----CC-------EEEEEECC----HHH---HHHHHHHcC-
Confidence 48888888888899999999999999999998888653 52 68888875 111 111111110
Q ss_pred ccCCCCCHHHHHhccCCcEEEeecCCC
Q 007112 422 EHAPIKSLLDAVKAIKPTMLMGTSGVG 448 (617)
Q Consensus 422 ~~~~~~~L~eaV~~vkPtvLIG~S~~~ 448 (617)
.....++.++++. +|++|-+...+
T Consensus 174 -~~~~~~~~~~~~~--aDiVi~atp~~ 197 (275)
T 2hk9_A 174 -LEVVNSPEEVIDK--VQVIVNTTSVG 197 (275)
T ss_dssp -EEECSCGGGTGGG--CSEEEECSSTT
T ss_pred -CeeehhHHhhhcC--CCEEEEeCCCC
Confidence 0112267777765 89999766644
No 93
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=88.80 E-value=0.27 Score=50.82 Aligned_cols=105 Identities=17% Similarity=0.248 Sum_probs=64.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 437 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 437 (617)
.||.|+|||+.|..+|-+|+.. ++ -..++|+|.+-=-.++...+|.+.. +|.++..-..+-.++++.
T Consensus 10 ~KI~IiGaG~vG~~la~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~i~~~~~~a~~~-- 76 (326)
T 2zqz_A 10 QKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLSNAL-PFTSPKKIYSAEYSDAKD-- 76 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTTG-GGSCCCEEEECCGGGGGG--
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHhHHHHHHHHHHH-HhcCCeEEEECCHHHhCC--
Confidence 6999999999999988877442 44 2689999984100000000122211 232210000133567777
Q ss_pred CcEEEeecCCCCCC--------------CHHHHHHHHcCCCCcEEEecCCCC
Q 007112 438 PTMLMGTSGVGKTF--------------TKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 438 PtvLIG~S~~~g~F--------------teevv~~Ma~~~erPIIFaLSNPt 475 (617)
.|++|=+.+.+..- -+++++.|.++++.-+|+-.|||.
T Consensus 77 aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 128 (326)
T 2zqz_A 77 ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV 128 (326)
T ss_dssp CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 89998666555321 245677778889999999999998
No 94
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=88.79 E-value=0.15 Score=52.13 Aligned_cols=105 Identities=16% Similarity=0.250 Sum_probs=62.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCC-CCHHHHHhcc
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPI-KSLLDAVKAI 436 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~-~~L~eaV~~v 436 (617)
.||.|+|||..|.++|-.+... |+ ...++++|.+--..+....++.+. .++......+ .+..++++.
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-----~~-----~~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~~~al~~- 74 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-----GI-----ADEIVLIDANESKAIGDAMDFNHG-KVFAPKPVDIWHGDYDDCRD- 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHHH-TTSSSSCCEEEECCGGGTTT-
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCcchHHHHHhhHHHH-hhhcCCCeEEEcCcHHHhCC-
Confidence 5999999999999999776542 44 257999998621111000012111 1111100000 123466765
Q ss_pred CCcEEEeecCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007112 437 KPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 437 kPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt 475 (617)
.|++|=+.+.+.. .-+++++.|.++++.-++|-.|||-
T Consensus 75 -aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv 126 (316)
T 1ldn_A 75 -ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPV 126 (316)
T ss_dssp -CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCch
Confidence 8988866555431 2357788888888888888889997
No 95
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=88.60 E-value=1.2 Score=44.24 Aligned_cols=94 Identities=11% Similarity=0.104 Sum_probs=57.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc--CCcccCCcccCCchhchhhh--------cccCCCC-
Q 007112 359 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS--KGLIVSSRKESLQHFKKPWA--------HEHAPIK- 427 (617)
Q Consensus 359 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~--~GLi~~~R~~~L~~~k~~fA--------~~~~~~~- 427 (617)
||.|+|+|..|..+|..+... | .+++++|+ +.= + +...++... .......
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g-------~~V~~~~r~~~~~----~---~~~~~~~~~~~~~g~~~~~~~~~~~ 62 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----G-------NEVRIWGTEFDTE----I---LKSISAGREHPRLGVKLNGVEIFWP 62 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----C-------CEEEEECCGGGHH----H---HHHHHTTCCBTTTTBCCCSEEEECG
T ss_pred EEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEEccCCHH----H---HHHHHHhCcCcccCccccceEEecH
Confidence 799999999999999988653 5 36888887 310 0 111110000 0000112
Q ss_pred -CHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007112 428 -SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 428 -~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 475 (617)
++.|+++. .|++|= +... -..+++++.++...+..+|..++|-.
T Consensus 63 ~~~~~~~~~--~D~vi~-~v~~-~~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 63 EQLEKCLEN--AEVVLL-GVST-DGVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp GGHHHHHTT--CSEEEE-CSCG-GGHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred HhHHHHHhc--CCEEEE-cCCh-HHHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 67777765 787763 3323 36788888876533456788888865
No 96
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=88.52 E-value=0.32 Score=49.94 Aligned_cols=101 Identities=16% Similarity=0.279 Sum_probs=63.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCccc----CCchhchhhhcccCCCCCHHHHH
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKE----SLQHFKKPWAHEHAPIKSLLDAV 433 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~----~L~~~k~~fA~~~~~~~~L~eaV 433 (617)
.||.|+|||+.|..+|-+|+.. ++ -..++|+|.+ .++.+ +|.+.. +|.++..-..+-.+++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~----~~~~~g~~~dl~~~~-~~~~~~~v~~~~~~a~ 70 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GI-----AEEFVIVDVV----KDRTKGDALDLEDAQ-AFTAPKKIYSGEYSDC 70 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSS----HHHHHHHHHHHHGGG-GGSCCCEEEECCGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCC----chHHHHHHHHHHHHH-HhcCCeEEEECCHHHh
Confidence 5999999999999988876543 44 2689999984 11110 122211 2322110001335677
Q ss_pred hccCCcEEEeecCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007112 434 KAIKPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 434 ~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt 475 (617)
+. .|++|=+.+.+.. .-+++++.|.+++..-+|+-.|||.
T Consensus 71 ~~--aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 124 (318)
T 1ez4_A 71 KD--ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPV 124 (318)
T ss_dssp TT--CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred CC--CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcH
Confidence 76 8998866555422 2345777788899999999999998
No 97
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=88.29 E-value=0.49 Score=48.21 Aligned_cols=102 Identities=16% Similarity=0.325 Sum_probs=61.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCch---hchhhhccc-CCCCCHHHHHh
Q 007112 359 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH---FKKPWAHEH-APIKSLLDAVK 434 (617)
Q Consensus 359 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~---~k~~fA~~~-~~~~~L~eaV~ 434 (617)
||.|+|||+.|.++|..++.. |. ...++++|.+- ++.+.+.. +-.++.... -...+ .++++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~-----~~~V~l~D~~~----~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~ 66 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GF-----AREMVLIDVDK----KRAEGDALDLIHGTPFTRRANIYAGD-YADLK 66 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HHHHHHHHHHHHHGGGSCCCEEEECC-GGGGT
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCCh----HHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhC
Confidence 799999999999999887653 53 14799999851 11111100 000111000 00123 35565
Q ss_pred ccCCcEEEeecCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCCCC
Q 007112 435 AIKPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALSNPTSQ 477 (617)
Q Consensus 435 ~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt~~ 477 (617)
. .|++|=+.+.+.. .-+++++.|.++++.-+|+-.|||...
T Consensus 67 ~--aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~ 121 (319)
T 1a5z_A 67 G--SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDV 121 (319)
T ss_dssp T--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHH
T ss_pred C--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHHH
Confidence 4 8888755544431 127888899888887788889999843
No 98
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=88.24 E-value=3.5 Score=43.02 Aligned_cols=189 Identities=17% Similarity=0.180 Sum_probs=111.8
Q ss_pred CCceeecCc---cchhHHHHHHHHHHHHH---------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHH
Q 007112 325 SHLVFNDDI---QGTASVVLAGILSALKL---------------------VGGTLADQTFLFLGAGEAGTGIAELIALEM 380 (617)
Q Consensus 325 ~~~~FNDDi---QGTaaV~LAgll~Alr~---------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~ 380 (617)
.+++.|--- +.+|=-+++-+|+..|- .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 117 gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~-- 194 (345)
T 4g2n_A 117 GIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARG-- 194 (345)
T ss_dssp TCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHT--
T ss_pred CEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHH--
Confidence 455555432 34566678888887763 2567899999999999999999999863
Q ss_pred HhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecC----CCCCCCHHHH
Q 007112 381 SKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVV 456 (617)
Q Consensus 381 ~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv 456 (617)
.|+ +++.+|+... . .. .+.......+|.|+++. .|+++=.-- .-++|+++.+
T Consensus 195 ---~G~-------~V~~~dr~~~---~----~~-----~~~g~~~~~~l~ell~~--sDvV~l~~Plt~~T~~li~~~~l 250 (345)
T 4g2n_A 195 ---FGL-------AIHYHNRTRL---S----HA-----LEEGAIYHDTLDSLLGA--SDIFLIAAPGRPELKGFLDHDRI 250 (345)
T ss_dssp ---TTC-------EEEEECSSCC---C----HH-----HHTTCEECSSHHHHHHT--CSEEEECSCCCGGGTTCBCHHHH
T ss_pred ---CCC-------EEEEECCCCc---c----hh-----hhcCCeEeCCHHHHHhh--CCEEEEecCCCHHHHHHhCHHHH
Confidence 264 6888887531 0 00 01111113589999987 898884432 2378999999
Q ss_pred HHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCC-C--CcceeCCeeeccCCCCcccccchhhHHHHHhC
Q 007112 457 EAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSP-F--DPVEYNGKVFVPGQGNNAYIFPGLGLGLIISG 533 (617)
Q Consensus 457 ~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wT~GraifASGSP-F--~pv~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~ 533 (617)
+.|. +.-|+.=.|.-..--|-.-.+|+ .+|+.- +.|-. | +| ..+ ..-=+..|+.+-|=+|-...
T Consensus 251 ~~mk---~gailIN~aRG~~vde~aL~~aL--~~g~i~-gA~LDVf~~EP-~~~---~pL~~~~nvilTPHia~~t~--- 317 (345)
T 4g2n_A 251 AKIP---EGAVVINISRGDLINDDALIEAL--RSKHLF-AAGLDVFANEP-AID---PRYRSLDNIFLTPHIGSATH--- 317 (345)
T ss_dssp HHSC---TTEEEEECSCGGGBCHHHHHHHH--HHTSEE-EEEESCCTTTT-SCC---TTGGGCTTEEECCSCTTCBH---
T ss_pred hhCC---CCcEEEECCCCchhCHHHHHHHH--HhCCce-EEEecCCCCCC-CCC---chHHhCCCEEEcCccCcCCH---
Confidence 9995 66788877763322222233343 346643 32321 1 11 000 01124568888887653211
Q ss_pred CcccCHHHHHHHHHHHHhccC
Q 007112 534 AIRVRDEMLLAASEALAAQVT 554 (617)
Q Consensus 534 a~~Itd~M~laAA~aLA~~v~ 554 (617)
.-.+.|...+++-|.....
T Consensus 318 --e~~~~~~~~~~~ni~~~l~ 336 (345)
T 4g2n_A 318 --ETRDAMGWLLIQGIEALNQ 336 (345)
T ss_dssp --HHHHHHHHHHHHHHHHHHT
T ss_pred --HHHHHHHHHHHHHHHHHHc
Confidence 1224566666666666654
No 99
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=88.03 E-value=2.9 Score=43.31 Aligned_cols=109 Identities=16% Similarity=0.253 Sum_probs=73.7
Q ss_pred chhHHHHHHHHHHHHH-------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeE
Q 007112 335 GTASVVLAGILSALKL-------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKI 395 (617)
Q Consensus 335 GTaaV~LAgll~Alr~-------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i 395 (617)
.+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+.. .|+ ++
T Consensus 123 ~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V 190 (333)
T 3ba1_A 123 DVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVAERAEA-----FDC-------PI 190 (333)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHHHHHHHT-----TTC-------CE
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EE
Confidence 3444567777777653 2467899999999999999999998853 264 58
Q ss_pred EEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecC----CCCCCCHHHHHHHHcCCCCcEEEec
Q 007112 396 WLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVEAMASFNEKPVIFAL 471 (617)
Q Consensus 396 ~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaL 471 (617)
+.+|+.. .. ... + ....+|.|+++. .|+++=.-- ..++++++.++.|. +..+|.-.
T Consensus 191 ~~~dr~~----~~---~~g----~----~~~~~l~ell~~--aDvVil~vP~~~~t~~li~~~~l~~mk---~gailIn~ 250 (333)
T 3ba1_A 191 SYFSRSK----KP---NTN----Y----TYYGSVVELASN--SDILVVACPLTPETTHIINREVIDALG---PKGVLINI 250 (333)
T ss_dssp EEECSSC----CT---TCC----S----EEESCHHHHHHT--CSEEEECSCCCGGGTTCBCHHHHHHHC---TTCEEEEC
T ss_pred EEECCCc----hh---ccC----c----eecCCHHHHHhc--CCEEEEecCCChHHHHHhhHHHHhcCC---CCCEEEEC
Confidence 8888752 11 110 1 112578898886 898874421 23688889999885 55677766
Q ss_pred CCCC
Q 007112 472 SNPT 475 (617)
Q Consensus 472 SNPt 475 (617)
|.-.
T Consensus 251 srG~ 254 (333)
T 3ba1_A 251 GRGP 254 (333)
T ss_dssp SCGG
T ss_pred CCCc
Confidence 6643
No 100
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=88.02 E-value=0.73 Score=45.20 Aligned_cols=81 Identities=27% Similarity=0.427 Sum_probs=54.5
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc
Q 007112 342 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH 421 (617)
Q Consensus 342 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~ 421 (617)
.|++.+++..|.++++ +++|+|+|.+|..+|..+.. .|. +++++|++ .++ .......|..
T Consensus 102 ~g~~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~-----~g~-------~v~v~~r~----~~~---~~~l~~~~~~ 161 (263)
T 2d5c_A 102 PGFLEALKAGGIPLKG-PALVLGAGGAGRAVAFALRE-----AGL-------EVWVWNRT----PQR---ALALAEEFGL 161 (263)
T ss_dssp HHHHHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS----HHH---HHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC----HHH---HHHHHHHhcc
Confidence 5888889888889999 99999999999999887754 252 58888875 111 1111112211
Q ss_pred ccCCCCCHHHHHhccCCcEEEeecCCC
Q 007112 422 EHAPIKSLLDAVKAIKPTMLMGTSGVG 448 (617)
Q Consensus 422 ~~~~~~~L~eaV~~vkPtvLIG~S~~~ 448 (617)
. ..++.++ + ++|++|-+...+
T Consensus 162 ~---~~~~~~~-~--~~Divi~~tp~~ 182 (263)
T 2d5c_A 162 R---AVPLEKA-R--EARLLVNATRVG 182 (263)
T ss_dssp E---ECCGGGG-G--GCSEEEECSSTT
T ss_pred c---hhhHhhc-c--CCCEEEEccCCC
Confidence 1 3456666 4 489999766644
No 101
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.00 E-value=0.6 Score=48.82 Aligned_cols=96 Identities=20% Similarity=0.291 Sum_probs=62.1
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcc----cCCCCCH
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE----HAPIKSL 429 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~----~~~~~~L 429 (617)
.+...+++|+|+|..|..+|+.+.. .|. +++.+|++ ..+ +...++.+... .....++
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~-----~Ga-------~V~~~d~~----~~~---l~~~~~~~g~~~~~~~~~~~~l 225 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANG-----MGA-------TVTVLDIN----IDK---LRQLDAEFCGRIHTRYSSAYEL 225 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESC----HHH---HHHHHHHTTTSSEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeCC----HHH---HHHHHHhcCCeeEeccCCHHHH
Confidence 4778999999999999999988754 262 58888874 111 21111112110 0112357
Q ss_pred HHHHhccCCcEEEeecCCC-----CCCCHHHHHHHHcCCCCcEEEecCC
Q 007112 430 LDAVKAIKPTMLMGTSGVG-----KTFTKEVVEAMASFNEKPVIFALSN 473 (617)
Q Consensus 430 ~eaV~~vkPtvLIG~S~~~-----g~Fteevv~~Ma~~~erPIIFaLSN 473 (617)
.+.++. .|++|.+.+.+ .+++++.++.|. +.-+|.=+|-
T Consensus 226 ~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk---~g~~iV~va~ 269 (377)
T 2vhw_A 226 EGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMK---PGAVLVDIAI 269 (377)
T ss_dssp HHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSC---TTCEEEEGGG
T ss_pred HHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCC---CCcEEEEEec
Confidence 788875 89999877655 357899998885 4456666663
No 102
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=87.77 E-value=1.9 Score=44.16 Aligned_cols=112 Identities=19% Similarity=0.178 Sum_probs=67.8
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc
Q 007112 342 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH 421 (617)
Q Consensus 342 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~ 421 (617)
++.+++..+.. ....++.|+|+|..|-.+++.+... .+. ++++++|+. .++ ...+...|..
T Consensus 112 ~s~laa~~la~--~~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~----~~~---a~~la~~~~~ 172 (322)
T 1omo_A 112 AGGIAAKYLAR--KNSSVFGFIGCGTQAYFQLEALRRV----FDI------GEVKAYDVR----EKA---AKKFVSYCED 172 (322)
T ss_dssp HHHHHHHHHSC--TTCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHHH
T ss_pred HHHHHHHhccC--CCCCEEEEEcCcHHHHHHHHHHHHh----CCc------cEEEEECCC----HHH---HHHHHHHHHh
Confidence 44566655532 3567999999999998888877543 233 678888874 222 2333333321
Q ss_pred ---ccCCCCCHHHHHhccCCcEEEeecCCC-CCCCHHHHHHHHcCCCCcEEEecC--CCCCCCCCCHH
Q 007112 422 ---EHAPIKSLLDAVKAIKPTMLMGTSGVG-KTFTKEVVEAMASFNEKPVIFALS--NPTSQSECTAE 483 (617)
Q Consensus 422 ---~~~~~~~L~eaV~~vkPtvLIG~S~~~-g~Fteevv~~Ma~~~erPIIFaLS--NPt~~aEct~e 483 (617)
+.. ..++.|++ . .|++|=++..+ ..|..+. ..+.-.|+.++ +|. +.|+.++
T Consensus 173 ~~~~~~-~~~~~e~v-~--aDvVi~aTp~~~pv~~~~~------l~~G~~V~~ig~~~p~-~~el~~~ 229 (322)
T 1omo_A 173 RGISAS-VQPAEEAS-R--CDVLVTTTPSRKPVVKAEW------VEEGTHINAIGADGPG-KQELDVE 229 (322)
T ss_dssp TTCCEE-ECCHHHHT-S--SSEEEECCCCSSCCBCGGG------CCTTCEEEECSCCSTT-CCCBCHH
T ss_pred cCceEE-ECCHHHHh-C--CCEEEEeeCCCCceecHHH------cCCCeEEEECCCCCCC-ccccCHH
Confidence 112 56899998 4 89998665533 2333322 23456888883 455 6777764
No 103
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=87.76 E-value=0.47 Score=48.63 Aligned_cols=100 Identities=23% Similarity=0.354 Sum_probs=61.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCccc----CCchhchhhhcccC-CCCCHHHH
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKE----SLQHFKKPWAHEHA-PIKSLLDA 432 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~----~L~~~k~~fA~~~~-~~~~L~ea 432 (617)
.||.|+|||..|..+|-+++. .|+ -..++++|.+ .++.+ +|.+.. +|.++.. ...+ .++
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~-----~~~-----~~ev~L~Di~----~~~~~g~~~dl~~~~-~~~~~~~i~~~~-~~a 71 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMAL-----RQT-----ANELVLIDVF----KEKAIGEAMDINHGL-PFMGQMSLYAGD-YSD 71 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-----SSEEEEECCC-------CCHHHHHHTTSC-CCTTCEEEC--C-GGG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCC----hHHHHHHHHHHHHhH-HhcCCeEEEECC-HHH
Confidence 589999999999998887654 244 2579999986 22211 111111 1221100 0123 566
Q ss_pred HhccCCcEEEeecCCCCCC--------------CHHHHHHHHcCCCCcEEEecCCCC
Q 007112 433 VKAIKPTMLMGTSGVGKTF--------------TKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 433 V~~vkPtvLIG~S~~~g~F--------------teevv~~Ma~~~erPIIFaLSNPt 475 (617)
++. .|++|=+.+.+.-- -+++++.|.++++.-+|+=.|||.
T Consensus 72 ~~~--aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv 126 (318)
T 1y6j_A 72 VKD--CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPV 126 (318)
T ss_dssp GTT--CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSH
T ss_pred hCC--CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcH
Confidence 766 89988665554311 168889999889999999999997
No 104
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=87.70 E-value=3.7 Score=41.76 Aligned_cols=109 Identities=18% Similarity=0.228 Sum_probs=74.6
Q ss_pred chhHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEE
Q 007112 335 GTASVVLAGILSALKL------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIW 396 (617)
Q Consensus 335 GTaaV~LAgll~Alr~------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~ 396 (617)
.+|=-+++.+|+..|- .|..|.+.++.|+|.|..|..+|+.+.. .|+ +++
T Consensus 102 ~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~-----~G~-------~V~ 169 (307)
T 1wwk_A 102 SVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIANA-----LGM-------NIL 169 (307)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEE
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHHHHH-----CCC-------EEE
Confidence 3445578888887762 3467999999999999999999998864 264 588
Q ss_pred EEccCCcccCCcccCCchhchhhhcc-cCCCCCHHHHHhccCCcEEEeecC----CCCCCCHHHHHHHHcCCCCcEEEec
Q 007112 397 LVDSKGLIVSSRKESLQHFKKPWAHE-HAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVEAMASFNEKPVIFAL 471 (617)
Q Consensus 397 lvD~~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaL 471 (617)
.+|+.. .. + .+.+ .-...+|.|+++. .|+++=.-- ..++++++.++.|. +.-++.=.
T Consensus 170 ~~d~~~----~~-~--------~~~~~g~~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~mk---~ga~lin~ 231 (307)
T 1wwk_A 170 LYDPYP----NE-E--------RAKEVNGKFVDLETLLKE--SDVVTIHVPLVESTYHLINEERLKLMK---KTAILINT 231 (307)
T ss_dssp EECSSC----CH-H--------HHHHTTCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHHHSC---TTCEEEEC
T ss_pred EECCCC----Ch-h--------hHhhcCccccCHHHHHhh--CCEEEEecCCChHHhhhcCHHHHhcCC---CCeEEEEC
Confidence 888741 11 0 1111 1112379999886 898885422 34678899999885 56687777
Q ss_pred CC
Q 007112 472 SN 473 (617)
Q Consensus 472 SN 473 (617)
|.
T Consensus 232 ar 233 (307)
T 1wwk_A 232 SR 233 (307)
T ss_dssp SC
T ss_pred CC
Confidence 76
No 105
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=87.70 E-value=0.77 Score=49.16 Aligned_cols=124 Identities=11% Similarity=0.163 Sum_probs=76.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHh-ccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhccc---CCCCCHHHHH
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSK-QTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH---APIKSLLDAV 433 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~-~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~---~~~~~L~eaV 433 (617)
.||.|+|||+. ++..++..+.. ..++. -..++|+|.+- +|.+.........++.. ....++.+++
T Consensus 3 ~KI~IIGaG~v---~~~~l~~~l~~~~~~l~----~~el~L~Di~~----~~~~~~~~~~~~~~~~~~~v~~t~d~~~al 71 (417)
T 1up7_A 3 MRIAVIGGGSS---YTPELVKGLLDISEDVR----IDEVIFYDIDE----EKQKIVVDFVKRLVKDRFKVLISDTFEGAV 71 (417)
T ss_dssp CEEEEETTTCT---THHHHHHHHHHHTTTSC----CCEEEEECSCH----HHHHHHHHHHHHHHTTSSEEEECSSHHHHH
T ss_pred CEEEEECCCHH---HHHHHHHHHHhcccCCC----cCEEEEEeCCH----HHHHHHHHHHHHHhhCCeEEEEeCCHHHHh
Confidence 58999999994 66555444443 23442 36799999752 22111111111111111 1125788999
Q ss_pred hccCCcEEEeecCCCC---------------CC-------------------CHHHHHHHHcCCCCcEEEecCCCCCCCC
Q 007112 434 KAIKPTMLMGTSGVGK---------------TF-------------------TKEVVEAMASFNEKPVIFALSNPTSQSE 479 (617)
Q Consensus 434 ~~vkPtvLIG~S~~~g---------------~F-------------------teevv~~Ma~~~erPIIFaLSNPt~~aE 479 (617)
+. .|++|=+.++|+ +. =.++++.|.++| .-+|+-.|||. .
T Consensus 72 ~~--AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~-~A~lin~TNPv--d- 145 (417)
T 1up7_A 72 VD--AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS-NATIVNFTNPS--G- 145 (417)
T ss_dssp TT--CSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECSSSH--H-
T ss_pred CC--CCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC-CEEEEEeCChH--H-
Confidence 98 999998887763 22 358999999999 99999999998 2
Q ss_pred CCHHHHhccccCcEEEeeC
Q 007112 480 CTAEEAYTWSKGQAIFASG 498 (617)
Q Consensus 480 ct~edA~~wT~GraifASG 498 (617)
+..+-+++.+.-.-+|.+|
T Consensus 146 i~t~a~~k~~p~~rviG~c 164 (417)
T 1up7_A 146 HITEFVRNYLEYEKFIGLC 164 (417)
T ss_dssp HHHHHHHHTTCCSSEEECC
T ss_pred HHHHHHHHhCCCCCEEEeC
Confidence 2333455556332455554
No 106
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=87.70 E-value=0.47 Score=48.56 Aligned_cols=107 Identities=13% Similarity=0.216 Sum_probs=66.2
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhh-cccCCCCCHHHHHh
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA-HEHAPIKSLLDAVK 434 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA-~~~~~~~~L~eaV~ 434 (617)
...||.|+|||..|..+|-.|+.. |+ -..++|+|.+-=..++....|.+. .+|. ++..-..+..++++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~-----~~-----~~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~~~~~a~~ 73 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQ-----SI-----VDELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRVKAGEYSDCH 73 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----CS-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEEEECCGGGGT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEEEeCCHHHhC
Confidence 456999999999999988876542 44 257999997510001100112222 2333 11000013367777
Q ss_pred ccCCcEEEeecCCCCCC--------------CHHHHHHHHcCCCCcEEEecCCCC
Q 007112 435 AIKPTMLMGTSGVGKTF--------------TKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 435 ~vkPtvLIG~S~~~g~F--------------teevv~~Ma~~~erPIIFaLSNPt 475 (617)
. .|++|=+.+.+..- =+++++.|.++++.-+|+-.|||.
T Consensus 74 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv 126 (317)
T 3d0o_A 74 D--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPV 126 (317)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred C--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcH
Confidence 6 89988666555321 246777788899999999999997
No 107
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=87.69 E-value=4.5 Score=43.46 Aligned_cols=194 Identities=15% Similarity=0.177 Sum_probs=119.3
Q ss_pred cCCCceeecCc---cchhHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHH
Q 007112 323 SSSHLVFNDDI---QGTASVVLAGILSALKL------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMS 381 (617)
Q Consensus 323 r~~~~~FNDDi---QGTaaV~LAgll~Alr~------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~ 381 (617)
+..+++||--- +.+|=-++|.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 101 ~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~vA~~l~~~-- 178 (416)
T 3k5p_A 101 KRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLAESL-- 178 (416)
T ss_dssp HTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred hcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHHHHHHHHHHHC--
Confidence 35788888643 34566688888888763 25678999999999999999999987543
Q ss_pred hccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecC----CCCCCCHHHHH
Q 007112 382 KQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVE 457 (617)
Q Consensus 382 ~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv~ 457 (617)
|+ +++.+|+..- .... -+ ....+|.|+++. .|+++=.-- .-+.|+++.++
T Consensus 179 ---G~-------~V~~yd~~~~--------~~~~---~~---~~~~sl~ell~~--aDvV~lhvPlt~~T~~li~~~~l~ 232 (416)
T 3k5p_A 179 ---GM-------TVRYYDTSDK--------LQYG---NV---KPAASLDELLKT--SDVVSLHVPSSKSTSKLITEAKLR 232 (416)
T ss_dssp ---TC-------EEEEECTTCC--------CCBT---TB---EECSSHHHHHHH--CSEEEECCCC-----CCBCHHHHH
T ss_pred ---CC-------EEEEECCcch--------hccc---Cc---EecCCHHHHHhh--CCEEEEeCCCCHHHhhhcCHHHHh
Confidence 64 6888887511 1100 01 124689999987 898874321 23689999999
Q ss_pred HHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCC-CC--cceeCCeeecc-CCCCcccccchhhHHHHHhC
Q 007112 458 AMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSP-FD--PVEYNGKVFVP-GQGNNAYIFPGLGLGLIISG 533 (617)
Q Consensus 458 ~Ma~~~erPIIFaLSNPt~~aEct~edA~~wT~GraifASGSP-F~--pv~~~Gk~~~p-~Q~NN~yiFPGiglG~l~s~ 533 (617)
.|. +..++.=.|.-.---|---.+|++ +|+. .+.|-. |+ |..-+.....| =+..|+.+-|=+|-...-+
T Consensus 233 ~mk---~gailIN~aRG~vvd~~aL~~aL~--~g~i-~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea- 305 (416)
T 3k5p_A 233 KMK---KGAFLINNARGSDVDLEALAKVLQ--EGHL-AGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEA- 305 (416)
T ss_dssp HSC---TTEEEEECSCTTSBCHHHHHHHHH--TTSE-EEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHH-
T ss_pred hCC---CCcEEEECCCChhhhHHHHHHHHH--cCCc-cEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHHH-
Confidence 995 677888888754323333334443 5663 333332 22 21101000011 2567899999876432222
Q ss_pred CcccCHHHHHHHHHHHHhccCc
Q 007112 534 AIRVRDEMLLAASEALAAQVTQ 555 (617)
Q Consensus 534 a~~Itd~M~laAA~aLA~~v~~ 555 (617)
-+.|...+++.|.+.+..
T Consensus 306 ----~~~~~~~~~~nl~~~l~~ 323 (416)
T 3k5p_A 306 ----QERIGTEVTRKLVEYSDV 323 (416)
T ss_dssp ----HHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHhh
Confidence 255667777777776643
No 108
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=87.60 E-value=1.3 Score=48.04 Aligned_cols=102 Identities=11% Similarity=0.149 Sum_probs=63.9
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-ccCCCCCHHHH
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDA 432 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~ea 432 (617)
.++..+|.|+|+|..|..+|..|... |. +++++|+. .+ ........+.. ......++.|+
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~~r~----~~---~~~~l~~~~~~~gi~~~~s~~e~ 72 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESR-----GY-------TVSIFNRS----RE---KTEEVIAENPGKKLVPYYTVKEF 72 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSS----HH---HHHHHHHHSTTSCEEECSSHHHH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhC-----CC-------eEEEEeCC----HH---HHHHHHhhCCCCCeEEeCCHHHH
Confidence 35667999999999999999998642 53 57777764 11 12221111100 01123578898
Q ss_pred Hhcc-CCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007112 433 VKAI-KPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 475 (617)
Q Consensus 433 V~~v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 475 (617)
++.. +||++| ++-..+..++++++.+...- +.-||.-+||-.
T Consensus 73 v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 73 VESLETPRRIL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HHTBCSSCEEE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred HhCCCCCCEEE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 8754 478777 55545556888998887544 456888899865
No 109
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=87.26 E-value=0.47 Score=49.27 Aligned_cols=106 Identities=17% Similarity=0.249 Sum_probs=65.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhcc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI 436 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 436 (617)
..||.++|||..|..+|..|+.. |+ -..+.++|.+-=..++-.-+|.+. .+|.....-..+..++++.
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~i~~~~~~a~~~- 76 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLEDA-LPFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGTT-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCChHHHHHHHhhHhhh-hhhcCCcEEEECcHHHhcC-
Confidence 46999999999999999888753 54 257999998410001000013222 1232110001223466766
Q ss_pred CCcEEEeecCCC---C-----CC------CHHHHHHHHcCCCCcEEEecCCCC
Q 007112 437 KPTMLMGTSGVG---K-----TF------TKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 437 kPtvLIG~S~~~---g-----~F------teevv~~Ma~~~erPIIFaLSNPt 475 (617)
.|++|=+.+.+ | +| -+++++.|.++++.-+|+-.|||.
T Consensus 77 -aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPv 128 (326)
T 3vku_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV 128 (326)
T ss_dssp -CSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSSSH
T ss_pred -CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCch
Confidence 88877555443 1 23 358888999999999999999998
No 110
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=87.04 E-value=0.56 Score=46.87 Aligned_cols=49 Identities=27% Similarity=0.306 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 340 VLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 340 ~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
...|++.+++..+.++++.+++|+|||.+|.++|..+. + .| +++++|++
T Consensus 111 d~~G~~~~L~~~~~~l~~k~vlV~GaGgiG~aia~~L~----~-~G--------~V~v~~r~ 159 (287)
T 1nvt_A 111 DGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELA----K-DN--------NIIIANRT 159 (287)
T ss_dssp HHHHHHHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHT----S-SS--------EEEEECSS
T ss_pred CHHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHH----H-CC--------CEEEEECC
Confidence 67899999998888999999999999866666655553 2 23 68888875
No 111
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=86.79 E-value=0.8 Score=47.01 Aligned_cols=104 Identities=19% Similarity=0.285 Sum_probs=65.3
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhh-hcccCCCCCHHHHHhc
Q 007112 358 QTFLFLG-AGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPW-AHEHAPIKSLLDAVKA 435 (617)
Q Consensus 358 ~riv~~G-AGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~f-A~~~~~~~~L~eaV~~ 435 (617)
.||+|.| +|..|..++..|+. .|+ -..++++|.+.- .+...+|.+...+. .+......++.++++.
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~-----~g~-----~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~g 76 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKM-----NPL-----VSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTG 76 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHH-----CTT-----EEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCC
Confidence 5899999 79999998887643 253 256999996421 00000011100000 0000011257888987
Q ss_pred cCCcEEEeecCCCC--------------CCCHHHHHHHHcCCCCcEEEecCCCC
Q 007112 436 IKPTMLMGTSGVGK--------------TFTKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 436 vkPtvLIG~S~~~g--------------~Fteevv~~Ma~~~erPIIFaLSNPt 475 (617)
.|++|=+.+.+. ..+++++++|.+++.+.+|+--|||.
T Consensus 77 --aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv 128 (326)
T 1smk_A 77 --MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPV 128 (326)
T ss_dssp --CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred --CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCch
Confidence 899886665443 24678888888889888999999998
No 112
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=86.47 E-value=4.5 Score=42.26 Aligned_cols=174 Identities=15% Similarity=0.065 Sum_probs=102.1
Q ss_pred CCCceeecCc---cchhHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHH
Q 007112 324 SSHLVFNDDI---QGTASVVLAGILSALKL--------------------VGGTLADQTFLFLGAGEAGTGIAELIALEM 380 (617)
Q Consensus 324 ~~~~~FNDDi---QGTaaV~LAgll~Alr~--------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~ 380 (617)
..+.+.|--- +.+|=-+++-+|+..|- .+..|.+.++.|+|.|..|..+|+.+..
T Consensus 108 ~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~-- 185 (351)
T 3jtm_A 108 AGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKP-- 185 (351)
T ss_dssp TTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGG--
T ss_pred cCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHH--
Confidence 3455555322 23455577888887752 2567999999999999999999998853
Q ss_pred HhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec----CCCCCCCHHHH
Q 007112 381 SKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVV 456 (617)
Q Consensus 381 ~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv 456 (617)
.|+ +++.+|+... . ....+. . ......+|.|+++. .|+++=.- ..-++|+++.+
T Consensus 186 ---~G~-------~V~~~dr~~~----~---~~~~~~-~--g~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 243 (351)
T 3jtm_A 186 ---FGC-------NLLYHDRLQM----A---PELEKE-T--GAKFVEDLNEMLPK--CDVIVINMPLTEKTRGMFNKELI 243 (351)
T ss_dssp ---GCC-------EEEEECSSCC----C---HHHHHH-H--CCEECSCHHHHGGG--CSEEEECSCCCTTTTTCBSHHHH
T ss_pred ---CCC-------EEEEeCCCcc----C---HHHHHh-C--CCeEcCCHHHHHhc--CCEEEECCCCCHHHHHhhcHHHH
Confidence 264 4888887521 0 111100 0 01123589999987 89888432 23468999999
Q ss_pred HHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCccee-CCeeeccCCCCcccccchhhHH
Q 007112 457 EAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEY-NGKVFVPGQGNNAYIFPGLGLG 528 (617)
Q Consensus 457 ~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wT~GraifASGSPF~pv~~-~Gk~~~p~Q~NN~yiFPGiglG 528 (617)
+.|. +..+|.=.|+-..--|---.+|++ +|+.-.|.--=|++--. .... -=+..|+.+-|=++-.
T Consensus 244 ~~mk---~gailIN~aRG~~vde~aL~~aL~--~g~i~ga~lDV~~~EP~~~~~p--L~~~~nvilTPHia~~ 309 (351)
T 3jtm_A 244 GKLK---KGVLIVNNARGAIMERQAVVDAVE--SGHIGGYSGDVWDPQPAPKDHP--WRYMPNQAMTPHTSGT 309 (351)
T ss_dssp HHSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSSCCTTCG--GGTSTTBCCCCSCGGG
T ss_pred hcCC---CCCEEEECcCchhhCHHHHHHHHH--hCCccEEEeCCCCCCCCCCCCh--hhcCCCEEECCcCCCC
Confidence 9995 677888777743223333334443 46654343322221100 0000 0134578888876533
No 113
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=86.46 E-value=1.6 Score=42.09 Aligned_cols=123 Identities=12% Similarity=0.165 Sum_probs=69.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 437 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 437 (617)
.||.|+|+|..|..+|..+... |.. ..++++++|++ . +.+...++.+ ......++.|+++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-----g~~---~~~~V~~~~r~----~---~~~~~~~~~~--g~~~~~~~~e~~~~-- 63 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-----NIV---SSNQIICSDLN----T---ANLKNASEKY--GLTTTTDNNEVAKN-- 63 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----H---HHHHHHHHHH--CCEECSCHHHHHHH--
T ss_pred CeEEEECccHHHHHHHHHHHhC-----CCC---CCCeEEEEeCC----H---HHHHHHHHHh--CCEEeCChHHHHHh--
Confidence 4899999999999999988653 531 12468888874 1 1122222111 11224688999987
Q ss_pred CcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCccee
Q 007112 438 PTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEY 506 (617)
Q Consensus 438 PtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt~~aEct~edA~~wT~GraifASGSPF~pv~~ 506 (617)
+|++| ++..+ --.+++++.+..+. +..+|...++-.+ .+..-++....+-+...-|+.|+..
T Consensus 64 aDvVi-lav~~-~~~~~v~~~l~~~l~~~~~vvs~~~gi~-----~~~l~~~~~~~~~~v~~~p~~p~~~ 126 (247)
T 3gt0_A 64 ADILI-LSIKP-DLYASIINEIKEIIKNDAIIVTIAAGKS-----IESTENAFNKKVKVVRVMPNTPALV 126 (247)
T ss_dssp CSEEE-ECSCT-TTHHHHC---CCSSCTTCEEEECSCCSC-----HHHHHHHHCSCCEEEEEECCGGGGG
T ss_pred CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEecCCCC-----HHHHHHHhCCCCcEEEEeCChHHHH
Confidence 88887 44433 45778888877543 4568877777664 2333333222222233346666643
No 114
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=86.37 E-value=0.48 Score=46.07 Aligned_cols=98 Identities=12% Similarity=0.200 Sum_probs=60.0
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHH
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAV 433 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 433 (617)
++...||.|+|+|..|..+|..+... |. +.++++|++ . +.+......+ ......++.|++
T Consensus 7 ~~~~m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~----~---~~~~~~~~~~--g~~~~~~~~~~~ 66 (266)
T 3d1l_A 7 SIEDTPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRT----E---ESARELAQKV--EAEYTTDLAEVN 66 (266)
T ss_dssp CGGGCCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSS----H---HHHHHHHHHT--TCEEESCGGGSC
T ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCC----H---HHHHHHHHHc--CCceeCCHHHHh
Confidence 45556899999999999999988653 53 247788864 1 1122211111 001124566666
Q ss_pred hccCCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007112 434 KAIKPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 475 (617)
Q Consensus 434 ~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 475 (617)
+. +|++|=+ ..... .+++++.+.... +..+|.-+||-.
T Consensus 67 ~~--~Dvvi~a-v~~~~-~~~v~~~l~~~~~~~~ivv~~s~~~ 105 (266)
T 3d1l_A 67 PY--AKLYIVS-LKDSA-FAELLQGIVEGKREEALMVHTAGSI 105 (266)
T ss_dssp SC--CSEEEEC-CCHHH-HHHHHHHHHTTCCTTCEEEECCTTS
T ss_pred cC--CCEEEEe-cCHHH-HHHHHHHHHhhcCCCcEEEECCCCC
Confidence 54 7888743 33332 388888887644 567888888854
No 115
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=86.29 E-value=3.5 Score=43.12 Aligned_cols=144 Identities=11% Similarity=0.144 Sum_probs=89.7
Q ss_pred eeeecCCCCcH-HHHHHHHcCCCceeecCc---cchhHHHHHHHHHHHHH--------------------hCCCCCCceE
Q 007112 305 IQFEDFANHNA-FELLSKYSSSHLVFNDDI---QGTASVVLAGILSALKL--------------------VGGTLADQTF 360 (617)
Q Consensus 305 IqfEDf~~~~A-f~lL~ryr~~~~~FNDDi---QGTaaV~LAgll~Alr~--------------------~g~~l~d~ri 360 (617)
|+.-..+..|- .+.+.+.+..+.+.|--- +.+|=-+++.+|+..|- .+..|.+.++
T Consensus 88 I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tv 167 (364)
T 2j6i_A 88 VVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTI 167 (364)
T ss_dssp EEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEE
T ss_pred EEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEE
Confidence 55555555542 223333223566666422 34455578888888762 3678999999
Q ss_pred EEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcE
Q 007112 361 LFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTM 440 (617)
Q Consensus 361 v~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtv 440 (617)
.|+|.|..|..+|+.+.. .|+ ++++.+|+... . .... ..+ ......+|.|+++. .|+
T Consensus 168 gIIG~G~IG~~vA~~l~~-----~G~------~~V~~~d~~~~----~---~~~~-~~~--g~~~~~~l~ell~~--aDv 224 (364)
T 2j6i_A 168 ATIGAGRIGYRVLERLVP-----FNP------KELLYYDYQAL----P---KDAE-EKV--GARRVENIEELVAQ--ADI 224 (364)
T ss_dssp EEECCSHHHHHHHHHHGG-----GCC------SEEEEECSSCC----C---HHHH-HHT--TEEECSSHHHHHHT--CSE
T ss_pred EEECcCHHHHHHHHHHHh-----CCC------cEEEEECCCcc----c---hhHH-Hhc--CcEecCCHHHHHhc--CCE
Confidence 999999999999998753 264 33888886421 0 1110 011 00113479999885 899
Q ss_pred EEeecCC----CCCCCHHHHHHHHcCCCCcEEEecCCC
Q 007112 441 LMGTSGV----GKTFTKEVVEAMASFNEKPVIFALSNP 474 (617)
Q Consensus 441 LIG~S~~----~g~Fteevv~~Ma~~~erPIIFaLSNP 474 (617)
++=.--. .++++++.+..|. +.-+|.-.|+-
T Consensus 225 V~l~~P~t~~t~~li~~~~l~~mk---~ga~lIn~arG 259 (364)
T 2j6i_A 225 VTVNAPLHAGTKGLINKELLSKFK---KGAWLVNTARG 259 (364)
T ss_dssp EEECCCCSTTTTTCBCHHHHTTSC---TTEEEEECSCG
T ss_pred EEECCCCChHHHHHhCHHHHhhCC---CCCEEEECCCC
Confidence 8854322 2688888888885 56788878773
No 116
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=86.24 E-value=6 Score=40.36 Aligned_cols=183 Identities=21% Similarity=0.199 Sum_probs=106.5
Q ss_pred CCCceeecCc---cchhHHHHHHHHHHHHH---------------------hCCCCCCceEEEeCcChHHHHHHHHHHHH
Q 007112 324 SSHLVFNDDI---QGTASVVLAGILSALKL---------------------VGGTLADQTFLFLGAGEAGTGIAELIALE 379 (617)
Q Consensus 324 ~~~~~FNDDi---QGTaaV~LAgll~Alr~---------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~ 379 (617)
..+.+.|--- +.+|=-+++.+|+..|- .|..+.+.+|.|+|.|..|..+|+.+..
T Consensus 87 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~- 165 (311)
T 2cuk_A 87 RGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALA- 165 (311)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHH-
T ss_pred CCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHH-
Confidence 3566666432 23444578888887653 1457889999999999999999998864
Q ss_pred HHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec----CCCCCCCHHH
Q 007112 380 MSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEV 455 (617)
Q Consensus 380 ~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteev 455 (617)
.|+ +++.+|+.. .. .. + ...+|.|+++. .|+++=.- ...++++++.
T Consensus 166 ----~G~-------~V~~~d~~~----~~---~~------~----~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~ 215 (311)
T 2cuk_A 166 ----FGM-------RVVYHARTP----KP---LP------Y----PFLSLEELLKE--ADVVSLHTPLTPETHRLLNRER 215 (311)
T ss_dssp ----TTC-------EEEEECSSC----CS---SS------S----CBCCHHHHHHH--CSEEEECCCCCTTTTTCBCHHH
T ss_pred ----CCC-------EEEEECCCC----cc---cc------c----ccCCHHHHHhh--CCEEEEeCCCChHHHhhcCHHH
Confidence 264 588888752 11 11 1 13579999987 89888652 2346788888
Q ss_pred HHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEe----eC-CCCCcceeCCeeeccCCCCcccccchhhHHHH
Q 007112 456 VEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFA----SG-SPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLI 530 (617)
Q Consensus 456 v~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wT~GraifA----SG-SPF~pv~~~Gk~~~p~Q~NN~yiFPGiglG~l 530 (617)
++.|. +..++.=.|.-.---|..-.+|++ |+.--| .+ -|.++ +. .-=+..|..+-|=++-..
T Consensus 216 l~~mk---~ga~lin~srg~~vd~~aL~~aL~---g~i~ga~lDv~~~eP~~~---~~---~L~~~~nviltPh~~~~t- 282 (311)
T 2cuk_A 216 LFAMK---RGAILLNTARGALVDTEALVEALR---GHLFGAGLDVTDPEPLPP---GH---PLYALPNAVITPHIGSAG- 282 (311)
T ss_dssp HTTSC---TTCEEEECSCGGGBCHHHHHHHHT---TTSSEEEESSCSSSSCCT---TS---GGGGCTTEEECCSCTTCB-
T ss_pred HhhCC---CCcEEEECCCCCccCHHHHHHHHh---CcCCEEEEeeCCCCCCCC---CC---hhhhCCCEEECCcCCCCC-
Confidence 87774 677888888733222222334443 331111 11 12111 10 011345788888665321
Q ss_pred HhCCcccCHHHHHHHHHHHHhccC
Q 007112 531 ISGAIRVRDEMLLAASEALAAQVT 554 (617)
Q Consensus 531 ~s~a~~Itd~M~laAA~aLA~~v~ 554 (617)
..-...|...+++.|.....
T Consensus 283 ----~~~~~~~~~~~~~nl~~~~~ 302 (311)
T 2cuk_A 283 ----RTTRERMAEVAVENLLAVLE 302 (311)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHT
T ss_pred ----HHHHHHHHHHHHHHHHHHHc
Confidence 11124566666666666654
No 117
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=86.21 E-value=0.79 Score=47.46 Aligned_cols=106 Identities=17% Similarity=0.304 Sum_probs=65.2
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCC---CCHHH
Q 007112 355 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPI---KSLLD 431 (617)
Q Consensus 355 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~---~~L~e 431 (617)
++..||.|+|||..|.++|.+|+. .|+ + .+.|+|.+-=..++-..+|.+. .+|......+ .+. +
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~-----~~~----~--~v~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~t~d~-~ 71 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGL-----KEL----G--DVVLFDIAEGTPQGKGLDIAES-SPVDGFDAKFTGANDY-A 71 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHHH-HHHHTCCCCEEEESSG-G
T ss_pred CcCCEEEEECCCHHHHHHHHHHHh-----CCC----C--eEEEEeCCchhHHHHHHHHhch-hhhcCCCCEEEEeCCH-H
Confidence 556799999999999999988865 365 2 5999998521111000012221 1122111111 344 7
Q ss_pred HHhccCCcEEEeecCCC---CC-----C------CHHHHHHHHcCCCCcEEEecCCCC
Q 007112 432 AVKAIKPTMLMGTSGVG---KT-----F------TKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 432 aV~~vkPtvLIG~S~~~---g~-----F------teevv~~Ma~~~erPIIFaLSNPt 475 (617)
+++. .|++|=+.+.+ |. | -+++++.|.++++.-+|+-.|||.
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPv 127 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPL 127 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCc
Confidence 7877 89887554433 32 2 156778888899999999999997
No 118
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=86.07 E-value=0.74 Score=47.20 Aligned_cols=73 Identities=15% Similarity=0.293 Sum_probs=44.3
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhccc---CCCCCH
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH---APIKSL 429 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~---~~~~~L 429 (617)
.+|++.||+++|+|..|.-+|+.|+.+ |+ .+|.++|.+= |..+ +|+. + -|..+. .....+
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~a-----GV------G~i~lvD~D~-Ve~s---NL~R-q-~~~~~diG~~Ka~aa 94 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRC-----GI------GKLLLFDYDK-VELA---NMNR-L-FFQPHQAGLSKVQAA 94 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB-C-----------------CCTTSBHHHHH
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHc-----CC------CEEEEECCCc-cChh---hccc-c-cCChhhcCchHHHHH
Confidence 468999999999999999999999876 76 7899999872 2221 3554 2 232110 001245
Q ss_pred HHHHhccCCcEEE
Q 007112 430 LDAVKAIKPTMLM 442 (617)
Q Consensus 430 ~eaV~~vkPtvLI 442 (617)
.+.++.+.|++=|
T Consensus 95 ~~~L~~iNP~v~v 107 (292)
T 3h8v_A 95 EHTLRNINPDVLF 107 (292)
T ss_dssp HHHHHHHCTTSEE
T ss_pred HHHHHhhCCCcEE
Confidence 5666666666554
No 119
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=85.89 E-value=0.72 Score=46.70 Aligned_cols=98 Identities=16% Similarity=0.275 Sum_probs=55.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhch-hhhc----ccCCCCCHHH
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKK-PWAH----EHAPIKSLLD 431 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~-~fA~----~~~~~~~L~e 431 (617)
+.||.|+|+|.-|..+|..|..+ | .+++++|+.. .+.+.+..... .|-. ......++.|
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-----G-------~~V~~~~r~~----~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 77 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-----G-------EEVILWARRK----EIVDLINVSHTSPYVEESKITVRATNDLEE 77 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSH----HHHHHHHHHSCBTTBTTCCCCSEEESCGGG
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCCH----HHHHHHHHhCCcccCCCCeeeEEEeCCHHH
Confidence 47999999999999999998753 5 4688888741 11011111000 0000 0001134555
Q ss_pred HHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCC
Q 007112 432 AVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQ 477 (617)
Q Consensus 432 aV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~ 477 (617)
++. .|++| ++-.+ ...+++++.++. +..+|..++|..+.
T Consensus 78 -~~~--aDvVi-l~vk~-~~~~~v~~~l~~--~~~~vv~~~nGi~~ 116 (335)
T 1z82_A 78 -IKK--EDILV-IAIPV-QYIREHLLRLPV--KPSMVLNLSKGIEI 116 (335)
T ss_dssp -CCT--TEEEE-ECSCG-GGHHHHHTTCSS--CCSEEEECCCCCCT
T ss_pred -hcC--CCEEE-EECCH-HHHHHHHHHhCc--CCCEEEEEeCCCCC
Confidence 443 67655 33222 567777777654 55678888887654
No 120
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=85.88 E-value=0.78 Score=46.80 Aligned_cols=104 Identities=19% Similarity=0.228 Sum_probs=64.9
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhccc--CCCCCHHHHHhcc
Q 007112 359 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH--APIKSLLDAVKAI 436 (617)
Q Consensus 359 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~--~~~~~L~eaV~~v 436 (617)
||.|+|||..|.++|..|+.. |+ -..+.|+|.+-=..++-.-+|.+...+|-.+. ....+ .++++.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~-----~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~- 69 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCC-
Confidence 799999999999999887653 44 24799999752111100001222221121110 00134 678877
Q ss_pred CCcEEEeecCCC---CC-----C------CHHHHHHHHcCCCCcEEEecCCCC
Q 007112 437 KPTMLMGTSGVG---KT-----F------TKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 437 kPtvLIG~S~~~---g~-----F------teevv~~Ma~~~erPIIFaLSNPt 475 (617)
.|++|=+.+.+ |- | -+++++.|.++++.-+|+-.|||.
T Consensus 70 -aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPv 121 (294)
T 1oju_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp -CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred -CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcc
Confidence 89887555444 32 1 256778888999999999999998
No 121
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=85.88 E-value=2.6 Score=43.91 Aligned_cols=95 Identities=13% Similarity=0.212 Sum_probs=61.4
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcc-cCCCCCHHHHH
Q 007112 355 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-HAPIKSLLDAV 433 (617)
Q Consensus 355 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~eaV 433 (617)
++..||.|+|.|..|..+|..|... | -+++++|+. .++ +. .++.. .....++.|++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~-----G-------~~V~v~dr~----~~~---~~----~l~~~g~~~~~s~~e~~ 76 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKG-----G-------HECVVYDLN----VNA---VQ----ALEREGIAGARSIEEFC 76 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC----HHH---HH----HHHTTTCBCCSSHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhC-----C-------CEEEEEeCC----HHH---HH----HHHHCCCEEeCCHHHHH
Confidence 4567999999999999999988753 5 357777764 111 11 12211 12346888988
Q ss_pred hcc-CCcEEEeecCCCCCCCHHHHHHHHcC-CCCcEEEecCCC
Q 007112 434 KAI-KPTMLMGTSGVGKTFTKEVVEAMASF-NEKPVIFALSNP 474 (617)
Q Consensus 434 ~~v-kPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNP 474 (617)
+.. +||++| ++-..+ -.+++++.+... .+.-||.-+||-
T Consensus 77 ~~a~~~DvVi-~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~ 117 (358)
T 4e21_A 77 AKLVKPRVVW-LMVPAA-VVDSMLQRMTPLLAANDIVIDGGNS 117 (358)
T ss_dssp HHSCSSCEEE-ECSCGG-GHHHHHHHHGGGCCTTCEEEECSSC
T ss_pred hcCCCCCEEE-EeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCC
Confidence 874 568877 333333 678888887654 356688877773
No 122
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=85.81 E-value=1 Score=45.28 Aligned_cols=48 Identities=8% Similarity=0.141 Sum_probs=36.5
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 342 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 342 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.|+..+++..|.. .+.+++++|||.+|.+++..|.. .|. ++|+++++.
T Consensus 105 ~G~~~~l~~~~~~-~~~~vlvlGaGgaarav~~~L~~-----~G~------~~i~v~nRt 152 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KNAKVIVHGSGGMAKAVVAAFKN-----SGF------EKLKIYARN 152 (271)
T ss_dssp HHHHHHHHHTTCC-TTSCEEEECSSTTHHHHHHHHHH-----TTC------CCEEEECSC
T ss_pred HHHHHHHHHhCCC-CCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 5666677666654 56899999999999999888754 364 679988874
No 123
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=85.72 E-value=5.9 Score=40.73 Aligned_cols=119 Identities=12% Similarity=0.123 Sum_probs=80.9
Q ss_pred CCCceeecCcc---chhHHHHHHHHHHHHH-------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHH
Q 007112 324 SSHLVFNDDIQ---GTASVVLAGILSALKL-------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMS 381 (617)
Q Consensus 324 ~~~~~FNDDiQ---GTaaV~LAgll~Alr~-------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~ 381 (617)
..+.+.|---. .+|=-+++.+|+..|- .|..|.+.++.|+|.|..|..+|+.+...
T Consensus 91 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-- 168 (331)
T 1xdw_A 91 LGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGVVGLGRIGRVAAQIFHGM-- 168 (331)
T ss_dssp TTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred CCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEEECcCHHHHHHHHHHHHC--
Confidence 45666664322 3445578888888761 23468899999999999999999988642
Q ss_pred hccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEee----cCCCCCCCHHHHH
Q 007112 382 KQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGT----SGVGKTFTKEVVE 457 (617)
Q Consensus 382 ~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~----S~~~g~Fteevv~ 457 (617)
|+ +++.+|+.. .. . +. .++. ..+|.|+++. .|+++=. ....++++++.++
T Consensus 169 ---G~-------~V~~~d~~~----~~-~-~~----~~~~----~~~l~ell~~--aDvV~~~~p~t~~t~~li~~~~l~ 222 (331)
T 1xdw_A 169 ---GA-------TVIGEDVFE----IK-G-IE----DYCT----QVSLDEVLEK--SDIITIHAPYIKENGAVVTRDFLK 222 (331)
T ss_dssp ---TC-------EEEEECSSC----CC-S-CT----TTCE----ECCHHHHHHH--CSEEEECCCCCTTTCCSBCHHHHH
T ss_pred ---CC-------EEEEECCCc----cH-H-HH----hccc----cCCHHHHHhh--CCEEEEecCCchHHHHHhCHHHHh
Confidence 64 588888752 11 1 11 1111 2379999986 8998864 1234689999999
Q ss_pred HHHcCCCCcEEEecCC
Q 007112 458 AMASFNEKPVIFALSN 473 (617)
Q Consensus 458 ~Ma~~~erPIIFaLSN 473 (617)
.|. +.-++.=.|.
T Consensus 223 ~mk---~ga~lin~sr 235 (331)
T 1xdw_A 223 KMK---DGAILVNCAR 235 (331)
T ss_dssp TSC---TTEEEEECSC
T ss_pred hCC---CCcEEEECCC
Confidence 885 5678887774
No 124
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=85.67 E-value=0.93 Score=43.32 Aligned_cols=93 Identities=14% Similarity=0.199 Sum_probs=57.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEE-EccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhcc
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWL-VDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI 436 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~l-vD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 436 (617)
.||.|+|+|..|..+|..+... |. ++.+ +|++ . +.+....+.+- .....+..++++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-----g~-------~V~~v~~r~----~---~~~~~l~~~~g--~~~~~~~~~~~~~- 81 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-----QI-------PAIIANSRG----P---ASLSSVTDRFG--ASVKAVELKDALQ- 81 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-----TC-------CEEEECTTC----G---GGGHHHHHHHT--TTEEECCHHHHTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCC----H---HHHHHHHHHhC--CCcccChHHHHhc-
Confidence 5899999999999999988652 53 3554 5553 1 22322222221 0111244566765
Q ss_pred CCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 007112 437 KPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTS 476 (617)
Q Consensus 437 kPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~ 476 (617)
+|++| ++.. ....+++++.++. .+..+|+.++||..
T Consensus 82 -aDvVi-lavp-~~~~~~v~~~l~~-~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 82 -ADVVI-LAVP-YDSIADIVTQVSD-WGGQIVVDASNAID 117 (220)
T ss_dssp -SSEEE-EESC-GGGHHHHHTTCSC-CTTCEEEECCCCBC
T ss_pred -CCEEE-EeCC-hHHHHHHHHHhhc-cCCCEEEEcCCCCC
Confidence 78877 3333 3456788877765 45669999999984
No 125
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=85.64 E-value=2 Score=38.75 Aligned_cols=98 Identities=13% Similarity=0.090 Sum_probs=55.8
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-ccCCCCCHHHHHh
Q 007112 357 DQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVK 434 (617)
Q Consensus 357 d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~ 434 (617)
..+|+|.|| |-.|..+++.|++ .| .++++++++.- +...+......+.. +..+..++.++++
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~-----~g-------~~V~~~~r~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 66 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQ-----AG-------YEVTVLVRDSS----RLPSEGPRPAHVVVGDVLQAADVDKTVA 66 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEESCGG----GSCSSSCCCSEEEESCTTSHHHHHHHHT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHH-----CC-------CeEEEEEeChh----hcccccCCceEEEEecCCCHHHHHHHHc
Confidence 368999998 8777777777754 25 36888887521 10111011111111 2122246778887
Q ss_pred ccCCcEEEeecCCCCC---------CCHHHHHHHHcCCCCcEEEecC
Q 007112 435 AIKPTMLMGTSGVGKT---------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 435 ~vkPtvLIG~S~~~g~---------Fteevv~~Ma~~~erPIIFaLS 472 (617)
. +|++|=+.+.... -+..++++|.+..-+.|||.=|
T Consensus 67 ~--~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss 111 (206)
T 1hdo_A 67 G--QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (206)
T ss_dssp T--CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred C--CCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence 5 8999988775432 1466777776554455666433
No 126
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=85.62 E-value=5.5 Score=41.51 Aligned_cols=177 Identities=17% Similarity=0.187 Sum_probs=94.5
Q ss_pred chhHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCe
Q 007112 335 GTASVVLAGILSALKL--------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKK 394 (617)
Q Consensus 335 GTaaV~LAgll~Alr~--------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~ 394 (617)
.+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+.. .|+ +
T Consensus 129 ~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~-----~G~-------~ 196 (340)
T 4dgs_A 129 DVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEA-----FGM-------S 196 (340)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------E
T ss_pred hHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHH-----CCC-------E
Confidence 3555677777777652 2467899999999999999999998853 264 5
Q ss_pred EEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecC----CCCCCCHHHHHHHHcCCCCcEEEe
Q 007112 395 IWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVEAMASFNEKPVIFA 470 (617)
Q Consensus 395 i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFa 470 (617)
++.+|+.. .. . . .+ ....+|.|+++. .|+++=.-- .-++++++.++.|. +.-++.=
T Consensus 197 V~~~dr~~----~~-~-~-----~~----~~~~sl~ell~~--aDvVil~vP~t~~t~~li~~~~l~~mk---~gailIN 256 (340)
T 4dgs_A 197 VRYWNRST----LS-G-V-----DW----IAHQSPVDLARD--SDVLAVCVAASAATQNIVDASLLQALG---PEGIVVN 256 (340)
T ss_dssp EEEECSSC----CT-T-S-----CC----EECSSHHHHHHT--CSEEEECC----------CHHHHHHTT---TTCEEEE
T ss_pred EEEEcCCc----cc-c-c-----Cc----eecCCHHHHHhc--CCEEEEeCCCCHHHHHHhhHHHHhcCC---CCCEEEE
Confidence 88888742 11 0 1 01 113589999987 898884322 24678889998885 5668887
Q ss_pred cCCCCCCCCCCHHHHhccccCcEEEeeCCCCC--cceeCCeeeccCCCCcccccchhhHHHHHhCCcccCHHHHHHHHHH
Q 007112 471 LSNPTSQSECTAEEAYTWSKGQAIFASGSPFD--PVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEA 548 (617)
Q Consensus 471 LSNPt~~aEct~edA~~wT~GraifASGSPF~--pv~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~a 548 (617)
.|.-..--|-.-.+|++ +|+.-.|.=-=|+ |.. +. .-=+..|+.+-|=+|-...- -.+.|...+++.
T Consensus 257 ~aRG~vvde~aL~~aL~--~g~i~gA~LDVf~~EP~~-~~---~L~~~~nvilTPHia~~t~e-----~~~~~~~~~~~n 325 (340)
T 4dgs_A 257 VARGNVVDEDALIEALK--SGTIAGAGLDVFVNEPAI-RS---EFHTTPNTVLMPHQGSATVE-----TRMAMGKLVLAN 325 (340)
T ss_dssp CSCC----------------CCSSEEEESCCSSSSSC-CS---HHHHSSSEEECSSCSSCCHH-----HHHHHHHHHHHH
T ss_pred CCCCcccCHHHHHHHHH--cCCceEEEeCCcCCCCCC-cc---chhhCCCEEEcCcCCcCCHH-----HHHHHHHHHHHH
Confidence 87754334444445543 4543222111111 110 00 11234577777766532111 124455556666
Q ss_pred HHhccC
Q 007112 549 LAAQVT 554 (617)
Q Consensus 549 LA~~v~ 554 (617)
|.....
T Consensus 326 l~~~~~ 331 (340)
T 4dgs_A 326 LAAHFA 331 (340)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 655554
No 127
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=85.59 E-value=1 Score=46.76 Aligned_cols=33 Identities=27% Similarity=0.335 Sum_probs=26.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
-.||.|+|||..|.|||..++.+ |+ ++.++|.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~~ 38 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred CCeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 36899999999999999988764 75 57788853
No 128
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=85.47 E-value=0.57 Score=49.22 Aligned_cols=37 Identities=27% Similarity=0.414 Sum_probs=33.1
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+|++.||+++|||..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~a-----GV------g~ItlvD~D 67 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 67 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCC
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHc-----CC------CEEEEecCC
Confidence 46789999999999999999999875 76 789999997
No 129
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=85.29 E-value=0.98 Score=45.92 Aligned_cols=100 Identities=19% Similarity=0.272 Sum_probs=61.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCccc----CCchhchhhhcccC--CCCCHHH
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKE----SLQHFKKPWAHEHA--PIKSLLD 431 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~----~L~~~k~~fA~~~~--~~~~L~e 431 (617)
.||.|+|||..|.++|-.++. .|+ . .++|+|.+ .++-+ +|.+...+...... ...++ +
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~----~--~v~L~Di~----~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~ 66 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KEL----G--DIVLLDIV----EGVPQGKALDLYEASPIEGFDVRVTGTNNY-A 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC----S--EEEEECSS----SSHHHHHHHHHHTTHHHHTCCCCEEEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCC----C--eEEEEeCC----ccHHHHHHHhHHHhHhhcCCCeEEEECCCH-H
Confidence 489999999999999997754 254 1 39999975 22110 12111111111100 01456 6
Q ss_pred HHhccCCcEEEeecCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007112 432 AVKAIKPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 432 aV~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt 475 (617)
+++. .|++|=+.+.+.. .-+++.+.+.++++.-+|+--|||.
T Consensus 67 a~~~--aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv 122 (309)
T 1ur5_A 67 DTAN--SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPL 122 (309)
T ss_dssp GGTT--CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSH
T ss_pred HHCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCch
Confidence 7776 8998866554432 1247788888888888887789998
No 130
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=85.25 E-value=0.78 Score=40.55 Aligned_cols=31 Identities=23% Similarity=0.417 Sum_probs=25.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 359 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 359 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.|+|+|||.||+-.|..|.+ .|+ ++.++|+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~-----~G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 49999999999999998875 375 47788864
No 131
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=85.12 E-value=5.6 Score=40.96 Aligned_cols=91 Identities=13% Similarity=0.165 Sum_probs=60.5
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHH
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDA 432 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ea 432 (617)
..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.. .. + .. ..+ .. ...+|.|+
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~d~~~----~~-~---~~-~~~--g~-~~~~l~e~ 197 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIP-----FGV-------KLYYWSRHR----KV-N---VE-KEL--KA-RYMDIDEL 197 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSSC----CH-H---HH-HHH--TE-EECCHHHH
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEECCCc----ch-h---hh-hhc--Cc-eecCHHHH
Confidence 67999999999999999999998753 253 688888752 11 1 00 111 00 11378898
Q ss_pred HhccCCcEEEeecCC----CCCCCHHHHHHHHcCCCCcEEEecCC
Q 007112 433 VKAIKPTMLMGTSGV----GKTFTKEVVEAMASFNEKPVIFALSN 473 (617)
Q Consensus 433 V~~vkPtvLIG~S~~----~g~Fteevv~~Ma~~~erPIIFaLSN 473 (617)
++. .|+++=.-.. .++++++.++.|. +. ++.-.|.
T Consensus 198 l~~--aDiVil~vp~~~~t~~~i~~~~~~~mk---~g-ilin~sr 236 (333)
T 2d0i_A 198 LEK--SDIVILALPLTRDTYHIINEERVKKLE---GK-YLVNIGR 236 (333)
T ss_dssp HHH--CSEEEECCCCCTTTTTSBCHHHHHHTB---TC-EEEECSC
T ss_pred Hhh--CCEEEEcCCCChHHHHHhCHHHHhhCC---CC-EEEECCC
Confidence 886 8988743222 3578888888884 45 7766663
No 132
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=85.11 E-value=0.73 Score=46.74 Aligned_cols=100 Identities=19% Similarity=0.279 Sum_probs=60.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCC----chhchhhhccc--CCCCCHHHH
Q 007112 359 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESL----QHFKKPWAHEH--APIKSLLDA 432 (617)
Q Consensus 359 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L----~~~k~~fA~~~--~~~~~L~ea 432 (617)
||.|+|||..|.++|..+... ++ -..++++|.+- ++-+.+ .+....+.... ....++.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~-----g~~V~l~D~~~----~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~- 66 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QL-----ARELVLLDVVE----GIPQGKALDMYESGPVGLFDTKVTGSNDYAD- 66 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSS----SHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCh----hHHHHHHHhHHhhhhcccCCcEEEECCCHHH-
Confidence 799999999999999887642 21 25799999862 221111 11100010010 01135544
Q ss_pred HhccCCcEEEeecCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007112 433 VKAIKPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 433 V~~vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt 475 (617)
++. .|++|=+.+.+ |- .-+++.+.|+++++.-+|+-.|||-
T Consensus 67 l~~--aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~ 121 (310)
T 1guz_A 67 TAN--SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPL 121 (310)
T ss_dssp GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSH
T ss_pred HCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCch
Confidence 665 88887554433 22 1157778888888888888899997
No 133
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=85.08 E-value=0.44 Score=47.64 Aligned_cols=104 Identities=17% Similarity=0.243 Sum_probs=60.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCc-hhchhhhccc--CCCCCHHHHHh
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ-HFKKPWAHEH--APIKSLLDAVK 434 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~-~~k~~fA~~~--~~~~~L~eaV~ 434 (617)
.||.|+|||+.|..+|..|... |. ...++++|++---.++ ..+. .+..++..+. ....+. ++++
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~-----g~-----~~~V~l~d~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~-~~~~ 74 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQR-----GI-----AREIVLEDIAKERVEA--EVLDMQHGSSFYPTVSIDGSDDP-EICR 74 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSHHHHHH--HHHHHHHTGGGSTTCEEEEESCG-GGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHHHH--HHHHHHhhhhhcCCeEEEeCCCH-HHhC
Confidence 5899999999999999887542 53 1479999986300000 0010 0111121110 000132 4555
Q ss_pred ccCCcEEEeecCCCCCC--------------CHHHHHHHHcCCCCcEEEecCCCCC
Q 007112 435 AIKPTMLMGTSGVGKTF--------------TKEVVEAMASFNEKPVIFALSNPTS 476 (617)
Q Consensus 435 ~vkPtvLIG~S~~~g~F--------------teevv~~Ma~~~erPIIFaLSNPt~ 476 (617)
. .|++|=+.+.+..- -+++++.|+++++..+|+.++||..
T Consensus 75 ~--aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~ 128 (319)
T 1lld_A 75 D--ADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD 128 (319)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred C--CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchH
Confidence 4 78887555433211 1178888888788889999999984
No 134
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=84.95 E-value=1.1 Score=44.77 Aligned_cols=32 Identities=31% Similarity=0.503 Sum_probs=26.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.||.|+|+|..|.+||..++.+ |. +++++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G~-------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----GH-------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999998753 53 68889874
No 135
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=84.94 E-value=0.96 Score=45.64 Aligned_cols=98 Identities=17% Similarity=0.199 Sum_probs=58.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC--------cccCCcccCCchhchhhhcccCCCCCH
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG--------LIVSSRKESLQHFKKPWAHEHAPIKSL 429 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G--------Li~~~R~~~L~~~k~~fA~~~~~~~~L 429 (617)
.||.|+|+|+-|..+|..|.+. | .+++++|+.- +...++ ....++ + ++.....++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~~~i~~~Gl~~~~~--~~g~~~--~-~~~~~~~~~ 65 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRSDYETVKAKGIRIRSA--TLGDYT--F-RPAAVVRSA 65 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECSTTHHHHHHHCEEEEET--TTCCEE--E-CCSCEESCG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCChHHHHHhCCcEEeec--CCCcEE--E-eeeeeECCH
Confidence 4899999999999999888653 4 4688888753 111110 000000 0 000111345
Q ss_pred HHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 007112 430 LDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPTS 476 (617)
Q Consensus 430 ~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt~ 476 (617)
.++.+ .+|++| ++... ..++++++.++.+- +..+|+.+.|--.
T Consensus 66 ~~~~~--~~DlVi-lavK~-~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 66 AELET--KPDCTL-LCIKV-VEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp GGCSS--CCSEEE-ECCCC-CTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred HHcCC--CCCEEE-EecCC-CChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 44432 478777 55544 34678999987643 4568888999764
No 136
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=84.82 E-value=1.7 Score=47.31 Aligned_cols=98 Identities=13% Similarity=0.164 Sum_probs=59.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhch-hhh-cccCCCCCHHHHHhc
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKK-PWA-HEHAPIKSLLDAVKA 435 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~-~fA-~~~~~~~~L~eaV~~ 435 (617)
.+|.|+|+|..|.++|..|+.. |. +++++|+. .++ +..... ... .......++.|+++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~dr~----~~~---~~~l~~~~~~~~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-----GF-------TVCAYNRT----QSK---VDHFLANEAKGKSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----SHH---HHHHHHTTTTTSSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-----CC-------EEEEEeCC----HHH---HHHHHcccccCCCeEEeCCHHHHHhc
Confidence 4899999999999999998753 64 57888764 111 111111 000 011123578888875
Q ss_pred c-CCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007112 436 I-KPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 475 (617)
Q Consensus 436 v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 475 (617)
+ +||++| ++-..+...+++++.+...- +..||.-+||-.
T Consensus 72 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 72 LKRPRKVM-LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp SCSSCEEE-ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred CCCCCEEE-EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 3 377766 44444445777777776543 346777788743
No 137
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=84.76 E-value=3.7 Score=43.25 Aligned_cols=178 Identities=15% Similarity=0.071 Sum_probs=102.4
Q ss_pred chhHHHHHHHHHHHHH---------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcC
Q 007112 335 GTASVVLAGILSALKL---------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARK 393 (617)
Q Consensus 335 GTaaV~LAgll~Alr~---------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~ 393 (617)
.+|=-+++-+|+..|- .+..|.+.++.|+|.|..|-.+|+.+.. .|+
T Consensus 133 ~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~-----fG~------- 200 (365)
T 4hy3_A 133 PVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSG-----FRA------- 200 (365)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTT-----SCC-------
T ss_pred HHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhh-----CCC-------
Confidence 4455677777777662 2356889999999999999999998743 254
Q ss_pred eEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEee----cCCCCCCCHHHHHHHHcCCCCcEEE
Q 007112 394 KIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGT----SGVGKTFTKEVVEAMASFNEKPVIF 469 (617)
Q Consensus 394 ~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~----S~~~g~Fteevv~~Ma~~~erPIIF 469 (617)
+++.+|+.. .. + . .+...-...+|.|+++. .|+++=. ...-++|+++.+..|. +.-++.
T Consensus 201 ~V~~~d~~~----~~-~---~----~~~~g~~~~~l~ell~~--aDvV~l~~Plt~~T~~li~~~~l~~mk---~gailI 263 (365)
T 4hy3_A 201 RIRVFDPWL----PR-S---M----LEENGVEPASLEDVLTK--SDFIFVVAAVTSENKRFLGAEAFSSMR---RGAAFI 263 (365)
T ss_dssp EEEEECSSS----CH-H---H----HHHTTCEECCHHHHHHS--CSEEEECSCSSCC---CCCHHHHHTSC---TTCEEE
T ss_pred EEEEECCCC----CH-H---H----HhhcCeeeCCHHHHHhc--CCEEEEcCcCCHHHHhhcCHHHHhcCC---CCcEEE
Confidence 577788641 10 0 0 01111113589999987 8998832 3345689999999995 667888
Q ss_pred ecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCcceeCCeeec----cCCCCcccccchhhHHHHHhCCcccCHHHHHHH
Q 007112 470 ALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFV----PGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAA 545 (617)
Q Consensus 470 aLSNPt~~aEct~edA~~wT~GraifASGSPF~pv~~~Gk~~~----p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laA 545 (617)
=.|.-.---|---.+|++ +|+.- | |- +|. ...... -=+..|+.+-|=+|-... .-.+.|...+
T Consensus 264 N~aRG~~vde~aL~~aL~--~g~i~-a-aL---DV~-~~EPl~~~~pL~~~~nvilTPHia~~t~-----e~~~~~~~~~ 330 (365)
T 4hy3_A 264 LLSRADVVDFDALMAAVS--SGHIV-A-AS---DVY-PEEPLPLDHPVRSLKGFIRSAHRAGALD-----SAFKKMGDMV 330 (365)
T ss_dssp ECSCGGGSCHHHHHHHHH--TTSSE-E-EE---SCC-SSSSCCTTCGGGTCTTEEECCSCSSCCH-----HHHHHHHHHH
T ss_pred ECcCCchhCHHHHHHHHH--cCCce-E-Ee---eCC-CCCCCCCCChhhcCCCEEECCccccCHH-----HHHHHHHHHH
Confidence 777643222322333443 56643 3 32 111 000100 114567888887654221 2234555666
Q ss_pred HHHHHhccC
Q 007112 546 SEALAAQVT 554 (617)
Q Consensus 546 A~aLA~~v~ 554 (617)
++-|.....
T Consensus 331 ~~ni~~~~~ 339 (365)
T 4hy3_A 331 LEDMDLMDR 339 (365)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHc
Confidence 666666654
No 138
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=84.61 E-value=0.49 Score=48.82 Aligned_cols=103 Identities=17% Similarity=0.280 Sum_probs=65.1
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCccc----CCchhchhhhcccCCC--CC
Q 007112 355 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKE----SLQHFKKPWAHEHAPI--KS 428 (617)
Q Consensus 355 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~----~L~~~k~~fA~~~~~~--~~ 428 (617)
++..||.|+|||..|.++|..++. .|+ + .+.++|.+- ++.+ +|.+.. ++......+ .+
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~-----~~~----~--~v~l~Di~~----~~~~g~a~dL~~~~-~~~~~~~~v~~t~ 66 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALI-----KQL----G--DVVLFDIAQ----GMPNGKALDLLQTC-PIEGVDFKVRGTN 66 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSS----SHHHHHHHHHHTTH-HHHTCCCCEEEES
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CCC----c--eEEEEeCCh----HHHHHHHHHHHhhh-hhcCCCcEEEEcC
Confidence 345799999999999999988765 265 2 699999862 2211 122211 111111111 12
Q ss_pred HHHHHhccCCcEEEeecCCC---CC-----C------CHHHHHHHHcCCCCcEEEecCCCC
Q 007112 429 LLDAVKAIKPTMLMGTSGVG---KT-----F------TKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 429 L~eaV~~vkPtvLIG~S~~~---g~-----F------teevv~~Ma~~~erPIIFaLSNPt 475 (617)
-.++++. .|++|=+.+.+ |- | -+++++.+.++++.-+|+-.|||.
T Consensus 67 d~~a~~~--aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 125 (321)
T 3p7m_A 67 DYKDLEN--SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPL 125 (321)
T ss_dssp CGGGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred CHHHHCC--CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCch
Confidence 2467776 89887555544 21 1 256778888899888999999997
No 139
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=84.54 E-value=0.35 Score=49.48 Aligned_cols=99 Identities=21% Similarity=0.314 Sum_probs=62.3
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCccc----CCchhchhhhcccCC-CCCHHHHH
Q 007112 359 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKE----SLQHFKKPWAHEHAP-IKSLLDAV 433 (617)
Q Consensus 359 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~----~L~~~k~~fA~~~~~-~~~L~eaV 433 (617)
||.|+|||+.|..+|-+|+.. ++ -..++|+|.+ .++.+ +|.+. .+|.++..- ..+ .+++
T Consensus 2 KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~----~~k~~g~a~dl~~~-~~~~~~~~v~~~~-~~a~ 65 (310)
T 2xxj_A 2 KVGIVGSGMVGSATAYALALL-----GV-----AREVVLVDLD----RKLAQAHAEDILHA-TPFAHPVWVWAGS-YGDL 65 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSS----HHHHHHHHHHHHTT-GGGSCCCEEEECC-GGGG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCC----hhHHHHHHHHHHHh-HhhcCCeEEEECC-HHHh
Confidence 899999999999988876542 43 2589999986 22111 12221 122211000 123 5667
Q ss_pred hccCCcEEEeecCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007112 434 KAIKPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 434 ~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt 475 (617)
+. .|++|=+.+.+.. .-+++++.|.+++..-+|+-.|||.
T Consensus 66 ~~--aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 119 (310)
T 2xxj_A 66 EG--ARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPV 119 (310)
T ss_dssp TT--EEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred CC--CCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCch
Confidence 76 8888855544432 1246777788889999999999998
No 140
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=84.18 E-value=0.98 Score=51.00 Aligned_cols=37 Identities=27% Similarity=0.414 Sum_probs=33.2
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+|++.||+++|||..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 323 kL~~arVLIVGaGGLGs~vA~~La~a-----GV------G~ItLvD~D 359 (615)
T 4gsl_A 323 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 359 (615)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 56789999999999999999999875 76 789999997
No 141
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=84.12 E-value=0.55 Score=48.40 Aligned_cols=104 Identities=18% Similarity=0.270 Sum_probs=63.9
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCC--CCHHHHHhcc
Q 007112 359 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPI--KSLLDAVKAI 436 (617)
Q Consensus 359 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~--~~L~eaV~~v 436 (617)
||.|+|||..|.++|..++.. |+ -+.+.++|.+-=..++-..+|.+. ..+....... .+..++++.
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~~v~~~~~~~a~~~- 69 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-----DV-----AKEVVMVDIKDGMPQGKALDMRES-SPIHGFDTRVTGTNDYGPTED- 69 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----SSEEEEECSSTTHHHHHHHHHHHH-HHHHTCCCEEEEESSSGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCchHHHHHHHHHHhcc-ccccCCCcEEEECCCHHHhCC-
Confidence 799999999999999988754 54 257999998631111100012221 1121111111 134567776
Q ss_pred CCcEEEeecCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007112 437 KPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 437 kPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt 475 (617)
.|++|=+.+.+ |- .-+++++.+.++++.-+|+-.|||.
T Consensus 70 -aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 121 (314)
T 3nep_X 70 -SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPL 121 (314)
T ss_dssp -CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSH
T ss_pred -CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCch
Confidence 88877554443 21 1256778888999999999999997
No 142
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=84.09 E-value=0.64 Score=47.92 Aligned_cols=107 Identities=21% Similarity=0.268 Sum_probs=66.9
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC--cccCCcccCCchhchhhhcccCCC--CCHH
Q 007112 355 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG--LIVSSRKESLQHFKKPWAHEHAPI--KSLL 430 (617)
Q Consensus 355 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G--Li~~~R~~~L~~~k~~fA~~~~~~--~~L~ 430 (617)
.+..||.++|||..|.++|..++.. |+ ..+.++|.+- =..++...+|.+. .++......+ .+-.
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~-----g~------~~v~l~D~~~~~~~~~g~a~dl~~~-~~~~~~~~~i~~t~d~ 73 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQK-----EL------ADVVLVDIPQLENPTKGKALDMLEA-SPVQGFDANIIGTSDY 73 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCGGGHHHHHHHHHHHHHH-HHHHTCCCCEEEESCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEeccchHHHHHHhhhhHHHh-hhhccCCCEEEEcCCH
Confidence 4567999999999999999988752 54 3799999861 1111111113221 2333211111 1124
Q ss_pred HHHhccCCcEEEeecCCC---CC-----C------CHHHHHHHHcCCCCcEEEecCCCC
Q 007112 431 DAVKAIKPTMLMGTSGVG---KT-----F------TKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 431 eaV~~vkPtvLIG~S~~~---g~-----F------teevv~~Ma~~~erPIIFaLSNPt 475 (617)
++++. .|++|=+.+.+ |- | -+++++.++++++.-+|+-.|||.
T Consensus 74 ~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPv 130 (315)
T 3tl2_A 74 ADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPV 130 (315)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChH
Confidence 56766 88887555443 21 2 257888888999999999999997
No 143
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=83.85 E-value=1.1 Score=47.59 Aligned_cols=121 Identities=23% Similarity=0.250 Sum_probs=68.2
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHH
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAV 433 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 433 (617)
.++++||+|+|.|.+|+++|+++.+ .| .++...|.+-.......+.|.....++-..+. .. +.+
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~-----~G-------~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~-~~---~~~ 69 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAK-----LG-------AIVTVNDGKPFDENPTAQSLLEEGIKVVCGSH-PL---ELL 69 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHH-----TT-------CEEEEEESSCGGGCHHHHHHHHTTCEEEESCC-CG---GGG
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHh-----CC-------CEEEEEeCCcccCChHHHHHHhCCCEEEECCC-hH---Hhh
Confidence 4678999999999999999888765 36 46888898531100000112111111110111 11 111
Q ss_pred hccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCcceeCCeeec
Q 007112 434 KAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFV 512 (617)
Q Consensus 434 ~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wT~GraifASGSPF~pv~~~Gk~~~ 512 (617)
+. .+|.+|=.++.+ .=++++.++.. ..-||| +. +|-++...+++.|-.||| ||||-+
T Consensus 70 ~~-~~d~vv~spgi~-~~~p~~~~a~~--~gi~v~-------~~----~e~~~~~~~~~~IaVTGT-------nGKTTT 126 (451)
T 3lk7_A 70 DE-DFCYMIKNPGIP-YNNPMVKKALE--KQIPVL-------TE----VELAYLVSESQLIGITGS-------NGKTTT 126 (451)
T ss_dssp GS-CEEEEEECTTSC-TTSHHHHHHHH--TTCCEE-------CH----HHHHHHHCCSEEEEEECS-------SCHHHH
T ss_pred cC-CCCEEEECCcCC-CCChhHHHHHH--CCCcEE-------eH----HHHHHHhcCCCEEEEECC-------CCHHHH
Confidence 11 168888666665 34677776654 245665 22 334455567788999997 777543
No 144
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=83.85 E-value=1.4 Score=46.40 Aligned_cols=96 Identities=20% Similarity=0.295 Sum_probs=53.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-----------ccCCC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-----------EHAPI 426 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~-----------~~~~~ 426 (617)
.||+|+|||-.|..+|+.|++ .|- .-.++.++|++ .++ +......+.. +..+.
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~-----~g~----~~~~V~v~~r~----~~~---~~~la~~l~~~~~~~~~~~~~D~~d~ 65 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAM-----NRE----VFSHITLASRT----LSK---CQEIAQSIKAKGYGEIDITTVDADSI 65 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----CTT----TCCEEEEEESC----HHH---HHHHHHHHHHTTCCCCEEEECCTTCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC----CceEEEEEECC----HHH---HHHHHHHhhhhcCCceEEEEecCCCH
Confidence 389999998666666665542 231 01478888875 121 2222222211 11122
Q ss_pred CCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007112 427 KSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN 473 (617)
Q Consensus 427 ~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 473 (617)
.++.++++..++|++|=+++. .+..+++++..+.. ..+| -+|+
T Consensus 66 ~~l~~~l~~~~~DvVin~ag~--~~~~~v~~a~l~~g-~~vv-D~a~ 108 (405)
T 4ina_A 66 EELVALINEVKPQIVLNIALP--YQDLTIMEACLRTG-VPYL-DTAN 108 (405)
T ss_dssp HHHHHHHHHHCCSEEEECSCG--GGHHHHHHHHHHHT-CCEE-ESSC
T ss_pred HHHHHHHHhhCCCEEEECCCc--ccChHHHHHHHHhC-CCEE-EecC
Confidence 468889998899999977653 24567776654433 3344 2444
No 145
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=83.75 E-value=0.82 Score=46.68 Aligned_cols=98 Identities=17% Similarity=0.426 Sum_probs=62.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCccc----CCchhchhhhcccCCC---CCHHH
Q 007112 359 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKE----SLQHFKKPWAHEHAPI---KSLLD 431 (617)
Q Consensus 359 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~----~L~~~k~~fA~~~~~~---~~L~e 431 (617)
||.|+|||..|.++|-.++.. |+ ..++|+|.+ .++-+ +|.+...++.+. ..+ .+. +
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-----~l------~el~L~Di~----~~~~~g~~~dl~~~~~~~~~~-~~i~~t~d~-~ 63 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-----GY------DDLLLIART----PGKPQGEALDLAHAAAELGVD-IRISGSNSY-E 63 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSS----TTHHHHHHHHHHHHHHHHTCC-CCEEEESCG-G
T ss_pred CEEEECcCHHHHHHHHHHHhC-----CC------CEEEEEcCC----hhhHHHHHHHHHHhhhhcCCC-eEEEECCCH-H
Confidence 689999999999999777542 54 369999986 22211 121111011111 111 354 6
Q ss_pred HHhccCCcEEEeecCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007112 432 AVKAIKPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 432 aV~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt 475 (617)
+++. .|++|=+.+.+.. .-+++++.|.++++.-+|+-.|||.
T Consensus 64 a~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 119 (308)
T 2d4a_B 64 DMRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPV 119 (308)
T ss_dssp GGTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HhCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCch
Confidence 7776 8999866555531 1357888888888888777789998
No 146
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=83.58 E-value=0.84 Score=45.00 Aligned_cols=37 Identities=24% Similarity=0.395 Sum_probs=31.9
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+|++.||+++|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 28 ~l~~~~VlVvG~Gg~G~~va~~La~~-----Gv------~~i~lvD~d 64 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGLGCAASQYLASA-----GV------GNLTLLDFD 64 (249)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHhCCeEEEEeeCHHHHHHHHHHHHc-----CC------CeEEEEcCC
Confidence 35578999999999999999999865 75 689999997
No 147
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=83.35 E-value=4.1 Score=42.35 Aligned_cols=102 Identities=19% Similarity=0.172 Sum_probs=59.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCccc----CCcc--cCCchhchhhhcccCCCCCHH
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIV----SSRK--ESLQHFKKPWAHEHAPIKSLL 430 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~----~~R~--~~L~~~k~~fA~~~~~~~~L~ 430 (617)
..||.|+|+|+-|..+|..+... | .+++++|++--.. +.+. ..++..+ +........++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~-----G-------~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~--l~~~i~~t~d~~ 94 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK-----G-------QKVRLWSYESDHVDEMQAEGVNNRYLPNYP--FPETLKAYCDLK 94 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT-----T-------CCEEEECSCHHHHHHHHHHSSBTTTBTTCC--CCTTEEEESCHH
T ss_pred CCeEEEECccHHHHHHHHHHHHC-----C-------CeEEEEeCCHHHHHHHHHcCCCcccCCCCc--cCCCeEEECCHH
Confidence 35899999999999999988643 5 3577777741100 0000 0011110 000000125788
Q ss_pred HHHhccCCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 007112 431 DAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPTS 476 (617)
Q Consensus 431 eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt~ 476 (617)
|+++. +|++| ++. +-.+.+++++.++.+. +..+|..++|-..
T Consensus 95 ea~~~--aDvVi-laV-p~~~~~~vl~~i~~~l~~~~ivvs~~kGi~ 137 (356)
T 3k96_A 95 ASLEG--VTDIL-IVV-PSFAFHEVITRMKPLIDAKTRIAWGTKGLA 137 (356)
T ss_dssp HHHTT--CCEEE-ECC-CHHHHHHHHHHHGGGCCTTCEEEECCCSCB
T ss_pred HHHhc--CCEEE-ECC-CHHHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence 88875 77766 333 2236778888877644 4567778888554
No 148
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=83.29 E-value=2 Score=46.21 Aligned_cols=99 Identities=14% Similarity=0.155 Sum_probs=61.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKA 435 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~ 435 (617)
..||.|+|+|..|..+|..+... |. +++++|+. .+ .+...+..+.. ......++.|+++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~-----G~-------~V~v~dr~----~~---~~~~l~~~~~~~gi~~~~s~~e~v~~ 65 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR-----GY-------TVAIYNRT----TS---KTEEVFKEHQDKNLVFTKTLEEFVGS 65 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----HH---HHHHHHHHTTTSCEEECSSHHHHHHT
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC-----CC-------EEEEEcCC----HH---HHHHHHHhCcCCCeEEeCCHHHHHhh
Confidence 36899999999999999988652 53 57777764 11 12222211100 01123578888875
Q ss_pred c-CCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007112 436 I-KPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 475 (617)
Q Consensus 436 v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 475 (617)
. +||++| ++...+...+++++.+...- +..||.-+||-.
T Consensus 66 l~~aDvVi-lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~ 106 (474)
T 2iz1_A 66 LEKPRRIM-LMVQAGAATDATIKSLLPLLDIGDILIDGGNTH 106 (474)
T ss_dssp BCSSCEEE-ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EEccCchHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 3 478877 44444445778888776543 456788888854
No 149
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=83.19 E-value=0.62 Score=38.65 Aligned_cols=88 Identities=15% Similarity=0.141 Sum_probs=51.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKA 435 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~ 435 (617)
..+|+|+|+|..|..+++.+.. .|. .+++++|++ ..+.+.+......+.. +.....++.++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~-----~g~------~~v~~~~r~----~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~- 68 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKT-----SSN------YSVTVADHD----LAALAVLNRMGVATKQVDAKDEAGLAKALG- 68 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----CSS------EEEEEEESC----HHHHHHHHTTTCEEEECCTTCHHHHHHHTT-
T ss_pred cCeEEEECCCHHHHHHHHHHHh-----CCC------ceEEEEeCC----HHHHHHHHhCCCcEEEecCCCHHHHHHHHc-
Confidence 4689999999999999888764 251 368888874 1111111100001100 1111235666766
Q ss_pred cCCcEEEeecCCCCCCCHHHHHHHHcCC
Q 007112 436 IKPTMLMGTSGVGKTFTKEVVEAMASFN 463 (617)
Q Consensus 436 vkPtvLIG~S~~~g~Fteevv~~Ma~~~ 463 (617)
++|++|=+. |..++..+++...+..
T Consensus 69 -~~d~vi~~~--~~~~~~~~~~~~~~~g 93 (118)
T 3ic5_A 69 -GFDAVISAA--PFFLTPIIAKAAKAAG 93 (118)
T ss_dssp -TCSEEEECS--CGGGHHHHHHHHHHTT
T ss_pred -CCCEEEECC--CchhhHHHHHHHHHhC
Confidence 489998665 3356788887776543
No 150
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=83.07 E-value=2.5 Score=40.17 Aligned_cols=79 Identities=13% Similarity=0.220 Sum_probs=49.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHH
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAV 433 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 433 (617)
.+...||.|+|+|..|..+|..+... | .+++++|++ .. ++
T Consensus 16 ~~~~~~I~iiG~G~mG~~la~~l~~~-----g-------~~V~~~~~~--------~~--------------------~~ 55 (209)
T 2raf_A 16 YFQGMEITIFGKGNMGQAIGHNFEIA-----G-------HEVTYYGSK--------DQ--------------------AT 55 (209)
T ss_dssp ----CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECTT--------CC--------------------CS
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEcCC--------HH--------------------Hh
Confidence 45667999999999999999988642 5 368888753 11 22
Q ss_pred hccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 007112 434 KAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTS 476 (617)
Q Consensus 434 ~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~ 476 (617)
+ +.|++| ++.. ...++++++.++...+..+|.-+||+..
T Consensus 56 ~--~aD~vi-~av~-~~~~~~v~~~l~~~~~~~~vi~~~~g~~ 94 (209)
T 2raf_A 56 T--LGEIVI-MAVP-YPALAALAKQYATQLKGKIVVDITNPLN 94 (209)
T ss_dssp S--CCSEEE-ECSC-HHHHHHHHHHTHHHHTTSEEEECCCCBC
T ss_pred c--cCCEEE-EcCC-cHHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 2 356655 2222 2345677777654323678888999653
No 151
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=82.67 E-value=2.1 Score=41.40 Aligned_cols=95 Identities=14% Similarity=0.091 Sum_probs=57.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhc---hhhhcccCCCCCHHHHHhc
Q 007112 359 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFK---KPWAHEHAPIKSLLDAVKA 435 (617)
Q Consensus 359 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k---~~fA~~~~~~~~L~eaV~~ 435 (617)
||.|+|+|..|..+|..+... | .+++++|+.- .+.+.+.... ..+ .......+ .++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~-~~~~~~~~-~~~~~~ 63 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----G-------HEVQGWLRVP----QPYCSVNLVETDGSIF-NESLTAND-PDFLAT 63 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSC----CSEEEEEEECTTSCEE-EEEEEESC-HHHHHT
T ss_pred eEEEECcCHHHHHHHHHHHhC-----C-------CCEEEEEcCc----cceeeEEEEcCCCcee-eeeeeecC-ccccCC
Confidence 799999999999999988653 5 3688888752 2111121100 000 00001123 467765
Q ss_pred cCCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007112 436 IKPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 475 (617)
Q Consensus 436 vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 475 (617)
.|++| ++.... ..+++++.++.+. +..+|..++|..
T Consensus 64 --~d~vi-~~v~~~-~~~~v~~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 64 --SDLLL-VTLKAW-QVSDAVKSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp --CSEEE-ECSCGG-GHHHHHHHHHTTSCTTSCEEEECSSS
T ss_pred --CCEEE-EEecHH-hHHHHHHHHHhhCCCCCEEEEecCCC
Confidence 88877 333332 3689999887643 456777789865
No 152
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=82.56 E-value=3.3 Score=42.93 Aligned_cols=177 Identities=17% Similarity=0.157 Sum_probs=105.6
Q ss_pred hhHHHHHHHHHHHHH----------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEc
Q 007112 336 TASVVLAGILSALKL----------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVD 399 (617)
Q Consensus 336 TaaV~LAgll~Alr~----------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD 399 (617)
+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 170 (324)
T 3hg7_A 103 MSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHF-----GM-------KVLGVS 170 (324)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhC-----CC-------EEEEEc
Confidence 444577777777663 35689999999999999999999998643 64 688888
Q ss_pred cCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEee----cCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007112 400 SKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGT----SGVGKTFTKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 400 ~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~----S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 475 (617)
+.. +. ..... ......+|.|+++. .|+++=. ...-++|+++.++.|. +..++.=.|.-.
T Consensus 171 r~~---~~----~~~~~-----~~~~~~~l~ell~~--aDvV~l~lPlt~~T~~li~~~~l~~mk---~gailIN~aRG~ 233 (324)
T 3hg7_A 171 RSG---RE----RAGFD-----QVYQLPALNKMLAQ--ADVIVSVLPATRETHHLFTASRFEHCK---PGAILFNVGRGN 233 (324)
T ss_dssp SSC---CC----CTTCS-----EEECGGGHHHHHHT--CSEEEECCCCCSSSTTSBCTTTTTCSC---TTCEEEECSCGG
T ss_pred CCh---HH----hhhhh-----cccccCCHHHHHhh--CCEEEEeCCCCHHHHHHhHHHHHhcCC---CCcEEEECCCch
Confidence 764 11 11111 11123578999886 8888743 1224678888887774 667888777633
Q ss_pred CCCCCCHHHHhccccCcEEEe-----eCCCCCcceeCCeeeccCCCCcccccchhhHHHHHhCCcccCHHHHHHHHHHHH
Q 007112 476 SQSECTAEEAYTWSKGQAIFA-----SGSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALA 550 (617)
Q Consensus 476 ~~aEct~edA~~wT~GraifA-----SGSPF~pv~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA 550 (617)
.--|---.+|++ +|+.-.| ..=|.++- . .-=+..|+.+-|=++- .+. ...|...+++-|.
T Consensus 234 ~vde~aL~~aL~--~g~i~ga~lDV~~~EPl~~~----~--pL~~~~nvilTPHia~------~t~-~~~~~~~~~~nl~ 298 (324)
T 3hg7_A 234 AINEGDLLTALR--TGKLGMAVLDVFEQEPLPAD----S--PLWGQPNLIITPHNSA------YSF-PDDVAQIFVRNYI 298 (324)
T ss_dssp GBCHHHHHHHHH--TTSSSEEEESCCSSSSCCTT----C--TTTTCTTEEECCSCSS------CCC-HHHHHHHHHHHHH
T ss_pred hhCHHHHHHHHH--cCCceEEEeccCCCCCCCCC----C--hhhcCCCEEEeCCCcc------ccH-HHHHHHHHHHHHH
Confidence 222222233333 4543111 11122110 0 0013567888887652 222 3567777788877
Q ss_pred hccCcc
Q 007112 551 AQVTQE 556 (617)
Q Consensus 551 ~~v~~~ 556 (617)
....-+
T Consensus 299 ~~~~G~ 304 (324)
T 3hg7_A 299 RFIDGQ 304 (324)
T ss_dssp HHHTTC
T ss_pred HHHcCC
Confidence 776543
No 153
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=82.47 E-value=1.2 Score=50.20 Aligned_cols=38 Identities=26% Similarity=0.404 Sum_probs=33.4
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.+|++.||+++|||..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~a-----GV------G~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTT-----TC------CEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 367789999999999999999999864 76 789999987
No 154
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=82.36 E-value=2.8 Score=42.24 Aligned_cols=111 Identities=10% Similarity=0.155 Sum_probs=63.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCC-cccCCchhch--hhhcc------cCCCC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSS-RKESLQHFKK--PWAHE------HAPIK 427 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~-R~~~L~~~k~--~fA~~------~~~~~ 427 (617)
..||.|+|+|..|..+|..+...-... . ....+++++|++.-.... +.+.+..... .|-.. .....
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~-~----~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQL-A----QFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVP 82 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHC-T----TEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEES
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcc-c----CCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEc
Confidence 468999999999999999997642100 0 001468888875321100 0011111000 01000 00124
Q ss_pred CHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 007112 428 SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPTS 476 (617)
Q Consensus 428 ~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt~ 476 (617)
++.|+++. .|++| ++... ...+++++.++.+. +..+|..++|-..
T Consensus 83 ~~~~~~~~--aD~Vi-lav~~-~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 83 DVVQAAED--ADILI-FVVPH-QFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp SHHHHHTT--CSEEE-ECCCG-GGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred CHHHHHcC--CCEEE-EeCCH-HHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 78888875 88777 44333 47889999887653 4678889999654
No 155
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=82.28 E-value=0.85 Score=46.24 Aligned_cols=110 Identities=15% Similarity=0.109 Sum_probs=66.0
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCc---ccCCcccCCchhchhhhcccCCCCCHHHHH
Q 007112 358 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL---IVSSRKESLQHFKKPWAHEHAPIKSLLDAV 433 (617)
Q Consensus 358 ~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GL---i~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 433 (617)
.||+|.|| |..|.-++..|+. .|.--..-...++++|...- .. +...++.+...+|..+.....++.+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~-g~~~dl~~~~~~~~~di~~~~~~~~a~ 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALE-GVVMELEDCAFPLLAGLEATDDPKVAF 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHH-HHHHHHHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhcc-chhhhhhcccccccCCeEeccChHHHh
Confidence 48999997 9999999888754 24300000136999997420 00 000012111112322222225688888
Q ss_pred hccCCcEEEeecCCCCC--------------CCHHHHHHHHcCC-CCcEEEecCCCC
Q 007112 434 KAIKPTMLMGTSGVGKT--------------FTKEVVEAMASFN-EKPVIFALSNPT 475 (617)
Q Consensus 434 ~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~-erPIIFaLSNPt 475 (617)
+. +|++|=+.+.+.. .|+++++++.+++ .+.+++-.|||.
T Consensus 79 ~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 79 KD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA 133 (327)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch
Confidence 75 9999977776532 3567788888876 666888899996
No 156
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=82.25 E-value=14 Score=38.38 Aligned_cols=194 Identities=13% Similarity=0.138 Sum_probs=111.1
Q ss_pred CCceeecCc---cchhHHHHHHHHHHHHH----------h----------CCCCCCceEEEeCcChHHHHHHHHHHHHHH
Q 007112 325 SHLVFNDDI---QGTASVVLAGILSALKL----------V----------GGTLADQTFLFLGAGEAGTGIAELIALEMS 381 (617)
Q Consensus 325 ~~~~FNDDi---QGTaaV~LAgll~Alr~----------~----------g~~l~d~riv~~GAGsAg~GIA~li~~~~~ 381 (617)
.+.+.|--- +.+|=-+++-+|+..|- . |..|.+.++.|+|.|..|..+|+.+...
T Consensus 93 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~-- 170 (343)
T 2yq5_A 93 NLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAM-- 170 (343)
T ss_dssp -CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred CEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhC--
Confidence 567777532 23455668888877651 2 3468899999999999999999988642
Q ss_pred hccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecC----CCCCCCHHHHH
Q 007112 382 KQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVE 457 (617)
Q Consensus 382 ~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv~ 457 (617)
|+ +++.+|+.. .. . .. ..+ ...+|.|+++. .|+++=.-- .-++|+++.+.
T Consensus 171 ---G~-------~V~~~d~~~----~~-~-~~----~~~----~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l~ 224 (343)
T 2yq5_A 171 ---GA-------KVIAYDVAY----NP-E-FE----PFL----TYTDFDTVLKE--ADIVSLHTPLFPSTENMIGEKQLK 224 (343)
T ss_dssp ---TC-------EEEEECSSC----CG-G-GT----TTC----EECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHH
T ss_pred ---CC-------EEEEECCCh----hh-h-hh----ccc----cccCHHHHHhc--CCEEEEcCCCCHHHHHHhhHHHHh
Confidence 64 688888852 11 0 11 011 12389999987 899885432 24789999999
Q ss_pred HHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCCC--Cccee--C---Ceee-----ccCCCCcccccchh
Q 007112 458 AMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPF--DPVEY--N---GKVF-----VPGQGNNAYIFPGL 525 (617)
Q Consensus 458 ~Ma~~~erPIIFaLSNPt~~aEct~edA~~wT~GraifASGSPF--~pv~~--~---Gk~~-----~p~Q~NN~yiFPGi 525 (617)
.|. +..++.=.|.-..--|---.+|++ +|+.-.|.=-=| +|..+ + ++.. .-=+..|+.+-|=+
T Consensus 225 ~mk---~gailIN~aRg~~vd~~aL~~aL~--~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~nvilTPHi 299 (343)
T 2yq5_A 225 EMK---KSAYLINCARGELVDTGALIKALQ--DGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVVITPHS 299 (343)
T ss_dssp HSC---TTCEEEECSCGGGBCHHHHHHHHH--HTSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCTTEEECSSC
T ss_pred hCC---CCcEEEECCCChhhhHHHHHHHHH--cCCCcEEEecccccCCCccccccccccccccchhHHhcCCCEEECCcc
Confidence 995 677888777633222222233332 343211110011 11000 0 0000 01245688888877
Q ss_pred hHHHHHhCCcccCHHHHHHHHHHHHhccCcc
Q 007112 526 GLGLIISGAIRVRDEMLLAASEALAAQVTQE 556 (617)
Q Consensus 526 glG~l~s~a~~Itd~M~laAA~aLA~~v~~~ 556 (617)
|-. ...--+.|...+++-|......+
T Consensus 300 a~~-----t~ea~~~~~~~~~~ni~~~l~g~ 325 (343)
T 2yq5_A 300 AFY-----TETSIRNMVQICLTDQLTIAKGG 325 (343)
T ss_dssp TTC-----BHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccc-----hHHHHHHHHHHHHHHHHHHHcCC
Confidence 521 12223466667777777666543
No 157
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=82.12 E-value=0.87 Score=46.89 Aligned_cols=88 Identities=19% Similarity=0.324 Sum_probs=53.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc----ccCCCCCHHHHHh
Q 007112 359 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH----EHAPIKSLLDAVK 434 (617)
Q Consensus 359 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~----~~~~~~~L~eaV~ 434 (617)
||+++|||-.|--+|+.|. + ..++.++|... . .+... ++++. +..+..+|.++++
T Consensus 18 kilvlGaG~vG~~~~~~L~----~---------~~~v~~~~~~~----~---~~~~~-~~~~~~~~~d~~d~~~l~~~~~ 76 (365)
T 3abi_A 18 KVLILGAGNIGRAIAWDLK----D---------EFDVYIGDVNN----E---NLEKV-KEFATPLKVDASNFDKLVEVMK 76 (365)
T ss_dssp EEEEECCSHHHHHHHHHHT----T---------TSEEEEEESCH----H---HHHHH-TTTSEEEECCTTCHHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHh----c---------CCCeEEEEcCH----H---HHHHH-hccCCcEEEecCCHHHHHHHHh
Confidence 7999999998877776653 2 13577777641 1 12221 12222 2223346888888
Q ss_pred ccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007112 435 AIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN 473 (617)
Q Consensus 435 ~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 473 (617)
+ .|++|- ..|+-|..+++++-.+...+ ++-+|-
T Consensus 77 ~--~DvVi~--~~p~~~~~~v~~~~~~~g~~--yvD~s~ 109 (365)
T 3abi_A 77 E--FELVIG--ALPGFLGFKSIKAAIKSKVD--MVDVSF 109 (365)
T ss_dssp T--CSEEEE--CCCGGGHHHHHHHHHHHTCE--EEECCC
T ss_pred C--CCEEEE--ecCCcccchHHHHHHhcCcc--eEeeec
Confidence 6 788874 44556888999887654432 455664
No 158
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=81.71 E-value=10 Score=38.56 Aligned_cols=177 Identities=13% Similarity=0.096 Sum_probs=107.1
Q ss_pred chhHHHHHHHHHHHHHh----------------CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEE
Q 007112 335 GTASVVLAGILSALKLV----------------GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLV 398 (617)
Q Consensus 335 GTaaV~LAgll~Alr~~----------------g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lv 398 (617)
.+|=-+++-+|+..|-. ...|.+.+|.|+|.|..|..+|+.+... |+ +++.+
T Consensus 84 ~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~ 151 (290)
T 3gvx_A 84 SVAEHAFALLLAHAKNILENNELMKAGIFRQSPTTLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAY 151 (290)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEE
T ss_pred eHHHHHHHHHHHHHHhhhhhhhHhhhcccccCCceeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEE
Confidence 34445677777766531 1458899999999999999999998753 64 68888
Q ss_pred ccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec----CCCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 007112 399 DSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVVEAMASFNEKPVIFALSNP 474 (617)
Q Consensus 399 D~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSNP 474 (617)
|+.. .. ... + ....+|.|+++. .|+++=.- ..-++++++.++.|. +..+|.=.|.-
T Consensus 152 dr~~----~~---~~~-----~---~~~~~l~ell~~--aDiV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~aRG 211 (290)
T 3gvx_A 152 TRSS----VD---QNV-----D---VISESPADLFRQ--SDFVLIAIPLTDKTRGMVNSRLLANAR---KNLTIVNVARA 211 (290)
T ss_dssp CSSC----CC---TTC-----S---EECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHHHHTTCC---TTCEEEECSCG
T ss_pred eccc----cc---ccc-----c---cccCChHHHhhc--cCeEEEEeeccccchhhhhHHHHhhhh---cCceEEEeehh
Confidence 8752 11 111 1 124589999987 88887432 224678888888885 67788877763
Q ss_pred CCCCCCCHHHHhccccCcEEEeeCCCC--CcceeCCeeeccCCCCcccccchhhHHHHHhCCcccCHHHHHHHHHHHHhc
Q 007112 475 TSQSECTAEEAYTWSKGQAIFASGSPF--DPVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAAQ 552 (617)
Q Consensus 475 t~~aEct~edA~~wT~GraifASGSPF--~pv~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~ 552 (617)
..--|---.+|++ +|+.-.|.=--| +|. ..-=+..|+.+-|=++=| ......+.|...+++-|...
T Consensus 212 ~~vd~~aL~~aL~--~g~i~ga~lDV~~~EP~------~pL~~~~nvilTPHiag~----~t~e~~~~~~~~~~~ni~~~ 279 (290)
T 3gvx_A 212 DVVSKPDMIGFLK--ERSDVWYLSDVWWNEPE------ITETNLRNAILSPHVAGG----MSGEIMDIAIQLAFENVRNF 279 (290)
T ss_dssp GGBCHHHHHHHHH--HCTTCEEEESCCTTTTS------CCSCCCSSEEECCSCSSC----BTTBCCHHHHHHHHHHHHHH
T ss_pred cccCCcchhhhhh--hccceEEeeccccCCcc------cchhhhhhhhcCccccCC----ccchHHHHHHHHHHHHHHhh
Confidence 3222222233433 344332211111 121 111245688888876511 23445677888888888777
Q ss_pred cCc
Q 007112 553 VTQ 555 (617)
Q Consensus 553 v~~ 555 (617)
..-
T Consensus 280 ~~~ 282 (290)
T 3gvx_A 280 FEG 282 (290)
T ss_dssp TC-
T ss_pred hcC
Confidence 653
No 159
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=81.63 E-value=4.2 Score=42.05 Aligned_cols=189 Identities=17% Similarity=0.243 Sum_probs=112.1
Q ss_pred CCCceeecCc---cchhHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHh
Q 007112 324 SSHLVFNDDI---QGTASVVLAGILSALKL------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSK 382 (617)
Q Consensus 324 ~~~~~FNDDi---QGTaaV~LAgll~Alr~------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~ 382 (617)
..+++.|--- +.+|=-+++.+|+..|- .+..|.+.++.|+|.|..|-.+|+.+...
T Consensus 83 ~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~~--- 159 (324)
T 3evt_A 83 AGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKASAL--- 159 (324)
T ss_dssp TTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCccccCCeEEEECcCHHHHHHHHHHHhC---
Confidence 4677777542 33455577788777652 26679999999999999999999988642
Q ss_pred ccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec----CCCCCCCHHHHHH
Q 007112 383 QTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVVEA 458 (617)
Q Consensus 383 ~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~ 458 (617)
|+ +++.+|+..- ..+.+.. .+ ...+|.|+++. .|+++=.- ..-++|+++.+..
T Consensus 160 --G~-------~V~~~dr~~~----~~~~~~~---~~-----~~~~l~ell~~--aDvV~l~lPlt~~t~~li~~~~l~~ 216 (324)
T 3evt_A 160 --GM-------HVIGVNTTGH----PADHFHE---TV-----AFTATADALAT--ANFIVNALPLTPTTHHLFSTELFQQ 216 (324)
T ss_dssp --TC-------EEEEEESSCC----CCTTCSE---EE-----EGGGCHHHHHH--CSEEEECCCCCGGGTTCBSHHHHHT
T ss_pred --CC-------EEEEECCCcc----hhHhHhh---cc-----ccCCHHHHHhh--CCEEEEcCCCchHHHHhcCHHHHhc
Confidence 64 6888887531 1011111 11 12468888887 88887431 2246899999988
Q ss_pred HHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEee-----CCCCCcceeCCeeeccCCCCcccccchhhHHHHHhC
Q 007112 459 MASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFAS-----GSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISG 533 (617)
Q Consensus 459 Ma~~~erPIIFaLSNPt~~aEct~edA~~wT~GraifAS-----GSPF~pv~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~ 533 (617)
|. +..++.=.|.-..--|-.-.+|++ +|+.-.|. .-|.++ +. .-=+..|+.+-|=+|- .
T Consensus 217 mk---~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~~----~~--pL~~~~nvilTPHia~-----~ 280 (324)
T 3evt_A 217 TK---QQPMLINIGRGPAVDTTALMTALD--HHQLSMAALDVTEPEPLPT----DH--PLWQRDDVLITPHISG-----Q 280 (324)
T ss_dssp CC---SCCEEEECSCGGGBCHHHHHHHHH--TTSCSEEEESSCSSSSCCT----TC--GGGGCSSEEECCSCTT-----C
T ss_pred CC---CCCEEEEcCCChhhhHHHHHHHHH--hCCceEEEeCCCCCCCCCC----CC--hhhcCCCEEEcCcccc-----C
Confidence 85 667888777633223333334443 45532221 112111 00 0113567888887652 1
Q ss_pred CcccCHHHHHHHHHHHHhccC
Q 007112 534 AIRVRDEMLLAASEALAAQVT 554 (617)
Q Consensus 534 a~~Itd~M~laAA~aLA~~v~ 554 (617)
...-.+.|...+++-|...+.
T Consensus 281 t~~~~~~~~~~~~~nl~~~l~ 301 (324)
T 3evt_A 281 IAHFRATVFPIFAANFAQFVK 301 (324)
T ss_dssp CCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHh
Confidence 222346677777777777653
No 160
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=81.61 E-value=0.65 Score=48.12 Aligned_cols=102 Identities=16% Similarity=0.228 Sum_probs=65.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCccc----CCchhchhhhcccCC-CCCHHH
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKE----SLQHFKKPWAHEHAP-IKSLLD 431 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~----~L~~~k~~fA~~~~~-~~~L~e 431 (617)
-.||.|+|||..|..+|..|+.. |+ ...+.++|.+ .++.+ +|.+. .+|....-. ..+-.+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~-----~~-----~~~l~l~D~~----~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~ 69 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ-----GI-----TDELVVIDVN----KEKAMGDVMDLNHG-KAFAPQPVKTSYGTYE 69 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSC----HHHHHHHHHHHHHT-GGGSSSCCEEEEECGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEecc----hHHHHHHHHHHHhc-cccccCCeEEEeCcHH
Confidence 36899999999999999988753 54 2589999974 11111 13332 333311000 112235
Q ss_pred HHhccCCcEEEeecCCC---CC-----C------CHHHHHHHHcCCCCcEEEecCCCC
Q 007112 432 AVKAIKPTMLMGTSGVG---KT-----F------TKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 432 aV~~vkPtvLIG~S~~~---g~-----F------teevv~~Ma~~~erPIIFaLSNPt 475 (617)
+++. .|++|=+.+.+ |- | -+++++.+.++++.-+|+-.|||.
T Consensus 70 a~~~--aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPv 125 (326)
T 3pqe_A 70 DCKD--ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPV 125 (326)
T ss_dssp GGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred HhCC--CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChH
Confidence 6765 88877554433 31 1 257788888999999999999998
No 161
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=81.52 E-value=10 Score=38.60 Aligned_cols=117 Identities=20% Similarity=0.209 Sum_probs=78.3
Q ss_pred CCCceeec-Ccc--chhHHHHHHHHHHHHHh-----------------CCCCCCceEEEeCcChHHHHHHHHHHHHHHhc
Q 007112 324 SSHLVFND-DIQ--GTASVVLAGILSALKLV-----------------GGTLADQTFLFLGAGEAGTGIAELIALEMSKQ 383 (617)
Q Consensus 324 ~~~~~FND-DiQ--GTaaV~LAgll~Alr~~-----------------g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~ 383 (617)
..+++.|- +.. .+|=-+++.+|+..|-. +..|.+.++.|+|.|..|..+|+.+..
T Consensus 71 ~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~----- 145 (303)
T 1qp8_A 71 PHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILAA----- 145 (303)
T ss_dssp TTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHHH-----
T ss_pred cCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHHHH-----
Confidence 35666663 332 23334788888876631 236889999999999999999998864
Q ss_pred cCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec----CCCCCCCHHHHHHH
Q 007112 384 TKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVVEAM 459 (617)
Q Consensus 384 ~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~M 459 (617)
.|+ +++.+|+..- + . . .....+|.|+++. .|+++=.- ...++|+++.++.|
T Consensus 146 ~G~-------~V~~~dr~~~------~---~---~----~~~~~~l~ell~~--aDvV~l~~P~~~~t~~~i~~~~l~~m 200 (303)
T 1qp8_A 146 LGA-------QVRGFSRTPK------E---G---P----WRFTNSLEEALRE--ARAAVCALPLNKHTRGLVKYQHLALM 200 (303)
T ss_dssp TTC-------EEEEECSSCC------C---S---S----SCCBSCSHHHHTT--CSEEEECCCCSTTTTTCBCHHHHTTS
T ss_pred CCC-------EEEEECCCcc------c---c---C----cccCCCHHHHHhh--CCEEEEeCcCchHHHHHhCHHHHhhC
Confidence 264 5888887532 0 0 0 1123578888876 88887542 23457888888877
Q ss_pred HcCCCCcEEEecCC
Q 007112 460 ASFNEKPVIFALSN 473 (617)
Q Consensus 460 a~~~erPIIFaLSN 473 (617)
. +..++.=.|.
T Consensus 201 k---~gailin~sr 211 (303)
T 1qp8_A 201 A---EDAVFVNVGR 211 (303)
T ss_dssp C---TTCEEEECSC
T ss_pred C---CCCEEEECCC
Confidence 4 5678887776
No 162
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=81.43 E-value=1.7 Score=46.27 Aligned_cols=96 Identities=18% Similarity=0.321 Sum_probs=49.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHH-hhcCeEEEEccCC-------cccCCccc--CCchhchhhhcccCCCC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIE-EARKKIWLVDSKG-------LIVSSRKE--SLQHFKKPWAHEHAPIK 427 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~e-eAr~~i~lvD~~G-------Li~~~R~~--~L~~~k~~fA~~~~~~~ 427 (617)
.||.|+|||+=|+.+|..+.+.-.. .+.- +-.=++|..|..= .|.+.|.+ .|+..+.| ..-....
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~---~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp--~~i~~t~ 109 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKG---YPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLP--DNLVANP 109 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHH---CTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCC--SSEEEES
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCC---ccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCC--CCcEEeC
Confidence 4999999999999999999875321 1000 0012467655431 12222211 12222211 0001124
Q ss_pred CHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcC
Q 007112 428 SLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASF 462 (617)
Q Consensus 428 ~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~ 462 (617)
+|.|+++. .|++|= ++|-.|.+++++.+..+
T Consensus 110 dl~~al~~--ad~ii~--avPs~~~r~~l~~l~~~ 140 (391)
T 4fgw_A 110 DLIDSVKD--VDIIVF--NIPHQFLPRICSQLKGH 140 (391)
T ss_dssp CHHHHHTT--CSEEEE--CSCGGGHHHHHHHHTTT
T ss_pred CHHHHHhc--CCEEEE--ECChhhhHHHHHHhccc
Confidence 78888876 565541 22334677777777654
No 163
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=81.42 E-value=12 Score=38.76 Aligned_cols=167 Identities=13% Similarity=0.055 Sum_probs=90.6
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHH
Q 007112 352 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLD 431 (617)
Q Consensus 352 g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 431 (617)
|..|.+.+|.|+|.|..|..+|+.+... .|+ +++.+|+..- + ....+ .+ ......+|.|
T Consensus 158 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~----~G~-------~V~~~d~~~~----~---~~~~~-~~--g~~~~~~l~e 216 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAIQKEIARKAVHG----LGM-------KLVYYDVAPA----D---AETEK-AL--GAERVDSLEE 216 (348)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEECSSCC----C---HHHHH-HH--TCEECSSHHH
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHh----cCC-------EEEEECCCCc----c---hhhHh-hc--CcEEeCCHHH
Confidence 5679999999999999999999988522 264 6888887521 1 11111 00 0011247889
Q ss_pred HHhccCCcEEEeecC----CCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCcce-e
Q 007112 432 AVKAIKPTMLMGTSG----VGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVE-Y 506 (617)
Q Consensus 432 aV~~vkPtvLIG~S~----~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wT~GraifASGSPF~pv~-~ 506 (617)
+++. .|+++=.-- ..++++++.++.|. +..+|.-.|.-..--|-.-.+|++ +|+ |.+.|..+-..+ .
T Consensus 217 ll~~--aDvVil~vp~~~~t~~li~~~~l~~mk---~gailin~srg~~vd~~aL~~aL~--~~~-i~gaglDv~~~EP~ 288 (348)
T 2w2k_A 217 LARR--SDCVSVSVPYMKLTHHLIDEAFFAAMK---PGSRIVNTARGPVISQDALIAALK--SGK-LLSAGLDVHEFEPQ 288 (348)
T ss_dssp HHHH--CSEEEECCCCSGGGTTCBCHHHHHHSC---TTEEEEECSCGGGBCHHHHHHHHH--TTS-EEEEEESSCTTTTS
T ss_pred Hhcc--CCEEEEeCCCChHHHHHhhHHHHhcCC---CCCEEEECCCCchhCHHHHHHHHH--hCC-ceEEEeccCCCCCC
Confidence 8886 898875421 23688888888884 556776666532112222334443 455 333343221111 0
Q ss_pred CCeeeccCCCCcccccchhhHHHHHhCCcccCHHHHHHHHHHHHhccC
Q 007112 507 NGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAAQVT 554 (617)
Q Consensus 507 ~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v~ 554 (617)
..... =+..|+.+-|=++-.. ..-...|...+++.|.....
T Consensus 289 ~~~~L--~~~~nviltPH~~~~t-----~e~~~~~~~~~~~ni~~~~~ 329 (348)
T 2w2k_A 289 VSKEL--IEMKHVTLTTHIGGVA-----IETFHEFERLTMTNIDRFLL 329 (348)
T ss_dssp CCHHH--HTSSSEEECCSCTTCS-----HHHHHHHHHHHHHHHHHHHH
T ss_pred CCchh--hcCCCEEEcCcCCCCC-----HHHHHHHHHHHHHHHHHHHc
Confidence 00000 1344677777655221 11223455556666666544
No 164
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=81.35 E-value=2 Score=46.42 Aligned_cols=97 Identities=16% Similarity=0.192 Sum_probs=59.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhh-----cccCCCCCHHHHH
Q 007112 359 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA-----HEHAPIKSLLDAV 433 (617)
Q Consensus 359 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA-----~~~~~~~~L~eaV 433 (617)
||.|+|+|..|..+|..+... |. +++++|+.. ++ +....+.+- .......++.|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~----~~---~~~l~~~~g~~~~~~~i~~~~~~~e~v 63 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-----GF-------KVAVFNRTY----SK---SEEFMKANASAPFAGNLKAFETMEAFA 63 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH----HH---HHHHHHHTTTSTTGGGEEECSCHHHHH
T ss_pred EEEEEChHHHHHHHHHHHHHC-----CC-------EEEEEeCCH----HH---HHHHHHhcCCCCCCCCeEEECCHHHHH
Confidence 699999999999999988653 53 578888641 11 111111100 0011245788888
Q ss_pred hcc-CCcEEEeecCCCCCCCHHHHHHHHcC-CCCcEEEecCCCC
Q 007112 434 KAI-KPTMLMGTSGVGKTFTKEVVEAMASF-NEKPVIFALSNPT 475 (617)
Q Consensus 434 ~~v-kPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNPt 475 (617)
+.+ +||++| ++...+...+++++.+... .+.-||.-+||-.
T Consensus 64 ~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~ 106 (478)
T 1pgj_A 64 ASLKKPRKAL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAH 106 (478)
T ss_dssp HHBCSSCEEE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCC
T ss_pred hcccCCCEEE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 754 488877 4444434567888777643 3456788888854
No 165
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=81.35 E-value=11 Score=39.04 Aligned_cols=129 Identities=17% Similarity=0.128 Sum_probs=84.2
Q ss_pred chhHHHHHHHHHHHHH-------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeE
Q 007112 335 GTASVVLAGILSALKL-------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKI 395 (617)
Q Consensus 335 GTaaV~LAgll~Alr~-------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i 395 (617)
.+|=-+++-+|+..|- .|..|.+.++.|+|.|..|-.+|+.+... |+ ++
T Consensus 100 ~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~-----G~-------~V 167 (334)
T 2pi1_A 100 SVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KV 167 (334)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EE
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHHHHC-----cC-------EE
Confidence 3555678888877752 36679999999999999999999988642 64 68
Q ss_pred EEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec----CCCCCCCHHHHHHHHcCCCCcEEEec
Q 007112 396 WLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVVEAMASFNEKPVIFAL 471 (617)
Q Consensus 396 ~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaL 471 (617)
+.+|+.. . . .. +.......+|.|+++. .|+++=.- ...++|+++.++.|. +.-|+.=.
T Consensus 168 ~~~d~~~----~--~-~~------~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~ 229 (334)
T 2pi1_A 168 LCYDVVK----R--E-DL------KEKGCVYTSLDELLKE--SDVISLHVPYTKETHHMINEERISLMK---DGVYLINT 229 (334)
T ss_dssp EEECSSC----C--H-HH------HHTTCEECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTEEEEEC
T ss_pred EEECCCc----c--h-hh------HhcCceecCHHHHHhh--CCEEEEeCCCChHHHHhhCHHHHhhCC---CCcEEEEC
Confidence 8888752 1 0 10 0111112359999987 89887441 334689999999995 66788877
Q ss_pred CCCCCCCCCCHHHHhccccCcEEE
Q 007112 472 SNPTSQSECTAEEAYTWSKGQAIF 495 (617)
Q Consensus 472 SNPt~~aEct~edA~~wT~Graif 495 (617)
|.-..--|-.-.+|++ +|+.-.
T Consensus 230 aRg~~vd~~aL~~aL~--~g~i~g 251 (334)
T 2pi1_A 230 ARGKVVDTDALYRAYQ--RGKFSG 251 (334)
T ss_dssp SCGGGBCHHHHHHHHH--TTCEEE
T ss_pred CCCcccCHHHHHHHHH--hCCceE
Confidence 7644223333334443 465443
No 166
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=81.34 E-value=4 Score=40.36 Aligned_cols=106 Identities=11% Similarity=0.109 Sum_probs=63.4
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchh----chhhhc-ccCCCCC
Q 007112 355 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHF----KKPWAH-EHAPIKS 428 (617)
Q Consensus 355 l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~----k~~fA~-~~~~~~~ 428 (617)
++..||+|.|| |-.|..+++.|++. |- .-+++.+|+...- .....+... ...+.. +..+..+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g~-----~~~v~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~Dl~d~~~ 89 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQS-----YE-----TYKIINFDALTYS--GNLNNVKSIQDHPNYYFVKGEIQNGEL 89 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHH-----CT-----TEEEEEEECCCTT--CCGGGGTTTTTCTTEEEEECCTTCHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhh-----CC-----CcEEEEEeccccc--cchhhhhhhccCCCeEEEEcCCCCHHH
Confidence 45679999998 88888888888653 52 2367777775321 111112111 111111 1122246
Q ss_pred HHHHHhccCCcEEEeecCCCCCC----------------CHHHHHHHHcCCCCcEEEecC
Q 007112 429 LLDAVKAIKPTMLMGTSGVGKTF----------------TKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 429 L~eaV~~vkPtvLIG~S~~~g~F----------------teevv~~Ma~~~erPIIFaLS 472 (617)
+.++++..++|++|=+.+....- |..+++++.+..-+-+||.=|
T Consensus 90 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 90 LEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp HHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred HHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 88889888899999887754321 367888888776666888644
No 167
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=81.29 E-value=1.7 Score=44.19 Aligned_cols=103 Identities=21% Similarity=0.295 Sum_probs=64.3
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc--CCcccCCcccCCchhchhhhcccCCC----CCHHH
Q 007112 359 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS--KGLIVSSRKESLQHFKKPWAHEHAPI----KSLLD 431 (617)
Q Consensus 359 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~--~GLi~~~R~~~L~~~k~~fA~~~~~~----~~L~e 431 (617)
||+|.|| |..|..++..|+. .|+ ...+.|+|. +-=-.++-..+|.+.. ++....-.+ .++.+
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~-~~~~~~~~i~~~~d~l~~ 70 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPF-----MKDLVLIGREHSINKLEGLREDIYDAL-AGTRSDANIYVESDENLR 70 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTT-----CCEEEEEECGGGHHHHHHHHHHHHHHH-TTSCCCCEEEEEETTCGG
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCC-----CCEEEEEcCCCchhhhHHHHHHHHHhH-HhcCCCeEEEeCCcchHH
Confidence 7999999 9999998887753 243 256999997 3100000000122211 222100011 13678
Q ss_pred HHhccCCcEEEeecCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007112 432 AVKAIKPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 432 aV~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLSNPt 475 (617)
+++. .|++|=+.+.+.. .+++++++|.+++ +.+|+--|||.
T Consensus 71 al~g--aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv 125 (313)
T 1hye_A 71 IIDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV 125 (313)
T ss_dssp GGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH
T ss_pred HhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH
Confidence 8887 8988877665531 3568889999999 99999999997
No 168
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=80.95 E-value=1.6 Score=47.48 Aligned_cols=105 Identities=13% Similarity=0.041 Sum_probs=54.7
Q ss_pred HHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCc---EEEecCCCCCC--------CCCCHHHHhccccCcEEE-eeC
Q 007112 431 DAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKP---VIFALSNPTSQ--------SECTAEEAYTWSKGQAIF-ASG 498 (617)
Q Consensus 431 eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erP---IIFaLSNPt~~--------aEct~edA~~wT~Graif-ASG 498 (617)
++-+.++|+.+|...+.. +. +..|++...+| |..=.=||.+. .+-|.+++++.. +.++ +-|
T Consensus 151 ~l~~~~~~~aIlasnTSs--l~---i~~ia~~~~~p~r~iG~HffnPv~~m~LvEIv~g~~Ts~e~~~~~--~~l~~~lG 223 (460)
T 3k6j_A 151 NLENICKSTCIFGTNTSS--LD---LNEISSVLRDPSNLVGIHFFNPANVIRLVEIIYGSHTSSQAIATA--FQACESIK 223 (460)
T ss_dssp HHHTTSCTTCEEEECCSS--SC---HHHHHTTSSSGGGEEEEECCSSTTTCCEEEEECCSSCCHHHHHHH--HHHHHHTT
T ss_pred HHHhhCCCCCEEEecCCC--hh---HHHHHHhccCCcceEEEEecchhhhCCEEEEEeCCCCCHHHHHHH--HHHHHHhC
Confidence 344456777777543322 22 34556555555 44444567643 122333433321 1111 112
Q ss_pred CCCCcceeCCeeeccCCCCcccccchhhHHHHHhCCcccCHHHHHHHHH
Q 007112 499 SPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASE 547 (617)
Q Consensus 499 SPF~pv~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~ 547 (617)
-.||..+ ..||+.-|-.++|.+.=++.+....-++.+.+.+|.+
T Consensus 224 --k~~v~v~---d~pGfi~Nril~~~~~EA~~l~~~~Ga~~e~ID~a~~ 267 (460)
T 3k6j_A 224 --KLPVLVG---NCKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIIT 267 (460)
T ss_dssp --CEEEEES---SCCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred --CEEEEEe---cccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 1244443 2588888888889888777777233367776666643
No 169
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=80.93 E-value=14 Score=37.94 Aligned_cols=121 Identities=19% Similarity=0.152 Sum_probs=81.3
Q ss_pred CCCceeecCccc---hhHHHHHHHHHHHHH-------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHH
Q 007112 324 SSHLVFNDDIQG---TASVVLAGILSALKL-------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMS 381 (617)
Q Consensus 324 ~~~~~FNDDiQG---TaaV~LAgll~Alr~-------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~ 381 (617)
..+.+.|---.. +|=-+++.+|+..|- .|..|.+.++.|+|.|..|..+|+.+...
T Consensus 90 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-- 167 (333)
T 1dxy_A 90 YGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKGF-- 167 (333)
T ss_dssp TTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHHC--
Confidence 456777643333 344478888887651 34678999999999999999999988642
Q ss_pred hccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecC----CCCCCCHHHHH
Q 007112 382 KQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVE 457 (617)
Q Consensus 382 ~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv~ 457 (617)
|+ +++.+|+.. .. . .. .++. ..+|.|+++. .|+++=.-. ..++|+++.++
T Consensus 168 ---G~-------~V~~~d~~~----~~-~-~~----~~~~----~~~l~ell~~--aDvV~~~~P~~~~t~~li~~~~l~ 221 (333)
T 1dxy_A 168 ---GA-------KVIAYDPYP----MK-G-DH----PDFD----YVSLEDLFKQ--SDVIDLHVPGIEQNTHIINEAAFN 221 (333)
T ss_dssp ---TC-------EEEEECSSC----CS-S-CC----TTCE----ECCHHHHHHH--CSEEEECCCCCGGGTTSBCHHHHH
T ss_pred ---CC-------EEEEECCCc----ch-h-hH----hccc----cCCHHHHHhc--CCEEEEcCCCchhHHHHhCHHHHh
Confidence 64 588888752 11 1 11 1121 2379999986 898885422 23678999999
Q ss_pred HHHcCCCCcEEEecCCCC
Q 007112 458 AMASFNEKPVIFALSNPT 475 (617)
Q Consensus 458 ~Ma~~~erPIIFaLSNPt 475 (617)
.|. +.-++.=.|.-.
T Consensus 222 ~mk---~ga~lIn~srg~ 236 (333)
T 1dxy_A 222 LMK---PGAIVINTARPN 236 (333)
T ss_dssp HSC---TTEEEEECSCTT
T ss_pred hCC---CCcEEEECCCCc
Confidence 985 566777777633
No 170
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=80.59 E-value=1.4 Score=46.03 Aligned_cols=38 Identities=24% Similarity=0.469 Sum_probs=33.1
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.+|++.||+++|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~a-----Gv------g~i~lvD~D 151 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATS-----GI------GEIILIDND 151 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEEECC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhC-----CC------CeEEEECCC
Confidence 346789999999999999999999875 76 789999986
No 171
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=80.52 E-value=1.5 Score=44.48 Aligned_cols=100 Identities=17% Similarity=0.199 Sum_probs=57.9
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc
Q 007112 342 AGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH 421 (617)
Q Consensus 342 Agll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~ 421 (617)
.|++.+++..| +.+++|+|||.+|.+|+..|... | .+|+++++. .++.+.|. .+.-
T Consensus 107 ~Gf~~~L~~~~----~k~vlvlGaGGaaraia~~L~~~-----G-------~~v~V~nRt----~~ka~~la----~~~~ 162 (269)
T 3phh_A 107 LGFYLSLKQKN----YQNALILGAGGSAKALACELKKQ-----G-------LQVSVLNRS----SRGLDFFQ----RLGC 162 (269)
T ss_dssp HHHHHHCC-------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS----CTTHHHHH----HHTC
T ss_pred HHHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC----HHHHHHHH----HCCC
Confidence 45666665544 88999999999999888887653 4 578988885 33322222 1110
Q ss_pred ccCCCCCHHHHHhccCCcEEEeecCCC----CCCCHHHHH-HHHcCCCCcEEEecC-CC
Q 007112 422 EHAPIKSLLDAVKAIKPTMLMGTSGVG----KTFTKEVVE-AMASFNEKPVIFALS-NP 474 (617)
Q Consensus 422 ~~~~~~~L~eaV~~vkPtvLIG~S~~~----g~Fteevv~-~Ma~~~erPIIFaLS-NP 474 (617)
......+|. ++|++|-++..| -.+.++.+. .+. +..+++=++ ||
T Consensus 163 ~~~~~~~l~------~~DiVInaTp~Gm~~~~~l~~~~l~~~l~---~~~~v~D~vY~P 212 (269)
T 3phh_A 163 DCFMEPPKS------AFDLIINATSASLHNELPLNKEVLKGYFK---EGKLAYDLAYGF 212 (269)
T ss_dssp EEESSCCSS------CCSEEEECCTTCCCCSCSSCHHHHHHHHH---HCSEEEESCCSS
T ss_pred eEecHHHhc------cCCEEEEcccCCCCCCCCCChHHHHhhCC---CCCEEEEeCCCC
Confidence 101122221 689999776654 146777554 343 345666553 44
No 172
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=80.49 E-value=17 Score=38.59 Aligned_cols=191 Identities=15% Similarity=0.118 Sum_probs=109.2
Q ss_pred CCCceeecCc---cchhHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHh
Q 007112 324 SSHLVFNDDI---QGTASVVLAGILSALKL------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSK 382 (617)
Q Consensus 324 ~~~~~FNDDi---QGTaaV~LAgll~Alr~------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~ 382 (617)
..+++||--- +.+|=-++|.+|+..|- .|..|.+.++.|+|-|..|..+|+.+...
T Consensus 91 ~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l~~~--- 167 (404)
T 1sc6_A 91 RGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESL--- 167 (404)
T ss_dssp TTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHHHHHHHC---
Confidence 4677887543 34555688999988773 25679999999999999999999988642
Q ss_pred ccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec----CCCCCCCHHHHHH
Q 007112 383 QTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVVEA 458 (617)
Q Consensus 383 ~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~ 458 (617)
|+ +++.+|+..- ..+. -+ ....+|.|+++. .|+++=.- ..-++|+++.+..
T Consensus 168 --G~-------~V~~~d~~~~------~~~~-----~~---~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 222 (404)
T 1sc6_A 168 --GM-------YVYFYDIENK------LPLG-----NA---TQVQHLSDLLNM--SDVVSLHVPENPSTKNMMGAKEISL 222 (404)
T ss_dssp --TC-------EEEEECSSCC------CCCT-----TC---EECSCHHHHHHH--CSEEEECCCSSTTTTTCBCHHHHHH
T ss_pred --CC-------EEEEEcCCch------hccC-----Cc---eecCCHHHHHhc--CCEEEEccCCChHHHHHhhHHHHhh
Confidence 64 5888887421 1010 01 123578898887 88887442 2236888999988
Q ss_pred HHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEe-----eCCCCCcceeCCeeeccCCCCcccccchhhHHHHHhC
Q 007112 459 MASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFA-----SGSPFDPVEYNGKVFVPGQGNNAYIFPGLGLGLIISG 533 (617)
Q Consensus 459 Ma~~~erPIIFaLSNPt~~aEct~edA~~wT~GraifA-----SGSPF~pv~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~ 533 (617)
|. +.-++.=.|.=.---|---.+|++ +|+.--| ..-|.++=+.- ...-=+..|+.+-|=+|-...-
T Consensus 223 mk---~ga~lIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDVf~~EP~~~~~~~--~~pL~~~~nvilTPHi~~~T~e-- 293 (404)
T 1sc6_A 223 MK---PGSLLINASRGTVVDIPALADALA--SKHLAGAAIDVFPTEPATNSDPF--TSPLAEFDNVLLTPHIGGSTQE-- 293 (404)
T ss_dssp SC---TTEEEEECSCSSSBCHHHHHHHHH--TTSEEEEEEEC---------CTT--TGGGTTCTTEEEECCCSCCSHH--
T ss_pred cC---CCeEEEECCCChHHhHHHHHHHHH--cCCccEEEEeecCCCCCCccccc--cchhhcCCCEEECCCCCCCcHH--
Confidence 85 566777777532111211223333 4553211 11121100000 0001135588888877632222
Q ss_pred CcccCHHHHHHHHHHHHhccC
Q 007112 534 AIRVRDEMLLAASEALAAQVT 554 (617)
Q Consensus 534 a~~Itd~M~laAA~aLA~~v~ 554 (617)
--+.|...+++.|.+...
T Consensus 294 ---a~~~~~~~~~~nl~~~l~ 311 (404)
T 1sc6_A 294 ---AQENIGLEVAGKLIKYSD 311 (404)
T ss_dssp ---HHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHc
Confidence 123455666677666654
No 173
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=80.09 E-value=1.4 Score=42.06 Aligned_cols=96 Identities=15% Similarity=0.168 Sum_probs=55.8
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHH
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDA 432 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ea 432 (617)
+|-...||.|+|+|..|..+|..+.. .|. +++++|++ .++ +.. ++...-...++.++
T Consensus 24 ~~~~~~~I~iiG~G~~G~~la~~l~~-----~g~-------~V~~~~r~----~~~---~~~----~~~~g~~~~~~~~~ 80 (215)
T 2vns_A 24 VPDEAPKVGILGSGDFARSLATRLVG-----SGF-------KVVVGSRN----PKR---TAR----LFPSAAQVTFQEEA 80 (215)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS----HHH---HHH----HSBTTSEEEEHHHH
T ss_pred CCCCCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCC----HHH---HHH----HHHcCCceecHHHH
Confidence 33345689999999999999998864 253 58888864 111 111 11111011268888
Q ss_pred HhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 007112 433 VKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTS 476 (617)
Q Consensus 433 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~ 476 (617)
++. +|++|=+ ..+. ..+++++ ++...+.-+|.-+||+..
T Consensus 81 ~~~--~DvVi~a-v~~~-~~~~v~~-l~~~~~~~~vv~~s~g~~ 119 (215)
T 2vns_A 81 VSS--PEVIFVA-VFRE-HYSSLCS-LSDQLAGKILVDVSNPTE 119 (215)
T ss_dssp TTS--CSEEEEC-SCGG-GSGGGGG-GHHHHTTCEEEECCCCCH
T ss_pred HhC--CCEEEEC-CChH-HHHHHHH-HHHhcCCCEEEEeCCCcc
Confidence 875 8988833 3332 3455554 333235668889999873
No 174
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=80.08 E-value=7.1 Score=41.53 Aligned_cols=183 Identities=12% Similarity=0.046 Sum_probs=101.1
Q ss_pred chhHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCe
Q 007112 335 GTASVVLAGILSALKL--------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKK 394 (617)
Q Consensus 335 GTaaV~LAgll~Alr~--------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~ 394 (617)
.+|=-+++-+|+..|- .+..|.+.++.|+|.|..|..+|+.+.. .|+ +
T Consensus 149 ~VAE~al~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~a-----~G~-------~ 216 (393)
T 2nac_A 149 SVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAP-----FDV-------H 216 (393)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCTTCEEEEECCSHHHHHHHHHHGG-----GTC-------E
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHcCCCCccccccCCccCCCCEEEEEeECHHHHHHHHHHHh-----CCC-------E
Confidence 3445567777777652 2567999999999999999999998753 253 5
Q ss_pred EEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec----CCCCCCCHHHHHHHHcCCCCcEEEe
Q 007112 395 IWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVVEAMASFNEKPVIFA 470 (617)
Q Consensus 395 i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFa 470 (617)
++.+|+.. .. .... ..+ ......+|.|+++. .|+++=.- ...++|+++.++.|. +.-+|.=
T Consensus 217 V~~~d~~~----~~---~~~~-~~~--G~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l~~mk---~gailIN 281 (393)
T 2nac_A 217 LHYTDRHR----LP---ESVE-KEL--NLTWHATREDMYPV--CDVVTLNCPLHPETEHMINDETLKLFK---RGAYIVN 281 (393)
T ss_dssp EEEECSSC----CC---HHHH-HHH--TCEECSSHHHHGGG--CSEEEECSCCCTTTTTCBSHHHHTTSC---TTEEEEE
T ss_pred EEEEcCCc----cc---hhhH-hhc--CceecCCHHHHHhc--CCEEEEecCCchHHHHHhhHHHHhhCC---CCCEEEE
Confidence 78888642 11 1100 001 00112478898886 89888542 224688898888885 5678887
Q ss_pred cCCCCCCCCCCHHHHhccccCcEEEeeCCCCC--cceeCCeeeccCCCCcccccchhhHHHHHhCCcccCHHHHHHHHHH
Q 007112 471 LSNPTSQSECTAEEAYTWSKGQAIFASGSPFD--PVEYNGKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEA 548 (617)
Q Consensus 471 LSNPt~~aEct~edA~~wT~GraifASGSPF~--pv~~~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~a 548 (617)
.|.-.---|-.-.+|++ +|+.--|.--=|. |.. .+..+ =+..|+.+-|=++-...-+ ...|...+++-
T Consensus 282 ~aRG~~vde~aL~~aL~--~g~i~gA~lDV~~~EP~~-~~~pL--~~~~nvilTPHia~~T~e~-----~~~~~~~~~~n 351 (393)
T 2nac_A 282 TARGKLCDRDAVARALE--SGRLAGYAGDVWFPQPAP-KDHPW--RTMPYNGMTPHISGTTLTA-----QARYAAGTREI 351 (393)
T ss_dssp CSCGGGBCHHHHHHHHH--TTSEEEEEESCCSSSSCC-TTCGG--GTSTTBCCCCSCTTCSHHH-----HHHHHHHHHHH
T ss_pred CCCchHhhHHHHHHHHH--cCCeeEEEEEecCCCCCC-CCChh--HcCCCEEECCCCCcCcHHH-----HHHHHHHHHHH
Confidence 77532112212233333 4653333211111 110 00100 1356888888776422211 23345555566
Q ss_pred HHhccC
Q 007112 549 LAAQVT 554 (617)
Q Consensus 549 LA~~v~ 554 (617)
|.....
T Consensus 352 l~~~~~ 357 (393)
T 2nac_A 352 LECFFE 357 (393)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 655543
No 175
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=79.66 E-value=0.98 Score=42.13 Aligned_cols=94 Identities=15% Similarity=0.146 Sum_probs=59.2
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhh---c--ccCCCCCHHHH
Q 007112 359 TFLFLG-AGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA---H--EHAPIKSLLDA 432 (617)
Q Consensus 359 riv~~G-AGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA---~--~~~~~~~L~ea 432 (617)
||+|+| +|..|..+|..+.. .| .+++++|++ .++ ....++.+. . +.. ..++.++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~-----~g-------~~V~~~~r~----~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~ 61 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT-----LG-------HEIVVGSRR----EEK---AEAKAAEYRRIAGDASIT-GMKNEDA 61 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEESS----HHH---HHHHHHHHHHHHSSCCEE-EEEHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHH-----CC-------CEEEEEeCC----HHH---HHHHHHHhccccccCCCC-hhhHHHH
Confidence 799999 99999999988754 25 368888874 111 111111111 0 011 2478888
Q ss_pred HhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 007112 433 VKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTS 476 (617)
Q Consensus 433 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~ 476 (617)
++. .|++|=+.. + -..+++++.+....+..+|.-++|+.+
T Consensus 62 ~~~--~D~Vi~~~~-~-~~~~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 62 AEA--CDIAVLTIP-W-EHAIDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp HHH--CSEEEECSC-H-HHHHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred Hhc--CCEEEEeCC-h-hhHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 886 898884433 3 236678777654334678999999774
No 176
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=79.36 E-value=4.8 Score=41.36 Aligned_cols=192 Identities=13% Similarity=0.074 Sum_probs=112.1
Q ss_pred CCCceeec--C--ccchhHHHHHHHHHHHHH----------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHhc
Q 007112 324 SSHLVFND--D--IQGTASVVLAGILSALKL----------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQ 383 (617)
Q Consensus 324 ~~~~~FND--D--iQGTaaV~LAgll~Alr~----------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~ 383 (617)
..+++.|- - -+.+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+..
T Consensus 86 ~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~----- 160 (315)
T 3pp8_A 86 ASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQA----- 160 (315)
T ss_dssp TTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHT-----
T ss_pred CCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHH-----
Confidence 35666652 1 144566778888888763 2567899999999999999999998854
Q ss_pred cCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec----CCCCCCCHHHHHHH
Q 007112 384 TKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVVEAM 459 (617)
Q Consensus 384 ~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~M 459 (617)
.|+ +++.+|+..- ....... + ....+|.|+++. .|+++=.- ..-++|+++.+..|
T Consensus 161 ~G~-------~V~~~dr~~~-------~~~~~~~-~----~~~~~l~ell~~--aDiV~l~~Plt~~t~~li~~~~l~~m 219 (315)
T 3pp8_A 161 WGF-------PLRCWSRSRK-------SWPGVES-Y----VGREELRAFLNQ--TRVLINLLPNTAQTVGIINSELLDQL 219 (315)
T ss_dssp TTC-------CEEEEESSCC-------CCTTCEE-E----ESHHHHHHHHHT--CSEEEECCCCCGGGTTCBSHHHHTTS
T ss_pred CCC-------EEEEEcCCch-------hhhhhhh-h----cccCCHHHHHhh--CCEEEEecCCchhhhhhccHHHHhhC
Confidence 264 5778887521 1111110 1 011478888886 88887431 22468889988888
Q ss_pred HcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCccee-CCeeeccCCCCcccccchhhHHHHHhCCcccC
Q 007112 460 ASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEY-NGKVFVPGQGNNAYIFPGLGLGLIISGAIRVR 538 (617)
Q Consensus 460 a~~~erPIIFaLSNPt~~aEct~edA~~wT~GraifASGSPF~pv~~-~Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~It 538 (617)
. +..++.=.|.-..--|---.+|++ +|+.-.|.=-=|++--. .+.. -=+..|+.+-|=++- .+. .
T Consensus 220 k---~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~~~~p--L~~~~nvilTPHia~------~t~-~ 285 (315)
T 3pp8_A 220 P---DGAYVLNLARGVHVQEADLLAALD--SGKLKGAMLDVFSQEPLPQESP--LWRHPRVAMTPHIAA------VTR-P 285 (315)
T ss_dssp C---TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSSCCTTCG--GGGCTTEEECSSCSS------CCC-H
T ss_pred C---CCCEEEECCCChhhhHHHHHHHHH--hCCccEEEcCCCCCCCCCCCCh--hhcCCCEEECCCCCc------ccH-H
Confidence 5 667887777644223333334443 46543332111111000 0000 114467888887652 222 2
Q ss_pred HHHHHHHHHHHHhccCc
Q 007112 539 DEMLLAASEALAAQVTQ 555 (617)
Q Consensus 539 d~M~laAA~aLA~~v~~ 555 (617)
+.|...+++-|.....-
T Consensus 286 ~~~~~~~~~ni~~~~~G 302 (315)
T 3pp8_A 286 AEAIDYISRTITQLEKG 302 (315)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 56777777777776543
No 177
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=79.12 E-value=1.6 Score=45.29 Aligned_cols=37 Identities=24% Similarity=0.369 Sum_probs=32.8
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.|+..+|+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 33 ~L~~~~VlivG~GGlG~~ia~~La~~-----Gv------g~itlvD~d 69 (346)
T 1y8q_A 33 RLRASRVLLVGLKGLGAEIAKNLILA-----GV------KGLTMLDHE 69 (346)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEECC
Confidence 56688999999999999999999876 76 789999976
No 178
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=79.03 E-value=2.7 Score=41.21 Aligned_cols=96 Identities=15% Similarity=0.115 Sum_probs=56.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhcc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI 436 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 436 (617)
-.||.|+|+|..|..+|..+... |. ..+++++|++. . .+...++.-..+ ....++.|+++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~-----g~-----~~~V~~~d~~~----~---~~~~~~~~g~~~-~~~~~~~~~~~~- 66 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD-----HP-----HYKIVGYNRSD----R---SRDIALERGIVD-EATADFKVFAAL- 66 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSH----H---HHHHHHHTTSCS-EEESCTTTTGGG-
T ss_pred cceEEEEeeCHHHHHHHHHHHhC-----CC-----CcEEEEEcCCH----H---HHHHHHHcCCcc-cccCCHHHhhcC-
Confidence 35899999999999999988653 32 14688888641 1 111111100000 012355566664
Q ss_pred CCcEEEeecCCCCCCCHHHHHHHHcC--CCCcEEEecCCC
Q 007112 437 KPTMLMGTSGVGKTFTKEVVEAMASF--NEKPVIFALSNP 474 (617)
Q Consensus 437 kPtvLIG~S~~~g~Fteevv~~Ma~~--~erPIIFaLSNP 474 (617)
+|++| ++..+.. .+++++.+..+ .+..||.-+||-
T Consensus 67 -aDvVi-lavp~~~-~~~v~~~l~~~~l~~~~ivi~~~~~ 103 (290)
T 3b1f_A 67 -ADVII-LAVPIKK-TIDFIKILADLDLKEDVIITDAGST 103 (290)
T ss_dssp -CSEEE-ECSCHHH-HHHHHHHHHTSCCCTTCEEECCCSC
T ss_pred -CCEEE-EcCCHHH-HHHHHHHHHhcCCCCCCEEEECCCC
Confidence 78777 4444433 38888888764 456677767763
No 179
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=78.96 E-value=1.9 Score=43.60 Aligned_cols=34 Identities=18% Similarity=0.277 Sum_probs=27.3
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
...||.|+|+|..|.++|..+... |. +++++|+.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 456999999999999999998753 53 57777764
No 180
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=78.84 E-value=9.3 Score=39.88 Aligned_cols=189 Identities=16% Similarity=0.120 Sum_probs=112.8
Q ss_pred CCceeec-C-ccchhHHHHHHHHHHHHH----------------------------hCCCCCCceEEEeCcChHHHHHHH
Q 007112 325 SHLVFND-D-IQGTASVVLAGILSALKL----------------------------VGGTLADQTFLFLGAGEAGTGIAE 374 (617)
Q Consensus 325 ~~~~FND-D-iQGTaaV~LAgll~Alr~----------------------------~g~~l~d~riv~~GAGsAg~GIA~ 374 (617)
.+++.|. + -..+|=-+++-+|+..|- .|..|.+.++.|+|.|..|..+|+
T Consensus 98 gI~V~n~pg~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA~ 177 (352)
T 3gg9_A 98 GVVVLEGKGSPVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGYGKIGQLVAG 177 (352)
T ss_dssp TCEEECCCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCTTCEEEEECCSHHHHHHHH
T ss_pred CeEEEECCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCCCCEEEEEeECHHHHHHHH
Confidence 5556652 1 124455677777877663 256789999999999999999999
Q ss_pred HHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec----CCCCC
Q 007112 375 LIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKT 450 (617)
Q Consensus 375 li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~ 450 (617)
.+... |+ +++.+|+.. .. + .... .......+|.|+++. .|+++=.- ..-++
T Consensus 178 ~l~~~-----G~-------~V~~~d~~~----~~-~---~~~~---~g~~~~~~l~ell~~--aDiV~l~~Plt~~t~~l 232 (352)
T 3gg9_A 178 YGRAF-----GM-------NVLVWGREN----SK-E---RARA---DGFAVAESKDALFEQ--SDVLSVHLRLNDETRSI 232 (352)
T ss_dssp HHHHT-----TC-------EEEEECSHH----HH-H---HHHH---TTCEECSSHHHHHHH--CSEEEECCCCSTTTTTC
T ss_pred HHHhC-----CC-------EEEEECCCC----CH-H---HHHh---cCceEeCCHHHHHhh--CCEEEEeccCcHHHHHh
Confidence 88542 64 688888641 00 0 0000 011123589999987 89887532 23468
Q ss_pred CCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEe-----eCCCCCcceeCCeeeccCCCCcccccchh
Q 007112 451 FTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFA-----SGSPFDPVEYNGKVFVPGQGNNAYIFPGL 525 (617)
Q Consensus 451 Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wT~GraifA-----SGSPF~pv~~~Gk~~~p~Q~NN~yiFPGi 525 (617)
|+++.++.|. +..++.=.|+-..--|---.+|++ +|+.-.| ..-|.++ .. .-=+..|+.+-|=+
T Consensus 233 i~~~~l~~mk---~gailIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~~----~~--pL~~~~nvilTPHi 301 (352)
T 3gg9_A 233 ITVADLTRMK---PTALFVNTSRAELVEENGMVTALN--RGRPGMAAIDVFETEPILQ----GH--TLLRMENCICTPHI 301 (352)
T ss_dssp BCHHHHTTSC---TTCEEEECSCGGGBCTTHHHHHHH--HTSSSEEEECCCSSSCCCS----CC--GGGGCTTEEECCSC
T ss_pred hCHHHHhhCC---CCcEEEECCCchhhcHHHHHHHHH--hCCccEEEecccCCCCCCC----CC--hhhcCCCEEECCCC
Confidence 9999998885 677888888744334544555554 4553211 1112210 00 01134688888877
Q ss_pred hHHHHHhCCcccCHHHHHHHHHHHHhccC
Q 007112 526 GLGLIISGAIRVRDEMLLAASEALAAQVT 554 (617)
Q Consensus 526 glG~l~s~a~~Itd~M~laAA~aLA~~v~ 554 (617)
|-.. ..-.+.|...+++-|.....
T Consensus 302 a~~t-----~e~~~~~~~~~~~ni~~~~~ 325 (352)
T 3gg9_A 302 GYVE-----RESYEMYFGIAFQNILDILQ 325 (352)
T ss_dssp TTCB-----HHHHHHHHHHHHHHHHHHHT
T ss_pred CCCC-----HHHHHHHHHHHHHHHHHHHc
Confidence 4211 11224566677777776654
No 181
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=78.69 E-value=2.5 Score=43.46 Aligned_cols=110 Identities=7% Similarity=0.137 Sum_probs=60.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCC-cccCCchhch--hhhc------ccCCCCC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSS-RKESLQHFKK--PWAH------EHAPIKS 428 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~-R~~~L~~~k~--~fA~------~~~~~~~ 428 (617)
.||.|+|+|..|..+|..+..+-... . .-..+++++|+..-+... +.+.+..... .|-. ......+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~----~-~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~ 96 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNN----Y-LFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSD 96 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHC----T-TBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCcc----C-CCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECC
Confidence 48999999999999999997652110 0 000468888875321000 0011111000 0000 0011246
Q ss_pred HHHHHhccCCcEEEeecCCCCCCCHHHHHHHHc----C-CCCcEEEecCCCCC
Q 007112 429 LLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMAS----F-NEKPVIFALSNPTS 476 (617)
Q Consensus 429 L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~----~-~erPIIFaLSNPt~ 476 (617)
+.|+++. .|++| ++... -..+++++.++. . .+..+|..++|-.+
T Consensus 97 ~~ea~~~--aDvVi-lav~~-~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 97 LASVIND--ADLLI-FIVPC-QYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp THHHHTT--CSEEE-ECCCH-HHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred HHHHHcC--CCEEE-EcCCH-HHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 7788875 78766 33322 467888888875 3 34568888998654
No 182
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=78.67 E-value=3.1 Score=41.39 Aligned_cols=32 Identities=22% Similarity=0.332 Sum_probs=25.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.||.|+|+|..|..+|..+.. .|. +++++|++
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~-----~g~-------~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLK-----MGH-------TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 689999999999999998864 253 57888864
No 183
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=78.56 E-value=1.6 Score=44.41 Aligned_cols=35 Identities=20% Similarity=0.443 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
..||||+|+|.||+..|..|.+. |- .-+|.++|++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~-----~~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DP-----SIEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----Cc-----CCeEEEEeCC
Confidence 56999999999999999988653 31 1368888875
No 184
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=78.48 E-value=12 Score=38.13 Aligned_cols=121 Identities=17% Similarity=0.190 Sum_probs=77.2
Q ss_pred CCceeecCc---cchhHHHHHHHHHHHHH---------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHH
Q 007112 325 SHLVFNDDI---QGTASVVLAGILSALKL---------------------VGGTLADQTFLFLGAGEAGTGIAELIALEM 380 (617)
Q Consensus 325 ~~~~FNDDi---QGTaaV~LAgll~Alr~---------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~ 380 (617)
.+.+.|--- +.+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|-.+|+.+..
T Consensus 90 gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~-- 167 (320)
T 1gdh_A 90 GIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQG-- 167 (320)
T ss_dssp TCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHT--
T ss_pred CcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHH--
Confidence 455555432 23444578888887663 2456889999999999999999998853
Q ss_pred HhccCCCHHhhcCeEEEEcc-CCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecC----CCCCCCHHH
Q 007112 381 SKQTKAPIEEARKKIWLVDS-KGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEV 455 (617)
Q Consensus 381 ~~~~G~s~eeAr~~i~lvD~-~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteev 455 (617)
.| -+++.+|+ .. .. . ..+ .+ ......+|.|+++. .|+++=.-- ..++++++.
T Consensus 168 ---~G-------~~V~~~d~~~~----~~-~---~~~-~~--g~~~~~~l~ell~~--aDvVil~~p~~~~t~~~i~~~~ 224 (320)
T 1gdh_A 168 ---FD-------MDIDYFDTHRA----SS-S---DEA-SY--QATFHDSLDSLLSV--SQFFSLNAPSTPETRYFFNKAT 224 (320)
T ss_dssp ---TT-------CEEEEECSSCC----CH-H---HHH-HH--TCEECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHHH
T ss_pred ---CC-------CEEEEECCCCc----Ch-h---hhh-hc--CcEEcCCHHHHHhh--CCEEEEeccCchHHHhhcCHHH
Confidence 25 36888887 41 10 0 000 01 00112478898886 888874422 235788888
Q ss_pred HHHHHcCCCCcEEEecCC
Q 007112 456 VEAMASFNEKPVIFALSN 473 (617)
Q Consensus 456 v~~Ma~~~erPIIFaLSN 473 (617)
++.|. +.-+|.-.|.
T Consensus 225 l~~mk---~gailIn~ar 239 (320)
T 1gdh_A 225 IKSLP---QGAIVVNTAR 239 (320)
T ss_dssp HTTSC---TTEEEEECSC
T ss_pred HhhCC---CCcEEEECCC
Confidence 88774 5667777776
No 185
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=78.28 E-value=2.5 Score=41.77 Aligned_cols=32 Identities=19% Similarity=0.276 Sum_probs=26.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.||.|+|+|..|.++|..+... |. +++++|++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 5899999999999999998753 53 68888874
No 186
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=78.02 E-value=4.9 Score=43.85 Aligned_cols=98 Identities=13% Similarity=0.173 Sum_probs=62.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhccc--CCCCCHHHHHhc
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH--APIKSLLDAVKA 435 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~--~~~~~L~eaV~~ 435 (617)
.+|.|+|+|..|..+|..+... |. +++++|+. .+ ......+.-+... ....++.|+++.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~-----G~-------~V~v~dr~----~~---~~~~l~~~g~~g~~i~~~~s~~e~v~~ 65 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRT----VS---KVDDFLANEAKGTKVVGAQSLKEMVSK 65 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----TH---HHHHHHHTTTTTSSCEECSSHHHHHHT
T ss_pred CEEEEEChhHHHHHHHHHHHHC-----CC-------EEEEEeCC----HH---HHHHHHhcccCCCceeccCCHHHHHhh
Confidence 5899999999999999988753 63 57888874 11 1222111111110 113688998875
Q ss_pred c-CCcEEEeecCCCCCCCHHHHHHHHcC-CCCcEEEecCCCC
Q 007112 436 I-KPTMLMGTSGVGKTFTKEVVEAMASF-NEKPVIFALSNPT 475 (617)
Q Consensus 436 v-kPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNPt 475 (617)
+ +||++| ++-..+.-++++++.+..+ .+..||.-.||-.
T Consensus 66 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 66 LKKPRRII-LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp BCSSCEEE-ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 4 488776 4444444577888877654 4667888888844
No 187
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=77.82 E-value=2.1 Score=42.96 Aligned_cols=36 Identities=14% Similarity=0.233 Sum_probs=28.2
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.+...||.|+|+|..|.++|..+... |. +++++|++
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 41 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNRS 41 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 34567999999999999999998753 53 57777764
No 188
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=77.78 E-value=1.3 Score=40.43 Aligned_cols=37 Identities=22% Similarity=0.290 Sum_probs=28.5
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
++.+.+|+|+|+|..|..+|+.+... .| .+++++|++
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~----~g-------~~V~vid~~ 72 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRAR----YG-------KISLGIEIR 72 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHH----HC-------SCEEEEESC
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhc----cC-------CeEEEEECC
Confidence 35677999999999999999988542 04 358888874
No 189
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=77.62 E-value=1.5 Score=45.72 Aligned_cols=120 Identities=18% Similarity=0.184 Sum_probs=66.0
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhh---cccCCCCCHHHH
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA---HEHAPIKSLLDA 432 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA---~~~~~~~~L~ea 432 (617)
++.||+|+|||.+|-.+|+.|++. .++.++|++ .++ +......+. -+..+..+|.++
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-------------~~V~V~~R~----~~~---a~~la~~~~~~~~d~~~~~~l~~l 74 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-------------FDVYIGDVN----NEN---LEKVKEFATPLKVDASNFDKLVEV 74 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-------------SEEEEEESC----HHH---HHHHTTTSEEEECCTTCHHHHHHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-------------CeEEEEECC----HHH---HHHHHhhCCeEEEecCCHHHHHHH
Confidence 357999999999999998887531 357888874 222 222111121 011223468888
Q ss_pred HhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCcc
Q 007112 433 VKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPV 504 (617)
Q Consensus 433 V~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wT~GraifASGSPF~pv 504 (617)
++. +|++|=+. +..+..+++++-.+.. . .++-+|.-...++.-.++|.+ .|. .+..|+-|+|-
T Consensus 75 l~~--~DvVIn~~--P~~~~~~v~~a~l~~G-~-~~vD~s~~~~~~~~l~~~Ak~--aG~-~~l~g~G~dPG 137 (365)
T 2z2v_A 75 MKE--FELVIGAL--PGFLGFKSIKAAIKSK-V-DMVDVSFMPENPLELRDEAEK--AQV-TIVFDAGFAPG 137 (365)
T ss_dssp HTT--CSCEEECC--CHHHHHHHHHHHHHTT-C-CEEECCCCSSCGGGGHHHHHH--TTC-EEECSCBTTTB
T ss_pred HhC--CCEEEECC--ChhhhHHHHHHHHHhC-C-eEEEccCCcHHHHHHHHHHHH--cCC-EEEECCCCcch
Confidence 885 89999763 2235667776644322 2 356677622112122344433 353 33455556664
No 190
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=77.61 E-value=4.7 Score=40.74 Aligned_cols=99 Identities=10% Similarity=0.128 Sum_probs=60.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhccc-CCCCCHHHHHhc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH-APIKSLLDAVKA 435 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~-~~~~~L~eaV~~ 435 (617)
..||.|+|+|..|..+|..|... |.. ...+++++|+. .++ +.+.. +.... .-..+..|+++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~-----G~~---~~~~V~v~~r~----~~~-~~~~~----l~~~G~~~~~~~~e~~~~ 84 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAA-----GVL---AAHKIMASSPD----MDL-ATVSA----LRKMGVKLTPHNKETVQH 84 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----TTS-HHHHH----HHHHTCEEESCHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-----CCC---CcceEEEECCC----ccH-HHHHH----HHHcCCEEeCChHHHhcc
Confidence 45899999999999999988653 531 11468888864 110 01111 11111 112467788876
Q ss_pred cCCcEEEeecCCCCCCCHHHHHHHHcC-CCCcEEEecCCCCC
Q 007112 436 IKPTMLMGTSGVGKTFTKEVVEAMASF-NEKPVIFALSNPTS 476 (617)
Q Consensus 436 vkPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNPt~ 476 (617)
.|++| ++..+ -..+++++.+... .+..+|.-+||..+
T Consensus 85 --aDvVi-lav~~-~~~~~vl~~l~~~l~~~~ivvs~s~gi~ 122 (322)
T 2izz_A 85 --SDVLF-LAVKP-HIIPFILDEIGADIEDRHIVVSCAAGVT 122 (322)
T ss_dssp --CSEEE-ECSCG-GGHHHHHHHHGGGCCTTCEEEECCTTCC
T ss_pred --CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 77766 33333 4677888877653 34568888888774
No 191
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=77.60 E-value=10 Score=39.30 Aligned_cols=119 Identities=14% Similarity=0.082 Sum_probs=78.8
Q ss_pred CCceeecCc---cchhHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHhc
Q 007112 325 SHLVFNDDI---QGTASVVLAGILSALKL------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSKQ 383 (617)
Q Consensus 325 ~~~~FNDDi---QGTaaV~LAgll~Alr~------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~ 383 (617)
.+++.|--- +.+|=-+++.+|+..|- .|..|.+.+|.|+|.|..|..+|+.+..
T Consensus 112 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~----- 186 (335)
T 2g76_A 112 GILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQS----- 186 (335)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHT-----
T ss_pred CeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHH-----
Confidence 566666432 23445578888887664 3567999999999999999999998753
Q ss_pred cCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcc-cCCCCCHHHHHhccCCcEEEeecC----CCCCCCHHHHHH
Q 007112 384 TKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-HAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVEA 458 (617)
Q Consensus 384 ~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv~~ 458 (617)
.|+ +++.+|+.. .. . .+.. .-...+|.|+++. .|+++=.-. ..++|+++.++.
T Consensus 187 ~G~-------~V~~~d~~~----~~-----~----~~~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 244 (335)
T 2g76_A 187 FGM-------KTIGYDPII----SP-----E----VSASFGVQQLPLEEIWPL--CDFITVHTPLLPSTTGLLNDNTFAQ 244 (335)
T ss_dssp TTC-------EEEEECSSS----CH-----H----HHHHTTCEECCHHHHGGG--CSEEEECCCCCTTTTTSBCHHHHTT
T ss_pred CCC-------EEEEECCCc----ch-----h----hhhhcCceeCCHHHHHhc--CCEEEEecCCCHHHHHhhCHHHHhh
Confidence 253 588888641 10 0 1111 1112479999886 898885421 235788888888
Q ss_pred HHcCCCCcEEEecCC
Q 007112 459 MASFNEKPVIFALSN 473 (617)
Q Consensus 459 Ma~~~erPIIFaLSN 473 (617)
|. +..++.=.|.
T Consensus 245 mk---~gailIN~ar 256 (335)
T 2g76_A 245 CK---KGVRVVNCAR 256 (335)
T ss_dssp SC---TTEEEEECSC
T ss_pred CC---CCcEEEECCC
Confidence 85 5678887776
No 192
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=77.56 E-value=2.4 Score=36.08 Aligned_cols=33 Identities=21% Similarity=0.352 Sum_probs=25.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+.+|+|+|+|..|..+|+.+.. .| .+++++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~-----~g-------~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE-----KG-------HDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 3589999999999999888754 24 368888874
No 193
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=77.51 E-value=1.8 Score=46.75 Aligned_cols=100 Identities=13% Similarity=0.132 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHhcCCCeeeeeecCCCCcHHHHHHHHc-CCCcee--ecCccchhHHHHHHHHHHHHHhC--------CCC
Q 007112 287 LLQEFMTAVKQNYGEKVLIQFEDFANHNAFELLSKYS-SSHLVF--NDDIQGTASVVLAGILSALKLVG--------GTL 355 (617)
Q Consensus 287 fidefv~av~~~fGp~~lIqfEDf~~~~Af~lL~ryr-~~~~~F--NDDiQGTaaV~LAgll~Alr~~g--------~~l 355 (617)
.+..+++.+...+ |+ |.|+-+....-.++-++|. ..+|++ |+..-+.+.....-|+..+.... ..-
T Consensus 134 ~~~~~l~~~a~~~-~~--v~~~~vd~~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~ 210 (521)
T 1hyu_A 134 DVVQALNLMAVLN-PR--IKHTAIDGGTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKR 210 (521)
T ss_dssp HHHHHHHHHHHHC-TT--EEEEEEETTTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHTS
T ss_pred HHHHHHHHHHhHc-Cc--eEEEEEechhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhccccccccccccc
Confidence 3556666666677 54 4555444445567888996 466644 66666667666666766654321 112
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
...+|||+|||.||+..|..+.+ .|+ ++.++|.+
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~-----~G~-------~v~lie~~ 244 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSAR-----KGI-------RTGLMGER 244 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CcccEEEECCcHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 34689999999999999988764 253 56777753
No 194
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=77.51 E-value=3.4 Score=38.77 Aligned_cols=100 Identities=11% Similarity=0.051 Sum_probs=56.2
Q ss_pred CCCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhch-hhhc-ccCCCCCH
Q 007112 353 GTLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKK-PWAH-EHAPIKSL 429 (617)
Q Consensus 353 ~~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~-~fA~-~~~~~~~L 429 (617)
.+|++.+|+|.|| |-.|..+++.+++ .| -++++++++. ++.+.+..... .+.. |.. .++
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~R~~----~~~~~~~~~~~~~~~~~Dl~--~~~ 78 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKN-----KG-------HEPVAMVRNE----EQGPELRERGASDIVVANLE--EDF 78 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSG----GGHHHHHHTTCSEEEECCTT--SCC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHh-----CC-------CeEEEEECCh----HHHHHHHhCCCceEEEcccH--HHH
Confidence 4578899999998 7788888777764 25 3688888751 11111111111 1111 111 556
Q ss_pred HHHHhccCCcEEEeecCCCCC------------CCHHHHHHHHcCCCCcEEEecC
Q 007112 430 LDAVKAIKPTMLMGTSGVGKT------------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 430 ~eaV~~vkPtvLIG~S~~~g~------------Fteevv~~Ma~~~erPIIFaLS 472 (617)
.++++ ++|++|=+.+.... -+..+++++.+..-+-|||.=|
T Consensus 79 ~~~~~--~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 79 SHAFA--SIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp GGGGT--TCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHc--CCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence 67776 49999977775421 1345677776555556666544
No 195
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=77.49 E-value=3.3 Score=39.78 Aligned_cols=76 Identities=17% Similarity=0.271 Sum_probs=45.6
Q ss_pred CCCCceEEEeCc-Ch-HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc----------
Q 007112 354 TLADQTFLFLGA-GE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH---------- 421 (617)
Q Consensus 354 ~l~d~riv~~GA-Gs-Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~---------- 421 (617)
.++++++||.|| |+ .|..+|+.+++ .| -+++++|++- +.+...+..+..
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~-----~G-------~~V~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~ 79 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALL-----EG-------ADVVISDYHE-------RRLGETRDQLADLGLGRVEAVV 79 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHH-----TT-------CEEEEEESCH-------HHHHHHHHHHHTTCSSCEEEEE
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHH-----CC-------CEEEEecCCH-------HHHHHHHHHHHhcCCCceEEEE
Confidence 478899999999 74 77777777764 36 3588888751 112222222211
Q ss_pred -ccCCCCCHHHHHhcc-----CCcEEEeecCCC
Q 007112 422 -EHAPIKSLLDAVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 422 -~~~~~~~L~eaV~~v-----kPtvLIG~S~~~ 448 (617)
|-.+..++.++++.+ ++|+||=..+..
T Consensus 80 ~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~ 112 (266)
T 3o38_A 80 CDVTSTEAVDALITQTVEKAGRLDVLVNNAGLG 112 (266)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred eCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcC
Confidence 111123455666655 799999877754
No 196
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=77.48 E-value=5.5 Score=42.65 Aligned_cols=71 Identities=24% Similarity=0.357 Sum_probs=47.8
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhc
Q 007112 357 DQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKA 435 (617)
Q Consensus 357 d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~ 435 (617)
--|++|+|+ |-+|.|-++.+... |.. ..++..+|.+ .+ .+.. +| +.++.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~l-----Ga~----~~~V~v~D~~--~~-~~g~-------~~-----------~~i~~ 263 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKV-----GIP----DANILKWDIK--ET-SRGG-------PF-----------DEIPQ 263 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHT-----TCC----GGGEEEECHH--HH-TTCS-------CC-----------THHHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhC-----CCC----cCceEEeecc--cc-ccCC-------ch-----------hhHhh
Confidence 468999999 99999999888642 641 1246666664 10 1100 01 23443
Q ss_pred cCCcEEEeecCC----CCCCCHHHHHHH
Q 007112 436 IKPTMLMGTSGV----GKTFTKEVVEAM 459 (617)
Q Consensus 436 vkPtvLIG~S~~----~g~Fteevv~~M 459 (617)
.|++||+--. |.++|+|+|+.|
T Consensus 264 --aDivIn~vlig~~aP~Lvt~e~v~~m 289 (394)
T 2qrj_A 264 --ADIFINCIYLSKPIAPFTNMEKLNNP 289 (394)
T ss_dssp --SSEEEECCCCCSSCCCSCCHHHHCCT
T ss_pred --CCEEEECcCcCCCCCcccCHHHHhcC
Confidence 8999998765 678999999988
No 197
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=77.45 E-value=1.3 Score=44.35 Aligned_cols=101 Identities=14% Similarity=0.102 Sum_probs=59.9
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCc---hh---chhhhc-ccCC
Q 007112 354 TLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ---HF---KKPWAH-EHAP 425 (617)
Q Consensus 354 ~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~---~~---k~~fA~-~~~~ 425 (617)
+++..+|+|.|| |-.|-.|++.|++ .| .+++.++++.- ...+.+. .. ...+.. +..+
T Consensus 7 ~M~~~~IlVtGatG~iG~~l~~~L~~-----~g-------~~V~~l~R~~~---~~~~~~~~~~~l~~~~v~~~~~Dl~d 71 (346)
T 3i6i_A 7 PSPKGRVLIAGATGFIGQFVATASLD-----AH-------RPTYILARPGP---RSPSKAKIFKALEDKGAIIVYGLINE 71 (346)
T ss_dssp ----CCEEEECTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSC---CCHHHHHHHHHHHHTTCEEEECCTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CCEEEEECCCC---CChhHHHHHHHHHhCCcEEEEeecCC
Confidence 455679999999 8888888887764 25 35888887530 0000011 00 001111 1122
Q ss_pred CCCHHHHHhccCCcEEEeecCCCCC-CCHHHHHHHHcCC-CCcEEE
Q 007112 426 IKSLLDAVKAIKPTMLMGTSGVGKT-FTKEVVEAMASFN-EKPVIF 469 (617)
Q Consensus 426 ~~~L~eaV~~vkPtvLIG~S~~~g~-Fteevv~~Ma~~~-erPIIF 469 (617)
..+|.++++..++|++|=+.+..++ -+..+++++.+.. -+-+|+
T Consensus 72 ~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 72 QEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred HHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 3468889986779999988776433 3788999988766 455554
No 198
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=77.37 E-value=2.9 Score=41.17 Aligned_cols=32 Identities=22% Similarity=0.360 Sum_probs=26.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.||.|+|+|..|..+|..+... | .+++++|++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----G-------CSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 4899999999999999988653 5 367778874
No 199
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=77.30 E-value=20 Score=36.73 Aligned_cols=122 Identities=19% Similarity=0.156 Sum_probs=81.9
Q ss_pred CCCceeecCcc---chhHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHh
Q 007112 324 SSHLVFNDDIQ---GTASVVLAGILSALKL------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSK 382 (617)
Q Consensus 324 ~~~~~FNDDiQ---GTaaV~LAgll~Alr~------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~ 382 (617)
..+.+.|---- .+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+..
T Consensus 92 ~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~---- 167 (333)
T 1j4a_A 92 LGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEG---- 167 (333)
T ss_dssp TTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHH----
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHH----
Confidence 46777775332 3444578888888762 2356889999999999999999998864
Q ss_pred ccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeecC----CCCCCCHHHHHH
Q 007112 383 QTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSG----VGKTFTKEVVEA 458 (617)
Q Consensus 383 ~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~----~~g~Fteevv~~ 458 (617)
.|+ +++.+|+.. .. . + ..++. ...+|.|+++. .|+++=.-. ..++++++.++.
T Consensus 168 -~G~-------~V~~~d~~~----~~-~-~----~~~~~---~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~ 224 (333)
T 1j4a_A 168 -FGA-------KVITYDIFR----NP-E-L----EKKGY---YVDSLDDLYKQ--ADVISLHVPDVPANVHMINDESIAK 224 (333)
T ss_dssp -TTC-------EEEEECSSC----CH-H-H----HHTTC---BCSCHHHHHHH--CSEEEECSCCCGGGTTCBSHHHHHH
T ss_pred -CCC-------EEEEECCCc----ch-h-H----HhhCe---ecCCHHHHHhh--CCEEEEcCCCcHHHHHHHhHHHHhh
Confidence 264 588888742 11 1 1 11221 12379999986 898885422 236788899998
Q ss_pred HHcCCCCcEEEecCCCC
Q 007112 459 MASFNEKPVIFALSNPT 475 (617)
Q Consensus 459 Ma~~~erPIIFaLSNPt 475 (617)
|. +..++.-.|.-.
T Consensus 225 mk---~ga~lIn~arg~ 238 (333)
T 1j4a_A 225 MK---QDVVIVNVSRGP 238 (333)
T ss_dssp SC---TTEEEEECSCGG
T ss_pred CC---CCcEEEECCCCc
Confidence 85 567888777743
No 200
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=77.18 E-value=2.1 Score=39.77 Aligned_cols=94 Identities=16% Similarity=0.115 Sum_probs=55.1
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchh-----chhhhc-ccCCCCCHH
Q 007112 358 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHF-----KKPWAH-EHAPIKSLL 430 (617)
Q Consensus 358 ~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~-----k~~fA~-~~~~~~~L~ 430 (617)
++|+|.|| |-.|..+++.|++. .| -++++++++. + ..++.. +..+.. +..+..++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~----~g-------~~V~~~~r~~----~--~~~~~~~~~~~~~~~~~~D~~d~~~~~ 68 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTY----TD-------MHITLYGRQL----K--TRIPPEIIDHERVTVIEGSFQNPGXLE 68 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHH----CC-------CEEEEEESSH----H--HHSCHHHHTSTTEEEEECCTTCHHHHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhc----CC-------ceEEEEecCc----c--ccchhhccCCCceEEEECCCCCHHHHH
Confidence 45999996 77777777777621 35 3688887751 1 012211 001111 212224677
Q ss_pred HHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEe
Q 007112 431 DAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFA 470 (617)
Q Consensus 431 eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFa 470 (617)
++++. .|++|=+.+..+.-++.+++.|.+..-+-|||.
T Consensus 69 ~~~~~--~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~i 106 (221)
T 3r6d_A 69 QAVTN--AEVVFVGAMESGSDMASIVKALSRXNIRRVIGV 106 (221)
T ss_dssp HHHTT--CSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHcC--CCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEE
Confidence 78875 899997776543337788888876555556664
No 201
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=76.82 E-value=4.9 Score=43.33 Aligned_cols=98 Identities=12% Similarity=0.124 Sum_probs=59.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhch-hhh-cccCCCCCHHHHHhc
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKK-PWA-HEHAPIKSLLDAVKA 435 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~-~fA-~~~~~~~~L~eaV~~ 435 (617)
.||.|+|+|..|..+|..|... |. +++++|+.. ++ +...++ ... .......++.|+++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~----~~---~~~l~~~~~~g~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTV----SK---VDDFLANEAKGTKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSST----HH---HHHHHHTTTTTSSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHC-----CC-------eEEEEeCCH----HH---HHHHHhccccCCCeEEeCCHHHHHhh
Confidence 4799999999999999988652 53 578888641 11 111111 000 001123578888863
Q ss_pred c-CCcEEEeecCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007112 436 I-KPTMLMGTSGVGKTFTKEVVEAMASFN-EKPVIFALSNPT 475 (617)
Q Consensus 436 v-kPtvLIG~S~~~g~Fteevv~~Ma~~~-erPIIFaLSNPt 475 (617)
+ +||++| ++...+...+++++.+...- +.-||+-+||-.
T Consensus 64 l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~ 104 (482)
T 2pgd_A 64 LKKPRRII-LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSE 104 (482)
T ss_dssp BCSSCEEE-ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 2 488777 44444445778887776433 456788888854
No 202
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=76.78 E-value=7.7 Score=38.43 Aligned_cols=104 Identities=19% Similarity=0.236 Sum_probs=59.8
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchh-chhhhc-ccCCCCCHH
Q 007112 354 TLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHF-KKPWAH-EHAPIKSLL 430 (617)
Q Consensus 354 ~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~-k~~fA~-~~~~~~~L~ 430 (617)
.++..+|+|.|| |-.|..+++.|++ .| .+++.+|+.. ....+.+... +..+.. +..+..++.
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~l~~~~~~~~~~~Dl~d~~~~~ 82 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLE-----RG-------DKVVGIDNFA---TGRREHLKDHPNLTFVEGSIADHALVN 82 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCCCTTEEEEECCTTCHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhHhhcCCceEEEEeCCCHHHHH
Confidence 355678999995 7777777776654 25 4688888752 1111112210 111111 212223577
Q ss_pred HHHhccCCcEEEeecCCCCC-------------CCHHHHHHHHcCCCCcEEEecC
Q 007112 431 DAVKAIKPTMLMGTSGVGKT-------------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 431 eaV~~vkPtvLIG~S~~~g~-------------Fteevv~~Ma~~~erPIIFaLS 472 (617)
++++..++|++|=+.+.... -|..+++++.+..-+.|||.=|
T Consensus 83 ~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 137 (333)
T 2q1w_A 83 QLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQT 137 (333)
T ss_dssp HHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 88887789999988776532 1346777777666668888544
No 203
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=76.28 E-value=1.6 Score=42.15 Aligned_cols=97 Identities=13% Similarity=0.188 Sum_probs=56.6
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhc
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKA 435 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~ 435 (617)
+..||+|.|||-.|..+++.|++. | .+++.++++. +.+.+.-..+.-+..+..++.++++.
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~-----g-------~~V~~~~r~~-------~~~~~~~~~~~~Dl~d~~~~~~~~~~ 62 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQ-----G-------HEVTGLRRSA-------QPMPAGVQTLIADVTRPDTLASIVHL 62 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECTT-------SCCCTTCCEEECCTTCGGGCTTGGGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCCc-------cccccCCceEEccCCChHHHHHhhcC
Confidence 346899999998888888877642 5 3577777641 11211111111121222345555654
Q ss_pred cCCcEEEeecCCCC-----------CCCHHHHHHHHcCCCCcEEEecC
Q 007112 436 IKPTMLMGTSGVGK-----------TFTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 436 vkPtvLIG~S~~~g-----------~Fteevv~~Ma~~~erPIIFaLS 472 (617)
++|++|=+.+... ..|..+++++.+..-+-+||.=|
T Consensus 63 -~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 63 -RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp -CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred -CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 6999997654321 12677888887666567887544
No 204
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=76.19 E-value=5.4 Score=39.98 Aligned_cols=36 Identities=17% Similarity=0.133 Sum_probs=28.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+.+-.||.|+|+|..|.++|..+... |. +++++|++
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 53 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNRT 53 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred cccCCEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 34446999999999999999998753 53 68888874
No 205
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=76.15 E-value=3.8 Score=40.34 Aligned_cols=32 Identities=22% Similarity=0.283 Sum_probs=26.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.||.|+|+|..|..+|..+... | .+++++|++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----G-------FDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 3799999999999999998764 5 357788874
No 206
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=75.94 E-value=14 Score=37.24 Aligned_cols=33 Identities=27% Similarity=0.309 Sum_probs=27.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.||.|+|+|..|.++|..+... |. ++++++|++
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCC
Confidence 6899999999999999999764 53 478888874
No 207
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=75.90 E-value=2.8 Score=41.22 Aligned_cols=32 Identities=22% Similarity=0.311 Sum_probs=25.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.||.|+|+|..|..+|..+... |. +++++|++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE-----GV-------TVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 5899999999999999888642 53 57888764
No 208
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=75.71 E-value=3.9 Score=40.28 Aligned_cols=91 Identities=13% Similarity=0.207 Sum_probs=56.9
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhcc
Q 007112 358 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI 436 (617)
Q Consensus 358 ~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 436 (617)
.||.|+|+ |..|..+|..+.. .| -+++++|++ .++ +...+. + .-...++.++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~-----~g-------~~V~~~~r~----~~~---~~~~~~-~---g~~~~~~~~~~~~- 67 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD-----SA-------HHLAAIEIA----PEG---RDRLQG-M---GIPLTDGDGWIDE- 67 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----SS-------SEEEEECCS----HHH---HHHHHH-T---TCCCCCSSGGGGT-
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CC-------CEEEEEECC----HHH---HHHHHh-c---CCCcCCHHHHhcC-
Confidence 48999999 9999999998864 25 268888864 111 111111 1 1111355667764
Q ss_pred CCcEEEeecCCCCCCCHHHHHHHHcC-CCCcEEEecCCCC
Q 007112 437 KPTMLMGTSGVGKTFTKEVVEAMASF-NEKPVIFALSNPT 475 (617)
Q Consensus 437 kPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNPt 475 (617)
+|++| ++..+.. .+++++.+... .+..||.-+|+..
T Consensus 68 -aDvVi-~av~~~~-~~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 68 -ADVVV-LALPDNI-IEKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp -CSEEE-ECSCHHH-HHHHHHHHGGGSCTTCEEEESCSHH
T ss_pred -CCEEE-EcCCchH-HHHHHHHHHHhCCCCCEEEECCCCc
Confidence 88887 3333333 68888888654 3456777788854
No 209
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=75.42 E-value=4.6 Score=39.43 Aligned_cols=30 Identities=20% Similarity=0.304 Sum_probs=24.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEc
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVD 399 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD 399 (617)
.||.|+|+|..|..+|..+... |. +++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARA-----GH-------QLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHT-----TC-------EEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhC-----CC-------EEEEEc
Confidence 3899999999999999988642 53 577777
No 210
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=75.25 E-value=16 Score=38.02 Aligned_cols=209 Identities=16% Similarity=0.113 Sum_probs=118.7
Q ss_pred eeeecCCCCcHHHHHHHHcCCCceeecCc---cchhHHHHHHHHHHHHHh------------------------C-CCCC
Q 007112 305 IQFEDFANHNAFELLSKYSSSHLVFNDDI---QGTASVVLAGILSALKLV------------------------G-GTLA 356 (617)
Q Consensus 305 IqfEDf~~~~Af~lL~ryr~~~~~FNDDi---QGTaaV~LAgll~Alr~~------------------------g-~~l~ 356 (617)
|+.--.+..|- ++-.--+..+.+.|--- +.+|=-+++.+|+..|-. | ..|.
T Consensus 89 I~~~~~G~d~i-d~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~ 167 (347)
T 1mx3_A 89 IVRIGSGFDNI-DIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIR 167 (347)
T ss_dssp EEESSSCCTTB-CHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCT
T ss_pred EEEcccccCcc-cHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCC
Confidence 55555555442 22111234566666432 344555788888887621 2 4688
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhcc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI 436 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 436 (617)
+.++.|+|.|..|..+|+.+.. .|+ +++.+|++- .. .. ...+ ......+|.|+++.
T Consensus 168 g~tvGIIG~G~IG~~vA~~l~~-----~G~-------~V~~~d~~~----~~--~~---~~~~--g~~~~~~l~ell~~- 223 (347)
T 1mx3_A 168 GETLGIIGLGRVGQAVALRAKA-----FGF-------NVLFYDPYL----SD--GV---ERAL--GLQRVSTLQDLLFH- 223 (347)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECTTS----CT--TH---HHHH--TCEECSSHHHHHHH-
T ss_pred CCEEEEEeECHHHHHHHHHHHH-----CCC-------EEEEECCCc----ch--hh---Hhhc--CCeecCCHHHHHhc-
Confidence 9999999999999999998853 364 588888641 11 01 0111 11123478898886
Q ss_pred CCcEEEeec----CCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEe-----eCCCCCcceeC
Q 007112 437 KPTMLMGTS----GVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFA-----SGSPFDPVEYN 507 (617)
Q Consensus 437 kPtvLIG~S----~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wT~GraifA-----SGSPF~pv~~~ 507 (617)
.|+++=.- ...++++++.++.|. +.-++.=.|+=..--|..-.+|++ +|+.-.| ..-|+++ .
T Consensus 224 -aDvV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~arg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EP~~~---~ 294 (347)
T 1mx3_A 224 -SDCVTLHCGLNEHNHHLINDFTVKQMR---QGAFLVNTARGGLVDEKALAQALK--EGRIRGAALDVHESEPFSF---S 294 (347)
T ss_dssp -CSEEEECCCCCTTCTTSBSHHHHTTSC---TTEEEEECSCTTSBCHHHHHHHHH--HTSEEEEEESCCSSSSCCT---T
T ss_pred -CCEEEEcCCCCHHHHHHhHHHHHhcCC---CCCEEEECCCChHHhHHHHHHHHH--hCCCcEEEEeecccCCCCC---C
Confidence 88887532 234678888888884 566888777744223333334443 4554322 2233221 1
Q ss_pred CeeeccCCCCcccccchhhHHHHHhCCcccCHHHHHHHHHHHHhccC
Q 007112 508 GKVFVPGQGNNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAAQVT 554 (617)
Q Consensus 508 Gk~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~laAA~aLA~~v~ 554 (617)
+.. -=..+|+.+-|=++-. .....+.|...+++-+.....
T Consensus 295 ~~~--L~~~~nvi~tPHia~~-----t~~~~~~~~~~~~~ni~~~~~ 334 (347)
T 1mx3_A 295 QGP--LKDAPNLICTPHAAWY-----SEQASIEMREEAAREIRRAIT 334 (347)
T ss_dssp SST--TTTCSSEEECSSCTTC-----CHHHHHHHHHHHHHHHHHHHH
T ss_pred Cch--HHhCCCEEEEchHHHH-----HHHHHHHHHHHHHHHHHHHHc
Confidence 111 1247899999987632 222334556666666665543
No 211
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=74.84 E-value=8.6 Score=39.64 Aligned_cols=195 Identities=15% Similarity=0.120 Sum_probs=109.9
Q ss_pred CCceeecCc---cchhHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHH
Q 007112 325 SHLVFNDDI---QGTASVVLAGILSALKL--------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMS 381 (617)
Q Consensus 325 ~~~~FNDDi---QGTaaV~LAgll~Alr~--------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~ 381 (617)
.+.+.|--- +.+|=-+++-+|+..|- .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 90 gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~--- 166 (330)
T 4e5n_A 90 GVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQG--- 166 (330)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTT---
T ss_pred CcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHH---
Confidence 455555321 23455677777877652 2456899999999999999999988743
Q ss_pred hccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec----CCCCCCCHHHHH
Q 007112 382 KQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVVE 457 (617)
Q Consensus 382 ~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~ 457 (617)
.|+ +++.+|+... . ....+ .+ .-...+|.|+++. .|+++=.- ...++++++.++
T Consensus 167 --~G~-------~V~~~d~~~~---~----~~~~~-~~---g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~ 224 (330)
T 4e5n_A 167 --WGA-------TLQYHEAKAL---D----TQTEQ-RL---GLRQVACSELFAS--SDFILLALPLNADTLHLVNAELLA 224 (330)
T ss_dssp --SCC-------EEEEECSSCC---C----HHHHH-HH---TEEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHT
T ss_pred --CCC-------EEEEECCCCC---c----HhHHH-hc---CceeCCHHHHHhh--CCEEEEcCCCCHHHHHHhCHHHHh
Confidence 364 5888887531 1 11111 11 0112379999987 88887542 234689999998
Q ss_pred HHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCcceeCCeeecc-------CCCCcccccchhhHHHH
Q 007112 458 AMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKVFVP-------GQGNNAYIFPGLGLGLI 530 (617)
Q Consensus 458 ~Ma~~~erPIIFaLSNPt~~aEct~edA~~wT~GraifASGSPF~pv~~~Gk~~~p-------~Q~NN~yiFPGiglG~l 530 (617)
.|. +..+|.=.|+-..--|---.+|+ .+|+.-.|-=-=|++-.+ .....| =+..|+.+-|=+|-..
T Consensus 225 ~mk---~gailIN~arg~~vd~~aL~~aL--~~g~i~gA~lDV~~~E~~-~~~~~Pl~~~~~L~~~~nvilTPHia~~t- 297 (330)
T 4e5n_A 225 LVR---PGALLVNPCRGSVVDEAAVLAAL--ERGQLGGYAADVFEMEDW-ARADRPQQIDPALLAHPNTLFTPHIGSAV- 297 (330)
T ss_dssp TSC---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEEEESCCGGGCT-TCTTCCSSCCHHHHTCSSEEECSSCTTCC-
T ss_pred hCC---CCcEEEECCCCchhCHHHHHHHH--HhCCccEEEecccccccc-cccCCCCCCCchHHcCCCEEECCcCCCCh-
Confidence 885 67788888774322232233444 346544332111111100 000012 1345777777765321
Q ss_pred HhCCcccCHHHHHHHHHHHHhccCc
Q 007112 531 ISGAIRVRDEMLLAASEALAAQVTQ 555 (617)
Q Consensus 531 ~s~a~~Itd~M~laAA~aLA~~v~~ 555 (617)
..-.+.|...+++-|.....-
T Consensus 298 ----~e~~~~~~~~~~~ni~~~~~g 318 (330)
T 4e5n_A 298 ----RAVRLEIERCAAQNILQALAG 318 (330)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHTT
T ss_pred ----HHHHHHHHHHHHHHHHHHHcC
Confidence 122355666666666666543
No 212
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=74.77 E-value=6.1 Score=39.10 Aligned_cols=103 Identities=16% Similarity=0.153 Sum_probs=60.9
Q ss_pred CCCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcc---cCCchhchhhhc-ccCCCC
Q 007112 353 GTLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRK---ESLQHFKKPWAH-EHAPIK 427 (617)
Q Consensus 353 ~~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~---~~L~~~k~~fA~-~~~~~~ 427 (617)
.++++.+|||.|| |-.|..+++.|++ .| -+++.+|+.. .... +.+. ...+.. +..+..
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~l~--~v~~~~~Dl~d~~ 78 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLP-----QG-------HEILVIDNFA---TGKREVLPPVA--GLSVIEGSVTDAG 78 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGG-----GT-------CEEEEEECCS---SSCGGGSCSCT--TEEEEECCTTCHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhhhccC--CceEEEeeCCCHH
Confidence 4577889999998 7777777666643 25 3688888741 1110 1110 111111 112223
Q ss_pred CHHHHHhccCCcEEEeecCCCCC-------------CCHHHHHHHHcCCCCcEEEecC
Q 007112 428 SLLDAVKAIKPTMLMGTSGVGKT-------------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 428 ~L~eaV~~vkPtvLIG~S~~~g~-------------Fteevv~~Ma~~~erPIIFaLS 472 (617)
++.++++.+++|++|=+.+.... -+..+++++.+..-+.|||.=|
T Consensus 79 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 136 (330)
T 2pzm_A 79 LLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQT 136 (330)
T ss_dssp HHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 57778876679999988876532 0345677776655567888644
No 213
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=74.61 E-value=1.5 Score=38.75 Aligned_cols=32 Identities=16% Similarity=0.366 Sum_probs=26.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~-----~g-------~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLA-----SD-------IPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CC-------CCEEEEECC
Confidence 579999999999999998864 25 368889885
No 214
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=74.20 E-value=4 Score=37.78 Aligned_cols=97 Identities=8% Similarity=0.110 Sum_probs=54.5
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhcc
Q 007112 358 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI 436 (617)
Q Consensus 358 ~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 436 (617)
.||+|.|| |-.|-.+++.|++ .| .++++++++. ++.+.+.+.-..+.-+..+..++.++++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 67 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALN-----RG-------FEVTAVVRHP----EKIKIENEHLKVKKADVSSLDEVCEVCKG- 67 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHT-----TT-------CEEEEECSCG----GGCCCCCTTEEEECCCTTCHHHHHHHHTT-
T ss_pred CEEEEEcCCchHHHHHHHHHHH-----CC-------CEEEEEEcCc----ccchhccCceEEEEecCCCHHHHHHHhcC-
Confidence 58999996 6666666666543 25 4788888862 11111211111111122223467788875
Q ss_pred CCcEEEeecCCCC----------CCCHHHHHHHHcCCCCcEEEecC
Q 007112 437 KPTMLMGTSGVGK----------TFTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 437 kPtvLIG~S~~~g----------~Fteevv~~Ma~~~erPIIFaLS 472 (617)
+|++|=+.+... ..+..+++++.+..-+.+||.=|
T Consensus 68 -~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 112 (227)
T 3dhn_A 68 -ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG 112 (227)
T ss_dssp -CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred -CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 899997765431 12456777777666556666433
No 215
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=73.79 E-value=3.3 Score=42.40 Aligned_cols=104 Identities=21% Similarity=0.290 Sum_probs=64.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCC--CCHHHHHhcc
Q 007112 359 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPI--KSLLDAVKAI 436 (617)
Q Consensus 359 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~--~~L~eaV~~v 436 (617)
||.++|||..|..+|-+|... |+ -..+.|+|.+-=..++-.-+|.+- .+|....... .+-.++++.
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~G~a~DL~h~-~~~~~~~~~i~~~~d~~~~~~- 69 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHA-AAGIDKYPKIVGGADYSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHH-HGGGTCCCEEEEESCGGGGTT-
T ss_pred EEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCCCcchhhhhhhhcc-cccCCCCCeEecCCCHHHhCC-
Confidence 799999999999998887642 54 256999997521111111123331 1222111111 122355665
Q ss_pred CCcEEEeecCCCCC--CC------------HHHHHHHHcCCCCcEEEecCCCC
Q 007112 437 KPTMLMGTSGVGKT--FT------------KEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 437 kPtvLIG~S~~~g~--Ft------------eevv~~Ma~~~erPIIFaLSNPt 475 (617)
.|+.|=+.|.+.- -| +++++.+++++...||+-.|||-
T Consensus 70 -aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPv 121 (294)
T 2x0j_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp -CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred -CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 8999866665522 12 46788888999999999999997
No 216
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=73.50 E-value=1.3 Score=46.05 Aligned_cols=118 Identities=16% Similarity=0.205 Sum_probs=70.2
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhccc--CCCCCHHH
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH--APIKSLLD 431 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~--~~~~~L~e 431 (617)
+....||.++|||..|.++|-.++.. |+ ...+.|+|.+-=..++-.-+|.+. .+|.... ....+..
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~~~d~~- 83 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMK-----DL-----ADELALVDVIEDKLKGEMMDLQHG-SLFLKTPKIVSSKDYS- 83 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGCSCCEEEECSSGG-
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEeCChHHHHHHHHhhhhh-hhccCCCeEEEcCCHH-
Confidence 34567999999999999999888642 54 257999997510001000013221 1232210 0123443
Q ss_pred HHhccCCcEEEeecCCC---C-----CC------CHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcc
Q 007112 432 AVKAIKPTMLMGTSGVG---K-----TF------TKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTW 488 (617)
Q Consensus 432 aV~~vkPtvLIG~S~~~---g-----~F------teevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~w 488 (617)
+++. .|++|=+.+.+ | +| -+++.+.|+++++.-+|+-.|||.. ...+-+++.
T Consensus 84 ~~~~--aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvd---i~t~~~~k~ 149 (331)
T 4aj2_A 84 VTAN--SKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPVD---ILTYVAWKI 149 (331)
T ss_dssp GGTT--EEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH---HHHHHHHHH
T ss_pred HhCC--CCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHH---HHHHHHHHH
Confidence 5666 88887444443 2 12 2477888889999999999999973 334444444
No 217
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=73.33 E-value=17 Score=37.57 Aligned_cols=93 Identities=18% Similarity=0.362 Sum_probs=49.8
Q ss_pred HHHHHHHhC-CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcc
Q 007112 344 ILSALKLVG-GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE 422 (617)
Q Consensus 344 ll~Alr~~g-~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~ 422 (617)
.+.|+...+ ..-.+++++|+|||..|...+.+... .|. ++++.+|+. . .+..+|+.
T Consensus 200 a~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~----~--------~~~~~~~~ 256 (404)
T 3ip1_A 200 AYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKH-----AGA------SKVILSEPS----E--------VRRNLAKE 256 (404)
T ss_dssp HHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC----H--------HHHHHHHH
T ss_pred HHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----H--------HHHHHHHH
Confidence 344444333 34467899999998777655444432 364 578877753 1 12223321
Q ss_pred -------cCCCCCHHHHHhc----cCCcEEEeecCCCCCCCHHHHHHH
Q 007112 423 -------HAPIKSLLDAVKA----IKPTMLMGTSGVGKTFTKEVVEAM 459 (617)
Q Consensus 423 -------~~~~~~L~eaV~~----vkPtvLIG~S~~~g~Fteevv~~M 459 (617)
.....++.+.|+. -+.|+.|-+++......+..++.+
T Consensus 257 lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l 304 (404)
T 3ip1_A 257 LGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVI 304 (404)
T ss_dssp HTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHH
T ss_pred cCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHH
Confidence 0112356665554 368899887764322233444444
No 218
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=73.18 E-value=7.8 Score=42.54 Aligned_cols=98 Identities=11% Similarity=0.231 Sum_probs=55.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCc-hhchhhhcccCCCCCHH----H
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ-HFKKPWAHEHAPIKSLL----D 431 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~-~~k~~fA~~~~~~~~L~----e 431 (617)
+.|||++|||+.|-++|.+|++. .++. ..+|.+.|++- .+.+ +. .....+....-...+.. .
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~----~dv~----~~~I~vaD~~~----~~~~-~~~~~g~~~~~~~Vdadnv~~~l~a 79 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEK----FDIK----PSQVTIIAAEG----TKVD-VAQQYGVSFKLQQITPQNYLEVIGS 79 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHH----BCCC----GGGEEEEESSC----CSCC-HHHHHTCEEEECCCCTTTHHHHTGG
T ss_pred CCCEEEECcCHHHHHHHHHHHhC----CCCc----eeEEEEeccch----hhhh-HHhhcCCceeEEeccchhHHHHHHH
Confidence 47899999999999999999764 2432 14688888752 1111 11 11112221111112332 3
Q ss_pred HHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007112 432 AVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN 473 (617)
Q Consensus 432 aV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 473 (617)
+|+. +|++|=+| ...++.+++++-.+. .=-.+-++|
T Consensus 80 Ll~~--~DvVIN~s--~~~~~l~Im~aclea--Gv~YlDTa~ 115 (480)
T 2ph5_A 80 TLEE--NDFLIDVS--IGISSLALIILCNQK--GALYINAAT 115 (480)
T ss_dssp GCCT--TCEEEECC--SSSCHHHHHHHHHHH--TCEEEESSC
T ss_pred HhcC--CCEEEECC--ccccCHHHHHHHHHc--CCCEEECCC
Confidence 4544 59999544 346788888876532 123455555
No 219
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=73.06 E-value=2 Score=44.81 Aligned_cols=107 Identities=15% Similarity=0.301 Sum_probs=64.3
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhccc-CCCCCHHHH
Q 007112 355 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH-APIKSLLDA 432 (617)
Q Consensus 355 l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~-~~~~~L~ea 432 (617)
+...||.|+|| |..|..+|-.++. .|+ ...+.++|.+-=..++-.-+|.+. .|.... .-..++.++
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~-----~g~-----~~evvLiDi~~~k~~g~a~DL~~~--~~~~~~i~~t~d~~~a 73 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAM-----MRL-----TPNLCLYDPFAVGLEGVAEEIRHC--GFEGLNLTFTSDIKEA 73 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHH-----TTC-----CSCEEEECSCHHHHHHHHHHHHHH--CCTTCCCEEESCHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----cCC-----CCEEEEEeCCchhHHHHHHhhhhC--cCCCCceEEcCCHHHH
Confidence 34679999998 9999999865543 365 246999997410001000013322 231100 012578899
Q ss_pred HhccCCcEEEeecCCC---CC-----------CCHHHHHHHHcCCCCcE-EEecCCCC
Q 007112 433 VKAIKPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPV-IFALSNPT 475 (617)
Q Consensus 433 V~~vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPI-IFaLSNPt 475 (617)
++. .|++|=+.+.+ |- .-+++++.+.+++..-+ |+-.|||.
T Consensus 74 l~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPv 129 (343)
T 3fi9_A 74 LTD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPA 129 (343)
T ss_dssp HTT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSH
T ss_pred hCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCch
Confidence 987 89888554433 21 23467777888888885 88899996
No 220
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=72.86 E-value=14 Score=38.96 Aligned_cols=115 Identities=11% Similarity=0.149 Sum_probs=64.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHH
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAV 433 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 433 (617)
.++.+||+|+|.|.+|++.|+.+.+ .|. ++...|++-..... ..|. .-.++-..+ .. .+++
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~-----~G~-------~v~~~D~~~~~~~~--~~l~-~G~~~~~g~---~~-~~~~ 62 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLA-----RGV-------TPRVMDTRMTPPGL--DKLP-EAVERHTGS---LN-DEWL 62 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHT-----TTC-------CCEEEESSSSCTTG--GGSC-TTSCEEESS---CC-HHHH
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHh-----CCC-------EEEEEECCCCcchh--HHhh-CCCEEEECC---Cc-HHHh
Confidence 3567899999999999999866643 363 57788886432100 1122 111110011 12 5667
Q ss_pred hccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEeeCCCCCcceeCCee
Q 007112 434 KAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKGQAIFASGSPFDPVEYNGKV 510 (617)
Q Consensus 434 ~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wT~GraifASGSPF~pv~~~Gk~ 510 (617)
+ .++.+|=.++.+. -.+++..+.. ...|++ + . .|-++...+.+.|-.||| ||||
T Consensus 63 ~--~~d~vV~s~gi~~-~~p~~~~a~~--~~~~v~---~----~----~~~~~~~~~~~vI~VTGT-------nGKT 116 (439)
T 2x5o_A 63 M--AADLIVASPGIAL-AHPSLSAAAD--AGIEIV---G----D----IELFCREAQAPIVAITGS-------NGKS 116 (439)
T ss_dssp H--TCSEEEECTTSCT-TCHHHHHHHH--TTCEEE---C----H----HHHHHHHCCSCEEEEECS-------SSHH
T ss_pred c--cCCEEEeCCCCCC-CCHHHHHHHH--CCCcEE---E----H----HHHHHHhcCCCEEEEECC-------CCHH
Confidence 6 4788875555542 3466665443 234443 1 1 233444456788888997 7774
No 221
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=72.76 E-value=2.2 Score=45.99 Aligned_cols=37 Identities=27% Similarity=0.433 Sum_probs=32.5
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.|++.||+++|||..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 37 ~L~~~~VlvvG~GGlGs~va~~La~a-----Gv------g~i~ivD~D 73 (434)
T 1tt5_B 37 LLDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 73 (434)
T ss_dssp HHHTCCEEEECSSTHHHHHHHHHHHT-----TC------CCEEEEECC
T ss_pred HhcCCEEEEECcCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 45688999999999999999999875 76 789999987
No 222
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=71.99 E-value=3.3 Score=40.60 Aligned_cols=32 Identities=16% Similarity=0.239 Sum_probs=25.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
-||.|+|+|..|..+|..+... | .+++++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-----G-------YSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhC-----C-------CEEEEEeCC
Confidence 3899999999999999888642 5 257888864
No 223
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=71.71 E-value=6.3 Score=39.23 Aligned_cols=32 Identities=16% Similarity=0.272 Sum_probs=25.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.||.|+|+|..|.++|..+.. .|. +++++|++
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~-----~G~-------~V~~~dr~ 47 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTE-----WPG-------GVTVYDIR 47 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTT-----STT-------CEEEECSS
T ss_pred CeEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEeCC
Confidence 589999999999999998864 253 57888874
No 224
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=71.68 E-value=3.9 Score=41.46 Aligned_cols=33 Identities=30% Similarity=0.386 Sum_probs=26.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.||.|+|+|..|.++|..+... |. .+++++|++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-----G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-----NA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 5899999999999999988653 51 368888876
No 225
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=71.34 E-value=7 Score=38.18 Aligned_cols=103 Identities=13% Similarity=0.211 Sum_probs=57.6
Q ss_pred CCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchh----chhhhc-ccCCCCCH
Q 007112 356 ADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHF----KKPWAH-EHAPIKSL 429 (617)
Q Consensus 356 ~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~----k~~fA~-~~~~~~~L 429 (617)
++.+|+|.|| |-.|..+++.|++ .| .+++.+|++.--.. .+.+... +..+.. +..+..++
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~ 67 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLE-----KG-------YEVYGADRRSGEFA--SWRLKELGIENDVKIIHMDLLEFSNI 67 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECSCCSTTT--THHHHHTTCTTTEEECCCCTTCHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CC-------CEEEEEECCCcccc--cccHhhccccCceeEEECCCCCHHHH
Confidence 4678999998 7777777777654 25 36888887521000 0001100 011111 11122357
Q ss_pred HHHHhccCCcEEEeecCCCCC------C----------CHHHHHHHHcCCC-CcEEEecC
Q 007112 430 LDAVKAIKPTMLMGTSGVGKT------F----------TKEVVEAMASFNE-KPVIFALS 472 (617)
Q Consensus 430 ~eaV~~vkPtvLIG~S~~~g~------F----------teevv~~Ma~~~e-rPIIFaLS 472 (617)
.++++.+++|++|=+.+.... + |..+++++.+... +.|||.=|
T Consensus 68 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (345)
T 2z1m_A 68 IRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAST 127 (345)
T ss_dssp HHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 788888899999988876421 0 3445666554443 67887644
No 226
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=71.26 E-value=8.7 Score=37.92 Aligned_cols=97 Identities=14% Similarity=0.164 Sum_probs=58.2
Q ss_pred CCCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHH
Q 007112 353 GTLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLD 431 (617)
Q Consensus 353 ~~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 431 (617)
++++..+|+|.|| |-.|..+++.|++ .| -+++.+|+.. .. ..+.. +.-+..+..++.+
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~~-~~~~~----~~~Dl~d~~~~~~ 73 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRT-----QG-------RTVRGFDLRP----SG-TGGEE----VVGSLEDGQALSD 73 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHH-----TT-------CCEEEEESSC----CS-SCCSE----EESCTTCHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHh-----CC-------CEEEEEeCCC----CC-CCccE----EecCcCCHHHHHH
Confidence 4577889999998 8888888877764 25 3578887752 11 11111 1112222345778
Q ss_pred HHhccCCcEEEeecCCCCCC--------------CHHHHHHHHcCCCCcEEEecC
Q 007112 432 AVKAIKPTMLMGTSGVGKTF--------------TKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 432 aV~~vkPtvLIG~S~~~g~F--------------teevv~~Ma~~~erPIIFaLS 472 (617)
+++ ++|++|=+.+....- |..+++++.+..-+.|||.=|
T Consensus 74 ~~~--~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 74 AIM--GVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp HHT--TCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHh--CCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 887 599999877654321 345888888777778998655
No 227
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=70.93 E-value=1.5 Score=45.72 Aligned_cols=116 Identities=12% Similarity=0.089 Sum_probs=68.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhccc--CCCCCHHHHHh
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH--APIKSLLDAVK 434 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~--~~~~~L~eaV~ 434 (617)
..||.|+|||..|.++|..++.. |+ -..+.++|.+-=..++-..+|.+. .+|.... ....++.+ ++
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~-----g~-----~~ev~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~t~d~~~-~~ 88 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMK-----DL-----ADEVALVDVMEDKLKGEMMDLEHG-SLFLHTAKIVSGKDYSV-SA 88 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHH-----CC-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSCCSEEEEESSSCS-CS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECCHHHHHHHHHHhhhh-hhcccCCeEEEcCCHHH-hC
Confidence 47999999999999999988753 54 247999997410000000012221 2333211 01134443 55
Q ss_pred ccCCcEEEeecCCC---C-----CC------CHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccc
Q 007112 435 AIKPTMLMGTSGVG---K-----TF------TKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWS 489 (617)
Q Consensus 435 ~vkPtvLIG~S~~~---g-----~F------teevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wT 489 (617)
. .|++|=+.+.+ | +| -+++++.+.++++.-+|+-.|||.. ....-+++.+
T Consensus 89 d--aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPvd---i~t~~~~k~s 152 (330)
T 3ldh_A 89 G--SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELGT---DKNKQDWKLS 152 (330)
T ss_dssp S--CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH---HHHHHHHHHH
T ss_pred C--CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCccH---HHHHHHHHHh
Confidence 5 89888443333 2 12 2467778888999999999999972 3344455544
No 228
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=70.64 E-value=9 Score=37.36 Aligned_cols=79 Identities=14% Similarity=0.191 Sum_probs=44.6
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHH
Q 007112 352 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLD 431 (617)
Q Consensus 352 g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 431 (617)
..+++++++||.||++ ||...|+..+.+ .| -+++++|++.- .+......+.-|..+..++.+
T Consensus 9 ~~~~~~k~vlVTGas~---GIG~aia~~l~~-~G-------~~V~~~~r~~~-------~~~~~~~~~~~Dv~~~~~v~~ 70 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSS---GIGLAVVDALVR-YG-------AKVVSVSLDEK-------SDVNVSDHFKIDVTNEEEVKE 70 (269)
T ss_dssp -CTTTTCEEEESSTTS---HHHHHHHHHHHH-TT-------CEEEEEESCC---------CTTSSEEEECCTTCHHHHHH
T ss_pred ccCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCch-------hccCceeEEEecCCCHHHHHH
Confidence 4578899999999864 455555555554 36 35888886521 111111112112222234556
Q ss_pred HHhcc-----CCcEEEeecCCC
Q 007112 432 AVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 432 aV~~v-----kPtvLIG~S~~~ 448 (617)
+++.+ ++|+||=..+..
T Consensus 71 ~~~~~~~~~g~iD~lv~nAg~~ 92 (269)
T 3vtz_A 71 AVEKTTKKYGRIDILVNNAGIE 92 (269)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCcC
Confidence 66655 899999777654
No 229
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=70.60 E-value=3.7 Score=40.71 Aligned_cols=36 Identities=19% Similarity=0.345 Sum_probs=28.8
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
+..+|+|+|||.||+..|..+.+ .|. .++.++|+..
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~-----~g~------~~v~lie~~~ 38 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKD-----FGI------TDVIILEKGT 38 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHH-----cCC------CcEEEEecCC
Confidence 35689999999999999998854 253 2799999874
No 230
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=70.32 E-value=4.5 Score=40.47 Aligned_cols=93 Identities=20% Similarity=0.312 Sum_probs=53.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhh---c-------cc--CC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA---H-------EH--AP 425 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA---~-------~~--~~ 425 (617)
.||.|+|+|..|..+|..+... | .+++++|++. .+ +...++... . .. ..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-----g-------~~V~~~~r~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-----G-------QSVLAWDIDA----QR---IKEIQDRGAIIAEGPGLAGTAHPDLL 65 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCH----HH---HHHHHHHTSEEEESSSCCEEECCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC-----C-------CEEEEEeCCH----HH---HHHHHhcCCeEEecccccccccccee
Confidence 5899999999999999887642 5 3588888741 11 111111000 0 00 01
Q ss_pred CCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcC-CCCcEEEecCC
Q 007112 426 IKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASF-NEKPVIFALSN 473 (617)
Q Consensus 426 ~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSN 473 (617)
..++.++++. +|++|=+.. . -..+++++.++.. .+..+|+.+.|
T Consensus 66 ~~~~~~~~~~--~D~vi~~v~-~-~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 66 TSDIGLAVKD--ADVILIVVP-A-IHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp ESCHHHHHTT--CSEEEECSC-G-GGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred cCCHHHHHhc--CCEEEEeCC-c-hHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 2467787764 787763332 2 2357888887653 33455666644
No 231
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=69.94 E-value=11 Score=36.65 Aligned_cols=93 Identities=12% Similarity=0.184 Sum_probs=58.6
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhc
Q 007112 358 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKA 435 (617)
Q Consensus 358 ~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~ 435 (617)
.||+|.|| |-.|..+++.|++ .| .+++.+++. .+..+ +. ...+.. +.. ..++.++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~----~~~~~-~~--~~~~~~~Dl~-~~~~~~~~~- 61 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKN-----DG-------NTPIILTRS----IGNKA-IN--DYEYRVSDYT-LEDLINQLN- 61 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESC----CC--------CCEEEECCCC-HHHHHHHTT-
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCC----CCccc-CC--ceEEEEcccc-HHHHHHhhc-
Confidence 58999995 8888888887764 25 368888886 22211 22 111111 222 345677777
Q ss_pred cCCcEEEeecCCCCCC------------CHHHHHHHHcCCCCcEEEecC
Q 007112 436 IKPTMLMGTSGVGKTF------------TKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 436 vkPtvLIG~S~~~g~F------------teevv~~Ma~~~erPIIFaLS 472 (617)
++|++|=+.+..+.- |..+++++.+.+-+-+||.=|
T Consensus 62 -~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 62 -DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp -TCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 699999887765321 477888888777667888544
No 232
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=69.68 E-value=4.1 Score=40.64 Aligned_cols=32 Identities=22% Similarity=0.268 Sum_probs=25.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
-||+|+|||.||+-.|-.|.+ .|+ ++.++|++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~-----~G~-------~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK-----HGI-------KVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 389999999999999988865 375 46677754
No 233
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=69.44 E-value=3.2 Score=47.09 Aligned_cols=37 Identities=27% Similarity=0.379 Sum_probs=32.9
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.|++.||+++|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 14 kL~~s~VlVVGaGGLGsevak~La~a-----GV------G~ItlvD~D 50 (640)
T 1y8q_B 14 AVAGGRVLVVGAGGIGCELLKNLVLT-----GF------SHIDLIDLD 50 (640)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEECC
T ss_pred HHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 46789999999999999999999875 76 689999987
No 234
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=69.40 E-value=2.7 Score=36.60 Aligned_cols=34 Identities=24% Similarity=0.489 Sum_probs=26.6
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
...+|+|+|+|..|..+|+.+.. .| .+++++|++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~-----~g-------~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTA-----AG-------KKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEECC
Confidence 34689999999999999988864 25 358888874
No 235
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=68.83 E-value=7.3 Score=37.19 Aligned_cols=93 Identities=13% Similarity=0.173 Sum_probs=56.2
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHH
Q 007112 354 TLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDA 432 (617)
Q Consensus 354 ~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ea 432 (617)
.++..+|+|.|| |-.|..+++.|.+ .|.. ..... ..+...+ -+..+..++.++
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g~~---~~~~~--------------~~~~~~~----~D~~d~~~~~~~ 56 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVAD-----GAGL---PGEDW--------------VFVSSKD----ADLTDTAQTRAL 56 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHT-----TTCC---TTCEE--------------EECCTTT----CCTTSHHHHHHH
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHh-----cCCc---ccccc--------------cccCcee----cccCCHHHHHHH
Confidence 467789999996 8888888777754 2530 00000 0011000 011122357888
Q ss_pred HhccCCcEEEeecCCCCC-----------------CCHHHHHHHHcCCCCcEEEecC
Q 007112 433 VKAIKPTMLMGTSGVGKT-----------------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 433 V~~vkPtvLIG~S~~~g~-----------------Fteevv~~Ma~~~erPIIFaLS 472 (617)
++..++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 57 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS 113 (319)
T 4b8w_A 57 FEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLS 113 (319)
T ss_dssp HHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcc
Confidence 988899999988776431 1345788887777677888544
No 236
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=68.76 E-value=19 Score=35.96 Aligned_cols=101 Identities=15% Similarity=0.223 Sum_probs=61.7
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCch-hchhhhc-ccC-CCCCH
Q 007112 354 TLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH-FKKPWAH-EHA-PIKSL 429 (617)
Q Consensus 354 ~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~-~k~~fA~-~~~-~~~~L 429 (617)
.++..+|+|.|| |-.|..+++.|++. .| -+++.+|+.. ++...+.. .+..+.. +.. +..++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~----~~~~~~~~~~~v~~~~~Dl~~d~~~~ 85 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT----DRLGDLVKHERMHFFEGDITINKEWV 85 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC----TTTGGGGGSTTEEEEECCTTTCHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh----hhhhhhccCCCeEEEeCccCCCHHHH
Confidence 466789999995 88888888877653 13 4688888752 11111111 1111211 212 23357
Q ss_pred HHHHhccCCcEEEeecCCCC----------------CCCHHHHHHHHcCCCCcEEEecC
Q 007112 430 LDAVKAIKPTMLMGTSGVGK----------------TFTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 430 ~eaV~~vkPtvLIG~S~~~g----------------~Fteevv~~Ma~~~erPIIFaLS 472 (617)
.++++. +|++|=+.+... .-|..+++++.+.. +.+||.=|
T Consensus 86 ~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS 141 (372)
T 3slg_A 86 EYHVKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPST 141 (372)
T ss_dssp HHHHHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECC
T ss_pred HHHhcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCc
Confidence 778885 999997666432 23567899988777 78888655
No 237
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=68.72 E-value=10 Score=36.51 Aligned_cols=30 Identities=17% Similarity=0.197 Sum_probs=23.9
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc
Q 007112 359 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 400 (617)
Q Consensus 359 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~ 400 (617)
||.|+|+|..|..+|..+... |. +++++|+
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~-----g~-------~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSR-----GV-------EVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----TC-------EEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHC-----CC-------eEEEeCC
Confidence 789999999999999988652 53 5776665
No 238
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=68.55 E-value=13 Score=35.55 Aligned_cols=78 Identities=15% Similarity=0.218 Sum_probs=44.1
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHH
Q 007112 352 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLD 431 (617)
Q Consensus 352 g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 431 (617)
..++++.++||.||++ ||...++..+.+ .| -+++++|++- ++.+.+. .+.-|..+..++.+
T Consensus 10 ~~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~~~~~~~----~~~~D~~~~~~~~~ 70 (247)
T 1uzm_A 10 KPPFVSRSVLVTGGNR---GIGLAIAQRLAA-DG-------HKVAVTHRGS----GAPKGLF----GVEVDVTDSDAVDR 70 (247)
T ss_dssp CCCCCCCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESSS----CCCTTSE----EEECCTTCHHHHHH
T ss_pred cccCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----HHHHHhc----CeeccCCCHHHHHH
Confidence 3468889999999753 455555555554 36 3688888751 1111121 11112122234555
Q ss_pred HHhcc-----CCcEEEeecCCC
Q 007112 432 AVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 432 aV~~v-----kPtvLIG~S~~~ 448 (617)
+++.+ ++|+||=..+..
T Consensus 71 ~~~~~~~~~g~id~lv~~Ag~~ 92 (247)
T 1uzm_A 71 AFTAVEEHQGPVEVLVSNAGLS 92 (247)
T ss_dssp HHHHHHHHHSSCSEEEEECSCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 55544 689999887754
No 239
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=68.40 E-value=6.6 Score=40.08 Aligned_cols=41 Identities=20% Similarity=0.357 Sum_probs=26.6
Q ss_pred HHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007112 429 LLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSN 473 (617)
Q Consensus 429 L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSN 473 (617)
+...++..|||++||..+-. --.....|+....|+|.=-+|
T Consensus 84 ~~~~l~~~~PDvVi~~g~~~----s~p~~laA~~~~iP~vihe~n 124 (365)
T 3s2u_A 84 ALRVIRQLRPVCVLGLGGYV----TGPGGLAARLNGVPLVIHEQN 124 (365)
T ss_dssp HHHHHHHHCCSEEEECSSST----HHHHHHHHHHTTCCEEEEECS
T ss_pred HHHHHHhcCCCEEEEcCCcc----hHHHHHHHHHcCCCEEEEecc
Confidence 34568889999999986643 112222345567899975555
No 240
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=68.19 E-value=1.7 Score=45.05 Aligned_cols=120 Identities=16% Similarity=0.105 Sum_probs=71.8
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC---cccCCcccCCchhchhhhcccCCCCCHHHHH
Q 007112 358 QTFLFLG-AGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG---LIVSSRKESLQHFKKPWAHEHAPIKSLLDAV 433 (617)
Q Consensus 358 ~riv~~G-AGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G---Li~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 433 (617)
.||+|.| ||..|.-+|-+|+. .|+-.++-.-.+.|+|.+. .+.-... +|.+.-.+|.++.....++.+++
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~-----~~~~~e~~~~~l~L~Di~~~~~~~~g~a~-DL~~~~~~~~~~~~~~~~~~~~~ 77 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGN-----GSVFGKDQPIILVLLDITPMMGVLDGVLM-ELQDCALPLLKDVIATDKEEIAF 77 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHH-HHHHTCCTTEEEEEEESCHHHHT
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CCCccccCCCEEEEEeCCCccccchhhHh-hhHhhhhcccCCEEEcCCcHHHh
Confidence 5899999 79999998888764 2441110011389999852 1111111 24332234433222235788889
Q ss_pred hccCCcEEEeecCCC---CC-----------CCHHHHHHHHcCCCCcE-EEecCCCCCCCCCCHHHHhcc
Q 007112 434 KAIKPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPV-IFALSNPTSQSECTAEEAYTW 488 (617)
Q Consensus 434 ~~vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPI-IFaLSNPt~~aEct~edA~~w 488 (617)
+. .|++|=+.+.+ |- ..+++++++.+++.+-+ |+-.|||. ..+..-+++.
T Consensus 78 ~d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPv---d~~t~~~~~~ 142 (333)
T 5mdh_A 78 KD--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPA---NTNCLTASKS 142 (333)
T ss_dssp TT--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH---HHHHHHHHHT
T ss_pred CC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCch---HHHHHHHHHH
Confidence 87 89888555543 21 24678888888888774 99999996 3344444443
No 241
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=67.82 E-value=5.8 Score=38.24 Aligned_cols=86 Identities=13% Similarity=0.246 Sum_probs=55.0
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccC
Q 007112 359 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 437 (617)
Q Consensus 359 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 437 (617)
||+|.|| |-.|..+++.|+ . | .+++.+|++.-... -+..+..++.++++..+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-----g-------~~V~~~~r~~~~~~--------------~D~~d~~~~~~~~~~~~ 54 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-----V-------GNLIALDVHSKEFC--------------GDFSNPKGVAETVRKLR 54 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-----T-------SEEEEECTTCSSSC--------------CCTTCHHHHHHHHHHHC
T ss_pred eEEEECCCCHHHHHHHHHhh-c-----C-------CeEEEecccccccc--------------ccCCCHHHHHHHHHhcC
Confidence 7899998 877777777664 2 4 36888877531110 01111235778888778
Q ss_pred CcEEEeecCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007112 438 PTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 438 PtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 472 (617)
+|++|=+.+.... .|..+++++.+..- .+||.=|
T Consensus 55 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 104 (299)
T 1n2s_A 55 PDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYST 104 (299)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEE
T ss_pred CCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEec
Confidence 9999988876531 14667777766544 5887654
No 242
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=67.62 E-value=4 Score=39.71 Aligned_cols=34 Identities=12% Similarity=0.326 Sum_probs=27.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
..+|+|+|||.||+..|..+.+ .|+ ++.++|+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRR-----SGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----SSC-------CEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 4689999999999999988864 353 589999874
No 243
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=67.27 E-value=15 Score=36.62 Aligned_cols=32 Identities=19% Similarity=0.339 Sum_probs=25.7
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 358 QTFLFLG-AGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 358 ~riv~~G-AGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.||.|+| +|..|..+|..+.. .|. +++++|++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~-----~G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRA-----SGY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHT-----TTC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 5899999 99999999998864 253 58888864
No 244
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=66.98 E-value=17 Score=37.68 Aligned_cols=85 Identities=21% Similarity=0.346 Sum_probs=66.3
Q ss_pred chhHHHHHHHHHHHHHhCCCCCCceEEEeCcCh-HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCc
Q 007112 335 GTASVVLAGILSALKLVGGTLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ 413 (617)
Q Consensus 335 GTaaV~LAgll~Alr~~g~~l~d~riv~~GAGs-Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~ 413 (617)
+-.-+|-.|++--|+..+.+|+..++|++|.+. .|.-+|-||.. .|. .+.+|.++
T Consensus 157 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~-----~~A-------TVTi~Hs~------------ 212 (303)
T 4b4u_A 157 AYGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQ-----ANA-------TVTICHSR------------ 212 (303)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHH-----TTC-------EEEEECTT------------
T ss_pred cccCccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHh-----cCC-------EEEEecCC------------
Confidence 344578889999999999999999999999765 57777777653 243 35555442
Q ss_pred hhchhhhcccCCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHH
Q 007112 414 HFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVE 457 (617)
Q Consensus 414 ~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~ 457 (617)
..+|.+.+++ +|+||...|.++.++.++|+
T Consensus 213 ------------T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk 242 (303)
T 4b4u_A 213 ------------TQNLPELVKQ--ADIIVGAVGKAELIQKDWIK 242 (303)
T ss_dssp ------------CSSHHHHHHT--CSEEEECSCSTTCBCGGGSC
T ss_pred ------------CCCHHHHhhc--CCeEEeccCCCCcccccccc
Confidence 2358888887 99999999999999999886
No 245
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=66.92 E-value=9.3 Score=37.24 Aligned_cols=79 Identities=10% Similarity=0.127 Sum_probs=44.1
Q ss_pred CCCCceEEEeCcC-h--HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc------ccC
Q 007112 354 TLADQTFLFLGAG-E--AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH------EHA 424 (617)
Q Consensus 354 ~l~d~riv~~GAG-s--Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~------~~~ 424 (617)
.+++.++||.||. . .|..||+.+++ .| -+++++|++-+ . +.+...+..+.+ |..
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G-------~~V~~~~r~~~--~---~~~~~l~~~~~~~~~~~~Dl~ 85 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHR-----EG-------AELAFTYVGQF--K---DRVEKLCAEFNPAAVLPCDVI 85 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHH-----TT-------CEEEEEECTTC--H---HHHHHHHGGGCCSEEEECCTT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHH-----cC-------CEEEEeeCchH--H---HHHHHHHHhcCCceEEEeecC
Confidence 4778899999984 3 45555655543 36 35888888641 0 112221111111 111
Q ss_pred CCCCHHHHHhcc-----CCcEEEeecCCCC
Q 007112 425 PIKSLLDAVKAI-----KPTMLMGTSGVGK 449 (617)
Q Consensus 425 ~~~~L~eaV~~v-----kPtvLIG~S~~~g 449 (617)
...++.++++.+ ++|+||=..+...
T Consensus 86 ~~~~v~~~~~~~~~~~g~id~li~nAg~~~ 115 (280)
T 3nrc_A 86 SDQEIKDLFVELGKVWDGLDAIVHSIAFAP 115 (280)
T ss_dssp CHHHHHHHHHHHHHHCSSCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccCC
Confidence 223455666555 7999998877653
No 246
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=66.77 E-value=32 Score=35.49 Aligned_cols=111 Identities=16% Similarity=0.161 Sum_probs=71.4
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHH
Q 007112 352 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLD 431 (617)
Q Consensus 352 g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 431 (617)
|..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+. .+ + ..... .....+|.|
T Consensus 136 ~~~l~g~tvGIiG~G~IG~~va~~~~~f-----g~-------~v~~~d~~-----~~-~---~~~~~----~~~~~~l~e 190 (334)
T 3kb6_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KVLCYDVV-----KR-E---DLKEK----GCVYTSLDE 190 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS-----CC-H---HHHHT----TCEECCHHH
T ss_pred cceecCcEEEEECcchHHHHHHHhhccc-----Cc-------eeeecCCc-----cc-h---hhhhc----CceecCHHH
Confidence 4678899999999999999999888543 54 57777753 11 1 11111 112357999
Q ss_pred HHhccCCcEEEee----cCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcc--ccCcEEEe
Q 007112 432 AVKAIKPTMLMGT----SGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTW--SKGQAIFA 496 (617)
Q Consensus 432 aV~~vkPtvLIG~----S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~w--T~GraifA 496 (617)
.++. .|+++=. ...-++|+++.++.|. +..++.=.|. -++-=|+|+-. ..|+.--|
T Consensus 191 ll~~--sDivslh~Plt~~T~~li~~~~l~~mk---~~a~lIN~aR----G~iVde~aL~~aL~~g~i~gA 252 (334)
T 3kb6_A 191 LLKE--SDVISLHVPYTKETHHMINEERISLMK---DGVYLINTAR----GKVVDTDALYRAYQRGKFSGL 252 (334)
T ss_dssp HHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTEEEEECSC----GGGBCHHHHHHHHHTTCEEEE
T ss_pred HHhh--CCEEEEcCCCChhhccCcCHHHHhhcC---CCeEEEecCc----cccccHHHHHHHHHhCCceEE
Confidence 9987 8888743 2234799999999995 5566665444 45554544421 35664433
No 247
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=66.75 E-value=10 Score=38.85 Aligned_cols=79 Identities=16% Similarity=0.147 Sum_probs=44.7
Q ss_pred HHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcc---
Q 007112 346 SALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE--- 422 (617)
Q Consensus 346 ~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~--- 422 (617)
.|+......-.+++|+|+|||..|...+.+... .|. ++++.+|+. ..| ..+|+.
T Consensus 183 ~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~-----~Ga------~~Vi~~~~~----~~~--------~~~a~~lGa 239 (378)
T 3uko_A 183 GAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKT-----AGA------SRIIGIDID----SKK--------YETAKKFGV 239 (378)
T ss_dssp HHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHH-----HTC------SCEEEECSC----TTH--------HHHHHTTTC
T ss_pred HHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcCC----HHH--------HHHHHHcCC
Confidence 334333344467899999999877666554432 264 578888753 222 122221
Q ss_pred ------cCCCCCHHHHHhcc---CCcEEEeecCC
Q 007112 423 ------HAPIKSLLDAVKAI---KPTMLMGTSGV 447 (617)
Q Consensus 423 ------~~~~~~L~eaV~~v---kPtvLIG~S~~ 447 (617)
.+...++.+.|+.. +.|+.|=+++.
T Consensus 240 ~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~ 273 (378)
T 3uko_A 240 NEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGN 273 (378)
T ss_dssp CEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCC
T ss_pred cEEEccccCchhHHHHHHHhcCCCCCEEEECCCC
Confidence 11124566666543 57888877763
No 248
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=66.69 E-value=4.4 Score=42.31 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=26.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+||||+|+|.||+..|..|.+. +- .-+|.++|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-----MP-----DLKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CT-----TCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-----Cc-----CCeEEEEcCC
Confidence 4899999999999999988653 21 1368888875
No 249
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=66.61 E-value=6.1 Score=40.60 Aligned_cols=103 Identities=22% Similarity=0.292 Sum_probs=65.2
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCC--CCCHHHHHhc
Q 007112 359 TFLFLG-AGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAP--IKSLLDAVKA 435 (617)
Q Consensus 359 riv~~G-AGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~--~~~L~eaV~~ 435 (617)
||.|+| +|..|..+|-+|... .++ ...+.|+|..-. ..+..-+|.+. ++-..-.. ..+..++.+.
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~----~~~-----~~el~L~Di~~~-~~G~a~Dl~~~--~~~~~v~~~~~~~~~~~~~~ 69 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQ----LPS-----GSELSLYDIAPV-TPGVAVDLSHI--PTAVKIKGFSGEDATPALEG 69 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH----SCT-----TEEEEEECSSTT-HHHHHHHHHTS--CSSEEEEEECSSCCHHHHTT
T ss_pred EEEEECCCCHHHHHHHHHHHhC----CCC-----CceEEEEecCCC-chhHHHHhhCC--CCCceEEEecCCCcHHHhCC
Confidence 799999 899999998777542 133 257999999741 11111113221 11000000 1246788887
Q ss_pred cCCcEEEeecCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007112 436 IKPTMLMGTSGVG---KT-----------FTKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 436 vkPtvLIG~S~~~---g~-----------Fteevv~~Ma~~~erPIIFaLSNPt 475 (617)
.|+.|=+.+.+ |- .-+++++.+.++++.-+|+-.|||.
T Consensus 70 --aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv 121 (312)
T 3hhp_A 70 --ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPV 121 (312)
T ss_dssp --CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred --CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcc
Confidence 99988666554 21 1246777888899999999999997
No 250
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=65.96 E-value=18 Score=35.21 Aligned_cols=95 Identities=16% Similarity=0.225 Sum_probs=53.9
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccC
Q 007112 359 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 437 (617)
Q Consensus 359 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 437 (617)
+|+|.|| |-.|..+++.|++ .| .++.+++.. .++.+.+...-..+.-+..+ .++.++++ +
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~-----~g--------~~v~~~~~~---~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~--~ 63 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSE-----SN--------EIVVIDNLS---SGNEEFVNEAARLVKADLAA-DDIKDYLK--G 63 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-----TS--------CEEEECCCS---SCCGGGSCTTEEEECCCTTT-SCCHHHHT--T
T ss_pred EEEEECCCchHHHHHHHHHHh-----CC--------CEEEEEcCC---CCChhhcCCCcEEEECcCCh-HHHHHHhc--C
Confidence 7899997 6677666666643 23 344444321 11111121111111113333 67888887 5
Q ss_pred CcEEEeecCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007112 438 PTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 438 PtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 472 (617)
+|++|-+.+.... -|..++++|.+..-+.|||.=|
T Consensus 64 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 64 AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp CSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 9999988875421 1234778887777678998655
No 251
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=65.79 E-value=5.5 Score=37.86 Aligned_cols=32 Identities=28% Similarity=0.391 Sum_probs=26.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.+|+|+|||.||+..|..+... | .++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~-----g-------~~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRA-----R-------KNILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----C-------CCEEEEeCC
Confidence 5899999999999999888652 5 368999974
No 252
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=65.68 E-value=5.8 Score=38.18 Aligned_cols=90 Identities=11% Similarity=0.120 Sum_probs=53.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 437 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 437 (617)
.||.|+|+|..|..+|..+.. .| .+++++|++ .+ .+....+.+ ......++.|+++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~-----~g-------~~v~~~~~~----~~---~~~~~~~~~--g~~~~~~~~~~~~~-- 60 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQ-----TP-------HELIISGSS----LE---RSKEIAEQL--ALPYAMSHQDLIDQ-- 60 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-----SS-------CEEEEECSS----HH---HHHHHHHHH--TCCBCSSHHHHHHT--
T ss_pred cEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEECCC----HH---HHHHHHHHc--CCEeeCCHHHHHhc--
Confidence 389999999999999887743 24 468888864 11 122221111 11223578888874
Q ss_pred CcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007112 438 PTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 438 PtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 475 (617)
+|++|=+. .+ ...+++++.+. +..+|.-+++-.
T Consensus 61 ~D~Vi~~v-~~-~~~~~v~~~l~---~~~~vv~~~~~~ 93 (259)
T 2ahr_A 61 VDLVILGI-KP-QLFETVLKPLH---FKQPIISMAAGI 93 (259)
T ss_dssp CSEEEECS-CG-GGHHHHHTTSC---CCSCEEECCTTC
T ss_pred CCEEEEEe-Cc-HhHHHHHHHhc---cCCEEEEeCCCC
Confidence 88887433 23 35677777664 334666665543
No 253
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=65.63 E-value=12 Score=36.45 Aligned_cols=99 Identities=14% Similarity=0.175 Sum_probs=57.5
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhc
Q 007112 358 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKA 435 (617)
Q Consensus 358 ~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~ 435 (617)
.+|+|.|| |-.|..+++.|++ .| .+++.+|+.- ....+.+.. ...+.. +..+..++.++++.
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~ 65 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVD-----EG-------LSVVVVDNLQ---TGHEDAITE-GAKFYNGDLRDKAFLRDVFTQ 65 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCT-TSEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCC---cCchhhcCC-CcEEEECCCCCHHHHHHHHhh
Confidence 37899986 7777777777654 25 3688887641 111111221 111111 11222357778875
Q ss_pred cCCcEEEeecCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007112 436 IKPTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 436 vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 472 (617)
.++|++|=+.+.... -|..+++++.+..-+.+||.=|
T Consensus 66 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 118 (330)
T 2c20_A 66 ENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118 (330)
T ss_dssp SCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCC
Confidence 679999988775431 1346777777666567888544
No 254
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=65.50 E-value=7.8 Score=37.71 Aligned_cols=87 Identities=11% Similarity=0.150 Sum_probs=55.3
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhc
Q 007112 357 DQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKA 435 (617)
Q Consensus 357 d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~ 435 (617)
..+|+|.|| |-.|..+++.|++ .|. +++.+++. ... ++. +..++.++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~-------~v~~~~r~-----~~~-D~~-----------d~~~~~~~~~~ 53 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGD-------VELVLRTR-----DEL-NLL-----------DSRAVHDFFAS 53 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-----CTT-------EEEECCCT-----TTC-CTT-----------CHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-----CCC-------eEEEEecC-----ccC-Ccc-----------CHHHHHHHHHh
Confidence 468999996 7777777776643 252 46666543 111 121 12357778876
Q ss_pred cCCcEEEeecCCCCC-----------------CCHHHHHHHHcCCCCcEEEecC
Q 007112 436 IKPTMLMGTSGVGKT-----------------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 436 vkPtvLIG~S~~~g~-----------------Fteevv~~Ma~~~erPIIFaLS 472 (617)
+++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 54 ~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 54 ERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp HCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 689999988876531 2446777777666667888654
No 255
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=65.17 E-value=8.5 Score=37.01 Aligned_cols=97 Identities=14% Similarity=0.080 Sum_probs=57.8
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhcc
Q 007112 359 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKAI 436 (617)
Q Consensus 359 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~v 436 (617)
||+|.|| |-.|..+++.+.+. .| .++..++++. ++...+.+....+.. +-.+..+|.++++.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~R~~----~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~- 65 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIAN----HI-------DHFHIGVRNV----EKVPDDWRGKVSVRQLDYFNQESMVEAFKG- 65 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHT----TC-------TTEEEEESSG----GGSCGGGBTTBEEEECCTTCHHHHHHHTTT-
T ss_pred EEEEEcCCchHHHHHHHHHhhC----CC-------CcEEEEECCH----HHHHHhhhCCCEEEEcCCCCHHHHHHHHhC-
Confidence 6899996 88888888875431 13 3577777642 111112111111211 21222468888875
Q ss_pred CCcEEEeecCCCCC------CCHHHHHHHHcCCCCcEEEecC
Q 007112 437 KPTMLMGTSGVGKT------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 437 kPtvLIG~S~~~g~------Fteevv~~Ma~~~erPIIFaLS 472 (617)
.|++|=+++.... -++.++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 66 -MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp -CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 7999988775421 2567888888777677888544
No 256
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=64.64 E-value=11 Score=35.22 Aligned_cols=102 Identities=14% Similarity=0.114 Sum_probs=54.5
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-ccCCCCCHHHH
Q 007112 355 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDA 432 (617)
Q Consensus 355 l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~ea 432 (617)
+++.+++|.|| |-.|..+++.|++. |. ..+++++|++. ++.+.+......+.. |-.+..++.++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~-----G~-----~~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~ 81 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQ-----GL-----FSKVTLIGRRK----LTFDEEAYKNVNQEVVDFEKLDDYASA 81 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHH-----TC-----CSEEEEEESSC----CCCCSGGGGGCEEEECCGGGGGGGGGG
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcC-----CC-----CCEEEEEEcCC----CCccccccCCceEEecCcCCHHHHHHH
Confidence 44578999996 66677777766542 52 12788888752 111111111111111 11122345566
Q ss_pred HhccCCcEEEeecCCCCC-------------CCHHHHHHHHcCCCCcEEEecC
Q 007112 433 VKAIKPTMLMGTSGVGKT-------------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 433 V~~vkPtvLIG~S~~~g~-------------Fteevv~~Ma~~~erPIIFaLS 472 (617)
++ ++|++|=+.+.... -+..++++|.+...+-|||.=|
T Consensus 82 ~~--~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 82 FQ--GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp GS--SCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hc--CCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 66 58999988775420 1345666666554455666433
No 257
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=64.23 E-value=6.3 Score=39.80 Aligned_cols=38 Identities=16% Similarity=0.052 Sum_probs=28.0
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCc
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 403 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GL 403 (617)
+++..+|+|+|||.||+..|..|.+ .|+ ++.++|+.-.
T Consensus 8 ~m~~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~v~viE~~~~ 45 (379)
T 3alj_A 8 PGKTRRAEVAGGGFAGLTAAIALKQ-----NGW-------DVRLHEKSSE 45 (379)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecCCC
Confidence 3456799999999999999988765 363 6888887643
No 258
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=64.23 E-value=6.1 Score=37.93 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=27.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
..+|||+|||.||+..|..+.+ .|. ++.++|++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSAR-----YML-------KTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHH-----CCC-------cEEEEecc
Confidence 4689999999999999988865 253 58999997
No 259
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=64.20 E-value=14 Score=33.68 Aligned_cols=91 Identities=9% Similarity=0.139 Sum_probs=53.1
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchh--chhhhc-ccCCCCCHHHHHh
Q 007112 359 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHF--KKPWAH-EHAPIKSLLDAVK 434 (617)
Q Consensus 359 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~--k~~fA~-~~~~~~~L~eaV~ 434 (617)
||+|.|| |-.|..+++.|++ .| .+++.++++. + .+... ...+.. +..+..+ ++++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~----~---~~~~~~~~~~~~~~D~~d~~~--~~~~ 60 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKN-----RG-------HEVTAIVRNA----G---KITQTHKDINILQKDIFDLTL--SDLS 60 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESCS----H---HHHHHCSSSEEEECCGGGCCH--HHHT
T ss_pred eEEEEcCCchhHHHHHHHHHh-----CC-------CEEEEEEcCc----h---hhhhccCCCeEEeccccChhh--hhhc
Confidence 7999996 7778878777754 25 3688887751 1 11110 011111 1111112 6776
Q ss_pred ccCCcEEEeecCCCCC-------CCHHHHHHHHcCCCCcEEEecC
Q 007112 435 AIKPTMLMGTSGVGKT-------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 435 ~vkPtvLIG~S~~~g~-------Fteevv~~Ma~~~erPIIFaLS 472 (617)
. +|++|=+.+.+.. .++.++++|.+...+.+||.-|
T Consensus 61 ~--~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 61 D--QNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp T--CSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred C--CCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 5 8999988776432 1367888887765566777544
No 260
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=63.57 E-value=6.2 Score=40.56 Aligned_cols=37 Identities=32% Similarity=0.480 Sum_probs=29.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcc
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 404 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi 404 (617)
++|||+|||.||+..|..|.+ .|.+ .+|.++|+..-.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQ-----AKYP-----GRIALINDEKHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEECCSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHh-----hCcC-----CCEEEEeCCCCC
Confidence 589999999999999998865 3541 379999987633
No 261
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=63.50 E-value=6.3 Score=38.56 Aligned_cols=34 Identities=21% Similarity=0.278 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
..+|+|+|||.||+..|..+.+ .| .++.++|++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGM-----RG-------LSFRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEeCCC
Confidence 4689999999999999988754 25 3689999864
No 262
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=63.35 E-value=8 Score=36.85 Aligned_cols=81 Identities=15% Similarity=0.149 Sum_probs=44.4
Q ss_pred CCCCCCceEEEeCcC---hHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc------c
Q 007112 352 GGTLADQTFLFLGAG---EAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH------E 422 (617)
Q Consensus 352 g~~l~d~riv~~GAG---sAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~------~ 422 (617)
..+++++++||.||+ -.|.+||+.+++ .| -+++++|++. ...+.+......+.+ |
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~-----~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~D 72 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKR-----EG-------AELAFTYVGD----RFKDRITEFAAEFGSELVFPCD 72 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESSG----GGHHHHHHHHHHTTCCCEEECC
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHH-----cC-------CCEEEEecch----hhHHHHHHHHHHcCCcEEEECC
Confidence 356889999999984 345556665543 36 3688888762 111112211111111 1
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEeecCCC
Q 007112 423 HAPIKSLLDAVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 423 ~~~~~~L~eaV~~v-----kPtvLIG~S~~~ 448 (617)
.....++.++++.+ ++|+||=..+..
T Consensus 73 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 103 (271)
T 3ek2_A 73 VADDAQIDALFASLKTHWDSLDGLVHSIGFA 103 (271)
T ss_dssp TTCHHHHHHHHHHHHHHCSCEEEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 11122455556555 789999777654
No 263
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=63.31 E-value=6.8 Score=40.56 Aligned_cols=36 Identities=28% Similarity=0.404 Sum_probs=28.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 404 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi 404 (617)
.-||||+|||.||+..|..|. ..| .+|.++|+.--+
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~-----~~~-------~~itlie~~~~~ 44 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAAL-----GKC-------DDITMINSEKYL 44 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHT-----TTC-------SCEEEECSSSSC
T ss_pred CCCEEEEcCcHHHHHHHHHHh-----CCC-------CEEEEEECCCCC
Confidence 458999999999999999881 123 479999887543
No 264
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=63.23 E-value=6.5 Score=37.99 Aligned_cols=34 Identities=18% Similarity=0.193 Sum_probs=27.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
..+|||+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 40 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM-----RQA-------SVKIIESLP 40 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEcCC
Confidence 3589999999999999988764 253 688999863
No 265
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=63.13 E-value=6.1 Score=38.95 Aligned_cols=31 Identities=23% Similarity=0.402 Sum_probs=24.3
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 359 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 359 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
-|+|+|||.||+-.|..|.+ .|+ ++.++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~-----~G~-------~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 38999999999999988865 375 46777764
No 266
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=66.94 E-value=1.5 Score=41.75 Aligned_cols=92 Identities=13% Similarity=0.108 Sum_probs=53.4
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHh
Q 007112 355 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVK 434 (617)
Q Consensus 355 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~ 434 (617)
+.+.||.|+|+|..|..+|..+... | .+++++|++-- . +.+. ...-...++.|+++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~-----G-------~~V~~~~r~~~----~-~~~~-------~~g~~~~~~~~~~~ 72 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQC-----G-------YSVVFGSRNPQ----V-SSLL-------PRGAEVLCYSEAAS 72 (201)
Confidence 4567899999999999999888643 4 24677776421 1 1111 11111125666666
Q ss_pred ccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007112 435 AIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPT 475 (617)
Q Consensus 435 ~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt 475 (617)
. .|++| ++..+. -++++++ ++...+..+|.-++|..
T Consensus 73 ~--aDvVi-lav~~~-~~~~v~~-l~~~~~~~ivI~~~~G~ 108 (201)
T 2yjz_A 73 R--SDVIV-LAVHRE-HYDFLAE-LADSLKGRVLIDVSNNQ 108 (201)
Confidence 4 67666 333332 3556652 33333456888889876
No 267
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=62.35 E-value=7.1 Score=40.78 Aligned_cols=42 Identities=21% Similarity=0.323 Sum_probs=31.3
Q ss_pred HhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCc
Q 007112 350 LVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 403 (617)
Q Consensus 350 ~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GL 403 (617)
+.+..-+..+|+|+|||.||+..|..|.+ .| .++.++++..-
T Consensus 4 ~~~~~~~~~~v~IIGaG~aGl~aA~~L~~-----~g-------~~v~v~E~~~~ 45 (489)
T 2jae_A 4 LIGKVKGSHSVVVLGGGPAGLCSAFELQK-----AG-------YKVTVLEARTR 45 (489)
T ss_dssp CCCCCCSCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSSS
T ss_pred hhhcccCCCCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEeccCC
Confidence 34444556799999999999999988864 25 36778877644
No 268
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=62.30 E-value=8.7 Score=37.33 Aligned_cols=78 Identities=12% Similarity=0.126 Sum_probs=44.2
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhh-------cccCC
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA-------HEHAP 425 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA-------~~~~~ 425 (617)
.+|+++++||.||++ ||...++..+.+ .| -+++++|++ .. .+......+. -|..+
T Consensus 7 ~~l~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~----~~---~~~~~~~~~~~~~~~~~~Dv~~ 68 (271)
T 3tzq_B 7 AELENKVAIITGACG---GIGLETSRVLAR-AG-------ARVVLADLP----ET---DLAGAAASVGRGAVHHVVDLTN 68 (271)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEECT----TS---CHHHHHHHHCTTCEEEECCTTC
T ss_pred cCCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEcCC----HH---HHHHHHHHhCCCeEEEECCCCC
Confidence 367889999999854 444455555544 36 368888875 11 2222222111 01112
Q ss_pred CCCHHHHHhcc-----CCcEEEeecCCC
Q 007112 426 IKSLLDAVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 426 ~~~L~eaV~~v-----kPtvLIG~S~~~ 448 (617)
..++.++++.+ +.|+||=..+..
T Consensus 69 ~~~v~~~~~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 69 EVSVRALIDFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455666654 799999877754
No 269
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=62.18 E-value=8.8 Score=39.24 Aligned_cols=36 Identities=14% Similarity=0.158 Sum_probs=27.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
.+|||+|||.||+..|..|.+... .| .++.++|++-
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~--~g-------~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG--SK-------ADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG--GG-------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC--CC-------CeEEEEeCCC
Confidence 479999999999999999876221 13 4677887664
No 270
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=61.97 E-value=31 Score=37.63 Aligned_cols=120 Identities=22% Similarity=0.166 Sum_probs=77.0
Q ss_pred CCCceeecCc---cchhHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcChHHHHHHHHHHHHHHh
Q 007112 324 SSHLVFNDDI---QGTASVVLAGILSALKL------------------VGGTLADQTFLFLGAGEAGTGIAELIALEMSK 382 (617)
Q Consensus 324 ~~~~~FNDDi---QGTaaV~LAgll~Alr~------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~ 382 (617)
..+.+.|--- ..+|=-++|-+|+..|- .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 88 ~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~---- 163 (529)
T 1ygy_A 88 RGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAA---- 163 (529)
T ss_dssp TTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHT----
T ss_pred CCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHHh----
Confidence 3455555432 23455578888887663 2567899999999999999999998853
Q ss_pred ccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccCCcEEEeec----CCCCCCCHHHHHH
Q 007112 383 QTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIKPTMLMGTS----GVGKTFTKEVVEA 458 (617)
Q Consensus 383 ~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vkPtvLIG~S----~~~g~Fteevv~~ 458 (617)
.|+ +++.+|+.- .+ + .. ....-...+|.|+++. .|+++=.. ...++++++.+..
T Consensus 164 -~G~-------~V~~~d~~~----~~-~---~a----~~~g~~~~~l~e~~~~--aDvV~l~~P~~~~t~~~i~~~~~~~ 221 (529)
T 1ygy_A 164 -FGA-------YVVAYDPYV----SP-A---RA----AQLGIELLSLDDLLAR--ADFISVHLPKTPETAGLIDKEALAK 221 (529)
T ss_dssp -TTC-------EEEEECTTS----CH-H---HH----HHHTCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred -CCC-------EEEEECCCC----Ch-h---HH----HhcCcEEcCHHHHHhc--CCEEEECCCCchHHHHHhCHHHHhC
Confidence 253 688888742 11 1 00 0101111379999986 88887443 2345777777766
Q ss_pred HHcCCCCcEEEecC
Q 007112 459 MASFNEKPVIFALS 472 (617)
Q Consensus 459 Ma~~~erPIIFaLS 472 (617)
|. +..+|.=.|
T Consensus 222 ~k---~g~ilin~a 232 (529)
T 1ygy_A 222 TK---PGVIIVNAA 232 (529)
T ss_dssp SC---TTEEEEECS
T ss_pred CC---CCCEEEECC
Confidence 63 566887777
No 271
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=61.76 E-value=10 Score=35.71 Aligned_cols=101 Identities=18% Similarity=0.169 Sum_probs=55.7
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-ccCCCCCHHHH
Q 007112 355 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDA 432 (617)
Q Consensus 355 l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~ea 432 (617)
..-.+|+|.|| |-.|..|++.|++ .|- -++.+++++. ++...+......+.. |..+..++.++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~-----~G~------~~V~~~~R~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 85 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLAD-----KQT------IKQTLFARQP----AKIHKPYPTNSQIIMGDVLNHAALKQA 85 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTT-----CTT------EEEEEEESSG----GGSCSSCCTTEEEEECCTTCHHHHHHH
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHh-----CCC------ceEEEEEcCh----hhhcccccCCcEEEEecCCCHHHHHHH
Confidence 34468999995 6677666666643 241 3677777652 111111111111111 22223467788
Q ss_pred HhccCCcEEEeecCCCCC--CCHHHHHHHHcCCCCcEEEecC
Q 007112 433 VKAIKPTMLMGTSGVGKT--FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 433 V~~vkPtvLIG~S~~~g~--Fteevv~~Ma~~~erPIIFaLS 472 (617)
++. .|++|=+.+.... -++.++++|.+..-+-|||.=|
T Consensus 86 ~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 86 MQG--QDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp HTT--CSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hcC--CCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 875 7999976654432 2567888887665555666544
No 272
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=61.71 E-value=10 Score=38.11 Aligned_cols=106 Identities=19% Similarity=0.225 Sum_probs=55.8
Q ss_pred cchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCc
Q 007112 334 QGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ 413 (617)
Q Consensus 334 QGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~ 413 (617)
++.....++..+.+++-.... .+++++|.|||..|...+.+... .|. ++++.+|+. ..| ++
T Consensus 143 ~aa~~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~----~~~---~~ 203 (343)
T 2dq4_A 143 VAAILEPFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDPN----PYR---LA 203 (343)
T ss_dssp HHTTHHHHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC----HHH---HG
T ss_pred HHHhhhHHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----HHH---HH
Confidence 343333444445666622333 88999999998777766654432 363 468888763 122 11
Q ss_pred hhchhhhcc--cCCCCCHHHHHhcc---CCcEEEeecCCCCCCCHHHHHHHH
Q 007112 414 HFKKPWAHE--HAPIKSLLDAVKAI---KPTMLMGTSGVGKTFTKEVVEAMA 460 (617)
Q Consensus 414 ~~k~~fA~~--~~~~~~L~eaV~~v---kPtvLIG~S~~~g~Fteevv~~Ma 460 (617)
..++- |.. .....++.+.++.. +.|++|=+++.+ ...++.++.|+
T Consensus 204 ~~~~l-a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~~l~ 253 (343)
T 2dq4_A 204 FARPY-ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNE-AAIHQGLMALI 253 (343)
T ss_dssp GGTTT-CSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCH-HHHHHHHHHEE
T ss_pred HHHHh-HHhccCcCccCHHHHHHHhcCCCCCEEEECCCCH-HHHHHHHHHHh
Confidence 11111 221 11123566666532 578888776632 12344445443
No 273
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=61.64 E-value=20 Score=33.63 Aligned_cols=38 Identities=21% Similarity=0.275 Sum_probs=25.4
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
..|+++++||.||++ ||...|+..+.+ .| -+++++|++
T Consensus 10 ~~l~~k~vlITGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 47 (247)
T 3i1j_A 10 ELLKGRVILVTGAAR---GIGAAAARAYAA-HG-------ASVVLLGRT 47 (247)
T ss_dssp TTTTTCEEEESSTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred ccCCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEecC
Confidence 357889999999853 444455555554 36 358888875
No 274
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=61.52 E-value=6.9 Score=40.28 Aligned_cols=38 Identities=13% Similarity=0.246 Sum_probs=29.8
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCc
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 403 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GL 403 (617)
...+|||+|||.||+..|..|.+. |.+ .+|.++|+..-
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~-----g~~-----~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQN-----GFE-----GRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-----TCC-----SCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHHcc-----CcC-----CCEEEEecCCC
Confidence 357899999999999999998653 542 36899988643
No 275
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=61.52 E-value=16 Score=35.66 Aligned_cols=96 Identities=18% Similarity=0.162 Sum_probs=53.8
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhcc
Q 007112 359 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKAI 436 (617)
Q Consensus 359 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~v 436 (617)
||+|.|| |-.|..+++.|++ .| .+++.+|++. +..+.+...+..+.. +..+..++.++++.
T Consensus 15 ~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~- 77 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIRA-----AG-------HDLVLIHRPS----SQIQRLAYLEPECRVAEMLDHAGLERALRG- 77 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEECTT----SCGGGGGGGCCEEEECCTTCHHHHHHHTTT-
T ss_pred EEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEecCh----HhhhhhccCCeEEEEecCCCHHHHHHHHcC-
Confidence 8999996 8888888877764 25 3688888752 111112211111211 11222357777774
Q ss_pred CCcEEEeecCCCCCC--------------CHHHHHHHHcCCCCcEEEecC
Q 007112 437 KPTMLMGTSGVGKTF--------------TKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 437 kPtvLIG~S~~~g~F--------------teevv~~Ma~~~erPIIFaLS 472 (617)
+|++|=+.+..+.. |..+++++.+..-+.+||.=|
T Consensus 78 -~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 126 (342)
T 2x4g_A 78 -LDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp -CSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred -CCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 99999887754311 346777777665567887544
No 276
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=61.51 E-value=6 Score=37.92 Aligned_cols=77 Identities=14% Similarity=0.179 Sum_probs=42.0
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhh------h-cccCCC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPW------A-HEHAPI 426 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~f------A-~~~~~~ 426 (617)
+|+++++||.||++ ||...++..+.+ .| -+++++|++- +.+......+ . -|..+.
T Consensus 3 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~~~ 64 (253)
T 1hxh_A 3 RLQGKVALVTGGAS---GVGLEVVKLLLG-EG-------AKVAFSDINE-------AAGQQLAAELGERSMFVRHDVSSE 64 (253)
T ss_dssp TTTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEECSCH-------HHHHHHHHHHCTTEEEECCCTTCH
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHcCCceEEEEccCCCH
Confidence 57788999999753 444555555554 36 3588887641 1122211111 0 011112
Q ss_pred CCHHHHHhcc-----CCcEEEeecCCC
Q 007112 427 KSLLDAVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 427 ~~L~eaV~~v-----kPtvLIG~S~~~ 448 (617)
.++.++++.+ ++|+||=..+..
T Consensus 65 ~~v~~~~~~~~~~~g~id~lv~~Ag~~ 91 (253)
T 1hxh_A 65 ADWTLVMAAVQRRLGTLNVLVNNAGIL 91 (253)
T ss_dssp HHHHHHHHHHHHHHCSCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3455556554 689999777654
No 277
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=61.40 E-value=25 Score=37.81 Aligned_cols=45 Identities=24% Similarity=0.222 Sum_probs=29.5
Q ss_pred CcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCH
Q 007112 438 PTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTA 482 (617)
Q Consensus 438 PtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~ 482 (617)
.+++|-.||++--.|+++.+.+.+....-=++-+|||...-|-++
T Consensus 122 g~iVV~~STv~pgtt~~l~~~l~e~~~~~d~~v~~~Pe~a~eG~a 166 (446)
T 4a7p_A 122 PSVIVTKSTVPVGTGDEVERIIAEVAPNSGAKVVSNPEFLREGAA 166 (446)
T ss_dssp CCEEEECSCCCTTHHHHHHHHHHHHSTTSCCEEEECCCCCCTTSH
T ss_pred CCEEEEeCCCCchHHHHHHHHHHHhCCCCCceEEeCcccccccch
Confidence 467778888876678887776654321111456788887777765
No 278
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=61.32 E-value=14 Score=35.91 Aligned_cols=98 Identities=16% Similarity=0.280 Sum_probs=55.3
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhcc
Q 007112 359 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKAI 436 (617)
Q Consensus 359 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~v 436 (617)
||+|.|| |-.|..+++.|++ .| .+++.+|+.- ......+.. ...+.. +..+..++.++++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~ 65 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLA-----RG-------LEVAVLDNLA---TGKRENVPK-GVPFFRVDLRDKEGVERAFREF 65 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEECCCS---SCCGGGSCT-TCCEECCCTTCHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHH-----CC-------CEEEEEECCC---cCchhhccc-CeEEEECCCCCHHHHHHHHHhc
Confidence 6899997 6666667666643 25 3578887631 111111211 111111 111223577788766
Q ss_pred CCcEEEeecCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007112 437 KPTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 437 kPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 472 (617)
++|++|=+.+..+. -|..+++++.+..-+.|||.=|
T Consensus 66 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 117 (311)
T 2p5y_A 66 RPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFAST 117 (311)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 89999988876431 0345677776665567888644
No 279
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=61.18 E-value=2.8 Score=45.20 Aligned_cols=75 Identities=17% Similarity=0.152 Sum_probs=43.6
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcc-cCCCCCHHH
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-HAPIKSLLD 431 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~e 431 (617)
..|.+.|++|+|-+.-..|+++.+.+ .|+.. +.+.-.. ..+.+... +...- ..+...|++
T Consensus 309 ~~l~Gkrv~i~~~~~~~~~l~~~L~e-----lGm~v------v~~~~~~------~~~~~~~~--~~~~v~~~D~~~le~ 369 (458)
T 3pdi_B 309 FMLSSARTAIAADPDLLLGFDALLRS-----MGAHT------VAAVVPA------RAAALVDS--PLPSVRVGDLEDLEH 369 (458)
T ss_dssp HHHTTCEEEEECCHHHHHHHHHHHHT-----TTCEE------EEEEESS------CCSCCTTT--TSSCEEESHHHHHHH
T ss_pred HhcCCCEEEEECCcHHHHHHHHHHHH-----CCCEE------EEEEECC------CChhhhhC--ccCcEEeCCHHHHHH
Confidence 45778999999999999999998842 48632 2222111 10111110 00000 011224778
Q ss_pred HHhccCCcEEEeecC
Q 007112 432 AVKAIKPTMLMGTSG 446 (617)
Q Consensus 432 aV~~vkPtvLIG~S~ 446 (617)
.++..+||.+||-|-
T Consensus 370 ~i~~~~pDllig~~~ 384 (458)
T 3pdi_B 370 AARAGQAQLVIGNSH 384 (458)
T ss_dssp HHHHHTCSEEEECTT
T ss_pred HHHhcCCCEEEEChh
Confidence 899999999999554
No 280
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=61.16 E-value=8.2 Score=34.55 Aligned_cols=32 Identities=22% Similarity=0.375 Sum_probs=26.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
-+++|+|+|.+|+-.|..+.+. | .++.++|+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-----g-------~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-----G-------LKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCC
Confidence 3799999999999999888652 5 468889876
No 281
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=61.11 E-value=22 Score=32.50 Aligned_cols=50 Identities=14% Similarity=0.196 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeC-cChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 340 VLAGILSALKLVGGTLADQTFLFLG-AGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 340 ~LAgll~Alr~~g~~l~d~riv~~G-AGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.++..+.+++....--.++++++.| +|..|..+++++... | -+++.+|++
T Consensus 22 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-----G-------~~V~~~~~~ 72 (198)
T 1pqw_A 22 AYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMI-----G-------ARIYTTAGS 72 (198)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHH-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHc-----C-------CEEEEEeCC
Confidence 3444445554334444678999999 487787777766432 5 257877764
No 282
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=61.06 E-value=6.5 Score=38.47 Aligned_cols=33 Identities=18% Similarity=0.307 Sum_probs=27.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
..+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGR-----AQ-------LSTLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----cC-------CcEEEEeCC
Confidence 4689999999999999988764 25 368999987
No 283
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=60.75 E-value=6.1 Score=37.18 Aligned_cols=95 Identities=14% Similarity=0.115 Sum_probs=51.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchh-chhhhc-ccCCCCCHHHH-Hhc
Q 007112 359 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHF-KKPWAH-EHAPIKSLLDA-VKA 435 (617)
Q Consensus 359 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~-k~~fA~-~~~~~~~L~ea-V~~ 435 (617)
||+|+|+|..|..+|+.|... | .++.++|++ .++-+.+... ...+-. +......|.++ ++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-----g-------~~v~vid~~----~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~- 64 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-----K-------YGVVIINKD----RELCEEFAKKLKATIIHGDGSHKEILRDAEVS- 64 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-----T-------CCEEEEESC----HHHHHHHHHHSSSEEEESCTTSHHHHHHHTCC-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC----HHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcc-
Confidence 699999999999999988652 5 468889874 1111111110 001111 11111235554 43
Q ss_pred cCCcEEEeecCCCCCCCHHHHHHHHc-CCCCcEEEecCC
Q 007112 436 IKPTMLMGTSGVGKTFTKEVVEAMAS-FNEKPVIFALSN 473 (617)
Q Consensus 436 vkPtvLIG~S~~~g~Fteevv~~Ma~-~~erPIIFaLSN 473 (617)
+++++|-+.... ..-..+..+++ .+..+-|++..|
T Consensus 65 -~ad~vi~~~~~d--~~n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 65 -KNDVVVILTPRD--EVNLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp -TTCEEEECCSCH--HHHHHHHHHHHHTSCCCEEEECCC
T ss_pred -cCCEEEEecCCc--HHHHHHHHHHHHHcCCCeEEEEEe
Confidence 589998665533 22233444443 456666666655
No 284
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=60.54 E-value=8.1 Score=37.84 Aligned_cols=33 Identities=24% Similarity=0.433 Sum_probs=27.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+..|+|+|||.+|+.+|-.+.+ .|. ++.++|+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~-----~G~-------~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAA-----GGH-------EVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 4589999999999999988865 363 68899987
No 285
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=60.43 E-value=9.9 Score=38.35 Aligned_cols=49 Identities=14% Similarity=0.115 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 340 VLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 340 ~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.++..+.|++..+. .+++++|.|||..|..++.++.. .|. ++++.+|+.
T Consensus 153 ~~~ta~~~l~~~~~--~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~ 201 (348)
T 2d8a_A 153 PLGNAVDTVLAGPI--SGKSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEPS 201 (348)
T ss_dssp HHHHHHHHHTTSCC--TTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC
T ss_pred HHHHHHHHHHhcCC--CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC
Confidence 44444556644333 88999999999877777665532 363 468877753
No 286
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=60.41 E-value=27 Score=35.24 Aligned_cols=99 Identities=15% Similarity=0.127 Sum_probs=57.5
Q ss_pred CCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-ccCCCCCHHHHH
Q 007112 356 ADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAV 433 (617)
Q Consensus 356 ~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV 433 (617)
+..+|+|.|| |-.|..+++.|++ .| .+++.+|++- .....+......+.. +..+..++.+++
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~ 91 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKH-----EG-------HYVIASDWKK----NEHMTEDMFCDEFHLVDLRVMENCLKVT 91 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----CSSSCGGGTCSEEEECCTTSHHHHHHHH
T ss_pred cCCeEEEECCccHHHHHHHHHHHH-----CC-------CeEEEEECCC----ccchhhccCCceEEECCCCCHHHHHHHh
Confidence 3468999998 7777777777754 25 3688888752 111111111111211 112223577777
Q ss_pred hccCCcEEEeecCCCCC--C---------------CHHHHHHHHcCCCCcEEEecC
Q 007112 434 KAIKPTMLMGTSGVGKT--F---------------TKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 434 ~~vkPtvLIG~S~~~g~--F---------------teevv~~Ma~~~erPIIFaLS 472 (617)
+ ++|++|=+.+.... + |..+++++.+..-+.|||.=|
T Consensus 92 ~--~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 92 E--GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp T--TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred C--CCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 6 59999988875432 1 345677776665567887544
No 287
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=60.28 E-value=6 Score=38.34 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=26.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
..+|||+|||.||+..|..|.+. |+ ++.++|+.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~vie~~ 54 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARA-----EI-------KPILYEGM 54 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEecC
Confidence 46899999999999999888653 53 58889884
No 288
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=60.26 E-value=9.3 Score=36.66 Aligned_cols=37 Identities=19% Similarity=0.307 Sum_probs=24.0
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+|+++++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 2 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 38 (254)
T 1hdc_A 2 DLSGKTVIITGGAR---GLGAEAARQAVA-AG-------ARVVLADVL 38 (254)
T ss_dssp CCCCSEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 47788999999843 444445555544 36 358888774
No 289
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=60.25 E-value=12 Score=35.02 Aligned_cols=69 Identities=14% Similarity=0.209 Sum_probs=39.1
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhcc-
Q 007112 359 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI- 436 (617)
Q Consensus 359 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v- 436 (617)
++||.|| |-.|..+++.+++ .| .+++++|++. + .+.. .+.-+.....++.++++.+
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~---~~~~---~~~~D~~~~~~~~~~~~~~~ 60 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLAR-----AG-------HTVIGIDRGQ----A---DIEA---DLSTPGGRETAVAAVLDRCG 60 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSS----S---SEEC---CTTSHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCh----h---Hccc---cccCCcccHHHHHHHHHHcC
Confidence 6899997 5555555555543 25 3688888751 1 1211 1111111123466667655
Q ss_pred -CCcEEEeecCCCC
Q 007112 437 -KPTMLMGTSGVGK 449 (617)
Q Consensus 437 -kPtvLIG~S~~~g 449 (617)
++|++|=+.+...
T Consensus 61 ~~~d~vi~~Ag~~~ 74 (255)
T 2dkn_A 61 GVLDGLVCCAGVGV 74 (255)
T ss_dssp TCCSEEEECCCCCT
T ss_pred CCccEEEECCCCCC
Confidence 7999998877653
No 290
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=60.19 E-value=8.8 Score=41.36 Aligned_cols=44 Identities=23% Similarity=0.267 Sum_probs=32.7
Q ss_pred CcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhc
Q 007112 438 PTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYT 487 (617)
Q Consensus 438 PtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~ 487 (617)
.+++|=.|+++--.|+++.+... ++-++| ||...-|-.+..-..
T Consensus 146 g~iVV~~STv~pgtt~~l~~~l~---~~~v~~---sPe~~~~G~A~~~~l 189 (432)
T 3pid_A 146 NAVMIIKSTIPVGFTRDIKERLG---IDNVIF---SPEFLREGRALYDNL 189 (432)
T ss_dssp TSEEEECSCCCTTHHHHHHHHHT---CCCEEE---CCCCCCTTSHHHHHH
T ss_pred CcEEEEeCCCChHHHHHHHHHHh---hccEee---cCccCCcchhhhccc
Confidence 35777788888778888887775 445655 999988888876544
No 291
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=60.00 E-value=9.8 Score=36.77 Aligned_cols=99 Identities=14% Similarity=0.176 Sum_probs=58.4
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhc
Q 007112 358 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKA 435 (617)
Q Consensus 358 ~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~ 435 (617)
.+|+|.|| |-.|..+++.|++.- .| .+++.+|++. .... +.+ +..+.. +..+..++.++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~---~g-------~~V~~~~r~~----~~~~-~~~-~~~~~~~D~~d~~~~~~~~~~ 66 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLY---GT-------ENVIASDIRK----LNTD-VVN-SGPFEVVNALDFNQIEHLVEV 66 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHH---CG-------GGEEEEESCC----CSCH-HHH-SSCEEECCTTCHHHHHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHhC---CC-------CEEEEEcCCC----cccc-ccC-CCceEEecCCCHHHHHHHHhh
Confidence 57999998 888888888776420 12 3588887641 1100 111 111111 11222457788887
Q ss_pred cCCcEEEeecCCCCC---------------CCHHHHHHHHcCCCCcEEEecC
Q 007112 436 IKPTMLMGTSGVGKT---------------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 436 vkPtvLIG~S~~~g~---------------Fteevv~~Ma~~~erPIIFaLS 472 (617)
.++|++|=+.+.... -|..+++++.+..-+.+||.=|
T Consensus 67 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 118 (312)
T 2yy7_A 67 HKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSS 118 (312)
T ss_dssp TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEE
T ss_pred cCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 789999988875421 1346777777665567887533
No 292
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=59.99 E-value=8.6 Score=41.23 Aligned_cols=32 Identities=19% Similarity=0.187 Sum_probs=26.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.||.|+|+|..|..+|..++.. | .+++++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-----G-------~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-----G-------ANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhc-----C-------CEEEEEECC
Confidence 4899999999999999988753 5 367788865
No 293
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=59.84 E-value=8.1 Score=38.50 Aligned_cols=35 Identities=26% Similarity=0.351 Sum_probs=28.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 403 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GL 403 (617)
+..|||+|||.+|+.+|-.|.+ .| .++.++|+..+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~-----~G-------~~V~llE~~~~ 51 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAK-----EN-------KNTALFESGTM 51 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----CC-------CcEEEEeCCCC
Confidence 4689999999999999998875 26 36899998744
No 294
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=59.83 E-value=9.7 Score=37.12 Aligned_cols=82 Identities=18% Similarity=0.240 Sum_probs=41.6
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-ccCCCCCHH
Q 007112 352 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLL 430 (617)
Q Consensus 352 g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~ 430 (617)
+.++.++++||.||++ ||...++..+.+ .|. +++++|++ .++.+.+...+..+.. |-.+..++.
T Consensus 11 ~~~~~~k~vlVTGas~---gIG~aia~~l~~-~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~Dv~d~~~v~ 75 (266)
T 3p19_A 11 GRGSMKKLVVITGASS---GIGEAIARRFSE-EGH-------PLLLLARR----VERLKALNLPNTLCAQVDVTDKYTFD 75 (266)
T ss_dssp ----CCCEEEEESTTS---HHHHHHHHHHHH-TTC-------CEEEEESC----HHHHHTTCCTTEEEEECCTTCHHHHH
T ss_pred CCCCCCCEEEEECCCC---HHHHHHHHHHHH-CCC-------EEEEEECC----HHHHHHhhcCCceEEEecCCCHHHHH
Confidence 3457788999999854 455555555554 363 58888874 1111111111111111 212223455
Q ss_pred HHHhcc-----CCcEEEeecCCC
Q 007112 431 DAVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 431 eaV~~v-----kPtvLIG~S~~~ 448 (617)
++++.+ ++|+||=..+..
T Consensus 76 ~~~~~~~~~~g~iD~lvnnAg~~ 98 (266)
T 3p19_A 76 TAITRAEKIYGPADAIVNNAGMM 98 (266)
T ss_dssp HHHHHHHHHHCSEEEEEECCCCC
T ss_pred HHHHHHHHHCCCCCEEEECCCcC
Confidence 566544 789999777653
No 295
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=59.61 E-value=9.6 Score=33.71 Aligned_cols=34 Identities=6% Similarity=0.114 Sum_probs=27.3
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
...+|+|+|+|..|..+++.|.. .| .++.++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~-----~g-------~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQ-----RG-------QNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEECC
Confidence 45789999999999999998864 24 468888875
No 296
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=59.37 E-value=9.8 Score=38.74 Aligned_cols=35 Identities=9% Similarity=0.122 Sum_probs=27.2
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
...+|+|+|||.||+..|..|.+ .|+ ++.++|+.-
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 38 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD-----AGV-------DVDVYERSP 38 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 45789999999999999988865 364 577777653
No 297
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=59.36 E-value=9 Score=39.52 Aligned_cols=38 Identities=21% Similarity=0.401 Sum_probs=29.0
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc
Q 007112 352 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 400 (617)
Q Consensus 352 g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~ 400 (617)
+..+++..|||+|||.+|+.+|-.|.+. | ..++.++|+
T Consensus 18 ~~~m~~~dVvIIGgGiaGls~A~~La~~-----G------~~~V~vlE~ 55 (448)
T 3axb_A 18 GSHMPRFDYVVVGAGVVGLAAAYYLKVW-----S------GGSVLVVDA 55 (448)
T ss_dssp ---CCEEEEEEECCSHHHHHHHHHHHHH-----H------CSCEEEEES
T ss_pred cccCCcCCEEEECcCHHHHHHHHHHHhC-----C------CCcEEEEcc
Confidence 3445677999999999999999988764 3 146899998
No 298
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=59.35 E-value=11 Score=38.13 Aligned_cols=35 Identities=31% Similarity=0.459 Sum_probs=28.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 403 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GL 403 (617)
+.+|+|+|||.||+..|-.|.+ .|+ ++.++|++-.
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~~ 39 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQKF 39 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSCS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 3589999999999999987754 364 5889998743
No 299
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=59.27 E-value=9 Score=39.18 Aligned_cols=35 Identities=26% Similarity=0.293 Sum_probs=27.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
+.+|+|+|||.||+..|..|.+ .|+ +++.++|+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~-----~G~------~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQ-----AGI------GKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCC
Confidence 4689999999999999988865 364 2377787754
No 300
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=59.26 E-value=4.9 Score=44.32 Aligned_cols=37 Identities=19% Similarity=0.293 Sum_probs=32.5
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.|+..||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 29 ~L~~~~VlvvG~GGlGseiak~La~a-----GV------g~itlvD~D 65 (531)
T 1tt5_A 29 ALESAHVCLINATATGTEILKNLVLP-----GI------GSFTIIDGN 65 (531)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECCC
T ss_pred HHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 46689999999999999999999864 76 799999987
No 301
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=59.25 E-value=6.2 Score=38.26 Aligned_cols=30 Identities=20% Similarity=0.315 Sum_probs=23.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 359 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 359 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
||.|+|+|..|..+|..+.. |. +++++|++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~------g~-------~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR------RF-------PTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT------TS-------CEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHhC------CC-------eEEEEeCC
Confidence 79999999999999988742 42 47778764
No 302
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=59.19 E-value=8.6 Score=38.42 Aligned_cols=34 Identities=18% Similarity=0.342 Sum_probs=28.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
+..|+|+|||.+|+.+|-.|.+ .|. ++.++|+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~-----~G~-------~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAK-----RGE-------EVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 4689999999999999998865 263 599999874
No 303
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=59.09 E-value=8.3 Score=39.27 Aligned_cols=36 Identities=19% Similarity=0.428 Sum_probs=28.7
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 355 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 355 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
..+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ-----NGI-------DVSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 345799999999999999988754 364 688999864
No 304
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=58.96 E-value=8.1 Score=37.64 Aligned_cols=33 Identities=27% Similarity=0.359 Sum_probs=27.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAAR-----SGF-------SVAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCC
Confidence 4689999999999999988864 253 58899985
No 305
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=58.86 E-value=17 Score=34.79 Aligned_cols=79 Identities=14% Similarity=0.246 Sum_probs=42.2
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCch-hchhhhc-ccCCCCCHHH
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH-FKKPWAH-EHAPIKSLLD 431 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~-~k~~fA~-~~~~~~~L~e 431 (617)
+|+++++||.||++ ||...++..+.+ .| -+++++|++- ++ +.+.. ....+.. |..+..++.+
T Consensus 3 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~~-~~~~~~~~~~~~~~D~~~~~~~~~ 66 (256)
T 2d1y_A 3 LFAGKGVLVTGGAR---GIGRAIAQAFAR-EG-------ALVALCDLRP----EG-KEVAEAIGGAFFQVDLEDERERVR 66 (256)
T ss_dssp TTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESST----TH-HHHHHHHTCEEEECCTTCHHHHHH
T ss_pred CCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----hH-HHHHHHhhCCEEEeeCCCHHHHHH
Confidence 46778999999753 444555555554 36 3688888752 11 11110 0001111 2122234556
Q ss_pred HHhcc-----CCcEEEeecCCC
Q 007112 432 AVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 432 aV~~v-----kPtvLIG~S~~~ 448 (617)
+++.+ ++|+||=..+..
T Consensus 67 ~~~~~~~~~g~iD~lv~~Ag~~ 88 (256)
T 2d1y_A 67 FVEEAAYALGRVDVLVNNAAIA 88 (256)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 66554 799999777654
No 306
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=58.65 E-value=40 Score=32.49 Aligned_cols=76 Identities=17% Similarity=0.274 Sum_probs=41.8
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHH
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAV 433 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 433 (617)
+|++.++||.||++ ||...++..+.+ .| -+++++|++. .+...... +.-|..+..++.+++
T Consensus 5 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~~~~~~~~----~~~Dl~~~~~v~~~~ 65 (264)
T 2dtx_A 5 DLRDKVVIVTGASM---GIGRAIAERFVD-EG-------SKVIDLSIHD----PGEAKYDH----IECDVTNPDQVKASI 65 (264)
T ss_dssp GGTTCEEEEESCSS---HHHHHHHHHHHH-TT-------CEEEEEESSC----CCSCSSEE----EECCTTCHHHHHHHH
T ss_pred ccCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEecCc----ccCCceEE----EEecCCCHHHHHHHH
Confidence 36778999999754 455555555554 36 3688888752 11111111 111111223455555
Q ss_pred hcc-----CCcEEEeecCCC
Q 007112 434 KAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 434 ~~v-----kPtvLIG~S~~~ 448 (617)
+.+ ++|+||=..+..
T Consensus 66 ~~~~~~~g~iD~lv~~Ag~~ 85 (264)
T 2dtx_A 66 DHIFKEYGSISVLVNNAGIE 85 (264)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHcCCCCEEEECCCCC
Confidence 544 699999877654
No 307
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=58.55 E-value=7.3 Score=36.67 Aligned_cols=37 Identities=19% Similarity=0.278 Sum_probs=25.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
++++.++||.||.. ||...++..+.+ .| -+++++|++
T Consensus 3 ~~~~k~vlVtGasg---giG~~~a~~l~~-~G-------~~V~~~~r~ 39 (251)
T 1zk4_A 3 RLDGKVAIITGGTL---GIGLAIATKFVE-EG-------AKVMITGRH 39 (251)
T ss_dssp TTTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCcEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 57788999999754 455556666555 36 358888874
No 308
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=58.47 E-value=12 Score=36.84 Aligned_cols=97 Identities=14% Similarity=0.104 Sum_probs=58.8
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhh----------hc-ccC
Q 007112 357 DQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPW----------AH-EHA 424 (617)
Q Consensus 357 d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~f----------A~-~~~ 424 (617)
..+|+|.|| |-.|..+++.|++ .| -+++++|+.. .. .......+ .. +..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~~---~~~~~~~~~~~~~~~~~~~~~Dl~ 65 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLA-----HG-------YDVVIADNLV----NS---KREAIARIEKITGKTPAFHETDVS 65 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCS----SS---CTHHHHHHHHHHSCCCEEECCCTT
T ss_pred CcEEEEecCCcHHHHHHHHHHHH-----CC-------CcEEEEecCC----cc---hHHHHHHHHhhcCCCceEEEeecC
Confidence 468999996 6666666666654 25 3688887641 11 11111111 01 111
Q ss_pred CCCCHHHHHhccCCcEEEeecCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007112 425 PIKSLLDAVKAIKPTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 425 ~~~~L~eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 472 (617)
+..++.++++..++|++|=+.+.... -|..++++|.+..-+.|||.=|
T Consensus 66 d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 66 DERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp CHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 22357788887789999988775421 1446788888777678988654
No 309
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=58.44 E-value=9.7 Score=36.41 Aligned_cols=37 Identities=32% Similarity=0.299 Sum_probs=23.5
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+|+++++||.||+. ||...++..+.+ .|. +++++|++
T Consensus 1 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G~-------~V~~~~r~ 37 (255)
T 2q2v_A 1 TLKGKTALVTGSTS---GIGLGIAQVLAR-AGA-------NIVLNGFG 37 (255)
T ss_dssp CCTTCEEEESSCSS---HHHHHHHHHHHH-TTC-------EEEEECSS
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 36778999999853 344445555544 363 58888765
No 310
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=58.40 E-value=8.6 Score=38.34 Aligned_cols=35 Identities=26% Similarity=0.254 Sum_probs=28.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcc
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 404 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi 404 (617)
..|+|+|||.+|+.+|-.|.+ .| .++.++|+....
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~-----~G-------~~V~vie~~~~~ 38 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAK-----QG-------VKTLLVDAFDPP 38 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCCCCC
Confidence 579999999999999998865 26 368999987543
No 311
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=58.38 E-value=33 Score=32.71 Aligned_cols=77 Identities=16% Similarity=0.128 Sum_probs=43.3
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHH
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDA 432 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ea 432 (617)
.+++++++||.||++ ||...++..+.+ .| -+++++|++- ...+.+. +..+.-|- ..++.++
T Consensus 15 ~~~~~k~vlVTGas~---gIG~~~a~~l~~-~G-------~~V~~~~r~~----~~~~~~~--~~~~~~D~--~~~~~~~ 75 (249)
T 1o5i_A 15 LGIRDKGVLVLAASR---GIGRAVADVLSQ-EG-------AEVTICARNE----ELLKRSG--HRYVVCDL--RKDLDLL 75 (249)
T ss_dssp -CCTTCEEEEESCSS---HHHHHHHHHHHH-TT-------CEEEEEESCH----HHHHHTC--SEEEECCT--TTCHHHH
T ss_pred hccCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEcCCH----HHHHhhC--CeEEEeeH--HHHHHHH
Confidence 468889999999854 444445555544 36 3588888753 0001111 00110111 2456677
Q ss_pred Hhcc-CCcEEEeecCCC
Q 007112 433 VKAI-KPTMLMGTSGVG 448 (617)
Q Consensus 433 V~~v-kPtvLIG~S~~~ 448 (617)
++.+ ++|+||=..+..
T Consensus 76 ~~~~~~iD~lv~~Ag~~ 92 (249)
T 1o5i_A 76 FEKVKEVDILVLNAGGP 92 (249)
T ss_dssp HHHSCCCSEEEECCCCC
T ss_pred HHHhcCCCEEEECCCCC
Confidence 7666 799999877754
No 312
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=58.30 E-value=9.2 Score=39.49 Aligned_cols=37 Identities=16% Similarity=0.253 Sum_probs=29.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcc
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 404 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi 404 (617)
.+|||+|||.||+..|..|.+ .|. ..+|.++|+..-.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~-----~g~-----~~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRA-----EGF-----EGRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHc-----cCc-----CCeEEEEECCCCC
Confidence 489999999999999998865 354 2469999886543
No 313
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=58.22 E-value=14 Score=37.37 Aligned_cols=103 Identities=16% Similarity=0.209 Sum_probs=58.0
Q ss_pred CCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCc-hhchhhhc-ccCCCCCHH
Q 007112 354 TLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQ-HFKKPWAH-EHAPIKSLL 430 (617)
Q Consensus 354 ~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~-~~k~~fA~-~~~~~~~L~ 430 (617)
+++..+|+|.|| |-.|..+++.|++ .|. .+++.+|+.. ....+.+. ..+..+.. +..+..++.
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~-----~g~------~~V~~~~r~~---~~~~~~l~~~~~v~~~~~Dl~d~~~l~ 94 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLE-----LGV------NQVHVVDNLL---SAEKINVPDHPAVRFSETSITDDALLA 94 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHH-----TTC------SEEEEECCCT---TCCGGGSCCCTTEEEECSCTTCHHHHH
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHH-----cCC------ceEEEEECCC---CCchhhccCCCceEEEECCCCCHHHHH
Confidence 356679999997 7778777777754 251 4688888752 11001121 00111111 111112455
Q ss_pred HHHhccCCcEEEeecCCCCC----------------CCHHHHHHHHcC-CCCcEEEecC
Q 007112 431 DAVKAIKPTMLMGTSGVGKT----------------FTKEVVEAMASF-NEKPVIFALS 472 (617)
Q Consensus 431 eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~-~erPIIFaLS 472 (617)
++++ ++|++|=+.+.... -|..+++++.+. .-+.+||.=|
T Consensus 95 ~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 95 SLQD--EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp HCCS--CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred HHhh--CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 5665 69999988876431 145677777665 4567887544
No 314
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=58.06 E-value=19 Score=35.89 Aligned_cols=108 Identities=26% Similarity=0.267 Sum_probs=57.5
Q ss_pred CCCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcc---cCCcccCCchh------chhhhc-
Q 007112 353 GTLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI---VSSRKESLQHF------KKPWAH- 421 (617)
Q Consensus 353 ~~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi---~~~R~~~L~~~------k~~fA~- 421 (617)
.+++..+|+|.|| |-.|..+++.|++. ..| -+++.+|+..-- ...+.+.+... +..+..
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~---~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQEN---HPK-------AKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAA 75 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHH---CTT-------SEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEEC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhh---CCC-------CeEEEEECCCccccccccchhhhhhhhhccccCceEEEC
Confidence 3577889999976 77777777776541 014 478888874210 00000011111 111111
Q ss_pred ccCCCCCHHHHHhccCCcEEEeecCCCCC--------------CCHHHHHHHHcCCCCcEEEecC
Q 007112 422 EHAPIKSLLDAVKAIKPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 422 ~~~~~~~L~eaV~~vkPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLS 472 (617)
+..+..++.++ ...++|++|=+.+.... -|..+++++.+..-+ |||.=|
T Consensus 76 Dl~d~~~~~~~-~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS 138 (362)
T 3sxp_A 76 DINNPLDLRRL-EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASS 138 (362)
T ss_dssp CTTCHHHHHHH-TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred CCCCHHHHHHh-hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCc
Confidence 11111234444 34479999987775431 134677777766655 888665
No 315
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=58.01 E-value=9 Score=36.99 Aligned_cols=33 Identities=18% Similarity=0.204 Sum_probs=26.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.+|+|+|||.||+..|..+.+ .|. .++.++|++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-----GGV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-----CCC------CcEEEEcCC
Confidence 379999999999999988764 253 278999985
No 316
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=58.00 E-value=9.3 Score=38.00 Aligned_cols=35 Identities=14% Similarity=0.192 Sum_probs=27.7
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
...+|||+|||.||+..|..+.+ .| .++.++|+..
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~~ 47 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGM-----NN-------ISCRIIESMP 47 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEecCC
Confidence 35789999999999999987754 25 3688999864
No 317
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=57.88 E-value=24 Score=33.66 Aligned_cols=77 Identities=13% Similarity=0.179 Sum_probs=41.5
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchh------hhc-ccCCC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKP------WAH-EHAPI 426 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~------fA~-~~~~~ 426 (617)
+++++++||.||++ ||...++..+.+ .| -+++++|++- .+ +...... +.. |-.+.
T Consensus 4 ~l~~k~~lVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~----~~---~~~~~~~~~~~~~~~~~Dv~~~ 65 (257)
T 3tpc_A 4 QLKSRVFIVTGASS---GLGAAVTRMLAQ-EG-------ATVLGLDLKP----PA---GEEPAAELGAAVRFRNADVTNE 65 (257)
T ss_dssp CCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESSC----C---------------CEEEECCTTCH
T ss_pred ccCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----HH---HHHHHHHhCCceEEEEccCCCH
Confidence 57888999999854 444455555554 36 3588888752 11 1111111 111 11222
Q ss_pred CCHHHHHhcc-----CCcEEEeecCCC
Q 007112 427 KSLLDAVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 427 ~~L~eaV~~v-----kPtvLIG~S~~~ 448 (617)
.++.++++.+ +.|+||=..+..
T Consensus 66 ~~v~~~~~~~~~~~g~id~lv~nAg~~ 92 (257)
T 3tpc_A 66 ADATAALAFAKQEFGHVHGLVNCAGTA 92 (257)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3455666654 799999776654
No 318
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=57.71 E-value=9.6 Score=38.78 Aligned_cols=36 Identities=14% Similarity=0.136 Sum_probs=27.3
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 355 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 355 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
.+.-+|+|+|||.||+..|-.|.+. |+ ++.++|+.-
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~-----G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQS-----GI-------DCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 3456899999999999999888653 64 577888764
No 319
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=57.63 E-value=5.8 Score=40.57 Aligned_cols=97 Identities=15% Similarity=0.107 Sum_probs=53.1
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHH
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAV 433 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 433 (617)
.++..||.|+|+|..|...++.+.. +..|. +-+.++|++ .++ .....+.|--......++.|++
T Consensus 20 ~m~~~rvgiIG~G~~g~~~~~~l~~---~~~~~------~lvav~d~~----~~~---~~~~a~~~g~~~~~~~~~~~ll 83 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGSDHLRRLAN---TVSGV------EVVAVCDIV----AGR---AQAALDKYAIEAKDYNDYHDLI 83 (357)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHH---TCTTE------EEEEEECSS----TTH---HHHHHHHHTCCCEEESSHHHHH
T ss_pred CCCeeeEEEECCcHHHHHHHHHHHh---hCCCc------EEEEEEeCC----HHH---HHHHHHHhCCCCeeeCCHHHHh
Confidence 3445799999999988766655532 11121 224467763 221 2222233311112247899999
Q ss_pred hccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEE
Q 007112 434 KAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIF 469 (617)
Q Consensus 434 ~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 469 (617)
+.-++|+++ +++.. .+..++++...+.. ++|+.
T Consensus 84 ~~~~~D~V~-i~tp~-~~h~~~~~~al~aG-k~Vl~ 116 (357)
T 3ec7_A 84 NDKDVEVVI-ITASN-EAHADVAVAALNAN-KYVFC 116 (357)
T ss_dssp HCTTCCEEE-ECSCG-GGHHHHHHHHHHTT-CEEEE
T ss_pred cCCCCCEEE-EcCCc-HHHHHHHHHHHHCC-CCEEe
Confidence 987899988 55544 45555555544322 45553
No 320
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=57.54 E-value=7.4 Score=38.86 Aligned_cols=35 Identities=20% Similarity=0.299 Sum_probs=27.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 403 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GL 403 (617)
+-.|+|+|||.||+..|-.|.+ .|+ ++.++|++-.
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~-----~G~-------~V~l~E~~~~ 38 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKRPE 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCCC
Confidence 4579999999999999988865 363 5778887653
No 321
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=57.26 E-value=22 Score=35.85 Aligned_cols=86 Identities=17% Similarity=0.083 Sum_probs=55.0
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhc
Q 007112 357 DQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKA 435 (617)
Q Consensus 357 d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~ 435 (617)
..||+++|+ |..|--+++.+.+. |. +-++.+|.+.- +. + .+ ..+-..++.|+.+.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~-----g~------~~V~~V~p~~~---g~-~-------~~--G~~vy~sl~el~~~ 62 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAY-----GT------KMVGGVTPGKG---GT-T-------HL--GLPVFNTVREAVAA 62 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-----TC------EEEEEECTTCT---TC-E-------ET--TEEEESSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-----CC------eEEEEeCCCcc---cc-e-------eC--CeeccCCHHHHhhc
Confidence 468999999 99887776665432 53 35778887511 01 1 01 11123679999885
Q ss_pred cCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEE
Q 007112 436 IKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVI 468 (617)
Q Consensus 436 vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPII 468 (617)
.+||+.| +.+.+ .+..+++++..+..-+.+|
T Consensus 63 ~~~D~vi-I~tP~-~~~~~~~~ea~~~Gi~~iV 93 (288)
T 2nu8_A 63 TGATASV-IYVPA-PFCKDSILEAIDAGIKLII 93 (288)
T ss_dssp HCCCEEE-ECCCG-GGHHHHHHHHHHTTCSEEE
T ss_pred CCCCEEE-EecCH-HHHHHHHHHHHHCCCCEEE
Confidence 5699888 33333 5889999988877666533
No 322
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=57.07 E-value=13 Score=34.38 Aligned_cols=101 Identities=16% Similarity=0.079 Sum_probs=56.0
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-ccCCCCCHHHH
Q 007112 355 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDA 432 (617)
Q Consensus 355 l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~ea 432 (617)
++..+|+|.|| |-.|..+++.+++ .| ...++++++++. ++.+.+.. ...+.. +..+..++.++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~-----~~-----~g~~V~~~~r~~----~~~~~~~~-~~~~~~~D~~d~~~~~~~ 66 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKE-----GS-----DKFVAKGLVRSA----QGKEKIGG-EADVFIGDITDADSINPA 66 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHH-----TT-----TTCEEEEEESCH----HHHHHTTC-CTTEEECCTTSHHHHHHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHh-----cC-----CCcEEEEEEcCC----CchhhcCC-CeeEEEecCCCHHHHHHH
Confidence 34578999996 6667777766654 22 014688887741 11011100 111111 11222357777
Q ss_pred HhccCCcEEEeecCCCCC----------------C-------------CHHHHHHHHcCCCCcEEEecC
Q 007112 433 VKAIKPTMLMGTSGVGKT----------------F-------------TKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 433 V~~vkPtvLIG~S~~~g~----------------F-------------teevv~~Ma~~~erPIIFaLS 472 (617)
++. +|++|=+.+.... | +..++++|.+..-+.|||.=|
T Consensus 67 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 67 FQG--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp HTT--CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HcC--CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 875 8999977764321 1 467788887665566777543
No 323
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=56.86 E-value=36 Score=32.97 Aligned_cols=37 Identities=27% Similarity=0.432 Sum_probs=26.7
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+|+++++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 3 ~l~~k~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~ 39 (274)
T 3e03_A 3 TLSGKTLFITGASR---GIGLAIALRAAR-DG-------ANVAIAAKS 39 (274)
T ss_dssp CCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCcEEEEECCCC---hHHHHHHHHHHH-CC-------CEEEEEecc
Confidence 57889999999864 555566666655 36 368999886
No 324
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=56.84 E-value=12 Score=40.60 Aligned_cols=36 Identities=31% Similarity=0.412 Sum_probs=20.6
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+++++++||.|||.+|.++|..+.+ .|. +++++|+.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~-----~G~-------~V~i~~R~ 396 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKE-----KGA-------KVVIANRT 396 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHH-----HCC--------CEEEESS
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 5788899999998555555555543 262 57888774
No 325
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=56.79 E-value=10 Score=40.34 Aligned_cols=35 Identities=23% Similarity=0.275 Sum_probs=28.4
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
...+|+|+|+|.||+..|..|... |. ++.++|+..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~~ 155 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRYD 155 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeccC
Confidence 357899999999999999998753 53 588998853
No 326
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=56.72 E-value=9.9 Score=38.73 Aligned_cols=32 Identities=22% Similarity=0.320 Sum_probs=25.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 359 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 359 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
+|+|+|||.||+..|..|.+. | .++.++++..
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~-----G-------~~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNA-----G-------KKVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHc-----C-------CeEEEEecCC
Confidence 699999999999999988753 6 3577887643
No 327
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=56.69 E-value=7 Score=37.47 Aligned_cols=83 Identities=19% Similarity=0.338 Sum_probs=54.4
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccC
Q 007112 359 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 437 (617)
Q Consensus 359 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 437 (617)
||+|.|| |-.|..+++.|++ .| .+++.+|+. .. ++. +..++.++++..+
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~-D~~-----------d~~~~~~~~~~~~ 56 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNP-----EE-------YDIYPFDKK------LL-DIT-----------NISQVQQVVQEIR 56 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCT-----TT-------EEEEEECTT------TS-CTT-----------CHHHHHHHHHHHC
T ss_pred EEEEECCCCHHHHHHHHHHHh-----CC-------CEEEEeccc------cc-CCC-----------CHHHHHHHHHhcC
Confidence 8999996 8777777776643 24 368888871 11 122 1235778888778
Q ss_pred CcEEEeecCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007112 438 PTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 438 PtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 472 (617)
+|++|=+.+.... .+..+++++.+..-| +||.=|
T Consensus 57 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~v~~SS 106 (287)
T 3sc6_A 57 PHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAK-LVYIST 106 (287)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCE-EEEEEE
T ss_pred CCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCe-EEEEch
Confidence 9999988776531 134577777765554 887654
No 328
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=56.68 E-value=13 Score=36.90 Aligned_cols=101 Identities=13% Similarity=0.205 Sum_probs=58.6
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhch----------hhhc-c
Q 007112 355 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKK----------PWAH-E 422 (617)
Q Consensus 355 l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~----------~fA~-~ 422 (617)
++..+|+|.|| |-.|..+++.|++ .| .+++.+|+.- ....+.+...+. .+.. +
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~D 89 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLK-----LD-------QKVVGLDNFA---TGHQRNLDEVRSLVSEKQWSNFKFIQGD 89 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCHHHHHHHHHHSCHHHHTTEEEEECC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCC---ccchhhHHHHhhhcccccCCceEEEECC
Confidence 45679999998 8777777777754 25 3688888742 111011221111 1111 1
Q ss_pred cCCCCCHHHHHhccCCcEEEeecCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007112 423 HAPIKSLLDAVKAIKPTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 423 ~~~~~~L~eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 472 (617)
..+..++.++++ ++|++|=+.+..+. -|..+++++.+..-+-|||.=|
T Consensus 90 l~d~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 153 (352)
T 1sb8_A 90 IRNLDDCNNACA--GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 153 (352)
T ss_dssp TTSHHHHHHHHT--TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 112235777777 59999998886431 1345677776665566887544
No 329
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=56.43 E-value=9.2 Score=40.14 Aligned_cols=35 Identities=17% Similarity=0.192 Sum_probs=27.1
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCc
Q 007112 359 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 403 (617)
Q Consensus 359 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GL 403 (617)
||||+|||.||+-.|..+.+. |. .-+|.++|+..-
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~-----~~~V~lie~~~~ 36 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DK-----ESDIIIFEKDRD 36 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CS-----SSCEEEEESSSC
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CC-----CCcEEEEeCCCC
Confidence 799999999999999887643 42 236889987643
No 330
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=56.37 E-value=10 Score=36.35 Aligned_cols=87 Identities=14% Similarity=0.199 Sum_probs=54.6
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHH
Q 007112 355 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAV 433 (617)
Q Consensus 355 l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 433 (617)
-...+|+|.|| |-.|..+++.|++ .| .+++.+|++ ..| +.+ ..++.+++
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~D-l~d-----------~~~~~~~~ 59 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKG-----KN-------VEVIPTDVQ------DLD-ITN-----------VLAVNKFF 59 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTT-----SS-------EEEEEECTT------TCC-TTC-----------HHHHHHHH
T ss_pred cccceEEEECCCChHHHHHHHHHHh-----CC-------CeEEeccCc------cCC-CCC-----------HHHHHHHH
Confidence 34578999987 7677777766643 24 368888774 111 221 13577778
Q ss_pred hccCCcEEEeecCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007112 434 KAIKPTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 434 ~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 472 (617)
+.+++|++|=+.+.... -+..+++++.+..- .|||.=|
T Consensus 60 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS 113 (292)
T 1vl0_A 60 NEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQIST 113 (292)
T ss_dssp HHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred HhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEech
Confidence 76689999988876431 03567777766544 7888655
No 331
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=56.33 E-value=10 Score=39.71 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+.+|||+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 36 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVE-----QG-------AQVTLIERG 36 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 4689999999999999987754 25 379999987
No 332
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=56.23 E-value=8.1 Score=38.20 Aligned_cols=101 Identities=14% Similarity=0.206 Sum_probs=60.6
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhch----------hhhc-c
Q 007112 355 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKK----------PWAH-E 422 (617)
Q Consensus 355 l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~----------~fA~-~ 422 (617)
++..+|+|.|| |-.|..+++.|++ .| .+++.+|+..- .....+...+. .+.. +
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D 87 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLK-----LN-------QVVIGLDNFST---GHQYNLDEVKTLVSTEQWSRFCFIEGD 87 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCSS---CCHHHHHHHHHTSCHHHHTTEEEEECC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCCC---CchhhhhhhhhccccccCCceEEEEcc
Confidence 45689999996 8888888877764 25 46888887521 11111111110 1111 1
Q ss_pred cCCCCCHHHHHhccCCcEEEeecCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007112 423 HAPIKSLLDAVKAIKPTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 423 ~~~~~~L~eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 472 (617)
..+..++.++++ ++|++|=+.+.... -|..+++++.+..-+.+||.=|
T Consensus 88 l~d~~~~~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 88 IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp TTCHHHHHHHTT--TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 122235777777 59999988875421 1345788888777778998643
No 333
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=56.21 E-value=9.3 Score=38.68 Aligned_cols=35 Identities=20% Similarity=0.280 Sum_probs=27.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 403 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GL 403 (617)
+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..-
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~V~viE~~~~ 40 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGR-----QGH-------RVVVVEQARR 40 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSCC
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCCC
Confidence 4689999999999999988865 364 5788887643
No 334
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=56.21 E-value=8.1 Score=40.55 Aligned_cols=38 Identities=16% Similarity=0.166 Sum_probs=27.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 404 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi 404 (617)
..+|||+|||.||+..|..|.+. ..| .+|.++|+..-+
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~---~~g-------~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRL---DPE-------AHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHH---CTT-------SEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhh---CcC-------CCEEEEECCCcc
Confidence 46899999999999999988654 012 478889887543
No 335
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=56.13 E-value=9.4 Score=36.37 Aligned_cols=78 Identities=24% Similarity=0.336 Sum_probs=44.3
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhh-------cccCC
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA-------HEHAP 425 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA-------~~~~~ 425 (617)
.+++++++||.||++ ||...++..+.+ .| -+++++|++- +.+...+..+. -|..+
T Consensus 5 m~l~~k~vlITGas~---gIG~~~a~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~~ 66 (261)
T 3n74_A 5 MSLEGKVALITGAGS---GFGEGMAKRFAK-GG-------AKVVIVDRDK-------AGAERVAGEIGDAALAVAADISK 66 (261)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHHHCTTEEEEECCTTS
T ss_pred ccCCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEcCCH-------HHHHHHHHHhCCceEEEEecCCC
Confidence 467889999999864 344444444444 36 3688888741 11222222111 11122
Q ss_pred CCCHHHHHhcc-----CCcEEEeecCCC
Q 007112 426 IKSLLDAVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 426 ~~~L~eaV~~v-----kPtvLIG~S~~~ 448 (617)
..++.++++.+ ++|+||=..+..
T Consensus 67 ~~~~~~~~~~~~~~~g~id~li~~Ag~~ 94 (261)
T 3n74_A 67 EADVDAAVEAALSKFGKVDILVNNAGIG 94 (261)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 23466666655 899999877754
No 336
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=56.11 E-value=11 Score=39.10 Aligned_cols=36 Identities=19% Similarity=0.329 Sum_probs=27.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
.+|||+|||.||+..|..|.+.+.. | -+|.++|+.-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~--g-------~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGS--G-------HEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGG--G-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCCC--c-------CEEEEEeCCC
Confidence 5899999999999999999774321 2 4677777654
No 337
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=55.84 E-value=5.7 Score=38.57 Aligned_cols=99 Identities=11% Similarity=0.116 Sum_probs=58.2
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcc--cCCchhchhhhc-ccCCCCCHHHH
Q 007112 357 DQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRK--ESLQHFKKPWAH-EHAPIKSLLDA 432 (617)
Q Consensus 357 d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~--~~L~~~k~~fA~-~~~~~~~L~ea 432 (617)
..+|+|.|| |-.|..+++.|++. | ..++..++++. +.. ..+......+.+ +-.+..+|.++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-----g------~~~V~~~~R~~----~~~~~~~l~~~~~~~~~~D~~d~~~l~~~ 69 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED-----G------TFKVRVVTRNP----RKKAAKELRLQGAEVVQGDQDDQVIMELA 69 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-----C------SSEEEEEESCT----TSHHHHHHHHTTCEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhc-----C------CceEEEEEcCC----CCHHHHHHHHCCCEEEEecCCCHHHHHHH
Confidence 468999998 88888888877653 4 13677777751 110 001111111111 11222467888
Q ss_pred HhccCCcEEEeecCCCCC--------CCHHHHHHHHcCCCCcEEEecCC
Q 007112 433 VKAIKPTMLMGTSGVGKT--------FTKEVVEAMASFNEKPVIFALSN 473 (617)
Q Consensus 433 V~~vkPtvLIG~S~~~g~--------Fteevv~~Ma~~~erPIIFaLSN 473 (617)
++. +|++|-+++.... .++.++++|.+..-+-||| .|-
T Consensus 70 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~-~S~ 115 (299)
T 2wm3_A 70 LNG--AYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVY-SGL 115 (299)
T ss_dssp HTT--CSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE-CCC
T ss_pred Hhc--CCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEE-EcC
Confidence 876 8999987653211 2557788887666667888 664
No 338
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=55.82 E-value=12 Score=37.61 Aligned_cols=36 Identities=14% Similarity=0.230 Sum_probs=28.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
+..|+|+|||.+|+.+|-.|.+. .|. .++.++|+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~----~G~------~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKN----HGI------TNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HCC------CCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHh----cCC------CcEEEEeCCC
Confidence 56899999999999999988761 151 3689999876
No 339
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=55.74 E-value=23 Score=34.01 Aligned_cols=78 Identities=24% Similarity=0.262 Sum_probs=43.7
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc----------c
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH----------E 422 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~----------~ 422 (617)
.+|+++++||.||++ ||...++..+.++ | -+++++|++- +.+......+.. |
T Consensus 8 ~~l~~k~vlVTGas~---gIG~~ia~~l~~~-G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~D 69 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAA---GIGRAIAGTFAKA-G-------ASVVVTDLKS-------EGAEAVAAAIRQAGGKAIGLECN 69 (256)
T ss_dssp TCCTTCEEEECSCSS---HHHHHHHHHHHHH-T-------CEEEEEESSH-------HHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCCCEEEEECCCC---HHHHHHHHHHHHC-C-------CEEEEEeCCH-------HHHHHHHHHHHhcCCcEEEEECC
Confidence 457889999999865 4445555555543 6 3588888741 112221111111 1
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEeecCCC
Q 007112 423 HAPIKSLLDAVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 423 ~~~~~~L~eaV~~v-----kPtvLIG~S~~~ 448 (617)
..+..++.++++.+ ++|+||=..+..
T Consensus 70 v~d~~~v~~~~~~~~~~~g~id~lv~nAg~~ 100 (256)
T 3gaf_A 70 VTDEQHREAVIKAALDQFGKITVLVNNAGGG 100 (256)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 11122455556554 799999877654
No 340
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=55.70 E-value=9.4 Score=37.89 Aligned_cols=35 Identities=11% Similarity=0.245 Sum_probs=28.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcc
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 404 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi 404 (617)
..|+|+|||.+|+.+|-.|.+. |+ ++.++|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~-----G~-------~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRA-----GL-------NVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHT-----TC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCCCC
Confidence 4799999999999999888652 63 68999987543
No 341
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=55.65 E-value=5.9 Score=45.15 Aligned_cols=35 Identities=26% Similarity=0.432 Sum_probs=31.2
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
++.||+++|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d 444 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 444 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCC
Confidence 678999999999999999988764 76 789999987
No 342
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=55.62 E-value=9.2 Score=37.62 Aligned_cols=36 Identities=22% Similarity=0.251 Sum_probs=29.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+|++.++||+|+|..|..-++.|..+ | -++.++|.+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~-----G-------A~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQE-----G-------AAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGG-----C-------CCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEECCC
Confidence 57889999999999999988888653 5 368888864
No 343
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=55.60 E-value=10 Score=39.96 Aligned_cols=31 Identities=19% Similarity=0.237 Sum_probs=25.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 359 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 359 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
||.|+|+|..|..+|..+++. | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~-----G-------~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR-----G-------HEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 799999999999999988653 5 358888874
No 344
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=55.44 E-value=13 Score=38.52 Aligned_cols=38 Identities=18% Similarity=0.170 Sum_probs=30.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 404 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi 404 (617)
..+|||+|||.||+..|..+.+. |. ..++.++|+..-+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~lie~~~~~ 44 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQA-----GY-----QGLITVVGDEAER 44 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHH-----TC-----CSCEEEEESSCSC
T ss_pred CCcEEEECChHHHHHHHHHHHcc-----CC-----CCeEEEEECCCCC
Confidence 46899999999999999988753 53 1369999987644
No 345
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=55.37 E-value=12 Score=37.22 Aligned_cols=34 Identities=18% Similarity=0.282 Sum_probs=27.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
+..|+|+|||.+|+.+|-.|.+ .| .++.++|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~-----~G-------~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILAR-----KG-------YSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeccC
Confidence 4689999999999999988854 35 4699999864
No 346
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=55.23 E-value=10 Score=45.09 Aligned_cols=37 Identities=24% Similarity=0.379 Sum_probs=33.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.|+..||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 24 rL~~s~VlIvG~GGlGseiak~La~a-----GV------g~itlvD~D 60 (1015)
T 3cmm_A 24 KMQTSNVLILGLKGLGVEIAKNVVLA-----GV------KSMTVFDPE 60 (1015)
T ss_dssp HHTTCEEEEECCSHHHHHHHHHHHHH-----CC------SEEEEECCS
T ss_pred HHhcCEEEEECCChHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 57789999999999999999999876 76 789999987
No 347
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=55.00 E-value=17 Score=33.45 Aligned_cols=94 Identities=14% Similarity=0.199 Sum_probs=52.2
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-ccCC-CCCHHHHHhc
Q 007112 359 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAP-IKSLLDAVKA 435 (617)
Q Consensus 359 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~-~~~L~eaV~~ 435 (617)
||+|.|| |-.|-.+++.|+ + .| -+++.++++. ++...+ .+..+.. +..+ ..++.++++.
T Consensus 2 ~ilItGatG~iG~~l~~~L~----~-~g-------~~V~~~~R~~----~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~ 63 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLS----T-TD-------YQIYAGARKV----EQVPQY--NNVKAVHFDVDWTPEEMAKQLHG 63 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHT----T-SS-------CEEEEEESSG----GGSCCC--TTEEEEECCTTSCHHHHHTTTTT
T ss_pred eEEEECCCCHHHHHHHHHHH----H-CC-------CEEEEEECCc----cchhhc--CCceEEEecccCCHHHHHHHHcC
Confidence 6899994 666666665554 3 35 4688888762 111111 1111111 2122 2346666764
Q ss_pred cCCcEEEeecCCCCC--------CCHHHHHHHHcCCCCcEEEecC
Q 007112 436 IKPTMLMGTSGVGKT--------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 436 vkPtvLIG~S~~~g~--------Fteevv~~Ma~~~erPIIFaLS 472 (617)
+|++|=+.+.... -+..++++|.+..-+.|||.=|
T Consensus 64 --~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 64 --MDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp --CSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred --CCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 8999987775431 1456788877655556666444
No 348
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=55.00 E-value=8.5 Score=39.87 Aligned_cols=112 Identities=13% Similarity=0.138 Sum_probs=51.0
Q ss_pred HHHHHHhCCCCCC-ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhccc
Q 007112 345 LSALKLVGGTLAD-QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEH 423 (617)
Q Consensus 345 l~Alr~~g~~l~d-~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~ 423 (617)
|+.-.+....+++ -||-|+|+|..|..-++.+...-.....+. +-.+=+-++|++ .. ......+.|-- .
T Consensus 13 ~~~~~~~~~~Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~--~~~elvav~d~~----~~---~a~~~a~~~~~-~ 82 (412)
T 4gqa_A 13 LGTENLYFQSMSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLP--KRPHLYALADQD----QA---MAERHAAKLGA-E 82 (412)
T ss_dssp ------------CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSS--SEEEEEEEECSS----HH---HHHHHHHHHTC-S
T ss_pred cccccCccccccccceEEEEcCcHHHHHHHHHHHhccccccccC--CCeEEEEEEcCC----HH---HHHHHHHHcCC-C
Confidence 4444555566766 599999999887665555543311100010 001123355653 11 12222222311 0
Q ss_pred CCCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHc----CCCCcE
Q 007112 424 APIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMAS----FNEKPV 467 (617)
Q Consensus 424 ~~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~----~~erPI 467 (617)
.-..++.|.++.-++|+++ +++....=-+-++++|.+ .+|+|+
T Consensus 83 ~~y~d~~~ll~~~~vD~V~-I~tp~~~H~~~~~~al~aGkhVl~EKP~ 129 (412)
T 4gqa_A 83 KAYGDWRELVNDPQVDVVD-ITSPNHLHYTMAMAAIAAGKHVYCEKPL 129 (412)
T ss_dssp EEESSHHHHHHCTTCCEEE-ECSCGGGHHHHHHHHHHTTCEEEEESCS
T ss_pred eEECCHHHHhcCCCCCEEE-ECCCcHHHHHHHHHHHHcCCCeEeecCC
Confidence 1237899999988899877 666553323444444543 345554
No 349
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=54.97 E-value=8.3 Score=36.75 Aligned_cols=98 Identities=14% Similarity=0.128 Sum_probs=54.2
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhcc
Q 007112 359 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKAI 436 (617)
Q Consensus 359 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~v 436 (617)
||+|.|| |-.|..+++.|++. ..| -+++.+|++. ++.+.+......+.. +..+..++.++++.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~- 65 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKT---VPA-------SQIVAIVRNP----AKAQALAAQGITVRQADYGDEAALTSALQG- 65 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTCHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred CEEEEcCCchHHHHHHHHHHhh---CCC-------ceEEEEEcCh----HhhhhhhcCCCeEEEcCCCCHHHHHHHHhC-
Confidence 5889997 77777777766431 003 3578887641 111111111111111 11222357777775
Q ss_pred CCcEEEeecCCCC----CCCHHHHHHHHcCCCCcEEEecC
Q 007112 437 KPTMLMGTSGVGK----TFTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 437 kPtvLIG~S~~~g----~Fteevv~~Ma~~~erPIIFaLS 472 (617)
+|++|=+++... ..++.++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 66 -VEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp -CSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -CCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 799998776421 24788899988766667887544
No 350
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=54.86 E-value=34 Score=33.36 Aligned_cols=78 Identities=17% Similarity=0.230 Sum_probs=45.6
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc----------c
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH----------E 422 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~----------~ 422 (617)
.+|+++++||.||++ ||...++..+.+ .| -+++++|++ . +.+...+..+.. |
T Consensus 28 ~~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~----~---~~~~~~~~~~~~~~~~~~~~~~D 89 (276)
T 3r1i_A 28 FDLSGKRALITGAST---GIGKKVALAYAE-AG-------AQVAVAARH----S---DALQVVADEIAGVGGKALPIRCD 89 (276)
T ss_dssp GCCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESS----G---GGGHHHHHHHHHTTCCCEEEECC
T ss_pred cCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCC----H---HHHHHHHHHHHhcCCeEEEEEcC
Confidence 368889999999864 444555555554 36 368888874 1 123332222221 1
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEeecCCC
Q 007112 423 HAPIKSLLDAVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 423 ~~~~~~L~eaV~~v-----kPtvLIG~S~~~ 448 (617)
-.+..++.++++.+ ++|+||=..+..
T Consensus 90 l~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 120 (276)
T 3r1i_A 90 VTQPDQVRGMLDQMTGELGGIDIAVCNAGIV 120 (276)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 11123456666655 799999777654
No 351
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=54.74 E-value=28 Score=35.59 Aligned_cols=104 Identities=21% Similarity=0.273 Sum_probs=57.9
Q ss_pred CccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccC
Q 007112 332 DIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKES 411 (617)
Q Consensus 332 DiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~ 411 (617)
+.++.....++..+.|++..+.. .+++++|.|||..|...+.+.. + .|. ++++.+|+.
T Consensus 159 ~~~aal~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak-~----~Ga------~~Vi~~~~~---------- 216 (370)
T 4ej6_A 159 PVHGAFCEPLACCLHGVDLSGIK-AGSTVAILGGGVIGLLTVQLAR-L----AGA------TTVILSTRQ---------- 216 (370)
T ss_dssp TTGGGGHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHH-H----TTC------SEEEEECSC----------
T ss_pred HHHHhhhhHHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHH-H----cCC------CEEEEECCC----------
Confidence 34554444566666677655543 5689999999877665544432 2 364 578877753
Q ss_pred Cchhchhhhcc-------cCCCCCHHHHHhc---c---CCcEEEeecCCCCCCCHHHHHHHH
Q 007112 412 LQHFKKPWAHE-------HAPIKSLLDAVKA---I---KPTMLMGTSGVGKTFTKEVVEAMA 460 (617)
Q Consensus 412 L~~~k~~fA~~-------~~~~~~L~eaV~~---v---kPtvLIG~S~~~g~Fteevv~~Ma 460 (617)
+.+..+|+. .....++.+.++. . +.|++|=+++.+ ..-++.++.++
T Consensus 217 --~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G~~-~~~~~~~~~l~ 275 (370)
T 4ej6_A 217 --ATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVA-ETVKQSTRLAK 275 (370)
T ss_dssp --HHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSCCH-HHHHHHHHHEE
T ss_pred --HHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCCCH-HHHHHHHHHhc
Confidence 122223331 1112467777765 2 578888777633 22334444443
No 352
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=54.73 E-value=11 Score=36.77 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=26.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
..|+|+|||.+|+..|..|.+ .|+ ++.++|+.-
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~-----~G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEECCC
Confidence 479999999999999988865 364 588888763
No 353
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=54.72 E-value=11 Score=38.70 Aligned_cols=37 Identities=24% Similarity=0.305 Sum_probs=29.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 404 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi 404 (617)
+..|||+|||.+|+..|-.|.+ .|. +++.++|+....
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~-----~G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLAR-----RGY------TNVTVLDPYPVP 42 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----cCC------CcEEEEeCCCCC
Confidence 4579999999999999988865 364 379999987553
No 354
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=54.72 E-value=11 Score=39.32 Aligned_cols=36 Identities=22% Similarity=0.326 Sum_probs=28.4
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
...+|+|+|||.||+..|..|.+ .|.. .++.++|++
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~-----~G~~-----~~V~v~E~~ 40 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA-----EKAF-----DQVTLFERR 40 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-----TTCC-----SEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh-----cCCC-----CCeEEEecC
Confidence 35689999999999999988864 3541 378899886
No 355
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=54.70 E-value=16 Score=40.43 Aligned_cols=38 Identities=11% Similarity=0.205 Sum_probs=30.6
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcc
Q 007112 355 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 404 (617)
Q Consensus 355 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi 404 (617)
+++.+|||+|||.||+..|-.|.+ .|+ ++.++|+.-..
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar-----~G~-------~V~LiEr~~~~ 58 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHK-----LGH-------DVTIYERSAFP 58 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHc-----CCC-------CEEEEcCCCCC
Confidence 567899999999999999987764 363 68999998443
No 356
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=54.42 E-value=18 Score=35.74 Aligned_cols=81 Identities=11% Similarity=0.169 Sum_probs=45.1
Q ss_pred CCCCCCceEEEeCcCh---HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhh------cc
Q 007112 352 GGTLADQTFLFLGAGE---AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA------HE 422 (617)
Q Consensus 352 g~~l~d~riv~~GAGs---Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA------~~ 422 (617)
..+|+++++||.||++ .|..||+.+++ .| -+++++|++. ...+.+......+. -|
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~-----~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~D 88 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCA-----QG-------AEVALTYLSE----TFKKRVDPLAESLGVKLTVPCD 88 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESSG----GGHHHHHHHHHHHTCCEEEECC
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHH-----CC-------CEEEEEeCCh----HHHHHHHHHHHhcCCeEEEEcC
Confidence 3468889999999973 44446666654 36 3588888761 11111111111110 01
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEeecCCC
Q 007112 423 HAPIKSLLDAVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 423 ~~~~~~L~eaV~~v-----kPtvLIG~S~~~ 448 (617)
-.+..++.++++.+ +.|+||=..+..
T Consensus 89 v~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 119 (296)
T 3k31_A 89 VSDAESVDNMFKVLAEEWGSLDFVVHAVAFS 119 (296)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 11223456666655 799999877754
No 357
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=54.18 E-value=12 Score=37.88 Aligned_cols=35 Identities=14% Similarity=0.301 Sum_probs=28.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcc
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 404 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi 404 (617)
..|||+|||.+|+.+|-.+.+ .|. ++.++|+....
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~-----~G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAE-----RGH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCCCC
Confidence 579999999999999988865 363 58999987654
No 358
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=54.10 E-value=11 Score=39.93 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
+.+++|+|||.||+..|..+.+ .| .++.++|++.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~-----~G-------~~V~liEk~~ 58 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQ-----LG-------MKVAVVEKRS 58 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCC
Confidence 4689999999999999988865 25 4689999764
No 359
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=53.90 E-value=9.6 Score=40.11 Aligned_cols=35 Identities=20% Similarity=0.236 Sum_probs=28.4
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
++.++||+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~-----~g-------~~V~lie~~~ 39 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQ-----LG-------LKVLAVEAGE 39 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 35789999999999999988854 25 3799999874
No 360
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=53.81 E-value=29 Score=33.11 Aligned_cols=38 Identities=24% Similarity=0.397 Sum_probs=25.2
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
..|+++++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 8 ~~l~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~ 45 (252)
T 3f1l_A 8 DLLNDRIILVTGASD---GIGREAAMTYAR-YG-------ATVILLGRN 45 (252)
T ss_dssp TTTTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred cccCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 458889999999854 344445555544 36 368888874
No 361
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=53.75 E-value=13 Score=40.59 Aligned_cols=36 Identities=22% Similarity=0.212 Sum_probs=29.3
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 355 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 355 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
..+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~ 42 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGE 42 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 345789999999999999998864 364 589999874
No 362
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=53.54 E-value=13 Score=37.50 Aligned_cols=33 Identities=15% Similarity=0.299 Sum_probs=26.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
.+|+|+|||.||+..|-.|.+. |+ ++.++|+.-
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 4799999999999999888653 64 577888764
No 363
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=53.46 E-value=36 Score=32.84 Aligned_cols=76 Identities=11% Similarity=0.046 Sum_probs=42.3
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-ccCCCCCHHHHH
Q 007112 355 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAV 433 (617)
Q Consensus 355 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV 433 (617)
++++++||.||++ ||...++..+.+ .| -+++++|++- .. +...+..+.. |-.+..++.+++
T Consensus 26 ~~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~----~~---~~~~~~~~~~~Dv~d~~~v~~~~ 87 (260)
T 3un1_A 26 NQQKVVVITGASQ---GIGAGLVRAYRD-RN-------YRVVATSRSI----KP---SADPDIHTVAGDISKPETADRIV 87 (260)
T ss_dssp TTCCEEEESSCSS---HHHHHHHHHHHH-TT-------CEEEEEESSC----CC---CSSTTEEEEESCTTSHHHHHHHH
T ss_pred cCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----hh---cccCceEEEEccCCCHHHHHHHH
Confidence 5678999999754 444445555544 36 3688888751 11 1111111111 222223455666
Q ss_pred hcc-----CCcEEEeecCCC
Q 007112 434 KAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 434 ~~v-----kPtvLIG~S~~~ 448 (617)
+.+ ++|+||=..+..
T Consensus 88 ~~~~~~~g~iD~lv~nAg~~ 107 (260)
T 3un1_A 88 REGIERFGRIDSLVNNAGVF 107 (260)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHCCCCCEEEECCCCC
Confidence 654 799999877654
No 364
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=53.34 E-value=8.2 Score=40.49 Aligned_cols=30 Identities=23% Similarity=0.441 Sum_probs=24.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 359 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 359 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
||.|+|+|..|..+|..+.+ | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La~------G-------~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL------Q-------NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT------T-------SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC------C-------CEEEEEECC
Confidence 79999999999999887742 3 358888874
No 365
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=53.26 E-value=14 Score=35.43 Aligned_cols=38 Identities=29% Similarity=0.403 Sum_probs=24.9
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.+|+++++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 2 ~~l~gk~vlVTGas~---gIG~a~a~~l~~-~G-------~~V~~~~r~ 39 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQ---GIGKAIAARLAA-DG-------ATVIVSDIN 39 (247)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEECSC
T ss_pred CCcCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 357889999999854 444445555544 36 358888764
No 366
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=53.20 E-value=9.6 Score=37.19 Aligned_cols=33 Identities=21% Similarity=0.256 Sum_probs=26.8
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 400 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~ 400 (617)
...+|+|+|||.||+..|..+.+. |+ ++.++|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~-----g~-------~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARA-----EL-------KPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEec
Confidence 346899999999999999988652 53 5788887
No 367
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=53.14 E-value=12 Score=35.38 Aligned_cols=33 Identities=24% Similarity=0.306 Sum_probs=26.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+..|+|+|||.||+-.|..+.+ .| .++.++|+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~-----~g-------~~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQ-----KG-------VRVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CC-------CCEEEEecC
Confidence 4679999999999999988865 25 368888875
No 368
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=52.86 E-value=18 Score=36.55 Aligned_cols=59 Identities=20% Similarity=0.139 Sum_probs=36.1
Q ss_pred cCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 331 DDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 331 DDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
++.++.....++..+.|++..+. -.+++++|+|||..|...+.+.. + .|. ++++.+|+.
T Consensus 155 s~~~aa~~~~~~ta~~~l~~~~~-~~g~~VlV~GaG~vG~~aiqlak-~----~Ga------~~Vi~~~~~ 213 (363)
T 3m6i_A 155 SYENGAMLEPLSVALAGLQRAGV-RLGDPVLICGAGPIGLITMLCAK-A----AGA------CPLVITDID 213 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTC-CTTCCEEEECCSHHHHHHHHHHH-H----TTC------CSEEEEESC
T ss_pred CHHHHHhhhHHHHHHHHHHHcCC-CCCCEEEEECCCHHHHHHHHHHH-H----cCC------CEEEEECCC
Confidence 34444444445555666755543 35689999999877766554443 2 364 568888763
No 369
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=52.81 E-value=12 Score=39.50 Aligned_cols=33 Identities=30% Similarity=0.486 Sum_probs=27.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAA-----FG-------KRVALIESK 36 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CcEEEEcCC
Confidence 4689999999999999998865 25 469999986
No 370
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=52.81 E-value=16 Score=37.12 Aligned_cols=44 Identities=20% Similarity=0.126 Sum_probs=27.4
Q ss_pred HHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc
Q 007112 345 LSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 400 (617)
Q Consensus 345 l~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~ 400 (617)
+.|+...+.--.+++++|.|+|..|...+.++.. .|. +++.+|+
T Consensus 178 ~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~-----~Ga-------~Vi~~~~ 221 (363)
T 3uog_A 178 WFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKA-----TGA-------EVIVTSS 221 (363)
T ss_dssp HHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEec
Confidence 3444333444467899999999777666554432 362 5777775
No 371
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=52.81 E-value=12 Score=39.72 Aligned_cols=38 Identities=18% Similarity=0.264 Sum_probs=28.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.+|+|+|||.||+..|..+.+... .|++. .++.++|+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~--~G~~~----~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQE--KGAEI----PELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHH--TTCCC----CEEEEECSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhh--cCCCC----CcEEEEEcC
Confidence 489999999999999999876321 25420 138888876
No 372
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=52.76 E-value=18 Score=34.87 Aligned_cols=78 Identities=17% Similarity=0.160 Sum_probs=42.9
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhh---h----cccCC
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPW---A----HEHAP 425 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~f---A----~~~~~ 425 (617)
.+|+++++||.||+. ||...++..+.+ .| -+++++|++. + .+....... + -|..+
T Consensus 3 ~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~D~~~ 64 (260)
T 1nff_A 3 GRLTGKVALVSGGAR---GMGASHVRAMVA-EG-------AKVVFGDILD----E---EGKAMAAELADAARYVHLDVTQ 64 (260)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH----H---HHHHHHHHTGGGEEEEECCTTC
T ss_pred CCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCH----H---HHHHHHHHhhcCceEEEecCCC
Confidence 357888999999754 444555555554 36 3688887741 1 111111111 1 11122
Q ss_pred CCCHHHHHhcc-----CCcEEEeecCCC
Q 007112 426 IKSLLDAVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 426 ~~~L~eaV~~v-----kPtvLIG~S~~~ 448 (617)
..++.++++.+ ++|+||=..+..
T Consensus 65 ~~~v~~~~~~~~~~~g~iD~lv~~Ag~~ 92 (260)
T 1nff_A 65 PAQWKAAVDTAVTAFGGLHVLVNNAGIL 92 (260)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455666644 799999777654
No 373
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=52.72 E-value=20 Score=35.47 Aligned_cols=102 Identities=14% Similarity=0.097 Sum_probs=58.9
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCch-----hchhhhc-ccCCCC
Q 007112 355 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH-----FKKPWAH-EHAPIK 427 (617)
Q Consensus 355 l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~-----~k~~fA~-~~~~~~ 427 (617)
+++.+|+|.|| |-.|..+++.|++ .| .+++.+|++. .+...+.. .+..+.. +..+..
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 70 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQT-----MG-------ATVKGYSLTA----PTVPSLFETARVADGMQSEIGDIRDQN 70 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----SSSSCHHHHTTTTTTSEEEECCTTCHH
T ss_pred hCCCEEEEECCCchHHHHHHHHHHh-----CC-------CeEEEEeCCC----cccchhhHhhccCCceEEEEccccCHH
Confidence 34578999996 7777777777754 25 3688888752 11111110 0111111 112223
Q ss_pred CHHHHHhccCCcEEEeecCCCCC----------------CCHHHHHHHHcCC-CCcEEEecC
Q 007112 428 SLLDAVKAIKPTMLMGTSGVGKT----------------FTKEVVEAMASFN-EKPVIFALS 472 (617)
Q Consensus 428 ~L~eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~-erPIIFaLS 472 (617)
++.++++.+++|++|=+.+.+.. -|..+++++.+.. -+.|||.=|
T Consensus 71 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 71 KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred HHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 57788888889999988875421 0234666665544 467888655
No 374
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=52.62 E-value=14 Score=38.68 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=27.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
+.+|+|+|||.||+..|..+.+. | .++.++|+..
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 39 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL-----G-------FKTTCIEKRG 39 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 45799999999999999887653 5 3689999873
No 375
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=52.41 E-value=37 Score=32.68 Aligned_cols=38 Identities=37% Similarity=0.537 Sum_probs=25.6
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.++++.++||.||+. ||...++..+.+ .| -+++++|++
T Consensus 27 ~~l~~k~vlITGasg---gIG~~la~~L~~-~G-------~~V~~~~r~ 64 (272)
T 1yb1_A 27 KSVTGEIVLITGAGH---GIGRLTAYEFAK-LK-------SKLVLWDIN 64 (272)
T ss_dssp CCCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred cccCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEEcC
Confidence 457889999999753 455555555554 36 358888874
No 376
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=52.40 E-value=44 Score=31.71 Aligned_cols=77 Identities=17% Similarity=0.186 Sum_probs=42.0
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHH
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAV 433 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 433 (617)
+|+++++||.||++ ||...++..+.+ .| -+++++|++--+ .... -..+.-|..+..++.+++
T Consensus 4 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G-------~~V~~~~r~~~~-----~~~~--~~~~~~D~~d~~~~~~~~ 65 (250)
T 2fwm_X 4 DFSGKNVWVTGAGK---GIGYATALAFVE-AG-------AKVTGFDQAFTQ-----EQYP--FATEVMDVADAAQVAQVC 65 (250)
T ss_dssp CCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESCCCS-----SCCS--SEEEECCTTCHHHHHHHH
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEeCchhh-----hcCC--ceEEEcCCCCHHHHHHHH
Confidence 47788999999753 444555555554 36 368888875211 0010 001111212223455666
Q ss_pred hcc-----CCcEEEeecCCC
Q 007112 434 KAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 434 ~~v-----kPtvLIG~S~~~ 448 (617)
+.+ ++|+||=..+..
T Consensus 66 ~~~~~~~g~id~lv~~Ag~~ 85 (250)
T 2fwm_X 66 QRLLAETERLDALVNAAGIL 85 (250)
T ss_dssp HHHHHHCSCCCEEEECCCCC
T ss_pred HHHHHHcCCCCEEEECCCcC
Confidence 544 799999777653
No 377
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=52.40 E-value=25 Score=34.04 Aligned_cols=92 Identities=12% Similarity=0.144 Sum_probs=49.2
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhc
Q 007112 357 DQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKA 435 (617)
Q Consensus 357 d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~ 435 (617)
+.+|+|.|| |-.|..+++.|++ .| -+++.+|+. +.. + . .+.-+..+..++.++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~~---~-~-~~~~Dl~d~~~~~~~~~~ 58 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQ-----NN-------WHAVGCGFR------RAR---P-K-FEQVNLLDSNAVHHIIHD 58 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEC-----------------------------CHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHh-----CC-------CeEEEEccC------CCC---C-C-eEEecCCCHHHHHHHHHh
Confidence 368999998 7777777777653 25 367877753 101 0 1 111122233567788887
Q ss_pred cCCcEEEeecCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007112 436 IKPTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 436 vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 472 (617)
+++|++|=+.+.... -|..+++++.+..- .|||.=|
T Consensus 59 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 110 (315)
T 2ydy_A 59 FQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISS 110 (315)
T ss_dssp HCCSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred hCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 789999988775421 13457777765443 6777544
No 378
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=52.35 E-value=31 Score=33.26 Aligned_cols=40 Identities=23% Similarity=0.293 Sum_probs=26.5
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 352 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 352 g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
..+|+++++||.||++ ||...|+..+.+ .| -+++++|++.
T Consensus 8 ~~~l~gk~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~ 47 (278)
T 3sx2_A 8 EGPLTGKVAFITGAAR---GQGRAHAVRLAA-DG-------ADIIAVDLCD 47 (278)
T ss_dssp -CTTTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEECCS
T ss_pred CCCCCCCEEEEECCCC---hHHHHHHHHHHH-CC-------CeEEEEeccc
Confidence 4578899999999754 344445555544 36 3688898763
No 379
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=52.07 E-value=10 Score=36.38 Aligned_cols=77 Identities=22% Similarity=0.268 Sum_probs=43.1
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-------ccCCC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-------EHAPI 426 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~-------~~~~~ 426 (617)
+++++++||.||++ ||...++..+.+ .|. +++++|++- +.+......+.. |-.+.
T Consensus 6 ~l~gk~~lVTGas~---gIG~a~a~~l~~-~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~d~ 67 (248)
T 3op4_A 6 NLEGKVALVTGASR---GIGKAIAELLAE-RGA-------KVIGTATSE-------SGAQAISDYLGDNGKGMALNVTNP 67 (248)
T ss_dssp CCTTCEEEESSCSS---HHHHHHHHHHHH-TTC-------EEEEEESSH-------HHHHHHHHHHGGGEEEEECCTTCH
T ss_pred CCCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEeCCH-------HHHHHHHHHhcccceEEEEeCCCH
Confidence 57889999999864 444455555554 363 588887641 112222111111 11222
Q ss_pred CCHHHHHhcc-----CCcEEEeecCCC
Q 007112 427 KSLLDAVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 427 ~~L~eaV~~v-----kPtvLIG~S~~~ 448 (617)
.++.++++.+ ++|+||=..+..
T Consensus 68 ~~v~~~~~~~~~~~g~iD~lv~nAg~~ 94 (248)
T 3op4_A 68 ESIEAVLKAITDEFGGVDILVNNAGIT 94 (248)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3455566654 799999877754
No 380
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=52.01 E-value=46 Score=34.64 Aligned_cols=131 Identities=6% Similarity=-0.001 Sum_probs=85.3
Q ss_pred HHHhcCCCeeeeeecCCCCcHHHHHHHHcCCCceee--cCccchhHHHHHHHHHHHHHhC------CCCCCceEEEeCcC
Q 007112 295 VKQNYGEKVLIQFEDFANHNAFELLSKYSSSHLVFN--DDIQGTASVVLAGILSALKLVG------GTLADQTFLFLGAG 366 (617)
Q Consensus 295 v~~~fGp~~lIqfEDf~~~~Af~lL~ryr~~~~~FN--DDiQGTaaV~LAgll~Alr~~g------~~l~d~riv~~GAG 366 (617)
+-.+| .++++ +-.++ +.+.+.|.+|- ++||.| || .-=-.=+||=++.-.+..| +++++.||.++|-|
T Consensus 96 vls~~-~D~iv-iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~va~vGD~ 170 (328)
T 3grf_A 96 VFSRM-VDICT-ARLAT-KEMMREMAQHA-SVPCINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIKFAYCGDS 170 (328)
T ss_dssp HHTTT-CSEEE-EECSS-HHHHHHHHHHC-SSCEEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCCEEEESCC
T ss_pred HHHhh-CCEEE-EecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhCCccccccccCCcEEEEeCCC
Confidence 44567 55433 44443 35556667764 689998 65 3444567777777777777 37999999999998
Q ss_pred hHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcc---c---CCCCCHHHHHhccCCcE
Q 007112 367 EAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE---H---APIKSLLDAVKAIKPTM 440 (617)
Q Consensus 367 sAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~---~---~~~~~L~eaV~~vkPtv 440 (617)
.- .+|+-++.++.+ .|+ +|.++-.+|+..+-. +.+...-+.+|.. . ....++.|+|+. .||
T Consensus 171 ~~--~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~p~-~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~--aDv 237 (328)
T 3grf_A 171 MN--NVTYDLMRGCAL-LGM-------ECHVCCPDHKDFKPI-KEVIDECEEIIAKHGTGGSIKIFHDCKKGCEG--VDV 237 (328)
T ss_dssp SS--HHHHHHHHHHHH-HTC-------EEEEECCSSGGGSCC-HHHHHHHHHHHHHHTCCCEEEEESSHHHHHTT--CSE
T ss_pred Cc--chHHHHHHHHHH-cCC-------EEEEECChHhhhCCC-HHHHHHHHHHHhhccCCCeEEEEcCHHHHhcC--CCE
Confidence 52 588888887766 474 699999998863211 1122222333322 1 123689999998 999
Q ss_pred EEe
Q 007112 441 LMG 443 (617)
Q Consensus 441 LIG 443 (617)
+.-
T Consensus 238 vyt 240 (328)
T 3grf_A 238 VYT 240 (328)
T ss_dssp EEE
T ss_pred EEe
Confidence 984
No 381
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=51.93 E-value=12 Score=38.96 Aligned_cols=36 Identities=17% Similarity=0.267 Sum_probs=27.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
..+|||+|||.||+..|..|.+. +- ..++.++|+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~V~vie~~~ 38 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRL-----KP-----EWDVKVFEATE 38 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHh-----Cc-----CCCEEEEECCC
Confidence 46899999999999999988653 11 14688888765
No 382
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=51.90 E-value=29 Score=33.39 Aligned_cols=36 Identities=22% Similarity=0.241 Sum_probs=23.7
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 355 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 355 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+++.++||.||+. ||...++..+.+ .|. +++++|++
T Consensus 30 l~~k~vlVTGasg---gIG~~la~~l~~-~G~-------~V~~~~r~ 65 (279)
T 1xg5_A 30 WRDRLALVTGASG---GIGAAVARALVQ-QGL-------KVVGCART 65 (279)
T ss_dssp GTTCEEEEESTTS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred cCCCEEEEECCCc---hHHHHHHHHHHH-CCC-------EEEEEECC
Confidence 6778999999753 444555555554 363 58888774
No 383
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=51.84 E-value=16 Score=34.99 Aligned_cols=77 Identities=18% Similarity=0.191 Sum_probs=42.2
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhch------hhhc-ccCCC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKK------PWAH-EHAPI 426 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~------~fA~-~~~~~ 426 (617)
+|++.++||.||+. ||...++..+.+ .| -+++++|++- . .+..... .+.. |..+.
T Consensus 9 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~D~~d~ 70 (263)
T 3ak4_A 9 DLSGRKAIVTGGSK---GIGAAIARALDK-AG-------ATVAIADLDV----M---AAQAVVAGLENGGFAVEVDVTKR 70 (263)
T ss_dssp CCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH----H---HHHHHHHTCTTCCEEEECCTTCH
T ss_pred CCCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEeCCH----H---HHHHHHHHHhcCCeEEEEeCCCH
Confidence 47788999999753 444555555554 36 3588887751 1 1111111 0111 11122
Q ss_pred CCHHHHHhcc-----CCcEEEeecCCC
Q 007112 427 KSLLDAVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 427 ~~L~eaV~~v-----kPtvLIG~S~~~ 448 (617)
.++.++++.+ ++|+||=..+..
T Consensus 71 ~~v~~~~~~~~~~~g~iD~lv~~Ag~~ 97 (263)
T 3ak4_A 71 ASVDAAMQKAIDALGGFDLLCANAGVS 97 (263)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 3455666644 799999877654
No 384
>2x8r_A Glycosyl hydrolase; peptidoglycan cleavage, endo-N-acetylmuramidases, motif; 1.70A {Aspergillus fumigatus}
Probab=51.80 E-value=23 Score=33.92 Aligned_cols=64 Identities=14% Similarity=0.211 Sum_probs=43.2
Q ss_pred hhHHHHhhhc-CCCC-CceeeEEeecCCCccccccCcccccccccCCChhhHHHHHHHHHHHHHHhcCCCeeeee
Q 007112 235 GKLSLYTALG-GLRP-SACLPITIDVGTNNEQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQNYGEKVLIQF 307 (617)
Q Consensus 235 GKl~LYta~g-GI~P-~~~LPI~LDvGTnNe~LL~DplYlG~r~~R~~g~eY~~fidefv~av~~~fGp~~lIqf 307 (617)
..+.-|.... +..+ ...||++||+-.+.. |-+...++.++..+.+..|++.|++++|-+.+|--
T Consensus 73 ~qA~~f~~~~~~~~~~~~~lp~~lD~E~~~~---------~~~~~~~~~~~~~~~~~~f~~~v~~~~G~~p~iYt 138 (210)
T 2x8r_A 73 TQAKFFLKNGGGWSDDNRTLPGMLDIEYNPY---------GATCYGLSHSQMVAWIHDFVNEYHHATSRWPMIYT 138 (210)
T ss_dssp HHHHHHHTTTCCCCSSSSBCCCEEECCCCTT---------SCGGGGCCHHHHHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred HHHHHHHHHhcccCCCCCccceEEeeeccCC---------cccccCCCHHHHHHHHHHHHHHHHHHHCCccEEEc
Confidence 3444444443 3322 348999999975421 11223456788999999999999999988888853
No 385
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=51.75 E-value=33 Score=32.90 Aligned_cols=77 Identities=16% Similarity=0.145 Sum_probs=43.9
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc----------cc
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH----------EH 423 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~----------~~ 423 (617)
+++++++||.||++ ||...++..+.+ .| -+++++|++ . +.+...+..+.. |-
T Consensus 4 ~~~~k~vlVTGas~---GIG~aia~~l~~-~G-------~~V~~~~r~----~---~~~~~~~~~~~~~~~~~~~~~~Dv 65 (252)
T 3h7a_A 4 TPRNATVAVIGAGD---YIGAEIAKKFAA-EG-------FTVFAGRRN----G---EKLAPLVAEIEAAGGRIVARSLDA 65 (252)
T ss_dssp -CCSCEEEEECCSS---HHHHHHHHHHHH-TT-------CEEEEEESS----G---GGGHHHHHHHHHTTCEEEEEECCT
T ss_pred CCCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEeCC----H---HHHHHHHHHHHhcCCeEEEEECcC
Confidence 57788999999874 455556665555 36 368888874 1 123322222211 11
Q ss_pred CCCCCHHHHHhcc----CCcEEEeecCCC
Q 007112 424 APIKSLLDAVKAI----KPTMLMGTSGVG 448 (617)
Q Consensus 424 ~~~~~L~eaV~~v----kPtvLIG~S~~~ 448 (617)
.+..++.++++.+ ++|+||=..+..
T Consensus 66 ~~~~~v~~~~~~~~~~g~id~lv~nAg~~ 94 (252)
T 3h7a_A 66 RNEDEVTAFLNAADAHAPLEVTIFNVGAN 94 (252)
T ss_dssp TCHHHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred CCHHHHHHHHHHHHhhCCceEEEECCCcC
Confidence 1123455555554 789999776654
No 386
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=51.66 E-value=15 Score=39.08 Aligned_cols=32 Identities=25% Similarity=0.281 Sum_probs=26.4
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVD 399 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD 399 (617)
+.+++|+|||.||+..|..+.+. .| .++.++|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATL----YG-------KRVAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHh----cC-------CeEEEEe
Confidence 46899999999999999988761 15 4689999
No 387
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=51.63 E-value=7.9 Score=39.08 Aligned_cols=93 Identities=14% Similarity=0.100 Sum_probs=50.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 437 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 437 (617)
.||.|+|+|..|...++.+.. +..+. +-+.++|++ . +......+.|--......++.|+++.-+
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~---~~~~~------~l~av~d~~----~---~~~~~~~~~~g~~~~~~~~~~~ll~~~~ 66 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITN---KLSGA------EIVAVTDVN----Q---EAAQKVVEQYQLNATVYPNDDSLLADEN 66 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHH---TCSSE------EEEEEECSS----H---HHHHHHHHHTTCCCEEESSHHHHHHCTT
T ss_pred EEEEEECccHHHHHHHHHHHh---hCCCc------EEEEEEcCC----H---HHHHHHHHHhCCCCeeeCCHHHHhcCCC
Confidence 489999999988766655542 11121 223456653 1 1122222222100122478999999888
Q ss_pred CcEEEeecCCCCCCCHHHHHHHHcCCCCcEEE
Q 007112 438 PTMLMGTSGVGKTFTKEVVEAMASFNEKPVIF 469 (617)
Q Consensus 438 PtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 469 (617)
+|+++ +++.+ ....++++...+.. ++|+.
T Consensus 67 ~D~V~-i~tp~-~~h~~~~~~al~~G-k~vl~ 95 (344)
T 3mz0_A 67 VDAVL-VTSWG-PAHESSVLKAIKAQ-KYVFC 95 (344)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHTT-CEEEE
T ss_pred CCEEE-ECCCc-hhHHHHHHHHHHCC-CcEEE
Confidence 89888 44433 45566665544333 45443
No 388
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=51.50 E-value=41 Score=33.49 Aligned_cols=55 Identities=20% Similarity=0.238 Sum_probs=31.6
Q ss_pred cchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc
Q 007112 334 QGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 400 (617)
Q Consensus 334 QGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~ 400 (617)
++...-.++..+.+.+..+ .-.++++++.|||..|...+.++ .+ .|. +.+..+|+
T Consensus 139 ~aa~l~~~~~~~~~~~~~~-~~~g~~VlV~GaG~vG~~aiq~a-k~----~G~------~~vi~~~~ 193 (346)
T 4a2c_A 139 DGAFIEPITVGLHAFHLAQ-GCENKNVIIIGAGTIGLLAIQCA-VA----LGA------KSVTAIDI 193 (346)
T ss_dssp GGGGHHHHHHHHHHHHHTT-CCTTSEEEEECCSHHHHHHHHHH-HH----TTC------SEEEEEES
T ss_pred HHHhchHHHHHHHHHHHhc-cCCCCEEEEECCCCcchHHHHHH-HH----cCC------cEEEEEec
Confidence 4443333444444444443 34678999999998776544333 32 364 56776765
No 389
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=51.31 E-value=12 Score=37.41 Aligned_cols=89 Identities=15% Similarity=0.204 Sum_probs=50.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 437 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 437 (617)
.||.|+|+|..|...++.+.. ..+. +-+.++|++ . +......+.|- .+ ..++.|+++.-+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~----~~~~------~l~av~d~~----~---~~~~~~~~~~~--~~-~~~~~~~l~~~~ 63 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSG----NADA------RLVAVADAF----P---AAAEAIAGAYG--CE-VRTIDAIEAAAD 63 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHH----CTTE------EEEEEECSS----H---HHHHHHHHHTT--CE-ECCHHHHHHCTT
T ss_pred eEEEEECCCHHHHHHHHHHhh----CCCc------EEEEEECCC----H---HHHHHHHHHhC--CC-cCCHHHHhcCCC
Confidence 589999999988776665533 1121 223366663 1 11222222221 12 678999999777
Q ss_pred CcEEEeecCCCCCCCHHHHHHHHcCCCCcEEE
Q 007112 438 PTMLMGTSGVGKTFTKEVVEAMASFNEKPVIF 469 (617)
Q Consensus 438 PtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 469 (617)
+|+++ +++.+ ....++++...+. .++|+.
T Consensus 64 ~D~V~-i~tp~-~~h~~~~~~al~~-gk~v~~ 92 (331)
T 4hkt_A 64 IDAVV-ICTPT-DTHADLIERFARA-GKAIFC 92 (331)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred CCEEE-EeCCc-hhHHHHHHHHHHc-CCcEEE
Confidence 89887 45544 4555555544332 345553
No 390
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=51.22 E-value=9.9 Score=39.24 Aligned_cols=152 Identities=15% Similarity=0.183 Sum_probs=76.4
Q ss_pred CCcccccccccccHHHHHhcCCCCCeeEEEEecCceeecCCCCCCCcccchhhhHHHHhhhcCCCCCceeeEEeecCCCc
Q 007112 183 PQGLYISLKEKGKILEVLKNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGLRPSACLPITIDVGTNN 262 (617)
Q Consensus 183 p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnN 262 (617)
|||--++--|-|+ |--.+..++.+|||.+.=| |.--+.= =||. .+|+.+-+| +
T Consensus 16 ~~~~~~~~~~~~~------~~~~~~Mki~IvTDSt~dL------------~~e~~~~----~~I~---vvPL~v~~~--~ 68 (315)
T 3fys_A 16 PRGSHMASMTGGQ------QMGRGSMNIAVVTDSTAYI------------PKEMREQ----HQIH---MIPLQVVFR--E 68 (315)
T ss_dssp ------------------------CCCEEEEEEGGGCC------------CHHHHHH----HTEE---EECCEEECS--S
T ss_pred cCccccccccchh------hhCcCCCcEEEEEECCCCC------------CHHHHHh----CCeE---EEeEEEEEC--C
Confidence 6665555545443 3333345799999987533 2221111 2577 899888875 3
Q ss_pred cccccCcccccccccCCChhhHHHHHHHHHHHHHH--hcCCCeeeeeecCCCCcHHHHHHHHc---CC---CceeecCcc
Q 007112 263 EQLLNDEFYIGLRQKRATGQEYAELLQEFMTAVKQ--NYGEKVLIQFEDFANHNAFELLSKYS---SS---HLVFNDDIQ 334 (617)
Q Consensus 263 e~LL~DplYlG~r~~R~~g~eY~~fidefv~av~~--~fGp~~lIqfEDf~~~~Af~lL~ryr---~~---~~~FNDDiQ 334 (617)
+...++.- ++ .+||.+.++. .. |+ =+.|+--++++-|+ ++ +.+++
T Consensus 69 ~~Y~D~~d--------i~-------~~efy~~m~~~~~~-p~-------TSqPs~~~~~~~fe~l~~~~~~Ii~I~---- 121 (315)
T 3fys_A 69 ETYREEIE--------LD-------WKSFYEEVKKHNEL-PT-------TSQPPIGELVALYEELGKSYDAVISIH---- 121 (315)
T ss_dssp CEEEBTTT--------BC-------HHHHHHHHHTTTCC-CE-------EECCCHHHHHHHHHHHTTTCSEEEEEE----
T ss_pred EEEECCCC--------CC-------HHHHHHHHHhCCCC-cc-------cCCCCHHHHHHHHHHHHhcCCcEEEEe----
Confidence 43333210 11 3666666654 22 21 23344444444443 22 22222
Q ss_pred chhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHH--HHhccCC-CHHhh
Q 007112 335 GTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALE--MSKQTKA-PIEEA 391 (617)
Q Consensus 335 GTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~--~~~~~G~-s~eeA 391 (617)
=+-.|.|-.++.+.....+.+.+|-++=..+++.|..-++..+ |.+ +|. |.||.
T Consensus 122 --iSS~LSGTy~sA~~Aa~~~~~~~I~ViDS~~~s~g~g~lv~~Aa~l~~-~G~~s~eeI 178 (315)
T 3fys_A 122 --LSSGISGTFSSAAAADSMVDNIDVYPFDSEISCLAQGFYALKAAELIK-NGASSPEDI 178 (315)
T ss_dssp --SCTTTCSHHHHHHHGGGGCSSCEEEEEECSSCHHHHHHHHHHHHHHHH-TTCCCHHHH
T ss_pred --CCCcHhHHHHHHHHHHHhCCCCCEEEECCchhHHHHHHHHHHHHHHHH-cCCCCHHHH
Confidence 1223444556666666667778999999998888888777665 344 699 98874
No 391
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=51.21 E-value=15 Score=37.61 Aligned_cols=33 Identities=18% Similarity=0.342 Sum_probs=26.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCc
Q 007112 359 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 403 (617)
Q Consensus 359 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GL 403 (617)
+|+|+|||.+|+..|-.|.+. | .++.++|+..-
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~~~ 34 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN-----G-------HEIIVLEKSAM 34 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----T-------CEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCCCC
Confidence 699999999999999888652 5 46888887643
No 392
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=51.20 E-value=12 Score=39.63 Aligned_cols=35 Identities=29% Similarity=0.415 Sum_probs=28.6
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
.+.+|+|+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAAS-----YG-------AKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TS-------CCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHH-----CC-------CcEEEEeCCC
Confidence 45689999999999999998865 25 4699999863
No 393
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=51.09 E-value=12 Score=40.82 Aligned_cols=35 Identities=14% Similarity=0.161 Sum_probs=28.7
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 54 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAAS 54 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 35789999999999999998865 353 689999864
No 394
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=51.05 E-value=14 Score=37.36 Aligned_cols=32 Identities=16% Similarity=0.181 Sum_probs=26.1
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 359 TFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 359 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
+|+|+|||.+|+..|-.|.+. | .++.++++..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA-----G-------HEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhC-----C-------CceEEEeCCC
Confidence 699999999999999888652 5 4688888764
No 395
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=51.04 E-value=28 Score=33.65 Aligned_cols=77 Identities=18% Similarity=0.256 Sum_probs=43.8
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhh-----------cc
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA-----------HE 422 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA-----------~~ 422 (617)
+|+++++||.||++ ||...++..+.+ .|. +++++|++ . +.+........ -|
T Consensus 17 ~l~~k~vlVTGas~---gIG~aia~~l~~-~G~-------~V~~~~r~----~---~~~~~~~~~l~~~~~~~~~~~~~D 78 (266)
T 4egf_A 17 RLDGKRALITGATK---GIGADIARAFAA-AGA-------RLVLSGRD----V---SELDAARRALGEQFGTDVHTVAID 78 (266)
T ss_dssp CCTTCEEEETTTTS---HHHHHHHHHHHH-TTC-------EEEEEESC----H---HHHHHHHHHHHHHHCCCEEEEECC
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CCC-------EEEEEeCC----H---HHHHHHHHHHHHhcCCcEEEEEec
Confidence 47789999999754 444455555554 363 58888874 1 11222111111 12
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEeecCCC
Q 007112 423 HAPIKSLLDAVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 423 ~~~~~~L~eaV~~v-----kPtvLIG~S~~~ 448 (617)
-.+..++.++++.+ +.|+||=..+..
T Consensus 79 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 109 (266)
T 4egf_A 79 LAEPDAPAELARRAAEAFGGLDVLVNNAGIS 109 (266)
T ss_dssp TTSTTHHHHHHHHHHHHHTSCSEEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 22334566666655 799999777654
No 396
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=50.96 E-value=11 Score=36.11 Aligned_cols=33 Identities=15% Similarity=0.125 Sum_probs=25.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEE-EccC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWL-VDSK 401 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~l-vD~~ 401 (617)
..+|||+|||.||+..|..+.+. |. ++.+ +|+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~e~~ 37 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG-----GL-------KNVVMFEKG 37 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----TC-------SCEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CeEEEEeCC
Confidence 35899999999999999988653 53 4566 8873
No 397
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=50.87 E-value=23 Score=35.80 Aligned_cols=50 Identities=20% Similarity=0.133 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 340 VLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 340 ~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.++..+.|++..+. -.+++++|+|||..|...+.+... .|. ++++.+|+.
T Consensus 156 ~~~ta~~al~~~~~-~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~ 205 (356)
T 1pl8_A 156 PLSVGIHACRRGGV-TLGHKVLVCGAGPIGMVTLLVAKA-----MGA------AQVVVTDLS 205 (356)
T ss_dssp HHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred hHHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC
Confidence 34444556654443 356899999999777666554432 363 578888753
No 398
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=50.65 E-value=39 Score=33.84 Aligned_cols=79 Identities=16% Similarity=0.333 Sum_probs=51.7
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccC
Q 007112 359 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 437 (617)
Q Consensus 359 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 437 (617)
||+|.|| |-.|-.+++.|++. |. -+++.+|+. .+..+|.++++.
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~-----g~------~~v~~~d~~----------------------~d~~~l~~~~~~-- 46 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTST-----TD------HHIFEVHRQ----------------------TKEEELESALLK-- 46 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH-----CC------CEEEECCTT----------------------CCHHHHHHHHHH--
T ss_pred EEEEECCCCHHHHHHHHHHHhC-----CC------CEEEEECCC----------------------CCHHHHHHHhcc--
Confidence 7999995 88888888877653 42 257777664 112346677775
Q ss_pred CcEEEeecCCCCC------------CCHHHHHHHHcCCCC-cEEEecC
Q 007112 438 PTMLMGTSGVGKT------------FTKEVVEAMASFNEK-PVIFALS 472 (617)
Q Consensus 438 PtvLIG~S~~~g~------------Fteevv~~Ma~~~er-PIIFaLS 472 (617)
+|++|=+.+.... .+..+++++.+..-+ .+||.=|
T Consensus 47 ~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss 94 (369)
T 3st7_A 47 ADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSS 94 (369)
T ss_dssp CSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred CCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCc
Confidence 8999976654321 246788888776555 6777544
No 399
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=50.59 E-value=12 Score=36.80 Aligned_cols=101 Identities=17% Similarity=0.139 Sum_probs=57.7
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcc-cCCchhch----------hhhc-ccC
Q 007112 358 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRK-ESLQHFKK----------PWAH-EHA 424 (617)
Q Consensus 358 ~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~-~~L~~~k~----------~fA~-~~~ 424 (617)
.+|+|.|| |-.|..+++.|++ .| .+++.+|+.-- ..|. ....+... .+.. +..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~--~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~ 68 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLE-----AG-------YLPVVIDNFHN--AFRGGGSLPESLRRVQELTGRSVEFEEMDIL 68 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSS--SCBCSSSSBHHHHHHHHHHTCCCEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEecCCc--ccccccccHHHHHHHHhccCCceEEEECCCC
Confidence 58999986 7777777777754 25 35888876411 0010 00111111 1111 111
Q ss_pred CCCCHHHHHhccCCcEEEeecCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007112 425 PIKSLLDAVKAIKPTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 425 ~~~~L~eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 472 (617)
+..++.++++..++|++|=+.+.... -|..++++|.+..-+.|||.=|
T Consensus 69 ~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 132 (348)
T 1ek6_A 69 DQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSS 132 (348)
T ss_dssp CHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 12357778876679999988875421 1456778887766667888544
No 400
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=50.55 E-value=14 Score=38.81 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
+.++||+|||.||+..|..+.+ .| .++.++|+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ-----LG-------MKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 3579999999999999977754 25 3689999873
No 401
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=50.54 E-value=14 Score=38.27 Aligned_cols=35 Identities=20% Similarity=0.262 Sum_probs=27.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
++|||+|||.||+..|..|.+. - .| .++.++|+.-
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~-~--~g-------~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL-M--PD-------LKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-C--TT-------CEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcC-C--CC-------CeEEEECCCC
Confidence 5899999999999999988762 1 12 4688888754
No 402
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=50.51 E-value=35 Score=32.86 Aligned_cols=77 Identities=19% Similarity=0.268 Sum_probs=40.9
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHH
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDA 432 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~ea 432 (617)
.+++++++||.||+. ||...++..+.+ .| -+++++|++. + .+... ..+.-|..+..++.++
T Consensus 17 ~~l~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~----~---~~~~~-~~~~~Dl~d~~~v~~~ 77 (253)
T 2nm0_A 17 RSHMSRSVLVTGGNR---GIGLAIARAFAD-AG-------DKVAITYRSG----E---PPEGF-LAVKCDITDTEQVEQA 77 (253)
T ss_dssp ---CCCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESSS----C---CCTTS-EEEECCTTSHHHHHHH
T ss_pred cCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----H---hhccc-eEEEecCCCHHHHHHH
Confidence 356778999999754 455556666555 36 3688888752 1 12210 0111121222345555
Q ss_pred Hhcc-----CCcEEEeecCCC
Q 007112 433 VKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 433 V~~v-----kPtvLIG~S~~~ 448 (617)
++.+ ++|+||=..+..
T Consensus 78 ~~~~~~~~g~iD~lv~nAg~~ 98 (253)
T 2nm0_A 78 YKEIEETHGPVEVLIANAGVT 98 (253)
T ss_dssp HHHHHHHTCSCSEEEEECSCC
T ss_pred HHHHHHHcCCCCEEEECCCCC
Confidence 5544 589999777653
No 403
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=50.50 E-value=30 Score=34.83 Aligned_cols=56 Identities=16% Similarity=0.186 Sum_probs=35.1
Q ss_pred chhHHHHHHHHHHHHHhCCCCCC--ceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 335 GTASVVLAGILSALKLVGGTLAD--QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 335 GTaaV~LAgll~Alr~~g~~l~d--~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
++-.+.++..+.|+...+..-.+ ++++|.|| |..|..++.++.. .|. ++++.+|+.
T Consensus 137 a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~~ 195 (357)
T 2zb4_A 137 GAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICGT 195 (357)
T ss_dssp TTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeCC
Confidence 33334455555666333443456 89999998 8777777666543 363 478888874
No 404
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=50.47 E-value=12 Score=38.67 Aligned_cols=39 Identities=13% Similarity=0.219 Sum_probs=28.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhc-CeEEEEccCCc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEAR-KKIWLVDSKGL 403 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr-~~i~lvD~~GL 403 (617)
...|||+|||.||+..|..+.+. |. +.. -++.++|+..-
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~-----g~---~~~~~~v~liE~~~~ 69 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQER-----AQ---AQGALEVLFLDKQGD 69 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHH-----HH---HHCCCCEEEEESCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhc-----cc---ccCcccEEEEecCCC
Confidence 35799999999999999998764 20 000 46889988753
No 405
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=50.45 E-value=12 Score=39.29 Aligned_cols=35 Identities=23% Similarity=0.314 Sum_probs=27.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 403 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GL 403 (617)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+..-
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~-----~G~-------~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGK-----RGR-------RVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCCC
Confidence 4689999999999999987764 363 6889998754
No 406
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=50.33 E-value=18 Score=34.53 Aligned_cols=79 Identities=10% Similarity=0.125 Sum_probs=43.5
Q ss_pred CCCCceEEEeCcCh---HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhh--------cc
Q 007112 354 TLADQTFLFLGAGE---AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA--------HE 422 (617)
Q Consensus 354 ~l~d~riv~~GAGs---Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA--------~~ 422 (617)
++++.++||.||+. .|..+|+.+++ .|. +++++|+.. ...+.+......+. -|
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~D 67 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHE-----AGA-------RLIFTYAGE----RLEKSVHELAGTLDRNDSIILPCD 67 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESSG----GGHHHHHHHHHTSSSCCCEEEECC
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHH-----CCC-------EEEEecCch----HHHHHHHHHHHhcCCCCceEEeCC
Confidence 57889999999853 45556665543 363 588888751 11011111111110 12
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEeecCCC
Q 007112 423 HAPIKSLLDAVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 423 ~~~~~~L~eaV~~v-----kPtvLIG~S~~~ 448 (617)
..+..++.++++.+ ++|+||=..+..
T Consensus 68 ~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~ 98 (266)
T 3oig_A 68 VTNDAEIETCFASIKEQVGVIHGIAHCIAFA 98 (266)
T ss_dssp CSSSHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHhCCeeEEEEccccc
Confidence 22223566666655 789999877754
No 407
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=50.30 E-value=11 Score=37.42 Aligned_cols=91 Identities=10% Similarity=0.135 Sum_probs=49.7
Q ss_pred CCCceEEEeCcChHHHH-HHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHH
Q 007112 355 LADQTFLFLGAGEAGTG-IAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAV 433 (617)
Q Consensus 355 l~d~riv~~GAGsAg~G-IA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 433 (617)
++..||.|+|+|..|.. .++.+. +..|. +-+.++|++ . +......+.|- .+...++.|++
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~----~~~~~------~l~av~d~~----~---~~~~~~a~~~~--~~~~~~~~~ll 64 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILT----KSERF------EFVGAFTPN----K---VKREKICSDYR--IMPFDSIESLA 64 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHT----SCSSS------EEEEEECSC----H---HHHHHHHHHHT--CCBCSCHHHHH
T ss_pred cccCcEEEEecCHHHHHHHHHHHH----hCCCe------EEEEEECCC----H---HHHHHHHHHcC--CCCcCCHHHHH
Confidence 34579999999988875 555442 11121 223366653 1 11222222231 12267899999
Q ss_pred hccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEE
Q 007112 434 KAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIF 469 (617)
Q Consensus 434 ~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 469 (617)
+ ++|+++ +++... ...++++...+ ..++++.
T Consensus 65 ~--~~D~V~-i~tp~~-~h~~~~~~al~-~gk~vl~ 95 (308)
T 3uuw_A 65 K--KCDCIF-LHSSTE-THYEIIKILLN-LGVHVYV 95 (308)
T ss_dssp T--TCSEEE-ECCCGG-GHHHHHHHHHH-TTCEEEE
T ss_pred h--cCCEEE-EeCCcH-hHHHHHHHHHH-CCCcEEE
Confidence 8 799988 666553 45555544333 2355553
No 408
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=50.16 E-value=13 Score=36.03 Aligned_cols=32 Identities=22% Similarity=0.291 Sum_probs=24.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
--|+|+|||+||+-.|..+.+ .| .++.++|+.
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~-----~g-------~~V~liE~~ 38 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASR-----AN-------LKTVMIERG 38 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEecC
Confidence 357999999999998877654 35 368888864
No 409
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=50.16 E-value=32 Score=35.05 Aligned_cols=50 Identities=16% Similarity=0.187 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 340 VLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 340 ~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+....+.|++..+....+++++|.|||..|..++.++.. .| | +++.+|+.
T Consensus 171 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~-----~G-----a--~Vi~~~~~ 220 (366)
T 1yqd_A 171 AGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKA-----FG-----S--KVTVISTS 220 (366)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TT-----C--EEEEEESC
T ss_pred hHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHH-----CC-----C--EEEEEeCC
Confidence 334445667666655478999999999877776655532 35 2 57777753
No 410
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=50.09 E-value=57 Score=31.76 Aligned_cols=76 Identities=17% Similarity=0.176 Sum_probs=42.9
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhh----------ccc
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA----------HEH 423 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA----------~~~ 423 (617)
+|+++++||.||++ ||...++..+.+ .| -+++++|++ .+ .+........ -|.
T Consensus 30 ~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~----~~---~~~~~~~~~~~~~~~~~~~~~Dv 91 (275)
T 4imr_A 30 GLRGRTALVTGSSR---GIGAAIAEGLAG-AG-------AHVILHGVK----PG---STAAVQQRIIASGGTAQELAGDL 91 (275)
T ss_dssp CCTTCEEEETTCSS---HHHHHHHHHHHH-TT-------CEEEEEESS----TT---TTHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEcCC----HH---HHHHHHHHHHhcCCeEEEEEecC
Confidence 57788999999764 444555555554 36 368888874 11 2222222211 122
Q ss_pred CCCCCHHHHHhcc----CCcEEEeecCC
Q 007112 424 APIKSLLDAVKAI----KPTMLMGTSGV 447 (617)
Q Consensus 424 ~~~~~L~eaV~~v----kPtvLIG~S~~ 447 (617)
.+..++.++++.+ +.|+||=..+.
T Consensus 92 ~~~~~~~~~~~~~~~~g~iD~lvnnAg~ 119 (275)
T 4imr_A 92 SEAGAGTDLIERAEAIAPVDILVINASA 119 (275)
T ss_dssp TSTTHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 2233455555544 79999977664
No 411
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=50.07 E-value=7.1 Score=42.08 Aligned_cols=32 Identities=19% Similarity=0.345 Sum_probs=25.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.||||+|+|.||+-.|+.|.. .+ -+|.|+|++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~-----~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDT-----KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCT-----TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhh-----CC-------CcEEEECCC
Confidence 489999999999988876631 12 369999985
No 412
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=50.05 E-value=13 Score=39.90 Aligned_cols=35 Identities=20% Similarity=0.260 Sum_probs=28.6
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
.+.+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~-----G-------~~V~liE~~~ 76 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM-----G-------GRQLIVDRWP 76 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeCCC
Confidence 357899999999999999888653 5 3689999875
No 413
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=50.02 E-value=13 Score=36.56 Aligned_cols=79 Identities=15% Similarity=0.216 Sum_probs=40.5
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhh-----------
Q 007112 352 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA----------- 420 (617)
Q Consensus 352 g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA----------- 420 (617)
..+++++++||.||++ ||...++..+.+ .| -+++++|++- + .+......+.
T Consensus 28 ~~~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~~~~ 89 (281)
T 4dry_A 28 KGSGEGRIALVTGGGT---GVGRGIAQALSA-EG-------YSVVITGRRP----D---VLDAAAGEIGGRTGNIVRAVV 89 (281)
T ss_dssp ------CEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH----H---HHHHHHHHHHHHHSSCEEEEE
T ss_pred CCCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEECCH----H---HHHHHHHHHHhcCCCeEEEEE
Confidence 3468889999999754 444455555544 36 3688888741 1 1222111111
Q ss_pred cccCCCCCHHHHHhcc-----CCcEEEeecCCC
Q 007112 421 HEHAPIKSLLDAVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 421 ~~~~~~~~L~eaV~~v-----kPtvLIG~S~~~ 448 (617)
-|..+..++.++++.+ ++|+||=..+..
T Consensus 90 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~ 122 (281)
T 4dry_A 90 CDVGDPDQVAALFAAVRAEFARLDLLVNNAGSN 122 (281)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 1112223455666655 799999877754
No 414
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=49.92 E-value=12 Score=38.25 Aligned_cols=96 Identities=16% Similarity=0.116 Sum_probs=52.4
Q ss_pred CCCceEEEeC-cChHHHH-HH----HHHHHHHHhccCCCHHhhcCe----EEEEccCCcccCCcccCCchhchhhhccc-
Q 007112 355 LADQTFLFLG-AGEAGTG-IA----ELIALEMSKQTKAPIEEARKK----IWLVDSKGLIVSSRKESLQHFKKPWAHEH- 423 (617)
Q Consensus 355 l~d~riv~~G-AGsAg~G-IA----~li~~~~~~~~G~s~eeAr~~----i~lvD~~GLi~~~R~~~L~~~k~~fA~~~- 423 (617)
.+.-||.++| +|..|.+ .+ +.+... .++.... ... +.++|++ . + ..+.+|...
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~----~~~~l~~-~~~~~~~~av~~~~----~---~----~a~~~a~~~~ 67 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQ----GGVRLKN-GDRIMPDPILVGRS----A---E----KVEALAKRFN 67 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHH----TSEECTT-SCEEEEEEEEECSS----S---H----HHHHHHHHTT
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhc----CceeecC-CcccceeeEEEcCC----H---H----HHHHHHHHhC
Confidence 3456899999 9999987 66 444322 2221000 011 1244442 1 1 112344321
Q ss_pred -C-CCCCHHHHHhccCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEE
Q 007112 424 -A-PIKSLLDAVKAIKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIF 469 (617)
Q Consensus 424 -~-~~~~L~eaV~~vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 469 (617)
+ -..++.|.++.-++|+++ +.+.. .+..+++++..+. .++|+.
T Consensus 68 ~~~~~~~~~~ll~~~~iD~V~-i~tp~-~~h~~~~~~al~~-Gk~V~~ 112 (383)
T 3oqb_A 68 IARWTTDLDAALADKNDTMFF-DAATT-QARPGLLTQAINA-GKHVYC 112 (383)
T ss_dssp CCCEESCHHHHHHCSSCCEEE-ECSCS-SSSHHHHHHHHTT-TCEEEE
T ss_pred CCcccCCHHHHhcCCCCCEEE-ECCCc-hHHHHHHHHHHHC-CCeEEE
Confidence 1 237899999998899888 55544 4666665554433 355554
No 415
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=49.87 E-value=59 Score=31.93 Aligned_cols=38 Identities=18% Similarity=0.320 Sum_probs=26.5
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.+|+++++||.||++ ||...++..+.+ .| -+++++|+.
T Consensus 24 ~~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~~~ 61 (299)
T 3t7c_A 24 GKVEGKVAFITGAAR---GQGRSHAITLAR-EG-------ADIIAIDVC 61 (299)
T ss_dssp CTTTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEECC
T ss_pred cccCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEecc
Confidence 468889999999865 444555555554 36 368888876
No 416
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=49.78 E-value=14 Score=39.42 Aligned_cols=34 Identities=21% Similarity=0.426 Sum_probs=27.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
.-.|||+|||.+|+++|..+.+ .|+ ++.++|+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~-----~G~-------~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAG-----RGL-------SVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEECCC
Confidence 4579999999999999998865 364 588999864
No 417
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=49.77 E-value=36 Score=32.88 Aligned_cols=39 Identities=28% Similarity=0.393 Sum_probs=27.1
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
.+|+++++||.||++ ||...++..+.+ .| -+++++|+.+
T Consensus 7 ~~l~~k~~lVTGas~---GIG~a~a~~la~-~G-------~~V~~~~r~~ 45 (277)
T 3tsc_A 7 GKLEGRVAFITGAAR---GQGRAHAVRMAA-EG-------ADIIAVDIAG 45 (277)
T ss_dssp CTTTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEECCS
T ss_pred cccCCCEEEEECCcc---HHHHHHHHHHHH-cC-------CEEEEEeccc
Confidence 468889999999864 444555555555 36 3688999854
No 418
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=49.61 E-value=19 Score=37.30 Aligned_cols=91 Identities=7% Similarity=0.085 Sum_probs=52.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhcc-
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI- 436 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v- 436 (617)
.||.|+|+|..|..+|..+... | .+++++|++ . +.+...+. .......++.|+++..
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~-----G-------~~V~~~dr~----~---~~~~~a~~---~G~~~~~~~~e~~~~a~ 66 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA-----N-------HSVFGYNRS----R---SGAKSAVD---EGFDVSADLEATLQRAA 66 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSC----H---HHHHHHHH---TTCCEESCHHHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CEEEEEeCC----H---HHHHHHHH---cCCeeeCCHHHHHHhcc
Confidence 5899999999999999888653 5 368888864 1 11111110 0011124677776542
Q ss_pred -CCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 007112 437 -KPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 437 -kPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLS 472 (617)
.+|++| ++.... -++++++.++.+.+.-||.=.+
T Consensus 67 ~~aDlVi-lavP~~-~~~~vl~~l~~~~~~~iv~Dv~ 101 (341)
T 3ktd_A 67 AEDALIV-LAVPMT-AIDSLLDAVHTHAPNNGFTDVV 101 (341)
T ss_dssp HTTCEEE-ECSCHH-HHHHHHHHHHHHCTTCCEEECC
T ss_pred cCCCEEE-EeCCHH-HHHHHHHHHHccCCCCEEEEcC
Confidence 467666 444332 4667777766544444554343
No 419
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=49.35 E-value=17 Score=40.55 Aligned_cols=34 Identities=24% Similarity=0.402 Sum_probs=28.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
..+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~-----G-------~~V~liE~~~ 424 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR-----G-------YDVVLAEAGR 424 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----T-------CEEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEecCC
Confidence 46899999999999999988753 5 3699999863
No 420
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=49.32 E-value=30 Score=32.23 Aligned_cols=38 Identities=18% Similarity=0.288 Sum_probs=25.1
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.++++.++||.||+. ||...++..+.+ .| -+++++|++
T Consensus 3 ~~~~~~~vlVtGasg---giG~~la~~l~~-~G-------~~V~~~~r~ 40 (248)
T 2pnf_A 3 IKLQGKVSLVTGSTR---GIGRAIAEKLAS-AG-------STVIITGTS 40 (248)
T ss_dssp CCCTTCEEEETTCSS---HHHHHHHHHHHH-TT-------CEEEEEESS
T ss_pred cccCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 357788999999853 455555555554 36 368888774
No 421
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=49.27 E-value=39 Score=32.45 Aligned_cols=38 Identities=21% Similarity=0.302 Sum_probs=26.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
+|+++++||.||++ ||...|+..+.+ .| -+++++|+..
T Consensus 7 ~l~gk~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~~~~ 44 (287)
T 3pxx_A 7 RVQDKVVLVTGGAR---GQGRSHAVKLAE-EG-------ADIILFDICH 44 (287)
T ss_dssp TTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEECCS
T ss_pred ccCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CeEEEEcccc
Confidence 57889999999864 455555555554 36 3688998763
No 422
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=49.27 E-value=9.5 Score=38.42 Aligned_cols=89 Identities=12% Similarity=0.113 Sum_probs=49.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAIK 437 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~vk 437 (617)
.||.|+|+|..|...++.+.. ..+. +-+.++|++ .. ......+.|- .....++.|+++.-+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~----~~~~------~l~av~d~~----~~---~~~~~a~~~g--~~~~~~~~~~l~~~~ 65 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAA----NPDL------ELVVIADPF----IE---GAQRLAEANG--AEAVASPDEVFARDD 65 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHH----CTTE------EEEEEECSS----HH---HHHHHHHTTT--CEEESSHHHHTTCSC
T ss_pred eEEEEECCcHHHHHHHHHHHh----CCCc------EEEEEECCC----HH---HHHHHHHHcC--CceeCCHHHHhcCCC
Confidence 589999999988776665543 1121 223466653 11 1222222221 122468999999777
Q ss_pred CcEEEeecCCCCCCCHHHHHHHHcCCCCcEE
Q 007112 438 PTMLMGTSGVGKTFTKEVVEAMASFNEKPVI 468 (617)
Q Consensus 438 PtvLIG~S~~~g~Fteevv~~Ma~~~erPII 468 (617)
+|+++ +++.+ ....++++...+.. ++|+
T Consensus 66 ~D~V~-i~tp~-~~h~~~~~~al~~g-k~v~ 93 (344)
T 3euw_A 66 IDGIV-IGSPT-STHVDLITRAVERG-IPAL 93 (344)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHTT-CCEE
T ss_pred CCEEE-EeCCc-hhhHHHHHHHHHcC-CcEE
Confidence 89887 45544 45555555544332 4444
No 423
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=49.24 E-value=14 Score=38.51 Aligned_cols=33 Identities=27% Similarity=0.264 Sum_probs=26.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
-++||+|||.||+..|..+.+. | .++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQL-----G-------MKVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 4799999999999999877542 5 3689999873
No 424
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=49.24 E-value=39 Score=33.63 Aligned_cols=49 Identities=20% Similarity=0.148 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 341 LAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 341 LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
....+.+++..+. -.+++++|+|||+.|.-.+.++..+ .| .+++.+|+.
T Consensus 149 ~~ta~~~l~~~~~-~~g~~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~~ 197 (348)
T 4eez_A 149 GVTTYKAIKVSGV-KPGDWQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDIN 197 (348)
T ss_dssp HHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEESC
T ss_pred eeeEEeeecccCC-CCCCEEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEECc
Confidence 3344566776654 3578999999998886554444322 23 468887763
No 425
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=49.23 E-value=13 Score=38.94 Aligned_cols=33 Identities=27% Similarity=0.227 Sum_probs=26.9
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+.+++|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~-----~G-------~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ-----LG-------LSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCC
Confidence 4579999999999999987754 25 368999986
No 426
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=49.18 E-value=34 Score=34.21 Aligned_cols=101 Identities=14% Similarity=0.190 Sum_probs=56.7
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchh----------chhhhc-ccCC
Q 007112 358 QTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHF----------KKPWAH-EHAP 425 (617)
Q Consensus 358 ~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~----------k~~fA~-~~~~ 425 (617)
.+|+|.|| |-.|..+++.|++ .| .+++++|+..--. ..+.+... +..+.. +..+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d 90 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLE-----KG-------YEVHGIVRRSSSF--NTGRIEHLYKNPQAHIEGNMKLHYGDLTD 90 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCCSSC--CCTTTGGGC---------CEEEEECCTTC
T ss_pred cEEEEECCCchHHHHHHHHHHH-----CC-------CEEEEEECCcccc--chhhHHHHhhhhccccCCCceEEEccCCC
Confidence 57999996 7777777776654 25 3688888752100 00112111 111111 1112
Q ss_pred CCCHHHHHhccCCcEEEeecCCCCC----------------CCHHHHHHHHcCCC---CcEEEecC
Q 007112 426 IKSLLDAVKAIKPTMLMGTSGVGKT----------------FTKEVVEAMASFNE---KPVIFALS 472 (617)
Q Consensus 426 ~~~L~eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~e---rPIIFaLS 472 (617)
..++.++++.+++|++|=+.+.... -|..+++++.+..- +.|||.=|
T Consensus 91 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS 156 (375)
T 1t2a_A 91 STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQAST 156 (375)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE
T ss_pred HHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecc
Confidence 2357788888899999988775431 12346666665543 56787544
No 427
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=49.14 E-value=13 Score=36.41 Aligned_cols=77 Identities=13% Similarity=0.242 Sum_probs=44.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchh------hh-cccCCC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKP------WA-HEHAPI 426 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~------fA-~~~~~~ 426 (617)
+|+++++||.||++ ||...++..+.+ .| -+++++|++- . .+...... +- -|....
T Consensus 13 ~l~gk~vlVTGas~---gIG~~~a~~L~~-~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~Dl~d~ 74 (291)
T 3rd5_A 13 SFAQRTVVITGANS---GLGAVTARELAR-RG-------ATVIMAVRDT----R---KGEAAARTMAGQVEVRELDLQDL 74 (291)
T ss_dssp CCTTCEEEEECCSS---HHHHHHHHHHHH-TT-------CEEEEEESCH----H---HHHHHHTTSSSEEEEEECCTTCH
T ss_pred CCCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEECCH----H---HHHHHHHHhcCCeeEEEcCCCCH
Confidence 57789999999863 444555555554 36 3688888751 1 11111111 11 122222
Q ss_pred CCHHHHHhcc-CCcEEEeecCCC
Q 007112 427 KSLLDAVKAI-KPTMLMGTSGVG 448 (617)
Q Consensus 427 ~~L~eaV~~v-kPtvLIG~S~~~ 448 (617)
.++.++++.+ ++|+||=..+..
T Consensus 75 ~~v~~~~~~~~~iD~lv~nAg~~ 97 (291)
T 3rd5_A 75 SSVRRFADGVSGADVLINNAGIM 97 (291)
T ss_dssp HHHHHHHHTCCCEEEEEECCCCC
T ss_pred HHHHHHHHhcCCCCEEEECCcCC
Confidence 4566777776 789999877754
No 428
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=49.13 E-value=21 Score=38.48 Aligned_cols=107 Identities=24% Similarity=0.276 Sum_probs=58.8
Q ss_pred CceEEEeCcChHHH-HHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhc
Q 007112 357 DQTFLFLGAGEAGT-GIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKA 435 (617)
Q Consensus 357 d~riv~~GAGsAg~-GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~ 435 (617)
-+||.|+|.|-+|+ |+|+++.+ .| -++...|.+ .....+.|.....++-- .. . .+-+.
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~-----~G-------~~V~~~D~~---~~~~~~~l~~~gi~~~~-g~---~-~~~~~- 80 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLAN-----EG-------YQISGSDLA---PNSVTQHLTALGAQIYF-HH---R-PENVL- 80 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHH-----TT-------CEEEEECSS---CCHHHHHHHHTTCEEES-SC---C-GGGGT-
T ss_pred CCEEEEEEEcHhhHHHHHHHHHh-----CC-------CeEEEEECC---CCHHHHHHHHCCCEEEC-CC---C-HHHcC-
Confidence 37999999999999 58888865 36 368888865 11000112111111100 00 1 11233
Q ss_pred cCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccccC-cEEEeeCC
Q 007112 436 IKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIFALSNPTSQSECTAEEAYTWSKG-QAIFASGS 499 (617)
Q Consensus 436 vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wT~G-raifASGS 499 (617)
.+|.+|=.++.+ .=++++.++.. ..-|||= . +|-++.+.++ +.|-.|||
T Consensus 81 -~~d~vV~Spgi~-~~~p~~~~a~~--~gi~v~~-------~----~e~l~~~~~~~~~IaVTGT 130 (494)
T 4hv4_A 81 -DASVVVVSTAIS-ADNPEIVAARE--ARIPVIR-------R----AEMLAELMRYRHGIAVAGT 130 (494)
T ss_dssp -TCSEEEECTTSC-TTCHHHHHHHH--TTCCEEE-------H----HHHHHHHHTTSEEEEEECS
T ss_pred -CCCEEEECCCCC-CCCHHHHHHHH--CCCCEEc-------H----HHHHHHHhcCCCEEEEecC
Confidence 378888555555 45778777765 2346652 1 2334444444 46778887
No 429
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=49.12 E-value=10 Score=40.63 Aligned_cols=23 Identities=26% Similarity=0.348 Sum_probs=19.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHH
Q 007112 358 QTFLFLGAGEAGTGIAELIALEM 380 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~ 380 (617)
+-||++|||.+|+++|-.|.+..
T Consensus 40 ~Dvi~IGaGp~gLa~A~~L~~~~ 62 (501)
T 4b63_A 40 HDLLCVGFGPASLAIAIALHDAL 62 (501)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHH
T ss_pred CcEEEEcccHHHHHHHHHHHhcC
Confidence 35899999999999998887654
No 430
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=49.12 E-value=13 Score=39.30 Aligned_cols=37 Identities=14% Similarity=0.264 Sum_probs=28.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcc
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 404 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi 404 (617)
.+|||+|||.||+..|..+.+.. .| .++.++|+....
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~~ 73 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRND---EN-------ANVVTLEKGEIY 73 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEECSSSCC
T ss_pred ceEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCCC
Confidence 58999999999999999886531 13 479999987544
No 431
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=49.10 E-value=28 Score=32.78 Aligned_cols=70 Identities=13% Similarity=0.192 Sum_probs=39.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhcc-
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI- 436 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v- 436 (617)
+++||.||++ ||...++..+.+ .| -+++++|++- . .+.. .+.-|.....++.++++.+
T Consensus 2 k~vlVTGas~---gIG~~~a~~l~~-~G-------~~V~~~~r~~----~---~~~~---~~~~Dl~~~~~v~~~~~~~~ 60 (257)
T 1fjh_A 2 SIIVISGCAT---GIGAATRKVLEA-AG-------HQIVGIDIRD----A---EVIA---DLSTAEGRKQAIADVLAKCS 60 (257)
T ss_dssp CEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESSS----S---SEEC---CTTSHHHHHHHHHHHHTTCT
T ss_pred CEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCc----h---hhcc---ccccCCCCHHHHHHHHHHhC
Confidence 3688998753 455556555554 36 3588888751 1 1211 0111111123566777765
Q ss_pred -CCcEEEeecCCC
Q 007112 437 -KPTMLMGTSGVG 448 (617)
Q Consensus 437 -kPtvLIG~S~~~ 448 (617)
++|+||=..+..
T Consensus 61 ~~id~lv~~Ag~~ 73 (257)
T 1fjh_A 61 KGMDGLVLCAGLG 73 (257)
T ss_dssp TCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 789999877754
No 432
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=49.04 E-value=30 Score=34.74 Aligned_cols=45 Identities=20% Similarity=0.229 Sum_probs=29.5
Q ss_pred HHHHHHHhCCCCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 344 ILSALKLVGGTLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 344 ll~Alr~~g~~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.+.|++..+ .-.+++++|.|| |..|..+++++.. .| -+++.+|+.
T Consensus 158 a~~~l~~~~-~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~G-------a~V~~~~~~ 203 (347)
T 2hcy_A 158 VYKALKSAN-LMAGHWVAISGAAGGLGSLAVQYAKA-----MG-------YRVLGIDGG 203 (347)
T ss_dssp HHHHHHTTT-CCTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECS
T ss_pred HHHHHHhcC-CCCCCEEEEECCCchHHHHHHHHHHH-----CC-------CcEEEEcCC
Confidence 355565442 335789999999 7777777766543 35 268888753
No 433
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=48.98 E-value=9.5 Score=37.50 Aligned_cols=78 Identities=19% Similarity=0.270 Sum_probs=41.6
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhh------c-ccCC
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA------H-EHAP 425 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA------~-~~~~ 425 (617)
.+|+++++||.||++ ||...|+..+.+ .| -+++++|++. +.+......+. + |..+
T Consensus 25 ~~l~gk~vlVTGas~---gIG~aia~~la~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~d 86 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGA---GIGLAVARRLAD-EG-------CHVLCADIDG-------DAADAAATKIGCGAAACRVDVSD 86 (277)
T ss_dssp --CTTCEEEETTTTS---THHHHHHHHHHH-TT-------CEEEEEESSH-------HHHHHHHHHHCSSCEEEECCTTC
T ss_pred cCCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHcCCcceEEEecCCC
Confidence 357889999999753 344444444444 36 3688888741 11222111110 0 1112
Q ss_pred CCCHHHHHhcc-----CCcEEEeecCCC
Q 007112 426 IKSLLDAVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 426 ~~~L~eaV~~v-----kPtvLIG~S~~~ 448 (617)
..++.++++.+ ++|+||=..+..
T Consensus 87 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 114 (277)
T 3gvc_A 87 EQQIIAMVDACVAAFGGVDKLVANAGVV 114 (277)
T ss_dssp HHHHHHHHHHHHHHHSSCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455556655 799999777654
No 434
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=48.85 E-value=15 Score=35.98 Aligned_cols=77 Identities=17% Similarity=0.272 Sum_probs=40.3
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhh------c-ccCCC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWA------H-EHAPI 426 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA------~-~~~~~ 426 (617)
++.++++||.||++ ||...|+..+.+ .| -+++++|++- +.+......+. . |-.+.
T Consensus 25 ~~~~k~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~d~ 86 (272)
T 4dyv_A 25 KTGKKIAIVTGAGS---GVGRAVAVALAG-AG-------YGVALAGRRL-------DALQETAAEIGDDALCVPTDVTDP 86 (272)
T ss_dssp ---CCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHHHTSCCEEEECCTTSH
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEECCH-------HHHHHHHHHhCCCeEEEEecCCCH
Confidence 35678889999753 344445555444 36 3588888741 11222211111 0 11122
Q ss_pred CCHHHHHhcc-----CCcEEEeecCCC
Q 007112 427 KSLLDAVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 427 ~~L~eaV~~v-----kPtvLIG~S~~~ 448 (617)
.++.++++.+ ++|+||=..+..
T Consensus 87 ~~v~~~~~~~~~~~g~iD~lVnnAg~~ 113 (272)
T 4dyv_A 87 DSVRALFTATVEKFGRVDVLFNNAGTG 113 (272)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3455666655 799999877764
No 435
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=48.75 E-value=52 Score=31.24 Aligned_cols=39 Identities=18% Similarity=0.262 Sum_probs=25.7
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 352 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 352 g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
..+|++.++||.||+. ||...++..+.+ .| -+++++|++
T Consensus 9 ~~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 47 (260)
T 2zat_A 9 RKPLENKVALVTASTD---GIGLAIARRLAQ-DG-------AHVVVSSRK 47 (260)
T ss_dssp -CTTTTCEEEESSCSS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred ccCCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 3568889999999754 444555555554 36 368888874
No 436
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=48.73 E-value=14 Score=38.72 Aligned_cols=34 Identities=21% Similarity=0.158 Sum_probs=27.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
+.++||+|||.||+..|..+.+. | .++.++|+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 39 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQL-----G-------FKTVCIEKNE 39 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEeCCC
Confidence 35799999999999999888642 5 3689999874
No 437
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=48.63 E-value=13 Score=39.68 Aligned_cols=38 Identities=21% Similarity=0.358 Sum_probs=29.4
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCc
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 403 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GL 403 (617)
...+|||+|||.||+..|..|.+. +. ..+|.++|+..-
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~-----~~-----g~~V~lie~~~~ 47 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRAR-----DP-----GARVLIVSEDPE 47 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHH-----ST-----TCEEEEEESSSS
T ss_pred CcCCEEEECChHHHHHHHHHHHhc-----CC-----CCeEEEEeCCCC
Confidence 356899999999999999988653 11 257999998743
No 438
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=48.57 E-value=31 Score=33.49 Aligned_cols=38 Identities=21% Similarity=0.290 Sum_probs=26.7
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.+|+++++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 7 ~~l~~k~~lVTGas~---gIG~aia~~la~-~G-------~~V~~~~~~ 44 (286)
T 3uve_A 7 GRVEGKVAFVTGAAR---GQGRSHAVRLAQ-EG-------ADIIAVDIC 44 (286)
T ss_dssp CTTTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEECC
T ss_pred cccCCCEEEEeCCCc---hHHHHHHHHHHH-CC-------CeEEEEecc
Confidence 468889999999864 455555555554 36 368889876
No 439
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=48.55 E-value=97 Score=32.48 Aligned_cols=131 Identities=18% Similarity=0.231 Sum_probs=82.5
Q ss_pred HHHhcCCCeeeeeecCCCCcHHHHHHHHcCCCceee--cCccchhHHHHHHHHHHHHHhCCCCCCceEEEeCcChHHHHH
Q 007112 295 VKQNYGEKVLIQFEDFANHNAFELLSKYSSSHLVFN--DDIQGTASVVLAGILSALKLVGGTLADQTFLFLGAGEAGTGI 372 (617)
Q Consensus 295 v~~~fGp~~lIqfEDf~~~~Af~lL~ryr~~~~~FN--DDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GI 372 (617)
+-.+| .++++ +--+. +.+.+.|.+|- ++||.| || .-=-.=+||=++.-.+..| +|++.||+++|-|. -+
T Consensus 121 vLs~y-~D~Iv-iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~TI~E~~G-~l~glkva~vGD~~---nv 191 (340)
T 4ep1_A 121 VLSHY-IDGIM-IRTFS-HADVEELAKES-SIPVINGLTD-DHHPCQALADLMTIYEETN-TFKGIKLAYVGDGN---NV 191 (340)
T ss_dssp HHHHH-CSEEE-EECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCC---HH
T ss_pred HHHHh-CCEEE-EecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCc---hh
Confidence 34456 55544 44443 35556666665 588998 44 2233456777776666665 59999999999982 37
Q ss_pred HHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcc-c---CCCCCHHHHHhccCCcEEEeecCC
Q 007112 373 AELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHE-H---APIKSLLDAVKAIKPTMLMGTSGV 447 (617)
Q Consensus 373 A~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~-~---~~~~~L~eaV~~vkPtvLIG~S~~ 447 (617)
|+-++.++.+ .|+ +|.++-.+|+.-.. .+-..-+.+|+. + ....++.|||+. .||+.-..=+
T Consensus 192 a~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~---~~~~~~~~~a~~~G~~v~~~~d~~eav~~--aDVvyt~~w~ 257 (340)
T 4ep1_A 192 CHSLLLASAK-VGM-------HMTVATPVGYRPNE---EIVKKALAIAKETGAEIEILHNPELAVNE--ADFIYTDVWM 257 (340)
T ss_dssp HHHHHHHHHH-HTC-------EEEEECCTTCCCCH---HHHHHHHHHHHHHCCCEEEESCHHHHHTT--CSEEEECCC-
T ss_pred HHHHHHHHHH-cCC-------EEEEECCcccCCCH---HHHHHHHHHHHHcCCeEEEECCHHHHhCC--CCEEEecCcc
Confidence 8888777766 474 68899888875421 121122233332 1 123689999998 9999876543
No 440
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=48.53 E-value=17 Score=37.79 Aligned_cols=23 Identities=30% Similarity=0.471 Sum_probs=19.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHH
Q 007112 357 DQTFLFLGAGEAGTGIAELIALE 379 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~ 379 (617)
+--|||+|||-||+..|..|.++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~ 32 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQI 32 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhh
Confidence 35699999999999999988653
No 441
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=48.53 E-value=16 Score=35.42 Aligned_cols=101 Identities=15% Similarity=0.180 Sum_probs=55.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc------ccCCCCCHHH
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH------EHAPIKSLLD 431 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~------~~~~~~~L~e 431 (617)
.||.|+|+|..|..+|..+... | .+++++|++. ++.+.+......... ......+..|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 67 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----G-------NDVTLIDQWP----AHIEAIRKNGLIADFNGEEVVANLPIFSPEE 67 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCH----HHHHHHHHHCEEEEETTEEEEECCCEECGGG
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----C-------CcEEEEECCH----HHHHHHHhCCEEEEeCCCeeEecceeecchh
Confidence 3899999999999999888642 5 3688888752 110001110000000 0000012222
Q ss_pred HHhcc-CCcEEEeecCCCCCCCHHHHHHHHcC-CCCcEEEecCCCCC
Q 007112 432 AVKAI-KPTMLMGTSGVGKTFTKEVVEAMASF-NEKPVIFALSNPTS 476 (617)
Q Consensus 432 aV~~v-kPtvLIG~S~~~g~Fteevv~~Ma~~-~erPIIFaLSNPt~ 476 (617)
+.+.+ +.|++| ++... -..+++++.++.+ .+..+|..++|...
T Consensus 68 ~~~~~~~~d~vi-~~v~~-~~~~~v~~~l~~~l~~~~~iv~~~~g~~ 112 (316)
T 2ew2_A 68 IDHQNEQVDLII-ALTKA-QQLDAMFKAIQPMITEKTYVLCLLNGLG 112 (316)
T ss_dssp CCTTSCCCSEEE-ECSCH-HHHHHHHHHHGGGCCTTCEEEECCSSSC
T ss_pred hcccCCCCCEEE-EEecc-ccHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 22211 378777 33333 2468888888764 34678888998663
No 442
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=48.48 E-value=26 Score=34.37 Aligned_cols=37 Identities=22% Similarity=0.329 Sum_probs=24.6
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+|+++++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 5 ~l~gk~vlVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~ 41 (280)
T 3tox_A 5 RLEGKIAIVTGASS---GIGRAAALLFAR-EG-------AKVVVTARN 41 (280)
T ss_dssp TTTTCEEEESSTTS---HHHHHHHHHHHH-TT-------CEEEECCSC
T ss_pred CCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEECC
Confidence 57888999999854 444455555554 36 358888764
No 443
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=48.31 E-value=30 Score=33.93 Aligned_cols=77 Identities=14% Similarity=0.260 Sum_probs=42.3
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc----------cc
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH----------EH 423 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~----------~~ 423 (617)
++++.++||.||++ ||...++..+.+ .| -+++++|++- +.+......+.. |-
T Consensus 25 ~~~~k~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~Dv 86 (283)
T 3v8b_A 25 NQPSPVALITGAGS---GIGRATALALAA-DG-------VTVGALGRTR-------TEVEEVADEIVGAGGQAIALEADV 86 (283)
T ss_dssp --CCCEEEEESCSS---HHHHHHHHHHHH-TT-------CEEEEEESSH-------HHHHHHHHHHTTTTCCEEEEECCT
T ss_pred CCCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHHHhcCCcEEEEEccC
Confidence 46678999999764 444555555554 36 3688888751 112222222111 11
Q ss_pred CCCCCHHHHHhcc-----CCcEEEeecCCC
Q 007112 424 APIKSLLDAVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 424 ~~~~~L~eaV~~v-----kPtvLIG~S~~~ 448 (617)
.+..++.++++.+ ++|+||=..+..
T Consensus 87 ~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~ 116 (283)
T 3v8b_A 87 SDELQMRNAVRDLVLKFGHLDIVVANAGIN 116 (283)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 1123456666655 799999777754
No 444
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=48.31 E-value=17 Score=37.85 Aligned_cols=37 Identities=22% Similarity=0.302 Sum_probs=29.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 403 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GL 403 (617)
..+|||+|||.||+..|..+.+ .|. ..+|.++|+..-
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~-----~g~-----~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRA-----SGW-----EGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHc-----cCc-----CCCEEEEECCCC
Confidence 4689999999999999998865 354 237999998643
No 445
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=48.26 E-value=22 Score=33.64 Aligned_cols=78 Identities=14% Similarity=0.151 Sum_probs=44.0
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhh------hc-ccCC
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPW------AH-EHAP 425 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~f------A~-~~~~ 425 (617)
.++++.++||.||+. ||...++..+.+ .| -+++++|++- . .+....+.+ .. |...
T Consensus 8 ~~~~~k~vlVTGasg---giG~~~a~~l~~-~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~D~~~ 69 (265)
T 2o23_A 8 RSVKGLVAVITGGAS---GLGLATAERLVG-QG-------ASAVLLDLPN----S---GGEAQAKKLGNNCVFAPADVTS 69 (265)
T ss_dssp CCCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEECTT----S---SHHHHHHHHCTTEEEEECCTTC
T ss_pred cCCCCCEEEEECCCC---hHHHHHHHHHHH-CC-------CEEEEEeCCc----H---hHHHHHHHhCCceEEEEcCCCC
Confidence 467889999999853 455555555554 36 3688888751 1 122211111 00 1112
Q ss_pred CCCHHHHHhcc-----CCcEEEeecCCC
Q 007112 426 IKSLLDAVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 426 ~~~L~eaV~~v-----kPtvLIG~S~~~ 448 (617)
..++.++++.+ ++|+||=..+..
T Consensus 70 ~~~v~~~~~~~~~~~g~id~li~~Ag~~ 97 (265)
T 2o23_A 70 EKDVQTALALAKGKFGRVDVAVNCAGIA 97 (265)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHCCCCCEEEECCccC
Confidence 23466666654 799999777654
No 446
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=48.22 E-value=8.4 Score=37.27 Aligned_cols=34 Identities=26% Similarity=0.323 Sum_probs=26.4
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
...+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAAR-----ANL-------QPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEccC
Confidence 45689999999999999988864 253 57788854
No 447
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=48.18 E-value=19 Score=38.50 Aligned_cols=37 Identities=14% Similarity=0.225 Sum_probs=28.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcc
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 404 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi 404 (617)
.+|||+|||.||+..|..|.+. |- .-+|.++|+..-+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~-----~~-----~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL-----SE-----TAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CS-----SSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhh-----Cc-----CCCEEEEECCCCc
Confidence 4899999999999999988653 21 2478999987543
No 448
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=48.18 E-value=13 Score=38.69 Aligned_cols=32 Identities=28% Similarity=0.284 Sum_probs=26.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.+|||+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQ-----LG-------QKVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 479999999999999987764 25 368999986
No 449
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=48.18 E-value=12 Score=35.79 Aligned_cols=38 Identities=24% Similarity=0.322 Sum_probs=25.3
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.++++.++||.||+. ||...|+..+.+ .| -+++++|++
T Consensus 12 ~~l~~k~vlITGasg---giG~~~a~~l~~-~G-------~~V~~~~r~ 49 (278)
T 2bgk_A 12 NRLQDKVAIITGGAG---GIGETTAKLFVR-YG-------AKVVIADIA 49 (278)
T ss_dssp CTTTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred ccccCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEcCC
Confidence 457889999999753 455555555554 36 358888764
No 450
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=48.15 E-value=46 Score=31.81 Aligned_cols=76 Identities=20% Similarity=0.316 Sum_probs=41.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc----------cc
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH----------EH 423 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~----------~~ 423 (617)
.+++.++||.||++ ||...|+..+.+ .|. +++++|++. +.+......+.. |.
T Consensus 26 ~l~~k~vlITGas~---gIG~~la~~l~~-~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~D~ 87 (262)
T 3rkr_A 26 SLSGQVAVVTGASR---GIGAAIARKLGS-LGA-------RVVLTARDV-------EKLRAVEREIVAAGGEAESHACDL 87 (262)
T ss_dssp TTTTCEEEESSTTS---HHHHHHHHHHHH-TTC-------EEEEEESCH-------HHHHHHHHHHHHTTCEEEEEECCT
T ss_pred ccCCCEEEEECCCC---hHHHHHHHHHHH-CCC-------EEEEEECCH-------HHHHHHHHHHHHhCCceeEEEecC
Confidence 46788999999743 344444444444 363 588888741 112222222211 11
Q ss_pred CCCCCHHHHHhcc-----CCcEEEeecCC
Q 007112 424 APIKSLLDAVKAI-----KPTMLMGTSGV 447 (617)
Q Consensus 424 ~~~~~L~eaV~~v-----kPtvLIG~S~~ 447 (617)
....++.++++.+ ++|+||=..+.
T Consensus 88 ~~~~~v~~~~~~~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 88 SHSDAIAAFATGVLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp TCHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCCc
Confidence 1223455556554 79999987775
No 451
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=48.14 E-value=39 Score=32.57 Aligned_cols=94 Identities=17% Similarity=0.171 Sum_probs=52.8
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhcc
Q 007112 359 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKAI 436 (617)
Q Consensus 359 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~v 436 (617)
||+|.|| |-.|..+++.|++ .| .+++.+|+.. ......+. ....+.. +..+.. +.++++
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~-~~~~~~~~Dl~d~~-~~~~~~-- 62 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVE-----LG-------YEVVVVDNLS---SGRREFVN-PSAELHVRDLKDYS-WGAGIK-- 62 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCS---SCCGGGSC-TTSEEECCCTTSTT-TTTTCC--
T ss_pred EEEEECCCChHHHHHHHHHHh-----CC-------CEEEEEeCCC---CCchhhcC-CCceEEECccccHH-HHhhcC--
Confidence 7999998 8888888777764 25 3688887642 11111111 1111111 111222 444454
Q ss_pred CCcEEEeecCCCCCC----------------CHHHHHHHHcCCCCcEEEecC
Q 007112 437 KPTMLMGTSGVGKTF----------------TKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 437 kPtvLIG~S~~~g~F----------------teevv~~Ma~~~erPIIFaLS 472 (617)
.|++|=+.+....- |..+++++.+..-+.|||.=|
T Consensus 63 -~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 113 (312)
T 3ko8_A 63 -GDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASS 113 (312)
T ss_dssp -CSEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -CCEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCc
Confidence 39999887754211 245777777666678888655
No 452
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=48.13 E-value=9.4 Score=39.40 Aligned_cols=89 Identities=15% Similarity=0.180 Sum_probs=50.6
Q ss_pred ceEEEeCcC-hHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhcc
Q 007112 358 QTFLFLGAG-EAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI 436 (617)
Q Consensus 358 ~riv~~GAG-sAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 436 (617)
.||.|+|+| .+|...+..+.. ..++ +-+.++|++ . +......+.| ..+...++.|+++.-
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~----~~~~------~l~av~d~~----~---~~~~~~a~~~--g~~~~~~~~ell~~~ 63 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRH----HPDA------QIVAACDPN----E---DVRERFGKEY--GIPVFATLAEMMQHV 63 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHH----CTTE------EEEEEECSC----H---HHHHHHHHHH--TCCEESSHHHHHHHS
T ss_pred eEEEEEeCCHHHHHHHHHHHHh----CCCe------EEEEEEeCC----H---HHHHHHHHHc--CCCeECCHHHHHcCC
Confidence 589999999 888777766643 1121 234466653 1 1122222222 122347899999988
Q ss_pred CCcEEEeecCCCCCCCHHHHHHHHcCCCCcEE
Q 007112 437 KPTMLMGTSGVGKTFTKEVVEAMASFNEKPVI 468 (617)
Q Consensus 437 kPtvLIG~S~~~g~Fteevv~~Ma~~~erPII 468 (617)
++|+++ +++.+ .+..++++...+. -++++
T Consensus 64 ~vD~V~-i~tp~-~~H~~~~~~al~a-Gk~Vl 92 (387)
T 3moi_A 64 QMDAVY-IASPH-QFHCEHVVQASEQ-GLHII 92 (387)
T ss_dssp CCSEEE-ECSCG-GGHHHHHHHHHHT-TCEEE
T ss_pred CCCEEE-EcCCc-HHHHHHHHHHHHC-CCcee
Confidence 899988 56655 3445555443322 24544
No 453
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=48.04 E-value=33 Score=34.18 Aligned_cols=37 Identities=19% Similarity=0.260 Sum_probs=25.4
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+|+++++||.||++ ||...++..+.+ .| -+++++|+.
T Consensus 43 ~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~Vv~~~~~ 79 (317)
T 3oec_A 43 RLQGKVAFITGAAR---GQGRTHAVRLAQ-DG-------ADIVAIDLC 79 (317)
T ss_dssp TTTTCEEEESSCSS---HHHHHHHHHHHH-TT-------CEEEEEECC
T ss_pred ccCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CeEEEEecc
Confidence 57889999999864 455555555555 36 368888864
No 454
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=47.97 E-value=12 Score=39.13 Aligned_cols=33 Identities=21% Similarity=0.401 Sum_probs=27.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+.+++|+|||.||+..|..+.+ .| .++.++|++
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAM-----YG-------QKCALIEAK 36 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEcCC
Confidence 4689999999999999988864 25 479999986
No 455
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=47.96 E-value=8.9 Score=36.29 Aligned_cols=79 Identities=22% Similarity=0.252 Sum_probs=43.9
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-------ccC
Q 007112 352 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-------EHA 424 (617)
Q Consensus 352 g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~-------~~~ 424 (617)
..+++++++||.||++ ||...++..+.+ .| -+++++|++- +.+......+.. +..
T Consensus 9 ~~~~~~k~vlVTGas~---gIG~~~a~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~ 70 (249)
T 3f9i_A 9 MIDLTGKTSLITGASS---GIGSAIARLLHK-LG-------SKVIISGSNE-------EKLKSLGNALKDNYTIEVCNLA 70 (249)
T ss_dssp CCCCTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHHHCSSEEEEECCTT
T ss_pred cccCCCCEEEEECCCC---hHHHHHHHHHHH-CC-------CEEEEEcCCH-------HHHHHHHHHhccCccEEEcCCC
Confidence 3567899999999854 444555555554 36 3688888641 112222222111 111
Q ss_pred CCCCHHHHHhcc-CCcEEEeecCCC
Q 007112 425 PIKSLLDAVKAI-KPTMLMGTSGVG 448 (617)
Q Consensus 425 ~~~~L~eaV~~v-kPtvLIG~S~~~ 448 (617)
...++.++++.. ++|+||=..+..
T Consensus 71 ~~~~~~~~~~~~~~id~li~~Ag~~ 95 (249)
T 3f9i_A 71 NKEECSNLISKTSNLDILVCNAGIT 95 (249)
T ss_dssp SHHHHHHHHHTCSCCSEEEECCC--
T ss_pred CHHHHHHHHHhcCCCCEEEECCCCC
Confidence 223466677765 689999777654
No 456
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=47.58 E-value=15 Score=37.15 Aligned_cols=91 Identities=16% Similarity=0.134 Sum_probs=50.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhcc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKAI 436 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~v 436 (617)
..||.|+|+|..|...++.+ .+..|. +-+.++|++ . +......+.| ..+...++.|+++.-
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l----~~~~~~------~lvav~d~~----~---~~~~~~~~~~--g~~~~~~~~~~l~~~ 65 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAY----TKSEKL------KLVTCYSRT----E---DKREKFGKRY--NCAGDATMEALLARE 65 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHH----TTCSSE------EEEEEECSS----H---HHHHHHHHHH--TCCCCSSHHHHHHCS
T ss_pred cceEEEEccCHHHHHHHHHH----HhCCCc------EEEEEECCC----H---HHHHHHHHHc--CCCCcCCHHHHhcCC
Confidence 36899999999776554444 221121 224466653 1 1122222222 123367899999887
Q ss_pred CCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEE
Q 007112 437 KPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIF 469 (617)
Q Consensus 437 kPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 469 (617)
++|+++ +++.. ....++++...+. .++|+.
T Consensus 66 ~~D~V~-i~tp~-~~h~~~~~~al~~-gk~vl~ 95 (354)
T 3db2_A 66 DVEMVI-ITVPN-DKHAEVIEQCARS-GKHIYV 95 (354)
T ss_dssp SCCEEE-ECSCT-TSHHHHHHHHHHT-TCEEEE
T ss_pred CCCEEE-EeCCh-HHHHHHHHHHHHc-CCEEEE
Confidence 899888 55544 4555665554433 355553
No 457
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=47.56 E-value=16 Score=34.29 Aligned_cols=38 Identities=24% Similarity=0.312 Sum_probs=25.1
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.+++++++||.||+. ||...++..+.+ .| -+++++|++
T Consensus 7 ~~~~~k~vlITGasg---giG~~la~~l~~-~G-------~~V~~~~r~ 44 (254)
T 2wsb_A 7 FRLDGACAAVTGAGS---GIGLEICRAFAA-SG-------ARLILIDRE 44 (254)
T ss_dssp TCCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred cCCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 357888999999753 444555555554 36 358888874
No 458
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=47.46 E-value=13 Score=39.38 Aligned_cols=37 Identities=22% Similarity=0.386 Sum_probs=27.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCc
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 403 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GL 403 (617)
.+|||+|||.||...|-.|.+... .| -++.++|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G-------~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DR-------IDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GG-------SEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CC-------CEEEEEecCCC
Confidence 479999999999999999876431 24 36889998644
No 459
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=47.41 E-value=23 Score=33.18 Aligned_cols=38 Identities=24% Similarity=0.366 Sum_probs=24.4
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.++++.++||.||+. ||...++..+.+ .| -+++++|++
T Consensus 7 ~~~~~~~vlVtGasg---giG~~la~~l~~-~G-------~~V~~~~r~ 44 (255)
T 1fmc_A 7 LRLDGKCAIITGAGA---GIGKEIAITFAT-AG-------ASVVVSDIN 44 (255)
T ss_dssp GCCTTCEEEETTTTS---HHHHHHHHHHHT-TT-------CEEEEEESC
T ss_pred CCCCCCEEEEECCcc---HHHHHHHHHHHH-CC-------CEEEEEcCC
Confidence 357788999999742 344445555544 35 358888874
No 460
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=47.36 E-value=33 Score=33.47 Aligned_cols=103 Identities=17% Similarity=0.182 Sum_probs=57.1
Q ss_pred CCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCch----hchhhhc-ccCCCCCH
Q 007112 356 ADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQH----FKKPWAH-EHAPIKSL 429 (617)
Q Consensus 356 ~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~----~k~~fA~-~~~~~~~L 429 (617)
...||+|.|| |-.|..+++.|++ .| .+++.+|+..- ......+.. ....+.. +..+..++
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~ 78 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLE-----KG-------YRVHGLVARRS--SDTRWRLRELGIEGDIQYEDGDMADACSV 78 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCCS--SCCCHHHHHTTCGGGEEEEECCTTCHHHH
T ss_pred cCCeEEEECCCChHHHHHHHHHHH-----CC-------CeEEEEeCCCc--cccccchhhccccCceEEEECCCCCHHHH
Confidence 4578999987 7677777766653 25 36888887521 000000110 0111111 11222467
Q ss_pred HHHHhccCCcEEEeecCCCCC----------------CCHHHHHHHHcCC-CCcEEEecC
Q 007112 430 LDAVKAIKPTMLMGTSGVGKT----------------FTKEVVEAMASFN-EKPVIFALS 472 (617)
Q Consensus 430 ~eaV~~vkPtvLIG~S~~~g~----------------Fteevv~~Ma~~~-erPIIFaLS 472 (617)
.++++.+++|++|=+.+.... -|..+++++.+.. .+.+||.=|
T Consensus 79 ~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 138 (335)
T 1rpn_A 79 QRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAST 138 (335)
T ss_dssp HHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred HHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 888888899999988775431 1335677776655 367887544
No 461
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=47.25 E-value=19 Score=35.47 Aligned_cols=80 Identities=18% Similarity=0.216 Sum_probs=43.1
Q ss_pred CCCCCceEEEeCcCh---HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc------cc
Q 007112 353 GTLADQTFLFLGAGE---AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH------EH 423 (617)
Q Consensus 353 ~~l~d~riv~~GAGs---Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~------~~ 423 (617)
..|+++++||.||++ .|..+|+.+++ .| -+++++|++- ...+.+......+.+ |.
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~-----~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dv 90 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAARE-----AG-------AELAFTYQGD----ALKKRVEPLAEELGAFVAGHCDV 90 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHH-----TT-------CEEEEEECSH----HHHHHHHHHHHHHTCEEEEECCT
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHH-----CC-------CEEEEEcCCH----HHHHHHHHHHHhcCCceEEECCC
Confidence 458889999999864 45555555543 36 3588888751 000111111111111 11
Q ss_pred CCCCCHHHHHhcc-----CCcEEEeecCCC
Q 007112 424 APIKSLLDAVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 424 ~~~~~L~eaV~~v-----kPtvLIG~S~~~ 448 (617)
.+..++.++++.+ ++|+||=..+..
T Consensus 91 ~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 120 (293)
T 3grk_A 91 ADAASIDAVFETLEKKWGKLDFLVHAIGFS 120 (293)
T ss_dssp TCHHHHHHHHHHHHHHTSCCSEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 1223455555554 799999777754
No 462
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=47.10 E-value=17 Score=38.30 Aligned_cols=33 Identities=21% Similarity=0.398 Sum_probs=27.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+..++|+|||.||+..|..+.+. | .++.++|+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~ 58 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGAL-----G-------KRVAIAEEY 58 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-----c-------CEEEEEeCC
Confidence 46899999999999999888652 5 468899984
No 463
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=46.93 E-value=35 Score=33.83 Aligned_cols=78 Identities=15% Similarity=0.207 Sum_probs=44.0
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-----------
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH----------- 421 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~----------- 421 (617)
.+|+++++||.||++ ||...|+..+.+ .| -+++++|++- + .+......+..
T Consensus 37 ~~l~~k~vlVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~~----~---~~~~~~~~l~~~~~~~~~~~~~ 98 (293)
T 3rih_A 37 FDLSARSVLVTGGTK---GIGRGIATVFAR-AG-------ANVAVAARSP----R---ELSSVTAELGELGAGNVIGVRL 98 (293)
T ss_dssp TCCTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESSG----G---GGHHHHHHHTTSSSSCEEEEEC
T ss_pred cCCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEECCH----H---HHHHHHHHHHhhCCCcEEEEEE
Confidence 457889999999854 444455555554 36 3688888751 1 12222222211
Q ss_pred ccCCCCCHHHHHhcc-----CCcEEEeecCCC
Q 007112 422 EHAPIKSLLDAVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 422 ~~~~~~~L~eaV~~v-----kPtvLIG~S~~~ 448 (617)
|-.+..++.++++.+ +.|+||=..+..
T Consensus 99 Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 130 (293)
T 3rih_A 99 DVSDPGSCADAARTVVDAFGALDVVCANAGIF 130 (293)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred eCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 111123455566655 789999776653
No 464
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=46.90 E-value=59 Score=31.67 Aligned_cols=38 Identities=24% Similarity=0.318 Sum_probs=26.2
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.+|+++++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 5 m~l~~k~vlVTGas~---GIG~aia~~l~~-~G-------~~V~~~~r~ 42 (285)
T 3sc4_A 5 MSLRGKTMFISGGSR---GIGLAIAKRVAA-DG-------ANVALVAKS 42 (285)
T ss_dssp -CCTTCEEEEESCSS---HHHHHHHHHHHT-TT-------CEEEEEESC
T ss_pred cCCCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEECC
Confidence 357889999999864 455556666555 36 368889886
No 465
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=46.89 E-value=29 Score=33.41 Aligned_cols=38 Identities=13% Similarity=0.138 Sum_probs=26.1
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.+|+++++||.||++ ||...++..+.+ .|. +++++|++
T Consensus 4 ~~l~~k~~lVTGas~---GIG~aia~~l~~-~G~-------~V~~~~r~ 41 (265)
T 3lf2_A 4 YDLSEAVAVVTGGSS---GIGLATVELLLE-AGA-------AVAFCARD 41 (265)
T ss_dssp CCCTTCEEEEETCSS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred cCcCCCEEEEeCCCC---hHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 468889999999764 455555555554 363 58888875
No 466
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=46.88 E-value=15 Score=39.09 Aligned_cols=33 Identities=24% Similarity=0.394 Sum_probs=27.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
.+|||+|||.||+..|..+.+. | .++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARH-----N-------AKVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCCC
Confidence 5799999999999999888652 5 4699999874
No 467
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=46.84 E-value=21 Score=35.96 Aligned_cols=49 Identities=29% Similarity=0.285 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 341 LAGILSALKLVGGTLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 341 LAgll~Alr~~g~~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
++..+.|+...+.--.+++++|.|| |..|..++.++.. .|. +++.+|+.
T Consensus 144 ~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~-----~Ga-------~Vi~~~~~ 193 (342)
T 4eye_A 144 YHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKG-----MGA-------KVIAVVNR 193 (342)
T ss_dssp HHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH-----cCC-------EEEEEeCC
Confidence 3344445544444456899999998 8888777666543 362 57777763
No 468
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=46.81 E-value=21 Score=34.24 Aligned_cols=78 Identities=15% Similarity=0.167 Sum_probs=42.2
Q ss_pred CCCceEEEeCcC---hHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchh-----hh-cccCC
Q 007112 355 LADQTFLFLGAG---EAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKP-----WA-HEHAP 425 (617)
Q Consensus 355 l~d~riv~~GAG---sAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~-----fA-~~~~~ 425 (617)
|+++++||.||+ -.|..+|+.+++ .| -+++++|++. + ..+.+...... +. -|..+
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~-----~G-------~~V~~~~r~~---~-~~~~~~~l~~~~~~~~~~~~D~~~ 70 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHR-----EG-------AELAFTYQND---K-LKGRVEEFAAQLGSDIVLQCDVAE 70 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESST---T-THHHHHHHHHHTTCCCEEECCTTC
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHH-----CC-------CEEEEEcCcH---H-HHHHHHHHHHhcCCcEEEEccCCC
Confidence 678899999985 455555555543 36 3588888763 1 10111111111 10 01111
Q ss_pred CCCHHHHHhcc-----CCcEEEeecCCC
Q 007112 426 IKSLLDAVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 426 ~~~L~eaV~~v-----kPtvLIG~S~~~ 448 (617)
..++.++++.+ ++|+||=..+..
T Consensus 71 ~~~v~~~~~~~~~~~g~iD~lv~~Ag~~ 98 (265)
T 1qsg_A 71 DASIDTMFAELGKVWPKFDGFVHSIGFA 98 (265)
T ss_dssp HHHHHHHHHHHHTTCSSEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 22455556544 789999887764
No 469
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=46.80 E-value=19 Score=38.15 Aligned_cols=37 Identities=19% Similarity=0.314 Sum_probs=29.0
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
..+|||+|||.||+..|..+.+. |. ...++.++|+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-----g~----~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-----YG----DANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----HG----GGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-----CC----CCCeEEEEECCC
Confidence 47899999999999999998764 20 125799999865
No 470
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=46.73 E-value=15 Score=37.37 Aligned_cols=35 Identities=14% Similarity=0.318 Sum_probs=26.5
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
..++||+|||.||+..|..+.+ .|. .-++.++|++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-----~~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRK-----LDG-----ETPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHT-----TCS-----SSCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHh-----hCC-----CCCEEEEECC
Confidence 3679999999999999988754 353 2357888764
No 471
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=46.68 E-value=12 Score=37.98 Aligned_cols=36 Identities=28% Similarity=0.369 Sum_probs=29.8
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+|++.++||+|+|..|..-+++|+.+ | .++.++|.+
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~-----G-------a~VtViap~ 45 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPT-----G-------CKLTLVSPD 45 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGG-----T-------CEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhC-----C-------CEEEEEcCC
Confidence 57889999999999999999888653 5 458888864
No 472
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=46.47 E-value=45 Score=33.83 Aligned_cols=50 Identities=20% Similarity=0.080 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEcc
Q 007112 340 VLAGILSALKLVGGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDS 400 (617)
Q Consensus 340 ~LAgll~Alr~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~ 400 (617)
.++..+.|+......-.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 174 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~-----~Ga------~~Vi~~~~ 223 (371)
T 1f8f_A 174 GIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKV-----CGA------SIIIAVDI 223 (371)
T ss_dssp HHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHH-----HTC------SEEEEEES
T ss_pred hHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 333344455323333457899999999777766655432 253 46888875
No 473
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=46.37 E-value=18 Score=38.05 Aligned_cols=35 Identities=31% Similarity=0.372 Sum_probs=27.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 403 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GL 403 (617)
+..++|+|||.||+..|..+.+ .| .++.++|+++-
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~-----~G-------~~V~liEk~~~ 38 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAK-----AK-------YNVLMADPKGE 38 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECTTSS
T ss_pred cceEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECCCC
Confidence 3579999999999999988864 25 36899996653
No 474
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=46.15 E-value=18 Score=38.72 Aligned_cols=37 Identities=27% Similarity=0.377 Sum_probs=29.1
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcc
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 404 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi 404 (617)
...+|+|+|||.||+..|..+.+ .| .++.++|+..-+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~-----~G-------~~V~liEk~~~~ 127 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELAL-----LG-------ARVVLVEKRIKF 127 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESCSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHH-----CC-------CeEEEEEecccc
Confidence 35789999999999999988764 36 368899887443
No 475
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=46.00 E-value=15 Score=37.10 Aligned_cols=101 Identities=18% Similarity=0.202 Sum_probs=60.3
Q ss_pred CCCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhh-------hc-cc
Q 007112 353 GTLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPW-------AH-EH 423 (617)
Q Consensus 353 ~~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~f-------A~-~~ 423 (617)
..+++.+|+|.|| |..|..+++.|++. .|. .+++++|++- . .+...+..+ .. +-
T Consensus 17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~----~g~------~~V~~~~r~~----~---~~~~~~~~~~~~~v~~~~~Dl 79 (344)
T 2gn4_A 17 NMLDNQTILITGGTGSFGKCFVRKVLDT----TNA------KKIIVYSRDE----L---KQSEMAMEFNDPRMRFFIGDV 79 (344)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHH----CCC------SEEEEEESCH----H---HHHHHHHHHCCTTEEEEECCT
T ss_pred HhhCCCEEEEECCCcHHHHHHHHHHHhh----CCC------CEEEEEECCh----h---hHHHHHHHhcCCCEEEEECCC
Confidence 4577899999996 88888888887642 142 4788887741 1 111111111 11 11
Q ss_pred CCCCCHHHHHhccCCcEEEeecCCCCC----C------------CHHHHHHHHcCCCCcEEEecC
Q 007112 424 APIKSLLDAVKAIKPTMLMGTSGVGKT----F------------TKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 424 ~~~~~L~eaV~~vkPtvLIG~S~~~g~----F------------teevv~~Ma~~~erPIIFaLS 472 (617)
.+..++.++++ ++|++|=+.+.... . |..+++++.+..-+-|||.=|
T Consensus 80 ~d~~~l~~~~~--~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS 142 (344)
T 2gn4_A 80 RDLERLNYALE--GVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALST 142 (344)
T ss_dssp TCHHHHHHHTT--TCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCHHHHHHHHh--cCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC
Confidence 12235667776 48999998876531 0 245677776666667887654
No 476
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=45.99 E-value=19 Score=37.66 Aligned_cols=33 Identities=24% Similarity=0.177 Sum_probs=27.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+-.++|+|||.||+..|..+.+. | .++.++|+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~ 35 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQL-----G-------LKTALIEKY 35 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----C-------CEEEEEeCC
Confidence 35799999999999999888653 5 468899986
No 477
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=45.97 E-value=30 Score=34.33 Aligned_cols=102 Identities=16% Similarity=0.198 Sum_probs=53.9
Q ss_pred CCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHH
Q 007112 355 LADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAV 433 (617)
Q Consensus 355 l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 433 (617)
++..+|+|.|| |-.|..+++.|++ .|. .+++.+|+..--. ....+.... +.-+..+...+.+++
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g~------~~V~~~~r~~~~~--~~~~~~~~~--~~~d~~~~~~~~~~~ 108 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALND-----KGI------TDILVVDNLKDGT--KFVNLVDLN--IADYMDKEDFLIQIM 108 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHH-----TTC------CCEEEEECCSSGG--GGGGTTTSC--CSEEEEHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHH-----CCC------cEEEEEecCCCcc--hhhcccCce--EeeecCcHHHHHHHH
Confidence 55678999998 8778777777754 251 4578887642100 000111100 111111112455556
Q ss_pred hcc---CCcEEEeecCCCCC--------------CCHHHHHHHHcCCCCcEEEecC
Q 007112 434 KAI---KPTMLMGTSGVGKT--------------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 434 ~~v---kPtvLIG~S~~~g~--------------Fteevv~~Ma~~~erPIIFaLS 472 (617)
+.. ++|++|=+.+.... -|..+++++.+..- .|||.=|
T Consensus 109 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS 163 (357)
T 2x6t_A 109 AGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASS 163 (357)
T ss_dssp TTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred hhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcc
Confidence 532 69999988876532 13567777765544 7887544
No 478
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=45.96 E-value=19 Score=38.85 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=28.8
Q ss_pred CCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 355 LADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 355 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
-.+.+|||+|||.||+..|..|.+. |+ ++.++|+..
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~-----G~-------~v~iiE~~~ 49 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLREL-----GR-------SVHVIETAG 49 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 3456899999999999999888752 64 588999864
No 479
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=45.95 E-value=17 Score=38.88 Aligned_cols=34 Identities=24% Similarity=0.431 Sum_probs=26.7
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.+.+|+|+|||.+|+-.|-.|.+ .|+ ++.++|++
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 44 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRL-----GGV-------DVMVLEQL 44 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 56789999999999999988865 365 46677764
No 480
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=45.85 E-value=41 Score=32.59 Aligned_cols=76 Identities=12% Similarity=0.126 Sum_probs=40.7
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHH
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAV 433 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV 433 (617)
+|+++++||.||++ ||...++..+.+ .| -+++++|++- +.+... ....-+..+..++.+++
T Consensus 25 ~l~gk~vlVTGas~---gIG~aia~~la~-~G-------~~V~~~~r~~-------~~~~~~-~~~~~Dv~~~~~~~~~~ 85 (266)
T 3uxy_A 25 GFEGKVALVTGAAG---GIGGAVVTALRA-AG-------ARVAVADRAV-------AGIAAD-LHLPGDLREAAYADGLP 85 (266)
T ss_dssp -CTTCEEEESSTTS---HHHHHHHHHHHH-TT-------CEEEECSSCC-------TTSCCS-EECCCCTTSHHHHHHHH
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHhh-hccCcCCCCHHHHHHHH
Confidence 57889999999864 455555555554 36 3688888641 112111 01111111112344444
Q ss_pred hcc-----CCcEEEeecCCC
Q 007112 434 KAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 434 ~~v-----kPtvLIG~S~~~ 448 (617)
+.+ ++|+||=..+..
T Consensus 86 ~~~~~~~g~iD~lvnnAg~~ 105 (266)
T 3uxy_A 86 GAVAAGLGRLDIVVNNAGVI 105 (266)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHhcCCCCEEEECCCCC
Confidence 433 799999877754
No 481
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=45.82 E-value=32 Score=32.52 Aligned_cols=77 Identities=13% Similarity=0.189 Sum_probs=43.1
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc----------c
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH----------E 422 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~----------~ 422 (617)
.+++++++||.||+. ||...++..+.+ .| -+++++|++ . +.+......+.. |
T Consensus 5 ~~~~~k~vlITGas~---giG~~~a~~l~~-~G-------~~V~~~~r~----~---~~~~~~~~~~~~~~~~~~~~~~D 66 (253)
T 3qiv_A 5 MRFENKVGIVTGSGG---GIGQAYAEALAR-EG-------AAVVVADIN----A---EAAEAVAKQIVADGGTAISVAVD 66 (253)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC----H---HHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCCEEEEECCCC---hHHHHHHHHHHH-CC-------CEEEEEcCC----H---HHHHHHHHHHHhcCCcEEEEEcc
Confidence 467889999999753 444455555544 36 358888874 1 112222222111 1
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEeecCC
Q 007112 423 HAPIKSLLDAVKAI-----KPTMLMGTSGV 447 (617)
Q Consensus 423 ~~~~~~L~eaV~~v-----kPtvLIG~S~~ 447 (617)
..+..++.++++.+ ++|+||=..+.
T Consensus 67 ~~~~~~~~~~~~~~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 67 VSDPESAKAMADRTLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp TTSHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 11123455566654 89999987775
No 482
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=45.79 E-value=17 Score=38.09 Aligned_cols=33 Identities=24% Similarity=0.257 Sum_probs=26.8
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+.++||+|||.||+..|..+.+. | .++.++|+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQL-----G-------IPTVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEccC
Confidence 35799999999999999877653 5 479999984
No 483
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=45.77 E-value=15 Score=37.18 Aligned_cols=126 Identities=11% Similarity=0.019 Sum_probs=72.6
Q ss_pred CceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhc
Q 007112 357 DQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKA 435 (617)
Q Consensus 357 d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~ 435 (617)
+.||+++|| |.-|.-+++.+.+ .|. +-++-+|.++- +. + . ...+-..++.|+.+.
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~-----~g~------~~v~~VnP~~~---g~-~-i--------~G~~vy~sl~el~~~ 62 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLT-----YGT------KIVAGVTPGKG---GM-E-V--------LGVPVYDTVKEAVAH 62 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH-----HTC------EEEEEECTTCT---TC-E-E--------TTEEEESSHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHH-----cCC------eEEEEECCCCC---Cc-e-E--------CCEEeeCCHHHHhhc
Confidence 478999999 9888777765543 254 35677887631 11 1 0 011123679998886
Q ss_pred cCCcEEEeecCCCCCCCHHHHHHHHcCCCC-cEEEecCCCCCCCCCCHHHHhccc--cCcEEEeeCCCCCcceeCCeeec
Q 007112 436 IKPTMLMGTSGVGKTFTKEVVEAMASFNEK-PVIFALSNPTSQSECTAEEAYTWS--KGQAIFASGSPFDPVEYNGKVFV 512 (617)
Q Consensus 436 vkPtvLIG~S~~~g~Fteevv~~Ma~~~er-PIIFaLSNPt~~aEct~edA~~wT--~GraifASGSPF~pv~~~Gk~~~ 512 (617)
.+||+.| ....+ .+..+++++..+..-+ -|||+--= +|..-+++.+.. .|-.+++--+| -.+.
T Consensus 63 ~~~Dv~I-i~vp~-~~~~~~~~ea~~~Gi~~vVi~t~G~----~~~~~~~l~~~a~~~gi~vigPNc~--------Gii~ 128 (288)
T 1oi7_A 63 HEVDASI-IFVPA-PAAADAALEAAHAGIPLIVLITEGI----PTLDMVRAVEEIKALGSRLIGGNCP--------GIIS 128 (288)
T ss_dssp SCCSEEE-ECCCH-HHHHHHHHHHHHTTCSEEEECCSCC----CHHHHHHHHHHHHHHTCEEEESSSC--------EEEE
T ss_pred CCCCEEE-EecCH-HHHHHHHHHHHHCCCCEEEEECCCC----CHHHHHHHHHHHHHcCCEEEeCCCC--------eEEc
Confidence 6799988 44433 6888999988776655 34554211 221122333322 35446654443 3455
Q ss_pred cCCCCccc
Q 007112 513 PGQGNNAY 520 (617)
Q Consensus 513 p~Q~NN~y 520 (617)
|+++.|..
T Consensus 129 ~~~~~~~~ 136 (288)
T 1oi7_A 129 AEETKIGI 136 (288)
T ss_dssp TTTEEEES
T ss_pred CCCceeEE
Confidence 77776665
No 484
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=45.74 E-value=32 Score=33.01 Aligned_cols=36 Identities=14% Similarity=0.166 Sum_probs=23.2
Q ss_pred CCCCceEEEeCcCh-HHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 354 TLADQTFLFLGAGE-AGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 354 ~l~d~riv~~GAGs-Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
++++.++||.||+. .|..+|+.+ .++ | -+++++|++
T Consensus 31 ~l~~k~vlITGasggIG~~la~~L----~~~-G-------~~V~~~~r~ 67 (279)
T 3ctm_A 31 SLKGKVASVTGSSGGIGWAVAEAY----AQA-G-------ADVAIWYNS 67 (279)
T ss_dssp CCTTCEEEETTTTSSHHHHHHHHH----HHH-T-------CEEEEEESS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHH----HHC-C-------CEEEEEeCC
Confidence 57788999999753 344444444 432 5 368888875
No 485
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=45.70 E-value=24 Score=35.36 Aligned_cols=93 Identities=11% Similarity=0.103 Sum_probs=50.4
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhcccCCCCCHHHHHhc
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHAPIKSLLDAVKA 435 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~eaV~~ 435 (617)
+..||.|+|+|..|...++.+... .+. +-+.++|++ ..+ .....+.|-- .....++.|+++.
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~----~~~------~~~av~d~~----~~~---~~~~a~~~~~-~~~~~~~~~ll~~ 65 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLA----GNG------EVVAVSSRT----LES---AQAFANKYHL-PKAYDKLEDMLAD 65 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHH----CSE------EEEEEECSC----SST---TCC---CCCC-SCEESCHHHHHTC
T ss_pred CceEEEEEechHHHHHHHHHHHhC----CCc------EEEEEEcCC----HHH---HHHHHHHcCC-CcccCCHHHHhcC
Confidence 447999999999887666555321 121 224466664 222 2222222210 0124689999997
Q ss_pred cCCcEEEeecCCCCCCCHHHHHHHHcCCCCcEEE
Q 007112 436 IKPTMLMGTSGVGKTFTKEVVEAMASFNEKPVIF 469 (617)
Q Consensus 436 vkPtvLIG~S~~~g~Fteevv~~Ma~~~erPIIF 469 (617)
-++|+++ +++.. .+..++++...+. .++++.
T Consensus 66 ~~~D~V~-i~tp~-~~h~~~~~~al~a-Gk~Vl~ 96 (329)
T 3evn_A 66 ESIDVIY-VATIN-QDHYKVAKAALLA-GKHVLV 96 (329)
T ss_dssp TTCCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred CCCCEEE-ECCCc-HHHHHHHHHHHHC-CCeEEE
Confidence 7789887 55544 4555655544332 345554
No 486
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=45.67 E-value=15 Score=35.44 Aligned_cols=32 Identities=16% Similarity=0.232 Sum_probs=24.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
..|+|+|||.||+-.|..+.+ .|+ ++.++|+.
T Consensus 5 yDvvIIG~GpAGl~AA~~la~-----~g~-------~v~liE~~ 36 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGR-----SSL-------KPVMYEGF 36 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CcEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 369999999999988866644 364 57788864
No 487
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=45.56 E-value=36 Score=33.87 Aligned_cols=50 Identities=12% Similarity=-0.070 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 340 VLAGILSALKLVGGTLADQTFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 340 ~LAgll~Alr~~g~~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.++..+.|++..+..-.+++++|.|| |..|..+++++.. .| -+++.+|++
T Consensus 129 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~G-------~~Vi~~~~~ 179 (333)
T 1wly_A 129 KGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARH-----LG-------ATVIGTVST 179 (333)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred hHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 34444555553444446789999996 8888888776653 35 258888764
No 488
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=45.53 E-value=43 Score=33.92 Aligned_cols=39 Identities=18% Similarity=0.164 Sum_probs=26.2
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 352 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 352 g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
...-.++++||.|||..|...+.+... .|. ++++.+|+.
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~avqla~~-----~Ga------~~Vi~~~~~ 224 (373)
T 2fzw_A 186 AKLEPGSVCAVFGLGGVGLAVIMGCKV-----AGA------SRIIGVDIN 224 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECSC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcCC
Confidence 334457899999999877766655432 253 478888753
No 489
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=45.47 E-value=19 Score=38.96 Aligned_cols=38 Identities=21% Similarity=0.320 Sum_probs=29.3
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 403 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GL 403 (617)
..+|||+|||.||.-.|-.|.+... .| -+|.++|+.-.
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQ--GT-------ADITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTT--TS-------SEEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcC--CC-------CcEEEEeCCCC
Confidence 4689999999999999998876420 24 36899998644
No 490
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=45.46 E-value=25 Score=34.07 Aligned_cols=80 Identities=10% Similarity=0.109 Sum_probs=39.7
Q ss_pred CCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcc-cCCchhchhhhc-ccCCCCCHHH
Q 007112 354 TLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRK-ESLQHFKKPWAH-EHAPIKSLLD 431 (617)
Q Consensus 354 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~-~~L~~~k~~fA~-~~~~~~~L~e 431 (617)
+|+++++||.||++ ||...++..+.+ .| -+++++|++- ... +.+......+.. |.....++.+
T Consensus 24 ~l~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 88 (260)
T 3gem_A 24 TLSSAPILITGASQ---RVGLHCALRLLE-HG-------HRVIISYRTE----HASVTELRQAGAVALYGDFSCETGIMA 88 (260)
T ss_dssp ---CCCEEESSTTS---HHHHHHHHHHHH-TT-------CCEEEEESSC----CHHHHHHHHHTCEEEECCTTSHHHHHH
T ss_pred CCCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----HHHHHHHHhcCCeEEECCCCCHHHHHH
Confidence 46788999999753 444455555544 36 3588888752 110 001111111111 1112234555
Q ss_pred HHhcc-----CCcEEEeecCCC
Q 007112 432 AVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 432 aV~~v-----kPtvLIG~S~~~ 448 (617)
+++.+ ++|+||=..+..
T Consensus 89 ~~~~~~~~~g~iD~lv~nAg~~ 110 (260)
T 3gem_A 89 FIDLLKTQTSSLRAVVHNASEW 110 (260)
T ss_dssp HHHHHHHHCSCCSEEEECCCCC
T ss_pred HHHHHHHhcCCCCEEEECCCcc
Confidence 55544 799999776643
No 491
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=45.43 E-value=18 Score=38.83 Aligned_cols=38 Identities=21% Similarity=0.372 Sum_probs=28.7
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGL 403 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GL 403 (617)
..+|||+|||.||+..|-.|.+... .| -++.++|+.-+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~~ 42 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQ--QQ-------ANITLIESAAI 42 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCC--SS-------CEEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcC--CC-------CEEEEECCCCC
Confidence 4689999999999999988875320 25 36889998543
No 492
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=45.33 E-value=13 Score=36.88 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=26.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 358 QTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 358 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
.+|+|+|||.+|+.+|..|.+.. ..| -++.++|+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~--~~G-------~~V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQT--SGP-------LYLAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC---CC-------EEEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhc--cCC-------ceEEEEECC
Confidence 37999999999999998886410 024 368888876
No 493
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=45.19 E-value=19 Score=34.36 Aligned_cols=98 Identities=17% Similarity=0.138 Sum_probs=55.3
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc-ccCCCCCHHHHHhcc
Q 007112 359 TFLFLGA-GEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH-EHAPIKSLLDAVKAI 436 (617)
Q Consensus 359 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~eaV~~v 436 (617)
+|+|.|| |-.|..+++.|++. ..| .+++.+|++. ++...+......+.. +-.+..+|.++++.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~- 66 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKK---VPA-------SQIIAIVRNV----EKASTLADQGVEVRHGDYNQPESLQKAFAG- 66 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTTHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred eEEEEcCCchHHHHHHHHHHHh---CCC-------CeEEEEEcCH----HHHhHHhhcCCeEEEeccCCHHHHHHHHhc-
Confidence 6899998 87887777776531 003 3578887741 111111111111111 11222357778875
Q ss_pred CCcEEEeecCCCC------CCCHHHHHHHHcCCCCcEEEecC
Q 007112 437 KPTMLMGTSGVGK------TFTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 437 kPtvLIG~S~~~g------~Fteevv~~Ma~~~erPIIFaLS 472 (617)
+|++|=+++... .-+..+++++.+..-+.|||.=|
T Consensus 67 -~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 107 (287)
T 2jl1_A 67 -VSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGY 107 (287)
T ss_dssp -CSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred -CCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 899998877531 02456778887766667887544
No 494
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=45.18 E-value=44 Score=33.93 Aligned_cols=39 Identities=18% Similarity=0.130 Sum_probs=26.1
Q ss_pred CCCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 352 GGTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 352 g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
...-.+++|+|+|||..|...+.+... .|. ++++.+|+.
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~ 225 (373)
T 1p0f_A 187 AKVTPGSTCAVFGLGGVGFSAIVGCKA-----AGA------SRIIGVGTH 225 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECSC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECCC
Confidence 333457899999999877766655432 253 468888753
No 495
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=44.99 E-value=54 Score=33.23 Aligned_cols=33 Identities=18% Similarity=0.434 Sum_probs=24.1
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSK 401 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~ 401 (617)
+++++|.|||..|..++.++.. .| | +++.+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~-----~G-----a--~Vi~~~~~ 213 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRT-----YG-----L--EVWMANRR 213 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHH-----HT-----C--EEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CC-----C--EEEEEeCC
Confidence 8999999998777766665543 25 2 68888864
No 496
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=44.91 E-value=19 Score=37.66 Aligned_cols=34 Identities=24% Similarity=0.243 Sum_probs=27.6
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
+.+|+|+|||.||+..|..+.+. | .++.++|+..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~-----G-------~~V~liE~~~ 38 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQL-----G-------FNTACVEKRG 38 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEecCC
Confidence 35799999999999999888652 5 3699999854
No 497
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=44.84 E-value=13 Score=37.91 Aligned_cols=35 Identities=17% Similarity=0.367 Sum_probs=27.2
Q ss_pred CceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcc
Q 007112 357 DQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLI 404 (617)
Q Consensus 357 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi 404 (617)
..++||+|+|.||+..|..+.+ .| ++.++|+.-..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~-----~g--------~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQ-----TY--------EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTT-----TS--------EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhh-----cC--------CEEEEECCCCC
Confidence 3589999999999999988842 23 79999987543
No 498
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=44.72 E-value=16 Score=39.87 Aligned_cols=36 Identities=14% Similarity=0.069 Sum_probs=28.4
Q ss_pred CCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCC
Q 007112 356 ADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKG 402 (617)
Q Consensus 356 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~G 402 (617)
.+.+|||+|||.||+..|..|.. +.|+ ++.++|+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~----~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHH----ELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH----TTCC-------CEEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH----cCCC-------CEEEEECCC
Confidence 34689999999999999988862 1363 688999864
No 499
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=44.68 E-value=30 Score=34.67 Aligned_cols=45 Identities=13% Similarity=0.023 Sum_probs=31.1
Q ss_pred CHHHHHhccC-CcEEEeecCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007112 428 SLLDAVKAIK-PTMLMGTSGVGKT----------------FTKEVVEAMASFNEKPVIFALS 472 (617)
Q Consensus 428 ~L~eaV~~vk-PtvLIG~S~~~g~----------------Fteevv~~Ma~~~erPIIFaLS 472 (617)
++.++++..+ +|++|=+.+.... -|..++++|.+..-+.|||.=|
T Consensus 83 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS 144 (397)
T 1gy8_A 83 FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSS 144 (397)
T ss_dssp HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECC
Confidence 5777787666 9999988876531 1345778887766677888533
No 500
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=44.62 E-value=31 Score=33.59 Aligned_cols=78 Identities=18% Similarity=0.265 Sum_probs=43.5
Q ss_pred CCCCCceEEEeCcChHHHHHHHHHHHHHHhccCCCHHhhcCeEEEEccCCcccCCcccCCchhchhhhc----------c
Q 007112 353 GTLADQTFLFLGAGEAGTGIAELIALEMSKQTKAPIEEARKKIWLVDSKGLIVSSRKESLQHFKKPWAH----------E 422 (617)
Q Consensus 353 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD~~GLi~~~R~~~L~~~k~~fA~----------~ 422 (617)
.+|+++++||.||++ ||...|+..+.+ .| -+++++|++. +.+......+.. |
T Consensus 24 ~~l~~k~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~D 85 (270)
T 3ftp_A 24 KTLDKQVAIVTGASR---GIGRAIALELAR-RG-------AMVIGTATTE-------AGAEGIGAAFKQAGLEGRGAVLN 85 (270)
T ss_dssp CTTTTCEEEETTCSS---HHHHHHHHHHHH-TT-------CEEEEEESSH-------HHHHHHHHHHHHHTCCCEEEECC
T ss_pred cCCCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHHHhcCCcEEEEEEe
Confidence 568889999999764 444455555544 36 3688887741 112221111111 1
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEeecCCC
Q 007112 423 HAPIKSLLDAVKAI-----KPTMLMGTSGVG 448 (617)
Q Consensus 423 ~~~~~~L~eaV~~v-----kPtvLIG~S~~~ 448 (617)
..+..++.++++.+ +.|+||=..+..
T Consensus 86 v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 116 (270)
T 3ftp_A 86 VNDATAVDALVESTLKEFGALNVLVNNAGIT 116 (270)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 11123455566554 799999777654
Done!