BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007114
(617 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L7E5|WIT1_ARATH WPP domain-interacting tail-anchored protein 1 OS=Arabidopsis
thaliana GN=WIT1 PE=1 SV=2
Length = 703
Score = 433 bits (1114), Expect = e-120, Method: Compositional matrix adjust.
Identities = 288/711 (40%), Positives = 421/711 (59%), Gaps = 106/711 (14%)
Query: 1 MDTDADQETSASVVVNVGDS---ESESNKVYSLEGISANGDVI-EELRSAGEVFSQLELH 56
M+T+ + + + SV N DS E S K E +S G V+ +L SAGEV +++EL
Sbjct: 1 METETEHDRTVSVDDN--DSLVPEPSSTKESFFEDLSLTGQVMNPQLSSAGEVLTKVELD 58
Query: 57 IACSSEKLVNLNILTMHVATRESEFEAFAKKREHILDDDS---------VETALAFDLLS 107
A SEKLVNL++LTM + TRE++FE+F K+E ++ S E AL FDLLS
Sbjct: 59 FAFVSEKLVNLSLLTMQLGTRENDFESFVSKKEEDEEEPSSNVDDDDDSAEKALEFDLLS 118
Query: 108 GLLDSELRELENFITTLEADFVKAHELISSYTELGKASIEMEEKLLDSEDSLQQSRDQIL 167
+L+SE++ELE+ + L+ + A +IS + G+A +++E KL D+E SL Q +Q++
Sbjct: 119 SILNSEVKELESLLGFLQNEIQSARVMISPFQHDGEAFLDLEGKLNDTEQSLGQLMEQVV 178
Query: 168 EIKKQSAKFQRTLSALDREGNWISDKDTGSLEDDQFLNENAKIKLQTAEQQRHFLRMLEK 227
E+KKQS+ FQR S LD +G+W + + S D +F + +AKI +QTA+QQR+ LRMLEK
Sbjct: 179 EMKKQSSNFQRLSSGLDEQGSWSGGQTSVSQNDGEFGDLSAKINMQTADQQRNVLRMLEK 238
Query: 228 SLAREMDLEKKLTESRQVEEALKFRLGSFEQELLYTEEEAMDACERLFEAENSAEVLKGI 287
SLA+EM+LEKKL+ESR E L+ +L S EQ+++Y EE DA R EA+N+AEV KG
Sbjct: 239 SLAKEMELEKKLSESRNTERELEMKLYSSEQDVVYMEEVTEDAFSRWLEADNAAEVFKGT 298
Query: 288 SKELLGRLQIVLFNMNGSVQREAGLRSKL-------------------------DSLVKQ 322
SKE+ G+LQI+ FN++GS +RE L+SKL D LV Q
Sbjct: 299 SKEMSGKLQILQFNLSGSFKREDNLKSKLVDSKERLEAKECALHKLDSSNARLADFLVAQ 358
Query: 323 VE-VKESV--------------------IASLRENLSEAQARADGAEVRCKSLAETNIE- 360
E +KES+ ++SL E L+E + + A+ +L T++E
Sbjct: 359 TEGLKESLQEAEEKLILLNTENSTLSEKVSSLEEQLNEYGIQTEDADATSGALI-TDLER 417
Query: 361 LNEDLKGSRATSE-----------------------------------KVESLERQLRES 385
+NE+LK A +E K+ SLE+ LR+S
Sbjct: 418 INEELKDKLAKTEARAEETESKCKILEESKKELQDELGNFRDKGFTIHKLASLEKHLRDS 477
Query: 386 DIQLQHAVAYAEASLEKQNMLYSTVKDMENLIQDLKLKVSKADSRADSAEEKLIILSEAN 445
D+QL+HAVA EAS EKQN+LYSTV DME++I+DLK KV KA++RAD EEKLI++SE+N
Sbjct: 478 DLQLEHAVAAVEASKEKQNLLYSTVSDMEDVIEDLKSKVLKAENRADITEEKLIMVSESN 537
Query: 446 AGLTEEISFLRDRLECLEASLHQAEETKLATAKDIGIRTKVITNLVMQMAVERERLRQQI 505
A + EE+ F + RL+ E L QAEE KL TAKDIG+ K++ LVMQ+A ERERL +QI
Sbjct: 538 AEVNEELKFFKGRLKEGEKYLQQAEERKLRTAKDIGVHNKIMKKLVMQLAAERERLHKQI 597
Query: 506 SSLAMENKVMVVKLQQTKKDPSIVRHDSTTASFERESKEVTELSAAVSEEDKRQKN--VS 563
++L+ EN V++VKL++ K + + + S + ++ +A+ + R + +S
Sbjct: 598 TNLSRENCVLMVKLKKVGKTGYMESGNGSEVSPK------SDQNASSCHQGSRLQATFIS 651
Query: 564 AGETEVASVDLKSEVGTLRRIDAGLLTSKHFFIAVLIVLISAAAYYFQKQN 614
E KS++G++RR+D G L KH +A+L++LIS+ AY +QN
Sbjct: 652 LTNPEEEETGSKSDIGSVRRLDVGALRFKHILVAILVILISSIAYVISQQN 702
>sp|A8MQR0|WIT2_ARATH WPP domain-interacting tail-anchored protein 2 OS=Arabidopsis
thaliana GN=WIT2 PE=1 SV=1
Length = 627
Score = 270 bits (690), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 217/630 (34%), Positives = 345/630 (54%), Gaps = 102/630 (16%)
Query: 49 VFSQLELHIACSSEKLVNLNILTMHVATRESEFEAFAKKREHILDDD--SVETALAFDLL 106
+ ++LE+ A +SEKL+NL++L MH+ +++ E LD S E AL FDLL
Sbjct: 26 MLTKLEIDSAYTSEKLMNLHVLLMHLLAWDNDLEGMG-----TLDSSPASFEKALTFDLL 80
Query: 107 SGLLDSELRELENFITTLEADFVKAHELISSYTELGKASIEMEEKLLDSEDSLQQSRDQI 166
G+L+SE++E++ + LEA V ISS I +E KL +S +SL+QSR Q+
Sbjct: 81 CGILESEVKEVDEVLDVLEAQIVDTSYKISSCKH--GNYIVIEGKLGESAESLKQSRGQV 138
Query: 167 LEIKKQSAKFQRTLSALDREGNWISDKDTGSLEDDQFLNENAKIKLQTAE-QQRHFLRML 225
EI Q A+ +RTL ++I + G+ E+++ + K L+ ++ + ++ LRML
Sbjct: 139 SEITLQLAQLRRTL-------HYIRN---GTSENEESVELRQKYALKPSDLRHKNALRML 188
Query: 226 EKSLAREMDLEKKLTESRQVEEALKFRLGSFEQELLYTEEEAMDACERLFEAENSAEVLK 285
EKSL+RE++LEKKL E +Q EE LK +L E+ EE + R EA+NS+EVL
Sbjct: 189 EKSLSRELELEKKLMEFQQNEEQLKLKLHYTEEVSSRMEEASEFIWGRFLEADNSSEVLT 248
Query: 286 GISKELLGRLQIVLFNMNGSVQREAGLRSKLDSLVKQVEVKE-----------------S 328
GISKEL+GRLQI+ F++NGS QRE+ L+SKL+ Q+E K+ S
Sbjct: 249 GISKELVGRLQILQFSLNGSAQRESELKSKLEDCTVQLEAKDLLVQKLEGTISENSEIVS 308
Query: 329 VIASLRENLSEAQARADGAEVRCKS-----------LAE--------------------- 356
+ +LRE + A+ + ++ KS LAE
Sbjct: 309 EVLTLREYVKSAEQKLKNTDLELKSVNASKQEILVHLAEMENANESVKENLFEAESRAES 368
Query: 357 ----------TNIELNEDLK----GSRATSEKVESLERQLRESDIQLQHAVAYAEASLEK 402
N+EL E+L ++KV SLE+Q+RE ++Q+Q++ +EA+ E+
Sbjct: 369 GEAKIKELDAANLELTEELNFLKDADDKKTKKVNSLEKQVRELEVQVQNSKVSSEANQEQ 428
Query: 403 QNMLYSTVKDMENLIQDLKLKVSKADSRADSAEEKLIILSEANAGLTEEISFLRDRLECL 462
QNMLYS + DME LI+DLK K SKA+SR ++ EE+ I+LS N+ L +++SFLR + + L
Sbjct: 429 QNMLYSAIWDMETLIEDLKSKASKAESRTETVEEQCIVLSTTNSELNKDVSFLRQKAKSL 488
Query: 463 EASLHQAEETKLATAKDIGIRTKVITNLVMQMAVERERLRQQISSLAMENKVMVVKLQQT 522
EA L A K A++I R KV+ ++++Q++ ERER+++Q+ SLA ENK++ V
Sbjct: 489 EAMLDLANNEKERYAQEITTRNKVLMDMMLQLSSERERIQEQLYSLAKENKILRV----N 544
Query: 523 KKDPSIVRHDSTTA----SFERESKEVTELSAAVSEEDKRQKNVSAGETEVASVDLKSEV 578
+ + R+ S SF + E+ L+ ++ E+++ ++ E E SV KS
Sbjct: 545 QCSNTYQRNGSYAGDKELSFHADGHEIEALAESLQEDERTRE-----EPEKQSVSEKS-- 597
Query: 579 GTLRRIDAGLLTSKHFFIAVLIVLISAAAY 608
+RR + KH + L+ ++ + +
Sbjct: 598 SEIRRA----IKLKHILVVALVFVLFCSFF 623
>sp|Q9TV62|MYH4_PIG Myosin-4 OS=Sus scrofa GN=MYH4 PE=2 SV=1
Length = 1937
Score = 36.2 bits (82), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 23/183 (12%)
Query: 318 SLVKQVEVKESVIASLRENLS---EAQARADG---AEVRCKSLAETNIELNEDLKGSRAT 371
S K+ E++E ++A ++E + QA ADG AE RC L +T I+L +K
Sbjct: 868 SEAKRKELEEKMVALMQEKNDLQLQVQAEADGLADAEERCDQLIKTKIQLEAKIK----- 922
Query: 372 SEKVESLERQLRESDIQLQHAVAYAEASLEKQNMLYSTVKDMENLIQDLKLKVSKADSRA 431
E ER E +I AE + +K+ L +++ I DL+L ++K +
Sbjct: 923 ----EVTERAEDEEEIN-------AELTAKKRK-LEDECSELKKDIDDLELTLAKVEKEK 970
Query: 432 DSAEEKLIILSEANAGLTEEISFLRDRLECLEASLHQAEETKLATAKDIGIRTKVITNLV 491
+ E K+ L+E AGL E I+ L + L+ + Q + A + TK T L
Sbjct: 971 HATENKVKNLTEEMAGLDENIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLE 1030
Query: 492 MQM 494
Q+
Sbjct: 1031 QQV 1033
>sp|Q5SX39|MYH4_MOUSE Myosin-4 OS=Mus musculus GN=Myh4 PE=1 SV=1
Length = 1939
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 23/183 (12%)
Query: 318 SLVKQVEVKESVIASLRENLS---EAQARADG---AEVRCKSLAETNIELNEDLKGSRAT 371
S K+ E++E ++A ++E + QA ADG AE RC L +T I+L +K
Sbjct: 870 SEAKRKELEEKMVALMQEKNDLQLQVQAEADGLADAEERCDQLIKTKIQLEAKIK----- 924
Query: 372 SEKVESLERQLRESDIQLQHAVAYAEASLEKQNMLYSTVKDMENLIQDLKLKVSKADSRA 431
E ER E +I AE + +K+ L +++ I DL+L ++K +
Sbjct: 925 ----ELTERAEDEEEIN-------AELTAKKRK-LEDECSELKKDIDDLELTLAKVEKEK 972
Query: 432 DSAEEKLIILSEANAGLTEEISFLRDRLECLEASLHQAEETKLATAKDIGIRTKVITNLV 491
+ E K+ L+E AGL E I+ L + L+ + Q + A + TK T L
Sbjct: 973 HATENKVKNLTEEMAGLDENIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLE 1032
Query: 492 MQM 494
Q+
Sbjct: 1033 QQV 1035
>sp|Q29RW1|MYH4_RAT Myosin-4 OS=Rattus norvegicus GN=Myh4 PE=2 SV=1
Length = 1939
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 23/183 (12%)
Query: 318 SLVKQVEVKESVIASLRENLS---EAQARADG---AEVRCKSLAETNIELNEDLKGSRAT 371
S K+ E++E ++A ++E + QA ADG AE RC L +T I+L +K
Sbjct: 870 SEAKRKELEEKMVALMQEKNDLQLQVQAEADGLADAEERCDQLIKTKIQLEAKIK----- 924
Query: 372 SEKVESLERQLRESDIQLQHAVAYAEASLEKQNMLYSTVKDMENLIQDLKLKVSKADSRA 431
E ER E +I AE + +K+ L +++ I DL+L ++K +
Sbjct: 925 ----ELTERAEDEEEIN-------AELTAKKRK-LEDECSELKKDIDDLELTLAKVEKEK 972
Query: 432 DSAEEKLIILSEANAGLTEEISFLRDRLECLEASLHQAEETKLATAKDIGIRTKVITNLV 491
+ E K+ L+E AGL E I L + L+ + Q + A + TK T L
Sbjct: 973 HATENKVKNLTEEMAGLDENIVKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLE 1032
Query: 492 MQM 494
Q+
Sbjct: 1033 QQV 1035
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.126 0.319
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 185,593,275
Number of Sequences: 539616
Number of extensions: 7185613
Number of successful extensions: 37233
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 2005
Number of HSP's that attempted gapping in prelim test: 30691
Number of HSP's gapped (non-prelim): 5373
length of query: 617
length of database: 191,569,459
effective HSP length: 124
effective length of query: 493
effective length of database: 124,657,075
effective search space: 61455937975
effective search space used: 61455937975
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)