Query 007114
Match_columns 617
No_of_seqs 58 out of 60
Neff 3.1
Searched_HMMs 13730
Date Mon Mar 25 17:31:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007114.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/007114hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ap3a1 a.24.27.1 (A:12-196) H 55.7 40 0.0029 25.7 16.5 37 437-473 145-181 (185)
2 d2efka1 a.238.1.4 (A:10-288) C 53.4 64 0.0047 27.5 30.5 93 417-512 160-254 (279)
3 d1ux5a_ a.207.1.1 (A:) Bni1 {B 47.5 38 0.0028 32.4 9.7 110 63-183 257-367 (411)
4 d2ap3a1 a.24.27.1 (A:12-196) H 43.2 63 0.0046 24.5 17.8 41 432-472 119-159 (185)
5 d2bbha1 d.328.1.1 (A:13-244) M 39.3 24 0.0018 30.5 6.2 59 104-181 156-214 (232)
6 d1v9da_ a.207.1.1 (A:) Diaphan 38.2 86 0.0063 28.9 10.4 106 63-180 171-277 (332)
7 d2fcwa1 a.13.1.1 (A:216-320) a 36.9 93 0.0068 25.8 9.1 42 468-509 50-100 (105)
8 d1ez3a_ a.47.2.1 (A:) Syntaxin 30.1 1.2E+02 0.0089 23.9 9.7 44 447-491 56-99 (124)
9 d1v9da_ a.207.1.1 (A:) Diaphan 25.6 1.7E+02 0.012 26.8 10.0 113 112-231 70-184 (332)
10 d1lvfa_ a.47.2.1 (A:) Syntaxin 23.9 1.6E+02 0.012 23.2 9.6 98 274-385 4-106 (106)
11 d1seta1 a.2.7.1 (A:1-110) Sery 22.2 1.7E+02 0.012 22.8 8.8 69 110-180 33-101 (110)
12 d1gqea_ e.38.1.1 (A:) Polypept 21.4 3.3E+02 0.024 25.9 13.7 27 361-387 53-79 (362)
No 1
>d2ap3a1 a.24.27.1 (A:12-196) Hypothetical protein MW0975 (SA0943) {Staphylococcus aureus [TaxId: 1280]}
Probab=55.68 E-value=40 Score=25.73 Aligned_cols=37 Identities=11% Similarity=0.154 Sum_probs=20.9
Q ss_pred HHhhHHHhhhhhHHHHHhhHhHHHHHHHHHHHHHHHh
Q 007114 437 KLIILSEANAGLTEEISFLRDRLECLEASLHQAEETK 473 (617)
Q Consensus 437 kc~~LtEtN~eLneEL~fLksr~~~LE~~L~qa~~~K 473 (617)
++..|.+..-.|+..+.-++.....++..+.+++..|
T Consensus 145 ~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ek 181 (185)
T d2ap3a1 145 TQQGVNEKSKAIEQNYKKLKEVSDKYTKVLNKVQKEK 181 (185)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4444555555555555555666666666666555544
No 2
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.38 E-value=64 Score=27.49 Aligned_cols=93 Identities=12% Similarity=0.079 Sum_probs=57.4
Q ss_pred HHHHHHhhhhhhhhhhhHHHH-HhhHHHhhhhhHHHHHhhHhHHHHHHHHHHHHHHHhhhhhHhhhhhh-HHHHHHHHHH
Q 007114 417 IQDLKLKVSKADSRADSAEEK-LIILSEANAGLTEEISFLRDRLECLEASLHQAEETKLATAKDIGIRT-KVITNLVMQM 494 (617)
Q Consensus 417 IEeLK~KvskAESRAe~AE~k-c~~LtEtN~eLneEL~fLksr~~~LE~~L~qa~~~K~stakdI~~~t-K~i~dLv~QL 494 (617)
+..++.++.++...++.|+.+ +..+..+|..... ++...+..+-..|....+......+++-.+- ....+++..+
T Consensus 160 ~~K~~~~~~~~~~~~~~~~~~y~~~l~~~n~~~~~---~~~~~~p~~l~~lq~~e~~r~~~lk~~l~~~~~~~~~~~~~~ 236 (279)
T d2efka1 160 VEKAKQQAHLRSHMAEESKNEYAAQLQRFNRDQAH---FYFSQMPQIFDKLQDMDERRATRLGAGYGLLSEAELEVVPII 236 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 344455555555555555444 2334455544433 5666777777778888888888888776654 4556777777
Q ss_pred HHHHHHHHHhhhhhhhhh
Q 007114 495 AVERERLRQQISSLAMEN 512 (617)
Q Consensus 495 a~ErErL~~Qissl~~eN 512 (617)
..--++++..|..+--+.
T Consensus 237 ~~~~~~l~~~~~~id~~~ 254 (279)
T d2efka1 237 AKCLEGMKVAANAVDPKN 254 (279)
T ss_dssp HHHHHHHHHHHHHCCHHH
T ss_pred HHHHHHHHHHHHHCChHH
Confidence 777777777776664443
No 3
>d1ux5a_ a.207.1.1 (A:) Bni1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=47.48 E-value=38 Score=32.39 Aligned_cols=110 Identities=14% Similarity=0.126 Sum_probs=75.0
Q ss_pred hhhhhhHHHHHHhhhcccccccccccccCCchhHHHHHHHHHHhhhhhhhHHHhHHHHHHHHHHHHhhhhhhhccccccc
Q 007114 63 KLVNLNILTMHVATRESEFEAFAKKREHILDDDSVETALAFDLLSGLLDSELRELENFITTLEADFVKAHELISSYTELG 142 (617)
Q Consensus 63 Kl~NL~~l~M~l~~~~~~~E~~~~~~~~i~~~~s~ekaleFDlL~gilDSEv~Ele~~~~tlq~~I~~~~~~i~s~~~~g 142 (617)
|..=||.++.++.....++..+..+ + .+|++|-.+|+ +-+.+++.+|.+-+..++.++..+.....+-.+.+
T Consensus 257 ~~tLL~yiv~~~~~~~p~l~~~~~e---l---~~v~~a~~~~~--~~l~~~~~~L~~~l~~i~~~~~~~~~~~~~~~~~~ 328 (411)
T d1ux5a_ 257 SMTFLNYVEKIVRLNYPSFNDFLSE---L---EPVLDVVKVSI--EQLVNDCKDFSQSIVNVERSVEIGNLSDSSKFHPL 328 (411)
T ss_dssp CSBHHHHHHHHHHHHCGGGGGHHHH---T---HHHHHHTTCCH--HHHHHHHHHHHHHHHHHHHHHHHSTTTCTTSSCTT
T ss_pred CeeHHHHHHHHHHHhCcHhhccHHH---H---HHHHHHhcCCH--HHHHHHHHHHHHHHHHHHHHHHhhcccccccccch
Confidence 4445677777777766666554443 1 45666666552 34778888888888888888876655444433445
Q ss_pred hhh-HHHHHhhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhh
Q 007114 143 KAS-IEMEEKLLDSEDSLQQSRDQILEIKKQSAKFQRTLSAL 183 (617)
Q Consensus 143 ~~f-~~~~~KL~~~~~sLkQ~~e~i~eik~qsa~fqr~~~~~ 183 (617)
..| ..|..=+..++..+..++..+.++... |..+..+|
T Consensus 329 d~f~~~~~~fl~~~~~~~~~l~~~~~~~~~~---~~~~~~yf 367 (411)
T d1ux5a_ 329 DKVLIKTLPVLPEARKKGDLLEDEVKLTIME---FESLMHTY 367 (411)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHh
Confidence 556 558899999999999999888888876 55666555
No 4
>d2ap3a1 a.24.27.1 (A:12-196) Hypothetical protein MW0975 (SA0943) {Staphylococcus aureus [TaxId: 1280]}
Probab=43.22 E-value=63 Score=24.48 Aligned_cols=41 Identities=5% Similarity=-0.027 Sum_probs=21.9
Q ss_pred hhHHHHHhhHHHhhhhhHHHHHhhHhHHHHHHHHHHHHHHH
Q 007114 432 DSAEEKLIILSEANAGLTEEISFLRDRLECLEASLHQAEET 472 (617)
Q Consensus 432 e~AE~kc~~LtEtN~eLneEL~fLksr~~~LE~~L~qa~~~ 472 (617)
+........+......+...+..+..+...|..++..+...
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 159 (185)
T d2ap3a1 119 SDYAKAYKKAVNSEKTLFKYLNQNDATQQGVNEKSKAIEQN 159 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhhHhHHHHHHHHHHHHHHH
Confidence 33334444555555556666666655666665555544443
No 5
>d2bbha1 d.328.1.1 (A:13-244) Magnesium transport protein CorA, soluble domain {Thermotoga maritima [TaxId: 2336]}
Probab=39.29 E-value=24 Score=30.52 Aligned_cols=59 Identities=14% Similarity=0.255 Sum_probs=42.5
Q ss_pred HHhhhhhhhHHHhHHHHHHHHHHHHhhhhhhhccccccchhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhHHHHHHHh
Q 007114 104 DLLSGLLDSELRELENFITTLEADFVKAHELISSYTELGKASIEMEEKLLDSEDSLQQSRDQILEIKKQSAKFQRTLS 181 (617)
Q Consensus 104 DlL~gilDSEv~Ele~~~~tlq~~I~~~~~~i~s~~~~g~~f~~~~~KL~~~~~sLkQ~~e~i~eik~qsa~fqr~~~ 181 (617)
.+++.|||.=|.....+++.|..+|.+.+..+..... +.....+..+|+....|.|++.
T Consensus 156 ~ll~~lld~ivd~y~~~l~~l~~~id~lE~~v~~~~~-------------------~~~l~~i~~lrr~l~~lrr~l~ 214 (232)
T d2bbha1 156 YLLYSLIDALVDDYFVLLEKIDDEIDVLEEEVLERPE-------------------KETVQRTHQLKRNLVELRKTIW 214 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------------------CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCc-------------------HHHHHHHHHHHHHHHHHHHHHH
Confidence 4889999999999999999999999988887665433 1223457777777777777773
No 6
>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=38.15 E-value=86 Score=28.86 Aligned_cols=106 Identities=16% Similarity=0.188 Sum_probs=68.9
Q ss_pred hhhhhhHHHHHHhhhcccccccccccccCCchhHHHHHHHHHHhhhhhhhHHHhHHHHHHHHHHHHhhhhhhhccccccc
Q 007114 63 KLVNLNILTMHVATRESEFEAFAKKREHILDDDSVETALAFDLLSGLLDSELRELENFITTLEADFVKAHELISSYTELG 142 (617)
Q Consensus 63 Kl~NL~~l~M~l~~~~~~~E~~~~~~~~i~~~~s~ekaleFDlL~gilDSEv~Ele~~~~tlq~~I~~~~~~i~s~~~~g 142 (617)
|..=||.++-++.....++..+..+ . .+|.+|--.|+ .-|.+++.+|.+-+..++.++..... ..+.+
T Consensus 171 ~~tLL~~iv~~~~~~~p~l~~~~~e---L---~~v~~ask~~~--~~l~~~~~~l~~~l~~~~~~l~~~~~----~~~~~ 238 (332)
T d1v9da_ 171 KMTLLHFLAELCENDHPEVLKFPDE---L---AHVEKASRVSA--ENLQKSLDQMKKQIADVERDVQNFPA----ATDEK 238 (332)
T ss_dssp TSBHHHHHHHHHHHSCCTTSSGGGG---C---TTHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHTCCC----CSSSS
T ss_pred CccHHHHHHHHHHHhCchhccchhh---h---hhHHHHhcCCH--HHHHHHHHHHHHHHHHHHHHHHhccc----cccch
Confidence 4444566666666655555555444 2 23555554443 34678888888888888888774332 22334
Q ss_pred hhhH-HHHHhhhhHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 007114 143 KASI-EMEEKLLDSEDSLQQSRDQILEIKKQSAKFQRTL 180 (617)
Q Consensus 143 ~~f~-~~~~KL~~~~~sLkQ~~e~i~eik~qsa~fqr~~ 180 (617)
..|. .|..=+.+++..+++++..+.++.....+.-..+
T Consensus 239 d~f~~~~~~Fl~~a~~~l~~l~~~~~~~~~~~~~~~~yf 277 (332)
T d1v9da_ 239 DKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYF 277 (332)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4555 4888899999999999999999987655554444
No 7
>d2fcwa1 a.13.1.1 (A:216-320) alpha-2-Macroglobulin receptor associated protein (RAP) {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.89 E-value=93 Score=25.81 Aligned_cols=42 Identities=14% Similarity=0.227 Sum_probs=30.8
Q ss_pred HHHHHhhhhhHhhhh---------hhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 007114 468 QAEETKLATAKDIGI---------RTKVITNLVMQMAVERERLRQQISSLA 509 (617)
Q Consensus 468 qa~~~K~stakdI~~---------~tK~i~dLv~QLa~ErErL~~Qissl~ 509 (617)
++.++|..-+.++|- +-+.+.+-+.+++.=.++|+.+|++-.
T Consensus 50 ~ls~ek~~~~e~~g~~~~~~~~~e~~~~le~kiKk~~~kV~Kl~~dLe~rI 100 (105)
T d2fcwa1 50 EIAHEKLRHAESVGDGERVSRSREKHALLEGRTKELGYTVKKHLQDLSGRI 100 (105)
T ss_dssp HHHHHHHHHHHHHTCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhcccchhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555555554 467788999999999999999998754
No 8
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=30.08 E-value=1.2e+02 Score=23.90 Aligned_cols=44 Identities=25% Similarity=0.395 Sum_probs=20.3
Q ss_pred hhHHHHHhhHhHHHHHHHHHHHHHHHhhhhhHhhhhhhHHHHHHH
Q 007114 447 GLTEEISFLRDRLECLEASLHQAEETKLATAKDIGIRTKVITNLV 491 (617)
Q Consensus 447 eLneEL~fLksr~~~LE~~L~qa~~~K~stakdI~~~tK~i~dLv 491 (617)
+.+.--..+|.++..|+....+.+..+..++ +.-+++..+.-|.
T Consensus 56 ~i~~~a~~ik~~Lk~l~~~~~~~~~~~~~s~-~~Rir~~q~~~L~ 99 (124)
T d1ez3a_ 56 DIKKTANKVRSKLKSIEQSIEQEEGLNRSSA-DLRIRKTQHSTLS 99 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSCCCH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCH-HHHHHHHHHHHHH
Confidence 3334444555666666666554333333333 3334443333333
No 9
>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.60 E-value=1.7e+02 Score=26.78 Aligned_cols=113 Identities=15% Similarity=0.142 Sum_probs=59.4
Q ss_pred hHHHhHHHHHHHHHHHHhhhhhhhccccccchhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhhhccCCCCC
Q 007114 112 SELRELENFITTLEADFVKAHELISSYTELGKASIEMEEKLLDSEDSLQQSRDQILEIKKQSAKFQRTLSALDREGNWIS 191 (617)
Q Consensus 112 SEv~Ele~~~~tlq~~I~~~~~~i~s~~~~g~~f~~~~~KL~~~~~sLkQ~~e~i~eik~qsa~fqr~~~~~~~~~~~~~ 191 (617)
+.+..-|.|+-.| ..|-..++++..+..-. ..+..+.+....|.....-+.+||. |.+|.+.+..+=.-||+-+
T Consensus 70 ~~L~~~E~f~~~l-~~ip~~~~Rl~~~~~~~----~f~~~~~~l~~~l~~l~~a~~~l~~-S~~l~~~L~~iL~~GN~mN 143 (332)
T d1v9da_ 70 DDLAESEQFGVVM-GTVPRLRPRLNAILFKL----QFSEQVENIKPEIVSVTAACEELRK-SENFSSLLELTLLVGNYMN 143 (332)
T ss_dssp GGSCHHHHHHHHH-HTSTTHHHHHHHHHHHH----HHHHHHHTTHHHHHHHHHHHHHHHT-CHHHHHCC-----------
T ss_pred hhcChHHHHHHHH-hccccHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHh-ChhHHHHHHHHHHhcchhc
Confidence 4566677787776 35677777665544322 4678888888889888888888865 8889988877655677766
Q ss_pred CCCCCCccccccc--chhhhhhhccHHHHHHHHHHHHHHhhh
Q 007114 192 DKDTGSLEDDQFL--NENAKIKLQTAEQQRHFLRMLEKSLAR 231 (617)
Q Consensus 192 ~~~~~~~ed~~~~--~~~~~~~mqt~eQqR~iLrMLEkSlA~ 231 (617)
+.+ .-....||. .+.--...-+.+.+.++|+-+.+.+.+
T Consensus 144 ~g~-~~g~A~GFkL~sL~kL~d~Ks~d~~~tLL~~iv~~~~~ 184 (332)
T d1v9da_ 144 AGS-RNAGAFGFNISFLCKLRDTKSADQKMTLLHFLAELCEN 184 (332)
T ss_dssp --------------CCHHHHHHSBCSSTTSBHHHHHHHHHHH
T ss_pred ccc-ccccccccCHHHHHhHhhccCCCCCccHHHHHHHHHHH
Confidence 322 111123332 121111122334456788888877654
No 10
>d1lvfa_ a.47.2.1 (A:) Syntaxin 6, SNAP-25 homolog {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=23.94 E-value=1.6e+02 Score=23.24 Aligned_cols=98 Identities=18% Similarity=0.195 Sum_probs=0.0
Q ss_pred HHhhcchHHHHhhhHHHHHHhHHHHhhhcccchhch-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 007114 274 LFEAENSAEVLKGISKELLGRLQIVLFNMNGSVQRE-----AGLRSKLDSLVKQVEVKESVIASLRENLSEAQARADGAE 348 (617)
Q Consensus 274 ~~EAENa~EvL~g~skel~gkLq~~qf~L~as~~RE-----sel~sKLkslEeqL~~len~~e~LKe~i~~AEsra~~ae 348 (617)
||.+..=++-=.+....+..+...+..+=++....| .+|+.-|++++.||.+|+..|. -++
T Consensus 4 F~~v~~EVq~s~~~~~~l~~~w~~~~~~~~~~~~~e~~~~~~eL~~~l~siewdL~dLe~av~--------------~ve 69 (106)
T d1lvfa_ 4 FFVVKGEVQKAVNTAQGLFQRWTELLQGPSAATREEIDWTTNELRNNLRSIEWDLEDLDETIS--------------IVE 69 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHH--------------HHH
Q ss_pred HhhhhhHHhhHHHhhhhhhhhhhhHHHHHHHHHHHHh
Q 007114 349 VRCKSLAETNIELNEDLKGSRATSEKVESLERQLRES 385 (617)
Q Consensus 349 skc~~LteTN~eL~~el~~Lk~lsEKv~sLEkQLkEs 385 (617)
.-...---++.++..--.++.....+|+..+.+|..|
T Consensus 70 ~np~kf~l~~~ei~~Rr~fi~~~~~~I~~~~~~l~~s 106 (106)
T d1lvfa_ 70 ANPRKFNLDATELSIRKAFITSTRQIVRDMKDQMSAS 106 (106)
T ss_dssp SSGGGGTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hCHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
No 11
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=22.17 E-value=1.7e+02 Score=22.79 Aligned_cols=69 Identities=9% Similarity=0.121 Sum_probs=41.6
Q ss_pred hhhHHHhHHHHHHHHHHHHhhhhhhhccccccchhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 007114 110 LDSELRELENFITTLEADFVKAHELISSYTELGKASIEMEEKLLDSEDSLQQSRDQILEIKKQSAKFQRTL 180 (617)
Q Consensus 110 lDSEv~Ele~~~~tlq~~I~~~~~~i~s~~~~g~~f~~~~~KL~~~~~sLkQ~~e~i~eik~qsa~fqr~~ 180 (617)
||.+.|++-.=++.|+++.-.....|.... |+..-.+..+.......++.++.++.++..+.-.+-..|
T Consensus 33 ld~~rr~l~~~~e~l~~~rN~~sk~i~k~~--~~~~~~l~~~~k~lk~~i~~le~~~~~~~~~l~~~ll~i 101 (110)
T d1seta1 33 LDREVQELKKRLQEVQTERNQVAKRVPKAP--PEEKEALIARGKALGEEAKRLEEALREKEARLEALLLQV 101 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 467888888888888888777777665433 333334555555555566666666555555544443333
No 12
>d1gqea_ e.38.1.1 (A:) Polypeptide chain release factor 2 (RF2) {Escherichia coli [TaxId: 562]}
Probab=21.42 E-value=3.3e+02 Score=25.85 Aligned_cols=27 Identities=11% Similarity=0.254 Sum_probs=12.9
Q ss_pred HhhhhhhhhhhhHHHHHHHHHHHHhHH
Q 007114 361 LNEDLKGSRATSEKVESLERQLRESDI 387 (617)
Q Consensus 361 L~~el~~Lk~lsEKv~sLEkQLkEse~ 387 (617)
+..+++.|+..-+....|++.+.+.+.
T Consensus 53 l~KE~s~L~~iVe~~~~l~~~leDl~e 79 (362)
T d1gqea_ 53 LGKERSSLEAVVDTLDQMKQGLEDVSG 79 (362)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445555544455555555544433
Done!