Query 007121
Match_columns 617
No_of_seqs 133 out of 228
Neff 3.2
Searched_HMMs 13730
Date Mon Mar 25 17:42:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007121.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/007121hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2f06a1 d.58.18.11 (A:71-141) 56.0 5.1 0.00037 30.6 3.9 50 80-131 14-63 (71)
2 d1jeoa_ c.80.1.3 (A:) Probable 50.5 21 0.0015 30.3 7.6 85 66-152 39-129 (177)
3 d1kwga3 c.23.16.5 (A:394-590) 42.5 14 0.00098 32.9 5.1 38 26-63 3-46 (197)
4 d1vima_ c.80.1.3 (A:) Hypothet 42.3 42 0.003 28.6 8.2 86 65-151 41-132 (192)
5 d2d59a1 c.2.1.8 (A:4-142) Hypo 41.0 44 0.0032 27.9 8.0 88 52-144 10-115 (139)
6 d1m3sa_ c.80.1.3 (A:) Hypothet 38.4 67 0.0048 27.1 8.9 86 65-151 38-129 (186)
7 d1o17a2 c.27.1.1 (A:71-343) An 32.9 35 0.0025 31.7 6.5 73 56-138 50-151 (273)
8 d1z45a2 c.2.1.2 (A:11-357) Uri 27.5 24 0.0017 31.9 4.2 30 106-135 2-33 (347)
9 d1rpna_ c.2.1.2 (A:) GDP-manno 26.0 31 0.0022 30.3 4.5 30 108-137 3-34 (321)
10 d1k92a1 c.26.2.1 (A:1-188) Arg 24.7 22 0.0016 28.0 3.0 28 107-134 14-41 (188)
11 d1orra_ c.2.1.2 (A:) CDP-tyvel 24.4 28 0.002 30.3 3.9 27 108-134 3-31 (338)
12 d1kjna_ c.115.1.1 (A:) Hypothe 23.9 20 0.0014 31.8 2.7 40 105-144 2-48 (152)
13 d1eq2a_ c.2.1.2 (A:) ADP-L-gly 22.9 23 0.0017 30.3 2.9 27 107-133 1-30 (307)
14 d1db3a_ c.2.1.2 (A:) GDP-manno 22.7 32 0.0024 31.4 4.2 30 106-135 2-33 (357)
15 d1jyea_ c.93.1.1 (A:) Lac-repr 22.3 40 0.0029 29.2 4.5 17 48-64 16-32 (271)
16 d2c5aa1 c.2.1.2 (A:13-375) GDP 21.8 50 0.0037 29.6 5.3 27 108-134 18-46 (363)
17 d1n7ha_ c.2.1.2 (A:) GDP-manno 21.5 37 0.0027 29.9 4.2 30 106-135 2-33 (339)
18 d1ztpa1 d.86.1.2 (A:17-250) Ba 21.1 22 0.0016 33.3 2.6 62 430-518 67-131 (234)
19 d1sb8a_ c.2.1.2 (A:) UDP-N-ace 20.9 38 0.0028 30.3 4.2 29 107-135 18-48 (341)
20 d2c5sa1 c.26.2.6 (A:174-391) T 20.7 28 0.002 29.3 3.0 29 106-134 7-35 (218)
21 d1y1pa1 c.2.1.2 (A:2-343) Alde 20.7 51 0.0037 29.6 5.0 33 103-135 9-43 (342)
22 d1t2aa_ c.2.1.2 (A:) GDP-manno 20.5 39 0.0029 29.9 4.1 29 107-135 3-33 (347)
No 1
>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=56.03 E-value=5.1 Score=30.57 Aligned_cols=50 Identities=18% Similarity=0.306 Sum_probs=36.3
Q ss_pred hHHHHHhhhcCceeeeccCCCCCCCceEEEEeCCcchHHHHHHHhcCCCeEE
Q 007121 80 ASVQHALSSTGIALNHVPAVDNPAPSNYLLISGDRDFSNALHQLRMRRYNIL 131 (617)
Q Consensus 80 ~~Vl~aLsSSGIsLiHVPalDNPpPANIMLISGDrDFS~aLs~LR~RGYNIL 131 (617)
..+.+.|...||.+.++-..+..--+.++|+..|. ..+...|+..||.|+
T Consensus 14 ~~v~~~L~~~~InI~~~y~~~~~~~~~~vl~vdd~--~~a~~~L~~~G~~vl 63 (71)
T d2f06a1 14 AKVLGFLSAEGVFIEYMYSFANNNVANVVIRPSNM--DKCIEVLKEKKVDLL 63 (71)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEETTEEEEEEEESCH--HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHCCCCEEEEEEEcCCCcEEEEEEECCH--HHHHHHHHHCCCEEE
Confidence 35678888889888766554333345677777655 488999999999986
No 2
>d1jeoa_ c.80.1.3 (A:) Probable 3-hexulose-6-phosphate isomerase MJ1247 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=50.52 E-value=21 Score=30.35 Aligned_cols=85 Identities=16% Similarity=0.105 Sum_probs=55.4
Q ss_pred ceEEEEEecCCCCchHHHHHhhhcCceeeeccCC---CCCCCceEEEEeCCc---chHHHHHHHhcCCCeEEEeccCCCC
Q 007121 66 PVSISAYGDTNRIPASVQHALSSTGIALNHVPAV---DNPAPSNYLLISGDR---DFSNALHQLRMRRYNILLAQPHKAS 139 (617)
Q Consensus 66 PVSIrAYGDls~ip~~Vl~aLsSSGIsLiHVPal---DNPpPANIMLISGDr---DFS~aLs~LR~RGYNILLAqP~~aS 139 (617)
.|-|.+.|.-..+-......|...|+...++... .-.+-+-+++||... +...++..++++|..|+++... .+
T Consensus 39 ~I~~~G~G~S~~~a~~~~~~l~~lg~~~~~~~~~~~~~~~~~Dl~I~iS~sG~t~~~i~~~~~ak~~g~~vI~IT~~-~~ 117 (177)
T d1jeoa_ 39 KIFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGETTTPSYEKDDLLILISGSGRTESVLTVAKKAKNINNNIIAIVCE-CG 117 (177)
T ss_dssp SEEEECCHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEEESSSCCHHHHHHHHHHHTTCSCEEEEESS-CC
T ss_pred eEEEEEccHHHHHHHHHHHHHHhcCCcccccccccccccCCCCeEEEeccccchHHHHHHHHHHHHcCCceeEEecC-CC
Confidence 4555555543333345556688889887766651 123445778888664 5667788888999999999853 33
Q ss_pred hhHHhhccceEee
Q 007121 140 APLVAAAKSVWLW 152 (617)
Q Consensus 140 ~~L~aaA~~vWlW 152 (617)
+|...|+.++.+
T Consensus 118 -~l~~~aD~~l~~ 129 (177)
T d1jeoa_ 118 -NVVEFADLTIPL 129 (177)
T ss_dssp -GGGGGCSEEEEC
T ss_pred -cHHHhcCceEEE
Confidence 466777766654
No 3
>d1kwga3 c.23.16.5 (A:394-590) A4 beta-galactosidase middle domain {Thermus thermophilus [TaxId: 274]}
Probab=42.47 E-value=14 Score=32.86 Aligned_cols=38 Identities=16% Similarity=0.125 Sum_probs=31.0
Q ss_pred cCCceEEEEeccCC------CCCCCCChhhHHHHHHHHHHhcCc
Q 007121 26 VTAKTSVWWDIENC------QVPKNCDPHTIAQNISSALVKMNY 63 (617)
Q Consensus 26 a~AkTsVFWDIENC------PVP~G~da~~Va~nIr~ALrklGY 63 (617)
+.|+|+|.+|+|++ +...+++..+.....-++|+++|+
T Consensus 3 ~~A~VAil~D~es~Wa~~~~~~~~~~~y~~~~~~~Y~al~~~gv 46 (197)
T d1kwga3 3 AQAPVALVFDYEAAWIYEVQPQGAEWSYLGLVYLFYSALRRLGL 46 (197)
T ss_dssp CCCSEEEECCHHHHHHHHHCCSSTTCCHHHHHHHHHHHHHTTTC
T ss_pred CcCcEEEEEehhHhhhhhccCCCCCcCHHHHHHHHHHHHHHcCC
Confidence 46789999999984 545677788888888899999887
No 4
>d1vima_ c.80.1.3 (A:) Hypothetical protein AF1796 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=42.30 E-value=42 Score=28.62 Aligned_cols=86 Identities=15% Similarity=0.145 Sum_probs=55.6
Q ss_pred cceEEEEEecCCCCchHHHHHhhhcCceeeeccC--CCC-CCCceEEEEeCCc---chHHHHHHHhcCCCeEEEeccCCC
Q 007121 65 GPVSISAYGDTNRIPASVQHALSSTGIALNHVPA--VDN-PAPSNYLLISGDR---DFSNALHQLRMRRYNILLAQPHKA 138 (617)
Q Consensus 65 GPVSIrAYGDls~ip~~Vl~aLsSSGIsLiHVPa--lDN-PpPANIMLISGDr---DFS~aLs~LR~RGYNILLAqP~~a 138 (617)
+.|-|.+.|.-..+...+...|...|+....+.. ..+ .+-+-+++||... +...++..++++|..|+++.....
T Consensus 41 ~~I~i~G~G~S~~~a~~~~~~l~~lg~~~~~~~~~~~~~i~~~Dl~i~iS~sG~t~~~i~~~~~ak~~g~~vI~IT~~~~ 120 (192)
T d1vima_ 41 RSIFVIGAGRSGYIAKAFAMRLMHLGYTVYVVGETVTPRITDQDVLVGISGSGETTSVVNISKKAKDIGSKLVAVTGKRD 120 (192)
T ss_dssp SCEEEECSHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEECSSSCCHHHHHHHHHHHHHTCEEEEEESCTT
T ss_pred CcEEEEecCcchhhhhhhhhhhcccccccccccccccccccccccceeccccccchhhHHHHHHHHhhcccceeeeeccc
Confidence 4455666665433444555677888887766654 111 2335677787654 566778888889999999976555
Q ss_pred ChhHHhhccceEe
Q 007121 139 SAPLVAAAKSVWL 151 (617)
Q Consensus 139 S~~L~aaA~~vWl 151 (617)
+ +|...|+.++.
T Consensus 121 s-~l~~~ad~~l~ 132 (192)
T d1vima_ 121 S-SLAKMADVVMV 132 (192)
T ss_dssp S-HHHHHCSEEEE
T ss_pred c-ccccccceEEE
Confidence 4 57777776554
No 5
>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=41.00 E-value=44 Score=27.88 Aligned_cols=88 Identities=16% Similarity=0.095 Sum_probs=58.5
Q ss_pred HHHHHHHHhcCcccceEEEEEe---cCCCCchHHHHHhhhcCceeeeccC--------------CCCC-CCceEEEEeCC
Q 007121 52 QNISSALVKMNYCGPVSISAYG---DTNRIPASVQHALSSTGIALNHVPA--------------VDNP-APSNYLLISGD 113 (617)
Q Consensus 52 ~nIr~ALrklGY~GPVSIrAYG---Dls~ip~~Vl~aLsSSGIsLiHVPa--------------lDNP-pPANIMLISGD 113 (617)
..|++.|.+ +-+|-.+| |..+....+++.|...|..++-|.- .|-| +++.++++...
T Consensus 10 ~~i~~~L~~-----~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i~vp~ 84 (139)
T d2d59a1 10 EDIREILTR-----YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFVKP 84 (139)
T ss_dssp HHHHHHHHH-----CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEECSCH
T ss_pred HHHHHHHhc-----CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEEEeCH
Confidence 357777754 45777777 3445556788889889987765532 2334 45665555555
Q ss_pred cchHHHHHHHhcCCCeEEEeccCCCChhHHh
Q 007121 114 RDFSNALHQLRMRRYNILLAQPHKASAPLVA 144 (617)
Q Consensus 114 rDFS~aLs~LR~RGYNILLAqP~~aS~~L~a 144 (617)
..-..++..+...|...+.+++...++.+.+
T Consensus 85 ~~~~~~~~e~~~~g~k~v~~~~G~~~ee~~~ 115 (139)
T d2d59a1 85 KLTMEYVEQAIKKGAKVVWFQYNTYNREASK 115 (139)
T ss_dssp HHHHHHHHHHHHHTCSEEEECTTCCCHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEeccccCHHHHH
Confidence 5556678888888999999998876665443
No 6
>d1m3sa_ c.80.1.3 (A:) Hypothetical protein YckF {Bacillus subtilis [TaxId: 1423]}
Probab=38.36 E-value=67 Score=27.12 Aligned_cols=86 Identities=10% Similarity=0.046 Sum_probs=56.1
Q ss_pred cceEEEEEecCCCCchHHHHHhhhcCceeeeccCC---CCCCCceEEEEeCCc---chHHHHHHHhcCCCeEEEeccCCC
Q 007121 65 GPVSISAYGDTNRIPASVQHALSSTGIALNHVPAV---DNPAPSNYLLISGDR---DFSNALHQLRMRRYNILLAQPHKA 138 (617)
Q Consensus 65 GPVSIrAYGDls~ip~~Vl~aLsSSGIsLiHVPal---DNPpPANIMLISGDr---DFS~aLs~LR~RGYNILLAqP~~a 138 (617)
+.|-|.+.|.-..+.......|...|+....+... .-.+-+.+++||... +...++..++.+|-.|+++.....
T Consensus 38 ~~I~i~G~G~S~~~a~~~~~~l~~lg~~~~~~~d~~~~~~~~~Dl~I~iS~sG~t~~~i~~~~~ak~~g~~iI~IT~~~~ 117 (186)
T d1m3sa_ 38 HQIFTAGAGRSGLMAKSFAMRLMHMGFNAHIVGEILTPPLAEGDLVIIGSGSGETKSLIHTAAKAKSLHGIVAALTINPE 117 (186)
T ss_dssp SCEEEECSHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CeEEEEECcHHHHHHHHHHHHHHhccCCCCcCChhhcccCCCCCEEEEecCccchhhhHHHHHHHHHCCCCEEEEecCCC
Confidence 45556666654334445556688889877665441 112346778888654 556778888899999999976554
Q ss_pred ChhHHhhccceEe
Q 007121 139 SAPLVAAAKSVWL 151 (617)
Q Consensus 139 S~~L~aaA~~vWl 151 (617)
+ +|...|+.++.
T Consensus 118 s-~La~~ad~~i~ 129 (186)
T d1m3sa_ 118 S-SIGKQADLIIR 129 (186)
T ss_dssp S-HHHHHCSEEEE
T ss_pred c-hhhHhCCEEEE
Confidence 4 57777876554
No 7
>d1o17a2 c.27.1.1 (A:71-343) Anthranilate phosphoribosyltransferase (TrpD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=32.93 E-value=35 Score=31.68 Aligned_cols=73 Identities=18% Similarity=0.282 Sum_probs=52.1
Q ss_pred HHHHhcCcccceEEEEEecCCCCchHHHHHhhhcCceeeeccC--------------------------CCCCCCceEEE
Q 007121 56 SALVKMNYCGPVSISAYGDTNRIPASVQHALSSTGIALNHVPA--------------------------VDNPAPSNYLL 109 (617)
Q Consensus 56 ~ALrklGY~GPVSIrAYGDls~ip~~Vl~aLsSSGIsLiHVPa--------------------------lDNPpPANIML 109 (617)
..|+.+|+ ++..-++++.+.|...||...+.|. +-||..+...|
T Consensus 50 DvLe~LGi----------~~~~~~~~~~~~l~~~g~~FlfAp~~hPamk~v~~vRk~Lg~rTiFN~lgPL~NPa~~~~ql 119 (273)
T d1o17a2 50 DVLEALGY----------NIIVPPERAKELVNKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQL 119 (273)
T ss_dssp HHHHHHTB----------CCCCCHHHHHHHHHHHSEEEEEHHHHCGGGGGTHHHHHHHCSCCGGGGCGGGCCTTCCSEEE
T ss_pred HHHHHcCC----------CCCCCHHHHHHHHHHcCceEeeccccChHHHHHHHHHHHcCCCchhhhhhhccCCcCcceee
Confidence 56777777 5666677888899999999887774 67887777766
Q ss_pred Ee-CCcchHHHH-HHHhcCCC-eEEEeccCCC
Q 007121 110 IS-GDRDFSNAL-HQLRMRRY-NILLAQPHKA 138 (617)
Q Consensus 110 IS-GDrDFS~aL-s~LR~RGY-NILLAqP~~a 138 (617)
|- -++++...+ ..|+..|+ +.++++-...
T Consensus 120 iGv~~~~~~~~~a~~l~~lg~~~a~vv~G~dG 151 (273)
T d1o17a2 120 MGVFSKDHLDLLSKSAYELDFNKIILVYGEPG 151 (273)
T ss_dssp EECSSHHHHHHHHHHHTTSCCSEEEEEEETTT
T ss_pred eccccHHHHHHHHHHHHhhcccceEEecCCcc
Confidence 65 567776655 45666776 5777776543
No 8
>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.50 E-value=24 Score=31.88 Aligned_cols=30 Identities=20% Similarity=0.458 Sum_probs=26.0
Q ss_pred eEEEEeCCcch--HHHHHHHhcCCCeEEEecc
Q 007121 106 NYLLISGDRDF--SNALHQLRMRRYNILLAQP 135 (617)
Q Consensus 106 NIMLISGDrDF--S~aLs~LR~RGYNILLAqP 135 (617)
.+|||||-..| +.++..|..+||+|+++..
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~ 33 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADN 33 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEEC
Confidence 47999999999 5689999999999999853
No 9
>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=25.98 E-value=31 Score=30.27 Aligned_cols=30 Identities=13% Similarity=0.126 Sum_probs=25.4
Q ss_pred EEEeCCcch--HHHHHHHhcCCCeEEEeccCC
Q 007121 108 LLISGDRDF--SNALHQLRMRRYNILLAQPHK 137 (617)
Q Consensus 108 MLISGDrDF--S~aLs~LR~RGYNILLAqP~~ 137 (617)
|||||-..| +.++..|..+||.|+.+....
T Consensus 3 vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~ 34 (321)
T d1rpna_ 3 ALVTGITGQDGAYLAKLLLEKGYRVHGLVARR 34 (321)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred EEEECCCCHHHHHHHHHHHHCcCEEEEEECCC
Confidence 799999999 568888989999999886543
No 10
>d1k92a1 c.26.2.1 (A:1-188) Argininosuccinate synthetase, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=24.71 E-value=22 Score=28.00 Aligned_cols=28 Identities=25% Similarity=0.113 Sum_probs=25.5
Q ss_pred EEEEeCCcchHHHHHHHhcCCCeEEEec
Q 007121 107 YLLISGDRDFSNALHQLRMRRYNILLAQ 134 (617)
Q Consensus 107 IMLISGDrDFS~aLs~LR~RGYNILLAq 134 (617)
+|-+||-.|=+.+|+.|++.||.|+.+.
T Consensus 14 ~vA~SGGvDSsvll~lL~~~g~~v~~~~ 41 (188)
T d1k92a1 14 GIAFSGGLDTSAALLWMRQKGAVPYAYT 41 (188)
T ss_dssp EEECCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEeCCCHHHHHHHHHHHHcCCcCeEEe
Confidence 5778999999999999999999999875
No 11
>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}
Probab=24.36 E-value=28 Score=30.34 Aligned_cols=27 Identities=26% Similarity=0.361 Sum_probs=23.9
Q ss_pred EEEeCCcch--HHHHHHHhcCCCeEEEec
Q 007121 108 LLISGDRDF--SNALHQLRMRRYNILLAQ 134 (617)
Q Consensus 108 MLISGDrDF--S~aLs~LR~RGYNILLAq 134 (617)
|||||-..| +.++..|.++||+|+.+.
T Consensus 3 ILVTGatGfIGs~lv~~Ll~~g~~V~~id 31 (338)
T d1orra_ 3 LLITGGCGFLGSNLASFALSQGIDLIVFD 31 (338)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEECCCcHHHHHHHHHHHHCcCEEEEEE
Confidence 689999999 578999999999999874
No 12
>d1kjna_ c.115.1.1 (A:) Hypothetical protein MTH777 (MT0777) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=23.93 E-value=20 Score=31.81 Aligned_cols=40 Identities=13% Similarity=0.149 Sum_probs=30.7
Q ss_pred ceEEEEeCCc-------chHHHHHHHhcCCCeEEEeccCCCChhHHh
Q 007121 105 SNYLLISGDR-------DFSNALHQLRMRRYNILLAQPHKASAPLVA 144 (617)
Q Consensus 105 ANIMLISGDr-------DFS~aLs~LR~RGYNILLAqP~~aS~~L~a 144 (617)
+.+|||-|-+ -|-+++++|+.+|++|+++..+.+...|..
T Consensus 2 ~k~lilLGCPe~Pvq~~~~lyl~~~Lk~kG~~v~Va~npAA~kLiev 48 (152)
T d1kjna_ 2 GKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQV 48 (152)
T ss_dssp CEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred ccEEEEecCCCCcchhHHHHHHHHHHHhcCCceEEecCHHHHhHhhh
Confidence 4578888875 478899999999999999986555443433
No 13
>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}
Probab=22.92 E-value=23 Score=30.29 Aligned_cols=27 Identities=26% Similarity=0.535 Sum_probs=22.6
Q ss_pred EEEEeCCcch--HHHHHHHhcCCCe-EEEe
Q 007121 107 YLLISGDRDF--SNALHQLRMRRYN-ILLA 133 (617)
Q Consensus 107 IMLISGDrDF--S~aLs~LR~RGYN-ILLA 133 (617)
+|||||-..| +.++..|.++||+ |+.+
T Consensus 1 ~ILITGgsGfIGs~lv~~L~~~g~~~V~~~ 30 (307)
T d1eq2a_ 1 MIIVTGGAGFIGSNIVKALNDKGITDILVV 30 (307)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEE
T ss_pred CEEEecCccHHHHHHHHHHHhCCCCeEEEE
Confidence 5899999999 6788999999975 6655
No 14
>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}
Probab=22.71 E-value=32 Score=31.37 Aligned_cols=30 Identities=20% Similarity=0.135 Sum_probs=26.4
Q ss_pred eEEEEeCCcch--HHHHHHHhcCCCeEEEecc
Q 007121 106 NYLLISGDRDF--SNALHQLRMRRYNILLAQP 135 (617)
Q Consensus 106 NIMLISGDrDF--S~aLs~LR~RGYNILLAqP 135 (617)
.++||||-..| +.++..|.++||.|+.+..
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r 33 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKR 33 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence 47999999999 6789999999999998864
No 15
>d1jyea_ c.93.1.1 (A:) Lac-repressor (lacR) core (C-terminal domain) {Escherichia coli [TaxId: 562]}
Probab=22.28 E-value=40 Score=29.18 Aligned_cols=17 Identities=18% Similarity=0.108 Sum_probs=13.1
Q ss_pred hhHHHHHHHHHHhcCcc
Q 007121 48 HTIAQNISSALVKMNYC 64 (617)
Q Consensus 48 ~~Va~nIr~ALrklGY~ 64 (617)
..++..|++++++.||.
T Consensus 16 ~~i~~~i~~~a~~~Gy~ 32 (271)
T d1jyea_ 16 SQIVAAILSRADQLGAS 32 (271)
T ss_dssp HHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHcCCE
Confidence 46778888888888884
No 16
>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=21.79 E-value=50 Score=29.60 Aligned_cols=27 Identities=19% Similarity=0.372 Sum_probs=24.2
Q ss_pred EEEeCCcch--HHHHHHHhcCCCeEEEec
Q 007121 108 LLISGDRDF--SNALHQLRMRRYNILLAQ 134 (617)
Q Consensus 108 MLISGDrDF--S~aLs~LR~RGYNILLAq 134 (617)
|||||-..| +.++..|..+||.|+.+.
T Consensus 18 ILVTGgsGfIGs~lv~~L~~~g~~V~~~d 46 (363)
T d2c5aa1 18 ISITGAGGFIASHIARRLKHEGHYVIASD 46 (363)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEECCCCHHHHHHHHHHHHCcCEEEEEe
Confidence 899999999 578999999999999874
No 17
>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=21.47 E-value=37 Score=29.89 Aligned_cols=30 Identities=20% Similarity=0.070 Sum_probs=25.9
Q ss_pred eEEEEeCCcch--HHHHHHHhcCCCeEEEecc
Q 007121 106 NYLLISGDRDF--SNALHQLRMRRYNILLAQP 135 (617)
Q Consensus 106 NIMLISGDrDF--S~aLs~LR~RGYNILLAqP 135 (617)
..+||||-..| +.++..|-.+||+|+.+..
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r 33 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIR 33 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEEC
Confidence 36899999999 5688999999999998764
No 18
>d1ztpa1 d.86.1.2 (A:17-250) Basophilic leukemia expressed protein BLES03 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.05 E-value=22 Score=33.29 Aligned_cols=62 Identities=24% Similarity=0.266 Sum_probs=46.1
Q ss_pred CCCCCCCccchhhHHHHHHHHHhhhhccccCCCCccccchhhcCCCCCCCchHHHHHHHHHHhhHHHHhhcCCcceeecC
Q 007121 430 TQGRLTPSEYVQGLIGVILLALNTLKIERVVPSEANITDCIRYGEPKHRNTDVRKALNCAIEQHMVIKRSLGALPLYVPK 509 (617)
Q Consensus 430 ~~g~~~~s~~~qgli~~il~al~~lk~eki~pte~ni~dcirygd~~~~~~dvkkale~ai~~~~vv~~~~g~~~l~~~k 509 (617)
.+|..+.++++++|.. |++.|+++- |-.-+....++|.++.-+ -|+--||+..
T Consensus 67 ~~~~~p~~~d~~~L~~----a~e~l~~~g-------------------Rk~t~~~l~~LA~~~~v~----sGKWmif~~p 119 (234)
T d1ztpa1 67 GQGYSPNSGDVQGLQA----AWEALQTSG-------------------RPITPGTLRQLAITHHVL----SGKWLMHLAP 119 (234)
T ss_dssp CTTCCCCCCCHHHHHH----HHHHHHHHC-------------------CCCCHHHHHHHHHHHTCC----CEEEEEEECS
T ss_pred CCCCCCCcchHHHHHH----HHHHHHhcc-------------------ccccHHHHHHHHHHcCce----eeeeEEecCc
Confidence 6778888899999984 788777732 556667788888887643 6888888753
Q ss_pred ---CCcceeeec
Q 007121 510 ---NEKLWNCEN 518 (617)
Q Consensus 510 ---ne~lwkcvn 518 (617)
=+.+|++|-
T Consensus 120 ~d~VD~~W~~VA 131 (234)
T d1ztpa1 120 GFKLDHAWAGIA 131 (234)
T ss_dssp SHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 467888764
No 19
>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.86 E-value=38 Score=30.25 Aligned_cols=29 Identities=28% Similarity=0.271 Sum_probs=25.5
Q ss_pred EEEEeCCcch--HHHHHHHhcCCCeEEEecc
Q 007121 107 YLLISGDRDF--SNALHQLRMRRYNILLAQP 135 (617)
Q Consensus 107 IMLISGDrDF--S~aLs~LR~RGYNILLAqP 135 (617)
.+||||-..| +.++..|..+||+|+.+..
T Consensus 18 ~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~ 48 (341)
T d1sb8a_ 18 VWLITGVAGFIGSNLLETLLKLDQKVVGLDN 48 (341)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence 6899999999 5688999999999999864
No 20
>d2c5sa1 c.26.2.6 (A:174-391) Thiamine biosynthesis protein ThiI, C-terminal domain {Bacillus anthracis [TaxId: 1392]}
Probab=20.71 E-value=28 Score=29.25 Aligned_cols=29 Identities=21% Similarity=0.114 Sum_probs=25.7
Q ss_pred eEEEEeCCcchHHHHHHHhcCCCeEEEec
Q 007121 106 NYLLISGDRDFSNALHQLRMRRYNILLAQ 134 (617)
Q Consensus 106 NIMLISGDrDFS~aLs~LR~RGYNILLAq 134 (617)
-+|++||-.|=+.++..|..+||+|+.++
T Consensus 7 vvv~~SGG~DS~vla~ll~k~g~~v~av~ 35 (218)
T d2c5sa1 7 VMVLLSGGIDSPVAAYLTMKRGVSVEAVH 35 (218)
T ss_dssp EEEECCSSSHHHHHHHHHHHBTEEEEEEE
T ss_pred EEEEecCcHHHHHHHHHHHHcCCeEEEEE
Confidence 47899999998888888888999999886
No 21
>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}
Probab=20.65 E-value=51 Score=29.62 Aligned_cols=33 Identities=21% Similarity=0.381 Sum_probs=27.2
Q ss_pred CCceEEEEeCCcch--HHHHHHHhcCCCeEEEecc
Q 007121 103 APSNYLLISGDRDF--SNALHQLRMRRYNILLAQP 135 (617)
Q Consensus 103 pPANIMLISGDrDF--S~aLs~LR~RGYNILLAqP 135 (617)
++-..|||||-..| +.++..|-.+||.|+.+..
T Consensus 9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR 43 (342)
T d1y1pa1 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTAR 43 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeC
Confidence 44579999999999 6788899999999986543
No 22
>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.49 E-value=39 Score=29.89 Aligned_cols=29 Identities=21% Similarity=0.086 Sum_probs=25.1
Q ss_pred EEEEeCCcch--HHHHHHHhcCCCeEEEecc
Q 007121 107 YLLISGDRDF--SNALHQLRMRRYNILLAQP 135 (617)
Q Consensus 107 IMLISGDrDF--S~aLs~LR~RGYNILLAqP 135 (617)
|+||||-..| +.++..|..+||.|+.+..
T Consensus 3 I~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r 33 (347)
T d1t2aa_ 3 VALITGITGQDGSYLAEFLLEKGYEVHGIVR 33 (347)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEecCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence 5699999999 5788999999999998764
Done!