Query 007123
Match_columns 617
No_of_seqs 332 out of 1011
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 17:45:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007123.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007123hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hve_A Gigaxonin; ubiquitin, c 100.0 4.1E-30 1.4E-34 259.3 7.7 235 16-320 14-256 (256)
2 3i3n_A Kelch-like protein 11; 100.0 1.1E-29 3.7E-34 259.5 9.8 242 15-325 14-268 (279)
3 3htm_A Speckle-type POZ protei 99.9 9.6E-22 3.3E-26 185.5 10.6 130 18-164 19-149 (172)
4 2ppi_A Gigaxonin; BTB domain, 99.9 4.9E-22 1.7E-26 185.0 7.8 114 14-135 28-144 (144)
5 2if5_A Zinc finger and BTB dom 99.9 1.1E-21 3.7E-26 175.8 9.6 112 16-135 8-120 (120)
6 4eoz_A Speckle-type POZ protei 99.8 2.2E-22 7.5E-27 184.8 4.6 130 18-164 10-140 (145)
7 1buo_A POZ domain, protein (pr 99.8 1.6E-21 5.5E-26 175.5 9.8 110 16-137 11-120 (121)
8 3b84_A Zinc finger and BTB dom 99.8 7.6E-22 2.6E-26 177.3 7.6 111 16-137 7-117 (119)
9 2vpk_A Myoneurin; transcriptio 99.8 1.6E-21 5.5E-26 173.9 9.3 109 17-136 6-116 (116)
10 2q81_A MIZ-1 protein; BTB/POZ 99.8 1.6E-21 5.6E-26 175.1 8.8 109 15-135 9-117 (119)
11 1r29_A B-cell lymphoma 6 prote 99.8 3.2E-21 1.1E-25 174.6 10.4 113 15-136 11-125 (127)
12 2z8h_A Transcription regulator 99.8 2.9E-21 9.9E-26 177.9 9.7 118 14-140 17-135 (138)
13 2yy9_A Zinc finger and BTB dom 99.8 1.1E-21 3.9E-26 180.3 6.6 113 16-139 8-120 (135)
14 3ga1_A Nucleus accumbens-assoc 99.8 1.6E-21 5.3E-26 177.5 5.6 112 15-137 15-127 (129)
15 2vkp_A BTB/POZ domain-containi 99.8 4.6E-21 1.6E-25 168.5 7.6 102 28-138 3-109 (109)
16 3ohu_A Transcription regulator 99.8 1.8E-21 6.2E-26 175.8 4.4 111 15-134 14-125 (125)
17 3m5b_A Zinc finger and BTB dom 99.8 8.3E-21 2.8E-25 171.6 5.7 103 17-137 16-118 (119)
18 2ihc_A Transcription regulator 99.8 5.5E-21 1.9E-25 172.9 3.8 111 16-135 12-123 (124)
19 3hqi_A Speckle-type POZ protei 99.8 1.7E-19 5.9E-24 186.5 9.7 138 19-173 160-301 (312)
20 3fkc_A Transcriptional regulat 99.8 5.7E-19 1.9E-23 158.3 8.5 98 16-119 14-112 (116)
21 2ast_A S-phase kinase-associat 99.4 2.6E-13 9E-18 128.5 6.9 95 36-139 3-127 (159)
22 4ajy_C Transcription elongatio 99.2 3.4E-11 1.2E-15 105.0 6.4 79 36-117 4-97 (97)
23 1fs1_B SKP1, cyclin A/CDK2-ass 99.1 1.2E-10 4.1E-15 108.3 7.4 92 36-139 4-122 (141)
24 2p1m_A SKP1-like protein 1A; F 98.9 1.7E-10 5.7E-15 109.5 -0.8 92 36-138 6-125 (160)
25 3v7d_A Suppressor of kinetocho 98.3 6.8E-07 2.3E-11 85.5 7.3 95 35-138 8-133 (169)
26 1hv2_A Elongin C, ELC1; protei 98.3 4.5E-07 1.6E-11 79.4 5.4 79 36-117 6-99 (99)
27 2fnj_C Transcription elongatio 98.3 4.4E-07 1.5E-11 78.9 4.4 79 36-117 3-96 (96)
28 1vcb_B Protein (elongin C); tu 97.7 2E-05 6.8E-10 70.5 3.8 80 35-117 18-112 (112)
29 3drz_A BTB/POZ domain-containi 97.4 0.00033 1.1E-08 61.8 7.8 93 35-136 7-106 (107)
30 2eqx_A Kelch repeat and BTB do 97.1 9.1E-05 3.1E-09 64.9 0.3 89 149-283 10-98 (105)
31 3drx_A BTB/POZ domain-containi 95.8 0.016 5.4E-07 56.9 7.3 94 35-137 13-113 (202)
32 3kvt_A Potassium channel prote 92.6 0.051 1.8E-06 48.5 2.5 81 36-119 7-91 (115)
33 1s1g_A Potassium voltage-gated 91.8 0.14 4.7E-06 46.4 4.3 80 34-119 13-98 (124)
34 1t1d_A Protein (potassium chan 89.0 0.3 1E-05 42.5 3.8 81 36-119 3-88 (100)
35 2nz0_B Potassium voltage-gated 87.5 0.23 7.8E-06 45.9 2.2 81 33-119 34-120 (140)
36 1nn7_A Potassium channel KV4.2 86.3 0.16 5.3E-06 44.6 0.3 78 36-119 2-85 (105)
37 2yy0_A C-MYC-binding protein; 73.9 2.8 9.6E-05 32.4 3.6 30 535-564 20-49 (53)
38 1deb_A APC protein, adenomatou 68.3 6.3 0.00021 30.1 4.2 36 529-564 12-47 (54)
39 1pd7_B MAD1; PAH2, SIN3, eukar 59.1 2 6.7E-05 28.4 -0.0 17 103-119 3-19 (26)
40 2yy0_A C-MYC-binding protein; 54.7 14 0.00047 28.5 4.1 31 528-558 20-50 (53)
41 1vjh_A BET V I allergen family 46.7 13 0.00046 32.7 3.4 32 402-444 91-122 (122)
42 3vmx_A Voltage-gated hydrogen 41.8 24 0.00081 26.7 3.4 33 535-567 5-37 (48)
43 2r9r_B Paddle chimera voltage 34.0 25 0.00085 38.6 3.7 82 35-119 53-139 (514)
44 2eqx_A Kelch repeat and BTB do 33.6 26 0.00088 29.8 3.0 36 97-138 5-40 (105)
45 3vp9_A General transcriptional 29.0 29 0.001 29.7 2.5 25 541-565 50-74 (92)
46 3b0b_C CENP-X, centromere prot 29.0 53 0.0018 27.4 4.0 43 344-402 6-48 (81)
47 1dip_A Delta-sleep-inducing pe 26.7 39 0.0013 27.8 2.7 34 531-564 12-45 (78)
48 3he5_A Synzip1; heterodimeric 22.6 80 0.0027 23.0 3.4 38 527-564 10-47 (49)
49 4dra_E Centromere protein X; D 21.4 65 0.0022 27.1 3.2 43 344-402 10-52 (84)
50 1ci6_A Transcription factor AT 21.0 95 0.0033 24.3 3.9 34 531-564 27-60 (63)
51 3qh9_A Liprin-beta-2; coiled-c 20.6 89 0.0031 26.1 3.8 26 532-557 17-42 (81)
52 4dzn_A Coiled-coil peptide CC- 20.4 1.4E+02 0.0048 20.1 3.9 25 530-554 5-29 (33)
53 1e09_A PRU AV 1; allergen, maj 20.0 80 0.0027 28.7 3.9 34 403-444 123-156 (159)
No 1
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.96 E-value=4.1e-30 Score=259.35 Aligned_cols=235 Identities=12% Similarity=0.131 Sum_probs=177.4
Q ss_pred hhhHHHHHhHHHhhcCCCeeEEEEECCeEeeecccccccccHHHHHhhccC-C--CCCcccccccCCCCCHHHHHHHHHH
Q 007123 16 LAKSSRQRCNEWIFRDVPSDITIDVNGGTFALHKFPLVSRSGRIRKLVAEH-R--DSDISRIELLNLPGGAETFELAAKF 92 (617)
Q Consensus 16 ~~~~~~~~~~~w~~~~~~~DV~v~V~g~~F~lHK~vLas~S~yfr~lf~~~-~--e~~~~~v~L~~~pgGae~felv~~F 92 (617)
-.+..++.++.++.++.+|||+|.|||+.|++||.+|+++|+||++||+.. . ++....|.|++++ +++|+.+++|
T Consensus 14 ~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~--~~~f~~ll~~ 91 (256)
T 3hve_A 14 HAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDY 91 (256)
T ss_dssp THHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCC--HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCC--HHHHHHHHhh
Confidence 345678889999999999999999999999999999999999999999874 3 5667789999987 6999999999
Q ss_pred HhCCCccCChhhHhHHHhhhcccccccccccchHHHHHHHHHHHHhhhhhhhHHHHHhhhhhHHHHHHhhchhHHHHHHH
Q 007123 93 CYGINFEITSANVAQLCCVSDYLEMTEDFSKDNLGSRAEEYIDCIVCKNLEMCVEVLQQCESLLPLADELKIVSRCIDAV 172 (617)
Q Consensus 93 cY~~~i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v~~sw~~si~~L~sC~~L~~~Ae~~~Iv~RcidsL 172 (617)
+|||++.|+.+||..++.||++|||++ |.+.|+.||.+.+.. .||..++.+|+.+++ +.|
T Consensus 92 ~Yt~~~~i~~~~v~~ll~~A~~l~i~~------l~~~c~~~L~~~l~~---------~n~~~i~~~A~~~~~-----~~L 151 (256)
T 3hve_A 92 IFSGQIRLNEDTIQDVVQAADLLLLTD------LKTLCCEFLEGCIAA---------ENCIGIRDFALHYCL-----HHV 151 (256)
T ss_dssp HHHSCCCCC-CCHHHHHHHHHHHTCHH------HHHHHHHHHHHTCCS---------STTHHHHHHHHHTTC-----HHH
T ss_pred ccCCCCcccHhHHHHHHHHHHHHChHH------HHHHHHHHHHhhCCH---------hhHHHHHHHHHHcCc-----HHH
Confidence 999999999999999999999999999 999999999998844 599999999999984 333
Q ss_pred HHHH----hhhhccccccccccccccccccCCCCccCCcccccccccCChHHHHHHHHhHhhCCCChhhHHHHHHHHHHh
Q 007123 173 ASKA----CAEQIASSFSRLEYSSSGRLHMNKHTKCEGDWWIEDLSVLRFDLYQRVMTAMKCRGVRPESIGASLMNYAQK 248 (617)
Q Consensus 173 A~kA----c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dWW~EDl~~L~~d~f~rVI~am~~~g~~~e~I~~al~~Ya~k 248 (617)
..++ +.+.. ..+-.++|..|+.+.+..++........+|+.|+++++.|+++
T Consensus 152 ~~~~~~~i~~~f~------------------------~v~~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~ 207 (256)
T 3hve_A 152 HYLATEYLETHFR------------------------DVSSTEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAH 207 (256)
T ss_dssp HHHHHHHHHHHHH------------------------HHTTCHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC
T ss_pred HHHHHHHHHHHHH------------------------HHhCCcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHc
Confidence 3332 11111 1123678999999999988888776666789999999999987
Q ss_pred hhcccccCCCCCCcccccCCCCCcchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhccCC-hHHHHHHHH
Q 007123 249 ELTKKSSLWNPTTQAKVDLVSVPSGHERQVVETIIGLLPVEKLAVPINFLFGLLRSAVMLDCT-VACRLDLER 320 (617)
Q Consensus 249 ~l~~~~~~~~~~~~~~~~~~~~~~~~~r~LLEtIv~lLP~~k~~vs~~fL~~LLr~a~~L~as-~~Cr~~LEk 320 (617)
..+.+. .....|++.|+ + +.+|..||...++...++..+ +.|+..|++
T Consensus 208 ~~~~R~------------------~~~~~ll~~VR--f----~~l~~~~l~~~v~~~~l~~~~~~~c~~ll~~ 256 (256)
T 3hve_A 208 DTEIRK------------------VHMKDVMSALW--V----SGLDSSYLREQMLNEPLVREIVKECSNIPLS 256 (256)
T ss_dssp --CCST------------------TTHHHHHHHHH--H----HTTCC-CHHHHHHTSTTHHHHHCC-------
T ss_pred CHHHHH------------------HHHHHHHHhCC--C----CCCCHHHHHHHHhcChHHHhhHHHHHHHhhC
Confidence 755331 45678999999 4 478999999999999999998 789998875
No 2
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.96 E-value=1.1e-29 Score=259.54 Aligned_cols=242 Identities=14% Similarity=0.208 Sum_probs=195.7
Q ss_pred chhhHHHHHhHHHhhcCCCeeEEEEEC---CeEeeecccccccccHHHHHhhccC-CCCCccccccc------CCCCCHH
Q 007123 15 SLAKSSRQRCNEWIFRDVPSDITIDVN---GGTFALHKFPLVSRSGRIRKLVAEH-RDSDISRIELL------NLPGGAE 84 (617)
Q Consensus 15 ~~~~~~~~~~~~w~~~~~~~DV~v~V~---g~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~v~L~------~~pgGae 84 (617)
.-.+..++++++++.+|.+|||+|.|| |+.|++||.+|+++|+||++||++. +|+....|.|+ +++ ++
T Consensus 14 ~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~--~~ 91 (279)
T 3i3n_A 14 SHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPE--PD 91 (279)
T ss_dssp THHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSC--HH
T ss_pred hHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCC--HH
Confidence 345678889999999999999999998 9999999999999999999999975 67777889998 554 79
Q ss_pred HHHHHHHHHhCCCccCChhhHhHHHhhhcccccccccccchHHHHHHHHHHHHhhhhhhhHHHHHhhhhhHHHHHHhhch
Q 007123 85 TFELAAKFCYGINFEITSANVAQLCCVSDYLEMTEDFSKDNLGSRAEEYIDCIVCKNLEMCVEVLQQCESLLPLADELKI 164 (617)
Q Consensus 85 ~felv~~FcY~~~i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v~~sw~~si~~L~sC~~L~~~Ae~~~I 164 (617)
+|+.+++|+|||++.|+.+||..|+.||++|+|++ |.+.|++||.+.+.. .||..++.+|+.+++
T Consensus 92 ~f~~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~------L~~~c~~~L~~~l~~---------~n~~~i~~~A~~~~~ 156 (279)
T 3i3n_A 92 TVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIR------LKEFCGEFLKKKLHL---------SNCVAIHSLAHMYTL 156 (279)
T ss_dssp HHHHHHHHHHHSEEEEETTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHCCT---------TTHHHHHHHHHHTTC
T ss_pred HHHHHHHhhCcCCcccCHHHHHHHHHHHHHHCcHH------HHHHHHHHHHHcCCc---------chHHHHHHHHHHcCc
Confidence 99999999999999999999999999999999999 999999999998844 699999999999984
Q ss_pred ---hHHHHHHHHHHHhhhhccccccccccccccccccCCCCccCCcccccccccCChHHHHHHHHhHhhCCCChhhHHHH
Q 007123 165 ---VSRCIDAVASKACAEQIASSFSRLEYSSSGRLHMNKHTKCEGDWWIEDLSVLRFDLYQRVMTAMKCRGVRPESIGAS 241 (617)
Q Consensus 165 ---v~RcidsLA~kAc~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dWW~EDl~~L~~d~f~rVI~am~~~g~~~e~I~~a 241 (617)
...|.+-|+. +.. ..+-.++|..|+.+.+..+++.......+|+.|+++
T Consensus 157 ~~L~~~~~~~i~~----~f~------------------------~v~~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~a 208 (279)
T 3i3n_A 157 SQLALKAADMIRR----NFH------------------------KVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFET 208 (279)
T ss_dssp HHHHHHHHHHHHH----THH------------------------HHTTSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHH
T ss_pred HHHHHHHHHHHHH----HHH------------------------HHhcCcChhcCCHHHHHHHhcCcCCCCCCHHHHHHH
Confidence 2223222221 111 123367899999999888877766666679999999
Q ss_pred HHHHHHhhhcccccCCCCCCcccccCCCCCcchhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhccCChHHHHHHHHH
Q 007123 242 LMNYAQKELTKKSSLWNPTTQAKVDLVSVPSGHERQVVETIIGLLPVEKLAVPINFLFGLLRSAVMLDCTVACRLDLERR 321 (617)
Q Consensus 242 l~~Ya~k~l~~~~~~~~~~~~~~~~~~~~~~~~~r~LLEtIv~lLP~~k~~vs~~fL~~LLr~a~~L~as~~Cr~~LEkr 321 (617)
++.|+++..+.+. .....|++.|+ + +.+|..||..+++....+..++.|+..|.+.
T Consensus 209 v~~W~~~~~~~r~------------------~~~~~ll~~VR--f----~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea 264 (279)
T 3i3n_A 209 VLKWVQRNAEERE------------------RYFEELFKLLR--L----SQMKPTYLTRHVKPERLVANNEVCVKLVADA 264 (279)
T ss_dssp HHHHHHTTHHHHT------------------TTHHHHHTTSC--G----GGSCHHHHHHTTTTSHHHHTCHHHHHHHHHH
T ss_pred HHHHHHcCHHHHH------------------HHHHHHHHhcC--C----CCCCHHHHHHHhhccchhcCCHHHHHHHHHH
Confidence 9999998766432 45667888888 5 4799999999999999999999999988776
Q ss_pred HHhh
Q 007123 322 IASQ 325 (617)
Q Consensus 322 Ig~q 325 (617)
.--+
T Consensus 265 ~~~~ 268 (279)
T 3i3n_A 265 VERH 268 (279)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 5433
No 3
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.86 E-value=9.6e-22 Score=185.55 Aligned_cols=130 Identities=18% Similarity=0.184 Sum_probs=119.4
Q ss_pred hHHHHHhHHHhhcCCCeeEEEEECCeEeeecccccccccHHHHHhhccC-CCCCcccccccCCCCCHHHHHHHHHHHhCC
Q 007123 18 KSSRQRCNEWIFRDVPSDITIDVNGGTFALHKFPLVSRSGRIRKLVAEH-RDSDISRIELLNLPGGAETFELAAKFCYGI 96 (617)
Q Consensus 18 ~~~~~~~~~w~~~~~~~DV~v~V~g~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~v~L~~~pgGae~felv~~FcY~~ 96 (617)
+.....++.++.++.+|||+|.|+|+.|++||.+|+++|+||++||... .++....|.|++++ +++|+.+++|+|++
T Consensus 19 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~l~~~Yt~ 96 (172)
T 3htm_A 19 CRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTG 96 (172)
T ss_dssp CCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSC--HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCC--HHHHHHHHHHHhCC
Confidence 3466778888889999999999999999999999999999999999975 66777789999987 69999999999999
Q ss_pred CccCChhhHhHHHhhhcccccccccccchHHHHHHHHHHHHhhhhhhhHHHHHhhhhhHHHHHHhhch
Q 007123 97 NFEITSANVAQLCCVSDYLEMTEDFSKDNLGSRAEEYIDCIVCKNLEMCVEVLQQCESLLPLADELKI 164 (617)
Q Consensus 97 ~i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v~~sw~~si~~L~sC~~L~~~Ae~~~I 164 (617)
++.++.+|+..|+.+|++|+|++ |.+.|+.||.+.+. ..||..++.+|+.+++
T Consensus 97 ~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~l~---------~~n~~~~~~~A~~~~~ 149 (172)
T 3htm_A 97 KAPNLDKMADDLLAAADKYALER------LKVMCEDALCSNLS---------VENAAEILILADLHSA 149 (172)
T ss_dssp CCTTGGGTHHHHHHHHHHTTCHH------HHHHHHHHHHHTCC---------TTTHHHHHHHHHHTTC
T ss_pred CCCCcHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHhCC---------HHHHHHHHHHHHHhCc
Confidence 99999999999999999999999 99999999999884 4699999999999884
No 4
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.85 E-value=4.9e-22 Score=184.98 Aligned_cols=114 Identities=15% Similarity=0.200 Sum_probs=99.9
Q ss_pred cchhhHHHHHhHHHhhcCCCeeEEEEECCeEeeecccccccccHHHHHhhccC-C--CCCcccccccCCCCCHHHHHHHH
Q 007123 14 LSLAKSSRQRCNEWIFRDVPSDITIDVNGGTFALHKFPLVSRSGRIRKLVAEH-R--DSDISRIELLNLPGGAETFELAA 90 (617)
Q Consensus 14 ~~~~~~~~~~~~~w~~~~~~~DV~v~V~g~~F~lHK~vLas~S~yfr~lf~~~-~--e~~~~~v~L~~~pgGae~felv~ 90 (617)
..-.+..++.+++++.++.+|||+|.|+|+.|++||.+|+++|+||++||... . ++....|.|++++ +++|+.++
T Consensus 28 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~--~~~f~~lL 105 (144)
T 2ppi_A 28 PQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREIL 105 (144)
T ss_dssp TTHHHHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSC--HHHHHHHH
T ss_pred cchHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCC--HHHHHHHH
Confidence 34455677889999999999999999999999999999999999999999864 2 3566789999987 69999999
Q ss_pred HHHhCCCccCChhhHhHHHhhhcccccccccccchHHHHHHHHHH
Q 007123 91 KFCYGINFEITSANVAQLCCVSDYLEMTEDFSKDNLGSRAEEYID 135 (617)
Q Consensus 91 ~FcY~~~i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~ 135 (617)
+|+|+|++.++.+||..|+.||++|+|++ |++.|++||.
T Consensus 106 ~fiYtg~~~i~~~~v~~ll~~A~~l~i~~------L~~~C~~~L~ 144 (144)
T 2ppi_A 106 DYIFSGQIRLNEDTIQDVVQAADLLLLTD------LKTLCCEFLE 144 (144)
T ss_dssp HHHTTSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHTTC-
T ss_pred HHHhCCCCCCCHHHHHHHHHHHHHhCcHH------HHHHHHHHhC
Confidence 99999999999999999999999999999 9999999974
No 5
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.85 E-value=1.1e-21 Score=175.81 Aligned_cols=112 Identities=21% Similarity=0.274 Sum_probs=101.5
Q ss_pred hhhHHHHHhHHHhhcCCCeeEEEEECCeEeeecccccccccHHHHHhhccC-CCCCcccccccCCCCCHHHHHHHHHHHh
Q 007123 16 LAKSSRQRCNEWIFRDVPSDITIDVNGGTFALHKFPLVSRSGRIRKLVAEH-RDSDISRIELLNLPGGAETFELAAKFCY 94 (617)
Q Consensus 16 ~~~~~~~~~~~w~~~~~~~DV~v~V~g~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~v~L~~~pgGae~felv~~FcY 94 (617)
..+..++.+++++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. .++....|.|++++ +++|+.+++|+|
T Consensus 8 h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~ll~~~Y 85 (120)
T 2if5_A 8 HSSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVS--AEALTALMDFAY 85 (120)
T ss_dssp HHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSC--HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCC--HHHHHHHHHHHc
Confidence 356778889999999999999999999999999999999999999999975 56667789999987 699999999999
Q ss_pred CCCccCChhhHhHHHhhhcccccccccccchHHHHHHHHHH
Q 007123 95 GINFEITSANVAQLCCVSDYLEMTEDFSKDNLGSRAEEYID 135 (617)
Q Consensus 95 ~~~i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~ 135 (617)
|+++.++.+|+..|+.||++|+|++ |.+.|++||+
T Consensus 86 t~~~~~~~~~~~~ll~~A~~~~i~~------L~~~C~~~L~ 120 (120)
T 2if5_A 86 TATLTVSTANVGDILSAARLLEIPA------VSHVCADLLD 120 (120)
T ss_dssp HSCCCCCGGGHHHHHHHHHHTTCHH------HHHHHHHHHC
T ss_pred CCCCccCHHHHHHHHHHHHHhCCHH------HHHHHHHHhC
Confidence 9999999999999999999999999 9999999984
No 6
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.85 E-value=2.2e-22 Score=184.82 Aligned_cols=130 Identities=18% Similarity=0.181 Sum_probs=99.8
Q ss_pred hHHHHHhHHHhhcCCCeeEEEEECCeEeeecccccccccHHHHHhhccC-CCCCcccccccCCCCCHHHHHHHHHHHhCC
Q 007123 18 KSSRQRCNEWIFRDVPSDITIDVNGGTFALHKFPLVSRSGRIRKLVAEH-RDSDISRIELLNLPGGAETFELAAKFCYGI 96 (617)
Q Consensus 18 ~~~~~~~~~w~~~~~~~DV~v~V~g~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~v~L~~~pgGae~felv~~FcY~~ 96 (617)
+...+.++.++.++.+|||+|.|+|+.|++||.+|+++|+||++||... .++....|.|++++ +++|+.+++|+||+
T Consensus 10 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~~~~~l~~~Y~~ 87 (145)
T 4eoz_A 10 CRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTG 87 (145)
T ss_dssp CCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSC--HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCC--HHHHHHHHHhhccC
Confidence 3566788888889999999999999999999999999999999999875 45556789999987 69999999999999
Q ss_pred CccCChhhHhHHHhhhcccccccccccchHHHHHHHHHHHHhhhhhhhHHHHHhhhhhHHHHHHhhch
Q 007123 97 NFEITSANVAQLCCVSDYLEMTEDFSKDNLGSRAEEYIDCIVCKNLEMCVEVLQQCESLLPLADELKI 164 (617)
Q Consensus 97 ~i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v~~sw~~si~~L~sC~~L~~~Ae~~~I 164 (617)
++.++.+|+..|+.+|++|+|++ |.+.|+.||.+.+ ...||..++.+|+.|++
T Consensus 88 ~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~l---------~~~n~~~~l~~A~~~~~ 140 (145)
T 4eoz_A 88 KAPNLDKMADDLLAAADKYALER------LKVMCEDALCSNL---------SVENAAEILILADLHSA 140 (145)
T ss_dssp CCTTGGGTHHHHHHHHHHTTCHH------HHHHHHCC-------------------------------
T ss_pred ccCCcHHHHHHHHHHHHHhCHHH------HHHHHHHHHHHhC---------CHHHHHHHHHHHHHhCH
Confidence 99999999999999999999999 9999999999988 45799999999999884
No 7
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.85 E-value=1.6e-21 Score=175.53 Aligned_cols=110 Identities=17% Similarity=0.254 Sum_probs=102.4
Q ss_pred hhhHHHHHhHHHhhcCCCeeEEEEECCeEeeecccccccccHHHHHhhccCCCCCcccccccCCCCCHHHHHHHHHHHhC
Q 007123 16 LAKSSRQRCNEWIFRDVPSDITIDVNGGTFALHKFPLVSRSGRIRKLVAEHRDSDISRIELLNLPGGAETFELAAKFCYG 95 (617)
Q Consensus 16 ~~~~~~~~~~~w~~~~~~~DV~v~V~g~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~v~L~~~pgGae~felv~~FcY~ 95 (617)
.++...+.+++++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. ...|.|++++ +++|+.+++|+||
T Consensus 11 ~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~----~~~i~l~~~~--~~~f~~ll~~~Yt 84 (121)
T 1buo_A 11 HPTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN----SQHYTLDFLS--PKTFQQILEYAYT 84 (121)
T ss_dssp HHHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSC--HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC----CcEEEeCCCC--HHHHHHHHHhhcC
Confidence 456778899999999999999999999999999999999999999999863 4578899987 6999999999999
Q ss_pred CCccCChhhHhHHHhhhcccccccccccchHHHHHHHHHHHH
Q 007123 96 INFEITSANVAQLCCVSDYLEMTEDFSKDNLGSRAEEYIDCI 137 (617)
Q Consensus 96 ~~i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~ 137 (617)
|++.++.+|+..|+.||++|+|++ |.+.|++||.+.
T Consensus 85 g~~~~~~~~~~~ll~~A~~~~i~~------L~~~c~~~l~~~ 120 (121)
T 1buo_A 85 ATLQAKAEDLDDLLYAAEILEIEY------LEEQCLKMLETI 120 (121)
T ss_dssp SCCCCCGGGHHHHHHHHHHHTCHH------HHHHHHHHHHHH
T ss_pred CCcCCCHHHHHHHHHHHHHHCCHH------HHHHHHHHHHHh
Confidence 999999999999999999999999 999999999875
No 8
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.85 E-value=7.6e-22 Score=177.34 Aligned_cols=111 Identities=23% Similarity=0.149 Sum_probs=100.3
Q ss_pred hhhHHHHHhHHHhhcCCCeeEEEEECCeEeeecccccccccHHHHHhhccCCCCCcccccccCCCCCHHHHHHHHHHHhC
Q 007123 16 LAKSSRQRCNEWIFRDVPSDITIDVNGGTFALHKFPLVSRSGRIRKLVAEHRDSDISRIELLNLPGGAETFELAAKFCYG 95 (617)
Q Consensus 16 ~~~~~~~~~~~w~~~~~~~DV~v~V~g~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~v~L~~~pgGae~felv~~FcY~ 95 (617)
-.+..++.+++.+.++.+|||+|.|||+.|++||.+|+++|+||++||.... ...|.|++++ +++|+.+++|+||
T Consensus 7 h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~---~~~i~l~~~~--~~~f~~ll~~iYt 81 (119)
T 3b84_A 7 HSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS---GGSVVLPAGF--AEIFGLLLDFFYT 81 (119)
T ss_dssp HHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT---CCCEEECGGG--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC---CCeEEeCCCC--HHHHHHHHHHHcC
Confidence 3456778899999999999999999999999999999999999999998743 4578899987 6999999999999
Q ss_pred CCccCChhhHhHHHhhhcccccccccccchHHHHHHHHHHHH
Q 007123 96 INFEITSANVAQLCCVSDYLEMTEDFSKDNLGSRAEEYIDCI 137 (617)
Q Consensus 96 ~~i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~ 137 (617)
|++.++.+||..|+.||++|+|++ |.+.|++||.+.
T Consensus 82 g~~~~~~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~~ 117 (119)
T 3b84_A 82 GHLALTSGNRDQVLLAARELRVPE------AVELCQSFKPKT 117 (119)
T ss_dssp SCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHHCC---
T ss_pred CCCccCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHc
Confidence 999999999999999999999999 999999999864
No 9
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.85 E-value=1.6e-21 Score=173.86 Aligned_cols=109 Identities=20% Similarity=0.211 Sum_probs=99.1
Q ss_pred hhHHHHHhHHHhhcCCCeeEEEEECCeEeeecccccccccHHHHHhhccCCCCCccccccc--CCCCCHHHHHHHHHHHh
Q 007123 17 AKSSRQRCNEWIFRDVPSDITIDVNGGTFALHKFPLVSRSGRIRKLVAEHRDSDISRIELL--NLPGGAETFELAAKFCY 94 (617)
Q Consensus 17 ~~~~~~~~~~w~~~~~~~DV~v~V~g~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~v~L~--~~pgGae~felv~~FcY 94 (617)
.+..++.+++++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. ....|.|+ +++ +++|+.+++|+|
T Consensus 6 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~---~~~~i~l~~~~~~--~~~f~~ll~~~Y 80 (116)
T 2vpk_A 6 CEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST---SENNVFLDQSQVK--ADGFQKLLEFIY 80 (116)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC---CCSCEECCTTTCC--HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC---CCCeEEeecCCCC--HHHHHHHHHHHc
Confidence 45677889999999999999999999999999999999999999999875 24456666 876 699999999999
Q ss_pred CCCccCChhhHhHHHhhhcccccccccccchHHHHHHHHHHH
Q 007123 95 GINFEITSANVAQLCCVSDYLEMTEDFSKDNLGSRAEEYIDC 136 (617)
Q Consensus 95 ~~~i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~ 136 (617)
||++.++.+||..|+.||++|||++ |.+.|++||.+
T Consensus 81 t~~~~~~~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~ 116 (116)
T 2vpk_A 81 TGTLNLDSWNVKEIHQAADYLKVEE------VVTKCKIKMED 116 (116)
T ss_dssp HSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHC-
T ss_pred CCCcccCHHHHHHHHHHHHHhCCHH------HHHHHHHHHhC
Confidence 9999999999999999999999999 99999999863
No 10
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.84 E-value=1.6e-21 Score=175.15 Aligned_cols=109 Identities=18% Similarity=0.231 Sum_probs=100.2
Q ss_pred chhhHHHHHhHHHhhcCCCeeEEEEECCeEeeecccccccccHHHHHhhccCCCCCcccccccCCCCCHHHHHHHHHHHh
Q 007123 15 SLAKSSRQRCNEWIFRDVPSDITIDVNGGTFALHKFPLVSRSGRIRKLVAEHRDSDISRIELLNLPGGAETFELAAKFCY 94 (617)
Q Consensus 15 ~~~~~~~~~~~~w~~~~~~~DV~v~V~g~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~v~L~~~pgGae~felv~~FcY 94 (617)
.-.+..++.+++++.++.+|||+|.|+|+.|++||.+|+++|+||++||++. ...|.|++++ +++|+.+++|+|
T Consensus 9 ~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~i~l~~~~--~~~f~~ll~~~Y 82 (119)
T 2q81_A 9 QHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ----KDVVHLDISN--AAGLGQVLEFMY 82 (119)
T ss_dssp HHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC----CSGGGGGGCC--HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCC--HHHHHHHHHHHc
Confidence 3456678899999999999999999999999999999999999999999863 3468888876 699999999999
Q ss_pred CCCccCChhhHhHHHhhhcccccccccccchHHHHHHHHHH
Q 007123 95 GINFEITSANVAQLCCVSDYLEMTEDFSKDNLGSRAEEYID 135 (617)
Q Consensus 95 ~~~i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~ 135 (617)
||++.++.+||..|+.||++|+|++ |++.|++||.
T Consensus 83 tg~~~i~~~~~~~ll~~A~~l~i~~------L~~~C~~~l~ 117 (119)
T 2q81_A 83 TAKLSLSPENVDDVLAVATFLQMQD------IITACHALKS 117 (119)
T ss_dssp HSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHT
T ss_pred CCCCccCHHHHHHHHHHHHHhCCHH------HHHHHHHHHh
Confidence 9999999999999999999999999 9999999985
No 11
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.84 E-value=3.2e-21 Score=174.58 Aligned_cols=113 Identities=22% Similarity=0.371 Sum_probs=104.3
Q ss_pred chhhHHHHHhHHHhhcCCCeeEEEEECCeEeeecccccccccHHHHHhhccC-CCCCcccccc-cCCCCCHHHHHHHHHH
Q 007123 15 SLAKSSRQRCNEWIFRDVPSDITIDVNGGTFALHKFPLVSRSGRIRKLVAEH-RDSDISRIEL-LNLPGGAETFELAAKF 92 (617)
Q Consensus 15 ~~~~~~~~~~~~w~~~~~~~DV~v~V~g~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~v~L-~~~pgGae~felv~~F 92 (617)
.-.+..++.+++++.++.+|||+|.|+|+.|++||.+|+++|+||++||... .+ ....|.| ++++ +++|+.+++|
T Consensus 11 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~--~~~f~~ll~~ 87 (127)
T 1r29_A 11 RHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEIN--PEGFNILLDF 87 (127)
T ss_dssp THHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSC--HHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCC--HHHHHHHHHH
Confidence 3456778899999999999999999999999999999999999999999975 44 6678999 8887 6999999999
Q ss_pred HhCCCccCChhhHhHHHhhhcccccccccccchHHHHHHHHHHH
Q 007123 93 CYGINFEITSANVAQLCCVSDYLEMTEDFSKDNLGSRAEEYIDC 136 (617)
Q Consensus 93 cY~~~i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~ 136 (617)
+||+++.++.+|+..|+.||++|+|++ |.+.|+.||.+
T Consensus 88 ~Ytg~~~~~~~~~~~ll~~A~~~~i~~------L~~~c~~~l~~ 125 (127)
T 1r29_A 88 MYTSRLNLREGNIMAVMATAMYLQMEH------VVDTCRKFIKA 125 (127)
T ss_dssp HHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHT
T ss_pred HcCCCcCcCHHHHHHHHHHHHHhCCHH------HHHHHHHHHHh
Confidence 999999999999999999999999999 99999999975
No 12
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.84 E-value=2.9e-21 Score=177.87 Aligned_cols=118 Identities=18% Similarity=0.296 Sum_probs=105.2
Q ss_pred cchhhHHHHHhHHHhhcCCCeeEEEEECCeEeeecccccccccHHHHHhhccCCCCCccccccc-CCCCCHHHHHHHHHH
Q 007123 14 LSLAKSSRQRCNEWIFRDVPSDITIDVNGGTFALHKFPLVSRSGRIRKLVAEHRDSDISRIELL-NLPGGAETFELAAKF 92 (617)
Q Consensus 14 ~~~~~~~~~~~~~w~~~~~~~DV~v~V~g~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~v~L~-~~pgGae~felv~~F 92 (617)
..-.+..++.+++++.++.+|||+|.|+|+.|++||.+|+++|+||++||...... ...|.|+ +++ +++|+.+++|
T Consensus 17 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e-~~~i~l~~~v~--~~~~~~lL~~ 93 (138)
T 2z8h_A 17 SVHSTNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDA-ELTVTLPEEVT--VKGFEPLIQF 93 (138)
T ss_dssp SSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCT-TEEEECCTTSC--HHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCC-CceEEeCCCCC--HHHHHHHHHH
Confidence 34566778899999999999999999999999999999999999999999875221 2467885 776 6999999999
Q ss_pred HhCCCccCChhhHhHHHhhhcccccccccccchHHHHHHHHHHHHhhh
Q 007123 93 CYGINFEITSANVAQLCCVSDYLEMTEDFSKDNLGSRAEEYIDCIVCK 140 (617)
Q Consensus 93 cY~~~i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v~~ 140 (617)
+|||++.|+.+||..|+.||++|||++ |++.|++||.+.+..
T Consensus 94 ~Ytg~~~i~~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~~l~~ 135 (138)
T 2z8h_A 94 AYTAKLILSKDNVDEVCRCVEFLSVHN------IEESCFQFLKFKFLD 135 (138)
T ss_dssp HHHSCCCCCTTTHHHHHHHHHHHTCGG------GHHHHHHHTTCCCSC
T ss_pred hcCCCcccCHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHhccc
Confidence 999999999999999999999999999 999999999987743
No 13
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.84 E-value=1.1e-21 Score=180.30 Aligned_cols=113 Identities=21% Similarity=0.152 Sum_probs=99.5
Q ss_pred hhhHHHHHhHHHhhcCCCeeEEEEECCeEeeecccccccccHHHHHhhccCCCCCcccccccCCCCCHHHHHHHHHHHhC
Q 007123 16 LAKSSRQRCNEWIFRDVPSDITIDVNGGTFALHKFPLVSRSGRIRKLVAEHRDSDISRIELLNLPGGAETFELAAKFCYG 95 (617)
Q Consensus 16 ~~~~~~~~~~~w~~~~~~~DV~v~V~g~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~v~L~~~pgGae~felv~~FcY~ 95 (617)
-.+..++.+++++..+.+|||+|.|+|+.|++||.+|+++|+||++||.... ...|.|++++ +++|+.+++|+||
T Consensus 8 h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~---~~~i~l~~~~--~~~f~~lL~fiYt 82 (135)
T 2yy9_A 8 HSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT---GGSVVLPAGF--AEIFGLLLDFFYT 82 (135)
T ss_dssp HHHHHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC-------CCEEECGGG--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC---CCeEEeCCCC--HHHHHHHHHHHhC
Confidence 4466788999999999999999999999999999999999999999998643 4578899987 6999999999999
Q ss_pred CCccCChhhHhHHHhhhcccccccccccchHHHHHHHHHHHHhh
Q 007123 96 INFEITSANVAQLCCVSDYLEMTEDFSKDNLGSRAEEYIDCIVC 139 (617)
Q Consensus 96 ~~i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v~ 139 (617)
+++.|+.+||..|+.||++|+|++ |++.|++||.+.+.
T Consensus 83 g~~~i~~~~v~~ll~~A~~l~i~~------L~~~C~~~l~~~l~ 120 (135)
T 2yy9_A 83 GHLALTSGNRDQVLLAAKELRVPE------AVELCQSFQPQTSV 120 (135)
T ss_dssp SCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHHCCC----
T ss_pred CCCCCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHhcc
Confidence 999999999999999999999999 99999999998763
No 14
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.83 E-value=1.6e-21 Score=177.51 Aligned_cols=112 Identities=20% Similarity=0.359 Sum_probs=96.1
Q ss_pred chhhHHHHHhHHHhhcCCCeeEEEEECCeEeeecccccccccHHHHHhhccCCCCCccccccc-CCCCCHHHHHHHHHHH
Q 007123 15 SLAKSSRQRCNEWIFRDVPSDITIDVNGGTFALHKFPLVSRSGRIRKLVAEHRDSDISRIELL-NLPGGAETFELAAKFC 93 (617)
Q Consensus 15 ~~~~~~~~~~~~w~~~~~~~DV~v~V~g~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~v~L~-~~pgGae~felv~~Fc 93 (617)
...+..++.+++++.++.+|||+|.|+|+.|++||.+|+++|+||++||... ....|.|+ +++ +++|+.+++|+
T Consensus 15 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~---~~~~i~l~~~~~--~~~f~~ll~~i 89 (129)
T 3ga1_A 15 NFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS---RSAVVELPAAVQ--PQSFQQILSFC 89 (129)
T ss_dssp THHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC---CCSEEECCTTCC--HHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC---CCCEEEECCCCC--HHHHHHHHHHH
Confidence 3446678889999999999999999999999999999999999999999875 45678896 887 69999999999
Q ss_pred hCCCccCChhhHhHHHhhhcccccccccccchHHHHHHHHHHHH
Q 007123 94 YGINFEITSANVAQLCCVSDYLEMTEDFSKDNLGSRAEEYIDCI 137 (617)
Q Consensus 94 Y~~~i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~ 137 (617)
|+|++.++.+||..|+.||++|||++ |.+.|++||.+.
T Consensus 90 Ytg~~~i~~~~~~~ll~~A~~~~i~~------l~~~C~~~L~~~ 127 (129)
T 3ga1_A 90 YTGRLSMNVGDQDLLMYTAGFLQIQE------IMEKGTEFFLKV 127 (129)
T ss_dssp HHSEEECCTTTHHHHHHHHHHTTBTT------SSCC--------
T ss_pred hCCccccCHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHh
Confidence 99999999999999999999999999 999999999875
No 15
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.83 E-value=4.6e-21 Score=168.47 Aligned_cols=102 Identities=14% Similarity=0.242 Sum_probs=91.5
Q ss_pred hhcCCCeeEEEEECC----eEeeecccccccccHHHHHhhccC-CCCCcccccccCCCCCHHHHHHHHHHHhCCCccCCh
Q 007123 28 IFRDVPSDITIDVNG----GTFALHKFPLVSRSGRIRKLVAEH-RDSDISRIELLNLPGGAETFELAAKFCYGINFEITS 102 (617)
Q Consensus 28 ~~~~~~~DV~v~V~g----~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~v~L~~~pgGae~felv~~FcY~~~i~it~ 102 (617)
+.++.+|||+|.|+| +.|++||.+|+++|+||++||.+. .|+. ..|.|++++ +++|+.+++|+||+++.++.
T Consensus 3 ~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~--~~~f~~~l~~iYt~~~~~~~ 79 (109)
T 2vkp_A 3 FNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVE--PAAFLILLKYMYSDEIDLEA 79 (109)
T ss_dssp TTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSC--HHHHHHHHHHHHHCCCCCCT
T ss_pred ccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCC--HHHHHHHHHHHcCCCccCCH
Confidence 456899999999998 899999999999999999999975 5555 789999987 69999999999999999999
Q ss_pred hhHhHHHhhhcccccccccccchHHHHHHHHHHHHh
Q 007123 103 ANVAQLCCVSDYLEMTEDFSKDNLGSRAEEYIDCIV 138 (617)
Q Consensus 103 ~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v 138 (617)
+||..|+.+|++++|++ |.+.|++||.+.+
T Consensus 80 ~~~~~ll~~A~~~~~~~------L~~~c~~~l~~~l 109 (109)
T 2vkp_A 80 DTVLATLYAAKKYIVPA------LAKACVNFLETSL 109 (109)
T ss_dssp TTHHHHHHHHHHTTCHH------HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCcHH------HHHHHHHHHHhhC
Confidence 99999999999999999 9999999998753
No 16
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.83 E-value=1.8e-21 Score=175.76 Aligned_cols=111 Identities=16% Similarity=0.239 Sum_probs=100.0
Q ss_pred chhhHHHHHhHHHhhcCCCeeEEEEECCeEeeecccccccccHHHHHhhccCCCCCcccccccC-CCCCHHHHHHHHHHH
Q 007123 15 SLAKSSRQRCNEWIFRDVPSDITIDVNGGTFALHKFPLVSRSGRIRKLVAEHRDSDISRIELLN-LPGGAETFELAAKFC 93 (617)
Q Consensus 15 ~~~~~~~~~~~~w~~~~~~~DV~v~V~g~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~v~L~~-~pgGae~felv~~Fc 93 (617)
.-.+..++.+++++.++.+|||+|.|+|+.|++||.+|+++|+||++||...... ...|.|++ ++ +++|+.+++|+
T Consensus 14 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e-~~~i~l~~~~~--~~~f~~~l~~i 90 (125)
T 3ohu_A 14 VHCTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN-DLVVSLPEEVT--ARGFGPLLQFA 90 (125)
T ss_dssp SHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS-SCEEECCTTCC--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC-CcEEEeCCCCC--HHHHHHHHHhH
Confidence 3456678889999999999999999999999999999999999999999875322 55788887 77 69999999999
Q ss_pred hCCCccCChhhHhHHHhhhcccccccccccchHHHHHHHHH
Q 007123 94 YGINFEITSANVAQLCCVSDYLEMTEDFSKDNLGSRAEEYI 134 (617)
Q Consensus 94 Y~~~i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL 134 (617)
|||++.++.+||..|+.||++|+|++ |.+.|++||
T Consensus 91 Ytg~~~~~~~~v~~ll~~A~~l~i~~------L~~~C~~~L 125 (125)
T 3ohu_A 91 YTAKLLLSRENIREVIRCAEFLRMHN------LEDSCFSFL 125 (125)
T ss_dssp TTSEEEECTTTHHHHHHHHHHHTBSS------CTTSSCCCC
T ss_pred cCCceEECHHHHHHHHHHHHHhCCHH------HHHHHHHhC
Confidence 99999999999999999999999999 999998875
No 17
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.81 E-value=8.3e-21 Score=171.62 Aligned_cols=103 Identities=17% Similarity=0.149 Sum_probs=89.9
Q ss_pred hhHHHHHhHHHhhcCCCeeEEEEECCeEeeecccccccccHHHHHhhccCCCCCcccccccCCCCCHHHHHHHHHHHhCC
Q 007123 17 AKSSRQRCNEWIFRDVPSDITIDVNGGTFALHKFPLVSRSGRIRKLVAEHRDSDISRIELLNLPGGAETFELAAKFCYGI 96 (617)
Q Consensus 17 ~~~~~~~~~~w~~~~~~~DV~v~V~g~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~v~L~~~pgGae~felv~~FcY~~ 96 (617)
....++.++ +..+.+|||+|.|+|+.|++||.+|+++|+||++ ....|+|++++ +++|+.+++|+|||
T Consensus 16 ~~~~l~~l~--r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~--------~~~~i~l~~v~--~~~f~~ll~fiYtg 83 (119)
T 3m5b_A 16 SDRLVQLAA--RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR--------RGQWALGEGIS--PSTFAQLLNFVYGE 83 (119)
T ss_dssp TCHHHHHHH--HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC--------CEEEECCSSCC--HHHHHHHHHHHTTC
T ss_pred hHHHHHHHH--HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc--------CCCEEEeCCCC--HHHHHHHHHHHcCC
Confidence 345555565 4569999999999999999999999999999985 23578899987 69999999999999
Q ss_pred CccCChhhHhHHHhhhcccccccccccchHHHHHHHHHHHH
Q 007123 97 NFEITSANVAQLCCVSDYLEMTEDFSKDNLGSRAEEYIDCI 137 (617)
Q Consensus 97 ~i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~ 137 (617)
++.|+.+||..|+.||++|||+. |++.|++++.+.
T Consensus 84 ~~~i~~~~v~~ll~aA~~l~i~~------l~~~C~~~~~~~ 118 (119)
T 3m5b_A 84 SVELQPGELRPLQEAARALGVQS------LEEACWRARGDR 118 (119)
T ss_dssp CEEECGGGHHHHHHHHHHTTCHH------HHHHHHHHC---
T ss_pred CcCcCHHHHHHHHHHHHHhCCHH------HHHHHHHHHhhc
Confidence 99999999999999999999999 999999998763
No 18
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.81 E-value=5.5e-21 Score=172.92 Aligned_cols=111 Identities=21% Similarity=0.335 Sum_probs=98.4
Q ss_pred hhhHHHHHhHHHhhcCCCeeEEEEECCeEeeecccccccccHHHHHhhccCCCCCccccccc-CCCCCHHHHHHHHHHHh
Q 007123 16 LAKSSRQRCNEWIFRDVPSDITIDVNGGTFALHKFPLVSRSGRIRKLVAEHRDSDISRIELL-NLPGGAETFELAAKFCY 94 (617)
Q Consensus 16 ~~~~~~~~~~~w~~~~~~~DV~v~V~g~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~v~L~-~~pgGae~felv~~FcY 94 (617)
..+..++.+++++.++.+|||+|.|+|+.|++||.+|+++|+||++||++... +...|.|+ +++ +++|+.+++|+|
T Consensus 12 ~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~-e~~~i~l~~~v~--~~~f~~lL~~iY 88 (124)
T 2ihc_A 12 HSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQAD-GELNITLPEEVT--VKGFEPLIQFAY 88 (124)
T ss_dssp HHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC----CEEEECCTTSC--HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCC-CCceEeecCCcC--HHHHHHHHHHhc
Confidence 34567888999999999999999999999999999999999999999997521 12467784 776 699999999999
Q ss_pred CCCccCChhhHhHHHhhhcccccccccccchHHHHHHHHHH
Q 007123 95 GINFEITSANVAQLCCVSDYLEMTEDFSKDNLGSRAEEYID 135 (617)
Q Consensus 95 ~~~i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~ 135 (617)
||++.++.+||..|+.||++|||++ |.+.|++||.
T Consensus 89 tg~~~i~~~~v~~ll~~A~~~~~~~------L~~~C~~~l~ 123 (124)
T 2ihc_A 89 TAKLILSKENVDEVCKCVEFLSVHN------IEESCFQFLK 123 (124)
T ss_dssp HSEEEEETTTHHHHHHHHHHHTBSS------CCGGGGGTC-
T ss_pred CCCcccCHHHHHHHHHHHHHHCCHH------HHHHHHHHHh
Confidence 9999999999999999999999999 9999999985
No 19
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.78 E-value=1.7e-19 Score=186.46 Aligned_cols=138 Identities=18% Similarity=0.213 Sum_probs=119.4
Q ss_pred HHHHHhHHHhhcCCCeeEEEEECCeEeeecccccccccHHHHHhhccC-CCCCcccccccCCCCCHHHHHHHHHHHhCCC
Q 007123 19 SSRQRCNEWIFRDVPSDITIDVNGGTFALHKFPLVSRSGRIRKLVAEH-RDSDISRIELLNLPGGAETFELAAKFCYGIN 97 (617)
Q Consensus 19 ~~~~~~~~w~~~~~~~DV~v~V~g~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~v~L~~~pgGae~felv~~FcY~~~ 97 (617)
...+.++.++.++.+|||+|.|+|+.|++||.+|+++|+||++||... .|+...+|.|++++ +++|+.+++|+||+.
T Consensus 160 ~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~L~~iYt~~ 237 (312)
T 3hqi_A 160 RLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGK 237 (312)
T ss_dssp CHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSC--HHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCC--HHHHHHHHHhhcCCC
Confidence 456778888889999999999999999999999999999999999875 67777899999987 699999999999999
Q ss_pred ccCChhhHhHHHhhhcccccccccccchHHHHHHHHHHHHhhhhhhhHHHHHhhhhhHHHHHHhhc---hhHHHHHHHH
Q 007123 98 FEITSANVAQLCCVSDYLEMTEDFSKDNLGSRAEEYIDCIVCKNLEMCVEVLQQCESLLPLADELK---IVSRCIDAVA 173 (617)
Q Consensus 98 i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v~~sw~~si~~L~sC~~L~~~Ae~~~---Iv~RcidsLA 173 (617)
+.++.+|+..|+.||++++|+. |...|+.||.+.+. ..||..++.+|+.++ +...|++-|+
T Consensus 238 ~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~~~---------~~n~~~~l~~A~~~~~~~L~~~~~~~i~ 301 (312)
T 3hqi_A 238 APNLDKMADDLLAAADKYALER------LKVMCEDALCSNLS---------VENAAEILILADLHSADQLKTQAVDFIN 301 (312)
T ss_dssp CTTHHHHHHHHHHHHHHTTCHH------HHHHHHHHHHTTCC---------TTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHhCHHH------HHHHHHHHHHccCC---------HHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999999999999999 99999999998873 468999999999986 3444444443
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.77 E-value=5.7e-19 Score=158.33 Aligned_cols=98 Identities=21% Similarity=0.178 Sum_probs=90.7
Q ss_pred hhhHHHHHhHHHhhcCCCeeEEEEECCeEeeecccccccccHHHHHhhccCCCCCcccccccCCCCCHHHHHHHHHHHhC
Q 007123 16 LAKSSRQRCNEWIFRDVPSDITIDVNGGTFALHKFPLVSRSGRIRKLVAEHRDSDISRIELLNLPGGAETFELAAKFCYG 95 (617)
Q Consensus 16 ~~~~~~~~~~~w~~~~~~~DV~v~V~g~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~v~L~~~pgGae~felv~~FcY~ 95 (617)
-.+..++.+++.+..+.+|||+|.|+|+.|++||.+|+++|+||++||... ...|.|++++ +++|+.+++|+||
T Consensus 14 ~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~----~~~i~l~~~~--~~~f~~~l~~~Yt 87 (116)
T 3fkc_A 14 YSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA----GQVVELSFIR--AEIFAEILNYIYS 87 (116)
T ss_dssp HHHHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSC--HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCC--HHHHHHHHHhhcC
Confidence 456778889999999999999999999999999999999999999999864 4578899987 6999999999999
Q ss_pred CCc-cCChhhHhHHHhhhccccccc
Q 007123 96 INF-EITSANVAQLCCVSDYLEMTE 119 (617)
Q Consensus 96 ~~i-~it~~NV~~L~cAA~~LqM~e 119 (617)
|++ .++.+||..++.||++|||+.
T Consensus 88 g~~~~~~~~~~~~ll~~A~~l~i~~ 112 (116)
T 3fkc_A 88 SKIVRVRSDLLDELIKSGQLLGVKF 112 (116)
T ss_dssp SCCCSCCHHHHHHHHHHHHHHTCHH
T ss_pred CCcCCCCHHHHHHHHHHHHHhCccc
Confidence 999 799999999999999999987
No 21
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.39 E-value=2.6e-13 Score=128.53 Aligned_cols=95 Identities=15% Similarity=0.294 Sum_probs=82.8
Q ss_pred EEEEE-CCeEeeecccccccccHHHHHhhcc-C-C-CCCcccccccCCCCCHHHHHHHHHHHhCCC--------------
Q 007123 36 ITIDV-NGGTFALHKFPLVSRSGRIRKLVAE-H-R-DSDISRIELLNLPGGAETFELAAKFCYGIN-------------- 97 (617)
Q Consensus 36 V~v~V-~g~~F~lHK~vLas~S~yfr~lf~~-~-~-e~~~~~v~L~~~pgGae~felv~~FcY~~~-------------- 97 (617)
|+|.. +|+.|.+|+.+ |++|+||+.||.. + . ++....|.|++++ +.+++.+++|||..+
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~--~~iL~kViey~~~h~~~~~~~~~~~~~~~ 79 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEK 79 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSC--HHHHHHHHHHHHHTTTCCC----------
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCcc--HHHHHHHHHHHHHcCcCCCCccccccccc
Confidence 67765 79999999998 8999999999987 3 3 5555689999998 499999999999887
Q ss_pred ------------ccCChhhHhHHHhhhcccccccccccchHHHHHHHHHHHHhh
Q 007123 98 ------------FEITSANVAQLCCVSDYLEMTEDFSKDNLGSRAEEYIDCIVC 139 (617)
Q Consensus 98 ------------i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v~ 139 (617)
+.|+..|+..|+.||.||+|.. |++.|+.|+...+.
T Consensus 80 ~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~------Lld~~c~~va~~i~ 127 (159)
T 2ast_A 80 RTDDIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMIK 127 (159)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHHS
T ss_pred chhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHc
Confidence 8999999999999999999999 99999999999884
No 22
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.15 E-value=3.4e-11 Score=105.01 Aligned_cols=79 Identities=11% Similarity=0.315 Sum_probs=65.5
Q ss_pred EEEEE-CCeEeeecccccccccHHHHHhhccC---CCCCcccccccCCCCCHHHHHHHHHHHh-----C---CCcc---C
Q 007123 36 ITIDV-NGGTFALHKFPLVSRSGRIRKLVAEH---RDSDISRIELLNLPGGAETFELAAKFCY-----G---INFE---I 100 (617)
Q Consensus 36 V~v~V-~g~~F~lHK~vLas~S~yfr~lf~~~---~e~~~~~v~L~~~pgGae~felv~~FcY-----~---~~i~---i 100 (617)
|+|+- +|+.|.+||.+ |++|+||+.||+.. .|+....|.|++++ +.+++.+++||| + +.+. |
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~--~~iL~kViey~~~h~~~~~~~~~i~~~~i 80 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI 80 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSC--HHHHHHHHHHHHHHHHHTTCCSCCCCCCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCC--HHHHHHHHHHHHHhcccCCCcCCCCcCcC
Confidence 55554 78999999998 99999999999862 45556789999998 599999999999 5 6777 9
Q ss_pred ChhhHhHHHhhhccccc
Q 007123 101 TSANVAQLCCVSDYLEM 117 (617)
Q Consensus 101 t~~NV~~L~cAA~~LqM 117 (617)
+.+|+..|+.||+||+.
T Consensus 81 ~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 81 APEIALELLMAANFLDC 97 (97)
T ss_dssp CGGGHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHhhhCC
Confidence 99999999999999973
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.09 E-value=1.2e-10 Score=108.34 Aligned_cols=92 Identities=13% Similarity=0.287 Sum_probs=82.1
Q ss_pred EEEEE-CCeEeeecccccccccHHHHHhhccCCCCCcccccccCCCCCHHHHHHHHHHHhCCC-----------------
Q 007123 36 ITIDV-NGGTFALHKFPLVSRSGRIRKLVAEHRDSDISRIELLNLPGGAETFELAAKFCYGIN----------------- 97 (617)
Q Consensus 36 V~v~V-~g~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~v~L~~~pgGae~felv~~FcY~~~----------------- 97 (617)
|+|.. +|+.|.+|+.+ |..|+||+.||.... ...|.|+++++ .+++.+++|||..+
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~Ipl~~V~~--~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 77 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG---MDPVPLPNVNA--AILKKVIQWCTHHKDDPPPPEDDENKEKRTD 77 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC---CSSEECTTCCH--HHHHHHHHHHHHHTTCC--------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC---CCceecCCcCH--HHHHHHHHHHHHhccCCCccccccccccchh
Confidence 67776 78999999997 899999999998642 34799999985 99999999999754
Q ss_pred ---------ccCChhhHhHHHhhhcccccccccccchHHHHHHHHHHHHhh
Q 007123 98 ---------FEITSANVAQLCCVSDYLEMTEDFSKDNLGSRAEEYIDCIVC 139 (617)
Q Consensus 98 ---------i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v~ 139 (617)
+.++.+++..|+.||.||+|.. |++.|+.|+...+-
T Consensus 78 ~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~~ik 122 (141)
T 1fs1_B 78 DIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMIK 122 (141)
T ss_dssp ---HHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHhCCHHHHHHHHHHHHHHhhhH------HHHHHHHHHHHHHc
Confidence 7899999999999999999999 99999999999873
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.87 E-value=1.7e-10 Score=109.52 Aligned_cols=92 Identities=16% Similarity=0.287 Sum_probs=51.6
Q ss_pred EEEEE-CCeEeeecccccccccHHHHHhhccCCCCCcccccccCCCCCHHHHHHHHHHHhCCC-----------------
Q 007123 36 ITIDV-NGGTFALHKFPLVSRSGRIRKLVAEHRDSDISRIELLNLPGGAETFELAAKFCYGIN----------------- 97 (617)
Q Consensus 36 V~v~V-~g~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~v~L~~~pgGae~felv~~FcY~~~----------------- 97 (617)
|+|.. +|+.|.+|+.+ |..|+||+.||.... ....|.|++|++ .+++.|++|||..+
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~--~~~~Ipl~~V~~--~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 80 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC--VDNGVPLPNVTS--KILAKVIEYCKRHVEAAASKAEAVEGAATSD 80 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC--------------CCTTSCH--HHHHHHHHC----------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC--CCCceeCCcCcH--HHHHHHHHHHHHcccCCCccccccccccccc
Confidence 66664 79999999998 899999999998642 234789999985 99999999999865
Q ss_pred ----------ccCChhhHhHHHhhhcccccccccccchHHHHHHHHHHHHh
Q 007123 98 ----------FEITSANVAQLCCVSDYLEMTEDFSKDNLGSRAEEYIDCIV 138 (617)
Q Consensus 98 ----------i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v 138 (617)
+.++..++..|+.||.||+|.. |++.|+.|+...+
T Consensus 81 ~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~~i 125 (160)
T 2p1m_A 81 DDLKAWDADFMKIDQATLFELILAANYLNIKN------LLDLTCQTVADMI 125 (160)
T ss_dssp --------------------CHHHHHHTTCHH------HHHHHHHHHHHTT
T ss_pred chhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHH
Confidence 5789999999999999999999 9999999999987
No 25
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.33 E-value=6.8e-07 Score=85.50 Aligned_cols=95 Identities=12% Similarity=0.225 Sum_probs=77.7
Q ss_pred eEEEEE-CCeEeeecccccccccHHHHHhhccCCC-----CCcccccccCCCCCHHHHHHHHHHHhCCC-----------
Q 007123 35 DITIDV-NGGTFALHKFPLVSRSGRIRKLVAEHRD-----SDISRIELLNLPGGAETFELAAKFCYGIN----------- 97 (617)
Q Consensus 35 DV~v~V-~g~~F~lHK~vLas~S~yfr~lf~~~~e-----~~~~~v~L~~~pgGae~felv~~FcY~~~----------- 97 (617)
-|+|+- +|+.|.+++.+ |..|++++.|+..... .....|.|+++++ .+++.|++|||--+
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s--~iL~kVieyc~~h~~~~~~~~~~~~ 84 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRS--SVLQKVIEWAEHHRDSNFPDEDDDD 84 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCH--HHHHHHHHHHHHTTTCCCCC-----
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCH--HHHHHHHHHHHHcccCCCccccccc
Confidence 466665 68999999986 7889999999986421 2235789999985 99999999998532
Q ss_pred --------------ccCChhhHhHHHhhhcccccccccccchHHHHHHHHHHHHh
Q 007123 98 --------------FEITSANVAQLCCVSDYLEMTEDFSKDNLGSRAEEYIDCIV 138 (617)
Q Consensus 98 --------------i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v 138 (617)
+.+....+..|+.||.||+|.. |++.|+.++...+
T Consensus 85 ~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~------Lldl~c~~vA~~i 133 (169)
T 3v7d_A 85 SRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKP------LLDAGCKVVAEMI 133 (169)
T ss_dssp ---CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHH------HHHHHHHHHHHHH
T ss_pred ccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHHH
Confidence 4678899999999999999999 9999999998876
No 26
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.33 E-value=4.5e-07 Score=79.37 Aligned_cols=79 Identities=19% Similarity=0.279 Sum_probs=66.3
Q ss_pred EEEEE-CCeEeeecccccccccHHHHHhhccCCCCCcccccccCCCCCHHHHHHHHHHHhCCC--------------ccC
Q 007123 36 ITIDV-NGGTFALHKFPLVSRSGRIRKLVAEHRDSDISRIELLNLPGGAETFELAAKFCYGIN--------------FEI 100 (617)
Q Consensus 36 V~v~V-~g~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~v~L~~~pgGae~felv~~FcY~~~--------------i~i 100 (617)
|+|.- +|+.|.+|+.+ |..|++|+.|+..+-+.....|.|+++++ .+++.+++|||.-+ ..+
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~e~~~~~Iplp~V~~--~iL~kVieyc~~h~~~~~~~~~~~~i~~w~v 82 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPFRESKGRIELKQFDS--HILEKAVEYLNYNLKYSGVSEDDDEIPEFEI 82 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSSTTTCTTEEEETTSCH--HHHHHHHHHHHHHHHHHHHCSSCSSCCCCCC
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhcccccCCCceecCCcCH--HHHHHHHHHHHHhcccCCCccccccCCCccC
Confidence 67766 88999999996 89999999999863333445799999985 99999999999532 468
Q ss_pred ChhhHhHHHhhhccccc
Q 007123 101 TSANVAQLCCVSDYLEM 117 (617)
Q Consensus 101 t~~NV~~L~cAA~~LqM 117 (617)
....+..|+.||.||++
T Consensus 83 d~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 83 PTEMSLELLLAADYLSI 99 (99)
T ss_dssp CHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 88999999999999985
No 27
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.29 E-value=4.4e-07 Score=78.94 Aligned_cols=79 Identities=13% Similarity=0.306 Sum_probs=64.0
Q ss_pred EEEEE-CCeEeeecccccccccHHHHHhhccC---CCCCcccccccCCCCCHHHHHHHHHHHhCCC-----------ccC
Q 007123 36 ITIDV-NGGTFALHKFPLVSRSGRIRKLVAEH---RDSDISRIELLNLPGGAETFELAAKFCYGIN-----------FEI 100 (617)
Q Consensus 36 V~v~V-~g~~F~lHK~vLas~S~yfr~lf~~~---~e~~~~~v~L~~~pgGae~felv~~FcY~~~-----------i~i 100 (617)
|++.- +|+.|.+|+.+ |..|++|+.|+... .|.....|.|+++++ .+++.+++|||.-. ..+
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~--~iL~kVieyc~~h~~~~~~~~~i~~w~v 79 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPS--HVLSKVCMYFTYKVRYTNSSTEIPEFPI 79 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCH--HHHHHHHHHHHHHHHHHSCCSCCCCCCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCH--HHHHHHHHHHHHccccCCCcccCCCccc
Confidence 56665 88999999996 89999999999863 344456799999985 99999999998532 478
Q ss_pred ChhhHhHHHhhhccccc
Q 007123 101 TSANVAQLCCVSDYLEM 117 (617)
Q Consensus 101 t~~NV~~L~cAA~~LqM 117 (617)
..+.+..|+.||.||++
T Consensus 80 d~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 80 APEIALELLMAANFLDC 96 (96)
T ss_dssp CTTTHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 89999999999999985
No 28
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.70 E-value=2e-05 Score=70.53 Aligned_cols=80 Identities=13% Similarity=0.287 Sum_probs=63.5
Q ss_pred eEEEE-ECCeEeeecccccccccHHHHHhhccC---CCCCcccccccCCCCCHHHHHHHHHHHhCCC-----------cc
Q 007123 35 DITID-VNGGTFALHKFPLVSRSGRIRKLVAEH---RDSDISRIELLNLPGGAETFELAAKFCYGIN-----------FE 99 (617)
Q Consensus 35 DV~v~-V~g~~F~lHK~vLas~S~yfr~lf~~~---~e~~~~~v~L~~~pgGae~felv~~FcY~~~-----------i~ 99 (617)
-|+|+ .+|+.|.+++. .|..|+.++.|+... .+.....|.|+++++ .+++.|++|||--. ..
T Consensus 18 ~v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s--~iL~kVieyc~~h~~~~~~~~~i~~w~ 94 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAENETNEVNFREIPS--HVLSKVCMYFTYKVRYTNSSTEIPEFP 94 (112)
T ss_dssp EEEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC--------CEEECSSCCH--HHHHHHHHHHHHHHHHSSCSSCCCCCC
T ss_pred EEEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCcccccCCceeCCCCCH--HHHHHHHHHHHHhhhccCCcCCCCCcc
Confidence 36666 47899999998 578999999999863 233345799999985 99999999998421 47
Q ss_pred CChhhHhHHHhhhccccc
Q 007123 100 ITSANVAQLCCVSDYLEM 117 (617)
Q Consensus 100 it~~NV~~L~cAA~~LqM 117 (617)
+....+..|+.||.||++
T Consensus 95 vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 95 IAPEIALELLMAANFLDC 112 (112)
T ss_dssp CCHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCc
Confidence 888999999999999985
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.42 E-value=0.00033 Score=61.81 Aligned_cols=93 Identities=12% Similarity=0.143 Sum_probs=71.8
Q ss_pred eEEEEECCeEeeeccccccccc-HHHHHhhccCCC----C-CcccccccCCCCCHHHHHHHHHHHhCCCccCCh-hhHhH
Q 007123 35 DITIDVNGGTFALHKFPLVSRS-GRIRKLVAEHRD----S-DISRIELLNLPGGAETFELAAKFCYGINFEITS-ANVAQ 107 (617)
Q Consensus 35 DV~v~V~g~~F~lHK~vLas~S-~yfr~lf~~~~e----~-~~~~v~L~~~pgGae~felv~~FcY~~~i~it~-~NV~~ 107 (617)
=|+|.|||+.|...+..|.... .+|.+||....+ . ...++-+ | -.|+.|+.|++|..+|++.+.. -.+..
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-D--Rdp~~F~~IL~~lr~g~l~~p~~~~~~~ 83 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-D--RDPTYFGPVLNYLRHGKLVINKDLAEEG 83 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-C--SCHHHHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-c--CChHHHHHHHHHhCCCeeCCCCCCCHHH
Confidence 4788999999999999999875 578999875311 1 2234433 3 3479999999999999988744 23567
Q ss_pred HHhhhcccccccccccchHHHHHHHHHHH
Q 007123 108 LCCVSDYLEMTEDFSKDNLGSRAEEYIDC 136 (617)
Q Consensus 108 L~cAA~~LqM~e~~~~~NL~~~ce~FL~~ 136 (617)
++..|+|.++++ |++.|++-+.+
T Consensus 84 l~~Ea~fy~l~~------L~~~l~~~i~~ 106 (107)
T 3drz_A 84 VLEEAEFYNITS------LIKLVKDKIRE 106 (107)
T ss_dssp HHHHHHHHTCHH------HHHHHHHHHHH
T ss_pred HHHHHHHCCCHH------HHHHHHHHHhc
Confidence 999999999999 99999876543
No 30
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.08 E-value=9.1e-05 Score=64.93 Aligned_cols=89 Identities=10% Similarity=0.076 Sum_probs=63.1
Q ss_pred HhhhhhHHHHHHhhchhHHHHHHHHHHHhhhhccccccccccccccccccCCCCccCCcccccccccCChHHHHHHHHhH
Q 007123 149 LQQCESLLPLADELKIVSRCIDAVASKACAEQIASSFSRLEYSSSGRLHMNKHTKCEGDWWIEDLSVLRFDLYQRVMTAM 228 (617)
Q Consensus 149 L~sC~~L~~~Ae~~~Iv~RcidsLA~kAc~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dWW~EDl~~L~~d~f~rVI~am 228 (617)
..||.+++.+|+.|++ ..|..+| .. +.. .++......+||..|+.+.+..+|+..
T Consensus 10 ~~NCl~i~~~A~~~~~-----~~L~~~a-~~-------fi~------------~nF~~v~~~~eFl~L~~~~L~~lL~sd 64 (105)
T 2eqx_A 10 VGNCLQVMWLADRHSD-----PELYTAA-KH-------CAK------------THLAQLQNTEEFLHLPHRLLTDIISDG 64 (105)
T ss_dssp TTTHHHHHHHHHHTTC-----HHHHHHH-HH-------HHH------------HTCHHHHTSHHHHHSCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCC-----HHHHHHH-HH-------HHH------------HHHHHHHhcccHhhCCHHHHHHHHcCC
Confidence 4699999999999995 5565544 11 111 011122346899999999988888873
Q ss_pred hhCCCChhhHHHHHHHHHHhhhcccccCCCCCCcccccCCCCCcchhHHHHHHHH
Q 007123 229 KCRGVRPESIGASLMNYAQKELTKKSSLWNPTTQAKVDLVSVPSGHERQVVETII 283 (617)
Q Consensus 229 ~~~g~~~e~I~~al~~Ya~k~l~~~~~~~~~~~~~~~~~~~~~~~~~r~LLEtIv 283 (617)
..+++.|++|++.|++++...+. .+...|++.|+
T Consensus 65 ---v~~E~~vf~av~~Wv~~d~~~R~------------------~~~~~Ll~~VR 98 (105)
T 2eqx_A 65 ---VPCSQNPTEAIEAWINFNKEERE------------------AFAESLRTSLK 98 (105)
T ss_dssp ---EETTSCHHHHHHHHHHTTHHHHH------------------HHHHHHHHHCC
T ss_pred ---CCCHHHHHHHHHHHHHcCHHHHH------------------HHHHHHHHHHH
Confidence 44788899999999998876442 45677888776
No 31
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=95.83 E-value=0.016 Score=56.88 Aligned_cols=94 Identities=12% Similarity=0.108 Sum_probs=71.9
Q ss_pred eEEEEECCeEeeeccccccccc-HHHHHhhccCCC-----CCcccccccCCCCCHHHHHHHHHHHhCCCccCCh-hhHhH
Q 007123 35 DITIDVNGGTFALHKFPLVSRS-GRIRKLVAEHRD-----SDISRIELLNLPGGAETFELAAKFCYGINFEITS-ANVAQ 107 (617)
Q Consensus 35 DV~v~V~g~~F~lHK~vLas~S-~yfr~lf~~~~e-----~~~~~v~L~~~pgGae~felv~~FcY~~~i~it~-~NV~~ 107 (617)
=|+|.|||..|...+..|.... .+|.+||....+ ....++-|. - .|..|+.|++|.-+|++.+.. -.+..
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFID-R--DP~~F~~ILnyLRtG~L~lP~~~~~~~ 89 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLID-R--DPTYFGPVLNYLRHGKLVINKDLAEEG 89 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEEC-S--CSTTHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEec-C--ChHHHHHHHHHhcCCccCCCCCCCHHH
Confidence 4678999999999999998774 488899875311 122344443 2 348999999999999998743 23467
Q ss_pred HHhhhcccccccccccchHHHHHHHHHHHH
Q 007123 108 LCCVSDYLEMTEDFSKDNLGSRAEEYIDCI 137 (617)
Q Consensus 108 L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~ 137 (617)
++.-|+|+++++ |++.|++-+.+.
T Consensus 90 l~eEA~FygL~~------Lv~~l~~~i~er 113 (202)
T 3drx_A 90 VLEEAEFYNITS------LIKLVKDKIRER 113 (202)
T ss_dssp HHHHHHHTTCHH------HHHHHHHHHHHH
T ss_pred HHHHHHHCCcHH------HHHHHHHHHHHH
Confidence 999999999999 999998888764
No 32
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=92.60 E-value=0.051 Score=48.52 Aligned_cols=81 Identities=11% Similarity=0.091 Sum_probs=60.0
Q ss_pred EEEEECCeEeeecccccccccH-HHHHhhccCC--CCCcccccccCCCCCHHHHHHHHHHHhCCCccCCh-hhHhHHHhh
Q 007123 36 ITIDVNGGTFALHKFPLVSRSG-RIRKLVAEHR--DSDISRIELLNLPGGAETFELAAKFCYGINFEITS-ANVAQLCCV 111 (617)
Q Consensus 36 V~v~V~g~~F~lHK~vLas~S~-yfr~lf~~~~--e~~~~~v~L~~~pgGae~felv~~FcY~~~i~it~-~NV~~L~cA 111 (617)
|+|.|||+.|...+..|....+ .|.+|+.... .....++-|. -.|..|..|++|.-+|++.+.. -.+..++.-
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~FiD---Rdp~~F~~ILnylR~G~l~~p~~~~~~~~~~E 83 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFFD---RHPGVFAQIINYYRSGKLHYPTDVCGPLFEEE 83 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEEC---SCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHH
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEEe---cChHHHHHHHHHhcCCCCCCCCcccHHHHHHH
Confidence 7889999999999988886633 4556665421 1223345443 2348999999999999988754 356789999
Q ss_pred hccccccc
Q 007123 112 SDYLEMTE 119 (617)
Q Consensus 112 A~~LqM~e 119 (617)
|+|.++++
T Consensus 84 a~fy~i~~ 91 (115)
T 3kvt_A 84 LEFWGLDS 91 (115)
T ss_dssp HHHHTCCG
T ss_pred HHHhCCCh
Confidence 99999998
No 33
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=91.82 E-value=0.14 Score=46.37 Aligned_cols=80 Identities=13% Similarity=0.135 Sum_probs=56.5
Q ss_pred eeEEEEECCeEeeecccccccccHHHHHhhccC-----CCCCcccccccCCCCCHHHHHHHHHHHhCCCccCChh-hHhH
Q 007123 34 SDITIDVNGGTFALHKFPLVSRSGRIRKLVAEH-----RDSDISRIELLNLPGGAETFELAAKFCYGINFEITSA-NVAQ 107 (617)
Q Consensus 34 ~DV~v~V~g~~F~lHK~vLas~S~yfr~lf~~~-----~e~~~~~v~L~~~pgGae~felv~~FcY~~~i~it~~-NV~~ 107 (617)
.=|+|.|||..|..-+..|...-+ .|+..+ ......++-| .-.++.|+.|++|.-+|++.+..+ .+..
T Consensus 13 ~~V~LNVGG~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~g~~Fi---DRdp~~F~~ILnflR~G~l~~p~~~~~~~ 86 (124)
T 1s1g_A 13 ELIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECISA 86 (124)
T ss_dssp CEEEEEETTEEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSSCSEEE---CSCHHHHHHHHHHHHHSCBCCCTTSCHHH
T ss_pred CEEEEEeCCEEEEEeHHHHhcCCC---ceecccCCcccccCCCCcEEE---cCChHHHHHHHHHHhcCCCCCCCCcCHHH
Confidence 347889999999998887765432 123221 0112233433 335799999999999999886442 4788
Q ss_pred HHhhhccccccc
Q 007123 108 LCCVSDYLEMTE 119 (617)
Q Consensus 108 L~cAA~~LqM~e 119 (617)
++.-|+|.++++
T Consensus 87 l~~Ea~fy~i~~ 98 (124)
T 1s1g_A 87 YDDELAFYGILP 98 (124)
T ss_dssp HHHHHHHTTCCG
T ss_pred HHHHHHHcCCCh
Confidence 999999999998
No 34
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=88.97 E-value=0.3 Score=42.48 Aligned_cols=81 Identities=12% Similarity=0.077 Sum_probs=55.9
Q ss_pred EEEEECCeEeeeccccccccc-HHHHHhhccC--CCCCcccccccCCCCCHHHHHHHHHHHhC-CCccCCh-hhHhHHHh
Q 007123 36 ITIDVNGGTFALHKFPLVSRS-GRIRKLVAEH--RDSDISRIELLNLPGGAETFELAAKFCYG-INFEITS-ANVAQLCC 110 (617)
Q Consensus 36 V~v~V~g~~F~lHK~vLas~S-~yfr~lf~~~--~e~~~~~v~L~~~pgGae~felv~~FcY~-~~i~it~-~NV~~L~c 110 (617)
|+|.|||+.|...+..|...- ..+-+|+... -+....++-+. -.|+.|+.|++|.-+ |++.+.. -.+..++.
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFiD---Rdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~ 79 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFFD---RNRPSFDAILYFYQSGGRLRRPVNVPLDVFSE 79 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEEC---SCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEEc---CChHHHHHHHHHHhcCCcccCCCCCCHHHHHH
Confidence 789999999999988885541 1233444321 11223345443 234899999999998 8887633 34678999
Q ss_pred hhccccccc
Q 007123 111 VSDYLEMTE 119 (617)
Q Consensus 111 AA~~LqM~e 119 (617)
-|+|.++++
T Consensus 80 Ea~fy~i~~ 88 (100)
T 1t1d_A 80 EIKFYELGE 88 (100)
T ss_dssp HHHHTTCCH
T ss_pred HHHHcCCCH
Confidence 999999988
No 35
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=87.54 E-value=0.23 Score=45.87 Aligned_cols=81 Identities=12% Similarity=0.164 Sum_probs=56.9
Q ss_pred CeeEEEEECCeEeeecccccccccHHHHHhhccC-C----CCCcccccccCCCCCHHHHHHHHHHHhCCCccCCh-hhHh
Q 007123 33 PSDITIDVNGGTFALHKFPLVSRSGRIRKLVAEH-R----DSDISRIELLNLPGGAETFELAAKFCYGINFEITS-ANVA 106 (617)
Q Consensus 33 ~~DV~v~V~g~~F~lHK~vLas~S~yfr~lf~~~-~----e~~~~~v~L~~~pgGae~felv~~FcY~~~i~it~-~NV~ 106 (617)
..=|+|.|||+.|...+..|...-+ .|+... + .....++-| .-.++.|+.|++|.-+|++.+.. -.+.
T Consensus 34 ~~~V~LNVGG~~F~T~~~TL~~~P~---S~L~~~~~~~~~~~~~g~yFi---DRdp~~F~~ILnflR~G~l~~p~~~~~~ 107 (140)
T 2nz0_B 34 DELIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECIS 107 (140)
T ss_dssp CCEEEEEETTEEEEEEHHHHHTCTT---STTTSGGGGGSEETTTTEEEE---CSCHHHHHHHHHHHHHSSBCCCTTSCHH
T ss_pred CCEEEEEECCEEEEeeHHHHhcCCC---eeecccCCcccccCCCCeEEE---eCCcHHHHHHHHHHhcCCcCCCCCcCHH
Confidence 3457889999999998887765422 133221 1 112234433 33579999999999999988644 3478
Q ss_pred HHHhhhccccccc
Q 007123 107 QLCCVSDYLEMTE 119 (617)
Q Consensus 107 ~L~cAA~~LqM~e 119 (617)
.++.-|+|+++++
T Consensus 108 ~l~eEa~fy~i~~ 120 (140)
T 2nz0_B 108 AYDDELAFYGILP 120 (140)
T ss_dssp HHHHHHHHHTCCG
T ss_pred HHHHHHHHcCCCh
Confidence 8999999999998
No 36
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=86.28 E-value=0.16 Score=44.56 Aligned_cols=78 Identities=12% Similarity=0.160 Sum_probs=55.0
Q ss_pred EEEEECCeEeeecccccccccHHHHHhhccC-C----CCCcccccccCCCCCHHHHHHHHHHHhCCCccCCh-hhHhHHH
Q 007123 36 ITIDVNGGTFALHKFPLVSRSGRIRKLVAEH-R----DSDISRIELLNLPGGAETFELAAKFCYGINFEITS-ANVAQLC 109 (617)
Q Consensus 36 V~v~V~g~~F~lHK~vLas~S~yfr~lf~~~-~----e~~~~~v~L~~~pgGae~felv~~FcY~~~i~it~-~NV~~L~ 109 (617)
|+|.|||+.|...+..|...-+ .|+... + .....++-+. -.|+.|+.|++|.-+|++.+.. -.+..++
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~FiD---Rdp~~F~~ILnflR~g~l~~p~~~~~~~l~ 75 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFFD---RDPDIFRHILNFYRTGKLHYPRHECISAYD 75 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEEC---SCTTTHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEEe---CCcHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 7899999999998887765432 123221 1 1122344433 2358999999999999987644 3478899
Q ss_pred hhhccccccc
Q 007123 110 CVSDYLEMTE 119 (617)
Q Consensus 110 cAA~~LqM~e 119 (617)
.-|+|.++++
T Consensus 76 ~Ea~fy~i~~ 85 (105)
T 1nn7_A 76 EELAFFGLIP 85 (105)
T ss_dssp HHHHHHTCCS
T ss_pred HHHHHcCCCH
Confidence 9999999998
No 37
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=73.93 E-value=2.8 Score=32.36 Aligned_cols=30 Identities=27% Similarity=0.417 Sum_probs=16.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 007123 535 ENRELKLELARLRMRLNDLEKEHVCMKRDM 564 (617)
Q Consensus 535 en~~Lk~el~~m~~rv~eLek~~~~mk~~~ 564 (617)
|.+.||.|++.+|.|+.+|.+++...+..+
T Consensus 20 d~eaLk~E~~eLk~k~~~L~~~~~el~~~l 49 (53)
T 2yy0_A 20 EIELLRLELAEMKEKYEAIVEENKKLKAKL 49 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555555555555555555555444
No 38
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=68.29 E-value=6.3 Score=30.07 Aligned_cols=36 Identities=33% Similarity=0.383 Sum_probs=32.5
Q ss_pred hhhhHHhHHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 007123 529 YASLRRENRELKLELARLRMRLNDLEKEHVCMKRDM 564 (617)
Q Consensus 529 ~~~~~ren~~Lk~el~~m~~rv~eLek~~~~mk~~~ 564 (617)
+..++.||-.||.||+.=...++.||.|-+.||.-+
T Consensus 12 Ve~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevl 47 (54)
T 1deb_A 12 VEALKMENSNLRQELEDNSNHLTKLETEASNMKEVL 47 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHH
Confidence 346889999999999999999999999999998765
No 39
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=59.06 E-value=2 Score=28.39 Aligned_cols=17 Identities=41% Similarity=0.540 Sum_probs=14.3
Q ss_pred hhHhHHHhhhccccccc
Q 007123 103 ANVAQLCCVSDYLEMTE 119 (617)
Q Consensus 103 ~NV~~L~cAA~~LqM~e 119 (617)
.||+.|+.||+||+=-|
T Consensus 3 ~nvq~LLeAAeyLErrE 19 (26)
T 1pd7_B 3 MNIQMLLEAADYLERRE 19 (26)
T ss_dssp CSTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 59999999999998443
No 40
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=54.73 E-value=14 Score=28.48 Aligned_cols=31 Identities=19% Similarity=0.149 Sum_probs=27.4
Q ss_pred chhhhHHhHHHHHHHHHHHHHHHHHHHHhhh
Q 007123 528 NYASLRRENRELKLELARLRMRLNDLEKEHV 558 (617)
Q Consensus 528 ~~~~~~ren~~Lk~el~~m~~rv~eLek~~~ 558 (617)
++..+++||.+||.+++.++.++.||.+...
T Consensus 20 d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~ 50 (53)
T 2yy0_A 20 EIELLRLELAEMKEKYEAIVEENKKLKAKLA 50 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4678999999999999999999999987643
No 41
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=46.67 E-value=13 Score=32.71 Aligned_cols=32 Identities=3% Similarity=-0.044 Sum_probs=22.8
Q ss_pred hcCCCCCChhHHHHHHHhcCCcccccchhHHHHHHHHHHhCCC
Q 007123 402 IAPDANLKLAKFMVIAETLPSHARTVHDGLYRAIDIYLKAHQN 444 (617)
Q Consensus 402 iA~D~~L~~~kF~~Lae~lP~~aR~~~DgLYrAIDiYLk~Hp~ 444 (617)
...|.+.++.++...+ .++++|||-||-+||.
T Consensus 91 ~~~~~~~~p~~~~~~~-----------~~~~k~ie~yll~~p~ 122 (122)
T 1vjh_A 91 KVHKDIDDPHSIIDES-----------VKYFKKLDEAILNFKE 122 (122)
T ss_dssp ESSTTSCCSHHHHHHH-----------HHHHHHHHHHHHHC--
T ss_pred ECCCCCCCHHHHHHHH-----------HHHHHHHHHHHhhCCC
Confidence 3456667777775544 6889999999999983
No 42
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=41.78 E-value=24 Score=26.73 Aligned_cols=33 Identities=15% Similarity=0.118 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhccccccc
Q 007123 535 ENRELKLELARLRMRLNDLEKEHVCMKRDMVKS 567 (617)
Q Consensus 535 en~~Lk~el~~m~~rv~eLek~~~~mk~~~~k~ 567 (617)
..-.||.--..+=+||.+||..|..+.++++++
T Consensus 5 ~l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL 37 (48)
T 3vmx_A 5 QILRLKQINIQLATKIQHLEFSCSEKEQEIERL 37 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 455677778888999999999999999998764
No 43
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=34.04 E-value=25 Score=38.63 Aligned_cols=82 Identities=10% Similarity=0.067 Sum_probs=54.2
Q ss_pred eEEEEECCeEeeecccccccccH-HHHHhhccC--CCCCcccccccCCCCCHHHHHHHHHHHhC-CCccCCh-hhHhHHH
Q 007123 35 DITIDVNGGTFALHKFPLVSRSG-RIRKLVAEH--RDSDISRIELLNLPGGAETFELAAKFCYG-INFEITS-ANVAQLC 109 (617)
Q Consensus 35 DV~v~V~g~~F~lHK~vLas~S~-yfr~lf~~~--~e~~~~~v~L~~~pgGae~felv~~FcY~-~~i~it~-~NV~~L~ 109 (617)
=|+|.|||..|...+.-|...-+ .+-+++... -+....++-+ +-.|+.|+.+++|..+ |++.+.. -.+..+.
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~---DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~ 129 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF---DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFS 129 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE---CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHH
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE---cCChHHHHHHHHHHhcCCccccCCcccHHHHH
Confidence 46779999999998877754311 111122211 1122234443 3457999999999998 9987643 2456688
Q ss_pred hhhccccccc
Q 007123 110 CVSDYLEMTE 119 (617)
Q Consensus 110 cAA~~LqM~e 119 (617)
.-|+|.++.+
T Consensus 130 ~E~~f~~i~~ 139 (514)
T 2r9r_B 130 EEIRFYELGE 139 (514)
T ss_dssp HHHHHTTCCH
T ss_pred HHHHhcCCCH
Confidence 9999999988
No 44
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.55 E-value=26 Score=29.80 Aligned_cols=36 Identities=17% Similarity=0.123 Sum_probs=32.5
Q ss_pred CccCChhhHhHHHhhhcccccccccccchHHHHHHHHHHHHh
Q 007123 97 NFEITSANVAQLCCVSDYLEMTEDFSKDNLGSRAEEYIDCIV 138 (617)
Q Consensus 97 ~i~it~~NV~~L~cAA~~LqM~e~~~~~NL~~~ce~FL~~~v 138 (617)
.=.|+++|...++..|+.++.++ |.++|..|+.+..
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~------L~~~a~~fi~~nF 40 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPE------LYTAAKHCAKTHL 40 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHHTC
T ss_pred hccCCHHHHHHHHHHHHHcCCHH------HHHHHHHHHHHHH
Confidence 44689999999999999999999 9999999998765
No 45
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=29.03 E-value=29 Score=29.70 Aligned_cols=25 Identities=24% Similarity=0.267 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhccccc
Q 007123 541 LELARLRMRLNDLEKEHVCMKRDMV 565 (617)
Q Consensus 541 ~el~~m~~rv~eLek~~~~mk~~~~ 565 (617)
.||+.||..|.|||..+..||+..+
T Consensus 50 ~Emq~Ir~tvyeLE~~h~kmKq~YE 74 (92)
T 3vp9_A 50 AEMQQIRNTVYERELTHRKMKDAYE 74 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5799999999999999999998653
No 46
>3b0b_C CENP-X, centromere protein X; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus} PDB: 3vh5_D 3vh6_D
Probab=29.01 E-value=53 Score=27.37 Aligned_cols=43 Identities=26% Similarity=0.339 Sum_probs=32.8
Q ss_pred CccccHHHHHHHHHHHHccCCCccccCccccccCCCCCCCChHHHHHHHHhHhHHHhhh
Q 007123 344 DTLFDVDTVHRILVNFAQQDDSEDEMDDASVFESDSPHSPSQTALLKVAKLVDNYLAEI 402 (617)
Q Consensus 344 ~~~yDvd~V~ril~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VakLvD~YLaEi 402 (617)
+..++.+++.||+..+...+.. .-+..++..||+++|-|..|.
T Consensus 6 ~~~~~~~lI~ril~~~f~~~kt----------------rI~~dAl~l~aeyl~iFV~EA 48 (81)
T 3b0b_C 6 EGGFRKETVERLLRLHFRDGRT----------------RVNGDALLLMAELLKVFVREA 48 (81)
T ss_dssp -CCCCHHHHHHHHHHHCCSTTC----------------EECHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhccCcc----------------cccHHHHHHHHHHHHHHHHHH
Confidence 4578999999999997654321 124568999999999999884
No 47
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=26.67 E-value=39 Score=27.77 Aligned_cols=34 Identities=26% Similarity=0.315 Sum_probs=29.6
Q ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 007123 531 SLRRENRELKLELARLRMRLNDLEKEHVCMKRDM 564 (617)
Q Consensus 531 ~~~ren~~Lk~el~~m~~rv~eLek~~~~mk~~~ 564 (617)
.+++|-+.||..+..+-.|+..||.|+.-.|+-.
T Consensus 12 AVREEVevLKe~I~EL~e~~~qLE~EN~~Lk~~a 45 (78)
T 1dip_A 12 AVREEVEILKEQIRELVEKNSQLERENTLLKTLA 45 (78)
T ss_dssp TCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4678889999999999999999999998777654
No 48
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=22.62 E-value=80 Score=23.00 Aligned_cols=38 Identities=29% Similarity=0.339 Sum_probs=28.0
Q ss_pred cchhhhHHhHHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 007123 527 DNYASLRRENRELKLELARLRMRLNDLEKEHVCMKRDM 564 (617)
Q Consensus 527 ~~~~~~~ren~~Lk~el~~m~~rv~eLek~~~~mk~~~ 564 (617)
++.+++..||+.||..--.-+.-+.=|||+..++++.+
T Consensus 10 nevaslenenetlkkknlhkkdliaylekeianlrkki 47 (49)
T 3he5_A 10 NEVASLENENETLKKKNLHKKDLIAYLEKEIANLRKKI 47 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcccHHHHHhcccHHHHHHHHHHHHHHHHHHh
Confidence 45678888999988765555666778888877776554
No 49
>4dra_E Centromere protein X; DNA binding complex, DNA damage repair, histone-fold, DNA BI protein; 2.41A {Homo sapiens} PDB: 4drb_J
Probab=21.45 E-value=65 Score=27.07 Aligned_cols=43 Identities=23% Similarity=0.304 Sum_probs=32.6
Q ss_pred CccccHHHHHHHHHHHHccCCCccccCccccccCCCCCCCChHHHHHHHHhHhHHHhhh
Q 007123 344 DTLFDVDTVHRILVNFAQQDDSEDEMDDASVFESDSPHSPSQTALLKVAKLVDNYLAEI 402 (617)
Q Consensus 344 ~~~yDvd~V~ril~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VakLvD~YLaEi 402 (617)
+..+..++|.||+..+...+.. .-+..++..|++++|-|..|.
T Consensus 10 ~~~i~~~li~ril~~~F~~~kT----------------kIs~dAl~l~aeyl~iFV~EA 52 (84)
T 4dra_E 10 GSGFRKELVSRLLHLHFKDDKT----------------KVSGDALQLMVELLKVFVVEA 52 (84)
T ss_dssp -CCCCHHHHHHHHHTTCSSTTC----------------EECHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhcCCCc----------------cccHHHHHHHHHHHHHHHHHH
Confidence 4678899999999977754331 124568999999999999884
No 50
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=21.03 E-value=95 Score=24.34 Aligned_cols=34 Identities=29% Similarity=0.339 Sum_probs=24.3
Q ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 007123 531 SLRRENRELKLELARLRMRLNDLEKEHVCMKRDM 564 (617)
Q Consensus 531 ~~~ren~~Lk~el~~m~~rv~eLek~~~~mk~~~ 564 (617)
.+..+.++|+.+-..++.++..|++|...+|+-|
T Consensus 27 ~le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk~ll 60 (63)
T 1ci6_A 27 ALTGECKELEKKNEALKERADSLAKEIQYLKDLI 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566677777777777788888888777666543
No 51
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=20.59 E-value=89 Score=26.07 Aligned_cols=26 Identities=35% Similarity=0.601 Sum_probs=22.0
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHHHhh
Q 007123 532 LRRENRELKLELARLRMRLNDLEKEH 557 (617)
Q Consensus 532 ~~ren~~Lk~el~~m~~rv~eLek~~ 557 (617)
--++.+.|-.||..+|.||+|||.|-
T Consensus 17 ~~~~~E~L~qEi~~Lr~kv~elEnEr 42 (81)
T 3qh9_A 17 KQRKAEELLQELRHLKIKVEELENER 42 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34667789999999999999999873
No 52
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=20.40 E-value=1.4e+02 Score=20.14 Aligned_cols=25 Identities=36% Similarity=0.551 Sum_probs=15.4
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHHH
Q 007123 530 ASLRRENRELKLELARLRMRLNDLE 554 (617)
Q Consensus 530 ~~~~ren~~Lk~el~~m~~rv~eLe 554 (617)
+.+.+|+..||.|+..++-.+..|.
T Consensus 5 aalkqeiaalkkeiaalkfeiaalk 29 (33)
T 4dzn_A 5 AALKQEIAALKKEIAALKFEIAALK 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666666666666655543
No 53
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=20.01 E-value=80 Score=28.70 Aligned_cols=34 Identities=21% Similarity=0.398 Sum_probs=23.2
Q ss_pred cCCCCCChhHHHHHHHhcCCcccccchhHHHHHHHHHHhCCC
Q 007123 403 APDANLKLAKFMVIAETLPSHARTVHDGLYRAIDIYLKAHQN 444 (617)
Q Consensus 403 A~D~~L~~~kF~~Lae~lP~~aR~~~DgLYrAIDiYLk~Hp~ 444 (617)
..+.++++.+.... ...-.++|+|||-||.+||.
T Consensus 123 ~~~~~~~~~~~~~~--------~~~~~~~~k~ie~yll~~~~ 156 (159)
T 1e09_A 123 KGNVEIKEEHVKAG--------KEKASNLFKLIETYLKGHPD 156 (159)
T ss_dssp CSSCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCTT
T ss_pred CCCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHhChh
Confidence 34555666554322 23356899999999999996
Done!