Query 007128
Match_columns 617
No_of_seqs 673 out of 3502
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 17:52:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007128.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007128hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg2_A Methyltransferase type 99.6 1.1E-16 3.8E-21 162.8 -2.3 131 180-324 11-143 (257)
2 1vl5_A Unknown conserved prote 99.5 6.4E-15 2.2E-19 148.5 1.2 112 196-317 27-141 (260)
3 1nkv_A Hypothetical protein YJ 99.4 1.6E-14 5.5E-19 144.7 2.5 143 192-345 22-182 (256)
4 3bus_A REBM, methyltransferase 99.4 1E-14 3.6E-19 147.7 0.5 121 189-319 44-169 (273)
5 3f4k_A Putative methyltransfer 99.4 2.1E-14 7.3E-19 143.9 1.3 129 215-346 47-192 (257)
6 3kkz_A Uncharacterized protein 99.4 2.7E-14 9.2E-19 144.6 1.9 128 215-345 47-191 (267)
7 3dlc_A Putative S-adenosyl-L-m 99.4 2.5E-14 8.6E-19 139.0 0.8 129 216-346 45-199 (219)
8 2o57_A Putative sarcosine dime 99.4 1.6E-14 5.5E-19 148.4 -0.8 150 187-346 59-230 (297)
9 3ujc_A Phosphoethanolamine N-m 99.4 1.8E-14 6.3E-19 144.6 -2.1 130 215-346 56-202 (266)
10 3hnr_A Probable methyltransfer 99.4 3.9E-14 1.3E-18 138.6 0.3 128 216-350 47-201 (220)
11 1xxl_A YCGJ protein; structura 99.4 7.5E-14 2.6E-18 139.2 2.1 101 215-317 22-125 (239)
12 3dh0_A SAM dependent methyltra 99.4 3.4E-14 1.2E-18 139.0 -1.8 130 216-347 39-178 (219)
13 4gek_A TRNA (CMO5U34)-methyltr 99.4 4.9E-14 1.7E-18 143.6 -1.0 100 215-317 71-179 (261)
14 3g5l_A Putative S-adenosylmeth 99.4 2.7E-14 9.1E-19 143.2 -3.0 99 215-317 45-146 (253)
15 2p7i_A Hypothetical protein; p 99.3 2E-14 7E-19 142.3 -4.1 125 216-347 44-196 (250)
16 1xtp_A LMAJ004091AAA; SGPP, st 99.3 4.4E-15 1.5E-19 148.5 -9.0 131 215-347 94-235 (254)
17 3vc1_A Geranyl diphosphate 2-C 99.3 4.6E-14 1.6E-18 146.6 -1.7 130 215-347 118-266 (312)
18 3mgg_A Methyltransferase; NYSG 99.3 7.5E-14 2.6E-18 141.7 -0.3 101 215-317 38-143 (276)
19 3ege_A Putative methyltransfer 99.3 6.8E-14 2.3E-18 141.5 -1.3 137 193-346 21-174 (261)
20 3dli_A Methyltransferase; PSI- 99.3 5.3E-14 1.8E-18 140.2 -2.7 122 215-345 42-179 (240)
21 2aot_A HMT, histamine N-methyl 99.3 6E-14 2.1E-18 144.4 -2.8 103 213-316 51-172 (292)
22 1y8c_A S-adenosylmethionine-de 99.3 1.4E-13 4.6E-18 136.4 -0.8 117 193-317 22-143 (246)
23 4htf_A S-adenosylmethionine-de 99.3 6.9E-14 2.4E-18 142.9 -3.1 102 215-318 69-175 (285)
24 3orh_A Guanidinoacetate N-meth 99.3 2.5E-13 8.4E-18 135.9 1.0 144 192-347 47-207 (236)
25 3l8d_A Methyltransferase; stru 99.3 5.1E-14 1.8E-18 139.7 -4.1 128 216-347 55-197 (242)
26 3gu3_A Methyltransferase; alph 99.3 1.6E-13 5.3E-18 140.7 -0.8 101 215-318 23-128 (284)
27 2ex4_A Adrenal gland protein A 99.3 6.6E-14 2.3E-18 139.5 -3.8 133 215-347 80-222 (241)
28 3dtn_A Putative methyltransfer 99.3 1.1E-13 3.8E-18 136.9 -2.4 100 214-317 44-149 (234)
29 2a14_A Indolethylamine N-methy 99.3 2.9E-13 1E-17 137.3 0.6 134 213-346 54-234 (263)
30 3h2b_A SAM-dependent methyltra 99.3 2.4E-13 8.3E-18 131.4 -0.2 128 216-348 43-180 (203)
31 3sm3_A SAM-dependent methyltra 99.3 1.2E-13 4.1E-18 135.9 -2.5 102 216-319 32-144 (235)
32 1pjz_A Thiopurine S-methyltran 99.3 7.9E-14 2.7E-18 136.2 -3.8 99 216-314 24-138 (203)
33 3hem_A Cyclopropane-fatty-acyl 99.3 3.5E-13 1.2E-17 139.1 0.8 99 215-317 73-184 (302)
34 1zx0_A Guanidinoacetate N-meth 99.3 4.3E-13 1.5E-17 133.5 1.3 144 191-345 46-205 (236)
35 1kpg_A CFA synthase;, cyclopro 99.3 2.8E-13 9.6E-18 138.4 -0.7 100 215-318 65-170 (287)
36 3jwg_A HEN1, methyltransferase 99.3 4.7E-13 1.6E-17 131.1 0.9 98 216-315 31-140 (219)
37 4fsd_A Arsenic methyltransfera 99.3 2.3E-13 7.8E-18 145.9 -2.1 132 215-347 84-248 (383)
38 3e23_A Uncharacterized protein 99.3 6.2E-14 2.1E-18 136.6 -6.4 125 216-347 45-179 (211)
39 3g2m_A PCZA361.24; SAM-depende 99.3 3.2E-13 1.1E-17 139.1 -1.5 101 217-319 85-193 (299)
40 3ccf_A Cyclopropane-fatty-acyl 99.3 4.5E-13 1.5E-17 136.6 -0.7 96 216-318 59-156 (279)
41 2yqz_A Hypothetical protein TT 99.3 5.1E-13 1.7E-17 133.9 -0.3 99 215-315 40-140 (263)
42 3lcc_A Putative methyl chlorid 99.2 1.5E-13 5.2E-18 136.2 -4.4 130 216-346 68-203 (235)
43 3pfg_A N-methyltransferase; N, 99.2 3.9E-13 1.3E-17 135.6 -1.6 95 216-316 52-151 (263)
44 3e8s_A Putative SAM dependent 99.2 6.1E-13 2.1E-17 129.9 -0.3 137 460-605 54-227 (227)
45 3ou2_A SAM-dependent methyltra 99.2 3.2E-13 1.1E-17 131.4 -2.6 96 216-317 48-147 (218)
46 1vlm_A SAM-dependent methyltra 99.2 3.8E-13 1.3E-17 132.2 -2.6 121 216-346 49-184 (219)
47 2fk8_A Methoxy mycolic acid sy 99.2 8.7E-13 3E-17 137.0 0.0 101 215-319 91-197 (318)
48 3mti_A RRNA methylase; SAM-dep 99.2 4.2E-13 1.4E-17 128.0 -2.4 103 215-318 23-137 (185)
49 3jwh_A HEN1; methyltransferase 99.2 7.2E-13 2.5E-17 129.7 -1.0 100 216-317 31-142 (217)
50 2gb4_A Thiopurine S-methyltran 99.2 7E-13 2.4E-17 134.3 -1.3 100 216-315 70-190 (252)
51 3ofk_A Nodulation protein S; N 99.2 6.7E-13 2.3E-17 129.6 -1.4 104 213-319 50-157 (216)
52 3ocj_A Putative exported prote 99.2 4.9E-13 1.7E-17 138.4 -2.6 99 216-316 120-227 (305)
53 4e2x_A TCAB9; kijanose, tetron 99.2 6.2E-14 2.1E-18 151.5 -9.9 126 215-346 108-249 (416)
54 2gs9_A Hypothetical protein TT 99.2 6.8E-13 2.3E-17 129.1 -1.7 99 214-319 36-135 (211)
55 2p8j_A S-adenosylmethionine-de 99.2 1E-12 3.5E-17 127.2 -0.8 102 216-318 25-130 (209)
56 3i9f_A Putative type 11 methyl 99.2 2.2E-13 7.4E-18 128.0 -5.6 122 215-347 18-145 (170)
57 3dmg_A Probable ribosomal RNA 99.2 4E-13 1.4E-17 144.1 -5.1 103 215-319 234-343 (381)
58 2kw5_A SLR1183 protein; struct 99.2 1.9E-12 6.4E-17 125.1 -0.1 126 217-347 32-168 (202)
59 3e8s_A Putative SAM dependent 99.2 8.6E-13 2.9E-17 128.8 -2.5 123 216-346 54-205 (227)
60 3g5t_A Trans-aconitate 3-methy 99.2 1.8E-12 6E-17 133.6 -0.4 99 215-315 37-148 (299)
61 2p35_A Trans-aconitate 2-methy 99.2 1.7E-12 5.9E-17 129.9 -0.6 97 215-318 34-134 (259)
62 3thr_A Glycine N-methyltransfe 99.2 6.8E-13 2.3E-17 135.8 -3.7 120 192-319 43-178 (293)
63 1ve3_A Hypothetical protein PH 99.2 1.5E-12 5.2E-17 127.5 -1.5 103 215-318 39-144 (227)
64 2zfu_A Nucleomethylin, cerebra 99.2 2E-12 6.8E-17 126.3 -0.9 107 216-346 69-175 (215)
65 2vdw_A Vaccinia virus capping 99.2 9.7E-13 3.3E-17 136.8 -3.5 104 215-319 49-172 (302)
66 1ri5_A MRNA capping enzyme; me 99.2 1E-12 3.6E-17 134.1 -3.8 103 216-319 66-177 (298)
67 2xvm_A Tellurite resistance pr 99.2 2.8E-12 9.6E-17 122.9 -0.7 99 216-316 34-136 (199)
68 3g07_A 7SK snRNA methylphospha 99.1 6.4E-13 2.2E-17 137.0 -5.6 105 215-319 47-223 (292)
69 3grz_A L11 mtase, ribosomal pr 99.1 3.5E-12 1.2E-16 123.7 -0.0 117 215-346 61-181 (205)
70 3bkw_A MLL3908 protein, S-aden 99.1 1.9E-12 6.5E-17 128.2 -3.1 99 216-318 45-146 (243)
71 3opn_A Putative hemolysin; str 99.1 1.7E-11 5.8E-16 122.6 3.7 123 215-346 38-180 (232)
72 3bkx_A SAM-dependent methyltra 99.1 7.8E-12 2.7E-16 126.5 1.2 100 216-317 45-160 (275)
73 2i62_A Nicotinamide N-methyltr 99.1 6.8E-12 2.3E-16 125.8 0.4 130 214-347 56-236 (265)
74 3dlc_A Putative S-adenosyl-L-m 99.1 4.8E-12 1.6E-16 122.8 -1.6 130 461-605 46-214 (219)
75 4e2x_A TCAB9; kijanose, tetron 99.1 4.6E-12 1.6E-16 136.8 -2.2 143 432-581 81-248 (416)
76 2g72_A Phenylethanolamine N-me 99.1 5E-12 1.7E-16 129.5 -1.8 132 215-346 72-252 (289)
77 1yzh_A TRNA (guanine-N(7)-)-me 99.1 8.3E-12 2.8E-16 122.2 -0.2 121 216-346 43-178 (214)
78 3h2b_A SAM-dependent methyltra 99.1 4.9E-12 1.7E-16 122.2 -2.0 134 460-604 43-194 (203)
79 3cc8_A Putative methyltransfer 99.1 3.2E-12 1.1E-16 125.0 -3.3 96 215-318 33-132 (230)
80 1y8c_A S-adenosylmethionine-de 99.1 7.3E-12 2.5E-16 123.9 -0.8 141 459-605 38-245 (246)
81 4hg2_A Methyltransferase type 99.1 2.2E-12 7.7E-17 131.0 -4.7 92 461-561 42-135 (257)
82 3i9f_A Putative type 11 methyl 99.1 3.8E-12 1.3E-16 119.4 -2.9 129 459-606 18-161 (170)
83 3mq2_A 16S rRNA methyltransfer 99.1 1.1E-11 3.7E-16 121.4 0.1 131 215-346 28-180 (218)
84 2avn_A Ubiquinone/menaquinone 99.1 6.7E-12 2.3E-16 126.6 -1.4 99 215-319 55-155 (260)
85 3cgg_A SAM-dependent methyltra 99.1 9.5E-12 3.3E-16 118.2 -0.3 120 216-346 48-171 (195)
86 3d2l_A SAM-dependent methyltra 99.1 6E-12 2E-16 124.6 -1.9 101 216-318 35-139 (243)
87 2fca_A TRNA (guanine-N(7)-)-me 99.1 7.6E-12 2.6E-16 123.0 -1.2 120 216-345 40-174 (213)
88 3hnr_A Probable methyltransfer 99.1 2E-12 6.7E-17 126.4 -5.5 130 460-605 47-212 (220)
89 3pfg_A N-methyltransferase; N, 99.1 7.8E-12 2.7E-16 126.0 -1.3 134 460-605 52-249 (263)
90 3m70_A Tellurite resistance pr 99.1 8.5E-12 2.9E-16 127.4 -1.2 99 216-316 122-223 (286)
91 1dus_A MJ0882; hypothetical pr 99.1 1.4E-11 4.7E-16 117.0 0.0 136 174-319 19-160 (194)
92 3p9n_A Possible methyltransfer 99.1 8.9E-12 3.1E-16 119.5 -1.3 135 177-319 14-156 (189)
93 1wzn_A SAM-dependent methyltra 99.1 1.2E-11 4.2E-16 123.5 -0.5 101 215-317 42-146 (252)
94 3eey_A Putative rRNA methylase 99.1 3E-12 1E-16 123.2 -4.8 102 216-318 24-141 (197)
95 3bgv_A MRNA CAP guanine-N7 met 99.1 9.8E-12 3.3E-16 129.0 -1.3 104 215-319 35-158 (313)
96 3e05_A Precorrin-6Y C5,15-meth 99.1 4.1E-11 1.4E-15 116.1 3.0 114 216-342 42-160 (204)
97 3m33_A Uncharacterized protein 99.1 1.1E-11 3.8E-16 122.5 -1.2 112 216-348 50-165 (226)
98 3hp7_A Hemolysin, putative; st 99.1 6.2E-11 2.1E-15 122.3 4.1 134 460-605 87-250 (291)
99 1xtp_A LMAJ004091AAA; SGPP, st 99.0 8.4E-12 2.9E-16 124.5 -2.5 122 458-585 93-236 (254)
100 4gek_A TRNA (CMO5U34)-methyltr 99.0 5.1E-12 1.7E-16 128.6 -4.3 98 461-563 73-180 (261)
101 3p2e_A 16S rRNA methylase; met 99.0 1.3E-11 4.4E-16 122.8 -1.4 129 215-346 25-181 (225)
102 2pxx_A Uncharacterized protein 99.0 9.1E-12 3.1E-16 120.6 -2.5 102 216-319 44-162 (215)
103 1kpg_A CFA synthase;, cyclopro 99.0 4.9E-12 1.7E-16 129.1 -4.6 101 458-563 64-170 (287)
104 3e23_A Uncharacterized protein 99.0 5.9E-12 2E-16 122.5 -3.9 115 460-581 45-177 (211)
105 3hm2_A Precorrin-6Y C5,15-meth 99.0 4.4E-11 1.5E-15 112.5 2.2 115 215-344 26-147 (178)
106 3dli_A Methyltransferase; PSI- 99.0 7E-12 2.4E-16 124.7 -3.5 115 460-581 43-179 (240)
107 2p7i_A Hypothetical protein; p 99.0 6.1E-12 2.1E-16 124.4 -4.1 94 461-562 45-142 (250)
108 3bxo_A N,N-dimethyltransferase 99.0 1.8E-11 6.3E-16 120.8 -0.7 98 215-318 41-143 (239)
109 3l8d_A Methyltransferase; stru 99.0 4.3E-12 1.5E-16 125.7 -5.3 115 460-581 55-195 (242)
110 3njr_A Precorrin-6Y methylase; 99.0 4.5E-11 1.5E-15 116.7 2.0 115 216-345 57-175 (204)
111 3dp7_A SAM-dependent methyltra 99.0 2E-11 6.8E-16 129.8 -1.0 129 216-347 181-339 (363)
112 2a14_A Indolethylamine N-methy 99.0 1.1E-11 3.6E-16 125.8 -3.0 143 460-605 57-260 (263)
113 2zfu_A Nucleomethylin, cerebra 99.0 1.4E-10 4.9E-15 113.0 5.0 149 429-605 26-191 (215)
114 3g5l_A Putative S-adenosylmeth 99.0 1.5E-11 5.2E-16 123.0 -2.1 126 454-586 40-215 (253)
115 1vlm_A SAM-dependent methyltra 99.0 1.9E-11 6.6E-16 119.9 -1.4 141 428-581 13-183 (219)
116 1xdz_A Methyltransferase GIDB; 99.0 1.9E-11 6.5E-16 122.0 -1.9 119 215-345 71-197 (240)
117 3hp7_A Hemolysin, putative; st 99.0 1.5E-10 5.1E-15 119.5 4.6 123 215-345 86-227 (291)
118 3lbf_A Protein-L-isoaspartate 99.0 6.2E-11 2.1E-15 115.1 1.6 110 193-318 64-176 (210)
119 1nt2_A Fibrillarin-like PRE-rR 99.0 2.6E-11 8.9E-16 119.2 -1.2 97 215-317 58-162 (210)
120 3dxy_A TRNA (guanine-N(7)-)-me 99.0 1.1E-11 3.8E-16 122.6 -4.0 101 215-317 35-151 (218)
121 3gdh_A Trimethylguanosine synt 99.0 1.6E-11 5.6E-16 122.0 -2.8 97 216-315 80-180 (241)
122 4dzr_A Protein-(glutamine-N5) 99.0 3.2E-11 1.1E-15 116.6 -0.8 120 215-345 31-187 (215)
123 3evz_A Methyltransferase; NYSG 99.0 4E-11 1.4E-15 118.2 -0.6 122 215-344 56-200 (230)
124 3iv6_A Putative Zn-dependent a 99.0 1.9E-11 6.6E-16 124.4 -3.0 96 216-318 47-150 (261)
125 2ex4_A Adrenal gland protein A 99.0 1.2E-11 4.2E-16 123.1 -4.4 122 459-585 80-223 (241)
126 3ujc_A Phosphoethanolamine N-m 99.0 1.1E-11 3.7E-16 124.3 -4.9 117 458-581 55-201 (266)
127 3bkw_A MLL3908 protein, S-aden 99.0 2E-11 6.7E-16 120.8 -3.1 97 458-561 43-144 (243)
128 4df3_A Fibrillarin-like rRNA/T 99.0 2.9E-11 9.9E-16 121.0 -1.9 126 213-346 76-213 (233)
129 1nkv_A Hypothetical protein YJ 99.0 1.4E-11 4.8E-16 123.2 -4.2 115 459-581 37-182 (256)
130 3lcc_A Putative methyl chlorid 99.0 2.9E-11 1E-15 119.7 -1.9 116 461-581 69-202 (235)
131 3i53_A O-methyltransferase; CO 99.0 3.1E-11 1E-15 126.4 -1.9 129 214-346 169-317 (332)
132 3dh0_A SAM dependent methyltra 99.0 1.1E-11 3.7E-16 121.1 -5.1 131 460-605 39-193 (219)
133 2yxd_A Probable cobalt-precorr 99.0 8E-11 2.7E-15 110.8 1.1 131 192-347 21-154 (183)
134 2frn_A Hypothetical protein PH 99.0 1.1E-10 3.8E-15 119.5 2.3 121 216-345 127-252 (278)
135 3gwz_A MMCR; methyltransferase 99.0 8.1E-11 2.8E-15 125.3 1.1 128 215-346 203-352 (369)
136 3jwg_A HEN1, methyltransferase 99.0 6.5E-11 2.2E-15 115.8 0.1 141 460-605 31-210 (219)
137 3q7e_A Protein arginine N-meth 99.0 4.8E-11 1.6E-15 126.4 -1.2 99 216-316 68-173 (349)
138 3ggd_A SAM-dependent methyltra 99.0 2E-11 6.8E-16 121.6 -3.9 99 216-317 58-164 (245)
139 2ip2_A Probable phenazine-spec 99.0 1.4E-10 4.7E-15 121.3 2.2 128 216-346 169-318 (334)
140 3fpf_A Mtnas, putative unchara 99.0 6.6E-11 2.3E-15 122.2 -0.2 95 215-316 123-222 (298)
141 1p91_A Ribosomal RNA large sub 99.0 1E-10 3.5E-15 118.1 1.1 92 215-319 86-181 (269)
142 3opn_A Putative hemolysin; str 99.0 2.5E-10 8.5E-15 114.1 3.9 131 460-605 39-202 (232)
143 4htf_A S-adenosylmethionine-de 99.0 2.3E-11 7.8E-16 124.2 -3.8 115 460-581 70-227 (285)
144 3dtn_A Putative methyltransfer 99.0 1.9E-11 6.4E-16 120.7 -4.3 137 460-608 46-229 (234)
145 3thr_A Glycine N-methyltransfe 98.9 2.8E-11 9.7E-16 123.7 -3.2 100 460-563 59-177 (293)
146 2nxc_A L11 mtase, ribosomal pr 98.9 5E-11 1.7E-15 120.5 -1.4 117 216-346 122-240 (254)
147 3q87_B N6 adenine specific DNA 98.9 5.1E-11 1.8E-15 112.8 -1.3 111 216-346 25-145 (170)
148 2pjd_A Ribosomal RNA small sub 98.9 8.9E-12 3.1E-16 131.5 -7.4 101 216-319 198-306 (343)
149 2ipx_A RRNA 2'-O-methyltransfe 98.9 2.5E-11 8.5E-16 120.4 -3.9 127 215-346 78-213 (233)
150 3lpm_A Putative methyltransfer 98.9 1.2E-10 3.9E-15 117.8 0.9 120 215-344 50-195 (259)
151 3uwp_A Histone-lysine N-methyl 98.9 5E-11 1.7E-15 127.7 -1.9 123 185-317 152-289 (438)
152 3htx_A HEN1; HEN1, small RNA m 98.9 1.3E-10 4.3E-15 133.1 1.2 104 215-319 722-837 (950)
153 1l3i_A Precorrin-6Y methyltran 98.9 1.2E-10 4.1E-15 110.3 0.6 130 193-344 20-154 (192)
154 1fbn_A MJ fibrillarin homologu 98.9 5.5E-11 1.9E-15 117.9 -1.8 122 215-346 75-209 (230)
155 2ift_A Putative methylase HI07 98.9 4.4E-11 1.5E-15 116.4 -2.5 101 216-319 55-166 (201)
156 4dcm_A Ribosomal RNA large sub 98.9 1.7E-11 5.7E-16 131.3 -6.1 102 216-319 224-337 (375)
157 1qzz_A RDMB, aclacinomycin-10- 98.9 7E-11 2.4E-15 125.4 -1.2 99 215-317 183-288 (374)
158 2g72_A Phenylethanolamine N-me 98.9 4.2E-11 1.4E-15 122.6 -2.8 145 460-608 73-282 (289)
159 2r3s_A Uncharacterized protein 98.9 8.7E-11 3E-15 122.5 -0.5 129 215-346 166-319 (335)
160 3bxo_A N,N-dimethyltransferase 98.9 4E-11 1.4E-15 118.3 -2.9 117 438-561 22-141 (239)
161 3lst_A CALO1 methyltransferase 98.9 6.6E-11 2.2E-15 124.9 -1.4 127 215-346 185-332 (348)
162 3ocj_A Putative exported prote 98.9 4.2E-11 1.4E-15 123.8 -2.9 133 460-605 120-304 (305)
163 1tw3_A COMT, carminomycin 4-O- 98.9 1.2E-10 4.1E-15 123.0 0.2 128 215-346 184-335 (360)
164 1af7_A Chemotaxis receptor met 98.9 8.9E-11 3E-15 120.3 -0.9 101 215-315 106-251 (274)
165 2i62_A Nicotinamide N-methyltr 98.9 3.3E-11 1.1E-15 120.8 -4.1 144 460-605 58-261 (265)
166 3ou2_A SAM-dependent methyltra 98.9 2.2E-11 7.5E-16 118.3 -5.2 115 460-580 48-199 (218)
167 1ws6_A Methyltransferase; stru 98.9 3.6E-11 1.2E-15 112.2 -3.8 123 187-319 20-150 (171)
168 3v97_A Ribosomal RNA large sub 98.9 9.7E-12 3.3E-16 143.2 -9.4 114 460-579 541-675 (703)
169 2xvm_A Tellurite resistance pr 98.9 9.7E-12 3.3E-16 119.1 -8.0 114 460-581 34-168 (199)
170 2pwy_A TRNA (adenine-N(1)-)-me 98.9 1.8E-10 6.2E-15 115.2 0.6 117 216-346 98-220 (258)
171 1pjz_A Thiopurine S-methyltran 98.9 1.8E-11 6.1E-16 119.4 -6.7 116 460-581 24-171 (203)
172 3r0q_C Probable protein argini 98.9 1.9E-10 6.6E-15 123.0 0.7 99 215-317 64-170 (376)
173 2fyt_A Protein arginine N-meth 98.9 1.6E-10 5.4E-15 122.0 0.0 98 216-315 66-170 (340)
174 2o57_A Putative sarcosine dime 98.9 1.9E-11 6.6E-16 125.3 -6.8 116 458-581 82-229 (297)
175 1vbf_A 231AA long hypothetical 98.9 2.1E-10 7.3E-15 113.0 0.8 108 193-317 57-166 (231)
176 3ckk_A TRNA (guanine-N(7)-)-me 98.9 6.2E-11 2.1E-15 118.7 -3.1 102 215-317 47-169 (235)
177 3ccf_A Cyclopropane-fatty-acyl 98.9 3.4E-11 1.2E-15 122.6 -5.2 96 459-562 58-155 (279)
178 1yb2_A Hypothetical protein TA 98.9 1.1E-10 3.9E-15 118.9 -1.3 116 215-346 111-233 (275)
179 3ege_A Putative methyltransfer 98.9 7.2E-11 2.5E-15 119.2 -2.7 96 459-563 35-132 (261)
180 3ofk_A Nodulation protein S; N 98.9 3E-11 1E-15 117.8 -5.4 106 455-564 48-157 (216)
181 2aot_A HMT, histamine N-methyl 98.9 5.4E-11 1.8E-15 122.2 -3.8 96 460-561 54-172 (292)
182 3bus_A REBM, methyltransferase 98.9 5.7E-11 2E-15 120.0 -3.7 97 458-562 61-167 (273)
183 3mcz_A O-methyltransferase; ad 98.9 1.1E-10 3.9E-15 122.8 -1.8 130 215-346 180-335 (352)
184 2fhp_A Methylase, putative; al 98.9 1.2E-10 4.2E-15 110.3 -1.5 123 187-319 24-157 (187)
185 3d2l_A SAM-dependent methyltra 98.9 9.3E-11 3.2E-15 115.9 -2.5 95 460-559 35-135 (243)
186 3g89_A Ribosomal RNA small sub 98.9 1.5E-10 5.2E-15 116.8 -1.1 119 215-345 81-207 (249)
187 1x19_A CRTF-related protein; m 98.9 3E-10 1E-14 120.2 1.1 98 215-316 191-295 (359)
188 2b3t_A Protein methyltransfera 98.9 7.1E-10 2.4E-14 113.0 3.8 120 216-346 111-259 (276)
189 1vl5_A Unknown conserved prote 98.9 3.2E-11 1.1E-15 121.2 -6.2 97 458-562 37-141 (260)
190 3hem_A Cyclopropane-fatty-acyl 98.9 4.9E-11 1.7E-15 122.9 -5.1 102 458-562 72-184 (302)
191 3mb5_A SAM-dependent methyltra 98.9 4.3E-10 1.5E-14 112.7 1.7 116 215-346 94-218 (255)
192 2fk8_A Methoxy mycolic acid sy 98.9 4.6E-11 1.6E-15 123.9 -5.6 99 459-562 91-195 (318)
193 4dzr_A Protein-(glutamine-N5) 98.9 5.3E-10 1.8E-14 107.9 2.3 137 460-605 32-205 (215)
194 3fzg_A 16S rRNA methylase; met 98.9 8.6E-11 2.9E-15 113.5 -3.6 96 216-314 51-150 (200)
195 3id6_C Fibrillarin-like rRNA/T 98.8 1.1E-10 3.8E-15 116.8 -3.2 126 214-346 76-212 (232)
196 1dl5_A Protein-L-isoaspartate 98.8 4.7E-10 1.6E-14 116.9 1.3 109 193-317 62-176 (317)
197 3cc8_A Putative methyltransfer 98.8 7E-11 2.4E-15 115.4 -4.7 95 458-562 32-131 (230)
198 2yqz_A Hypothetical protein TT 98.8 8.1E-11 2.8E-15 117.8 -4.4 94 459-560 40-140 (263)
199 2qe6_A Uncharacterized protein 98.8 2.8E-10 9.6E-15 116.5 -0.8 102 216-319 79-199 (274)
200 2ld4_A Anamorsin; methyltransf 98.8 3.9E-11 1.3E-15 113.6 -6.8 113 214-342 12-128 (176)
201 3m70_A Tellurite resistance pr 98.8 6.2E-11 2.1E-15 121.0 -6.0 113 460-581 122-255 (286)
202 2yxe_A Protein-L-isoaspartate 98.8 7E-10 2.4E-14 108.0 1.7 110 193-318 64-179 (215)
203 3sm3_A SAM-dependent methyltra 98.8 1.1E-10 3.8E-15 114.5 -4.0 115 460-581 32-202 (235)
204 3bwc_A Spermidine synthase; SA 98.8 2.2E-10 7.4E-15 119.1 -2.2 126 215-345 96-235 (304)
205 2y1w_A Histone-arginine methyl 98.8 7E-10 2.4E-14 117.3 1.6 115 193-318 37-157 (348)
206 3sso_A Methyltransferase; macr 98.8 2.2E-10 7.5E-15 122.5 -2.3 93 215-318 217-326 (419)
207 1ej0_A FTSJ; methyltransferase 98.8 2.5E-10 8.6E-15 106.2 -1.7 91 216-318 24-138 (180)
208 2esr_A Methyltransferase; stru 98.8 1.3E-10 4.4E-15 109.8 -3.8 118 192-319 16-141 (177)
209 3mgg_A Methyltransferase; NYSG 98.8 8.9E-11 3E-15 118.9 -5.3 111 445-562 24-143 (276)
210 1i9g_A Hypothetical protein RV 98.8 7.4E-10 2.5E-14 112.5 1.5 98 216-319 101-206 (280)
211 1i1n_A Protein-L-isoaspartate 98.8 4.9E-10 1.7E-14 110.2 0.0 95 215-317 78-183 (226)
212 2fpo_A Methylase YHHF; structu 98.8 2.7E-10 9.1E-15 110.9 -1.9 120 191-320 38-164 (202)
213 3iv6_A Putative Zn-dependent a 98.8 9.5E-11 3.2E-15 119.3 -5.7 127 431-563 6-150 (261)
214 3kkz_A Uncharacterized protein 98.8 2.3E-10 7.8E-15 115.6 -2.8 116 459-581 47-191 (267)
215 1g6q_1 HnRNP arginine N-methyl 98.8 4.9E-10 1.7E-14 117.5 -0.6 113 193-315 25-144 (328)
216 3g2m_A PCZA361.24; SAM-depende 98.8 2.9E-10 1E-14 116.9 -2.3 97 461-562 85-191 (299)
217 2p35_A Trans-aconitate 2-methy 98.8 1.8E-10 6.1E-15 115.2 -3.9 97 458-562 33-133 (259)
218 3reo_A (ISO)eugenol O-methyltr 98.8 4.1E-10 1.4E-14 120.0 -1.4 122 215-346 204-351 (368)
219 3cgg_A SAM-dependent methyltra 98.8 2.6E-10 9E-15 108.2 -2.7 139 460-605 48-195 (195)
220 2gb4_A Thiopurine S-methyltran 98.8 1E-10 3.6E-15 118.3 -6.0 116 460-581 70-222 (252)
221 2h00_A Methyltransferase 10 do 98.8 1E-09 3.5E-14 110.0 1.3 100 215-315 66-191 (254)
222 1xdz_A Methyltransferase GIDB; 98.8 1.2E-09 4.1E-14 108.9 1.7 140 459-611 71-225 (240)
223 3adn_A Spermidine synthase; am 98.8 1.2E-09 4.3E-14 112.9 1.8 102 215-317 84-199 (294)
224 3mti_A RRNA methylase; SAM-dep 98.8 3.2E-10 1.1E-14 107.8 -2.4 119 460-581 24-164 (185)
225 3f4k_A Putative methyltransfer 98.8 1.5E-10 5E-15 115.8 -5.1 115 460-581 48-191 (257)
226 1xxl_A YCGJ protein; structura 98.8 1.3E-10 4.5E-15 115.6 -5.5 97 458-562 21-125 (239)
227 1jg1_A PIMT;, protein-L-isoasp 98.8 1.1E-09 3.9E-14 108.6 1.2 109 193-318 78-191 (235)
228 3grz_A L11 mtase, ribosomal pr 98.8 2.9E-10 9.8E-15 110.1 -3.1 112 460-581 62-180 (205)
229 3p9c_A Caffeic acid O-methyltr 98.8 6E-10 2E-14 118.5 -0.9 122 215-346 202-349 (364)
230 1r18_A Protein-L-isoaspartate( 98.8 1.1E-09 3.7E-14 108.1 1.0 95 215-317 85-195 (227)
231 1jsx_A Glucose-inhibited divis 98.8 5E-10 1.7E-14 108.3 -1.5 93 216-315 67-164 (207)
232 3gu3_A Methyltransferase; alph 98.8 2.5E-10 8.5E-15 116.8 -3.9 98 458-563 22-128 (284)
233 3dmg_A Probable ribosomal RNA 98.8 2.9E-10 1E-14 121.8 -3.9 101 460-563 235-342 (381)
234 2oxt_A Nucleoside-2'-O-methylt 98.8 1.1E-09 3.9E-14 111.5 0.7 100 215-318 75-187 (265)
235 2wa2_A Non-structural protein 98.8 5.8E-10 2E-14 114.4 -1.6 100 215-318 83-195 (276)
236 1fp1_D Isoliquiritigenin 2'-O- 98.8 5.9E-10 2E-14 118.6 -1.6 91 215-316 210-306 (372)
237 3fpf_A Mtnas, putative unchara 98.8 1.7E-10 6E-15 119.0 -5.5 129 459-604 123-263 (298)
238 3u81_A Catechol O-methyltransf 98.7 5.6E-10 1.9E-14 109.8 -1.7 100 216-318 60-172 (221)
239 3dp7_A SAM-dependent methyltra 98.7 4.3E-10 1.5E-14 119.5 -2.8 138 457-605 178-355 (363)
240 3i53_A O-methyltransferase; CO 98.7 9.9E-10 3.4E-14 114.9 0.0 138 454-604 165-331 (332)
241 1ixk_A Methyltransferase; open 98.7 8E-10 2.7E-14 115.3 -0.9 124 216-345 120-270 (315)
242 2avn_A Ubiquinone/menaquinone 98.7 3.5E-10 1.2E-14 114.0 -3.6 99 459-564 55-155 (260)
243 2pbf_A Protein-L-isoaspartate 98.7 8.5E-10 2.9E-14 108.5 -0.8 96 216-318 82-195 (227)
244 1u2z_A Histone-lysine N-methyl 98.7 1.2E-09 4E-14 118.7 0.2 115 192-316 228-359 (433)
245 3jwh_A HEN1; methyltransferase 98.7 1.8E-10 6.1E-15 112.6 -5.9 118 460-580 31-186 (217)
246 1o54_A SAM-dependent O-methylt 98.7 1.5E-09 5.3E-14 110.4 0.6 114 216-345 114-234 (277)
247 2gs9_A Hypothetical protein TT 98.7 2.4E-10 8.4E-15 110.8 -5.1 95 459-563 37-134 (211)
248 2bm8_A Cephalosporin hydroxyla 98.7 1E-09 3.5E-14 109.7 -0.9 93 216-317 83-188 (236)
249 4fsd_A Arsenic methyltransfera 98.7 3.6E-10 1.2E-14 121.0 -4.6 115 460-581 85-246 (383)
250 2vdv_E TRNA (guanine-N(7)-)-me 98.7 7.9E-10 2.7E-14 110.7 -1.9 101 215-316 50-173 (246)
251 3hm2_A Precorrin-6Y C5,15-meth 98.7 1.1E-09 3.9E-14 102.8 -0.7 110 460-580 27-147 (178)
252 3vc1_A Geranyl diphosphate 2-C 98.7 4.9E-10 1.7E-14 116.1 -3.8 117 457-581 116-264 (312)
253 1g8a_A Fibrillarin-like PRE-rR 98.7 7.6E-10 2.6E-14 109.0 -2.3 96 215-315 74-177 (227)
254 1o9g_A RRNA methyltransferase; 98.7 9.3E-10 3.2E-14 110.3 -1.6 101 215-315 52-213 (250)
255 1xj5_A Spermidine synthase 1; 98.7 2.1E-09 7.2E-14 113.2 0.8 101 215-316 121-235 (334)
256 3g89_A Ribosomal RNA small sub 98.7 2.1E-09 7.3E-14 108.3 0.7 165 434-612 57-236 (249)
257 3g5t_A Trans-aconitate 3-methy 98.7 2.8E-10 9.5E-15 117.1 -5.9 94 458-559 36-147 (299)
258 1fp2_A Isoflavone O-methyltran 98.7 1E-09 3.5E-14 115.8 -1.8 91 216-317 190-289 (352)
259 3orh_A Guanidinoacetate N-meth 98.7 4.9E-10 1.7E-14 111.8 -4.2 101 460-562 62-171 (236)
260 3a27_A TYW2, uncharacterized p 98.7 3.1E-09 1.1E-13 108.5 1.5 97 216-319 121-222 (272)
261 3dr5_A Putative O-methyltransf 98.7 1.3E-09 4.6E-14 107.8 -1.2 98 216-318 58-165 (221)
262 2ozv_A Hypothetical protein AT 98.7 8.6E-10 2.9E-14 111.8 -2.6 103 215-318 37-172 (260)
263 2vdw_A Vaccinia virus capping 98.7 3.7E-10 1.3E-14 117.3 -5.6 101 460-563 50-171 (302)
264 1dus_A MJ0882; hypothetical pr 98.7 6.1E-10 2.1E-14 105.5 -3.6 130 459-604 53-193 (194)
265 3g07_A 7SK snRNA methylphospha 98.7 2.7E-10 9.4E-15 117.3 -6.6 87 518-605 175-287 (292)
266 2pxx_A Uncharacterized protein 98.7 3.4E-10 1.2E-14 109.4 -5.6 134 460-604 44-197 (215)
267 3ntv_A MW1564 protein; rossman 98.7 8E-10 2.7E-14 109.8 -3.2 96 216-316 73-176 (232)
268 3bzb_A Uncharacterized protein 98.7 1.1E-09 3.9E-14 112.1 -2.2 127 216-346 81-233 (281)
269 3tfw_A Putative O-methyltransf 98.7 1.1E-09 3.7E-14 110.1 -2.4 98 216-318 65-172 (248)
270 3mcz_A O-methyltransferase; ad 98.7 1.4E-09 4.7E-14 114.5 -1.8 138 454-605 174-349 (352)
271 2plw_A Ribosomal RNA methyltra 98.7 2.4E-09 8.3E-14 103.0 0.0 90 216-317 24-155 (201)
272 3lpm_A Putative methyltransfer 98.7 1.3E-09 4.4E-14 110.0 -2.0 120 460-581 51-196 (259)
273 3b3j_A Histone-arginine methyl 98.7 2E-09 6.7E-14 118.8 -0.8 98 216-316 160-263 (480)
274 3giw_A Protein of unknown func 98.7 1.1E-09 3.8E-14 111.8 -2.8 103 215-318 79-202 (277)
275 4azs_A Methyltransferase WBDD; 98.7 4.8E-10 1.6E-14 126.3 -6.1 98 215-314 67-171 (569)
276 3tma_A Methyltransferase; thum 98.7 3.1E-09 1E-13 112.4 0.3 102 216-318 205-319 (354)
277 3dou_A Ribosomal RNA large sub 98.7 6E-09 2E-13 100.8 2.3 136 460-605 27-181 (191)
278 3r3h_A O-methyltransferase, SA 98.6 1.5E-09 5.3E-14 108.8 -2.1 96 216-316 62-170 (242)
279 4a6d_A Hydroxyindole O-methylt 98.6 1.2E-09 4.2E-14 115.6 -3.0 129 215-346 180-330 (353)
280 2igt_A SAM dependent methyltra 98.6 9.7E-10 3.3E-14 115.7 -4.2 104 215-319 154-275 (332)
281 1yub_A Ermam, rRNA methyltrans 98.6 3.7E-09 1.3E-13 105.9 0.2 111 194-316 17-145 (245)
282 3c3p_A Methyltransferase; NP_9 98.6 1.3E-09 4.5E-14 106.1 -3.2 95 216-316 58-160 (210)
283 3lst_A CALO1 methyltransferase 98.6 6.6E-09 2.3E-13 109.5 2.0 138 454-604 180-347 (348)
284 1zx0_A Guanidinoacetate N-meth 98.6 8.6E-10 3E-14 109.4 -4.8 102 460-564 62-173 (236)
285 1ve3_A Hypothetical protein PH 98.6 7.5E-10 2.6E-14 108.2 -5.4 97 460-563 40-144 (227)
286 2ip2_A Probable phenazine-spec 98.6 4.1E-09 1.4E-13 110.0 -0.1 134 455-604 165-333 (334)
287 1nt2_A Fibrillarin-like PRE-rR 98.6 2.6E-09 8.8E-14 104.9 -1.7 131 461-604 60-209 (210)
288 2nxc_A L11 mtase, ribosomal pr 98.6 1.6E-09 5.6E-14 109.3 -3.2 125 460-604 122-254 (254)
289 3gwz_A MMCR; methyltransferase 98.6 3.5E-09 1.2E-13 112.7 -0.9 141 454-605 198-369 (369)
290 1ej0_A FTSJ; methyltransferase 98.6 4.9E-09 1.7E-13 97.3 0.1 138 460-605 24-178 (180)
291 1x19_A CRTF-related protein; m 98.6 1.6E-09 5.5E-14 114.6 -3.7 138 455-605 187-359 (359)
292 2kw5_A SLR1183 protein; struct 98.6 2.2E-09 7.7E-14 103.3 -2.4 111 461-581 32-166 (202)
293 1zg3_A Isoflavanone 4'-O-methy 98.6 2.7E-09 9.3E-14 112.8 -2.1 91 216-317 195-294 (358)
294 2yvl_A TRMI protein, hypotheti 98.6 7.5E-09 2.6E-13 102.7 1.0 97 216-319 93-193 (248)
295 2qm3_A Predicted methyltransfe 98.6 9.3E-09 3.2E-13 109.7 1.8 123 215-345 173-304 (373)
296 3m33_A Uncharacterized protein 98.6 1.3E-09 4.5E-14 107.5 -4.7 108 460-580 50-161 (226)
297 3q87_B N6 adenine specific DNA 98.6 6.1E-09 2.1E-13 98.4 -0.1 112 461-581 26-144 (170)
298 2p8j_A S-adenosylmethionine-de 98.6 6.1E-10 2.1E-14 107.6 -7.2 97 460-562 25-129 (209)
299 1qzz_A RDMB, aclacinomycin-10- 98.6 1.9E-09 6.6E-14 114.2 -4.0 142 457-606 181-357 (374)
300 2b25_A Hypothetical protein; s 98.6 6.5E-09 2.2E-13 108.9 -0.0 96 216-317 107-220 (336)
301 3lec_A NADB-rossmann superfami 98.6 4.9E-09 1.7E-13 104.5 -1.1 118 216-347 23-146 (230)
302 1wzn_A SAM-dependent methyltra 98.6 1.7E-09 6E-14 107.7 -4.4 97 459-561 42-145 (252)
303 2b3t_A Protein methyltransfera 98.6 4.2E-09 1.4E-13 107.3 -1.8 134 460-604 111-275 (276)
304 2o07_A Spermidine synthase; st 98.6 7.1E-09 2.4E-13 107.7 -0.2 101 215-316 96-209 (304)
305 3eey_A Putative rRNA methylase 98.6 1.5E-09 5.1E-14 104.2 -5.0 139 461-606 25-189 (197)
306 2yxl_A PH0851 protein, 450AA l 98.6 7.6E-09 2.6E-13 113.2 -0.0 123 216-344 261-413 (450)
307 2b2c_A Spermidine synthase; be 98.6 3.5E-09 1.2E-13 110.5 -2.6 100 216-316 110-222 (314)
308 1l3i_A Precorrin-6Y methyltran 98.6 1.8E-09 6.2E-14 102.1 -4.4 110 460-580 35-154 (192)
309 1jsx_A Glucose-inhibited divis 98.6 2E-09 6.9E-14 104.0 -4.2 130 460-605 67-205 (207)
310 3gnl_A Uncharacterized protein 98.6 6.1E-09 2.1E-13 104.7 -0.9 117 216-346 23-145 (244)
311 2gpy_A O-methyltransferase; st 98.5 3.7E-09 1.3E-13 104.6 -2.7 97 216-317 56-161 (233)
312 3evz_A Methyltransferase; NYSG 98.5 3.5E-09 1.2E-13 104.1 -2.8 136 460-604 57-219 (230)
313 3ggd_A SAM-dependent methyltra 98.5 6.2E-10 2.1E-14 110.6 -8.4 99 460-563 58-165 (245)
314 4hc4_A Protein arginine N-meth 98.5 7.1E-09 2.4E-13 110.7 -0.8 97 216-315 85-188 (376)
315 2plw_A Ribosomal RNA methyltra 98.5 9.6E-09 3.3E-13 98.7 0.1 136 460-604 24-195 (201)
316 3duw_A OMT, O-methyltransferas 98.5 3E-09 1E-13 104.3 -3.6 98 216-318 60-169 (223)
317 2i7c_A Spermidine synthase; tr 98.5 4.8E-09 1.6E-13 107.7 -2.2 103 215-318 79-194 (283)
318 2p41_A Type II methyltransfera 98.5 3.8E-09 1.3E-13 109.9 -3.1 98 215-317 83-192 (305)
319 1inl_A Spermidine synthase; be 98.5 6.1E-09 2.1E-13 107.7 -1.7 101 216-317 92-206 (296)
320 3tr6_A O-methyltransferase; ce 98.5 3.3E-09 1.1E-13 104.0 -3.7 97 216-317 66-175 (225)
321 3fzg_A 16S rRNA methylase; met 98.5 3.6E-09 1.2E-13 102.1 -3.4 130 459-604 50-197 (200)
322 3m6w_A RRNA methylase; rRNA me 98.5 5.2E-09 1.8E-13 114.6 -2.8 125 215-345 102-254 (464)
323 1zq9_A Probable dimethyladenos 98.5 2.7E-08 9.1E-13 102.3 2.6 111 193-314 15-145 (285)
324 3tm4_A TRNA (guanine N2-)-meth 98.5 1E-08 3.5E-13 109.5 -0.6 117 216-346 219-348 (373)
325 1iy9_A Spermidine synthase; ro 98.5 7.3E-09 2.5E-13 106.0 -1.7 102 215-317 76-190 (275)
326 2r3s_A Uncharacterized protein 98.5 3.2E-09 1.1E-13 110.6 -4.5 137 457-605 164-335 (335)
327 2yxd_A Probable cobalt-precorr 98.5 5.7E-09 1.9E-13 98.0 -2.4 106 460-580 37-151 (183)
328 3gjy_A Spermidine synthase; AP 98.5 4E-09 1.4E-13 110.0 -3.8 124 192-317 68-201 (317)
329 3mq2_A 16S rRNA methyltransfer 98.5 7.4E-09 2.5E-13 101.1 -1.7 114 460-581 29-179 (218)
330 3ajd_A Putative methyltransfer 98.5 5.2E-09 1.8E-13 106.8 -3.0 106 216-322 85-217 (274)
331 1uir_A Polyamine aminopropyltr 98.5 4.3E-09 1.5E-13 109.7 -3.8 101 215-316 78-195 (314)
332 1sui_A Caffeoyl-COA O-methyltr 98.5 7.3E-09 2.5E-13 104.2 -2.1 96 216-316 81-190 (247)
333 3e05_A Precorrin-6Y C5,15-meth 98.5 5.8E-09 2E-13 100.9 -2.8 110 459-579 41-161 (204)
334 3sso_A Methyltransferase; macr 98.5 3E-09 1E-13 113.8 -5.2 124 443-580 203-361 (419)
335 1ri5_A MRNA capping enzyme; me 98.5 1.3E-09 4.3E-14 111.1 -7.9 102 460-563 66-176 (298)
336 1tw3_A COMT, carminomycin 4-O- 98.5 5E-09 1.7E-13 110.6 -3.6 141 457-605 182-356 (360)
337 2nyu_A Putative ribosomal RNA 98.5 1.3E-08 4.5E-13 97.2 -0.9 91 216-317 24-146 (196)
338 2oxt_A Nucleoside-2'-O-methylt 98.5 3.7E-09 1.3E-13 107.7 -5.1 98 460-562 76-186 (265)
339 3p2e_A 16S rRNA methylase; met 98.5 5.9E-09 2E-13 103.5 -3.6 118 460-581 26-180 (225)
340 3kr9_A SAM-dependent methyltra 98.5 1.3E-08 4.3E-13 101.2 -1.2 117 216-347 17-140 (225)
341 2pt6_A Spermidine synthase; tr 98.5 5.6E-09 1.9E-13 109.3 -4.0 100 216-316 118-230 (321)
342 2cmg_A Spermidine synthase; tr 98.5 2.3E-08 8E-13 101.6 0.5 93 215-316 73-171 (262)
343 1sqg_A SUN protein, FMU protei 98.5 2.5E-08 8.6E-13 108.3 0.7 104 216-320 248-378 (429)
344 3bgv_A MRNA CAP guanine-N7 met 98.4 3.9E-09 1.3E-13 109.3 -5.7 103 460-564 36-158 (313)
345 1yb2_A Hypothetical protein TA 98.4 1.8E-08 6.1E-13 102.6 -0.7 110 457-581 109-232 (275)
346 4dcm_A Ribosomal RNA large sub 98.4 1E-08 3.4E-13 109.7 -2.8 100 460-562 224-335 (375)
347 3bkx_A SAM-dependent methyltra 98.4 1.9E-08 6.4E-13 101.5 -0.7 95 459-561 44-159 (275)
348 2fca_A TRNA (guanine-N(7)-)-me 98.4 1.2E-08 4E-13 100.2 -2.3 117 461-580 41-173 (213)
349 3tfw_A Putative O-methyltransf 98.4 8E-09 2.7E-13 103.7 -3.5 95 459-563 64-172 (248)
350 1mjf_A Spermidine synthase; sp 98.4 9.1E-09 3.1E-13 105.5 -3.2 98 216-316 77-193 (281)
351 3cbg_A O-methyltransferase; cy 98.4 1.5E-08 5.2E-13 100.5 -1.6 97 216-317 74-183 (232)
352 2b78_A Hypothetical protein SM 98.4 5.9E-09 2E-13 111.8 -4.9 103 216-319 214-334 (385)
353 2ozv_A Hypothetical protein AT 98.4 1.2E-08 4E-13 103.4 -2.6 117 460-580 38-188 (260)
354 2p41_A Type II methyltransfera 98.4 7.1E-09 2.4E-13 107.8 -4.3 100 460-562 84-192 (305)
355 2bm8_A Cephalosporin hydroxyla 98.4 2.4E-08 8.1E-13 99.8 -0.4 111 460-580 83-213 (236)
356 3njr_A Precorrin-6Y methylase; 98.4 8.9E-09 3E-13 100.4 -3.5 109 460-580 57-174 (204)
357 2nyu_A Putative ribosomal RNA 98.4 2.1E-08 7.2E-13 95.8 -0.8 139 460-604 24-186 (196)
358 1ne2_A Hypothetical protein TA 98.4 2.9E-08 9.8E-13 95.6 0.1 107 215-341 52-162 (200)
359 3ckk_A TRNA (guanine-N(7)-)-me 98.4 8.8E-09 3E-13 102.9 -3.7 118 460-580 48-189 (235)
360 1nv8_A HEMK protein; class I a 98.4 3.8E-08 1.3E-12 101.1 0.9 98 216-316 125-249 (284)
361 3gdh_A Trimethylguanosine synt 98.4 1.4E-09 4.8E-14 107.9 -9.6 95 460-561 80-181 (241)
362 2frn_A Hypothetical protein PH 98.4 1E-08 3.4E-13 104.9 -3.8 111 460-580 127-251 (278)
363 3dou_A Ribosomal RNA large sub 98.4 2.4E-08 8.2E-13 96.5 -0.9 92 215-317 26-140 (191)
364 2wa2_A Non-structural protein 98.4 9.1E-09 3.1E-13 105.5 -4.4 97 460-561 84-193 (276)
365 4dmg_A Putative uncharacterize 98.4 1.6E-08 5.5E-13 108.7 -2.6 103 215-318 215-328 (393)
366 1wy7_A Hypothetical protein PH 98.4 6.5E-08 2.2E-12 93.4 1.8 116 215-344 50-169 (207)
367 2hnk_A SAM-dependent O-methylt 98.4 9.6E-09 3.3E-13 102.1 -4.2 96 216-316 62-181 (239)
368 3reo_A (ISO)eugenol O-methyltr 98.4 4.7E-08 1.6E-12 104.0 0.8 120 456-585 201-353 (368)
369 3mb5_A SAM-dependent methyltra 98.4 4.6E-08 1.6E-12 97.7 0.7 108 460-581 95-217 (255)
370 3lcv_B Sisomicin-gentamicin re 98.4 5.5E-08 1.9E-12 98.1 1.2 125 215-342 133-264 (281)
371 3k6r_A Putative transferase PH 98.4 8.1E-08 2.8E-12 98.4 2.4 151 175-344 96-251 (278)
372 4a6d_A Hydroxyindole O-methylt 98.4 1.2E-08 4.1E-13 108.0 -3.9 140 454-605 175-346 (353)
373 1yzh_A TRNA (guanine-N(7)-)-me 98.4 1.3E-08 4.5E-13 99.3 -3.5 118 461-581 44-177 (214)
374 2qe6_A Uncharacterized protein 98.4 1.1E-08 3.7E-13 104.6 -4.4 101 458-563 77-198 (274)
375 3r0q_C Probable protein argini 98.4 1.5E-08 5E-13 108.3 -3.6 115 444-562 49-170 (376)
376 1fbn_A MJ fibrillarin homologu 98.4 1.4E-08 5E-13 100.3 -3.4 129 460-605 76-228 (230)
377 2ld4_A Anamorsin; methyltransf 98.4 4.2E-09 1.4E-13 99.4 -7.0 87 519-612 62-175 (176)
378 3q7e_A Protein arginine N-meth 98.4 9.7E-09 3.3E-13 108.6 -5.1 97 460-560 68-172 (349)
379 3ntv_A MW1564 protein; rossman 98.4 2.1E-08 7.2E-13 99.4 -2.4 92 459-560 72-175 (232)
380 2frx_A Hypothetical protein YE 98.4 2.7E-08 9.1E-13 109.7 -1.9 121 214-340 117-265 (479)
381 3c0k_A UPF0064 protein YCCW; P 98.4 3.1E-08 1.1E-12 106.4 -1.5 123 216-342 222-362 (396)
382 2avd_A Catechol-O-methyltransf 98.4 9.5E-09 3.2E-13 101.0 -5.2 96 216-316 71-179 (229)
383 3p9n_A Possible methyltransfer 98.3 6.4E-09 2.2E-13 99.4 -6.6 99 460-563 46-155 (189)
384 4df3_A Fibrillarin-like rRNA/T 98.3 2.1E-08 7E-13 100.2 -3.2 124 461-593 80-221 (233)
385 3tr6_A O-methyltransferase; ce 98.3 1.5E-08 5.1E-13 99.3 -4.3 94 460-563 66-176 (225)
386 3r3h_A O-methyltransferase, SA 98.3 2.5E-08 8.4E-13 100.0 -2.8 95 459-563 61-172 (242)
387 3frh_A 16S rRNA methylase; met 98.3 3.6E-08 1.2E-12 98.5 -1.7 99 214-314 105-204 (253)
388 2y1w_A Histone-arginine methyl 98.3 1.9E-08 6.5E-13 106.2 -4.1 97 459-560 51-154 (348)
389 1wxx_A TT1595, hypothetical pr 98.3 1.8E-08 6.1E-13 107.8 -4.6 105 214-319 209-328 (382)
390 3m4x_A NOL1/NOP2/SUN family pr 98.3 1.8E-08 6.2E-13 110.2 -4.8 125 216-346 107-259 (456)
391 3bwc_A Spermidine synthase; SA 98.3 4.5E-08 1.6E-12 101.5 -1.6 144 459-605 96-258 (304)
392 2as0_A Hypothetical protein PH 98.3 1.4E-08 4.6E-13 109.2 -5.9 103 216-319 219-338 (396)
393 3c3y_A Pfomt, O-methyltransfer 98.3 2.4E-08 8.2E-13 99.6 -3.7 96 216-316 72-181 (237)
394 2h1r_A Dimethyladenosine trans 98.3 8.8E-08 3E-12 99.1 0.3 84 193-287 29-115 (299)
395 2fyt_A Protein arginine N-meth 98.3 2.2E-08 7.4E-13 105.5 -4.3 95 460-558 66-168 (340)
396 3id6_C Fibrillarin-like rRNA/T 98.3 1.8E-08 6.3E-13 100.6 -4.6 133 460-606 78-232 (232)
397 2ipx_A RRNA 2'-O-methyltransfe 98.3 4.1E-08 1.4E-12 97.0 -2.3 132 460-605 79-232 (233)
398 1g6q_1 HnRNP arginine N-methyl 98.3 1.8E-08 6.3E-13 105.5 -5.2 96 460-559 40-143 (328)
399 3u81_A Catechol O-methyltransf 98.3 1.4E-08 4.7E-13 99.8 -5.8 97 459-563 59-172 (221)
400 1ws6_A Methyltransferase; stru 98.3 1.1E-08 3.8E-13 95.2 -6.6 95 461-564 44-150 (171)
401 2ih2_A Modification methylase 98.2 2.3E-07 8E-12 99.6 2.1 129 192-342 25-186 (421)
402 2pwy_A TRNA (adenine-N(1)-)-me 98.2 3.6E-08 1.2E-12 98.3 -4.0 107 460-580 98-218 (258)
403 3dxy_A TRNA (guanine-N(7)-)-me 98.2 4.4E-08 1.5E-12 96.6 -3.4 118 460-580 36-171 (218)
404 1g8a_A Fibrillarin-like PRE-rR 98.2 5E-08 1.7E-12 95.8 -3.1 129 460-605 75-227 (227)
405 3duw_A OMT, O-methyltransferas 98.2 6.6E-08 2.3E-12 94.6 -2.3 94 460-563 60-169 (223)
406 1fp1_D Isoliquiritigenin 2'-O- 98.2 3.8E-08 1.3E-12 104.6 -4.3 96 457-561 208-306 (372)
407 3htx_A HEN1; HEN1, small RNA m 98.2 3.8E-08 1.3E-12 112.9 -4.6 101 460-563 723-836 (950)
408 2f8l_A Hypothetical protein LM 98.2 1.1E-07 3.8E-12 100.0 -0.9 123 214-342 130-278 (344)
409 1qam_A ERMC' methyltransferase 98.2 1.1E-07 3.7E-12 95.5 -1.1 80 193-282 17-99 (244)
410 3v97_A Ribosomal RNA large sub 98.2 8.3E-08 2.9E-12 110.5 -2.3 103 216-319 541-660 (703)
411 2ift_A Putative methylase HI07 98.2 2E-08 6.7E-13 97.5 -6.6 98 461-565 56-167 (201)
412 1p91_A Ribosomal RNA large sub 98.2 2.4E-08 8.2E-13 100.7 -6.4 91 460-564 87-181 (269)
413 3dr5_A Putative O-methyltransf 98.2 3.5E-08 1.2E-12 97.5 -5.0 128 461-606 59-214 (221)
414 2esr_A Methyltransferase; stru 98.2 2.5E-08 8.6E-13 93.9 -5.9 98 460-564 33-141 (177)
415 1fp2_A Isoflavone O-methyltran 98.2 5.7E-08 2E-12 102.4 -4.0 96 458-562 188-289 (352)
416 3adn_A Spermidine synthase; am 98.2 1.4E-07 5E-12 97.4 -1.0 145 458-606 83-246 (294)
417 2gpy_A O-methyltransferase; st 98.2 4.1E-08 1.4E-12 97.0 -5.1 93 460-562 56-161 (233)
418 1o54_A SAM-dependent O-methylt 98.2 2.1E-07 7.2E-12 94.6 0.1 110 460-581 114-234 (277)
419 2yx1_A Hypothetical protein MJ 98.2 3.6E-07 1.2E-11 96.0 1.7 94 216-319 197-294 (336)
420 1af7_A Chemotaxis receptor met 98.2 3.6E-08 1.2E-12 100.9 -6.0 99 460-564 107-255 (274)
421 1zg3_A Isoflavanone 4'-O-methy 98.2 1.1E-07 3.8E-12 100.4 -2.5 115 458-581 193-342 (358)
422 1uwv_A 23S rRNA (uracil-5-)-me 98.2 7.3E-07 2.5E-11 96.9 3.7 96 216-317 288-390 (433)
423 2xyq_A Putative 2'-O-methyl tr 98.1 1.2E-07 4.2E-12 97.7 -2.8 107 215-344 64-191 (290)
424 3c3p_A Methyltransferase; NP_9 98.1 7.8E-08 2.7E-12 93.4 -4.2 92 460-562 58-161 (210)
425 3gru_A Dimethyladenosine trans 98.1 8.6E-07 2.9E-11 91.6 3.3 84 193-286 37-122 (295)
426 2jjq_A Uncharacterized RNA met 98.1 4.2E-07 1.4E-11 98.7 0.8 96 216-318 292-389 (425)
427 3lbf_A Protein-L-isoaspartate 98.1 4.7E-08 1.6E-12 94.7 -6.1 91 459-563 78-176 (210)
428 1vbf_A 231AA long hypothetical 98.1 5.1E-08 1.8E-12 95.8 -6.0 91 460-564 72-168 (231)
429 3p9c_A Caffeic acid O-methyltr 98.1 2E-07 6.9E-12 99.0 -2.0 98 456-562 199-299 (364)
430 2vdv_E TRNA (guanine-N(7)-)-me 98.1 7.7E-08 2.6E-12 96.2 -5.1 114 460-576 51-189 (246)
431 2fpo_A Methylase YHHF; structu 98.1 8.4E-08 2.9E-12 93.1 -4.9 98 460-564 56-163 (202)
432 1nv8_A HEMK protein; class I a 98.1 2E-07 6.7E-12 95.8 -2.6 128 461-605 126-282 (284)
433 2fhp_A Methylase, putative; al 98.1 4.6E-08 1.6E-12 92.4 -6.9 98 460-564 46-157 (187)
434 1i9g_A Hypothetical protein RV 98.1 1.9E-07 6.6E-12 94.5 -3.0 109 460-580 101-224 (280)
435 3b3j_A Histone-arginine methyl 98.1 1E-07 3.4E-12 105.2 -5.8 97 459-560 159-262 (480)
436 2yvl_A TRMI protein, hypotheti 98.1 2.5E-07 8.7E-12 91.6 -2.4 105 460-576 93-206 (248)
437 2pjd_A Ribosomal RNA small sub 98.0 7.1E-08 2.4E-12 101.5 -6.9 129 460-605 198-337 (343)
438 3uwp_A Histone-lysine N-methyl 98.0 6.9E-08 2.4E-12 103.6 -7.3 115 460-581 175-314 (438)
439 1o9g_A RRNA methyltransferase; 98.0 9.4E-08 3.2E-12 95.6 -6.1 103 460-563 53-216 (250)
440 2hnk_A SAM-dependent O-methylt 98.0 1.2E-07 4.3E-12 94.0 -5.3 92 460-561 62-181 (239)
441 4hc4_A Protein arginine N-meth 98.0 2.4E-07 8.2E-12 98.9 -3.7 112 443-558 68-186 (376)
442 1mjf_A Spermidine synthase; sp 98.0 1.9E-07 6.4E-12 95.7 -4.5 138 460-605 77-239 (281)
443 1iy9_A Spermidine synthase; ro 98.0 4.1E-07 1.4E-11 93.0 -2.3 145 458-606 75-237 (275)
444 2avd_A Catechol-O-methyltransf 98.0 2.8E-07 9.7E-12 90.3 -3.4 93 460-562 71-180 (229)
445 1inl_A Spermidine synthase; be 98.0 5.7E-07 1.9E-11 92.9 -1.4 143 460-606 92-253 (296)
446 2okc_A Type I restriction enzy 98.0 9.4E-07 3.2E-11 96.4 0.2 117 193-319 158-310 (445)
447 3bzb_A Uncharacterized protein 98.0 1.2E-07 4.2E-12 96.9 -6.7 116 460-581 81-232 (281)
448 3cbg_A O-methyltransferase; cy 98.0 5E-07 1.7E-11 89.6 -2.2 93 460-562 74-183 (232)
449 3evf_A RNA-directed RNA polyme 98.0 1E-06 3.5E-11 89.3 0.0 102 216-319 76-187 (277)
450 2qfm_A Spermine synthase; sper 97.9 2.5E-07 8.6E-12 97.8 -5.1 103 214-316 188-314 (364)
451 1sui_A Caffeoyl-COA O-methyltr 97.9 1.1E-07 3.7E-12 95.6 -7.7 93 459-561 80-190 (247)
452 2igt_A SAM dependent methyltra 97.9 2.4E-07 8.1E-12 97.4 -5.6 114 460-580 155-298 (332)
453 1ixk_A Methyltransferase; open 97.9 2.6E-07 8.8E-12 96.3 -5.7 118 460-580 120-269 (315)
454 1ne2_A Hypothetical protein TA 97.9 3.1E-07 1E-11 88.4 -5.2 109 460-577 53-162 (200)
455 1dl5_A Protein-L-isoaspartate 97.9 2.2E-07 7.5E-12 96.7 -7.0 93 460-563 77-177 (317)
456 2yxe_A Protein-L-isoaspartate 97.8 2.9E-07 9.8E-12 89.4 -6.3 91 460-564 79-180 (215)
457 2xyq_A Putative 2'-O-methyl tr 97.8 2.9E-06 1E-10 87.3 0.8 130 460-604 65-210 (290)
458 3tma_A Methyltransferase; thum 97.8 6.1E-07 2.1E-11 94.7 -4.6 117 458-581 203-334 (354)
459 1i1n_A Protein-L-isoaspartate 97.8 2.9E-07 9.9E-12 90.2 -6.7 91 460-563 79-184 (226)
460 3giw_A Protein of unknown func 97.8 5.8E-07 2E-11 91.7 -4.7 102 457-562 77-201 (277)
461 1xj5_A Spermidine synthase 1; 97.8 7.4E-07 2.5E-11 93.7 -4.2 101 458-560 120-234 (334)
462 3fut_A Dimethyladenosine trans 97.8 8.1E-06 2.8E-10 83.3 3.6 81 193-285 34-117 (271)
463 3b5i_A S-adenosyl-L-methionine 97.8 1.8E-06 6.1E-11 92.0 -1.3 48 271-319 143-228 (374)
464 2cmg_A Spermidine synthase; tr 97.8 3.9E-06 1.3E-10 85.1 1.2 91 459-561 73-171 (262)
465 2pt6_A Spermidine synthase; tr 97.8 8.4E-07 2.9E-11 92.7 -3.9 98 460-561 118-230 (321)
466 3bt7_A TRNA (uracil-5-)-methyl 97.8 3.5E-06 1.2E-10 89.5 0.6 93 216-316 215-326 (369)
467 3tqs_A Ribosomal RNA small sub 97.8 6.8E-06 2.3E-10 83.1 2.6 78 193-280 16-99 (255)
468 1m6e_X S-adenosyl-L-methionnin 97.8 1.5E-05 5E-10 84.4 5.3 105 213-318 50-211 (359)
469 2b25_A Hypothetical protein; s 97.8 7.7E-07 2.6E-11 93.1 -4.6 92 460-563 107-221 (336)
470 1u2z_A Histone-lysine N-methyl 97.8 4E-07 1.4E-11 98.9 -7.1 99 459-564 243-362 (433)
471 2o07_A Spermidine synthase; st 97.8 1E-06 3.5E-11 91.4 -3.9 102 459-561 96-209 (304)
472 2h00_A Methyltransferase 10 do 97.8 1.9E-07 6.4E-12 93.4 -9.3 99 460-561 67-192 (254)
473 4azs_A Methyltransferase WBDD; 97.7 5E-07 1.7E-11 101.6 -7.4 96 461-561 69-173 (569)
474 2b2c_A Spermidine synthase; be 97.7 1.3E-06 4.5E-11 91.0 -3.7 100 460-561 110-222 (314)
475 1wy7_A Hypothetical protein PH 97.7 1.2E-06 4E-11 84.5 -4.4 115 460-580 51-169 (207)
476 2i7c_A Spermidine synthase; tr 97.7 1.8E-06 6.1E-11 88.5 -3.4 101 459-562 79-193 (283)
477 1jg1_A PIMT;, protein-L-isoasp 97.7 4.9E-07 1.7E-11 89.4 -7.5 92 460-564 93-192 (235)
478 3a27_A TYW2, uncharacterized p 97.7 1.3E-06 4.5E-11 88.9 -4.5 95 460-564 121-222 (272)
479 1r18_A Protein-L-isoaspartate( 97.7 1.3E-06 4.4E-11 85.9 -4.7 94 460-563 86-196 (227)
480 1uir_A Polyamine aminopropyltr 97.7 1.3E-06 4.5E-11 90.8 -4.9 101 459-561 78-195 (314)
481 4dmg_A Putative uncharacterize 97.7 1.9E-06 6.5E-11 92.5 -3.9 117 460-579 216-350 (393)
482 3ajd_A Putative methyltransfer 97.7 1.3E-06 4.5E-11 88.9 -5.1 113 460-575 85-229 (274)
483 3lcv_B Sisomicin-gentamicin re 97.7 7.5E-06 2.6E-10 82.6 0.5 134 457-604 131-281 (281)
484 2pbf_A Protein-L-isoaspartate 97.6 4.4E-07 1.5E-11 88.9 -8.7 94 460-563 82-195 (227)
485 1zq9_A Probable dimethyladenos 97.6 6.3E-07 2.1E-11 92.0 -7.9 93 460-559 30-145 (285)
486 3gjy_A Spermidine synthase; AP 97.6 1.2E-06 4E-11 91.4 -6.0 100 460-562 91-201 (317)
487 1yub_A Ermam, rRNA methyltrans 97.6 1.2E-06 4.1E-11 87.6 -5.9 99 460-562 31-146 (245)
488 3c3y_A Pfomt, O-methyltransfer 97.6 3.8E-07 1.3E-11 90.9 -9.5 93 459-561 71-181 (237)
489 3ldu_A Putative methylase; str 97.6 5.1E-06 1.7E-10 89.0 -1.5 99 216-316 197-344 (385)
490 2efj_A 3,7-dimethylxanthine me 97.6 2.3E-05 7.9E-10 83.6 3.5 104 215-319 53-228 (384)
491 2b9e_A NOL1/NOP2/SUN domain fa 97.6 1.3E-05 4.3E-10 83.4 1.3 102 216-319 104-237 (309)
492 2b78_A Hypothetical protein SM 97.6 2.9E-06 9.8E-11 90.9 -3.8 120 460-581 214-357 (385)
493 3k0b_A Predicted N6-adenine-sp 97.6 7E-06 2.4E-10 88.1 -1.0 99 216-316 203-350 (393)
494 1wxx_A TT1595, hypothetical pr 97.6 2.7E-06 9.4E-11 90.8 -4.3 112 460-578 211-348 (382)
495 2ih2_A Modification methylase 97.6 2E-05 6.9E-10 84.4 2.3 133 461-604 42-210 (421)
496 3frh_A 16S rRNA methylase; met 97.5 8.3E-06 2.8E-10 81.5 -1.0 133 457-605 104-252 (253)
497 2ar0_A M.ecoki, type I restric 97.5 6.9E-06 2.4E-10 91.8 -2.4 119 193-320 156-316 (541)
498 3c0k_A UPF0064 protein YCCW; P 97.5 1.4E-06 4.9E-11 93.4 -8.0 117 460-578 222-362 (396)
499 3ldg_A Putative uncharacterize 97.5 1.4E-05 4.8E-10 85.5 -0.6 100 216-317 196-344 (384)
500 3uzu_A Ribosomal RNA small sub 97.4 3.2E-05 1.1E-09 79.2 1.8 72 193-276 29-106 (279)
No 1
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.56 E-value=1.1e-16 Score=162.85 Aligned_cols=131 Identities=20% Similarity=0.240 Sum_probs=92.2
Q ss_pred cCCCCccccCchhhHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHH
Q 007128 180 FPGGGTHFHYGADKYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALE 257 (617)
Q Consensus 180 Fpgg~~~F~~~a~~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~ 257 (617)
|......|...++.|.+.+.+.|.. ..+...+|||||||+|.++..|++. .|+|+|+|+.|+..++
T Consensus 11 F~~~a~~Y~~~Rp~yp~~l~~~l~~------~~~~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~------ 78 (257)
T 4hg2_A 11 FTPVADAYRAFRPRYPRALFRWLGE------VAPARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQAL------ 78 (257)
T ss_dssp ---------CCCCCCCHHHHHHHHH------HSSCSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCC------
T ss_pred HHHHHHHHHHHCCCcHHHHHHHHHH------hcCCCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhh------
Confidence 3333445555555555555554432 1112358999999999999999886 5999999887765543
Q ss_pred hCCCcccccccccccCCCCCccccccccccccccccccceEEEEecccccCCceeeecChhhhcCCH
Q 007128 258 RGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDE 324 (617)
Q Consensus 258 rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~ 324 (617)
+..++.+.+++++.+|+++++||+|+|+.++ ||.+. ..++.|+.|+|||||+|++.........+
T Consensus 79 ~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~-h~~~~-~~~~~e~~rvLkpgG~l~~~~~~~~~~~~ 143 (257)
T 4hg2_A 79 RHPRVTYAVAPAEDTGLPPASVDVAIAAQAM-HWFDL-DRFWAELRRVARPGAVFAAVTYGLTRVDP 143 (257)
T ss_dssp CCTTEEEEECCTTCCCCCSSCEEEEEECSCC-TTCCH-HHHHHHHHHHEEEEEEEEEEEECCCBCCH
T ss_pred hcCCceeehhhhhhhcccCCcccEEEEeeeh-hHhhH-HHHHHHHHHHcCCCCEEEEEECCCCCCCH
Confidence 2346788899999999999999999999885 77654 67999999999999999987654444443
No 2
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.46 E-value=6.4e-15 Score=148.46 Aligned_cols=112 Identities=16% Similarity=0.278 Sum_probs=88.5
Q ss_pred HHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCC-Cccccccccccc
Q 007128 196 ASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRL 272 (617)
Q Consensus 196 ~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~l 272 (617)
+.+.+.+.. . ++.+|||||||+|.++..|++. .|+++|+++.++..++. .+.+.++ ++.+.++|+..+
T Consensus 27 ~~l~~~l~~------~--~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~-~~~~~~~~~v~~~~~d~~~l 97 (260)
T 1vl5_A 27 AKLMQIAAL------K--GNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARA-FIEGNGHQQVEYVQGDAEQM 97 (260)
T ss_dssp HHHHHHHTC------C--SCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHH-HHHHTTCCSEEEEECCC-CC
T ss_pred HHHHHHhCC------C--CCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHH-HHHhcCCCceEEEEecHHhC
Confidence 455566654 2 3368999999999999988876 58999999988877764 3334443 478889999999
Q ss_pred CCCCCccccccccccccccccccceEEEEecccccCCceeeecCh
Q 007128 273 PYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 273 pf~~~sFDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p 317 (617)
|+++++||+|+|..+++|+ .++..+|.++.|+|||||++++..+
T Consensus 98 ~~~~~~fD~V~~~~~l~~~-~d~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 98 PFTDERFHIVTCRIAAHHF-PNPASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp CSCTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEhhhhHhc-CCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 9999999999999886554 5557899999999999999999743
No 3
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.44 E-value=1.6e-14 Score=144.74 Aligned_cols=143 Identities=15% Similarity=0.142 Sum_probs=103.9
Q ss_pred hhHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCC--Cccccc
Q 007128 192 DKYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGI--PAYLGV 266 (617)
Q Consensus 192 ~~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~ 266 (617)
....+.+.+.+.. ..+ .+|||||||+|.++..|++. .|+++|+++.++..++. .+...++ ++.+..
T Consensus 22 ~~~~~~l~~~~~~------~~~--~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~-~~~~~~~~~~v~~~~ 92 (256)
T 1nkv_A 22 EEKYATLGRVLRM------KPG--TRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKR-RAEELGVSERVHFIH 92 (256)
T ss_dssp HHHHHHHHHHTCC------CTT--CEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEE
T ss_pred HHHHHHHHHhcCC------CCC--CEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHH-HHHhcCCCcceEEEE
Confidence 4455666666654 333 68999999999999888764 68999999988887773 4444454 478888
Q ss_pred ccccccCCCCCccccccccccccccccccceEEEEecccccCCceeeecChhhhcCC--HHHHHH-----------HHHH
Q 007128 267 LGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQD--EEDLRI-----------WKEM 333 (617)
Q Consensus 267 ~d~~~lpf~~~sFDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~--~~~~~~-----------w~~l 333 (617)
+|+..+++ +++||+|+|..+++| ..+...+|+++.|+|||||+++++.+...... ...... ..++
T Consensus 93 ~d~~~~~~-~~~fD~V~~~~~~~~-~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (256)
T 1nkv_A 93 NDAAGYVA-NEKCDVAACVGATWI-AGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGL 170 (256)
T ss_dssp SCCTTCCC-SSCEEEEEEESCGGG-TSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHH
T ss_pred CChHhCCc-CCCCCEEEECCChHh-cCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHH
Confidence 99999988 789999999887544 44557899999999999999999765432111 111111 1567
Q ss_pred HHHHHHhhhhhh
Q 007128 334 SALVERMCWRIA 345 (617)
Q Consensus 334 ~~l~~~~gf~~v 345 (617)
.++++++||+.+
T Consensus 171 ~~~l~~aGf~~~ 182 (256)
T 1nkv_A 171 VGAFDDLGYDVV 182 (256)
T ss_dssp HHHHHTTTBCCC
T ss_pred HHHHHHCCCeeE
Confidence 778888888654
No 4
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.44 E-value=1e-14 Score=147.67 Aligned_cols=121 Identities=25% Similarity=0.374 Sum_probs=92.5
Q ss_pred CchhhHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCC--Ccc
Q 007128 189 YGADKYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGI--PAY 263 (617)
Q Consensus 189 ~~a~~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~--~~~ 263 (617)
.......+.+.+.+.. .. +.+|||||||+|.++..+++. .|+++|+++.++..++. .+...++ ++.
T Consensus 44 ~~~~~~~~~l~~~~~~------~~--~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~~~ 114 (273)
T 3bus_A 44 DATDRLTDEMIALLDV------RS--GDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANA-RATAAGLANRVT 114 (273)
T ss_dssp HHHHHHHHHHHHHSCC------CT--TCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHH-HHHHTTCTTTEE
T ss_pred HHHHHHHHHHHHhcCC------CC--CCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-HHHhcCCCcceE
Confidence 3344455556666654 33 368999999999999988764 68999999988777663 3333444 377
Q ss_pred cccccccccCCCCCccccccccccccccccccceEEEEecccccCCceeeecChhh
Q 007128 264 LGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 264 ~~~~d~~~lpf~~~sFDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
+..+|...+|+++++||+|++..++.|+ .+...+|+++.|+|||||+++++++..
T Consensus 115 ~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 115 FSYADAMDLPFEDASFDAVWALESLHHM-PDRGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp EEECCTTSCCSCTTCEEEEEEESCTTTS-SCHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred EEECccccCCCCCCCccEEEEechhhhC-CCHHHHHHHHHHHcCCCeEEEEEEeec
Confidence 8888999999999999999999886554 445789999999999999999986543
No 5
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.42 E-value=2.1e-14 Score=143.90 Aligned_cols=129 Identities=17% Similarity=0.242 Sum_probs=99.1
Q ss_pred eeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCCC--cccccccccccCCCCCcccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGIP--AYLGVLGTKRLPYPSRSFELAHCSRCRI 289 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~~--~~~~~~d~~~lpf~~~sFDlV~~s~~l~ 289 (617)
+.+|||||||+|.++..+++. .|+++|+++.++..++. .+...++. +.+..+|+..+|+++++||+|+|..+++
T Consensus 47 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 125 (257)
T 3f4k_A 47 DAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNE-NAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAIY 125 (257)
T ss_dssp TCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCSC
T ss_pred CCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHH-HHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChHh
Confidence 368999999999999998875 68999999988877763 44444543 7788899999999999999999998866
Q ss_pred ccccccceEEEEecccccCCceeeecChhhhc--CCHHHHHHH----------HHHHHHHHHhhhhhhh
Q 007128 290 DWLQRDGILLLELDRLLRPGGYFAYSSPEAYA--QDEEDLRIW----------KEMSALVERMCWRIAA 346 (617)
Q Consensus 290 h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~--~~~~~~~~w----------~~l~~l~~~~gf~~v~ 346 (617)
|. +...+++++.++|||||+++++++.... ........| .++.++++++||+.+.
T Consensus 126 ~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 192 (257)
T 3f4k_A 126 NI--GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTA 192 (257)
T ss_dssp CC--CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEE
T ss_pred hc--CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEE
Confidence 55 4567999999999999999998754322 122222223 5677888888886543
No 6
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.42 E-value=2.7e-14 Score=144.59 Aligned_cols=128 Identities=18% Similarity=0.225 Sum_probs=99.1
Q ss_pred eeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCCC--cccccccccccCCCCCcccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGIP--AYLGVLGTKRLPYPSRSFELAHCSRCRI 289 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~~--~~~~~~d~~~lpf~~~sFDlV~~s~~l~ 289 (617)
+.+|||||||+|.++..+++. .|+++|+++.++..++. .+...++. +.+..+|+..+|+++++||+|+|..++.
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~ 125 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNR-NARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAIY 125 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCGG
T ss_pred CCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHH-HHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCce
Confidence 468999999999999998875 68999999988877774 33444543 7888999999999999999999998866
Q ss_pred ccccccceEEEEecccccCCceeeecChhhhc--CCHHHHHHH----------HHHHHHHHHhhhhhh
Q 007128 290 DWLQRDGILLLELDRLLRPGGYFAYSSPEAYA--QDEEDLRIW----------KEMSALVERMCWRIA 345 (617)
Q Consensus 290 h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~--~~~~~~~~w----------~~l~~l~~~~gf~~v 345 (617)
|+ +...+++++.++|||||+++++++.... ........| .++.++++++||+.+
T Consensus 126 ~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v 191 (267)
T 3kkz_A 126 NI--GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPV 191 (267)
T ss_dssp GT--CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEE
T ss_pred ec--CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEE
Confidence 55 4577999999999999999998654321 122222233 567888888888665
No 7
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.41 E-value=2.5e-14 Score=138.99 Aligned_cols=129 Identities=10% Similarity=0.139 Sum_probs=97.1
Q ss_pred eEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCC--CcccccccccccCCCCCccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRLPYPSRSFELAHCSRCRID 290 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h 290 (617)
.+|||||||+|.++..|++. .++++|+++.++..++.. +...++ ++.+..+|...+++++++||+|+|..+++|
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 123 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKN-IADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFF 123 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGG
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHH-HHhccccCceEEEEcCHHHCCCCcccccEEEECchHhh
Confidence 38999999999999998875 689999999888777643 333343 477888999999999999999999988655
Q ss_pred cccccceEEEEecccccCCceeeecChhhhcC-------------CH--------HHHHHHHHHHHHHHHhhhhhhh
Q 007128 291 WLQRDGILLLELDRLLRPGGYFAYSSPEAYAQ-------------DE--------EDLRIWKEMSALVERMCWRIAA 346 (617)
Q Consensus 291 ~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~-------------~~--------~~~~~w~~l~~l~~~~gf~~v~ 346 (617)
+ .+...+++++.++|||||+++++.+..... .. .....-+++.++++++||+.+.
T Consensus 124 ~-~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 199 (219)
T 3dlc_A 124 W-EDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYE 199 (219)
T ss_dssp C-SCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEE
T ss_pred c-cCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEE
Confidence 5 555789999999999999999964221100 00 0000117788999999997654
No 8
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.40 E-value=1.6e-14 Score=148.39 Aligned_cols=150 Identities=15% Similarity=0.163 Sum_probs=106.9
Q ss_pred ccCchhhHHHHHHhHh----cCCCCCCCCCCceeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhC
Q 007128 187 FHYGADKYIASIANML----NFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERG 259 (617)
Q Consensus 187 F~~~a~~Y~~~l~~lL----~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg 259 (617)
+........+.+.+.+ .. .. +.+|||||||+|.++..|++. .|+++|+++.++..++.. ....+
T Consensus 59 ~~~~~~~~~~~l~~~l~~~~~~------~~--~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~-~~~~~ 129 (297)
T 2o57_A 59 IREASLRTDEWLASELAMTGVL------QR--QAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEY-NNQAG 129 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCC------CT--TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHH-HHHHT
T ss_pred hHHHHHHHHHHHHHHhhhccCC------CC--CCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHH-HHhcC
Confidence 3334445556666666 43 22 368999999999999998875 589999999888777643 33344
Q ss_pred C--CcccccccccccCCCCCccccccccccccccccccceEEEEecccccCCceeeecChhhhcCCH--HHHHH------
Q 007128 260 I--PAYLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDE--EDLRI------ 329 (617)
Q Consensus 260 ~--~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~--~~~~~------ 329 (617)
+ ++.+..+|+..+|+++++||+|++..+++|+. +...+|+++.|+|||||+++++++....... .....
T Consensus 130 ~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (297)
T 2o57_A 130 LADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSP-DKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKL 208 (297)
T ss_dssp CTTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTC
T ss_pred CCcceEEEEcCcccCCCCCCCEeEEEecchhhhcC-CHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcC
Confidence 4 47788899999999999999999998866654 4578999999999999999998654321110 00111
Q ss_pred -----HHHHHHHHHHhhhhhhh
Q 007128 330 -----WKEMSALVERMCWRIAA 346 (617)
Q Consensus 330 -----w~~l~~l~~~~gf~~v~ 346 (617)
-.++.++++++||+++.
T Consensus 209 ~~~~~~~~~~~~l~~aGf~~~~ 230 (297)
T 2o57_A 209 HDMGSLGLYRSLAKECGLVTLR 230 (297)
T ss_dssp SSCCCHHHHHHHHHHTTEEEEE
T ss_pred CCCCCHHHHHHHHHHCCCeEEE
Confidence 15567778888886543
No 9
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.38 E-value=1.8e-14 Score=144.58 Aligned_cols=130 Identities=15% Similarity=0.182 Sum_probs=93.9
Q ss_pred eeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCcccccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDW 291 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~ 291 (617)
+.+|||||||+|.++..+++. .|+++|+++.++..++...... .++.+..+|...+|+++++||+|++..+++|+
T Consensus 56 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 133 (266)
T 3ujc_A 56 NSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN--NKIIFEANDILTKEFPENNFDLIYSRDAILAL 133 (266)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTCCCCTTCEEEEEEESCGGGS
T ss_pred CCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccCCCCCCcEEEEeHHHHHHhc
Confidence 468999999999999998875 5889988886665554222111 46778888999999999999999999886655
Q ss_pred c-cccceEEEEecccccCCceeeecChhhhc---CCHHHHHH----------HHHHHHHHHHhhhhhhh
Q 007128 292 L-QRDGILLLELDRLLRPGGYFAYSSPEAYA---QDEEDLRI----------WKEMSALVERMCWRIAA 346 (617)
Q Consensus 292 ~-~~~~~~L~el~RvLrPGG~lvis~p~~~~---~~~~~~~~----------w~~l~~l~~~~gf~~v~ 346 (617)
. .+...+++++.|+|||||++++.++.... ........ -+++.++++++||+.+.
T Consensus 134 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 202 (266)
T 3ujc_A 134 SLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVV 202 (266)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred ChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEE
Confidence 2 44467999999999999999998653322 11111100 15677788888886543
No 10
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.38 E-value=3.9e-14 Score=138.60 Aligned_cols=128 Identities=17% Similarity=0.170 Sum_probs=92.9
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhC-CCcccccccccccCCCCCccccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERG-IPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWL 292 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg-~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~ 292 (617)
.+|||||||+|.++..|++. .++++|+++.++..++ ++. .++.+..+|+..++++ ++||+|+|..++.|+
T Consensus 47 ~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~-----~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~- 119 (220)
T 3hnr_A 47 GNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAK-----EKLPKEFSITEGDFLSFEVP-TSIDTIVSTYAFHHL- 119 (220)
T ss_dssp SEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHH-----HHSCTTCCEESCCSSSCCCC-SCCSEEEEESCGGGS-
T ss_pred CeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHH-----HhCCCceEEEeCChhhcCCC-CCeEEEEECcchhcC-
Confidence 58999999999999999875 5888888876655444 332 2577888899999988 899999999886554
Q ss_pred cccce--EEEEecccccCCceeeecChhhhcCCHH-----------------HHH-----HHHHHHHHHHHhhhhhhhcc
Q 007128 293 QRDGI--LLLELDRLLRPGGYFAYSSPEAYAQDEE-----------------DLR-----IWKEMSALVERMCWRIAAKR 348 (617)
Q Consensus 293 ~~~~~--~L~el~RvLrPGG~lvis~p~~~~~~~~-----------------~~~-----~w~~l~~l~~~~gf~~v~~~ 348 (617)
.+... +|+++.|+|||||+++++++........ ... .-+++.++++++||+++...
T Consensus 120 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~ 199 (220)
T 3hnr_A 120 TDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTR 199 (220)
T ss_dssp CHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred ChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEee
Confidence 44444 8999999999999999985432111000 000 01678888999999766554
Q ss_pred Cc
Q 007128 349 NQ 350 (617)
Q Consensus 349 ~~ 350 (617)
..
T Consensus 200 ~~ 201 (220)
T 3hnr_A 200 LN 201 (220)
T ss_dssp CS
T ss_pred cc
Confidence 33
No 11
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.38 E-value=7.5e-14 Score=139.22 Aligned_cols=101 Identities=21% Similarity=0.335 Sum_probs=83.4
Q ss_pred eeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCC-CcccccccccccCCCCCcccccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRLPYPSRSFELAHCSRCRIDW 291 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~ 291 (617)
+.+|||||||+|.++..+++. .|+++|+++.++..++.. +...++ ++.+..+|+..+|+++++||+|+|..+++|+
T Consensus 22 ~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 100 (239)
T 1xxl_A 22 EHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSF-AQEKGVENVRFQQGTAESLPFPDDSFDIITCRYAAHHF 100 (239)
T ss_dssp TCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH-HHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESCGGGC
T ss_pred CCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHH-HHHcCCCCeEEEecccccCCCCCCcEEEEEECCchhhc
Confidence 368999999999999988876 589999999888777643 333443 5788888999999999999999999886655
Q ss_pred ccccceEEEEecccccCCceeeecCh
Q 007128 292 LQRDGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 292 ~~~~~~~L~el~RvLrPGG~lvis~p 317 (617)
.+...++.++.|+|||||++++.++
T Consensus 101 -~~~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 101 -SDVRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp -SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -cCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 4557899999999999999999754
No 12
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.36 E-value=3.4e-14 Score=138.99 Aligned_cols=130 Identities=20% Similarity=0.243 Sum_probs=98.3
Q ss_pred eEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCC-CcccccccccccCCCCCcccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRLPYPSRSFELAHCSRCRI 289 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~lpf~~~sFDlV~~s~~l~ 289 (617)
.+|||+|||+|.++..+++. .|+++|+++.++..++.... ..++ ++.+..+|...+++++++||+|+++.++.
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 117 (219)
T 3dh0_A 39 MTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVN-KLGLKNVEVLKSEENKIPLPDNTVDFIFMAFTFH 117 (219)
T ss_dssp CEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHH-HHTCTTEEEEECBTTBCSSCSSCEEEEEEESCGG
T ss_pred CEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHH-HcCCCcEEEEecccccCCCCCCCeeEEEeehhhh
Confidence 68999999999999888764 48999999988887774443 3343 57888899999999999999999998865
Q ss_pred ccccccceEEEEecccccCCceeeecChhhhcCC----HHHHHHHHHHHHHHHHhhhhhhhc
Q 007128 290 DWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQD----EEDLRIWKEMSALVERMCWRIAAK 347 (617)
Q Consensus 290 h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~----~~~~~~w~~l~~l~~~~gf~~v~~ 347 (617)
|+ .+...+++++.++|||||+++++.+...... ......-+++.+++++.||+.+..
T Consensus 118 ~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 178 (219)
T 3dh0_A 118 EL-SEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRV 178 (219)
T ss_dssp GC-SSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEE
T ss_pred hc-CCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEE
Confidence 55 4557899999999999999999753322110 000001267889999999986653
No 13
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.35 E-value=4.9e-14 Score=143.55 Aligned_cols=100 Identities=15% Similarity=0.210 Sum_probs=78.4
Q ss_pred eeEEEeecccccccccccccc------hhhhhccCCCccchhhhHHHHHh-CCCcccccccccccCCCCCcccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS------DVITMSLAPNDVHQNQIQFALER-GIPAYLGVLGTKRLPYPSRSFELAHCSRC 287 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~------~V~gvDis~~dl~~a~~~~a~~r-g~~~~~~~~d~~~lpf~~~sFDlV~~s~~ 287 (617)
+.+|||||||+|.++..|+++ .|+|+|+|+.|++.|+.+..... ..++.+.++|+..+|++ .||+|+++.+
T Consensus 71 ~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~~~~ 148 (261)
T 4gek_A 71 GTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVLNFT 148 (261)
T ss_dssp TCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEEESC
T ss_pred CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccccceeeee
Confidence 368999999999998888753 58999999999988875443322 23578888999988875 5999999887
Q ss_pred cccccccc--ceEEEEecccccCCceeeecCh
Q 007128 288 RIDWLQRD--GILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 288 l~h~~~~~--~~~L~el~RvLrPGG~lvis~p 317 (617)
++ +..+. ..+|++++|+|||||+|+++.+
T Consensus 149 l~-~~~~~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 149 LQ-FLEPSERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp GG-GSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ee-ecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence 54 44332 3589999999999999999743
No 14
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.35 E-value=2.7e-14 Score=143.19 Aligned_cols=99 Identities=15% Similarity=0.208 Sum_probs=80.3
Q ss_pred eeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCcccccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDW 291 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~ 291 (617)
+.+|||||||+|.++..+++. .|+++|+++.++..++.... ..++.+..+|+..+|+++++||+|+|..++.|
T Consensus 45 ~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~- 120 (253)
T 3g5l_A 45 QKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIAIEPDAYNVVLSSLALHY- 120 (253)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCCCCTTCEEEEEEESCGGG-
T ss_pred CCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCCCCCCCeEEEEEchhhhh-
Confidence 468999999999999998875 58899988876655542221 34678888999999999999999999987554
Q ss_pred ccccceEEEEecccccCCceeeecCh
Q 007128 292 LQRDGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 292 ~~~~~~~L~el~RvLrPGG~lvis~p 317 (617)
..+...+|+++.++|||||+++++.+
T Consensus 121 ~~~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 121 IASFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhHHHHHHHHHHHcCCCcEEEEEeC
Confidence 45567899999999999999999743
No 15
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.35 E-value=2e-14 Score=142.31 Aligned_cols=125 Identities=14% Similarity=0.125 Sum_probs=91.9
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCC-CcccccccccccCCCCCccccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRLPYPSRSFELAHCSRCRIDWL 292 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~ 292 (617)
.+|||||||+|.++..|++. .|+|+|+++.++..++ ++.. ++.+.++|+..+ +++++||+|+|..+++|+
T Consensus 44 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~-----~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~- 116 (250)
T 2p7i_A 44 GNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQ-----GRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHI- 116 (250)
T ss_dssp SCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHH-----HHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGC-
T ss_pred CcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHH-----HhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhh-
Confidence 57999999999999999876 5889988886665544 3322 577788888877 467899999999886554
Q ss_pred cccceEEEEec-ccccCCceeeecChhhhcCCH-----------------HH-H------HHHHHHHHHHHHhhhhhhhc
Q 007128 293 QRDGILLLELD-RLLRPGGYFAYSSPEAYAQDE-----------------ED-L------RIWKEMSALVERMCWRIAAK 347 (617)
Q Consensus 293 ~~~~~~L~el~-RvLrPGG~lvis~p~~~~~~~-----------------~~-~------~~w~~l~~l~~~~gf~~v~~ 347 (617)
.++..+|+++. |+|||||+++++++....... .. . ..-+++.++++++||+++..
T Consensus 117 ~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 196 (250)
T 2p7i_A 117 DDPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYR 196 (250)
T ss_dssp SSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEE
Confidence 45578999999 999999999998755421100 00 0 00167888888889876654
No 16
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.35 E-value=4.4e-15 Score=148.47 Aligned_cols=131 Identities=14% Similarity=0.144 Sum_probs=95.2
Q ss_pred eeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCcccccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDW 291 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~ 291 (617)
..+|||||||+|.++..|++. .|+++|+++.++..++.+.... .++.+..+|+..+++++++||+|+|..++.|+
T Consensus 94 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 171 (254)
T 1xtp_A 94 TSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM--PVGKFILASMETATLPPNTYDLIVIQWTAIYL 171 (254)
T ss_dssp CSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGGGCCCCSSCEEEEEEESCGGGS
T ss_pred CCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHHHCCCCCCCeEEEEEcchhhhC
Confidence 468999999999999988875 4889999887776655322211 35778888999999988999999999986665
Q ss_pred c-cccceEEEEecccccCCceeeecChhhhcC-------CHHHHHHHHHHHHHHHHhhhhhhhc
Q 007128 292 L-QRDGILLLELDRLLRPGGYFAYSSPEAYAQ-------DEEDLRIWKEMSALVERMCWRIAAK 347 (617)
Q Consensus 292 ~-~~~~~~L~el~RvLrPGG~lvis~p~~~~~-------~~~~~~~w~~l~~l~~~~gf~~v~~ 347 (617)
. .+...+|+++.++|||||+++++++..... .......-+++.++++++||+++..
T Consensus 172 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 235 (254)
T 1xtp_A 172 TDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKE 235 (254)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEe
Confidence 3 234679999999999999999986422110 0000001167889999999976643
No 17
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.35 E-value=4.6e-14 Score=146.60 Aligned_cols=130 Identities=15% Similarity=0.067 Sum_probs=98.9
Q ss_pred eeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCC--CcccccccccccCCCCCcccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRLPYPSRSFELAHCSRCRI 289 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~lpf~~~sFDlV~~s~~l~ 289 (617)
+.+|||||||+|.++..|+++ .|+++|+++.++..++. .+...++ ++.+..+|+..+|+++++||+|++..++.
T Consensus 118 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 196 (312)
T 3vc1_A 118 DDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNR-RARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNESTM 196 (312)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCGG
T ss_pred CCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-HHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCchh
Confidence 468999999999999998875 58999999988877773 4444554 37888999999999999999999998865
Q ss_pred ccccccceEEEEecccccCCceeeecChhhhcCC---HHHHH----H-------HHHHHHHHHHhhhhhhhc
Q 007128 290 DWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQD---EEDLR----I-------WKEMSALVERMCWRIAAK 347 (617)
Q Consensus 290 h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~---~~~~~----~-------w~~l~~l~~~~gf~~v~~ 347 (617)
|+ + ...+|+++.|+|||||++++.++...... ..... . -+++.++++++||+++..
T Consensus 197 ~~-~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~ 266 (312)
T 3vc1_A 197 YV-D-LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTI 266 (312)
T ss_dssp GS-C-HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEE
T ss_pred hC-C-HHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEE
Confidence 55 3 57899999999999999999764433211 11000 1 166788888888876543
No 18
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.34 E-value=7.5e-14 Score=141.71 Aligned_cols=101 Identities=21% Similarity=0.358 Sum_probs=82.9
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC-CcccccccccccCCCCCcccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRLPYPSRSFELAHCSRCRI 289 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~lpf~~~sFDlV~~s~~l~ 289 (617)
+.+|||||||+|.++..+++. .|+++|+++.++..++... ...++ ++.+...|...+++++++||+|++..++.
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 116 (276)
T 3mgg_A 38 GAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENT-EKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVLE 116 (276)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHH-HHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCGG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEcccccCCCCCCCeeEEEEechhh
Confidence 468999999999999888765 5899999998887776433 33343 57888889999999999999999998855
Q ss_pred ccccccceEEEEecccccCCceeeecCh
Q 007128 290 DWLQRDGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 290 h~~~~~~~~L~el~RvLrPGG~lvis~p 317 (617)
| ..++..+++++.++|||||++++..+
T Consensus 117 ~-~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 117 H-LQSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp G-CSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred h-cCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 5 45556899999999999999999754
No 19
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.34 E-value=6.8e-14 Score=141.53 Aligned_cols=137 Identities=14% Similarity=0.094 Sum_probs=99.6
Q ss_pred hHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCccccccccc
Q 007128 193 KYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTK 270 (617)
Q Consensus 193 ~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~ 270 (617)
.+.+.+.+.+.. .. +.+|||||||+|.++..|++. .|+|+|+++.++..++ ++. ++.+.+.|+.
T Consensus 21 ~~~~~l~~~~~~------~~--~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~-----~~~-~~~~~~~d~~ 86 (261)
T 3ege_A 21 RIVNAIINLLNL------PK--GSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAV-----VHP-QVEWFTGYAE 86 (261)
T ss_dssp HHHHHHHHHHCC------CT--TCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSC-----CCT-TEEEECCCTT
T ss_pred HHHHHHHHHhCC------CC--CCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHH-----hcc-CCEEEECchh
Confidence 455666666654 22 368999999999999999875 5899999886665443 222 6788889999
Q ss_pred ccCCCCCccccccccccccccccccceEEEEecccccCCceeeecChhhhc--------CCHHHHHH-------HHHHHH
Q 007128 271 RLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYA--------QDEEDLRI-------WKEMSA 335 (617)
Q Consensus 271 ~lpf~~~sFDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~--------~~~~~~~~-------w~~l~~ 335 (617)
.+|+++++||+|+|..+++|+ .+...+++++.|+|| ||++++.++.... ..+..... -+.+.
T Consensus 87 ~~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 163 (261)
T 3ege_A 87 NLALPDKSVDGVISILAIHHF-SHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN- 163 (261)
T ss_dssp SCCSCTTCBSEEEEESCGGGC-SSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-
T ss_pred hCCCCCCCEeEEEEcchHhhc-cCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-
Confidence 999999999999999886555 555789999999999 9988886544221 11111111 15577
Q ss_pred HHHHhhhhhhh
Q 007128 336 LVERMCWRIAA 346 (617)
Q Consensus 336 l~~~~gf~~v~ 346 (617)
+++++||+.+.
T Consensus 164 ~l~~aGF~~v~ 174 (261)
T 3ege_A 164 LLQENTKRRVE 174 (261)
T ss_dssp HHHHHHCSEEE
T ss_pred HHHHcCCCcee
Confidence 89999996654
No 20
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.32 E-value=5.3e-14 Score=140.17 Aligned_cols=122 Identities=16% Similarity=0.182 Sum_probs=88.9
Q ss_pred eeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCccccccccccc--CCCCCccccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRL--PYPSRSFELAHCSRCRID 290 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~l--pf~~~sFDlV~~s~~l~h 290 (617)
+.+|||||||+|.++..|++. .|+++|+++.++. .++++ +.+..+|...+ |+++++||+|+|..++.|
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~-----~a~~~---~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~ 113 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIK-----FCEGK---FNVVKSDAIEYLKSLPDKYLDGVMISHFVEH 113 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHH-----HHHTT---SEEECSCHHHHHHTSCTTCBSEEEEESCGGG
T ss_pred CCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHH-----HHHhh---cceeeccHHHHhhhcCCCCeeEEEECCchhh
Confidence 368999999999999988876 5788888775544 44433 55667777665 888899999999988655
Q ss_pred ccc-ccceEEEEecccccCCceeeecChhhhcCCHHHHHH-----------HHHHHHHHHHhhhhhh
Q 007128 291 WLQ-RDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRI-----------WKEMSALVERMCWRIA 345 (617)
Q Consensus 291 ~~~-~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~-----------w~~l~~l~~~~gf~~v 345 (617)
+.. +...+++++.|+|||||++++..+........ ... -+++.+++++.||+++
T Consensus 114 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~ 179 (240)
T 3dli_A 114 LDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSL-INFYIDPTHKKPVHPETLKFILEYLGFRDV 179 (240)
T ss_dssp SCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHH-HHHTTSTTCCSCCCHHHHHHHHHHHTCEEE
T ss_pred CCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHH-HHHhcCccccccCCHHHHHHHHHHCCCeEE
Confidence 542 22579999999999999999986654221110 000 1678889999999754
No 21
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.32 E-value=6e-14 Score=144.39 Aligned_cols=103 Identities=9% Similarity=0.062 Sum_probs=74.3
Q ss_pred CceeEEEeeccccccccccc----ccc--hh----hhhccCCCccchhhhHHHHHhCC---CcccccccccccC------
Q 007128 213 GRLRTVLDVGCGVASFGAYL----LSS--DV----ITMSLAPNDVHQNQIQFALERGI---PAYLGVLGTKRLP------ 273 (617)
Q Consensus 213 ~~~~~VLDVGCG~G~~~~~L----~~~--~V----~gvDis~~dl~~a~~~~a~~rg~---~~~~~~~d~~~lp------ 273 (617)
.+..+|||||||+|.++..+ +.+ ++ +++|+|+.|+..++.+.+...++ ...+..++.+.++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 44579999999999765433 221 22 89999999988877544432233 2334455555443
Q ss_pred CCCCccccccccccccccccccceEEEEecccccCCceeeecC
Q 007128 274 YPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 274 f~~~sFDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~ 316 (617)
+++++||+|+|+.++ ||.+++..+|++++|+|||||++++..
T Consensus 131 ~~~~~fD~V~~~~~l-~~~~d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 131 KELQKWDFIHMIQML-YYVKDIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp TCCCCEEEEEEESCG-GGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCceeEEEEeeee-eecCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 678899999999985 555666789999999999999999864
No 22
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.31 E-value=1.4e-13 Score=136.40 Aligned_cols=117 Identities=17% Similarity=0.261 Sum_probs=88.9
Q ss_pred hHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCccccccccc
Q 007128 193 KYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTK 270 (617)
Q Consensus 193 ~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~ 270 (617)
.+.+.+.+++.. ...+..+|||||||+|.++..+++. .++++|+++.++..++.. ....+.++.+..+|+.
T Consensus 22 ~~~~~~~~~l~~------~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~-~~~~~~~~~~~~~d~~ 94 (246)
T 1y8c_A 22 KWSDFIIEKCVE------NNLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENK-FRSQGLKPRLACQDIS 94 (246)
T ss_dssp HHHHHHHHHHHT------TTCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHH-HHHTTCCCEEECCCGG
T ss_pred HHHHHHHHHHHH------hCCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHH-HhhcCCCeEEEecccc
Confidence 344555666654 2123368999999999999998876 589999999888777643 3334457788888998
Q ss_pred ccCCCCCccccccccc-cccccc--cccceEEEEecccccCCceeeecCh
Q 007128 271 RLPYPSRSFELAHCSR-CRIDWL--QRDGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 271 ~lpf~~~sFDlV~~s~-~l~h~~--~~~~~~L~el~RvLrPGG~lvis~p 317 (617)
.++++ ++||+|+|.. ++.|+. .+...+|+++.++|+|||+++++.+
T Consensus 95 ~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 95 NLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp GCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 88887 8999999987 765552 3446799999999999999998643
No 23
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.31 E-value=6.9e-14 Score=142.93 Aligned_cols=102 Identities=18% Similarity=0.155 Sum_probs=82.3
Q ss_pred eeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCC--CcccccccccccC-CCCCcccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRLP-YPSRSFELAHCSRCRI 289 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~lp-f~~~sFDlV~~s~~l~ 289 (617)
+.+|||||||+|.++..|++. .|+++|+++.++..++.. +...++ ++.+..+|...++ +++++||+|+|..++.
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~ 147 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQA-AEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLE 147 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGG
T ss_pred CCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHH-HHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchhh
Confidence 368999999999999999876 589999999888777633 333343 4678888988887 7789999999998855
Q ss_pred ccccccceEEEEecccccCCceeeecChh
Q 007128 290 DWLQRDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 290 h~~~~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
|+ .++..+|+++.++|||||++++..+.
T Consensus 148 ~~-~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 148 WV-ADPRSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp GC-SCHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred cc-cCHHHHHHHHHHHcCCCeEEEEEEeC
Confidence 54 55578999999999999999997643
No 24
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.31 E-value=2.5e-13 Score=135.94 Aligned_cols=144 Identities=14% Similarity=0.140 Sum_probs=97.3
Q ss_pred hhHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCCCccccccc
Q 007128 192 DKYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGIPAYLGVLG 268 (617)
Q Consensus 192 ~~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d 268 (617)
..|.+.+.+.+.. . +.+|||||||+|..+..+++. .++++|+++.++..++ +.+...+.++.+..++
T Consensus 47 ~~~m~~~a~~~~~------~---G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~-~~~~~~~~~~~~~~~~ 116 (236)
T 3orh_A 47 TPYMHALAAAASS------K---GGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLR-DWAPRQTHKVIPLKGL 116 (236)
T ss_dssp HHHHHHHHHHHTT------T---CEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHH-HHGGGCSSEEEEEESC
T ss_pred HHHHHHHHHhhcc------C---CCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHH-HHHhhCCCceEEEeeh
Confidence 4566666666653 2 368999999999999988775 5899999998887776 4455556667777677
Q ss_pred cccc--CCCCCccccccc-----cccccccccccceEEEEecccccCCceeeecChhhh------cCCHHHHHHH-HHHH
Q 007128 269 TKRL--PYPSRSFELAHC-----SRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAY------AQDEEDLRIW-KEMS 334 (617)
Q Consensus 269 ~~~l--pf~~~sFDlV~~-----s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~~~------~~~~~~~~~w-~~l~ 334 (617)
+..+ ++++++||.|++ .....| ..+...++.++.|+|||||+|++...... .+.. ....+ +...
T Consensus 117 a~~~~~~~~~~~FD~i~~D~~~~~~~~~~-~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~-~~~~~~~~~~ 194 (236)
T 3orh_A 117 WEDVAPTLPDGHFDGILYDTYPLSEETWH-THQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSD-ITIMFEETQV 194 (236)
T ss_dssp HHHHGGGSCTTCEEEEEECCCCCBGGGTT-THHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSC-HHHHHHHHTH
T ss_pred HHhhcccccccCCceEEEeeeecccchhh-hcchhhhhhhhhheeCCCCEEEEEecCCchhhhhhhhhh-hhhhhHHHHH
Confidence 6543 578889998863 333333 33346799999999999999998542221 0111 11122 4456
Q ss_pred HHHHHhhhhhhhc
Q 007128 335 ALVERMCWRIAAK 347 (617)
Q Consensus 335 ~l~~~~gf~~v~~ 347 (617)
..+.+.||+....
T Consensus 195 ~~L~eaGF~~~~i 207 (236)
T 3orh_A 195 PALLEAGFRRENI 207 (236)
T ss_dssp HHHHHHTCCGGGE
T ss_pred HHHHHcCCeEEEE
Confidence 6677889976543
No 25
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.31 E-value=5.1e-14 Score=139.65 Aligned_cols=128 Identities=19% Similarity=0.188 Sum_probs=95.0
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCcccccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 293 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~~ 293 (617)
.+|||||||+|.++..+++. .|+++|+++.++..++... ...++.+..+|+..+++++++||+|+|..+++|+ .
T Consensus 55 ~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~ 130 (242)
T 3l8d_A 55 AEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERG---EGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWT-E 130 (242)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTT---CBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSS-S
T ss_pred CeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhc---ccCCceEEEcchhcCCCCCCCccEEEEcChHhhc-c
Confidence 58999999999999999876 5888888876655444221 2345778888999999999999999999886555 5
Q ss_pred ccceEEEEecccccCCceeeecChhhhcCCH--HHHH-----------HHHHHHHHHHHhhhhhhhc
Q 007128 294 RDGILLLELDRLLRPGGYFAYSSPEAYAQDE--EDLR-----------IWKEMSALVERMCWRIAAK 347 (617)
Q Consensus 294 ~~~~~L~el~RvLrPGG~lvis~p~~~~~~~--~~~~-----------~w~~l~~l~~~~gf~~v~~ 347 (617)
+...+++++.++|+|||+++++.+....... .... .-.++.++++++||+++..
T Consensus 131 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 197 (242)
T 3l8d_A 131 EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDG 197 (242)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEe
Confidence 5568999999999999999997533211100 0000 0157889999999987653
No 26
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.30 E-value=1.6e-13 Score=140.72 Aligned_cols=101 Identities=12% Similarity=0.205 Sum_probs=82.4
Q ss_pred eeEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCcccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRI 289 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~ 289 (617)
..+|||||||+|.++..|++. .|+++|+++.++..++. .+...+.++.+.+.|+..++++ ++||+|+|..++.
T Consensus 23 ~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~l~ 100 (284)
T 3gu3_A 23 PVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARE-LFRLLPYDSEFLEGDATEIELN-DKYDIAICHAFLL 100 (284)
T ss_dssp CCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHH-HHHSSSSEEEEEESCTTTCCCS-SCEEEEEEESCGG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHhcCCceEEEEcchhhcCcC-CCeeEEEECChhh
Confidence 468999999999999888764 58999999988777663 3333445788889999999885 6999999998755
Q ss_pred ccccccceEEEEecccccCCceeeecChh
Q 007128 290 DWLQRDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 290 h~~~~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
| ..+...+++++.++|||||++++..+.
T Consensus 101 ~-~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 101 H-MTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp G-CSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred c-CCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 4 455578999999999999999988765
No 27
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.30 E-value=6.6e-14 Score=139.54 Aligned_cols=133 Identities=15% Similarity=0.120 Sum_probs=96.7
Q ss_pred eeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCcccccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDW 291 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~ 291 (617)
..+|||||||+|.++..|++. .|+++|+++.++..++.........++.+..+|+..+++++++||+|+|..++.|+
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 159 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHL 159 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGGS
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhhC
Confidence 469999999999999988765 58999999988777764333322334677888888899888899999999886555
Q ss_pred ccc-cceEEEEecccccCCceeeecChhhhc------CCHHHHHHHHHHHHHHHHhhhhhhhc
Q 007128 292 LQR-DGILLLELDRLLRPGGYFAYSSPEAYA------QDEEDLRIWKEMSALVERMCWRIAAK 347 (617)
Q Consensus 292 ~~~-~~~~L~el~RvLrPGG~lvis~p~~~~------~~~~~~~~w~~l~~l~~~~gf~~v~~ 347 (617)
.++ ...+|+++.++|||||+++++++.... ........-+++.++++++||+++..
T Consensus 160 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 160 TDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAE 222 (241)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEe
Confidence 432 236899999999999999997643221 00000001267888999999976653
No 28
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.29 E-value=1.1e-13 Score=136.88 Aligned_cols=100 Identities=11% Similarity=0.192 Sum_probs=78.9
Q ss_pred ceeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCcccccccccccc
Q 007128 214 RLRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRI 289 (617)
Q Consensus 214 ~~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~ 289 (617)
+..+|||||||+|.++..+++. .++++|+++.++..++.+. ...+ ++.+..+|+..++++ ++||+|+|..++.
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~-~~~~~~~d~~~~~~~-~~fD~v~~~~~l~ 120 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRF-RGNL-KVKYIEADYSKYDFE-EKYDMVVSALSIH 120 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHT-CSCT-TEEEEESCTTTCCCC-SCEEEEEEESCGG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhh-ccCC-CEEEEeCchhccCCC-CCceEEEEeCccc
Confidence 3479999999999999988875 5889999887776655322 2222 677888999999888 8999999998866
Q ss_pred ccccccc--eEEEEecccccCCceeeecCh
Q 007128 290 DWLQRDG--ILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 290 h~~~~~~--~~L~el~RvLrPGG~lvis~p 317 (617)
|+ .+.. .+++++.|+|||||+++++++
T Consensus 121 ~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 121 HL-EDEDKKELYKRSYSILKESGIFINADL 149 (234)
T ss_dssp GS-CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cC-CHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 55 4333 489999999999999999753
No 29
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.29 E-value=2.9e-13 Score=137.33 Aligned_cols=134 Identities=13% Similarity=0.061 Sum_probs=88.9
Q ss_pred CceeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHh-CC----------------------------
Q 007128 213 GRLRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALER-GI---------------------------- 260 (617)
Q Consensus 213 ~~~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~r-g~---------------------------- 260 (617)
.++.+|||||||+|.++..++.. .|+|+|+|+.++..++.....+. ..
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 34579999999999887776654 49999999999887763321110 00
Q ss_pred Ccc-cccccccc-cCCC---CCccccccccccccccc---cccceEEEEecccccCCceeeecChhh---hcCCH----H
Q 007128 261 PAY-LGVLGTKR-LPYP---SRSFELAHCSRCRIDWL---QRDGILLLELDRLLRPGGYFAYSSPEA---YAQDE----E 325 (617)
Q Consensus 261 ~~~-~~~~d~~~-lpf~---~~sFDlV~~s~~l~h~~---~~~~~~L~el~RvLrPGG~lvis~p~~---~~~~~----~ 325 (617)
.+. +.++|+.. .|++ .++||+|+|+.+++|.. ++...+++++.|+|||||+|++++... +.... .
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~ 213 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSC 213 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEEC
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeec
Confidence 111 55667666 3443 57999999999866543 333569999999999999999985221 10000 0
Q ss_pred HHHHHHHHHHHHHHhhhhhhh
Q 007128 326 DLRIWKEMSALVERMCWRIAA 346 (617)
Q Consensus 326 ~~~~w~~l~~l~~~~gf~~v~ 346 (617)
..-.-+++.++++++||+++.
T Consensus 214 ~~~~~~~l~~~l~~aGF~i~~ 234 (263)
T 2a14_A 214 VALEKGEVEQAVLDAGFDIEQ 234 (263)
T ss_dssp CCCCHHHHHHHHHHTTEEEEE
T ss_pred cccCHHHHHHHHHHCCCEEEE
Confidence 000015788999999997654
No 30
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.29 E-value=2.4e-13 Score=131.44 Aligned_cols=128 Identities=15% Similarity=0.082 Sum_probs=96.2
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccccccccccc-
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWL- 292 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~- 292 (617)
.+|||||||+|.++..|++. .|+++|+++.++ +.++++..++.+..+|+..+++++++||+|+|..+++|+.
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~-----~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 117 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASLGHQIEGLEPATRLV-----ELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGP 117 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHH-----HHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCT
T ss_pred CeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHH-----HHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCH
Confidence 58999999999999999876 588888877554 4444555578888899999999999999999998876654
Q ss_pred cccceEEEEecccccCCceeeecChhhhcCCH-------HHHHHHHHHHHHHHHhhhhhhhcc
Q 007128 293 QRDGILLLELDRLLRPGGYFAYSSPEAYAQDE-------EDLRIWKEMSALVERMCWRIAAKR 348 (617)
Q Consensus 293 ~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~-------~~~~~w~~l~~l~~~~gf~~v~~~ 348 (617)
.+...+|+++.++|||||+++++.+....... ......+++.+++++.||+++...
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 180 (203)
T 3h2b_A 118 GELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSH 180 (203)
T ss_dssp TTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEE
Confidence 24467999999999999999997644321000 000002678899999999876543
No 31
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.29 E-value=1.2e-13 Score=135.85 Aligned_cols=102 Identities=22% Similarity=0.343 Sum_probs=80.6
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCC------CcccccccccccCCCCCcccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGI------PAYLGVLGTKRLPYPSRSFELAHCSRC 287 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~------~~~~~~~d~~~lpf~~~sFDlV~~s~~ 287 (617)
.+|||+|||+|.++..+++. .|+++|+++.++..++. .+...++ ++.+...|...+++++++||+|++..+
T Consensus 32 ~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 110 (235)
T 3sm3_A 32 DEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAET-AARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQAF 110 (235)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-HTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEESC
T ss_pred CeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHH-HHHhcCCccccCcceEEEEecccccCCCCCceeEEEEcch
Confidence 58999999999999998876 58899998877766652 3333333 457778899999998999999999988
Q ss_pred ccccccccc---eEEEEecccccCCceeeecChhh
Q 007128 288 RIDWLQRDG---ILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 288 l~h~~~~~~---~~L~el~RvLrPGG~lvis~p~~ 319 (617)
+.|+. ++. .+++++.++|||||+++++++..
T Consensus 111 l~~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 111 LTSVP-DPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp GGGCC-CHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred hhcCC-CHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 65543 334 69999999999999999986543
No 32
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.29 E-value=7.9e-14 Score=136.15 Aligned_cols=99 Identities=12% Similarity=-0.027 Sum_probs=77.3
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHH------------hCCCcccccccccccCCCC-Cccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALE------------RGIPAYLGVLGTKRLPYPS-RSFE 280 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~------------rg~~~~~~~~d~~~lpf~~-~sFD 280 (617)
.+|||+|||+|..+..|+++ .|+|+|+|+.+++.++.+.... ...++.+.++|+..+++++ ++||
T Consensus 24 ~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~~fD 103 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIGHCA 103 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHHSEE
T ss_pred CEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCCCEE
Confidence 68999999999999999876 5999999999888776432210 1346788899999999875 8999
Q ss_pred cccccccccccccc-cceEEEEecccccCCceeee
Q 007128 281 LAHCSRCRIDWLQR-DGILLLELDRLLRPGGYFAY 314 (617)
Q Consensus 281 lV~~s~~l~h~~~~-~~~~L~el~RvLrPGG~lvi 314 (617)
+|++..+++|+..+ ...+++++.|+|||||++++
T Consensus 104 ~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l 138 (203)
T 1pjz_A 104 AFYDRAAMIALPADMRERYVQHLEALMPQACSGLL 138 (203)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEE
T ss_pred EEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 99987775554322 23589999999999998444
No 33
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.29 E-value=3.5e-13 Score=139.05 Aligned_cols=99 Identities=15% Similarity=0.172 Sum_probs=78.0
Q ss_pred eeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCC--CcccccccccccCCCCCcccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRLPYPSRSFELAHCSRCRI 289 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~lpf~~~sFDlV~~s~~l~ 289 (617)
+.+|||||||+|.++..+++. .|+++|+++.++..++. .+...++ ++.+..+|...+ +++||+|++..+++
T Consensus 73 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~~~~ 148 (302)
T 3hem_A 73 GMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKA-MFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLGAFE 148 (302)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHH-HHHHSCCSSCEEEEECCGGGC---CCCCSEEEEESCGG
T ss_pred cCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHHhcCCCCceEEEECCHHHc---CCCccEEEEcchHH
Confidence 368999999999999999876 58999999988877764 3344454 367778888766 68999999998866
Q ss_pred ccccc--------cceEEEEecccccCCceeeecCh
Q 007128 290 DWLQR--------DGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 290 h~~~~--------~~~~L~el~RvLrPGG~lvis~p 317 (617)
|+.++ ...+++++.++|||||++++.++
T Consensus 149 ~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 149 HFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp GTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred hcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 55332 14689999999999999999754
No 34
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.29 E-value=4.3e-13 Score=133.48 Aligned_cols=144 Identities=13% Similarity=0.118 Sum_probs=97.4
Q ss_pred hhhHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCCCcccccc
Q 007128 191 ADKYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGIPAYLGVL 267 (617)
Q Consensus 191 a~~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~ 267 (617)
...+.+.+.+.+.. +..+|||||||+|.++..|++. .|+++|+++.++..++. .+...+.++.+..+
T Consensus 46 ~~~~~~~l~~~~~~---------~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~-~~~~~~~~v~~~~~ 115 (236)
T 1zx0_A 46 ETPYMHALAAAASS---------KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRD-WAPRQTHKVIPLKG 115 (236)
T ss_dssp GHHHHHHHHHHHTT---------TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHH-HGGGCSSEEEEEES
T ss_pred HHHHHHHHHhhcCC---------CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHH-HHHhcCCCeEEEec
Confidence 34555556555432 2368999999999999988764 58999999988877774 34444566788888
Q ss_pred ccccc--CCCCCccccccc-ccccccccc----ccceEEEEecccccCCceeeecChhhhc-----CCHHHHHHH-HHHH
Q 007128 268 GTKRL--PYPSRSFELAHC-SRCRIDWLQ----RDGILLLELDRLLRPGGYFAYSSPEAYA-----QDEEDLRIW-KEMS 334 (617)
Q Consensus 268 d~~~l--pf~~~sFDlV~~-s~~l~h~~~----~~~~~L~el~RvLrPGG~lvis~p~~~~-----~~~~~~~~w-~~l~ 334 (617)
|...+ |+++++||+|++ .+.+ +... ....+++++.|+|||||+|++....... ........| +...
T Consensus 116 d~~~~~~~~~~~~fD~V~~d~~~~-~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (236)
T 1zx0_A 116 LWEDVAPTLPDGHFDGILYDTYPL-SEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQV 194 (236)
T ss_dssp CHHHHGGGSCTTCEEEEEECCCCC-BGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTH
T ss_pred CHHHhhcccCCCceEEEEECCccc-chhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhhhhhhccHHHH
Confidence 98888 899999999998 4442 2111 1124699999999999999987644320 000111112 3345
Q ss_pred HHHHHhhhhhh
Q 007128 335 ALVERMCWRIA 345 (617)
Q Consensus 335 ~l~~~~gf~~v 345 (617)
..+.+.||...
T Consensus 195 ~~l~~aGF~~~ 205 (236)
T 1zx0_A 195 PALLEAGFRRE 205 (236)
T ss_dssp HHHHHTTCCGG
T ss_pred HHHHHCCCCCC
Confidence 56778888653
No 35
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.28 E-value=2.8e-13 Score=138.39 Aligned_cols=100 Identities=17% Similarity=0.184 Sum_probs=77.9
Q ss_pred eeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCC--CcccccccccccCCCCCcccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRLPYPSRSFELAHCSRCRI 289 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~lpf~~~sFDlV~~s~~l~ 289 (617)
+.+|||||||+|.++..+++. .|+++|+++.++..++.+. .+.++ ++.+..+|...+| ++||+|+|..++.
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~-~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l~ 140 (287)
T 1kpg_A 65 GMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLV-ANSENLRSKRVLLAGWEQFD---EPVDRIVSIGAFE 140 (287)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH-HTCCCCSCEEEEESCGGGCC---CCCSEEEEESCGG
T ss_pred cCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHH-HhcCCCCCeEEEECChhhCC---CCeeEEEEeCchh
Confidence 368999999999999988843 5899999988777666333 33333 4677778887766 7899999998876
Q ss_pred ccc-cccceEEEEecccccCCceeeecChh
Q 007128 290 DWL-QRDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 290 h~~-~~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
|+. .+...+++++.|+|||||++++.++.
T Consensus 141 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 170 (287)
T 1kpg_A 141 HFGHERYDAFFSLAHRLLPADGVMLLHTIT 170 (287)
T ss_dssp GTCTTTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred hcChHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 664 34467999999999999999997644
No 36
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.28 E-value=4.7e-13 Score=131.08 Aligned_cols=98 Identities=12% Similarity=0.157 Sum_probs=77.7
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC------CcccccccccccCCCCCcccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI------PAYLGVLGTKRLPYPSRSFELAHCS 285 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~------~~~~~~~d~~~lpf~~~sFDlV~~s 285 (617)
.+|||||||+|.++..|++. .|+++|+++.++..++.+... .++ ++.+..+|+..+++++++||+|+|.
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~ 109 (219)
T 3jwg_A 31 KKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKI-DRLPEMQRKRISLFQSSLVYRDKRFSGYDAATVI 109 (219)
T ss_dssp CEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTG-GGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEEE
T ss_pred CEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHh-hccccccCcceEEEeCcccccccccCCCCEEEEH
Confidence 58999999999999998864 589999999888777644332 222 5678888888888888899999999
Q ss_pred cccccccccc--ceEEEEecccccCCceeeec
Q 007128 286 RCRIDWLQRD--GILLLELDRLLRPGGYFAYS 315 (617)
Q Consensus 286 ~~l~h~~~~~--~~~L~el~RvLrPGG~lvis 315 (617)
.++.|+ .++ ..+++++.++|||||+++.+
T Consensus 110 ~~l~~~-~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 110 EVIEHL-DENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp SCGGGC-CHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred HHHHhC-CHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 886655 432 47999999999999977664
No 37
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.27 E-value=2.3e-13 Score=145.90 Aligned_cols=132 Identities=20% Similarity=0.197 Sum_probs=98.5
Q ss_pred eeEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHh----C----CCccccccccccc------CCC
Q 007128 215 LRTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALER----G----IPAYLGVLGTKRL------PYP 275 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~r----g----~~~~~~~~d~~~l------pf~ 275 (617)
+.+|||||||+|.++..|++. .|+++|+++.++..++.+..... | .++.+..+|+..+ |++
T Consensus 84 ~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~~ 163 (383)
T 4fsd_A 84 GATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGVP 163 (383)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCCC
T ss_pred CCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCCC
Confidence 468999999999988888764 58999999988877764433221 3 4678888898887 899
Q ss_pred CCccccccccccccccccccceEEEEecccccCCceeeecChhhhcCCHHH----HHH----------HHHHHHHHHHhh
Q 007128 276 SRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEED----LRI----------WKEMSALVERMC 341 (617)
Q Consensus 276 ~~sFDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~----~~~----------w~~l~~l~~~~g 341 (617)
+++||+|+++.++ ++..+...+|+++.|+|||||+|+++++......... ... ++++.+++++.|
T Consensus 164 ~~~fD~V~~~~~l-~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 242 (383)
T 4fsd_A 164 DSSVDIVISNCVC-NLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEAG 242 (383)
T ss_dssp TTCEEEEEEESCG-GGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHTT
T ss_pred CCCEEEEEEccch-hcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHCC
Confidence 9999999998875 4555567899999999999999999754332211110 011 177899999999
Q ss_pred hhhhhc
Q 007128 342 WRIAAK 347 (617)
Q Consensus 342 f~~v~~ 347 (617)
|+.+..
T Consensus 243 F~~v~~ 248 (383)
T 4fsd_A 243 FRDVRL 248 (383)
T ss_dssp CCCEEE
T ss_pred CceEEE
Confidence 976543
No 38
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.26 E-value=6.2e-14 Score=136.62 Aligned_cols=125 Identities=17% Similarity=0.244 Sum_probs=91.6
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCcccccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 293 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~~ 293 (617)
.+|||||||+|.++..|++. .|+++|+++.++..++.+. ++.+..+|+..++ ++++||+|+|+.+++|+..
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~ 117 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL------GRPVRTMLFHQLD-AIDAYDAVWAHACLLHVPR 117 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------TSCCEECCGGGCC-CCSCEEEEEECSCGGGSCH
T ss_pred CcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc------CCceEEeeeccCC-CCCcEEEEEecCchhhcCH
Confidence 68999999999999999876 5888988886665554222 4556677888888 7789999999988666542
Q ss_pred -ccceEEEEecccccCCceeeecChhhhcCCHH------HHHHHHHHHHHHHHhh-hhhhhc
Q 007128 294 -RDGILLLELDRLLRPGGYFAYSSPEAYAQDEE------DLRIWKEMSALVERMC-WRIAAK 347 (617)
Q Consensus 294 -~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~------~~~~w~~l~~l~~~~g-f~~v~~ 347 (617)
+...+|+++.++|||||+++++.+........ ....-+++.++++++| |+++..
T Consensus 118 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~ 179 (211)
T 3e23_A 118 DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAV 179 (211)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEE
Confidence 34579999999999999999975433211000 0001267889999999 987654
No 39
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.26 E-value=3.2e-13 Score=139.14 Aligned_cols=101 Identities=19% Similarity=0.206 Sum_probs=80.9
Q ss_pred EEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhC----CCcccccccccccCCCCCccccccccccccc
Q 007128 217 TVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERG----IPAYLGVLGTKRLPYPSRSFELAHCSRCRID 290 (617)
Q Consensus 217 ~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg----~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h 290 (617)
+|||||||+|.++..|++. .|+++|+++.++..++.+. ...+ .++.+.++|+..+++ +++||+|+|+...+|
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~~~ 162 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRL-AEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGSIN 162 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHH-HTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHHHHT
T ss_pred cEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHH-hhcccccccceEEEeCchhcCCc-CCCcCEEEECCcccc
Confidence 8999999999999999876 5899999998887776433 3333 457888999999988 689999998766566
Q ss_pred cccc--cceEEEEecccccCCceeeecChhh
Q 007128 291 WLQR--DGILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 291 ~~~~--~~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
+.++ ...+|+++.++|||||+|++..+..
T Consensus 163 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 163 ELDEADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp TSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 6553 3569999999999999999975443
No 40
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.25 E-value=4.5e-13 Score=136.57 Aligned_cols=96 Identities=15% Similarity=0.324 Sum_probs=77.6
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCcccccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 293 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~~ 293 (617)
.+|||||||+|.++..|++. .|+++|+++.++..++ ++..++.+.++|+..+|+ +++||+|++..++ |+..
T Consensus 59 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~-----~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~l-~~~~ 131 (279)
T 3ccf_A 59 EFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKAR-----QNYPHLHFDVADARNFRV-DKPLDAVFSNAML-HWVK 131 (279)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHH-----HHCTTSCEEECCTTTCCC-SSCEEEEEEESCG-GGCS
T ss_pred CEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHH-----hhCCCCEEEECChhhCCc-CCCcCEEEEcchh-hhCc
Confidence 68999999999999988764 5889988886665443 333467788889999987 5799999998874 5555
Q ss_pred ccceEEEEecccccCCceeeecChh
Q 007128 294 RDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 294 ~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
++..+|+++.|+|||||++++..+.
T Consensus 132 d~~~~l~~~~~~LkpgG~l~~~~~~ 156 (279)
T 3ccf_A 132 EPEAAIASIHQALKSGGRFVAEFGG 156 (279)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHhcCCCcEEEEEecC
Confidence 6678999999999999999997654
No 41
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.25 E-value=5.1e-13 Score=133.94 Aligned_cols=99 Identities=15% Similarity=0.178 Sum_probs=80.7
Q ss_pred eeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWL 292 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~ 292 (617)
..+|||||||+|.++..+++. .|+++|+++.++..++... .....++.+..+|...+|+++++||+|++..++ |+.
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l-~~~ 117 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIPLPDESVHGVIVVHLW-HLV 117 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCCSCTTCEEEEEEESCG-GGC
T ss_pred CCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCCCCCCCeeEEEECCch-hhc
Confidence 468999999999999988875 5889999887776665332 222346788889999999999999999998874 555
Q ss_pred cccceEEEEecccccCCceeeec
Q 007128 293 QRDGILLLELDRLLRPGGYFAYS 315 (617)
Q Consensus 293 ~~~~~~L~el~RvLrPGG~lvis 315 (617)
.+...++.++.|+|||||++++.
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 118 PDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHCCCCcEEEEE
Confidence 55578999999999999999987
No 42
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.25 E-value=1.5e-13 Score=136.22 Aligned_cols=130 Identities=10% Similarity=0.024 Sum_probs=92.6
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHH-hCCCcccccccccccCCCCCccccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALE-RGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWL 292 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~-rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~ 292 (617)
.+|||||||+|.++..|++. .|+++|+++.++..++.+.... ...++.+.++|+..++ ++++||+|+|..++.++.
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~ 146 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFCAIE 146 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTTTSC
T ss_pred CCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhhcCC
Confidence 48999999999999998875 5899999998877776433221 1234778888988877 446999999988765553
Q ss_pred c-ccceEEEEecccccCCceeeecChhhhcCCHH--HHHHHHHHHHHHHHhhhhhhh
Q 007128 293 Q-RDGILLLELDRLLRPGGYFAYSSPEAYAQDEE--DLRIWKEMSALVERMCWRIAA 346 (617)
Q Consensus 293 ~-~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~--~~~~w~~l~~l~~~~gf~~v~ 346 (617)
. +...+++++.++|||||++++........... .....+++.++++..||+++.
T Consensus 147 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 203 (235)
T 3lcc_A 147 PEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVS 203 (235)
T ss_dssp GGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEE
T ss_pred HHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEE
Confidence 2 33569999999999999999864332111000 000126788999999997654
No 43
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.24 E-value=3.9e-13 Score=135.59 Aligned_cols=95 Identities=20% Similarity=0.206 Sum_probs=75.6
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccccc-cccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSR-CRIDWL 292 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~-~l~h~~ 292 (617)
.+|||||||+|.++..|++. .|+++|+++.++.. ++++..++.+..+|+..+++ +++||+|+|.. ++.|+.
T Consensus 52 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~-----a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~ 125 (263)
T 3pfg_A 52 ASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAI-----ARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLA 125 (263)
T ss_dssp CEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHH-----HHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSC
T ss_pred CcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHH-----HHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcC
Confidence 68999999999999999876 48888888765544 44444467788889999888 68999999987 654443
Q ss_pred --cccceEEEEecccccCCceeeecC
Q 007128 293 --QRDGILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 293 --~~~~~~L~el~RvLrPGG~lvis~ 316 (617)
.+...+|+++.++|||||++++..
T Consensus 126 ~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 126 GQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 244568999999999999999963
No 44
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.24 E-value=6.1e-13 Score=129.88 Aligned_cols=137 Identities=15% Similarity=0.189 Sum_probs=98.2
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecccccchhhhhhhc---ccCC-cchhhhhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGLIGSIHNWCEAY---STYP-RTYDLLHAWTVFSDIE 534 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl~~~~~~~~e~~---~~~p-~tfDlvh~~~~~~~~~ 534 (617)
.+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.+++.+.....-.+.+ +..+ .+||+|++..++. ..
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~~ 129 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADRGI---EAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-HQ 129 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-SS
T ss_pred CEEEEeCCCCCHHHHHHHHCCC---EEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh-hh
Confidence 5699999999999999999877 5666664 67888887775432222112222 2233 5699999988887 33
Q ss_pred hcCCCcccchhhccccccCcceEEEecChh--------------------------------HHHHHHHhhhhccccccc
Q 007128 535 KRGCSGEDLLLEMDRILRPTGFVIIRDKQS--------------------------------VVDFVKKYLRALNWEAVA 582 (617)
Q Consensus 535 ~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~--------------------------------~~~~~~~~~~~~~w~~~~ 582 (617)
++..+|.++.|+|||||+++|.+... ..+++.+++++.+++.+
T Consensus 130 ----~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~- 204 (227)
T 3e8s_A 130 ----DIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLV- 204 (227)
T ss_dssp ----CCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEE-
T ss_pred ----hHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEE-
Confidence 78899999999999999999987511 46789999999999986
Q ss_pred ccccCCCCCCCCCCeEEEEEEec
Q 007128 583 TTADASSDSDKDGDEVVFIVQKK 605 (617)
Q Consensus 583 ~~~~~~~~~~~~~~~~~l~~~K~ 605 (617)
.+.+............+++++|+
T Consensus 205 ~~~~~~~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 205 SLQEPQHPQSAVPQSLLMVAERH 227 (227)
T ss_dssp EEECCCCTTCSSCSCEEEEEEEC
T ss_pred EEecCCCCCCCCceeEEEEeecC
Confidence 55442222111234677888874
No 45
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.24 E-value=3.2e-13 Score=131.37 Aligned_cols=96 Identities=11% Similarity=0.137 Sum_probs=77.3
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhC-CCcccccccccccCCCCCccccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERG-IPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWL 292 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg-~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~ 292 (617)
.+|||||||+|.++..|++. .|+++|+++.++..++ +.+ .++.+..+|+..+ +++++||+|+|+.+++|+.
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~-----~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~ 121 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAG-----RHGLDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVP 121 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHG-----GGCCTTEEEEECCTTSC-CCSSCEEEEEEESCGGGSC
T ss_pred CeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHH-----hcCCCCeEEEecccccC-CCCCceeEEEEechhhcCC
Confidence 58999999999999998876 5888988886665554 344 4577888888887 7889999999998865554
Q ss_pred cc-cceEEEEecccccCCceeeecCh
Q 007128 293 QR-DGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 293 ~~-~~~~L~el~RvLrPGG~lvis~p 317 (617)
++ ...+|+++.++|+|||+++++++
T Consensus 122 ~~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 122 DDRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 32 25799999999999999999854
No 46
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.23 E-value=3.8e-13 Score=132.22 Aligned_cols=121 Identities=17% Similarity=0.183 Sum_probs=89.7
Q ss_pred eEEEeecccccccccccccchhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCcccccccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSSDVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRD 295 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~~~~ 295 (617)
.+|||||||+|.++..++.. +++|+++.++..+ +++ ++.+..+|+..+++++++||+|++..++.| ..++
T Consensus 49 ~~vLDiG~G~G~~~~~l~~~--~~vD~s~~~~~~a-----~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~~~~ 118 (219)
T 1vlm_A 49 GRGVEIGVGTGRFAVPLKIK--IGVEPSERMAEIA-----RKR--GVFVLKGTAENLPLKDESFDFALMVTTICF-VDDP 118 (219)
T ss_dssp SCEEEETCTTSTTHHHHTCC--EEEESCHHHHHHH-----HHT--TCEEEECBTTBCCSCTTCEEEEEEESCGGG-SSCH
T ss_pred CcEEEeCCCCCHHHHHHHHH--hccCCCHHHHHHH-----Hhc--CCEEEEcccccCCCCCCCeeEEEEcchHhh-ccCH
Confidence 58999999999999998877 8888887655444 333 456777888889988889999999988554 4555
Q ss_pred ceEEEEecccccCCceeeecChhhhcCCHHH---------------HHHHHHHHHHHHHhhhhhhh
Q 007128 296 GILLLELDRLLRPGGYFAYSSPEAYAQDEED---------------LRIWKEMSALVERMCWRIAA 346 (617)
Q Consensus 296 ~~~L~el~RvLrPGG~lvis~p~~~~~~~~~---------------~~~w~~l~~l~~~~gf~~v~ 346 (617)
..+|+++.++|+|||+++++.+......... ....+++.++++++||+++.
T Consensus 119 ~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~ 184 (219)
T 1vlm_A 119 ERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFK 184 (219)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEE
Confidence 7899999999999999999755432110000 00126788889999997654
No 47
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.23 E-value=8.7e-13 Score=137.02 Aligned_cols=101 Identities=13% Similarity=0.125 Sum_probs=78.8
Q ss_pred eeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCC--CcccccccccccCCCCCcccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRLPYPSRSFELAHCSRCRI 289 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~lpf~~~sFDlV~~s~~l~ 289 (617)
+.+|||||||+|.++..+++. .|+++|+++.++..++.. ..+.++ .+.+..+|...+| ++||+|++..++.
T Consensus 91 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~l~ 166 (318)
T 2fk8_A 91 GMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQV-LASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEAFE 166 (318)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHH-HHTSCCSSCEEEEESCGGGCC---CCCSEEEEESCGG
T ss_pred cCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-HHhcCCCCceEEEECChHHCC---CCcCEEEEeChHH
Confidence 368999999999999988865 589999998887776633 333343 3677778887765 7899999998866
Q ss_pred ccc-cccceEEEEecccccCCceeeecChhh
Q 007128 290 DWL-QRDGILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 290 h~~-~~~~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
|+. .+...+++++.++|||||++++.++..
T Consensus 167 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 167 HFGHENYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp GTCGGGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred hcCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 653 344679999999999999999976543
No 48
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.23 E-value=4.2e-13 Score=127.99 Aligned_cols=103 Identities=17% Similarity=0.107 Sum_probs=74.1
Q ss_pred eeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCC-CcccccccccccC-CCCCccccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRLP-YPSRSFELAHCSRCRID 290 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~lp-f~~~sFDlV~~s~~l~h 290 (617)
+.+|||+|||+|.++..|++. .|+++|+++.++..++.+ +.+.++ ++.+...+...++ +.+++||+|+++...++
T Consensus 23 ~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~-~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~~ 101 (185)
T 3mti_A 23 ESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQR-LSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYLP 101 (185)
T ss_dssp TCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHH-HHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC---
T ss_pred CCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHH-HHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCCC
Confidence 368999999999999999875 699999999998888743 334443 4666666666653 45789999987643232
Q ss_pred c--------ccccceEEEEecccccCCceeeecChh
Q 007128 291 W--------LQRDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 291 ~--------~~~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
. ......++.++.|+|||||++++....
T Consensus 102 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 102 SADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp --------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 2 112234778999999999999997544
No 49
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.22 E-value=7.2e-13 Score=129.73 Aligned_cols=100 Identities=14% Similarity=0.125 Sum_probs=78.3
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC------CcccccccccccCCCCCcccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI------PAYLGVLGTKRLPYPSRSFELAHCS 285 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~------~~~~~~~d~~~lpf~~~sFDlV~~s 285 (617)
.+|||||||+|.++..|++. .|+++|+++.++..++.+. ...++ ++.+..+|+..+++++++||+|+|.
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 109 (217)
T 3jwh_A 31 RRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERL-DRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATVI 109 (217)
T ss_dssp CEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHH-TTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEEE
T ss_pred CEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHH-HHhcCCcccCcceEEEeCCcccccccCCCcCEEeeH
Confidence 58999999999999998864 5899999998887776433 22222 4777888887777777899999999
Q ss_pred cccccccccc--ceEEEEecccccCCceeeecCh
Q 007128 286 RCRIDWLQRD--GILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 286 ~~l~h~~~~~--~~~L~el~RvLrPGG~lvis~p 317 (617)
.++.|+ .++ ..+++++.++|||||+++++..
T Consensus 110 ~~l~~~-~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 110 EVIEHL-DLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp SCGGGC-CHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred HHHHcC-CHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 886655 433 5799999999999997777643
No 50
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.22 E-value=7e-13 Score=134.31 Aligned_cols=100 Identities=13% Similarity=0.030 Sum_probs=78.4
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHH-----------------HhCCCcccccccccccCCCC
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFAL-----------------ERGIPAYLGVLGTKRLPYPS 276 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~-----------------~rg~~~~~~~~d~~~lpf~~ 276 (617)
.+|||+|||+|..+..|++. .|+|+|+|+.++..++.+... ..+.++.+.++|+..+++++
T Consensus 70 ~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~~~ 149 (252)
T 2gb4_A 70 LRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRAN 149 (252)
T ss_dssp CEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGGGC
T ss_pred CeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCccc
Confidence 58999999999999999886 499999999988777533321 12356788899999998874
Q ss_pred -Cccccccccccccccccc-cceEEEEecccccCCceeeec
Q 007128 277 -RSFELAHCSRCRIDWLQR-DGILLLELDRLLRPGGYFAYS 315 (617)
Q Consensus 277 -~sFDlV~~s~~l~h~~~~-~~~~L~el~RvLrPGG~lvis 315 (617)
++||+|++..++.+...+ ...+++++.|+|||||++++.
T Consensus 150 ~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 150 IGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp CCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 899999987765554332 235899999999999999754
No 51
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.22 E-value=6.7e-13 Score=129.58 Aligned_cols=104 Identities=13% Similarity=0.246 Sum_probs=80.6
Q ss_pred CceeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccccccccc
Q 007128 213 GRLRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRID 290 (617)
Q Consensus 213 ~~~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h 290 (617)
.+..+|||||||+|.++..|++. .|+++|+++.++..++..... ..++.+.++|+..++ ++++||+|+|+.+++|
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~ 126 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKR--WSHISWAATDILQFS-TAELFDLIVVAEVLYY 126 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTT--CSSEEEEECCTTTCC-CSCCEEEEEEESCGGG
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhccc--CCCeEEEEcchhhCC-CCCCccEEEEccHHHh
Confidence 34579999999999999999876 589999988777666533222 226788888998888 6789999999988655
Q ss_pred ccccc--ceEEEEecccccCCceeeecChhh
Q 007128 291 WLQRD--GILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 291 ~~~~~--~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
+.+.. ..++.++.++|||||+++++++..
T Consensus 127 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 127 LEDMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp SSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 44321 357999999999999999976443
No 52
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.22 E-value=4.9e-13 Score=138.39 Aligned_cols=99 Identities=18% Similarity=0.162 Sum_probs=78.5
Q ss_pred eEEEeeccccccccccccc-----chhhhhccCCCccchhhhHHHHHhCCC--cccccccccccCCCCCccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLS-----SDVITMSLAPNDVHQNQIQFALERGIP--AYLGVLGTKRLPYPSRSFELAHCSRCR 288 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~-----~~V~gvDis~~dl~~a~~~~a~~rg~~--~~~~~~d~~~lpf~~~sFDlV~~s~~l 288 (617)
.+|||||||+|.++..|+. ..|+++|+++.++..++. .+...++. +.+..+|+..++++ ++||+|+|..++
T Consensus 120 ~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~ 197 (305)
T 3ocj_A 120 CVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATR-LAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNGLN 197 (305)
T ss_dssp CEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHH-HHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCSSG
T ss_pred CEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHH-HHHhcCCCCceEEEECchhcCCcc-CCeEEEEECChh
Confidence 6899999999999988852 268999999988877763 33334443 77888999999988 899999998876
Q ss_pred cccccccc--eEEEEecccccCCceeeecC
Q 007128 289 IDWLQRDG--ILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 289 ~h~~~~~~--~~L~el~RvLrPGG~lvis~ 316 (617)
+|+.+... .+++++.++|||||+++++.
T Consensus 198 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 198 IYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp GGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 65544422 37999999999999999876
No 53
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.21 E-value=6.2e-14 Score=151.48 Aligned_cols=126 Identities=14% Similarity=0.163 Sum_probs=90.6
Q ss_pred eeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcc---cccccccccCCCCCcccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAY---LGVLGTKRLPYPSRSFELAHCSRCRI 289 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~---~~~~d~~~lpf~~~sFDlV~~s~~l~ 289 (617)
..+|||||||+|.++..|++. .|+|+|+++.++. .|++++++.. +...+...+|+++++||+|++..+++
T Consensus 108 ~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~-----~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~ 182 (416)
T 4e2x_A 108 DPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAA-----KAREKGIRVRTDFFEKATADDVRRTEGPANVIYAANTLC 182 (416)
T ss_dssp SCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHH-----HHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGG
T ss_pred CCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHH-----HHHHcCCCcceeeechhhHhhcccCCCCEEEEEECChHH
Confidence 468999999999999999876 5888888776554 4444454422 33445667788889999999999866
Q ss_pred ccccccceEEEEecccccCCceeeecChhhhcC----------CHH-HHHHHHHHHHHHHHhhhhhhh
Q 007128 290 DWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQ----------DEE-DLRIWKEMSALVERMCWRIAA 346 (617)
Q Consensus 290 h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~----------~~~-~~~~w~~l~~l~~~~gf~~v~ 346 (617)
|+ .++..+|+++.|+|||||++++..+..... .++ .....+++.+++++.||+++.
T Consensus 183 h~-~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~ 249 (416)
T 4e2x_A 183 HI-PYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVD 249 (416)
T ss_dssp GC-TTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEE
T ss_pred hc-CCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEE
Confidence 55 456789999999999999999986542110 000 000016788899999997654
No 54
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.21 E-value=6.8e-13 Score=129.06 Aligned_cols=99 Identities=23% Similarity=0.272 Sum_probs=79.9
Q ss_pred ceeEEEeecccccccccccccc-hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccccccccccc
Q 007128 214 RLRTVLDVGCGVASFGAYLLSS-DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWL 292 (617)
Q Consensus 214 ~~~~VLDVGCG~G~~~~~L~~~-~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~ 292 (617)
+..+|||||||+|.++..+ .. .++++|+++.++..++ ++..++.+..+|...+|+++++||+|++..++.| .
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-~~~~v~~vD~s~~~~~~a~-----~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~ 108 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-PYPQKVGVEPSEAMLAVGR-----RRAPEATWVRAWGEALPFPGESFDVVLLFTTLEF-V 108 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-CCSEEEEECCCHHHHHHHH-----HHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTT-C
T ss_pred CCCeEEEECCCCCHhHHhC-CCCeEEEEeCCHHHHHHHH-----HhCCCcEEEEcccccCCCCCCcEEEEEEcChhhh-c
Confidence 3468999999999999888 55 7899998886655444 3334567788889999999999999999988554 4
Q ss_pred cccceEEEEecccccCCceeeecChhh
Q 007128 293 QRDGILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 293 ~~~~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
.+...+++++.++|||||++++++++.
T Consensus 109 ~~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 109 EDVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 455789999999999999999987654
No 55
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.21 E-value=1e-12 Score=127.25 Aligned_cols=102 Identities=17% Similarity=0.250 Sum_probs=81.0
Q ss_pred eEEEeeccccccccccc-ccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYL-LSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWL 292 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L-~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~ 292 (617)
.+|||+|||+|.++..+ +.. .|+++|+++.++..++. .+...+.++.+..+|+..+++++++||+|+|..+++|+.
T Consensus 25 ~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 103 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAEN-FSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFHMR 103 (209)
T ss_dssp SEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHH-HHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGGSC
T ss_pred CEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHHhcCCceEEEECchhhCCCCCCceeEEEEcChHHhCC
Confidence 68999999999885433 332 58999999988887763 344445677888889999999889999999988766652
Q ss_pred -cccceEEEEecccccCCceeeecChh
Q 007128 293 -QRDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 293 -~~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
.+...+++++.++|||||+++++.+.
T Consensus 104 ~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 104 KNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 34467999999999999999997654
No 56
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.20 E-value=2.2e-13 Score=128.02 Aligned_cols=122 Identities=13% Similarity=0.116 Sum_probs=87.1
Q ss_pred eeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWL 292 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~ 292 (617)
..+|||+|||+|.++..+++. .++++|+++.++..+ +++..++.+...| +++++++||+|++..++.|+
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a-----~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~~- 88 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEV-----KEKFDSVITLSDP---KEIPDNSVDFILFANSFHDM- 88 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHH-----HHHCTTSEEESSG---GGSCTTCEEEEEEESCSTTC-
T ss_pred CCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHH-----HHhCCCcEEEeCC---CCCCCCceEEEEEccchhcc-
Confidence 368999999999999998876 588888887655444 3334456777666 78888999999999886555
Q ss_pred cccceEEEEecccccCCceeeecChhhhcCC----HHHHHHHHHHHHHHHHhhhhhhhc
Q 007128 293 QRDGILLLELDRLLRPGGYFAYSSPEAYAQD----EEDLRIWKEMSALVERMCWRIAAK 347 (617)
Q Consensus 293 ~~~~~~L~el~RvLrPGG~lvis~p~~~~~~----~~~~~~w~~l~~l~~~~gf~~v~~ 347 (617)
.+...+++++.|+|||||++++..+...... ......-+++.++++ ||+.+..
T Consensus 89 ~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~ 145 (170)
T 3i9f_A 89 DDKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKR 145 (170)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEE
T ss_pred cCHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEc
Confidence 4557899999999999999999754322110 000000156777777 9976553
No 57
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.19 E-value=4e-13 Score=144.14 Aligned_cols=103 Identities=19% Similarity=0.115 Sum_probs=83.0
Q ss_pred eeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCcccccccccccccc-
Q 007128 215 LRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDW- 291 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~- 291 (617)
+.+|||+|||+|.++..+++. .|+++|+++.++..++. .+...++++.+...|+...+.++++||+|+|+..+ |+
T Consensus 234 ~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~-n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~-~~~ 311 (381)
T 3dmg_A 234 GRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQK-GLEANALKAQALHSDVDEALTEEARFDIIVTNPPF-HVG 311 (381)
T ss_dssp TCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHH-HHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCC-CTT
T ss_pred CCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHH-HHHHcCCCeEEEEcchhhccccCCCeEEEEECCch-hhc
Confidence 368999999999999999876 58999999988887773 44555667888889998888777899999988764 43
Q ss_pred ----ccccceEEEEecccccCCceeeecChhh
Q 007128 292 ----LQRDGILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 292 ----~~~~~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
......++.++.++|||||+++++....
T Consensus 312 ~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 312 GAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp CSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred ccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 2233468999999999999999986544
No 58
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.19 E-value=1.9e-12 Score=125.06 Aligned_cols=126 Identities=13% Similarity=0.129 Sum_probs=91.1
Q ss_pred EEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCcccccccccccccc-cc
Q 007128 217 TVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDW-LQ 293 (617)
Q Consensus 217 ~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~-~~ 293 (617)
+|||||||+|.++..|++. .|+++|+++.++..++. .....+.++.+..+|+..+++++++||+|+|+.. |+ ..
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~--~~~~~ 108 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQ-LAQEKGVKITTVQSNLADFDIVADAWEGIVSIFC--HLPSS 108 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHH-HHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECC--CCCHH
T ss_pred CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHH-HHHhcCCceEEEEcChhhcCCCcCCccEEEEEhh--cCCHH
Confidence 8999999999999888876 58999999988877763 3334456788888899999988899999998643 33 23
Q ss_pred ccceEEEEecccccCCceeeecChhhhcCC--------HHHHHHHHHHHHHHHHhhhhhhhc
Q 007128 294 RDGILLLELDRLLRPGGYFAYSSPEAYAQD--------EEDLRIWKEMSALVERMCWRIAAK 347 (617)
Q Consensus 294 ~~~~~L~el~RvLrPGG~lvis~p~~~~~~--------~~~~~~w~~l~~l~~~~gf~~v~~ 347 (617)
+...++.++.++|+|||+++++.+...... ......-+++.++++ ||+++..
T Consensus 109 ~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~ 168 (202)
T 2kw5_A 109 LRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIA 168 (202)
T ss_dssp HHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEE
Confidence 446799999999999999999854332110 000000156677776 8866543
No 59
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.19 E-value=8.6e-13 Score=128.79 Aligned_cols=123 Identities=17% Similarity=0.220 Sum_probs=87.7
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCccccccccccc---CCCC-Ccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRL---PYPS-RSFELAHCSRCRI 289 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~l---pf~~-~sFDlV~~s~~l~ 289 (617)
.+|||||||+|.++..|++. .|+++|+++.++..+ +++ ..+.+...+...+ ++.. ++||+|+|+.+++
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a-----~~~-~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~ 127 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAA-----RAA-GAGEVHLASYAQLAEAKVPVGKDYDLICANFALL 127 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHH-----HHT-CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC
T ss_pred CEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHH-----HHh-cccccchhhHHhhcccccccCCCccEEEECchhh
Confidence 68999999999999998876 588888887655444 333 3455666666655 5554 4599999998854
Q ss_pred ccccccceEEEEecccccCCceeeecChhhhcCCHH-----------------------HHHHHHHHHHHHHHhhhhhhh
Q 007128 290 DWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEE-----------------------DLRIWKEMSALVERMCWRIAA 346 (617)
Q Consensus 290 h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~-----------------------~~~~w~~l~~l~~~~gf~~v~ 346 (617)
..+...+++++.++|||||+++++++........ .....+++.++++++||+++.
T Consensus 128 --~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 205 (227)
T 3e8s_A 128 --HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVS 205 (227)
T ss_dssp --SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEE
T ss_pred --hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEE
Confidence 4566789999999999999999976533211100 000126788999999997764
No 60
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.18 E-value=1.8e-12 Score=133.63 Aligned_cols=99 Identities=12% Similarity=0.160 Sum_probs=81.2
Q ss_pred eeEEEeeccccccccccccc---c--hhhhhccCCCccchhhhHHHHH--hCCCcccccccccccCCCC------Ccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLS---S--DVITMSLAPNDVHQNQIQFALE--RGIPAYLGVLGTKRLPYPS------RSFEL 281 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~---~--~V~gvDis~~dl~~a~~~~a~~--rg~~~~~~~~d~~~lpf~~------~sFDl 281 (617)
..+|||||||+|.++..|++ . .|+|+|+++.++..++...... ...++.+.++|+..+++++ ++||+
T Consensus 37 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 116 (299)
T 3g5t_A 37 RKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKIDM 116 (299)
T ss_dssp CSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCeeE
Confidence 46899999999999999883 2 5899999998887777443332 1446888899999998887 89999
Q ss_pred ccccccccccccccceEEEEecccccCCceeeec
Q 007128 282 AHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYS 315 (617)
Q Consensus 282 V~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis 315 (617)
|+|+.+++| . +...++.++.|+|||||++++.
T Consensus 117 V~~~~~l~~-~-~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 117 ITAVECAHW-F-DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp EEEESCGGG-S-CHHHHHHHHHHHEEEEEEEEEE
T ss_pred EeHhhHHHH-h-CHHHHHHHHHHhcCCCcEEEEE
Confidence 999988554 4 6678999999999999999984
No 61
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.18 E-value=1.7e-12 Score=129.93 Aligned_cols=97 Identities=18% Similarity=0.284 Sum_probs=78.7
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRID 290 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h 290 (617)
..+|||||||+|.++..+++. .++++|+++.++..+ +++..++.+..+|+..++ ++++||+|+|+.++ |
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a-----~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l-~ 106 (259)
T 2p35_A 34 VLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKA-----ADRLPNTNFGKADLATWK-PAQKADLLYANAVF-Q 106 (259)
T ss_dssp CSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHH-----HHHSTTSEEEECCTTTCC-CSSCEEEEEEESCG-G
T ss_pred CCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHH-----HHhCCCcEEEECChhhcC-ccCCcCEEEEeCch-h
Confidence 368999999999999888765 588888887665444 344456788888998888 78899999998874 5
Q ss_pred cccccceEEEEecccccCCceeeecChh
Q 007128 291 WLQRDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 291 ~~~~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
|..+...+|+++.++|||||+++++.+.
T Consensus 107 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 107 WVPDHLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp GSTTHHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred hCCCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 5566678999999999999999998754
No 62
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.18 E-value=6.8e-13 Score=135.81 Aligned_cols=120 Identities=17% Similarity=0.198 Sum_probs=88.5
Q ss_pred hhHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHh----CCCcccc
Q 007128 192 DKYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALER----GIPAYLG 265 (617)
Q Consensus 192 ~~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~r----g~~~~~~ 265 (617)
..+.+.+.+.+.. .. ..+|||||||+|.++..|++. .|+++|+++.++..++.+..... ..++.+.
T Consensus 43 ~~~~~~l~~~l~~------~~--~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~ 114 (293)
T 3thr_A 43 AEYKAWLLGLLRQ------HG--CHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIE 114 (293)
T ss_dssp HHHHHHHHHHHHH------TT--CCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEE
T ss_pred HHHHHHHHHHhcc------cC--CCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEe
Confidence 4455566666654 22 368999999999999999876 58999999988877764332211 1234566
Q ss_pred cccccccC---CCCCcccccccc-cccccccc------ccceEEEEecccccCCceeeecChhh
Q 007128 266 VLGTKRLP---YPSRSFELAHCS-RCRIDWLQ------RDGILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 266 ~~d~~~lp---f~~~sFDlV~~s-~~l~h~~~------~~~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
.+|...++ +++++||+|+|. .++.|+.+ ....+++++.++|||||+++++.++.
T Consensus 115 ~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (293)
T 3thr_A 115 EANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNY 178 (293)
T ss_dssp ECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred ecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCH
Confidence 77888887 888999999997 67555543 14679999999999999999986643
No 63
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.17 E-value=1.5e-12 Score=127.53 Aligned_cols=103 Identities=19% Similarity=0.344 Sum_probs=81.9
Q ss_pred eeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCcccccccccccccc-
Q 007128 215 LRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDW- 291 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~- 291 (617)
..+|||+|||+|.++..+++. .++++|+++.++..++.. ....+.++.+..+|+..+++++++||+|+|+.++.++
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~ 117 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREY-AKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHFE 117 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGCC
T ss_pred CCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHH-HHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhCC
Confidence 468999999999999888776 589999999888777643 3334466788889998888888899999998773222
Q ss_pred ccccceEEEEecccccCCceeeecChh
Q 007128 292 LQRDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 292 ~~~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
..+...+++++.++|+|||++++..+.
T Consensus 118 ~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 118 PLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 234467999999999999999997654
No 64
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.17 E-value=2e-12 Score=126.26 Aligned_cols=107 Identities=21% Similarity=0.298 Sum_probs=86.6
Q ss_pred eEEEeecccccccccccccchhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCcccccccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSSDVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRD 295 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~~~~ 295 (617)
.+|||||||+|.++..++ ..++++|+++. ++.+..+|+..+|+++++||+|+|..++ |+ .+.
T Consensus 69 ~~vLDiG~G~G~~~~~l~-~~v~~~D~s~~---------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l-~~-~~~ 130 (215)
T 2zfu_A 69 LVVADFGCGDCRLASSIR-NPVHCFDLASL---------------DPRVTVCDMAQVPLEDESVDVAVFCLSL-MG-TNI 130 (215)
T ss_dssp SCEEEETCTTCHHHHHCC-SCEEEEESSCS---------------STTEEESCTTSCSCCTTCEEEEEEESCC-CS-SCH
T ss_pred CeEEEECCcCCHHHHHhh-ccEEEEeCCCC---------------CceEEEeccccCCCCCCCEeEEEEehhc-cc-cCH
Confidence 589999999999998885 57899999885 3456677888899988999999998885 54 555
Q ss_pred ceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhhhh
Q 007128 296 GILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRIAA 346 (617)
Q Consensus 296 ~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~v~ 346 (617)
..++.++.++|+|||+++++.+...... -+++.+++++.||+++.
T Consensus 131 ~~~l~~~~~~L~~gG~l~i~~~~~~~~~------~~~~~~~l~~~Gf~~~~ 175 (215)
T 2zfu_A 131 RDFLEEANRVLKPGGLLKVAEVSSRFED------VRTFLRAVTKLGFKIVS 175 (215)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECGGGCSC------HHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHHhCCCCeEEEEEEcCCCCCC------HHHHHHHHHHCCCEEEE
Confidence 7799999999999999999865543222 25688889999997765
No 65
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.16 E-value=9.7e-13 Score=136.76 Aligned_cols=104 Identities=9% Similarity=0.044 Sum_probs=74.1
Q ss_pred eeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCCC-------cccccccc------ccc--CCCC
Q 007128 215 LRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGIP-------AYLGVLGT------KRL--PYPS 276 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~~-------~~~~~~d~------~~l--pf~~ 276 (617)
+.+|||||||+|..+..++.. .|+|+|+|+.+++.|+.+. .+.+.. +.+.+.|+ ..+ ++++
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~-~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERY-NKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHH-HHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHH-HhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 468999999999765554433 5999999999999888543 333322 33444444 333 4677
Q ss_pred Ccccccccccccccccc--ccceEEEEecccccCCceeeecChhh
Q 007128 277 RSFELAHCSRCRIDWLQ--RDGILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 277 ~sFDlV~~s~~l~h~~~--~~~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
++||+|+|..++++..+ +...+|+++.|+|||||+|++++++.
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~ 172 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDG 172 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 89999999887433222 22569999999999999999987654
No 66
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.15 E-value=1e-12 Score=134.15 Aligned_cols=103 Identities=17% Similarity=0.260 Sum_probs=80.5
Q ss_pred eEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCC--CcccccccccccCC-CCCcccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRLPY-PSRSFELAHCSRCRI 289 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~lpf-~~~sFDlV~~s~~l~ 289 (617)
.+|||||||+|.++..+++. .|+++|+++.++..++.+. ...+. ++.+.++|+..+|+ ++++||+|+|..+++
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~ 144 (298)
T 1ri5_A 66 DSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRA-RNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSFH 144 (298)
T ss_dssp CEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHH-HTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCGG
T ss_pred CeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HhcCCCccEEEEECCccccccCCCCCcCEEEECchhh
Confidence 58999999999998888764 5899999998887776433 33333 46788889988888 578999999988754
Q ss_pred cc---ccccceEEEEecccccCCceeeecChhh
Q 007128 290 DW---LQRDGILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 290 h~---~~~~~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
+. ..+...+|+++.++|||||+++++.+..
T Consensus 145 ~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 145 YAFSTSESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp GGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 31 3344679999999999999999986543
No 67
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.15 E-value=2.8e-12 Score=122.87 Aligned_cols=99 Identities=18% Similarity=0.266 Sum_probs=79.5
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCC-CcccccccccccCCCCCccccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRLPYPSRSFELAHCSRCRIDWL 292 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~ 292 (617)
.+|||+|||+|.++..+++. .++++|+++.++..++.. +...++ ++.+..+|...+++ +++||+|++..++.|+.
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~~~ 111 (199)
T 2xvm_A 34 GKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERI-KSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLMFLE 111 (199)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGGGSC
T ss_pred CeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHH-HHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhhhCC
Confidence 58999999999999988875 589999999888777643 333444 57788889988888 78999999998865543
Q ss_pred c-ccceEEEEecccccCCceeeecC
Q 007128 293 Q-RDGILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 293 ~-~~~~~L~el~RvLrPGG~lvis~ 316 (617)
. +...+++++.++|+|||++++..
T Consensus 112 ~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 112 AKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp GGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 2 34569999999999999988753
No 68
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.15 E-value=6.4e-13 Score=137.04 Aligned_cols=105 Identities=14% Similarity=0.169 Sum_probs=76.6
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhC-------------------------------
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERG------------------------------- 259 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg------------------------------- 259 (617)
+.+|||||||+|.++..|+.. .|+|+|+++.++..++........
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCF 126 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC------------------------------------
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccccc
Confidence 368999999999999988875 589999999888777643221110
Q ss_pred ---------------------------CCcccccccccccC-----CCCCccccccccccccccc-----cccceEEEEe
Q 007128 260 ---------------------------IPAYLGVLGTKRLP-----YPSRSFELAHCSRCRIDWL-----QRDGILLLEL 302 (617)
Q Consensus 260 ---------------------------~~~~~~~~d~~~lp-----f~~~sFDlV~~s~~l~h~~-----~~~~~~L~el 302 (617)
.++.+..+|....+ +.+++||+|+|..++.++. .....+|+++
T Consensus 127 p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~ 206 (292)
T 3g07_A 127 PASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRI 206 (292)
T ss_dssp ---------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHH
Confidence 24667777765443 5678999999988753322 1335699999
Q ss_pred cccccCCceeeecChhh
Q 007128 303 DRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 303 ~RvLrPGG~lvis~p~~ 319 (617)
.++|||||+|++...++
T Consensus 207 ~~~LkpGG~lil~~~~~ 223 (292)
T 3g07_A 207 YRHLRPGGILVLEPQPW 223 (292)
T ss_dssp HHHEEEEEEEEEECCCH
T ss_pred HHHhCCCcEEEEecCCc
Confidence 99999999999975443
No 69
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.15 E-value=3.5e-12 Score=123.67 Aligned_cols=117 Identities=18% Similarity=0.156 Sum_probs=87.6
Q ss_pred eeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCCC-cccccccccccCCCCCccccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGIP-AYLGVLGTKRLPYPSRSFELAHCSRCRID 290 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~~-~~~~~~d~~~lpf~~~sFDlV~~s~~l~h 290 (617)
..+|||+|||+|.++..+++. .|+++|+++.++..++. .+...+.. +.+..+|... +.+++||+|+++..+ +
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~v~~~~~d~~~--~~~~~fD~i~~~~~~-~ 136 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEE-NAALNGIYDIALQKTSLLA--DVDGKFDLIVANILA-E 136 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHH-HHHHTTCCCCEEEESSTTT--TCCSCEEEEEEESCH-H
T ss_pred CCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHcCCCceEEEeccccc--cCCCCceEEEECCcH-H
Confidence 368999999999999888765 58999999988877764 33344444 7777777655 345899999987653 3
Q ss_pred cccccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhhhh
Q 007128 291 WLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRIAA 346 (617)
Q Consensus 291 ~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~v~ 346 (617)
+. ..+++++.++|+|||+++++..... ..+.+.+++++.||+.+.
T Consensus 137 ~~---~~~l~~~~~~L~~gG~l~~~~~~~~--------~~~~~~~~~~~~Gf~~~~ 181 (205)
T 3grz_A 137 IL---LDLIPQLDSHLNEDGQVIFSGIDYL--------QLPKIEQALAENSFQIDL 181 (205)
T ss_dssp HH---HHHGGGSGGGEEEEEEEEEEEEEGG--------GHHHHHHHHHHTTEEEEE
T ss_pred HH---HHHHHHHHHhcCCCCEEEEEecCcc--------cHHHHHHHHHHcCCceEE
Confidence 32 4689999999999999999754332 125677888999997654
No 70
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.13 E-value=1.9e-12 Score=128.23 Aligned_cols=99 Identities=21% Similarity=0.318 Sum_probs=77.8
Q ss_pred eEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWL 292 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~ 292 (617)
.+|||||||+|.++..+++. .++++|+++.++..++..... .++.+..+|...+++++++||+|++..++.| .
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~ 120 (243)
T 3bkw_A 45 LRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKLHLPQDSFDLAYSSLALHY-V 120 (243)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGCCCCTTCEEEEEEESCGGG-C
T ss_pred CEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhccCCCCCceEEEEeccccc-c
Confidence 68999999999999888765 578888887666544422111 2467788888889988899999999987554 4
Q ss_pred cccceEEEEecccccCCceeeecChh
Q 007128 293 QRDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 293 ~~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
.+...+|+++.++|+|||+++++.+.
T Consensus 121 ~~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 121 EDVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred chHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 55578999999999999999997643
No 71
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.13 E-value=1.7e-11 Score=122.62 Aligned_cols=123 Identities=13% Similarity=0.125 Sum_probs=79.2
Q ss_pred eeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHH---hCCCccccc-ccccccCCCCCcccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALE---RGIPAYLGV-LGTKRLPYPSRSFELAHCSRC 287 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~---rg~~~~~~~-~d~~~lpf~~~sFDlV~~s~~ 287 (617)
+.+|||||||+|.++..|++. .|+|+|+++.++..+..+..+. ...++.+.. .+....++...+||+++++.
T Consensus 38 g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~l- 116 (232)
T 3opn_A 38 GKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFISL- 116 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSCG-
T ss_pred CCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhhH-
Confidence 368999999999999988875 5899999999988654321110 012333332 22222124456788887542
Q ss_pred ccccccccceEEEEecccccCCceeeecChhhhcCC------------HH-HHHHHHHHHHHHHHhhhhhhh
Q 007128 288 RIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQD------------EE-DLRIWKEMSALVERMCWRIAA 346 (617)
Q Consensus 288 l~h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~------------~~-~~~~w~~l~~l~~~~gf~~v~ 346 (617)
..+|.++.|+|||||++++...+.+... .. .....+++.++++++||++..
T Consensus 117 --------~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~ 180 (232)
T 3opn_A 117 --------DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKG 180 (232)
T ss_dssp --------GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEE
T ss_pred --------HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEE
Confidence 4689999999999999998632221111 11 111237788899999997543
No 72
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.13 E-value=7.8e-12 Score=126.55 Aligned_cols=100 Identities=14% Similarity=0.176 Sum_probs=73.5
Q ss_pred eEEEeecccccccccccccc-----hhhhhccCCC------ccchhhhHHHHHhCC--Cccccccc---ccccCCCCCcc
Q 007128 216 RTVLDVGCGVASFGAYLLSS-----DVITMSLAPN------DVHQNQIQFALERGI--PAYLGVLG---TKRLPYPSRSF 279 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~------dl~~a~~~~a~~rg~--~~~~~~~d---~~~lpf~~~sF 279 (617)
.+|||||||+|.++..+++. .|+++|+++. ++..++.+. ...++ ++.+..+| ...+|+++++|
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~~f 123 (275)
T 3bkx_A 45 EKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHL-LAGPLGDRLTVHFNTNLSDDLGPIADQHF 123 (275)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHH-HTSTTGGGEEEECSCCTTTCCGGGTTCCC
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHH-HhcCCCCceEEEECChhhhccCCCCCCCE
Confidence 68999999999999888764 5899999986 666665333 33333 46677777 56678888999
Q ss_pred ccccccccccccccccceEEEEecccccCCceeeecCh
Q 007128 280 ELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 280 DlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p 317 (617)
|+|+|..+++|+. ++..+++.+.++++|||++++...
T Consensus 124 D~v~~~~~l~~~~-~~~~~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 124 DRVVLAHSLWYFA-SANALALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp SEEEEESCGGGSS-CHHHHHHHHHHHTTTCSEEEEEEE
T ss_pred EEEEEccchhhCC-CHHHHHHHHHHHhCCCCEEEEEEe
Confidence 9999998865554 434555556666677999999643
No 73
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.12 E-value=6.8e-12 Score=125.85 Aligned_cols=130 Identities=14% Similarity=0.170 Sum_probs=90.6
Q ss_pred ceeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCC------------------------------
Q 007128 214 RLRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGI------------------------------ 260 (617)
Q Consensus 214 ~~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~------------------------------ 260 (617)
++.+|||||||+|.++..++.. .|+++|+++.++..++..... .+.
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKK-EPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTT-CTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhc-CCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 4579999999999999888765 589999999888776533221 110
Q ss_pred Cc-ccccccccccC-CCC---Ccccccccccccccc---ccccceEEEEecccccCCceeeecChhhh----------cC
Q 007128 261 PA-YLGVLGTKRLP-YPS---RSFELAHCSRCRIDW---LQRDGILLLELDRLLRPGGYFAYSSPEAY----------AQ 322 (617)
Q Consensus 261 ~~-~~~~~d~~~lp-f~~---~sFDlV~~s~~l~h~---~~~~~~~L~el~RvLrPGG~lvis~p~~~----------~~ 322 (617)
.+ .+..+|+...+ +++ ++||+|+|..++++. ..+...+|+++.|+|||||+|+++..... ..
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~ 214 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSS 214 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEEC
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccccc
Confidence 14 56777877654 355 899999999886522 22346799999999999999999753210 00
Q ss_pred CHHHHHHHHHHHHHHHHhhhhhhhc
Q 007128 323 DEEDLRIWKEMSALVERMCWRIAAK 347 (617)
Q Consensus 323 ~~~~~~~w~~l~~l~~~~gf~~v~~ 347 (617)
.... -+++.++++++||+++..
T Consensus 215 ~~~~---~~~~~~~l~~aGf~~~~~ 236 (265)
T 2i62_A 215 LPLG---WETVRDAVEEAGYTIEQF 236 (265)
T ss_dssp CCCC---HHHHHHHHHHTTCEEEEE
T ss_pred cccC---HHHHHHHHHHCCCEEEEE
Confidence 0000 147888999999976543
No 74
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.10 E-value=4.8e-12 Score=122.77 Aligned_cols=130 Identities=17% Similarity=0.137 Sum_probs=92.5
Q ss_pred hHHHhhhcchhhHhhhcCC-ceEEEEeecCCC-CCceEEEeec----ccccchhhhhhhccc--CC-cchhhhhhhhhhh
Q 007128 461 NLMDMKAHLGSFAAALKEK-DVWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWCEAYST--YP-RTYDLLHAWTVFS 531 (617)
Q Consensus 461 ~vLD~g~G~G~fa~~L~~~-~~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~e~~~~--~p-~tfDlvh~~~~~~ 531 (617)
+|||+|||+|.++..|+++ +. +|+.+|. +.+++.+.++ |+-..+...+.++.. ++ ++||+|++..++.
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~ 122 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSDF---SIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVF 122 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSEE---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGG
T ss_pred EEEEECCCCCHHHHHHHHcCCC---eEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHh
Confidence 7999999999999999987 43 5666664 5777766666 321112212222222 33 8999999999999
Q ss_pred hhhhcCCCcccchhhccccccCcceEEEecChh------------------------------HHHHHHHhhhhcccccc
Q 007128 532 DIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS------------------------------VVDFVKKYLRALNWEAV 581 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~------------------------------~~~~~~~~~~~~~w~~~ 581 (617)
|+. ++..+|.|+.|+|||||.++|.+... ..++++++++..+++.+
T Consensus 123 ~~~----~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v 198 (219)
T 3dlc_A 123 FWE----DVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSY 198 (219)
T ss_dssp GCS----CHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSE
T ss_pred hcc----CHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeE
Confidence 875 78899999999999999999975321 23678899999999986
Q ss_pred cccccCCCCCCCCCCeEEEEEEec
Q 007128 582 ATTADASSDSDKDGDEVVFIVQKK 605 (617)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~l~~~K~ 605 (617)
.+.. ......+++.|+
T Consensus 199 -~~~~-------~~~~~~~~~~k~ 214 (219)
T 3dlc_A 199 -EIIL-------GDEGFWIIISKT 214 (219)
T ss_dssp -EEEE-------ETTEEEEEEBCC
T ss_pred -EEEe-------cCCceEEEEecc
Confidence 4443 123456666663
No 75
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.10 E-value=4.6e-12 Score=136.80 Aligned_cols=143 Identities=11% Similarity=0.116 Sum_probs=106.1
Q ss_pred hhhhHHHHHHHHHHHHHhhccccCccchhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecccccch---
Q 007128 432 FEKDTESWRNRVDSYWNLLSPKIQSNSLRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGLIGSI--- 507 (617)
Q Consensus 432 F~~D~~~Wk~~V~~y~~~l~~~i~~~~~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl~~~~--- 507 (617)
+......|......+.+.+-..+....-.+|||+|||+|.++..|++++. +|+.+|. +++++.|.++|+-...
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~~~~~~~~~~ 157 (416)
T 4e2x_A 81 HSSGSSVMREHFAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREKGIRVRTDFF 157 (416)
T ss_dssp CGGGCHHHHHHHHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTTTCCEECSCC
T ss_pred cCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHHHHcCCCcceeee
Confidence 33455667777776655444334444445799999999999999999887 6677774 6888888888762221
Q ss_pred -hhhhhhcccCCcchhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecChh--------------------HH
Q 007128 508 -HNWCEAYSTYPRTYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS--------------------VV 566 (617)
Q Consensus 508 -~~~~e~~~~~p~tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~--------------------~~ 566 (617)
.+-.+.++.-+++||+|++..+|.|+. ++..+|.|+.|+|||||++++..+.. ..
T Consensus 158 ~~~~~~~l~~~~~~fD~I~~~~vl~h~~----d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~ 233 (416)
T 4e2x_A 158 EKATADDVRRTEGPANVIYAANTLCHIP----YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSA 233 (416)
T ss_dssp SHHHHHHHHHHHCCEEEEEEESCGGGCT----THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCH
T ss_pred chhhHhhcccCCCCEEEEEECChHHhcC----CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCH
Confidence 122233331139999999999999987 88999999999999999999986531 24
Q ss_pred HHHHHhhhhcccccc
Q 007128 567 DFVKKYLRALNWEAV 581 (617)
Q Consensus 567 ~~~~~~~~~~~w~~~ 581 (617)
++++.++++.+++.+
T Consensus 234 ~~l~~ll~~aGf~~~ 248 (416)
T 4e2x_A 234 TSVQGMAQRCGFELV 248 (416)
T ss_dssp HHHHHHHHHTTEEEE
T ss_pred HHHHHHHHHcCCEEE
Confidence 579999999999885
No 76
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.10 E-value=5e-12 Score=129.55 Aligned_cols=132 Identities=17% Similarity=0.172 Sum_probs=84.5
Q ss_pred eeEEEeeccccccccccccc---chhhhhccCCCccchhhhHHHHH----------------hCC--------------C
Q 007128 215 LRTVLDVGCGVASFGAYLLS---SDVITMSLAPNDVHQNQIQFALE----------------RGI--------------P 261 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~---~~V~gvDis~~dl~~a~~~~a~~----------------rg~--------------~ 261 (617)
+.+|||||||+|.+...++. ..|+|+|+|+.++..++...... .+. .
T Consensus 72 ~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 151 (289)
T 2g72_A 72 GRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARV 151 (289)
T ss_dssp CSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHHE
T ss_pred CCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhhh
Confidence 46899999999995544443 25999999998887665322110 110 0
Q ss_pred cccccccccc-cCC-----CCCcccccccccccccc---ccccceEEEEecccccCCceeeecChhh---hcCCH----H
Q 007128 262 AYLGVLGTKR-LPY-----PSRSFELAHCSRCRIDW---LQRDGILLLELDRLLRPGGYFAYSSPEA---YAQDE----E 325 (617)
Q Consensus 262 ~~~~~~d~~~-lpf-----~~~sFDlV~~s~~l~h~---~~~~~~~L~el~RvLrPGG~lvis~p~~---~~~~~----~ 325 (617)
+.+..+|+.. +|+ ++++||+|+|+.++++. ..+...+|+++.|+|||||+|+++.... +.... .
T Consensus 152 ~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~ 231 (289)
T 2g72_A 152 KRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTV 231 (289)
T ss_dssp EEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEEC
T ss_pred ceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeee
Confidence 2233447766 664 44679999999885442 3345679999999999999999963111 00000 0
Q ss_pred HHHHHHHHHHHHHHhhhhhhh
Q 007128 326 DLRIWKEMSALVERMCWRIAA 346 (617)
Q Consensus 326 ~~~~w~~l~~l~~~~gf~~v~ 346 (617)
....-+++.+++++.||+++.
T Consensus 232 ~~~~~~~l~~~l~~aGf~~~~ 252 (289)
T 2g72_A 232 VPVSEEEVREALVRSGYKVRD 252 (289)
T ss_dssp CCCCHHHHHHHHHHTTEEEEE
T ss_pred ccCCHHHHHHHHHHcCCeEEE
Confidence 000016788899999997654
No 77
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.09 E-value=8.3e-12 Score=122.24 Aligned_cols=121 Identities=12% Similarity=0.182 Sum_probs=89.6
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC-CcccccccccccC--CCCCccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRLP--YPSRSFELAHCSRCR 288 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~lp--f~~~sFDlV~~s~~l 288 (617)
.+|||||||+|.++..++.. .++|+|+++.++..++. .+...++ ++.+..+|+..++ +++++||+|+++..
T Consensus 43 ~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~- 120 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALD-KVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS- 120 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHH-HHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC-
T ss_pred CeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHH-HHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC-
Confidence 58999999999999888764 59999999988887774 3444444 5788888988877 77889999998754
Q ss_pred cccccc--------cceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhhhh
Q 007128 289 IDWLQR--------DGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRIAA 346 (617)
Q Consensus 289 ~h~~~~--------~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~v~ 346 (617)
.+|... ...++.++.++|+|||++++.+... ...+.+.+.+.+.||+.+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~--------~~~~~~~~~~~~~g~~~~~ 178 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR--------GLFEYSLVSFSQYGMKLNG 178 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCH--------HHHHHHHHHHHHHTCEEEE
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCH--------HHHHHHHHHHHHCCCeeee
Confidence 233221 1358999999999999999974321 1135566777888886543
No 78
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.09 E-value=4.9e-12 Score=122.20 Aligned_cols=134 Identities=10% Similarity=0.107 Sum_probs=96.7
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc-ccchhhhhhhcccCCcchhhhhhhhhhhhhhhcC
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL-IGSIHNWCEAYSTYPRTYDLLHAWTVFSDIEKRG 537 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl-~~~~~~~~e~~~~~p~tfDlvh~~~~~~~~~~~~ 537 (617)
.+|||+|||+|.++..|++.+. .|+.+|. +.+++.+.++.- +..+..-.+.++.-+++||+|.+..++.|+. .
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~--~ 117 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASLGH---QIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMG--P 117 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHTTC---CEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCC--T
T ss_pred CeEEEecCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCC--H
Confidence 3699999999999999999876 5667774 677777776632 1111111122332238999999999999874 2
Q ss_pred CCcccchhhccccccCcceEEEecChh----------------HHHHHHHhhhhcccccccccccCCCCCCCCCCeEEEE
Q 007128 538 CSGEDLLLEMDRILRPTGFVIIRDKQS----------------VVDFVKKYLRALNWEAVATTADASSDSDKDGDEVVFI 601 (617)
Q Consensus 538 c~~~~~l~Em~RiLrPgG~~ii~~~~~----------------~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~ 601 (617)
-++..+|.++.|+|||||++++.+... ..+++++++...+|+.+ .+.. .. ..+...|.
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~-~~~~--~~---~~p~~~l~ 191 (203)
T 3h2b_A 118 GELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVT-SSHW--DP---RFPHAYLT 191 (203)
T ss_dssp TTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEE-EEEE--CT---TSSEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEE-EEEe--cC---CCcchhhh
Confidence 377899999999999999999987432 36789999999999986 4432 21 24556666
Q ss_pred EEe
Q 007128 602 VQK 604 (617)
Q Consensus 602 ~~K 604 (617)
..|
T Consensus 192 ~~~ 194 (203)
T 3h2b_A 192 AEA 194 (203)
T ss_dssp EEE
T ss_pred hhh
Confidence 555
No 79
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.09 E-value=3.2e-12 Score=124.99 Aligned_cols=96 Identities=18% Similarity=0.270 Sum_probs=73.6
Q ss_pred eeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccccc--cCCCCCccccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKR--LPYPSRSFELAHCSRCRID 290 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~--lpf~~~sFDlV~~s~~l~h 290 (617)
..+|||+|||+|.++..+++. .++++|+++.++. .+.++.. .+..+|+.. +++++++||+|++..++.|
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~-----~~~~~~~--~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~ 105 (230)
T 3cc8_A 33 WKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAE-----QAKEKLD--HVVLGDIETMDMPYEEEQFDCVIFGDVLEH 105 (230)
T ss_dssp CSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHH-----HHHTTSS--EEEESCTTTCCCCSCTTCEEEEEEESCGGG
T ss_pred CCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHH-----HHHHhCC--cEEEcchhhcCCCCCCCccCEEEECChhhh
Confidence 468999999999999888775 5788888775543 3333322 455667665 6778889999999988655
Q ss_pred cccccceEEEEecccccCCceeeecChh
Q 007128 291 WLQRDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 291 ~~~~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
+ .++..++.++.++|+|||+++++.+.
T Consensus 106 ~-~~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 106 L-FDPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp S-SCHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred c-CCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 4 44478999999999999999998654
No 80
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.09 E-value=7.3e-12 Score=123.86 Aligned_cols=141 Identities=15% Similarity=0.154 Sum_probs=97.0
Q ss_pred hhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecc----c-ccchhhhhhhcccCCcchhhhhhhh-hhh
Q 007128 459 LRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRG----L-IGSIHNWCEAYSTYPRTYDLLHAWT-VFS 531 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rg----l-~~~~~~~~e~~~~~p~tfDlvh~~~-~~~ 531 (617)
-.+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.++. + +..+..-.+.++ ++++||+|.+.. +|.
T Consensus 38 ~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~~l~ 113 (246)
T 1y8c_A 38 FDDYLDLACGTGNLTENLCPKFK---NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-INRKFDLITCCLDSTN 113 (246)
T ss_dssp TTEEEEETCTTSTTHHHHGGGSS---EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-CSCCEEEEEECTTGGG
T ss_pred CCeEEEeCCCCCHHHHHHHHCCC---cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCC-ccCCceEEEEcCcccc
Confidence 34799999999999999999876 5677774 67777766552 1 111111112222 348999999998 999
Q ss_pred hhhhcCCCcccchhhccccccCcceEEEecCh------------------------------------------------
Q 007128 532 DIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ------------------------------------------------ 563 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~------------------------------------------------ 563 (617)
|+. ..-++..+|.++.|+|||||.+++....
T Consensus 114 ~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (246)
T 1y8c_A 114 YII-DSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRDGEFYK 192 (246)
T ss_dssp GCC-SHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEECSSSEE
T ss_pred ccC-CHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEEEEecCCccc
Confidence 882 1116789999999999999999983210
Q ss_pred ----------hHHHHHHHhhhhcccccccccccC-CCCC-CCCCCeEEEEEEec
Q 007128 564 ----------SVVDFVKKYLRALNWEAVATTADA-SSDS-DKDGDEVVFIVQKK 605 (617)
Q Consensus 564 ----------~~~~~~~~~~~~~~w~~~~~~~~~-~~~~-~~~~~~~~l~~~K~ 605 (617)
-..+++++++++.+++.+ .+... ..++ .+..+..+++|+|+
T Consensus 193 ~~~~~~~~~~~~~~~l~~ll~~aGf~~~-~~~~~~~~~~~~~~~~~~~~varK~ 245 (246)
T 1y8c_A 193 RFDEEHEERAYKEEDIEKYLKHGQLNIL-DKVDCYSNKKVEKFTERITYLVKLG 245 (246)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHTTEEEE-EEEESSSSCBCCTTCSEEEEEEEEC
T ss_pred ccEEEEEEEcCCHHHHHHHHHHCCCeEE-EEEcccccCcCCCCceeEEEEEEec
Confidence 046789999999999986 44321 1111 22346678999985
No 81
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.09 E-value=2.2e-12 Score=131.02 Aligned_cols=92 Identities=16% Similarity=0.133 Sum_probs=71.3
Q ss_pred hHHHhhhcchhhHhhhcCCceEEEEeecCC-CCCceEEEeecccccchhhhhhhcccCC-cchhhhhhhhhhhhhhhcCC
Q 007128 461 NLMDMKAHLGSFAAALKEKDVWVMSVVPED-GPNTLKLIYDRGLIGSIHNWCEAYSTYP-RTYDLLHAWTVFSDIEKRGC 538 (617)
Q Consensus 461 ~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~-~~~~l~~~~~rgl~~~~~~~~e~~~~~p-~tfDlvh~~~~~~~~~~~~c 538 (617)
+|||+|||+|.++..|++++. +|+.+| ++.|++.|.++.-+...+.-.+.++ +| ++||+|.|.++|+++
T Consensus 42 ~vLDvGcGtG~~~~~l~~~~~---~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~-~~~~sfD~v~~~~~~h~~----- 112 (257)
T 4hg2_A 42 DALDCGCGSGQASLGLAEFFE---RVHAVDPGEAQIRQALRHPRVTYAVAPAEDTG-LPPASVDVAIAAQAMHWF----- 112 (257)
T ss_dssp EEEEESCTTTTTHHHHHTTCS---EEEEEESCHHHHHTCCCCTTEEEEECCTTCCC-CCSSCEEEEEECSCCTTC-----
T ss_pred CEEEEcCCCCHHHHHHHHhCC---EEEEEeCcHHhhhhhhhcCCceeehhhhhhhc-ccCCcccEEEEeeehhHh-----
Confidence 599999999999999999887 456666 3688877766543333333334544 44 999999999999755
Q ss_pred CcccchhhccccccCcceEEEec
Q 007128 539 SGEDLLLEMDRILRPTGFVIIRD 561 (617)
Q Consensus 539 ~~~~~l~Em~RiLrPgG~~ii~~ 561 (617)
+.+.++.|+.|+|||||.|++-.
T Consensus 113 ~~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 113 DLDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hHHHHHHHHHHHcCCCCEEEEEE
Confidence 57889999999999999998754
No 82
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.09 E-value=3.8e-12 Score=119.45 Aligned_cols=129 Identities=18% Similarity=0.202 Sum_probs=96.2
Q ss_pred hhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecccccchhhhhhhcccCC-cchhhhhhhhhhhhhhhc
Q 007128 459 LRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGLIGSIHNWCEAYSTYP-RTYDLLHAWTVFSDIEKR 536 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl~~~~~~~~e~~~~~p-~tfDlvh~~~~~~~~~~~ 536 (617)
-.+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.++. ..+...+.+.+ ++ ++||+|.+..++.|+.
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~--~~v~~~~~d~~-~~~~~~D~v~~~~~l~~~~-- 89 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFAT---KLYCIDINVIALKEVKEKF--DSVITLSDPKE-IPDNSVDFILFANSFHDMD-- 89 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTEE---EEEEECSCHHHHHHHHHHC--TTSEEESSGGG-SCTTCEEEEEEESCSTTCS--
T ss_pred CCeEEEECCCCCHHHHHHHhhcC---eEEEEeCCHHHHHHHHHhC--CCcEEEeCCCC-CCCCceEEEEEccchhccc--
Confidence 34699999999999999999874 7778884 67777776661 12221122222 44 8999999999999875
Q ss_pred CCCcccchhhccccccCcceEEEecChh-------------HHHHHHHhhhhcccccccccccCCCCCCCCCCeEEEEEE
Q 007128 537 GCSGEDLLLEMDRILRPTGFVIIRDKQS-------------VVDFVKKYLRALNWEAVATTADASSDSDKDGDEVVFIVQ 603 (617)
Q Consensus 537 ~c~~~~~l~Em~RiLrPgG~~ii~~~~~-------------~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~~~ 603 (617)
+...+|.|+.|+|||||++++.+... ..++++++++ +|+.+ ...+ . ....+.|++.
T Consensus 90 --~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~-~~~~--~----~~~~~~l~~~ 158 (170)
T 3i9f_A 90 --DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVE-KRFN--P----TPYHFGLVLK 158 (170)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEE-EEEC--S----STTEEEEEEE
T ss_pred --CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEE-EccC--C----CCceEEEEEe
Confidence 78899999999999999999986532 3567888888 99886 4443 2 3467888888
Q ss_pred ecc
Q 007128 604 KKI 606 (617)
Q Consensus 604 K~~ 606 (617)
|+=
T Consensus 159 ~~~ 161 (170)
T 3i9f_A 159 RKT 161 (170)
T ss_dssp ECC
T ss_pred cCC
Confidence 854
No 83
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.08 E-value=1.1e-11 Score=121.41 Aligned_cols=131 Identities=16% Similarity=0.128 Sum_probs=88.9
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhH---HHHHhCC-CcccccccccccCCCCCccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQ---FALERGI-PAYLGVLGTKRLPYPSRSFELAHCSR 286 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~---~a~~rg~-~~~~~~~d~~~lpf~~~sFDlV~~s~ 286 (617)
+.+|||||||+|.++..|++. .|+++|+++.++.....+ .+...+. ++.+.++|+..+|+++++ |.|+...
T Consensus 28 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~~ 106 (218)
T 3mq2_A 28 DDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVLM 106 (218)
T ss_dssp SEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEES
T ss_pred CCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEEc
Confidence 368999999999999998875 599999999888753211 1122333 578889999999988766 6665221
Q ss_pred ---ccc-ccccccceEEEEecccccCCceeeecChhhhcCC--H-------HHHH-HHHHHHHHHHHhhhhhhh
Q 007128 287 ---CRI-DWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQD--E-------EDLR-IWKEMSALVERMCWRIAA 346 (617)
Q Consensus 287 ---~l~-h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~--~-------~~~~-~w~~l~~l~~~~gf~~v~ 346 (617)
..+ |+..++..+++++.|+|||||+++++.....+.. + .... .-+.+..++++.||++..
T Consensus 107 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~ 180 (218)
T 3mq2_A 107 PWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLAD 180 (218)
T ss_dssp CCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEE
T ss_pred cchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCcee
Confidence 211 2455557899999999999999999632221110 0 0011 114588899999997644
No 84
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.08 E-value=6.7e-12 Score=126.61 Aligned_cols=99 Identities=20% Similarity=0.372 Sum_probs=80.5
Q ss_pred eeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWL 292 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~ 292 (617)
..+|||||||+|.++..|++. .++++|+++.++..++ ++... .+..+|+..+|+++++||+|++..+++|+.
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~-----~~~~~-~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~ 128 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAR-----EKGVK-NVVEAKAEDLPFPSGAFEAVLALGDVLSYV 128 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHH-----HHTCS-CEEECCTTSCCSCTTCEEEEEECSSHHHHC
T ss_pred CCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHH-----hhcCC-CEEECcHHHCCCCCCCEEEEEEcchhhhcc
Confidence 368999999999999998876 5888888887665544 33222 267788888999889999999988778886
Q ss_pred cccceEEEEecccccCCceeeecChhh
Q 007128 293 QRDGILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 293 ~~~~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
.+...+|+++.++|||||+++++.++.
T Consensus 129 ~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 129 ENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred ccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 666789999999999999999987664
No 85
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.08 E-value=9.5e-12 Score=118.23 Aligned_cols=120 Identities=20% Similarity=0.236 Sum_probs=89.5
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCcccccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 293 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~~ 293 (617)
.+|||+|||+|.++..+++. .++++|+++.++.. ++++..++.+...|...+++++++||+|+++...+++..
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~-----a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~ 122 (195)
T 3cgg_A 48 AKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDY-----AKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLA 122 (195)
T ss_dssp CEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHH-----HHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSC
T ss_pred CeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHH-----HHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcC
Confidence 58999999999999988875 57888887755444 444434567788888888888889999998733344442
Q ss_pred --ccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhhhh
Q 007128 294 --RDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRIAA 346 (617)
Q Consensus 294 --~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~v~ 346 (617)
+...++.++.++|+|||++++..+...... .+++.+++++.||+++.
T Consensus 123 ~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~------~~~~~~~l~~~Gf~~~~ 171 (195)
T 3cgg_A 123 EDGREPALANIHRALGADGRAVIGFGAGRGWV------FGDFLEVAERVGLELEN 171 (195)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEETTSSCC------HHHHHHHHHHHTEEEEE
T ss_pred hHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcC------HHHHHHHHHHcCCEEee
Confidence 235689999999999999999765543322 25678888999997654
No 86
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.08 E-value=6e-12 Score=124.59 Aligned_cols=101 Identities=18% Similarity=0.221 Sum_probs=79.6
Q ss_pred eEEEeecccccccccccccc-hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccccc-cccccc-
Q 007128 216 RTVLDVGCGVASFGAYLLSS-DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSR-CRIDWL- 292 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~-~l~h~~- 292 (617)
.+|||+|||+|.++..+++. .++++|+++.++..++.. +...+.++.+..+|+..++++ ++||+|+|.. ++.|..
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~ 112 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADHYEVTGVDLSEEMLEIAQEK-AMETNRHVDFWVQDMRELELP-EPVDAITILCDSLNYLQT 112 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTTSEEEEEESCHHHHHHHHHH-HHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGGGCCS
T ss_pred CeEEEecCCCCHHHHHHhhCCeEEEEECCHHHHHHHHHh-hhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCchhhcCC
Confidence 58999999999999888775 689999999888777643 333456678888898888877 7899999875 544432
Q ss_pred -cccceEEEEecccccCCceeeecChh
Q 007128 293 -QRDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 293 -~~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
.+...+++++.++|+|||++++..+.
T Consensus 113 ~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 113 EADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 33356899999999999999997544
No 87
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.08 E-value=7.6e-12 Score=123.03 Aligned_cols=120 Identities=10% Similarity=0.141 Sum_probs=87.0
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC-CcccccccccccC--CCCCccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRLP--YPSRSFELAHCSRCR 288 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~lp--f~~~sFDlV~~s~~l 288 (617)
.+|||||||+|.++..|++. .++|+|+++.++..++. .+.+.++ ++.+..+|+..++ +++++||.|++...
T Consensus 40 ~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~-~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~- 117 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQ-KVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS- 117 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHH-HHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC-
T ss_pred ceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHH-HHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC-
Confidence 57999999999999988764 58999999988887774 3444454 5788888988876 77889999986543
Q ss_pred cccccc--------cceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhhh
Q 007128 289 IDWLQR--------DGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRIA 345 (617)
Q Consensus 289 ~h~~~~--------~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~v 345 (617)
.+|... ...++.++.++|+|||.|++.+... ...+.+...+...||...
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~--------~~~~~~~~~~~~~g~~~~ 174 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNR--------GLFEYSLKSFSEYGLLLT 174 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCH--------HHHHHHHHHHHHHTCEEE
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCccc
Confidence 223221 1357899999999999999975322 112445566677777543
No 88
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.08 E-value=2e-12 Score=126.45 Aligned_cols=130 Identities=11% Similarity=0.133 Sum_probs=92.8
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecccccchhhhhhhcccC--Ccchhhhhhhhhhhhhhhc
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGLIGSIHNWCEAYSTY--PRTYDLLHAWTVFSDIEKR 536 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl~~~~~~~~e~~~~~--p~tfDlvh~~~~~~~~~~~ 536 (617)
.+|||+|||+|.++..|++++. +|+.+|. +.+++.+.++.- ..+...+.++..+ +++||+|.+..++.|+.
T Consensus 47 ~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~-~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~-- 120 (220)
T 3hnr_A 47 GNVLEFGVGTGNLTNKLLLAGR---TVYGIEPSREMRMIAKEKLP-KEFSITEGDFLSFEVPTSIDTIVSTYAFHHLT-- 120 (220)
T ss_dssp SEEEEECCTTSHHHHHHHHTTC---EEEEECSCHHHHHHHHHHSC-TTCCEESCCSSSCCCCSCCSEEEEESCGGGSC--
T ss_pred CeEEEeCCCCCHHHHHHHhCCC---eEEEEeCCHHHHHHHHHhCC-CceEEEeCChhhcCCCCCeEEEEECcchhcCC--
Confidence 4699999999999999999876 5677774 577776666522 1111112222222 38999999999999886
Q ss_pred CCCccc--chhhccccccCcceEEEecChh-------------------------------HHHHHHHhhhhcccccccc
Q 007128 537 GCSGED--LLLEMDRILRPTGFVIIRDKQS-------------------------------VVDFVKKYLRALNWEAVAT 583 (617)
Q Consensus 537 ~c~~~~--~l~Em~RiLrPgG~~ii~~~~~-------------------------------~~~~~~~~~~~~~w~~~~~ 583 (617)
+... +|.|+.|+|||||.++|.++.. ..+++++++++.+++++ .
T Consensus 121 --~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~-~ 197 (220)
T 3hnr_A 121 --DDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVT-F 197 (220)
T ss_dssp --HHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEE-E
T ss_pred --hHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEE-E
Confidence 3444 9999999999999999986431 13678899999999874 3
Q ss_pred cccCCCCCCCCCCeEEEEEEec
Q 007128 584 TADASSDSDKDGDEVVFIVQKK 605 (617)
Q Consensus 584 ~~~~~~~~~~~~~~~~l~~~K~ 605 (617)
+.. .+-..++.++|+
T Consensus 198 ~~~-------~~~~w~~~~~~~ 212 (220)
T 3hnr_A 198 TRL-------NHFVWVMEATKQ 212 (220)
T ss_dssp EEC-------SSSEEEEEEEEC
T ss_pred eec-------cceEEEEeehhh
Confidence 322 235667777774
No 89
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.08 E-value=7.8e-12 Score=125.98 Aligned_cols=134 Identities=12% Similarity=0.078 Sum_probs=96.3
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc-ccchhhhhhhcccCCcchhhhhhhh-hhhhhhhc
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL-IGSIHNWCEAYSTYPRTYDLLHAWT-VFSDIEKR 536 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl-~~~~~~~~e~~~~~p~tfDlvh~~~-~~~~~~~~ 536 (617)
.+|||+|||+|.++..|++.+. +|+.+|. +.+++.|.++.- +..+..-.+.++ ++++||+|.|.. +|.|+..
T Consensus 52 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~~l~~~~~- 126 (263)
T 3pfg_A 52 ASLLDVACGTGMHLRHLADSFG---TVEGLELSADMLAIARRRNPDAVLHHGDMRDFS-LGRRFSAVTCMFSSIGHLAG- 126 (263)
T ss_dssp CEEEEETCTTSHHHHHHTTTSS---EEEEEESCHHHHHHHHHHCTTSEEEECCTTTCC-CSCCEEEEEECTTGGGGSCH-
T ss_pred CcEEEeCCcCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhCCCCEEEECChHHCC-ccCCcCEEEEcCchhhhcCC-
Confidence 4699999999999999999876 5666674 677777766632 111111112223 259999999997 9998741
Q ss_pred CCCcccchhhccccccCcceEEEecCh-----------------------------------------------------
Q 007128 537 GCSGEDLLLEMDRILRPTGFVIIRDKQ----------------------------------------------------- 563 (617)
Q Consensus 537 ~c~~~~~l~Em~RiLrPgG~~ii~~~~----------------------------------------------------- 563 (617)
.-++..+|.++.|+|||||.++|.+..
T Consensus 127 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (263)
T 3pfg_A 127 QAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRGITHH 206 (263)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCcEEEE
Confidence 125668899999999999999996300
Q ss_pred --------hHHHHHHHhhhhcccccccccccCCCCCCCCCCeEEEEEEec
Q 007128 564 --------SVVDFVKKYLRALNWEAVATTADASSDSDKDGDEVVFIVQKK 605 (617)
Q Consensus 564 --------~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~~~K~ 605 (617)
-..+++++++++.+++.+ .+.. ......+++|+|+
T Consensus 207 ~~~~~~~~~t~~el~~ll~~aGF~v~-~~~~------~~~~~~~~va~K~ 249 (263)
T 3pfg_A 207 EESHRITLFTREQYERAFTAAGLSVE-FMPG------GPSGRGLFTGLPG 249 (263)
T ss_dssp EEEEEEECCCHHHHHHHHHHTTEEEE-EESS------TTTSSCEEEEEEC
T ss_pred EEEEEEEeecHHHHHHHHHHCCCEEE-EeeC------CCCCceeEEEecC
Confidence 026889999999999986 4442 1245678999996
No 90
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.07 E-value=8.5e-12 Score=127.40 Aligned_cols=99 Identities=14% Similarity=0.169 Sum_probs=80.6
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCcccccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 293 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~~ 293 (617)
.+|||+|||+|.++..|++. .|+++|+++.++..++. .+...++++.+..+|+..+++ +++||+|+|+.+++|...
T Consensus 122 ~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~~~ 199 (286)
T 3m70_A 122 CKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNE-TKEKENLNISTALYDINAANI-QENYDFIVSTVVFMFLNR 199 (286)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGGSCG
T ss_pred CcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHH-HHHHcCCceEEEEeccccccc-cCCccEEEEccchhhCCH
Confidence 68999999999999999876 58999999988887773 444556688888999988887 789999999987654432
Q ss_pred c-cceEEEEecccccCCceeeecC
Q 007128 294 R-DGILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 294 ~-~~~~L~el~RvLrPGG~lvis~ 316 (617)
+ ...+++++.++|+|||++++..
T Consensus 200 ~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 200 ERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp GGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 2 2369999999999999988753
No 91
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.07 E-value=1.4e-11 Score=117.04 Aligned_cols=136 Identities=15% Similarity=0.165 Sum_probs=93.0
Q ss_pred eCceeecCCCCccccCc-hhhHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc--hhhhhccCCCccchh
Q 007128 174 KGEKIIFPGGGTHFHYG-ADKYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQN 250 (617)
Q Consensus 174 ~~~~~~Fpgg~~~F~~~-a~~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a 250 (617)
.+..+.|......|... .....+.+.+.+.. . +..+|||+|||+|.++..+++. .++++|+++.++..+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------~--~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a 90 (194)
T 1dus_A 19 RGKKLKFKTDSGVFSYGKVDKGTKILVENVVV------D--KDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLA 90 (194)
T ss_dssp TTEEEEEEEETTSTTTTSCCHHHHHHHHHCCC------C--TTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHH
T ss_pred CCCceEEEeCCCcCCccccchHHHHHHHHccc------C--CCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence 34445553333344333 22444566666654 3 2368999999999999888765 589999999888777
Q ss_pred hhHHHHHhCCC---cccccccccccCCCCCccccccccccccccccccceEEEEecccccCCceeeecChhh
Q 007128 251 QIQFALERGIP---AYLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 251 ~~~~a~~rg~~---~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
+... ...++. +.+...|... ++++++||+|+++..+++.......+++++.++|+|||++++..+..
T Consensus 91 ~~~~-~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 91 KENI-KLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp HHHH-HHTTCTTSCEEEEECSTTT-TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred HHHH-HHcCCCccceEEEECchhc-ccccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 6433 333443 6777777766 44567999999877643323444578999999999999999986554
No 92
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.07 E-value=8.9e-12 Score=119.49 Aligned_cols=135 Identities=16% Similarity=0.072 Sum_probs=90.5
Q ss_pred eeecCCCCccccCchhhHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc---hhhhhccCCCccchhhhH
Q 007128 177 KIIFPGGGTHFHYGADKYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQ 253 (617)
Q Consensus 177 ~~~Fpgg~~~F~~~a~~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~ 253 (617)
.+..|. ..+........+.+.+.+... ...++.+|||+|||+|.++..++.. .|+++|+++.++..++.+
T Consensus 14 ~l~~~~--~~~rp~~~~~~~~l~~~l~~~-----~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~ 86 (189)
T 3p9n_A 14 RIAVPP--RGTRPTTDRVRESLFNIVTAR-----RDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARN 86 (189)
T ss_dssp EEECCS--CCC---CHHHHHHHHHHHHHH-----SCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHH
T ss_pred EecCCC--CCCccCcHHHHHHHHHHHHhc-----cCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHH
Confidence 344444 223344455555555555320 0112368999999999998877654 489999999888888743
Q ss_pred HHHHhCC-CcccccccccccC--CCCCccccccccccccccccccceEEEEecc--cccCCceeeecChhh
Q 007128 254 FALERGI-PAYLGVLGTKRLP--YPSRSFELAHCSRCRIDWLQRDGILLLELDR--LLRPGGYFAYSSPEA 319 (617)
Q Consensus 254 ~a~~rg~-~~~~~~~d~~~lp--f~~~sFDlV~~s~~l~h~~~~~~~~L~el~R--vLrPGG~lvis~p~~ 319 (617)
+...++ ++.+.++|+..++ +++++||+|+++....+...+...++.++.+ +|+|||++++..+..
T Consensus 87 -~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 87 -IEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp -HHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred -HHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 444444 5778888887764 4568999999876633322444668888988 999999999975443
No 93
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.06 E-value=1.2e-11 Score=123.45 Aligned_cols=101 Identities=21% Similarity=0.299 Sum_probs=79.9
Q ss_pred eeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWL 292 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~ 292 (617)
..+|||+|||+|.++..|++. .|+++|+++.++..++. .+...+.++.+..+|+..++++ ++||+|+|..+.+++.
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~-~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~ 119 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARR-KAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMYF 119 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGGS
T ss_pred CCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHH-HHHhcCCceEEEECChhhcccC-CCccEEEEcCCchhcC
Confidence 368999999999999988876 58999999988887774 3444566788888999888876 6899999864434443
Q ss_pred --cccceEEEEecccccCCceeeecCh
Q 007128 293 --QRDGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 293 --~~~~~~L~el~RvLrPGG~lvis~p 317 (617)
.+...+++++.++|+|||++++..+
T Consensus 120 ~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 120 DEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 2335689999999999999998654
No 94
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.06 E-value=3e-12 Score=123.20 Aligned_cols=102 Identities=17% Similarity=0.121 Sum_probs=77.6
Q ss_pred eEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCC--CcccccccccccC-CCCCcccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRLP-YPSRSFELAHCSRC 287 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~lp-f~~~sFDlV~~s~~ 287 (617)
.+|||+|||+|.++..+++. .|+++|+++.++..++. .+...++ ++.+..+|+..++ +.+++||+|++...
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 102 (197)
T 3eey_A 24 DTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTK-KLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLG 102 (197)
T ss_dssp CEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH-HHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEES
T ss_pred CEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCC
Confidence 58999999999999888765 58999999988887774 3444444 5778888888776 66789999998765
Q ss_pred ccccc--------cccceEEEEecccccCCceeeecChh
Q 007128 288 RIDWL--------QRDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 288 l~h~~--------~~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
++... .+...++.++.++|||||++++....
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 103 YLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp BCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 32211 11235899999999999999987543
No 95
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.06 E-value=9.8e-12 Score=128.97 Aligned_cols=104 Identities=21% Similarity=0.320 Sum_probs=80.5
Q ss_pred eeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHH-------hCCCcccccccccccC----CC--CCc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALE-------RGIPAYLGVLGTKRLP----YP--SRS 278 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~-------rg~~~~~~~~d~~~lp----f~--~~s 278 (617)
..+|||||||+|.++..+++. .++++|+++.++..++.+.... ...++.+.++|...++ ++ +++
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 114 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMC 114 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTCC
T ss_pred CCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCCC
Confidence 368999999999999888754 5899999998887777544332 1225678888888876 64 459
Q ss_pred cccccccccccccc-cc---cceEEEEecccccCCceeeecChhh
Q 007128 279 FELAHCSRCRIDWL-QR---DGILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 279 FDlV~~s~~l~h~~-~~---~~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
||+|+|+.+ +||. .+ ...+|.++.++|||||+++++.+..
T Consensus 115 fD~V~~~~~-l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 115 FDICSCQFV-CHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp EEEEEEETC-GGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred EEEEEEecc-hhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 999999887 5565 32 3479999999999999999987654
No 96
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.06 E-value=4.1e-11 Score=116.13 Aligned_cols=114 Identities=11% Similarity=0.003 Sum_probs=85.7
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC-CcccccccccccCCCCCccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRLPYPSRSFELAHCSRCRID 290 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h 290 (617)
.+|||+|||+|.++..+++. .|+++|+++.++..++... ...++ ++.+..+|........++||+|++..+..
T Consensus 42 ~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~- 119 (204)
T 3e05_A 42 LVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNL-KKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGG- 119 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHH-HHHTCTTEEEEECCTTTTCTTSCCCSEEEESCCTT-
T ss_pred CEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHH-HHhCCCcEEEEeCChhhhhhcCCCCCEEEECCCCc-
Confidence 68999999999999888765 4899999998888777433 33444 46777777755443446899999876532
Q ss_pred cccccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhh
Q 007128 291 WLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCW 342 (617)
Q Consensus 291 ~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf 342 (617)
+...++.++.++|||||++++..+.. ...+.+.+.+++.||
T Consensus 120 ---~~~~~l~~~~~~LkpgG~l~~~~~~~--------~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 120 ---MLEEIIDAVDRRLKSEGVIVLNAVTL--------DTLTKAVEFLEDHGY 160 (204)
T ss_dssp ---CHHHHHHHHHHHCCTTCEEEEEECBH--------HHHHHHHHHHHHTTC
T ss_pred ---CHHHHHHHHHHhcCCCeEEEEEeccc--------ccHHHHHHHHHHCCC
Confidence 33578999999999999999975432 124567788888898
No 97
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.06 E-value=1.1e-11 Score=122.48 Aligned_cols=112 Identities=20% Similarity=0.267 Sum_probs=84.4
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccc-cccCCC-CCcccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGT-KRLPYP-SRSFELAHCSRCRIDW 291 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~-~~lpf~-~~sFDlV~~s~~l~h~ 291 (617)
.+|||||||+|.++..|++. .|+++|+++.++..+ +++..++.+.++|. ..+|++ +++||+|+|+
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a-----~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~------ 118 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLA-----RANAPHADVYEWNGKGELPAGLGAPFGLIVSR------ 118 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHH-----HHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE------
T ss_pred CeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHH-----HHhCCCceEEEcchhhccCCcCCCCEEEEEeC------
Confidence 58999999999999999876 588888887655444 44455678888888 678888 8999999976
Q ss_pred ccccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhhhhcc
Q 007128 292 LQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRIAAKR 348 (617)
Q Consensus 292 ~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~v~~~ 348 (617)
.+...+++++.++|||||+++.. .. ... ...+.+.+.+.||+.+...
T Consensus 119 -~~~~~~l~~~~~~LkpgG~l~~~--~~-~~~------~~~~~~~l~~~Gf~~~~~~ 165 (226)
T 3m33_A 119 -RGPTSVILRLPELAAPDAHFLYV--GP-RLN------VPEVPERLAAVGWDIVAED 165 (226)
T ss_dssp -SCCSGGGGGHHHHEEEEEEEEEE--ES-SSC------CTHHHHHHHHTTCEEEEEE
T ss_pred -CCHHHHHHHHHHHcCCCcEEEEe--CC-cCC------HHHHHHHHHHCCCeEEEEE
Confidence 23467899999999999999921 11 111 1356778889999765443
No 98
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.05 E-value=6.2e-11 Score=122.30 Aligned_cols=134 Identities=15% Similarity=0.104 Sum_probs=93.1
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecc--c----ccchhhhhhhcccCC-cchhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRG--L----IGSIHNWCEAYSTYP-RTYDLLHAWTVFS 531 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rg--l----~~~~~~~~e~~~~~p-~tfDlvh~~~~~~ 531 (617)
+.|||+|||+|+|+..|++.+. ..|+.+|. ++||..+..+. + ..++.... ...+| .+||+|.|+.+|.
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~ga--~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~--~~~l~~~~fD~v~~d~sf~ 162 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQNGA--KLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAE--PVDFTEGLPSFASIDVSFI 162 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCC--GGGCTTCCCSEEEECCSSS
T ss_pred cEEEecCCCccHHHHHHHhCCC--CEEEEEECCHHHHHHHHHhCcccceecccCceecc--hhhCCCCCCCEEEEEeeHh
Confidence 4699999999999999988864 25777774 78887643321 1 11222211 12244 5699999988887
Q ss_pred hhhhcCCCcccchhhccccccCcceEEEecChh----------------------HHHHHHHhhhhcccccccccccCCC
Q 007128 532 DIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS----------------------VVDFVKKYLRALNWEAVATTADASS 589 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~----------------------~~~~~~~~~~~~~w~~~~~~~~~~~ 589 (617)
++..+|.|+.|+|||||.+++...++ ..+++..++...+|........+-.
T Consensus 163 -------sl~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi~ 235 (291)
T 3hp7_A 163 -------SLNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPIQ 235 (291)
T ss_dssp -------CGGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECSSC
T ss_pred -------hHHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
Confidence 45789999999999999998872221 5667889999999998532222222
Q ss_pred CCCCCCCeEEEEEEec
Q 007128 590 DSDKDGDEVVFIVQKK 605 (617)
Q Consensus 590 ~~~~~~~~~~l~~~K~ 605 (617)
+ .....|+++.++|.
T Consensus 236 g-~~gn~e~l~~~~~~ 250 (291)
T 3hp7_A 236 G-GHGNIEFLAHLEKT 250 (291)
T ss_dssp C-GGGCCCEEEEEEEC
T ss_pred C-CCcCHHHHHHhhhc
Confidence 2 24577899988873
No 99
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.05 E-value=8.4e-12 Score=124.52 Aligned_cols=122 Identities=16% Similarity=0.123 Sum_probs=87.4
Q ss_pred chhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc----ccchhhhhhhcccCC-cchhhhhhhhhhh
Q 007128 458 SLRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL----IGSIHNWCEAYSTYP-RTYDLLHAWTVFS 531 (617)
Q Consensus 458 ~~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl----~~~~~~~~e~~~~~p-~tfDlvh~~~~~~ 531 (617)
.-.+|||+|||+|.++..|++++. ..|+.+|. +.+++.+.++.- +-.++.-.+.++ ++ ++||+|++..++.
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~ 169 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLY--ATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETAT-LPPNTYDLIVIQWTAI 169 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHC--SEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCC-CCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCcCHHHHHHHHhhc--CEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCC-CCCCCeEEEEEcchhh
Confidence 345799999999999999988752 24666663 567766665531 111111112233 33 8999999999999
Q ss_pred hhhhcCCCcccchhhccccccCcceEEEecChh----------------HHHHHHHhhhhcccccccccc
Q 007128 532 DIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS----------------VVDFVKKYLRALNWEAVATTA 585 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~----------------~~~~~~~~~~~~~w~~~~~~~ 585 (617)
|+... ++..+|.++.|+|||||+++|.+... ..+++++++++.+|+.+ .+.
T Consensus 170 ~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~-~~~ 236 (254)
T 1xtp_A 170 YLTDA--DFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVV-KEA 236 (254)
T ss_dssp GSCHH--HHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEE-EEE
T ss_pred hCCHH--HHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEE-Eee
Confidence 88421 57899999999999999999988521 34789999999999986 443
No 100
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.04 E-value=5.1e-12 Score=128.61 Aligned_cols=98 Identities=12% Similarity=0.195 Sum_probs=74.6
Q ss_pred hHHHhhhcchhhHhhhcCC----ceEEEEeecCCC-CCceEEEeec----ccccchhhhhhhcccCC-cchhhhhhhhhh
Q 007128 461 NLMDMKAHLGSFAAALKEK----DVWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWCEAYSTYP-RTYDLLHAWTVF 530 (617)
Q Consensus 461 ~vLD~g~G~G~fa~~L~~~----~~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~e~~~~~p-~tfDlvh~~~~~ 530 (617)
+|||+|||+|.++..|+++ ++ +|+.+|. +.|++.|.++ |+...+.-.+.++..+| ..||+|.++.++
T Consensus 73 ~vLDlGcGtG~~~~~la~~~~~~~~---~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~~l 149 (261)
T 4gek_A 73 QVYDLGCSLGAATLSVRRNIHHDNC---KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFTL 149 (261)
T ss_dssp EEEEETCTTTHHHHHHHHTCCSSSC---EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEESCG
T ss_pred EEEEEeCCCCHHHHHHHHhcCCCCC---EEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeeeee
Confidence 5999999999999998764 44 5677774 6899888776 33333333445555566 789999999999
Q ss_pred hhhhhcCCCcccchhhccccccCcceEEEecCh
Q 007128 531 SDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 531 ~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
+|+... +...+|.|+.|+|||||.|++.|..
T Consensus 150 ~~~~~~--~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 150 QFLEPS--ERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp GGSCHH--HHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred eecCch--hHhHHHHHHHHHcCCCcEEEEEecc
Confidence 887522 4457899999999999999998753
No 101
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.04 E-value=1.3e-11 Score=122.77 Aligned_cols=129 Identities=15% Similarity=0.189 Sum_probs=79.7
Q ss_pred eeEEEeecccccccccccccc----hhhhhccC-CCccchh---hhHHHHHhCC-CcccccccccccCCCCCcccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLA-PNDVHQN---QIQFALERGI-PAYLGVLGTKRLPYPSRSFELAHCS 285 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis-~~dl~~a---~~~~a~~rg~-~~~~~~~d~~~lpf~~~sFDlV~~s 285 (617)
+.+|||||||+|.++..|++. .|+|+|+| +.++..| + +.+.+.++ ++.+..+|+..+|. ..||.|.+.
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~-~~~~~~~~~~v~~~~~d~~~l~~--~~~d~v~~i 101 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKII-KKPSKGGLSNVVFVIAAAESLPF--ELKNIADSI 101 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHT-SCGGGTCCSSEEEECCBTTBCCG--GGTTCEEEE
T ss_pred CCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHH-HHHHHcCCCCeEEEEcCHHHhhh--hccCeEEEE
Confidence 368999999999999998742 58999999 4444443 4 23334444 57888889888853 234544433
Q ss_pred ccccccc-------cccceEEEEecccccCCceeeec--ChhhhcCC-------HHHHHHH---HHHHHHHHHhhhhhhh
Q 007128 286 RCRIDWL-------QRDGILLLELDRLLRPGGYFAYS--SPEAYAQD-------EEDLRIW---KEMSALVERMCWRIAA 346 (617)
Q Consensus 286 ~~l~h~~-------~~~~~~L~el~RvLrPGG~lvis--~p~~~~~~-------~~~~~~w---~~l~~l~~~~gf~~v~ 346 (617)
.+.++|. .+...+|.++.|+|||||++++. ........ +.....| .++.+.++++||++..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~ 181 (225)
T 3p2e_A 102 SILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDD 181 (225)
T ss_dssp EEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEEEE
T ss_pred EEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCeee
Confidence 3322221 22345899999999999999982 11110000 0000112 3488889999997653
No 102
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.04 E-value=9.1e-12 Score=120.60 Aligned_cols=102 Identities=24% Similarity=0.337 Sum_probs=78.8
Q ss_pred eEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWL 292 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~ 292 (617)
.+|||+|||+|.++..+++. .++++|+++.++..++..... ..++.+..+|+..+++++++||+|++..++.+..
T Consensus 44 ~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~ 121 (215)
T 2pxx_A 44 DRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKLDFPSASFDVVLEKGTLDALL 121 (215)
T ss_dssp CCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSCCSCSSCEEEEEEESHHHHHT
T ss_pred CeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcCCCCCCcccEEEECcchhhhc
Confidence 58999999999999988775 588999988777666533221 2356778889888898889999999876643332
Q ss_pred --------------cccceEEEEecccccCCceeeecChhh
Q 007128 293 --------------QRDGILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 293 --------------~~~~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
.+...+++++.++|||||++++.++..
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 122 AGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp TTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 233569999999999999999986543
No 103
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.04 E-value=4.9e-12 Score=129.11 Aligned_cols=101 Identities=15% Similarity=0.152 Sum_probs=74.2
Q ss_pred chhhHHHhhhcchhhHhhhcC-CceEEEEeecCCC-CCceEEEeec----ccccchhhhhhhcccCCcchhhhhhhhhhh
Q 007128 458 SLRNLMDMKAHLGSFAAALKE-KDVWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWCEAYSTYPRTYDLLHAWTVFS 531 (617)
Q Consensus 458 ~~r~vLD~g~G~G~fa~~L~~-~~~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~e~~~~~p~tfDlvh~~~~~~ 531 (617)
.-.+|||+|||+|.++..|++ .+. +|+.+|. +.+++.+.++ |+...+...+.++..+|++||+|++..+|.
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD~v~~~~~l~ 140 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKYDV---NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIVSIGAFE 140 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEEEEESCGG
T ss_pred CcCEEEEECCcccHHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCeeEEEEeCchh
Confidence 334799999999999999984 455 5666664 5777766665 332222222333444569999999999999
Q ss_pred hhhhcCCCcccchhhccccccCcceEEEecCh
Q 007128 532 DIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
|+.. .++..+|.|+.|+|||||.+++.+..
T Consensus 141 ~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~ 170 (287)
T 1kpg_A 141 HFGH--ERYDAFFSLAHRLLPADGVMLLHTIT 170 (287)
T ss_dssp GTCT--TTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred hcCh--HHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 8832 26789999999999999999997743
No 104
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.04 E-value=5.9e-12 Score=122.54 Aligned_cols=115 Identities=18% Similarity=0.269 Sum_probs=87.1
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec-ccccchhhhhhhcccCCcchhhhhhhhhhhhhhhcC
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR-GLIGSIHNWCEAYSTYPRTYDLLHAWTVFSDIEKRG 537 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r-gl~~~~~~~~e~~~~~p~tfDlvh~~~~~~~~~~~~ 537 (617)
.+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.++ ++--...+. +.++ .+++||+|.|..++.|+...
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~~~~~~- 118 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAAGF---DVDATDGSPELAAEASRRLGRPVRTMLF-HQLD-AIDAYDAVWAHACLLHVPRD- 118 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHTSCCEECCG-GGCC-CCSCEEEEEECSCGGGSCHH-
T ss_pred CcEEEECCCCCHHHHHHHHcCC---eEEEECCCHHHHHHHHHhcCCceEEeee-ccCC-CCCcEEEEEecCchhhcCHH-
Confidence 4699999999999999999876 5666664 5777777666 321111121 2233 34999999999999987422
Q ss_pred CCcccchhhccccccCcceEEEecChh---------------HHHHHHHhhhhcc-cccc
Q 007128 538 CSGEDLLLEMDRILRPTGFVIIRDKQS---------------VVDFVKKYLRALN-WEAV 581 (617)
Q Consensus 538 c~~~~~l~Em~RiLrPgG~~ii~~~~~---------------~~~~~~~~~~~~~-w~~~ 581 (617)
++..+|.|+.|+|||||++++..... ..++++.++++.+ |+.+
T Consensus 119 -~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~ 177 (211)
T 3e23_A 119 -ELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASV 177 (211)
T ss_dssp -HHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEE
T ss_pred -HHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEE
Confidence 56789999999999999999985532 4678999999999 9986
No 105
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.04 E-value=4.4e-11 Score=112.54 Aligned_cols=115 Identities=14% Similarity=0.092 Sum_probs=80.6
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCCC--cccccccc-cccCCCCCcccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGIP--AYLGVLGT-KRLPYPSRSFELAHCSRC 287 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~~--~~~~~~d~-~~lpf~~~sFDlV~~s~~ 287 (617)
+.+|||+|||+|.++..+++. .|+++|+++.++..++. .+...+.. + +...|. ..++..+++||+|++..+
T Consensus 26 ~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~-~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~~ 103 (178)
T 3hm2_A 26 HETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILS-NAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIGGG 103 (178)
T ss_dssp TEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHH-HHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEECC-
T ss_pred CCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHH-HHHHhCCCCCE-EEecchHhhhhccCCCCCEEEECCc
Confidence 378999999999999888765 58999999988777763 33334443 4 555555 334433379999998877
Q ss_pred ccccccccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhh
Q 007128 288 RIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRI 344 (617)
Q Consensus 288 l~h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~ 344 (617)
+.+ ..+++++.++|+|||++++...... ....+...++..+++.
T Consensus 104 ~~~-----~~~l~~~~~~L~~gG~l~~~~~~~~--------~~~~~~~~~~~~~~~~ 147 (178)
T 3hm2_A 104 LTA-----PGVFAAAWKRLPVGGRLVANAVTVE--------SEQMLWALRKQFGGTI 147 (178)
T ss_dssp TTC-----TTHHHHHHHTCCTTCEEEEEECSHH--------HHHHHHHHHHHHCCEE
T ss_pred ccH-----HHHHHHHHHhcCCCCEEEEEeeccc--------cHHHHHHHHHHcCCee
Confidence 433 4689999999999999999754331 1245566667776543
No 106
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.04 E-value=7e-12 Score=124.74 Aligned_cols=115 Identities=16% Similarity=0.236 Sum_probs=85.6
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecccccchh-hhhhhcccCC-cchhhhhhhhhhhhhhhc
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGLIGSIH-NWCEAYSTYP-RTYDLLHAWTVFSDIEKR 536 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl~~~~~-~~~e~~~~~p-~tfDlvh~~~~~~~~~~~ 536 (617)
.+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.++ + ..+. +..+....++ ++||+|++..++.|+...
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~-~-~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~~ 117 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEEGI---ESIGVDINEDMIKFCEGK-F-NVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDPE 117 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHHTC---CEEEECSCHHHHHHHHTT-S-EEECSCHHHHHHTSCTTCBSEEEEESCGGGSCGG
T ss_pred CeEEEEeCCCCHHHHHHHhCCC---cEEEEECCHHHHHHHHhh-c-ceeeccHHHHhhhcCCCCeeEEEECCchhhCCcH
Confidence 4699999999999999998877 5666774 5777777666 2 2111 2212122344 999999999999988522
Q ss_pred CCCcccchhhccccccCcceEEEecChh-------------------HHHHHHHhhhhcccccc
Q 007128 537 GCSGEDLLLEMDRILRPTGFVIIRDKQS-------------------VVDFVKKYLRALNWEAV 581 (617)
Q Consensus 537 ~c~~~~~l~Em~RiLrPgG~~ii~~~~~-------------------~~~~~~~~~~~~~w~~~ 581 (617)
++..+|.++.|+|||||++++..+.. ..++++.++++.+++.+
T Consensus 118 --~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~ 179 (240)
T 3dli_A 118 --RLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDV 179 (240)
T ss_dssp --GHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEE
T ss_pred --HHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEE
Confidence 45899999999999999999987542 23578888888888875
No 107
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.03 E-value=6.1e-12 Score=124.37 Aligned_cols=94 Identities=22% Similarity=0.296 Sum_probs=70.7
Q ss_pred hHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc--ccchhhhhhhcccCCcchhhhhhhhhhhhhhhcC
Q 007128 461 NLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL--IGSIHNWCEAYSTYPRTYDLLHAWTVFSDIEKRG 537 (617)
Q Consensus 461 ~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl--~~~~~~~~e~~~~~p~tfDlvh~~~~~~~~~~~~ 537 (617)
+|||+|||+|.++..|++.+. +|+.+|. +.+++.|.++.- +..++.-.+.+ ..+++||+|++..++.|+.
T Consensus 45 ~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~--- 117 (250)
T 2p7i_A 45 NLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHID--- 117 (250)
T ss_dssp CEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGCS---
T ss_pred cEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhhc---
Confidence 599999999999999999876 5666664 567666655521 11111111222 1249999999999999886
Q ss_pred CCcccchhhcc-ccccCcceEEEecC
Q 007128 538 CSGEDLLLEMD-RILRPTGFVIIRDK 562 (617)
Q Consensus 538 c~~~~~l~Em~-RiLrPgG~~ii~~~ 562 (617)
++..+|.|+. |+|||||+++|.++
T Consensus 118 -~~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 118 -DPVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp -SHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred -CHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 7789999999 99999999999874
No 108
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.03 E-value=1.8e-11 Score=120.75 Aligned_cols=98 Identities=18% Similarity=0.244 Sum_probs=75.2
Q ss_pred eeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWL 292 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~ 292 (617)
..+|||||||+|.++..|++. .++++|+++.++..+ +++..++.+..+|+..+++ +++||+|+|+...+++.
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a-----~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~ 114 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHA-----RKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYL 114 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHH-----HHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGC
T ss_pred CCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHH-----HHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhc
Confidence 368999999999999998876 488888887665544 3443457788888888887 67999999765334444
Q ss_pred ---cccceEEEEecccccCCceeeecChh
Q 007128 293 ---QRDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 293 ---~~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
.+...+|+++.++|+|||+++++.+.
T Consensus 115 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (239)
T 3bxo_A 115 KTTEELGAAVASFAEHLEPGGVVVVEPWW 143 (239)
T ss_dssp CSHHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEecc
Confidence 33356999999999999999998543
No 109
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.03 E-value=4.3e-12 Score=125.72 Aligned_cols=115 Identities=14% Similarity=0.099 Sum_probs=85.8
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecccccchhhhh---hhcccCCcchhhhhhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGLIGSIHNWC---EAYSTYPRTYDLLHAWTVFSDIEK 535 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl~~~~~~~~---e~~~~~p~tfDlvh~~~~~~~~~~ 535 (617)
.+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.+++....++..+ +.++.-+++||+|++..++.|+.
T Consensus 55 ~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~- 130 (242)
T 3l8d_A 55 AEVLDVGCGDGYGTYKLSRTGY---KAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTE- 130 (242)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSS-
T ss_pred CeEEEEcCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhcc-
Confidence 3699999999999999999877 4556663 57777777664211122111 22331138999999999999886
Q ss_pred cCCCcccchhhccccccCcceEEEecChh----------------------HHHHHHHhhhhcccccc
Q 007128 536 RGCSGEDLLLEMDRILRPTGFVIIRDKQS----------------------VVDFVKKYLRALNWEAV 581 (617)
Q Consensus 536 ~~c~~~~~l~Em~RiLrPgG~~ii~~~~~----------------------~~~~~~~~~~~~~w~~~ 581 (617)
+...+|.++.|+|||||.++|.+... ..++++.+++..+|+.+
T Consensus 131 ---~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 195 (242)
T 3l8d_A 131 ---EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVV 195 (242)
T ss_dssp ---CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEE
T ss_pred ---CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEE
Confidence 77899999999999999999987321 23578899999999886
No 110
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.03 E-value=4.5e-11 Score=116.75 Aligned_cols=115 Identities=14% Similarity=0.016 Sum_probs=85.1
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCC--cccccccccccCCCCCcccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIP--AYLGVLGTKRLPYPSRSFELAHCSRCRIDW 291 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~--~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~ 291 (617)
.+|||+|||+|.++..+++. .|+++|+++.++..++. .+...+++ +.+..+|+........+||+|++..++
T Consensus 57 ~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~-~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~--- 132 (204)
T 3njr_A 57 ELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQK-NIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGG--- 132 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCC---
T ss_pred CEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHH-HHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcc---
Confidence 68999999999999888765 58999999988877773 44444554 778888877733333579999976532
Q ss_pred ccccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhhh
Q 007128 292 LQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRIA 345 (617)
Q Consensus 292 ~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~v 345 (617)
+.. ++.++.++|||||+++++.... ....++.+.+++.||++.
T Consensus 133 --~~~-~l~~~~~~LkpgG~lv~~~~~~--------~~~~~~~~~l~~~g~~i~ 175 (204)
T 3njr_A 133 --SQA-LYDRLWEWLAPGTRIVANAVTL--------ESETLLTQLHARHGGQLL 175 (204)
T ss_dssp --CHH-HHHHHHHHSCTTCEEEEEECSH--------HHHHHHHHHHHHHCSEEE
T ss_pred --cHH-HHHHHHHhcCCCcEEEEEecCc--------ccHHHHHHHHHhCCCcEE
Confidence 234 8999999999999999975432 123566677788786543
No 111
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.02 E-value=2e-11 Score=129.80 Aligned_cols=129 Identities=11% Similarity=0.080 Sum_probs=91.0
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC--Cccccccccccc--CCCCCcccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRL--PYPSRSFELAHCSRC 287 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~l--pf~~~sFDlV~~s~~ 287 (617)
.+|||||||+|.++..++++ .++++|+ +.++..++. .+.+.++ ++.+..+|+... |++ ++||+|++..+
T Consensus 181 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~v 257 (363)
T 3dp7_A 181 KRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRK-QTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQF 257 (363)
T ss_dssp SEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHH-HHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEESC
T ss_pred CEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHH-HHHhcCcccceEEEEccccccCCCCC-CCcCEEEEech
Confidence 68999999999999988764 4888998 767666653 3333343 477888888775 566 78999999998
Q ss_pred cccccccc-ceEEEEecccccCCceeeecChhhhcCCHHH-------H--------------HHHHHHHHHHHHhhhhhh
Q 007128 288 RIDWLQRD-GILLLELDRLLRPGGYFAYSSPEAYAQDEED-------L--------------RIWKEMSALVERMCWRIA 345 (617)
Q Consensus 288 l~h~~~~~-~~~L~el~RvLrPGG~lvis~p~~~~~~~~~-------~--------------~~w~~l~~l~~~~gf~~v 345 (617)
+++|.++. ..+|+++.++|||||++++..+......... . ...+++.++++++||+.+
T Consensus 258 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~~v 337 (363)
T 3dp7_A 258 LDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLEVE 337 (363)
T ss_dssp STTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEEES
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCeEE
Confidence 77776542 4689999999999999998643222111000 0 012667788888888765
Q ss_pred hc
Q 007128 346 AK 347 (617)
Q Consensus 346 ~~ 347 (617)
..
T Consensus 338 ~~ 339 (363)
T 3dp7_A 338 EI 339 (363)
T ss_dssp CC
T ss_pred EE
Confidence 54
No 112
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.02 E-value=1.1e-11 Score=125.77 Aligned_cols=143 Identities=8% Similarity=0.015 Sum_probs=93.8
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecc-----cc-------------c---------------
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRG-----LI-------------G--------------- 505 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rg-----l~-------------~--------------- 505 (617)
.+|||+|||+|.++..++..++. +|+.+|. ++|++.|.++. .+ |
T Consensus 57 ~~vLDiGCG~G~~~~~~~~~~~~--~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (263)
T 2a14_A 57 DTLIDIGSGPTIYQVLAACDSFQ--DITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAA 134 (263)
T ss_dssp EEEEESSCTTCCGGGTTGGGTEE--EEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHH
T ss_pred ceEEEeCCCccHHHHHHHHhhhc--ceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhh
Confidence 46999999999999888887762 6888884 67777665421 00 0
Q ss_pred ---c-hhhhhh--hcccC-CcchhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecChh--------------
Q 007128 506 ---S-IHNWCE--AYSTY-PRTYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS-------------- 564 (617)
Q Consensus 506 ---~-~~~~~e--~~~~~-p~tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~-------------- 564 (617)
. ..|..+ ++... ..+||+|.|..+++|+..+.-++..+|.+|.|+|||||+|++++...
T Consensus 135 i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~ 214 (263)
T 2a14_A 135 VKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCV 214 (263)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECC
T ss_pred hheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeecc
Confidence 0 011111 12111 26999999999999863222356789999999999999999996321
Q ss_pred --HHHHHHHhhhhcccccccccccCC--CC-C-CCCCCeEEEEEEec
Q 007128 565 --VVDFVKKYLRALNWEAVATTADAS--SD-S-DKDGDEVVFIVQKK 605 (617)
Q Consensus 565 --~~~~~~~~~~~~~w~~~~~~~~~~--~~-~-~~~~~~~~l~~~K~ 605 (617)
..+++.+++...+++.+ .+.... .. . .......+++|+|+
T Consensus 215 ~~~~~~l~~~l~~aGF~i~-~~~~~~~~~~~~~~~~~~~~~~~a~K~ 260 (263)
T 2a14_A 215 ALEKGEVEQAVLDAGFDIE-QLLHSPQSYSVTNAANNGVCCIVARKK 260 (263)
T ss_dssp CCCHHHHHHHHHHTTEEEE-EEEEECCCCCTTTCCCCCEEEEEEEEC
T ss_pred ccCHHHHHHHHHHCCCEEE-EEeecccccccccCCCCceEEEEEEec
Confidence 35678999998888875 332210 10 0 11235668899995
No 113
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.02 E-value=1.4e-10 Score=112.99 Aligned_cols=149 Identities=15% Similarity=0.173 Sum_probs=99.5
Q ss_pred hhhhhhhHHHHHHHHHHHHHhh------------ccccCccchhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCce
Q 007128 429 SEMFEKDTESWRNRVDSYWNLL------------SPKIQSNSLRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTL 495 (617)
Q Consensus 429 ~e~F~~D~~~Wk~~V~~y~~~l------------~~~i~~~~~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l 495 (617)
.+.|..++..|......|.... ........-.+|||+|||+|.++..|+. +|+.+|. +..+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~------~v~~~D~s~~~~ 99 (215)
T 2zfu_A 26 QRLFQEDPEAFLLYHRGFQSQVKKWPLQPVDRIARDLRQRPASLVVADFGCGDCRLASSIRN------PVHCFDLASLDP 99 (215)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHTSCTTSCEEEETCTTCHHHHHCCS------CEEEEESSCSST
T ss_pred HHHHHHhHHHHHHHHHHHHhhhcccchhHHHHHHHHHhccCCCCeEEEECCcCCHHHHHhhc------cEEEEeCCCCCc
Confidence 4567888888887666665421 1111112334699999999999999952 3344442 2211
Q ss_pred EEEeecccccchhhhhhhcccCC-cchhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecChh---HHHHHHH
Q 007128 496 KLIYDRGLIGSIHNWCEAYSTYP-RTYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS---VVDFVKK 571 (617)
Q Consensus 496 ~~~~~rgl~~~~~~~~e~~~~~p-~tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~---~~~~~~~ 571 (617)
.+. .+... .++ ++ ++||+|.+..+++ .. ++..+|.|+.|+|||||.++|.+... ..+++.+
T Consensus 100 ~~~-----~~d~~----~~~-~~~~~fD~v~~~~~l~-~~----~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~ 164 (215)
T 2zfu_A 100 RVT-----VCDMA----QVP-LEDESVDVAVFCLSLM-GT----NIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLR 164 (215)
T ss_dssp TEE-----ESCTT----SCS-CCTTCEEEEEEESCCC-SS----CHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHH
T ss_pred eEE-----Eeccc----cCC-CCCCCEeEEEEehhcc-cc----CHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHH
Confidence 111 12222 222 33 8999999988885 22 78899999999999999999987665 5678999
Q ss_pred hhhhcccccccccccCCCCCCCCCCeEEEEEEec
Q 007128 572 YLRALNWEAVATTADASSDSDKDGDEVVFIVQKK 605 (617)
Q Consensus 572 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~~~K~ 605 (617)
+++..+++.+ .... . ...-.+++++|.
T Consensus 165 ~l~~~Gf~~~-~~~~---~---~~~~~~~~~~k~ 191 (215)
T 2zfu_A 165 AVTKLGFKIV-SKDL---T---NSHFFLFDFQKT 191 (215)
T ss_dssp HHHHTTEEEE-EEEC---C---STTCEEEEEEEC
T ss_pred HHHHCCCEEE-EEec---C---CCeEEEEEEEec
Confidence 9999999985 3321 1 334578888885
No 114
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.02 E-value=1.5e-11 Score=122.99 Aligned_cols=126 Identities=13% Similarity=0.120 Sum_probs=90.5
Q ss_pred cCccchhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc---ccchhhhhhhcccCCcchhhhhhhhh
Q 007128 454 IQSNSLRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL---IGSIHNWCEAYSTYPRTYDLLHAWTV 529 (617)
Q Consensus 454 i~~~~~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl---~~~~~~~~e~~~~~p~tfDlvh~~~~ 529 (617)
+....-.+|||+|||+|.++..|++.+.. +|+.+|. +.+++.+.++.- +-.+..-.+.++.-+++||+|+|..+
T Consensus 40 ~~~~~~~~vLD~GcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 117 (253)
T 3g5l_A 40 LPDFNQKTVLDLGCGFGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLA 117 (253)
T ss_dssp CCCCTTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESC
T ss_pred hhccCCCEEEEECCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchh
Confidence 33334457999999999999999988652 4566663 567766665532 11111111233321389999999999
Q ss_pred hhhhhhcCCCcccchhhccccccCcceEEEecChh---------------------------------------------
Q 007128 530 FSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS--------------------------------------------- 564 (617)
Q Consensus 530 ~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~--------------------------------------------- 564 (617)
+.|+. ++..+|.++.|+|||||.+++.....
T Consensus 118 l~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (253)
T 3g5l_A 118 LHYIA----SFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYH 193 (253)
T ss_dssp GGGCS----CHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEEC
T ss_pred hhhhh----hHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEe
Confidence 99885 78999999999999999999973221
Q ss_pred -HHHHHHHhhhhccccccccccc
Q 007128 565 -VVDFVKKYLRALNWEAVATTAD 586 (617)
Q Consensus 565 -~~~~~~~~~~~~~w~~~~~~~~ 586 (617)
..+++.+++++.+++.+ .+.+
T Consensus 194 ~t~~~~~~~l~~aGF~~~-~~~e 215 (253)
T 3g5l_A 194 RTVTTYIQTLLKNGFQIN-SVIE 215 (253)
T ss_dssp CCHHHHHHHHHHTTEEEE-EEEC
T ss_pred cCHHHHHHHHHHcCCeee-eeec
Confidence 45789999999999986 5554
No 115
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.01 E-value=1.9e-11 Score=119.93 Aligned_cols=141 Identities=18% Similarity=0.220 Sum_probs=94.7
Q ss_pred ChhhhhhhHHHHHHHHH----HHHHhhccccCccchhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecc
Q 007128 428 SSEMFEKDTESWRNRVD----SYWNLLSPKIQSNSLRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRG 502 (617)
Q Consensus 428 ~~e~F~~D~~~Wk~~V~----~y~~~l~~~i~~~~~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rg 502 (617)
+.+.|....+.|..+.. .|...+..+.....-.+|||+|||+|.++..|+.. +.+|. +.+++.+.+++
T Consensus 13 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~~ 85 (219)
T 1vlm_A 13 MWHIFERFVNEYERWFLVHRFAYLSELQAVKCLLPEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKRG 85 (219)
T ss_dssp TTHHHHHTHHHHHHHHHHTHHHHHHHHHHHHHHCCSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHTT
T ss_pred heeecchhHHHHHHHHHhcchhHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhcC
Confidence 35666666777766544 23332221000111347999999999999999986 33342 46666666654
Q ss_pred cccchhhhhhhcccCC-cchhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecChh-----------------
Q 007128 503 LIGSIHNWCEAYSTYP-RTYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS----------------- 564 (617)
Q Consensus 503 l~~~~~~~~e~~~~~p-~tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~----------------- 564 (617)
+--...+ .+.++ ++ ++||+|++..++.|+. ++..+|.++.|+|||||.+++.+...
T Consensus 86 ~~~~~~d-~~~~~-~~~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~ 159 (219)
T 1vlm_A 86 VFVLKGT-AENLP-LKDESFDFALMVTTICFVD----DPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVF 159 (219)
T ss_dssp CEEEECB-TTBCC-SCTTCEEEEEEESCGGGSS----CHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CC
T ss_pred CEEEEcc-cccCC-CCCCCeeEEEEcchHhhcc----CHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcch
Confidence 3111111 12233 33 7999999999999876 77899999999999999999985431
Q ss_pred -------HHHHHHHhhhhcccccc
Q 007128 565 -------VVDFVKKYLRALNWEAV 581 (617)
Q Consensus 565 -------~~~~~~~~~~~~~w~~~ 581 (617)
..+++++++++.+++.+
T Consensus 160 ~~~~~~~~~~~l~~~l~~~Gf~~~ 183 (219)
T 1vlm_A 160 YKNARFFSTEELMDLMRKAGFEEF 183 (219)
T ss_dssp STTCCCCCHHHHHHHHHHTTCEEE
T ss_pred hcccccCCHHHHHHHHHHCCCeEE
Confidence 34678899999999875
No 116
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.01 E-value=1.9e-11 Score=122.01 Aligned_cols=119 Identities=11% Similarity=0.079 Sum_probs=87.6
Q ss_pred eeEEEeeccccccccccccc----chhhhhccCCCccchhhhHHHHHhCC-CcccccccccccCCC---CCccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLS----SDVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRLPYP---SRSFELAHCSR 286 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~----~~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~lpf~---~~sFDlV~~s~ 286 (617)
..+|||||||+|.++..|+. ..|+++|+++.++..++. .+...++ ++.+..+|+..++++ +++||+|+|..
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEK-LSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARA 149 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHH-HHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEEC
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCCEEEEeccHHHhcccccccCCccEEEEec
Confidence 46899999999999888873 259999999988887773 4444455 578888888888764 67999999764
Q ss_pred cccccccccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhhh
Q 007128 287 CRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRIA 345 (617)
Q Consensus 287 ~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~v 345 (617)
. .+...++.++.++|+|||++++..... .. ....++.+.++..||+..
T Consensus 150 ~-----~~~~~~l~~~~~~LkpgG~l~~~~g~~---~~---~~~~~~~~~l~~~g~~~~ 197 (240)
T 1xdz_A 150 V-----ARLSVLSELCLPLVKKNGLFVALKAAS---AE---EELNAGKKAITTLGGELE 197 (240)
T ss_dssp C-----SCHHHHHHHHGGGEEEEEEEEEEECC----CH---HHHHHHHHHHHHTTEEEE
T ss_pred c-----CCHHHHHHHHHHhcCCCCEEEEEeCCC---ch---HHHHHHHHHHHHcCCeEe
Confidence 2 334578999999999999999852111 11 113556677788888654
No 117
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.00 E-value=1.5e-10 Score=119.47 Aligned_cols=123 Identities=12% Similarity=0.135 Sum_probs=78.8
Q ss_pred eeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHH---hCCCcccccccccccCCCCCccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALE---RGIPAYLGVLGTKRLPYPSRSFELAHCSRCR 288 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~---rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l 288 (617)
+.+|||||||||.++..|++. .|+|+|+++.|++.+..+..+. ...++. ......+ +..+||+|+|..++
T Consensus 86 g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~--~l~~~~l--~~~~fD~v~~d~sf 161 (291)
T 3hp7_A 86 DMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFR--YAEPVDF--TEGLPSFASIDVSF 161 (291)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGG--GCCGGGC--TTCCCSEEEECCSS
T ss_pred ccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCcccceecccCce--ecchhhC--CCCCCCEEEEEeeH
Confidence 368999999999999888765 5999999999987643211100 011111 1122223 34469999987664
Q ss_pred cccccccceEEEEecccccCCceeeecChhhhcC------------CHH-HHHHHHHHHHHHHHhhhhhh
Q 007128 289 IDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQ------------DEE-DLRIWKEMSALVERMCWRIA 345 (617)
Q Consensus 289 ~h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~------------~~~-~~~~w~~l~~l~~~~gf~~v 345 (617)
++ ...+|.++.|+|||||.+++...+.+.. ++. ....-+++..++..+||.+.
T Consensus 162 ~s----l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~ 227 (291)
T 3hp7_A 162 IS----LNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVK 227 (291)
T ss_dssp SC----GGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred hh----HHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEE
Confidence 32 2568999999999999998862221110 111 11222778888889999643
No 118
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.00 E-value=6.2e-11 Score=115.13 Aligned_cols=110 Identities=15% Similarity=0.102 Sum_probs=81.4
Q ss_pred hHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCC-Ccccccccc
Q 007128 193 KYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGT 269 (617)
Q Consensus 193 ~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~ 269 (617)
.....+.+.+.. .. +.+|||+|||+|.++..|++. .|+++|+++.++..++.... ..++ ++.+..+|.
T Consensus 64 ~~~~~~~~~l~~------~~--~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~v~~~~~d~ 134 (210)
T 3lbf_A 64 YMVARMTELLEL------TP--QSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLK-NLDLHNVSTRHGDG 134 (210)
T ss_dssp HHHHHHHHHTTC------CT--TCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHH-HTTCCSEEEEESCG
T ss_pred HHHHHHHHhcCC------CC--CCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHH-HcCCCceEEEECCc
Confidence 334555566554 32 368999999999999988875 58999999988877764333 3333 477888888
Q ss_pred cccCCCCCccccccccccccccccccceEEEEecccccCCceeeecChh
Q 007128 270 KRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 270 ~~lpf~~~sFDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
...+.++++||+|++..++.+.. .++.++|||||+++++.+.
T Consensus 135 ~~~~~~~~~~D~i~~~~~~~~~~-------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 135 WQGWQARAPFDAIIVTAAPPEIP-------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GGCCGGGCCEEEEEESSBCSSCC-------THHHHTEEEEEEEEEEECS
T ss_pred ccCCccCCCccEEEEccchhhhh-------HHHHHhcccCcEEEEEEcC
Confidence 77766678999999987654433 2589999999999997654
No 119
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.00 E-value=2.6e-11 Score=119.22 Aligned_cols=97 Identities=11% Similarity=0.038 Sum_probs=69.4
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCCCccccccccccc----CCCCCccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRL----PYPSRSFELAHCSR 286 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~l----pf~~~sFDlV~~s~ 286 (617)
+.+|||+|||+|.++..|++. .|+|+|+++.++.... +.++++ .++.+..+|.... ++. ++||+|+|+.
T Consensus 58 g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~-~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~~ 134 (210)
T 1nt2_A 58 DERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLL-ELVRER-NNIIPLLFDASKPWKYSGIV-EKVDLIYQDI 134 (210)
T ss_dssp SCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHH-HHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEEEEECC
T ss_pred CCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHH-HHHhcC-CCeEEEEcCCCCchhhcccc-cceeEEEEec
Confidence 468999999999998887763 5899999997765433 344433 3556666676653 455 7899999862
Q ss_pred cccccccccceEEEEecccccCCceeeecCh
Q 007128 287 CRIDWLQRDGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 287 ~l~h~~~~~~~~L~el~RvLrPGG~lvis~p 317 (617)
. . ......++.++.|+|||||+|+++.+
T Consensus 135 ~-~--~~~~~~~l~~~~r~LkpgG~l~i~~~ 162 (210)
T 1nt2_A 135 A-Q--KNQIEILKANAEFFLKEKGEVVIMVK 162 (210)
T ss_dssp C-S--TTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c-C--hhHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 1 1 12223358999999999999999853
No 120
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.00 E-value=1.1e-11 Score=122.59 Aligned_cols=101 Identities=15% Similarity=0.186 Sum_probs=77.9
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC-Cccccccccccc-C--CCCCccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRL-P--YPSRSFELAHCSR 286 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~l-p--f~~~sFDlV~~s~ 286 (617)
..+|||||||+|.++..|++. .|+|+|+++.++..++. .+.+.++ ++.+..+|+..+ + +++++||.|++.+
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~-~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLA-SAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHH-HHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHH-HHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 358999999999999998864 49999999998888774 4444454 578888888774 4 7889999999764
Q ss_pred cccccccccc--------eEEEEecccccCCceeeecCh
Q 007128 287 CRIDWLQRDG--------ILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 287 ~l~h~~~~~~--------~~L~el~RvLrPGG~lvis~p 317 (617)
. .+|..... .++.++.|+|||||+|++++.
T Consensus 114 ~-~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 114 P-DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp C-CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred C-CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 3 33432211 389999999999999999754
No 121
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.00 E-value=1.6e-11 Score=121.97 Aligned_cols=97 Identities=15% Similarity=0.141 Sum_probs=78.4
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCC--CcccccccccccCCCCCcccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRLPYPSRSFELAHCSRCRIDW 291 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~ 291 (617)
.+|||+|||+|.++..+++. .|+++|+++.++..++. .+...++ ++.+.++|+..++ ++++||+|+++..+ ++
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~-~~ 156 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARN-NAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPW-GG 156 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCC-SS
T ss_pred CEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHH-HHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCc-CC
Confidence 68999999999999999876 58999999988887773 4444555 5788888988877 56799999988764 44
Q ss_pred ccccceEEEEecccccCCceeeec
Q 007128 292 LQRDGILLLELDRLLRPGGYFAYS 315 (617)
Q Consensus 292 ~~~~~~~L~el~RvLrPGG~lvis 315 (617)
.......+.++.++|+|||++++.
T Consensus 157 ~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 157 PDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp GGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred cchhhhHHHHHHhhcCCcceeHHH
Confidence 455456888999999999998875
No 122
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.99 E-value=3.2e-11 Score=116.56 Aligned_cols=120 Identities=13% Similarity=-0.005 Sum_probs=71.3
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCC-----Ccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPS-----RSFELAHCS 285 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~-----~sFDlV~~s 285 (617)
..+|||+|||+|.++..+++. .++++|+++.++..++... ...+.++.+.++|+.. ++++ ++||+|+|+
T Consensus 31 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~~~~d~~~-~~~~~~~~~~~fD~i~~n 108 (215)
T 4dzr_A 31 GTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNA-ERFGAVVDWAAADGIE-WLIERAERGRPWHAIVSN 108 (215)
T ss_dssp TEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------CCHHHHHH-HHHHHHHTTCCBSEEEEC
T ss_pred CCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHH-HHhCCceEEEEcchHh-hhhhhhhccCcccEEEEC
Confidence 479999999999999888875 5899999999988877433 3334467777788766 5555 899999986
Q ss_pred ccccccc------ccc-------------------ceEEEEecccccCCce-eeecChhhhcCCHHHHHHHHHHHHHHH-
Q 007128 286 RCRIDWL------QRD-------------------GILLLELDRLLRPGGY-FAYSSPEAYAQDEEDLRIWKEMSALVE- 338 (617)
Q Consensus 286 ~~l~h~~------~~~-------------------~~~L~el~RvLrPGG~-lvis~p~~~~~~~~~~~~w~~l~~l~~- 338 (617)
...++.. ... ..+++++.++|||||+ +++..+.. . .+.+.++++
T Consensus 109 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---~------~~~~~~~l~~ 179 (215)
T 4dzr_A 109 PPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHN---Q------ADEVARLFAP 179 (215)
T ss_dssp CCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTS---C------HHHHHHHTGG
T ss_pred CCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCc---c------HHHHHHHHHH
Confidence 4322111 000 3467889999999999 66654311 1 245677777
Q ss_pred -Hhhhhhh
Q 007128 339 -RMCWRIA 345 (617)
Q Consensus 339 -~~gf~~v 345 (617)
+.||..+
T Consensus 180 ~~~gf~~~ 187 (215)
T 4dzr_A 180 WRERGFRV 187 (215)
T ss_dssp GGGGTEEC
T ss_pred hhcCCceE
Confidence 7887543
No 123
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.98 E-value=4e-11 Score=118.21 Aligned_cols=122 Identities=14% Similarity=0.075 Sum_probs=88.3
Q ss_pred eeEEEeeccc-ccccccccccc---hhhhhccCCCccchhhhHHHHHhCCCccccccccccc-CCCCCcccccccccccc
Q 007128 215 LRTVLDVGCG-VASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRL-PYPSRSFELAHCSRCRI 289 (617)
Q Consensus 215 ~~~VLDVGCG-~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~l-pf~~~sFDlV~~s~~l~ 289 (617)
+.+|||+||| +|.++..++.. .|+++|+++.++..++. .+...++++.+..+|...+ ++++++||+|+++...+
T Consensus 56 ~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~~ 134 (230)
T 3evz_A 56 GEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARR-NIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPYY 134 (230)
T ss_dssp SCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHH-HHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCCC
T ss_pred CCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHH-HHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCCc
Confidence 3689999999 99999888775 58999999988887773 4445566788888886433 56678999999875432
Q ss_pred cccc------------------ccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhh
Q 007128 290 DWLQ------------------RDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRI 344 (617)
Q Consensus 290 h~~~------------------~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~ 344 (617)
+... ....++.++.++|||||++++..+... ...+++.+.+++.||+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-------~~~~~~~~~l~~~g~~~ 200 (230)
T 3evz_A 135 DKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE-------KLLNVIKERGIKLGYSV 200 (230)
T ss_dssp ---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH-------HHHHHHHHHHHHTTCEE
T ss_pred CCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH-------hHHHHHHHHHHHcCCce
Confidence 2111 013578899999999999999654321 12356778888889854
No 124
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.98 E-value=1.9e-11 Score=124.40 Aligned_cols=96 Identities=14% Similarity=0.052 Sum_probs=70.3
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCC-----CCCccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPY-----PSRSFELAHCSRCR 288 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf-----~~~sFDlV~~s~~l 288 (617)
.+|||||||+|.++..|+++ .|+++|+|+.|+..++.+... . +...+...++. .+++||+|+|+.++
T Consensus 47 ~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~-~-----~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l 120 (261)
T 3iv6_A 47 STVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALAD-R-----CVTIDLLDITAEIPKELAGHFDFVLNDRLI 120 (261)
T ss_dssp CEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSS-S-----CCEEEECCTTSCCCGGGTTCCSEEEEESCG
T ss_pred CEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHh-c-----cceeeeeecccccccccCCCccEEEEhhhh
Confidence 68999999999999999876 589999998887766532221 1 22233333332 25689999999886
Q ss_pred ccccc-ccceEEEEecccccCCceeeecChh
Q 007128 289 IDWLQ-RDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 289 ~h~~~-~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
+|+.. +...++.++.++| |||+++++.+.
T Consensus 121 ~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 121 NRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp GGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred HhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 66543 3345899999999 99999998654
No 125
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.98 E-value=1.2e-11 Score=123.05 Aligned_cols=122 Identities=16% Similarity=0.180 Sum_probs=86.2
Q ss_pred hhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc------ccchhhhhhhcccCCcchhhhhhhhhhh
Q 007128 459 LRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL------IGSIHNWCEAYSTYPRTYDLLHAWTVFS 531 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl------~~~~~~~~e~~~~~p~tfDlvh~~~~~~ 531 (617)
-.+|||+|||+|.++..|++.+. ..|+.+|. +.+++.+.++.- +-.+..-.+.++.-+++||+|.+..++.
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLF--REVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTC--SEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCEEEEECCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 45799999999999999998752 25666664 567766655531 1111111122232126899999999999
Q ss_pred hhhhcCCCcccchhhccccccCcceEEEecChh---------------HHHHHHHhhhhcccccccccc
Q 007128 532 DIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS---------------VVDFVKKYLRALNWEAVATTA 585 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~---------------~~~~~~~~~~~~~w~~~~~~~ 585 (617)
|+... ....+|.++.|+|||||+++|.+... ..++++++++..+|+.+ ...
T Consensus 158 ~~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~-~~~ 223 (241)
T 2ex4_A 158 HLTDQ--HLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLL-AEE 223 (241)
T ss_dssp GSCHH--HHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEE-EEE
T ss_pred hCCHH--HHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEE-Eee
Confidence 87622 24589999999999999999977421 46789999999999986 443
No 126
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.98 E-value=1.1e-11 Score=124.28 Aligned_cols=117 Identities=21% Similarity=0.258 Sum_probs=83.7
Q ss_pred chhhHHHhhhcchhhHhhhcCC-ceEEEEeecCCC-CCceEEEeeccc----ccchh-hhhhhcccCC-cchhhhhhhhh
Q 007128 458 SLRNLMDMKAHLGSFAAALKEK-DVWVMSVVPEDG-PNTLKLIYDRGL----IGSIH-NWCEAYSTYP-RTYDLLHAWTV 529 (617)
Q Consensus 458 ~~r~vLD~g~G~G~fa~~L~~~-~~~v~~v~~~~~-~~~l~~~~~rgl----~~~~~-~~~e~~~~~p-~tfDlvh~~~~ 529 (617)
.-.+|||+|||+|.++..|++. +. .|+.+|. +.+++.+.++.- +-.++ +. +.++ ++ ++||+|++..+
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~-~~~~-~~~~~fD~v~~~~~ 129 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKYGA---HTHGIDICSNIVNMANERVSGNNKIIFEANDI-LTKE-FPENNFDLIYSRDA 129 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHTCCSCTTEEEEECCT-TTCC-CCTTCEEEEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHhhcCCCeEEEECcc-ccCC-CCCCcEEEEeHHHH
Confidence 3446999999999999999986 55 5666663 567766666532 11111 22 2222 33 99999999999
Q ss_pred hhhhhhcCCCcccchhhccccccCcceEEEecChh----------------------HHHHHHHhhhhcccccc
Q 007128 530 FSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS----------------------VVDFVKKYLRALNWEAV 581 (617)
Q Consensus 530 ~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~----------------------~~~~~~~~~~~~~w~~~ 581 (617)
+.|+.. .++..+|.|+.|+|||||.+++.+... ..+++.++++..+++.+
T Consensus 130 l~~~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 201 (266)
T 3ujc_A 130 ILALSL--ENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNV 201 (266)
T ss_dssp GGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEE
T ss_pred HHhcCh--HHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEE
Confidence 998821 177899999999999999999987421 24567777888787764
No 127
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.98 E-value=2e-11 Score=120.84 Aligned_cols=97 Identities=18% Similarity=0.187 Sum_probs=70.0
Q ss_pred chhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc---ccchhhhhhhcccCC-cchhhhhhhhhhhh
Q 007128 458 SLRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL---IGSIHNWCEAYSTYP-RTYDLLHAWTVFSD 532 (617)
Q Consensus 458 ~~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl---~~~~~~~~e~~~~~p-~tfDlvh~~~~~~~ 532 (617)
.-.+|||+|||+|.++..|++.+.. +|+.+|. +.+++.+.++.- +..++.-.+.++ ++ ++||+|++..++.|
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~ 119 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGAS--YVLGLDLSEKMLARARAAGPDTGITYERADLDKLH-LPQDSFDLAYSSLALHY 119 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCC-CCTTCEEEEEEESCGGG
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCC--eEEEEcCCHHHHHHHHHhcccCCceEEEcChhhcc-CCCCCceEEEEeccccc
Confidence 3457999999999999999988651 3455553 466666655532 111111112233 33 89999999999998
Q ss_pred hhhcCCCcccchhhccccccCcceEEEec
Q 007128 533 IEKRGCSGEDLLLEMDRILRPTGFVIIRD 561 (617)
Q Consensus 533 ~~~~~c~~~~~l~Em~RiLrPgG~~ii~~ 561 (617)
+. ++..+|.++.|+|||||.+++..
T Consensus 120 ~~----~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 120 VE----DVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp CS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cc----hHHHHHHHHHHhcCcCcEEEEEe
Confidence 76 78899999999999999999975
No 128
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.98 E-value=2.9e-11 Score=120.96 Aligned_cols=126 Identities=10% Similarity=0.099 Sum_probs=84.9
Q ss_pred CceeEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCCCccccccc---ccccCCCCCccccccc
Q 007128 213 GRLRTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLG---TKRLPYPSRSFELAHC 284 (617)
Q Consensus 213 ~~~~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d---~~~lpf~~~sFDlV~~ 284 (617)
.++.+|||+|||+|.++..|++. .|+++|+++.++..+.. .+.+++ ++.....| ....++..+++|+|++
T Consensus 76 kpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~-~a~~~~-ni~~V~~d~~~p~~~~~~~~~vDvVf~ 153 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLT-VVRDRR-NIFPILGDARFPEKYRHLVEGVDGLYA 153 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHH-HSTTCT-TEEEEESCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHH-hhHhhc-CeeEEEEeccCccccccccceEEEEEE
Confidence 34579999999999999999874 48999999988877653 333332 33333333 3456677789999986
Q ss_pred cccccccccccceEEEEecccccCCceeeecChhh----hcCCHHHHHHHHHHHHHHHHhhhhhhh
Q 007128 285 SRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEA----YAQDEEDLRIWKEMSALVERMCWRIAA 346 (617)
Q Consensus 285 s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~~----~~~~~~~~~~w~~l~~l~~~~gf~~v~ 346 (617)
.. ++..+...++.++.|+|||||+++++.... ..... ..+.+..+.+++.||+.+.
T Consensus 154 d~---~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~---~~~~~ev~~L~~~GF~l~e 213 (233)
T 4df3_A 154 DV---AQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPS---EVYKREIKTLMDGGLEIKD 213 (233)
T ss_dssp CC---CCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCC---HHHHHHHHHHHHTTCCEEE
T ss_pred ec---cCChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChH---HHHHHHHHHHHHCCCEEEE
Confidence 53 233444568999999999999999863111 11111 1234445667788997654
No 129
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.98 E-value=1.4e-11 Score=123.20 Aligned_cols=115 Identities=12% Similarity=0.098 Sum_probs=83.0
Q ss_pred hhhHHHhhhcchhhHhhhcCC-ceEEEEeecCCC-CCceEEEeec----ccccchhhhh---hhcccCCcchhhhhhhhh
Q 007128 459 LRNLMDMKAHLGSFAAALKEK-DVWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWC---EAYSTYPRTYDLLHAWTV 529 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~-~~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~---e~~~~~p~tfDlvh~~~~ 529 (617)
-.+|||+|||+|.++..|++. +. +|+.+|. +.+++.+.++ |+-..+...+ +.++. +++||+|+|..+
T Consensus 37 ~~~VLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~~~~~ 112 (256)
T 1nkv_A 37 GTRILDLGSGSGEMLCTWARDHGI---TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVAACVGA 112 (256)
T ss_dssp TCEEEEETCTTCHHHHHHHHHTCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEEEEESC
T ss_pred CCEEEEECCCCCHHHHHHHHhcCC---eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEEEECCC
Confidence 347999999999999999875 54 4566664 5777666554 3311121111 22232 589999999999
Q ss_pred hhhhhhcCCCcccchhhccccccCcceEEEecChh----------------------HHHHHHHhhhhcccccc
Q 007128 530 FSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS----------------------VVDFVKKYLRALNWEAV 581 (617)
Q Consensus 530 ~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~----------------------~~~~~~~~~~~~~w~~~ 581 (617)
+.|+. ++..+|.|+.|+|||||++++.++.. ..+++.+++...+++.+
T Consensus 113 ~~~~~----~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 182 (256)
T 1nkv_A 113 TWIAG----GFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVV 182 (256)
T ss_dssp GGGTS----SSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCC
T ss_pred hHhcC----CHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCeeE
Confidence 98775 78999999999999999999987421 23567888888888775
No 130
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.98 E-value=2.9e-11 Score=119.67 Aligned_cols=116 Identities=19% Similarity=0.134 Sum_probs=87.4
Q ss_pred hHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecc----cccchhhhhhhcccC--Ccchhhhhhhhhhhhh
Q 007128 461 NLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRG----LIGSIHNWCEAYSTY--PRTYDLLHAWTVFSDI 533 (617)
Q Consensus 461 ~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rg----l~~~~~~~~e~~~~~--p~tfDlvh~~~~~~~~ 533 (617)
+|||+|||+|.++..|++.+. .|+.+|. +.+++.+.++. ....+...+.++..+ +.+||+|.+..+|.|+
T Consensus 69 ~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 145 (235)
T 3lcc_A 69 RALVPGCGGGHDVVAMASPER---FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCAI 145 (235)
T ss_dssp EEEEETCTTCHHHHHHCBTTE---EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTTS
T ss_pred CEEEeCCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhcC
Confidence 799999999999999999877 5677774 67777766653 222223223333333 2799999999999977
Q ss_pred hhcCCCcccchhhccccccCcceEEEecChh-----------HHHHHHHhhhhcccccc
Q 007128 534 EKRGCSGEDLLLEMDRILRPTGFVIIRDKQS-----------VVDFVKKYLRALNWEAV 581 (617)
Q Consensus 534 ~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~-----------~~~~~~~~~~~~~w~~~ 581 (617)
.. .+...+|.++.|+|||||++++.+... ..++++++++..+|+.+
T Consensus 146 ~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 202 (235)
T 3lcc_A 146 EP--EMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAV 202 (235)
T ss_dssp CG--GGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEE
T ss_pred CH--HHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEE
Confidence 42 256789999999999999999865422 36789999999999986
No 131
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.97 E-value=3.1e-11 Score=126.38 Aligned_cols=129 Identities=21% Similarity=0.196 Sum_probs=90.9
Q ss_pred ceeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC--CcccccccccccCCCCCcccccccccc
Q 007128 214 RLRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRLPYPSRSFELAHCSRC 287 (617)
Q Consensus 214 ~~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~lpf~~~sFDlV~~s~~ 287 (617)
...+|||||||+|.++..+++. .++++|+ +.++..++.. ..+.++ .+.+..+|+. .+++. +||+|++.++
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~v 244 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRR-FLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAV 244 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHH-HHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESC
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHh-hhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehh
Confidence 3479999999999999888764 4788888 7777666633 333343 4778888876 46665 8999999999
Q ss_pred ccccccc-cceEEEEecccccCCceeeecChhhhcCCH-HH--HH----------HHHHHHHHHHHhhhhhhh
Q 007128 288 RIDWLQR-DGILLLELDRLLRPGGYFAYSSPEAYAQDE-ED--LR----------IWKEMSALVERMCWRIAA 346 (617)
Q Consensus 288 l~h~~~~-~~~~L~el~RvLrPGG~lvis~p~~~~~~~-~~--~~----------~w~~l~~l~~~~gf~~v~ 346 (617)
+++|.++ ...+|+++.++|+|||++++..+......+ .. .. ..+++.++++++||+.+.
T Consensus 245 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 317 (332)
T 3i53_A 245 LHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRA 317 (332)
T ss_dssp GGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEE
T ss_pred hccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEE
Confidence 7777654 256999999999999999986432211100 00 00 016788899999997654
No 132
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.97 E-value=1.1e-11 Score=121.09 Aligned_cols=131 Identities=14% Similarity=0.132 Sum_probs=94.8
Q ss_pred hhHHHhhhcchhhHhhhcCCc---eEEEEeecCCC-CCceEEEeecc----c--ccchhhhhhhcccCC-cchhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKD---VWVMSVVPEDG-PNTLKLIYDRG----L--IGSIHNWCEAYSTYP-RTYDLLHAWT 528 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~---~~v~~v~~~~~-~~~l~~~~~rg----l--~~~~~~~~e~~~~~p-~tfDlvh~~~ 528 (617)
.+|||+|||+|.++..|++.. . .|+.+|. +.+++.+.++. + +-.+..-.+.++ ++ ++||+|.+..
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~ 114 (219)
T 3dh0_A 39 MTVLDVGTGAGFYLPYLSKMVGEKG---KVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIP-LPDNTVDFIFMAF 114 (219)
T ss_dssp CEEEESSCTTCTTHHHHHHHHTTTC---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCS-SCSSCEEEEEEES
T ss_pred CEEEEEecCCCHHHHHHHHHhCCCc---EEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCC-CCCCCeeEEEeeh
Confidence 479999999999999998865 4 4556663 56666665552 1 111111112222 33 8999999999
Q ss_pred hhhhhhhcCCCcccchhhccccccCcceEEEecChh-------------HHHHHHHhhhhcccccccccccCCCCCCCCC
Q 007128 529 VFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS-------------VVDFVKKYLRALNWEAVATTADASSDSDKDG 595 (617)
Q Consensus 529 ~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~-------------~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 595 (617)
++.|+. +...+|.|+.|+|||||.+++.+... ..+++..+++..+|+.+ ...+ . ..
T Consensus 115 ~l~~~~----~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~-~~~~--~----~~ 183 (219)
T 3dh0_A 115 TFHELS----EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVG-RVVE--V----GK 183 (219)
T ss_dssp CGGGCS----SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEE-EEEE--E----TT
T ss_pred hhhhcC----CHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEE-EEEe--e----CC
Confidence 999886 77899999999999999999986321 35789999999999986 4443 2 33
Q ss_pred CeEEEEEEec
Q 007128 596 DEVVFIVQKK 605 (617)
Q Consensus 596 ~~~~l~~~K~ 605 (617)
...+++++|+
T Consensus 184 ~~~~~~~~k~ 193 (219)
T 3dh0_A 184 YCFGVYAMIV 193 (219)
T ss_dssp TEEEEEEECC
T ss_pred ceEEEEEEec
Confidence 6788888885
No 133
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.97 E-value=8e-11 Score=110.77 Aligned_cols=131 Identities=14% Similarity=0.093 Sum_probs=93.6
Q ss_pred hhHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCC-Cccccccc
Q 007128 192 DKYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLG 268 (617)
Q Consensus 192 ~~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d 268 (617)
....+.+.+.+.. ..+ .+|||+|||+|.++..+++. .++++|+++.++..++.. ....++ ++.+..+|
T Consensus 21 ~~~~~~~~~~~~~------~~~--~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~~~~~~d 91 (183)
T 2yxd_A 21 EEIRAVSIGKLNL------NKD--DVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQN-LAKFNIKNCQIIKGR 91 (183)
T ss_dssp HHHHHHHHHHHCC------CTT--CEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHH-HHHTTCCSEEEEESC
T ss_pred HHHHHHHHHHcCC------CCC--CEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHH-HHHcCCCcEEEEECC
Confidence 4445556666654 333 58999999999999888764 589999999888777643 333443 56777778
Q ss_pred ccccCCCCCccccccccccccccccccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhhhhc
Q 007128 269 TKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRIAAK 347 (617)
Q Consensus 269 ~~~lpf~~~sFDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~v~~ 347 (617)
... ++++++||+|++..+ .+...++.++.++ |||++++..+... ...++.+.+++.||++...
T Consensus 92 ~~~-~~~~~~~D~i~~~~~-----~~~~~~l~~~~~~--~gG~l~~~~~~~~--------~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 92 AED-VLDKLEFNKAFIGGT-----KNIEKIIEILDKK--KINHIVANTIVLE--------NAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp HHH-HGGGCCCSEEEECSC-----SCHHHHHHHHHHT--TCCEEEEEESCHH--------HHHHHHHHHHHTTCEEEEE
T ss_pred ccc-cccCCCCcEEEECCc-----ccHHHHHHHHhhC--CCCEEEEEecccc--------cHHHHHHHHHHcCCeEEEE
Confidence 766 667789999998865 3335678888888 9999999764331 1356777888888765443
No 134
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.97 E-value=1.1e-10 Score=119.52 Aligned_cols=121 Identities=8% Similarity=0.070 Sum_probs=89.6
Q ss_pred eEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCCC--cccccccccccCCCCCccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGIP--AYLGVLGTKRLPYPSRSFELAHCSRCRID 290 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~~--~~~~~~d~~~lpf~~~sFDlV~~s~~l~h 290 (617)
.+|||+|||+|.++..++.. .|+++|+++.+++.++. .+...++. +.+..+|+..++. +++||+|++...
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~-n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p--- 201 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVE-NIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV--- 201 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHH-HHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC---
T ss_pred CEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc---
Confidence 68999999999999999875 39999999988888774 44445554 6688889888876 689999987532
Q ss_pred cccccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhhh
Q 007128 291 WLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRIA 345 (617)
Q Consensus 291 ~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~v 345 (617)
.....++.++.++|||||++++........... ...+.+.+.+++.||+..
T Consensus 202 --~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~--~~~~~i~~~~~~~G~~~~ 252 (278)
T 2frn_A 202 --VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPR--EPFETFKRITKEYGYDVE 252 (278)
T ss_dssp --SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTT--TTHHHHHHHHHHTTCEEE
T ss_pred --hhHHHHHHHHHHHCCCCeEEEEEEeeccccccc--cHHHHHHHHHHHcCCeeE
Confidence 222468889999999999999976543211111 113567888888898654
No 135
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.97 E-value=8.1e-11 Score=125.34 Aligned_cols=128 Identities=16% Similarity=0.163 Sum_probs=90.8
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC--CcccccccccccCCCCCccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRLPYPSRSFELAHCSRCR 288 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~lpf~~~sFDlV~~s~~l 288 (617)
..+|||||||+|.++..++++ .++++|+ +.++..++... .+.++ .+.+..+|+. .+++. .||+|++.+++
T Consensus 203 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~-~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~vl 278 (369)
T 3gwz_A 203 AATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELL-TGRGLADRCEILPGDFF-ETIPD-GADVYLIKHVL 278 (369)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHH-HHTTCTTTEEEEECCTT-TCCCS-SCSEEEEESCG
T ss_pred CcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhh-hhcCcCCceEEeccCCC-CCCCC-CceEEEhhhhh
Confidence 468999999999999988875 4788898 77777666433 33333 4778888877 56665 89999999997
Q ss_pred ccccccc-ceEEEEecccccCCceeeecChhhhcCCHH---HHH------------HHHHHHHHHHHhhhhhhh
Q 007128 289 IDWLQRD-GILLLELDRLLRPGGYFAYSSPEAYAQDEE---DLR------------IWKEMSALVERMCWRIAA 346 (617)
Q Consensus 289 ~h~~~~~-~~~L~el~RvLrPGG~lvis~p~~~~~~~~---~~~------------~w~~l~~l~~~~gf~~v~ 346 (617)
++|.++. ..+|+++.++|+|||++++..+........ ... ..+++.++++++||+.+.
T Consensus 279 h~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~ 352 (369)
T 3gwz_A 279 HDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVER 352 (369)
T ss_dssp GGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEE
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEE
Confidence 6665442 269999999999999999964332211100 000 016788888889987654
No 136
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.96 E-value=6.5e-11 Score=115.77 Aligned_cols=141 Identities=11% Similarity=0.112 Sum_probs=92.6
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecc----ccc----chhhhhhhcccC---Ccchhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRG----LIG----SIHNWCEAYSTY---PRTYDLLHAW 527 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rg----l~~----~~~~~~e~~~~~---p~tfDlvh~~ 527 (617)
.+|||+|||+|.++..|++.+-. .+|+.+|. +.+++.+.++- +-. .+.-.+.++... +++||+|.|.
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~ 109 (219)
T 3jwg_A 31 KKVIDLGCGEGNLLSLLLKDKSF-EQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATVI 109 (219)
T ss_dssp CEEEEETCTTCHHHHHHHTSTTC-CEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEEE
T ss_pred CEEEEecCCCCHHHHHHHhcCCC-CEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEEH
Confidence 47999999999999999987510 15666663 57777666552 100 111111222222 2799999999
Q ss_pred hhhhhhhhcCCCcccchhhccccccCcceEEEecChh----------------------HHHHHH----Hhhhhcccccc
Q 007128 528 TVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS----------------------VVDFVK----KYLRALNWEAV 581 (617)
Q Consensus 528 ~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~----------------------~~~~~~----~~~~~~~w~~~ 581 (617)
.++.|+... ++..+|.++.|+|||||.+++..... ..++++ .++.+.+|++
T Consensus 110 ~~l~~~~~~--~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v- 186 (219)
T 3jwg_A 110 EVIEHLDEN--RLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSV- 186 (219)
T ss_dssp SCGGGCCHH--HHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEE-
T ss_pred HHHHhCCHH--HHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEE-
Confidence 999988522 34689999999999999887765432 123444 8888889987
Q ss_pred ccccc-CCCCCCCCCCeEEEEEEec
Q 007128 582 ATTAD-ASSDSDKDGDEVVFIVQKK 605 (617)
Q Consensus 582 ~~~~~-~~~~~~~~~~~~~l~~~K~ 605 (617)
.... ....+.-.....+.|++|.
T Consensus 187 -~~~~~g~~~~~~g~~~qi~~~~~~ 210 (219)
T 3jwg_A 187 -RFLQIGEIDDEFGSPTQMGVFTLG 210 (219)
T ss_dssp -EEEEESCCCTTSCCSEEEEEEEEC
T ss_pred -EEEecCCccccCCCCeEEEEEecc
Confidence 3331 0022234567899999985
No 137
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.96 E-value=4.8e-11 Score=126.37 Aligned_cols=99 Identities=14% Similarity=0.175 Sum_probs=78.0
Q ss_pred eEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCCC--cccccccccccCCCCCccccccccccc--
Q 007128 216 RTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGIP--AYLGVLGTKRLPYPSRSFELAHCSRCR-- 288 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~~--~~~~~~d~~~lpf~~~sFDlV~~s~~l-- 288 (617)
.+|||||||+|.++..+++. .|+|+|+++ ++..++ +.+...++. +.+..+|+..+++++++||+|++..+.
T Consensus 68 ~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~-~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~~ 145 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAV-KIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYC 145 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHH-HHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBBT
T ss_pred CEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHH-HHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccccc
Confidence 58999999999999988876 599999995 777776 445555554 788899999999998999999986432
Q ss_pred cccccccceEEEEecccccCCceeeecC
Q 007128 289 IDWLQRDGILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 289 ~h~~~~~~~~L~el~RvLrPGG~lvis~ 316 (617)
+++......++.++.|+|||||+++...
T Consensus 146 l~~~~~~~~~l~~~~r~LkpgG~li~~~ 173 (349)
T 3q7e_A 146 LFYESMLNTVLHARDKWLAPDGLIFPDR 173 (349)
T ss_dssp BTBTCCHHHHHHHHHHHEEEEEEEESCE
T ss_pred ccCchhHHHHHHHHHHhCCCCCEEcccc
Confidence 2223344568888999999999998653
No 138
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.96 E-value=2e-11 Score=121.57 Aligned_cols=99 Identities=12% Similarity=0.035 Sum_probs=74.3
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCC-----Cccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPS-----RSFELAHCSRCR 288 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~-----~sFDlV~~s~~l 288 (617)
.+|||||||+|.++..|++. .|+++|+++.++..++.+. ...++.+.++|+..+++.. ..||+|++..++
T Consensus 58 ~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~ 134 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKEN---TAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGF 134 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHS---CCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSS
T ss_pred CeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhC---cccCceEEECcccccccccccccccCccEEEEcchh
Confidence 58999999999999999876 5899999887776655322 1235777888887765432 249999988775
Q ss_pred ccccc-ccceEEEEecccccCCceeeecCh
Q 007128 289 IDWLQ-RDGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 289 ~h~~~-~~~~~L~el~RvLrPGG~lvis~p 317 (617)
+|... +...+++++.++|||||++++..+
T Consensus 135 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 135 HHIPVEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp TTSCGGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 44431 335799999999999999888754
No 139
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.96 E-value=1.4e-10 Score=121.31 Aligned_cols=128 Identities=15% Similarity=0.056 Sum_probs=90.3
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHh-CCCcccccccccccCCCCCccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALER-GIPAYLGVLGTKRLPYPSRSFELAHCSRCRID 290 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~r-g~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h 290 (617)
.+|||||||+|.++..++++ .++++|+ +.++..++....... ...+.+..+|... +++ ++||+|++..++++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~~ 245 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIGD 245 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESCGGG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchhccC
Confidence 68999999999999888764 4889999 888877764433221 2347777788766 566 67999999999777
Q ss_pred ccccc-ceEEEEecccccCCceeeecChhhhcC-CHHHHH---------------HHHHHHHHHHHhhhhhhh
Q 007128 291 WLQRD-GILLLELDRLLRPGGYFAYSSPEAYAQ-DEEDLR---------------IWKEMSALVERMCWRIAA 346 (617)
Q Consensus 291 ~~~~~-~~~L~el~RvLrPGG~lvis~p~~~~~-~~~~~~---------------~w~~l~~l~~~~gf~~v~ 346 (617)
|.++. ..+++++.++|+|||++++..+..... .+.... .-+++.++++++||+.+.
T Consensus 246 ~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 318 (334)
T 2ip2_A 246 LDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVER 318 (334)
T ss_dssp CCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeE
Confidence 75442 379999999999999999974322110 000000 015678888888886543
No 140
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.95 E-value=6.6e-11 Score=122.17 Aligned_cols=95 Identities=11% Similarity=0.132 Sum_probs=73.5
Q ss_pred eeEEEeecccccccccccc----cchhhhhccCCCccchhhhHHHHHhCC-CcccccccccccCCCCCcccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLL----SSDVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRLPYPSRSFELAHCSRCRI 289 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~----~~~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~lpf~~~sFDlV~~s~~l~ 289 (617)
+.+|||||||+|.++..++ ...|+++|+++.+++.|+... .+.++ ++.+.++|+..+| +++||+|++...
T Consensus 123 g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~-~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a~-- 197 (298)
T 3fpf_A 123 GERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVI-EGLGVDGVNVITGDETVID--GLEFDVLMVAAL-- 197 (298)
T ss_dssp TCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHH-HHHTCCSEEEEESCGGGGG--GCCCSEEEECTT--
T ss_pred cCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHH-HhcCCCCeEEEECchhhCC--CCCcCEEEECCC--
Confidence 4799999999997764432 236999999999998888544 34444 5788888888876 689999986533
Q ss_pred ccccccceEEEEecccccCCceeeecC
Q 007128 290 DWLQRDGILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 290 h~~~~~~~~L~el~RvLrPGG~lvis~ 316 (617)
..+...+++++.|+|||||++++..
T Consensus 198 --~~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 198 --AEPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp --CSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred --ccCHHHHHHHHHHHcCCCcEEEEEc
Confidence 2444579999999999999999864
No 141
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.95 E-value=1e-10 Score=118.12 Aligned_cols=92 Identities=22% Similarity=0.394 Sum_probs=73.7
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRID 290 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h 290 (617)
..+|||||||+|.++..+++. .|+++|+++.++ +.++++..++.+...|...+|+++++||+|++..+
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~-----~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~--- 157 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAI-----KAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYA--- 157 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHH-----HHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESC---
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHH-----HHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCC---
Confidence 368999999999999888764 478888877554 44555555677888899899999899999997543
Q ss_pred cccccceEEEEecccccCCceeeecChhh
Q 007128 291 WLQRDGILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 291 ~~~~~~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
...+.++.|+|||||++++.++..
T Consensus 158 -----~~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 158 -----PCKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp -----CCCHHHHHHHEEEEEEEEEEEECT
T ss_pred -----hhhHHHHHHhcCCCcEEEEEEcCH
Confidence 246899999999999999987654
No 142
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.95 E-value=2.5e-10 Score=114.11 Aligned_cols=131 Identities=17% Similarity=0.139 Sum_probs=86.3
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc-c-----cchhhhh-hhccc--CC-cchhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL-I-----GSIHNWC-EAYST--YP-RTYDLLHAWT 528 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl-~-----~~~~~~~-e~~~~--~p-~tfDlvh~~~ 528 (617)
.+|||+|||+|.|+..|++++.. .|+.+|. ++|++.+..+.- + ..+...+ ++++. ++ .+||++.+
T Consensus 39 ~~VLDiGcGtG~~t~~la~~g~~--~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~-- 114 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQNGAK--LVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFI-- 114 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCS--EEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSS--
T ss_pred CEEEEEccCCCHHHHHHHhcCCC--EEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhh--
Confidence 36999999999999999988742 5777774 788887655321 1 1222222 33332 23 56666654
Q ss_pred hhhhhhhcCCCcccchhhccccccCcceEEEecCh----------------------hHHHHHHHhhhhccccccccccc
Q 007128 529 VFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ----------------------SVVDFVKKYLRALNWEAVATTAD 586 (617)
Q Consensus 529 ~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~----------------------~~~~~~~~~~~~~~w~~~~~~~~ 586 (617)
.+..+|.|+.|+|||||.+++...+ ...+++.+++.+.+|+.+.....
T Consensus 115 ----------~l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~ 184 (232)
T 3opn_A 115 ----------SLDLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFS 184 (232)
T ss_dssp ----------CGGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEEC
T ss_pred ----------hHHHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEc
Confidence 2367999999999999999986211 14557889999999998522222
Q ss_pred CCCCCCCCCCeEEEEEEec
Q 007128 587 ASSDSDKDGDEVVFIVQKK 605 (617)
Q Consensus 587 ~~~~~~~~~~~~~l~~~K~ 605 (617)
+-.+ .....|+++.++|.
T Consensus 185 pi~g-~~gn~e~l~~~~~~ 202 (232)
T 3opn_A 185 PIKG-GAGNVEFLVHLLKD 202 (232)
T ss_dssp SSCB-TTTBCCEEEEEEES
T ss_pred cCCC-CCCCHHHHHHHhhc
Confidence 1111 23467888888883
No 143
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.95 E-value=2.3e-11 Score=124.16 Aligned_cols=115 Identities=17% Similarity=0.222 Sum_probs=85.5
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc---ccchhhhhhhcccC-Ccchhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL---IGSIHNWCEAYSTY-PRTYDLLHAWTVF 530 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl---~~~~~~~~e~~~~~-p~tfDlvh~~~~~ 530 (617)
.+|||+|||+|.++..|++.+. .|+.+|. +.+++.+.++ |+ +..++.-.+.++.+ +++||+|+|..++
T Consensus 70 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 70 LRVLDAGGGEGQTAIKMAERGH---QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVL 146 (285)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCG
T ss_pred CEEEEeCCcchHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchh
Confidence 4699999999999999999877 4556663 5777766655 33 11222212333423 3999999999999
Q ss_pred hhhhhcCCCcccchhhccccccCcceEEEecChh----------------------------------HHHHHHHhhhhc
Q 007128 531 SDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS----------------------------------VVDFVKKYLRAL 576 (617)
Q Consensus 531 ~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~----------------------------------~~~~~~~~~~~~ 576 (617)
.|+. ++..+|.|+.|+|||||+++|.+... ..++++.+++..
T Consensus 147 ~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a 222 (285)
T 4htf_A 147 EWVA----DPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEA 222 (285)
T ss_dssp GGCS----CHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHT
T ss_pred hccc----CHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHC
Confidence 9886 77899999999999999999987532 135788888888
Q ss_pred ccccc
Q 007128 577 NWEAV 581 (617)
Q Consensus 577 ~w~~~ 581 (617)
+|+.+
T Consensus 223 Gf~v~ 227 (285)
T 4htf_A 223 GWQIM 227 (285)
T ss_dssp TCEEE
T ss_pred CCcee
Confidence 88864
No 144
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.95 E-value=1.9e-11 Score=120.73 Aligned_cols=137 Identities=20% Similarity=0.216 Sum_probs=91.5
Q ss_pred hhHHHhhhcchhhHhhhcCC--ceEEEEeecCCC-CCceEEEeeccc-ccchhhhhhhcccC--Ccchhhhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDG-PNTLKLIYDRGL-IGSIHNWCEAYSTY--PRTYDLLHAWTVFSDI 533 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~-~~~l~~~~~rgl-~~~~~~~~e~~~~~--p~tfDlvh~~~~~~~~ 533 (617)
.+|||+|||+|.++..|++. +. +|+.+|. +.+++.+.++-- .+.+...+.++..+ +++||+|++..++.|+
T Consensus 46 ~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 122 (234)
T 3dtn_A 46 PDILDLGAGTGLLSAFLMEKYPEA---TFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYDMVVSALSIHHL 122 (234)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTC---EEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEEEEEEESCGGGS
T ss_pred CeEEEecCCCCHHHHHHHHhCCCC---eEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCceEEEEeCccccC
Confidence 57999999999999999986 55 4566663 567766665521 11222222333333 3899999999999987
Q ss_pred hhcCCCcccchhhccccccCcceEEEecChh-----------------------------------------HHHHHHHh
Q 007128 534 EKRGCSGEDLLLEMDRILRPTGFVIIRDKQS-----------------------------------------VVDFVKKY 572 (617)
Q Consensus 534 ~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~-----------------------------------------~~~~~~~~ 572 (617)
... +...+|.|+.|+|||||.+++.+... ..+++.++
T Consensus 123 ~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 200 (234)
T 3dtn_A 123 EDE--DKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNW 200 (234)
T ss_dssp CHH--HHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHH
T ss_pred CHH--HHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHH
Confidence 521 22359999999999999999987321 12456778
Q ss_pred hhhcccccccccccCCCCCCCCCCeEEEEEEecccc
Q 007128 573 LRALNWEAVATTADASSDSDKDGDEVVFIVQKKIWL 608 (617)
Q Consensus 573 ~~~~~w~~~~~~~~~~~~~~~~~~~~~l~~~K~~w~ 608 (617)
++..+++.+ ++.- ..-.-.++...|+=|.
T Consensus 201 l~~aGF~~v-~~~~------~~~~~~~~~~~~~~~~ 229 (234)
T 3dtn_A 201 LKEAGFRDV-SCIY------KYYQFAVMFGRKTEGH 229 (234)
T ss_dssp HHHTTCEEE-EEEE------EETTEEEEEEECC---
T ss_pred HHHcCCCce-eeee------eecceeEEEEEecccc
Confidence 888999886 3332 1234667777776553
No 145
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.95 E-value=2.8e-11 Score=123.70 Aligned_cols=100 Identities=16% Similarity=0.233 Sum_probs=72.9
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecc----c----------ccchhhhhhhcccCCcchhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRG----L----------IGSIHNWCEAYSTYPRTYDLL 524 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rg----l----------~~~~~~~~e~~~~~p~tfDlv 524 (617)
.+|||+|||+|.++..|++.+. +|+.+|. +.|++.|.++. . .+...+..+++ ..+++||+|
T Consensus 59 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~~fD~V 134 (293)
T 3thr_A 59 HRVLDVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDV-PAGDGFDAV 134 (293)
T ss_dssp CEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHS-CCTTCEEEE
T ss_pred CEEEEecCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcccc-ccCCCeEEE
Confidence 4699999999999999999877 6777774 68888776542 1 11111111111 123899999
Q ss_pred hhh-hhhhhhhh---cCCCcccchhhccccccCcceEEEecCh
Q 007128 525 HAW-TVFSDIEK---RGCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 525 h~~-~~~~~~~~---~~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
+|. .+|.|+.. ...++..+|.++.|+|||||++++..+.
T Consensus 135 ~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 135 ICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 998 89998861 0112789999999999999999998764
No 146
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.95 E-value=5e-11 Score=120.49 Aligned_cols=117 Identities=15% Similarity=0.136 Sum_probs=86.6
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCcccccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 293 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~~ 293 (617)
.+|||+|||+|.++..+++. .|+++|+++.++..++. .+...++.+.+..+|.... +++++||+|+++.. .+.
T Consensus 122 ~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~-n~~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~~-~~~-- 196 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEA-NAKRNGVRPRFLEGSLEAA-LPFGPFDLLVANLY-AEL-- 196 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHH-HHHHTTCCCEEEESCHHHH-GGGCCEEEEEEECC-HHH--
T ss_pred CEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHH-HHHHcCCcEEEEECChhhc-CcCCCCCEEEECCc-HHH--
Confidence 68999999999998887765 58999999988887773 4444555566666665542 45678999998643 232
Q ss_pred ccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhhhh
Q 007128 294 RDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRIAA 346 (617)
Q Consensus 294 ~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~v~ 346 (617)
...++.++.++|+|||+++++...... .+.+.+.+++.||+++.
T Consensus 197 -~~~~l~~~~~~LkpgG~lils~~~~~~--------~~~v~~~l~~~Gf~~~~ 240 (254)
T 2nxc_A 197 -HAALAPRYREALVPGGRALLTGILKDR--------APLVREAMAGAGFRPLE 240 (254)
T ss_dssp -HHHHHHHHHHHEEEEEEEEEEEEEGGG--------HHHHHHHHHHTTCEEEE
T ss_pred -HHHHHHHHHHHcCCCCEEEEEeeccCC--------HHHHHHHHHHCCCEEEE
Confidence 245889999999999999997543321 25678888899997654
No 147
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.95 E-value=5.1e-11 Score=112.81 Aligned_cols=111 Identities=15% Similarity=0.042 Sum_probs=81.9
Q ss_pred eEEEeecccccccccccccc-hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS-DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR 294 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~~~ 294 (617)
.+|||+|||+|.++..|++. .|+++|+++.++.. ..++.+.++|+.. ++++++||+|+|+..+ ++..+
T Consensus 25 ~~vLD~GcG~G~~~~~l~~~~~v~gvD~s~~~~~~---------~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~-~~~~~ 93 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRKRNTVVSTDLNIRALES---------HRGGNLVRADLLC-SINQESVDVVVFNPPY-VPDTD 93 (170)
T ss_dssp CEEEEETCTTCHHHHHHTTTSEEEEEESCHHHHHT---------CSSSCEEECSTTT-TBCGGGCSEEEECCCC-BTTCC
T ss_pred CeEEEeccCccHHHHHHHhcCcEEEEECCHHHHhc---------ccCCeEEECChhh-hcccCCCCEEEECCCC-ccCCc
Confidence 48999999999999999876 68889888866544 2356777888776 6667899999997664 33222
Q ss_pred c---------ceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhhhh
Q 007128 295 D---------GILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRIAA 346 (617)
Q Consensus 295 ~---------~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~v~ 346 (617)
. ..++.++.+.| |||++++..+... . .+++.+++++.||+...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~--~------~~~l~~~l~~~gf~~~~ 145 (170)
T 3q87_B 94 DPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEAN--R------PKEVLARLEERGYGTRI 145 (170)
T ss_dssp CTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGG--C------HHHHHHHHHHTTCEEEE
T ss_pred cccccCCcchHHHHHHHHhhC-CCCEEEEEEecCC--C------HHHHHHHHHHCCCcEEE
Confidence 2 34677888888 9999999764331 1 25677888999996543
No 148
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.94 E-value=8.9e-12 Score=131.51 Aligned_cols=101 Identities=17% Similarity=0.182 Sum_probs=76.6
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccccccccc-
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRID- 290 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h- 290 (617)
.+|||+|||+|.++..+++. .|+++|+++.++..++. .....++...+...|.... .+++||+|+|+..+++
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~-~~~~~~~~~~~~~~d~~~~--~~~~fD~Iv~~~~~~~g 274 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRA-TLAANGVEGEVFASNVFSE--VKGRFDMIISNPPFHDG 274 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHH-HHHHTTCCCEEEECSTTTT--CCSCEEEEEECCCCCSS
T ss_pred CeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHhCCCCEEEEcccccc--ccCCeeEEEECCCcccC
Confidence 47999999999999888764 58999999988877774 3444566666666666543 4679999999876432
Q ss_pred ---cccccceEEEEecccccCCceeeecChhh
Q 007128 291 ---WLQRDGILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 291 ---~~~~~~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
.......+++++.|+|||||.+++..+..
T Consensus 275 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 275 MQTSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp SHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred ccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 12233569999999999999999976543
No 149
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.94 E-value=2.5e-11 Score=120.42 Aligned_cols=127 Identities=11% Similarity=0.076 Sum_probs=84.0
Q ss_pred eeEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCCCcccccccccc---cCCCCCccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKR---LPYPSRSFELAHCSR 286 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~---lpf~~~sFDlV~~s~ 286 (617)
+.+|||+|||+|.++..|++. .|+++|+++.++..+. +.+..+ .++.+..+|+.. +++.+++||+|++..
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~-~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~ 155 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLI-NLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFADV 155 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHH-HHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEECC
T ss_pred CCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHH-HHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEEcC
Confidence 468999999999999988764 4899999987655444 444443 456777788766 556678999999754
Q ss_pred cccccccccceEEEEecccccCCceeeecChhhh-cCCHHHHHHHHHHHHHHHHhhhhhhh
Q 007128 287 CRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAY-AQDEEDLRIWKEMSALVERMCWRIAA 346 (617)
Q Consensus 287 ~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~~~-~~~~~~~~~w~~l~~l~~~~gf~~v~ 346 (617)
. ..+....++.++.++|||||+++++.+... .........+..-.+++++.||+.+.
T Consensus 156 ~---~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 213 (233)
T 2ipx_A 156 A---QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQE 213 (233)
T ss_dssp C---CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEE
T ss_pred C---CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEE
Confidence 3 111213357889999999999999754421 11111111122224667778886543
No 150
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.94 E-value=1.2e-10 Score=117.76 Aligned_cols=120 Identities=9% Similarity=0.107 Sum_probs=85.3
Q ss_pred eeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCCC--cccccccccccC--CCCCcccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGIP--AYLGVLGTKRLP--YPSRSFELAHCSRC 287 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~~--~~~~~~d~~~lp--f~~~sFDlV~~s~~ 287 (617)
+.+|||+|||+|.++..++++ .|+++|+++.++..++. .+...++. +.+..+|+..++ +++++||+|+|+..
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~-n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npP 128 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKR-SVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPP 128 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHH-HHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCC
T ss_pred CCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHH-HHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCC
Confidence 368999999999999988875 58999999988877774 34444443 778888887765 55789999998643
Q ss_pred cccc----c---------------cccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhh
Q 007128 288 RIDW----L---------------QRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRI 344 (617)
Q Consensus 288 l~h~----~---------------~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~ 344 (617)
.+.. . .+...++.++.++|||||++++..+.. . ..++...+.+.||..
T Consensus 129 y~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---~------~~~~~~~l~~~~~~~ 195 (259)
T 3lpm_A 129 YFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPE---R------LLDIIDIMRKYRLEP 195 (259)
T ss_dssp C-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTT---T------HHHHHHHHHHTTEEE
T ss_pred CCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHH---H------HHHHHHHHHHCCCce
Confidence 2211 0 111347888999999999999964321 1 245666777777754
No 151
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.94 E-value=5e-11 Score=127.74 Aligned_cols=123 Identities=11% Similarity=0.030 Sum_probs=89.4
Q ss_pred ccccCchhhHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc----hhhhhccCCCccchhhhHH------
Q 007128 185 THFHYGADKYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQF------ 254 (617)
Q Consensus 185 ~~F~~~a~~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~------ 254 (617)
..|.......+..+.+.+.. ..+ .+|||||||+|.++..++.. .|+|+|+++.++..|+...
T Consensus 152 ~vYGEt~~~~i~~il~~l~l------~~g--d~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr 223 (438)
T 3uwp_A 152 EVYGETSFDLVAQMIDEIKM------TDD--DLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKW 223 (438)
T ss_dssp GGGGGTHHHHHHHHHHHHCC------CTT--CEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHhcCC------CCC--CEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 34444455566667677665 333 68999999999998887743 3999999998777666432
Q ss_pred HHHhC---CCcccccccccccCCCC--CccccccccccccccccccceEEEEecccccCCceeeecCh
Q 007128 255 ALERG---IPAYLGVLGTKRLPYPS--RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 255 a~~rg---~~~~~~~~d~~~lpf~~--~sFDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p 317 (617)
+...+ .++.+..+|+..+|+.+ ..||+|+++.. +++ .+....|.++.|+|||||+|+++.+
T Consensus 224 ~~~~Gl~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~-~F~-pdl~~aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 224 MKWYGKKHAEYTLERGDFLSEEWRERIANTSVIFVNNF-AFG-PEVDHQLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp HHHHTBCCCEEEEEECCTTSHHHHHHHHTCSEEEECCT-TCC-HHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred HHHhCCCCCCeEEEECcccCCccccccCCccEEEEccc-ccC-chHHHHHHHHHHcCCCCcEEEEeec
Confidence 22334 35888999999988864 47999998755 333 4446688999999999999998754
No 152
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.94 E-value=1.3e-10 Score=133.10 Aligned_cols=104 Identities=16% Similarity=0.221 Sum_probs=82.2
Q ss_pred eeEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHH-----hC-CCcccccccccccCCCCCcccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALE-----RG-IPAYLGVLGTKRLPYPSRSFELAH 283 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~-----rg-~~~~~~~~d~~~lpf~~~sFDlV~ 283 (617)
+.+|||||||+|.++..|++. .|+|+|+++.++..++.+.... .+ .++.+.++|+..+++++++||+|+
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlVV 801 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGT 801 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEEE
Confidence 368999999999999998764 4899999998888776543322 12 257888999999999999999999
Q ss_pred cccccccccccc-ceEEEEecccccCCceeeecChhh
Q 007128 284 CSRCRIDWLQRD-GILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 284 ~s~~l~h~~~~~-~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
|..++.|+.++. ..+++++.|+|||| ++++++++.
T Consensus 802 ~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 802 CLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred EeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 998866654432 24889999999999 888876554
No 153
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.93 E-value=1.2e-10 Score=110.28 Aligned_cols=130 Identities=14% Similarity=0.181 Sum_probs=90.6
Q ss_pred hHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCC--Cccccccc
Q 007128 193 KYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLG 268 (617)
Q Consensus 193 ~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d 268 (617)
.....+.+.+.. ..+ .+|||+|||+|.++..+++. .|+++|+++.++..++.. ....+. ++.+...|
T Consensus 20 ~~~~~~~~~~~~------~~~--~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~-~~~~~~~~~~~~~~~d 90 (192)
T 1l3i_A 20 EVRCLIMCLAEP------GKN--DVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMN-LQRHGLGDNVTLMEGD 90 (192)
T ss_dssp HHHHHHHHHHCC------CTT--CEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHH-HHHTTCCTTEEEEESC
T ss_pred HHHHHHHHhcCC------CCC--CEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHH-HHHcCCCcceEEEecC
Confidence 344455555554 333 68999999999998888765 589999998877776633 333344 46666677
Q ss_pred ccccCCCC-CccccccccccccccccccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhh
Q 007128 269 TKRLPYPS-RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRI 344 (617)
Q Consensus 269 ~~~lpf~~-~sFDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~ 344 (617)
... ++++ ++||+|++...+.+ ...++.++.++|+|||++++..+.. ....++.+.+++.||+.
T Consensus 91 ~~~-~~~~~~~~D~v~~~~~~~~----~~~~l~~~~~~l~~gG~l~~~~~~~--------~~~~~~~~~l~~~g~~~ 154 (192)
T 1l3i_A 91 APE-ALCKIPDIDIAVVGGSGGE----LQEILRIIKDKLKPGGRIIVTAILL--------ETKFEAMECLRDLGFDV 154 (192)
T ss_dssp HHH-HHTTSCCEEEEEESCCTTC----HHHHHHHHHHTEEEEEEEEEEECBH--------HHHHHHHHHHHHTTCCC
T ss_pred HHH-hcccCCCCCEEEECCchHH----HHHHHHHHHHhcCCCcEEEEEecCc--------chHHHHHHHHHHCCCce
Confidence 655 2333 58999998765322 2468999999999999999975432 12356778888899843
No 154
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.93 E-value=5.5e-11 Score=117.88 Aligned_cols=122 Identities=13% Similarity=0.139 Sum_probs=82.7
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCCCcccccccccc----cCCCCCccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKR----LPYPSRSFELAHCSR 286 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~----lpf~~~sFDlV~~s~ 286 (617)
+.+|||+|||+|.++..|++. .|+++|+++.++..++. .+... .++.+..+|+.. +++. ++||+|++.
T Consensus 75 ~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~-~~~~~-~~v~~~~~d~~~~~~~~~~~-~~~D~v~~~- 150 (230)
T 1fbn_A 75 DSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLD-ACAER-ENIIPILGDANKPQEYANIV-EKVDVIYED- 150 (230)
T ss_dssp TCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHH-HTTTC-TTEEEEECCTTCGGGGTTTS-CCEEEEEEC-
T ss_pred CCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHH-HhhcC-CCeEEEECCCCCcccccccC-ccEEEEEEe-
Confidence 468999999999999888764 48999999987766653 23322 456777778777 7776 789999822
Q ss_pred ccccccccc---ceEEEEecccccCCceeeecChhh-hcCCHHHHHHH-HHHHHHHHHhhhhhhh
Q 007128 287 CRIDWLQRD---GILLLELDRLLRPGGYFAYSSPEA-YAQDEEDLRIW-KEMSALVERMCWRIAA 346 (617)
Q Consensus 287 ~l~h~~~~~---~~~L~el~RvLrPGG~lvis~p~~-~~~~~~~~~~w-~~l~~l~~~~gf~~v~ 346 (617)
..++ ..++.++.++|||||+++++.... ..........+ +++. ++++.||+.+.
T Consensus 151 -----~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~ 209 (230)
T 1fbn_A 151 -----VAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVD 209 (230)
T ss_dssp -----CCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEE
T ss_pred -----cCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEE
Confidence 2222 457999999999999999962111 11110011222 5666 77888986544
No 155
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.93 E-value=4.4e-11 Score=116.36 Aligned_cols=101 Identities=15% Similarity=0.093 Sum_probs=75.5
Q ss_pred eEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCC---CcccccccccccCC--CCCc-cccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGI---PAYLGVLGTKRLPY--PSRS-FELAHCSR 286 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~---~~~~~~~d~~~lpf--~~~s-FDlV~~s~ 286 (617)
.+|||+|||+|.++..++.+ .|+++|+++.++..++. .+...++ ++.+..+|+..+.. ++++ ||+|++..
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~-~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 133 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKK-NLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDP 133 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHH-HHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECC
T ss_pred CeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHH-HHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECC
Confidence 58999999999998876554 58999999998888874 4444454 57788888776532 3678 99999876
Q ss_pred cccccccccceEEEEe--cccccCCceeeecChhh
Q 007128 287 CRIDWLQRDGILLLEL--DRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 287 ~l~h~~~~~~~~L~el--~RvLrPGG~lvis~p~~ 319 (617)
. ++ ......++.++ .|+|+|||+++++....
T Consensus 134 ~-~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 134 P-FH-FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp C-SS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred C-CC-CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 5 33 23334577777 78999999999976544
No 156
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.93 E-value=1.7e-11 Score=131.29 Aligned_cols=102 Identities=16% Similarity=0.187 Sum_probs=74.9
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC----CcccccccccccCCCCCcccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI----PAYLGVLGTKRLPYPSRSFELAHCSRC 287 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~----~~~~~~~d~~~lpf~~~sFDlV~~s~~ 287 (617)
.+|||+|||+|.++..+++. .|+++|+++.++..++. .+...++ ++.+...|... ++++++||+|+|+..
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~-n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~npp 301 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRL-NVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCNPP 301 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHH-HHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEECCC
T ss_pred CeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHH-HHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEECCC
Confidence 68999999999999998875 58999999988887774 3444443 35567777765 567789999999876
Q ss_pred cccc--cccc--ceEEEEecccccCCceeeecChhh
Q 007128 288 RIDW--LQRD--GILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 288 l~h~--~~~~--~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
+++. .... ..+++++.++|||||+++++.+..
T Consensus 302 fh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~ 337 (375)
T 4dcm_A 302 FHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 337 (375)
T ss_dssp C-------CCHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred cccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECC
Confidence 4321 1111 146899999999999999975443
No 157
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.93 E-value=7e-11 Score=125.39 Aligned_cols=99 Identities=22% Similarity=0.311 Sum_probs=75.0
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC--CcccccccccccCCCCCccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRLPYPSRSFELAHCSRCR 288 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~lpf~~~sFDlV~~s~~l 288 (617)
..+|||||||+|.++..+++. .++++|+ +.++..++.+. ...++ ++.+..+|... +++. .||+|++..++
T Consensus 183 ~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~vl 258 (374)
T 1qzz_A 183 VRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRF-ADAGLADRVTVAEGDFFK-PLPV-TADVVLLSFVL 258 (374)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHH-HHTTCTTTEEEEECCTTS-CCSC-CEEEEEEESCG
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHH-HhcCCCCceEEEeCCCCC-cCCC-CCCEEEEeccc
Confidence 368999999999999888765 4788888 77777666433 33344 47777788754 4454 49999999987
Q ss_pred ccccccc-ceEEEEecccccCCceeeecCh
Q 007128 289 IDWLQRD-GILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 289 ~h~~~~~-~~~L~el~RvLrPGG~lvis~p 317 (617)
++|.+.. ..+|+++.++|+|||++++..+
T Consensus 259 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 259 LNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 7765442 3699999999999999998755
No 158
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.93 E-value=4.2e-11 Score=122.64 Aligned_cols=145 Identities=14% Similarity=0.065 Sum_probs=89.9
Q ss_pred hhHHHhhhcchhhHhhhcCC-ceEEEEeecCCC-CCceEEEeecc------------------ccc--------------
Q 007128 460 RNLMDMKAHLGSFAAALKEK-DVWVMSVVPEDG-PNTLKLIYDRG------------------LIG-------------- 505 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~-~~~v~~v~~~~~-~~~l~~~~~rg------------------l~~-------------- 505 (617)
.+|||+|||+|.++..++.. +. +|+.+|. +.|++.|.++- +.|
T Consensus 73 ~~vLDiGcG~G~~~~l~~~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 73 RTLIDIGSGPTVYQLLSACSHFE---DITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SEEEEETCTTCCGGGTTGGGGCS---EEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CeEEEECCCcChHHHHhhccCCC---eEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 46999999999965544443 33 6777774 67877665421 011
Q ss_pred ----c-hhhhhh--hcc--cCC-cchhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecCh------------
Q 007128 506 ----S-IHNWCE--AYS--TYP-RTYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ------------ 563 (617)
Q Consensus 506 ----~-~~~~~e--~~~--~~p-~tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~------------ 563 (617)
. ..|... +|. .++ ++||+|.|..+|.++.....++..+|.|+.|+|||||+|++.+..
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~ 229 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARL 229 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeee
Confidence 0 002111 121 133 779999999999984311126789999999999999999996421
Q ss_pred ----hHHHHHHHhhhhcccccccccccCC-----CCCCCCCCeEEEEEEecccc
Q 007128 564 ----SVVDFVKKYLRALNWEAVATTADAS-----SDSDKDGDEVVFIVQKKIWL 608 (617)
Q Consensus 564 ----~~~~~~~~~~~~~~w~~~~~~~~~~-----~~~~~~~~~~~l~~~K~~w~ 608 (617)
-..+++++++...+++.+ .+.... ..+.+...-.+.+++|+-|.
T Consensus 230 ~~~~~~~~~l~~~l~~aGf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (289)
T 2g72_A 230 TVVPVSEEEVREALVRSGYKVR-DLRTYIMPAHLQTGVDDVKGVFFAWAQKVGL 282 (289)
T ss_dssp ECCCCCHHHHHHHHHHTTEEEE-EEEEEECCGGGCCTTBCCCEEEEEEEEECC-
T ss_pred eeccCCHHHHHHHHHHcCCeEE-EeeEeeccccccccccCcceEEEEEEecccc
Confidence 146789999999888875 322111 11112333456667776663
No 159
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.93 E-value=8.7e-11 Score=122.52 Aligned_cols=129 Identities=12% Similarity=0.095 Sum_probs=91.6
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC--CcccccccccccCCCCCccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRLPYPSRSFELAHCSRCR 288 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~lpf~~~sFDlV~~s~~l 288 (617)
..+|||||||+|.++..+++. .++++|++ .++..++.... +.++ .+.+..+|....+++++ ||+|++.+++
T Consensus 166 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~l 242 (335)
T 2r3s_A 166 PLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENAR-IQGVASRYHTIAGSAFEVDYGND-YDLVLLPNFL 242 (335)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHH-HHTCGGGEEEEESCTTTSCCCSC-EEEEEEESCG
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHH-hcCCCcceEEEecccccCCCCCC-CcEEEEcchh
Confidence 368999999999999888765 58899998 77777764333 3343 37788888887777754 9999999987
Q ss_pred cccccc-cceEEEEecccccCCceeeecChhhhcC--CHHHHH----------------HHHHHHHHHHHhhhhhhh
Q 007128 289 IDWLQR-DGILLLELDRLLRPGGYFAYSSPEAYAQ--DEEDLR----------------IWKEMSALVERMCWRIAA 346 (617)
Q Consensus 289 ~h~~~~-~~~~L~el~RvLrPGG~lvis~p~~~~~--~~~~~~----------------~w~~l~~l~~~~gf~~v~ 346 (617)
+++.++ ...+|+++.++|+|||++++..+..... .+.... .-+++.++++++||+.+.
T Consensus 243 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~ 319 (335)
T 2r3s_A 243 HHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQ 319 (335)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEE
T ss_pred ccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeee
Confidence 766432 2469999999999999998864332210 000000 026778888888886654
No 160
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.93 E-value=4e-11 Score=118.32 Aligned_cols=117 Identities=9% Similarity=0.122 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHhhccccCccchhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc-ccchhhhhhhcc
Q 007128 438 SWRNRVDSYWNLLSPKIQSNSLRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL-IGSIHNWCEAYS 515 (617)
Q Consensus 438 ~Wk~~V~~y~~~l~~~i~~~~~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl-~~~~~~~~e~~~ 515 (617)
.|......+.+.+...+ ..-.+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.++.- +..++.-.+.++
T Consensus 22 ~~~~~~~~~~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~ 96 (239)
T 3bxo_A 22 DYAAEASDIADLVRSRT--PEASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQGDMRDFR 96 (239)
T ss_dssp CHHHHHHHHHHHHHHHC--TTCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCC
T ss_pred hHHHHHHHHHHHHHHhc--CCCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcc
Confidence 34444444444444323 2234799999999999999998765 5666664 577777666531 111111112222
Q ss_pred cCCcchhhhhh-hhhhhhhhhcCCCcccchhhccccccCcceEEEec
Q 007128 516 TYPRTYDLLHA-WTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRD 561 (617)
Q Consensus 516 ~~p~tfDlvh~-~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~ 561 (617)
++++||+|.| ..++.|+. ...++..+|.++.|+|||||.+++.+
T Consensus 97 -~~~~~D~v~~~~~~~~~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 97 -LGRKFSAVVSMFSSVGYLK-TTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp -CSSCEEEEEECTTGGGGCC-SHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred -cCCCCcEEEEcCchHhhcC-CHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 2589999995 55888774 11256789999999999999999974
No 161
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.93 E-value=6.6e-11 Score=124.90 Aligned_cols=127 Identities=16% Similarity=0.122 Sum_probs=83.6
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRID 290 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h 290 (617)
..+|||||||+|.++..++++ .++++|+++ .+..+..+. ......+.+..+|+. .+++ +||+|++..++++
T Consensus 185 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~-~~~~~~~~~-~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~vlh~ 259 (348)
T 3lst_A 185 TGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAE-VVARHRLDA-PDVAGRWKVVEGDFL-REVP--HADVHVLKRILHN 259 (348)
T ss_dssp SEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHH-HHTTCCCCC-GGGTTSEEEEECCTT-TCCC--CCSEEEEESCGGG
T ss_pred CceEEEECCccCHHHHHHHHHCCCCEEEEecCHH-Hhhcccccc-cCCCCCeEEEecCCC-CCCC--CCcEEEEehhccC
Confidence 479999999999999988764 467777743 222111100 111224677778875 4555 8999999998777
Q ss_pred ccccc-ceEEEEecccccCCceeeecChhhhcC--C-HH-HHH------------HHHHHHHHHHHhhhhhhh
Q 007128 291 WLQRD-GILLLELDRLLRPGGYFAYSSPEAYAQ--D-EE-DLR------------IWKEMSALVERMCWRIAA 346 (617)
Q Consensus 291 ~~~~~-~~~L~el~RvLrPGG~lvis~p~~~~~--~-~~-~~~------------~w~~l~~l~~~~gf~~v~ 346 (617)
|.++. ..+|+++.++|||||++++.+...... . .. ... ..+++.++++++||+.+.
T Consensus 260 ~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 332 (348)
T 3lst_A 260 WGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDR 332 (348)
T ss_dssp SCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEE
Confidence 65542 479999999999999999864322111 0 00 000 116788899999997654
No 162
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.93 E-value=4.2e-11 Score=123.83 Aligned_cols=133 Identities=17% Similarity=0.076 Sum_probs=91.9
Q ss_pred hhHHHhhhcchhhHhhhcC--C-ceEEEEeecCCC-CCceEEEeecc----cccchhhhhhhccc--CCcchhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKE--K-DVWVMSVVPEDG-PNTLKLIYDRG----LIGSIHNWCEAYST--YPRTYDLLHAWTV 529 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~--~-~~~v~~v~~~~~-~~~l~~~~~rg----l~~~~~~~~e~~~~--~p~tfDlvh~~~~ 529 (617)
.+|||+|||+|.++..|+. . +. +|+.+|. +.+++.+.++. +-..+...+.++.. ++++||+|.+..+
T Consensus 120 ~~vLDiGcG~G~~~~~la~~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~ 196 (305)
T 3ocj_A 120 CVVASVPCGWMSELLALDYSACPGV---QLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNGL 196 (305)
T ss_dssp CEEEETTCTTCHHHHTSCCTTCTTC---EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCSS
T ss_pred CEEEEecCCCCHHHHHHHHhcCCCC---eEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECCh
Confidence 4699999999999999952 2 34 5666664 56776665542 21112112222222 3499999999999
Q ss_pred hhhhhhcCCCccc---chhhccccccCcceEEEecCh---------------------------------------hHHH
Q 007128 530 FSDIEKRGCSGED---LLLEMDRILRPTGFVIIRDKQ---------------------------------------SVVD 567 (617)
Q Consensus 530 ~~~~~~~~c~~~~---~l~Em~RiLrPgG~~ii~~~~---------------------------------------~~~~ 567 (617)
+.|+. +... ++.|+.|+|||||++++.+.. -..+
T Consensus 197 ~~~~~----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (305)
T 3ocj_A 197 NIYEP----DDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHA 272 (305)
T ss_dssp GGGCC----CHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHH
T ss_pred hhhcC----CHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHH
Confidence 99875 4444 799999999999999998821 1367
Q ss_pred HHHHhhhhcccccccccccCCCCCCCCCCeEEEEEEec
Q 007128 568 FVKKYLRALNWEAVATTADASSDSDKDGDEVVFIVQKK 605 (617)
Q Consensus 568 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~~~K~ 605 (617)
+++++++..+++.+ ++.+ . ....-..++++|+
T Consensus 273 ~~~~~l~~aGF~~v-~~~~--~---~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 273 QTRAQLEEAGFTDL-RFED--D---RARLFPTVIARKP 304 (305)
T ss_dssp HHHHHHHHTTCEEE-EEEC--C---TTSSSCEEEEECC
T ss_pred HHHHHHHHCCCEEE-EEEc--c---cCceeeEEEEecC
Confidence 89999999999986 4443 1 1334567888884
No 163
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.92 E-value=1.2e-10 Score=123.02 Aligned_cols=128 Identities=19% Similarity=0.277 Sum_probs=88.3
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC--CcccccccccccCCCCCccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRLPYPSRSFELAHCSRCR 288 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~lpf~~~sFDlV~~s~~l 288 (617)
..+|||||||+|.++..+++. .++++|+ +.++..++.+ ....++ ++.+..+|... +++. .||+|++..++
T Consensus 184 ~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~vl 259 (360)
T 1tw3_A 184 VRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSY-LKDEGLSDRVDVVEGDFFE-PLPR-KADAIILSFVL 259 (360)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHH-HHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEESCG
T ss_pred CcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHH-HHhcCCCCceEEEeCCCCC-CCCC-CccEEEEcccc
Confidence 368999999999999888765 3677788 7777776633 333344 47777788754 4454 49999999987
Q ss_pred ccccccc-ceEEEEecccccCCceeeecChh-hh-cC-CHH--HHH------------HHHHHHHHHHHhhhhhhh
Q 007128 289 IDWLQRD-GILLLELDRLLRPGGYFAYSSPE-AY-AQ-DEE--DLR------------IWKEMSALVERMCWRIAA 346 (617)
Q Consensus 289 ~h~~~~~-~~~L~el~RvLrPGG~lvis~p~-~~-~~-~~~--~~~------------~w~~l~~l~~~~gf~~v~ 346 (617)
++|.++. ..+++++.++|+|||++++..+. .. .. ... ... .-+++.++++++||+.+.
T Consensus 260 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 335 (360)
T 1tw3_A 260 LNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEE 335 (360)
T ss_dssp GGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEE
T ss_pred cCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEE
Confidence 7765432 36899999999999999987543 11 11 110 000 016778888888987654
No 164
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.92 E-value=8.9e-11 Score=120.33 Aligned_cols=101 Identities=13% Similarity=0.151 Sum_probs=73.9
Q ss_pred eeEEEeecccccc----ccccccc--------chhhhhccCCCccchhhhHHHH---H-------------------hC-
Q 007128 215 LRTVLDVGCGVAS----FGAYLLS--------SDVITMSLAPNDVHQNQIQFAL---E-------------------RG- 259 (617)
Q Consensus 215 ~~~VLDVGCG~G~----~~~~L~~--------~~V~gvDis~~dl~~a~~~~a~---~-------------------rg- 259 (617)
..+|||+|||+|. ++..|++ ..|+|+|+|+.+++.|+...-. . .+
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 3689999999996 5544543 2589999999988887743200 0 00
Q ss_pred --------CCcccccccccccCCC-CCcccccccccccccccccc-ceEEEEecccccCCceeeec
Q 007128 260 --------IPAYLGVLGTKRLPYP-SRSFELAHCSRCRIDWLQRD-GILLLELDRLLRPGGYFAYS 315 (617)
Q Consensus 260 --------~~~~~~~~d~~~lpf~-~~sFDlV~~s~~l~h~~~~~-~~~L~el~RvLrPGG~lvis 315 (617)
-.+.|.+.|....|++ .+.||+|+|.++++++.+.. ..++.+++++|+|||+|++.
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 1366777787776665 57899999999866553321 46999999999999999995
No 165
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.92 E-value=3.3e-11 Score=120.82 Aligned_cols=144 Identities=10% Similarity=0.065 Sum_probs=93.0
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc-----------------------------------
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL----------------------------------- 503 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl----------------------------------- 503 (617)
.+|||+|||+|.++..|+..+. .+|+.+|. +.+++.+.++.-
T Consensus 58 ~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 135 (265)
T 2i62_A 58 ELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRA 135 (265)
T ss_dssp EEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHH
T ss_pred CEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhh
Confidence 4699999999999999998765 35666774 567666644311
Q ss_pred c-cch-hhhhhhcccCC---cchhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecChh--------------
Q 007128 504 I-GSI-HNWCEAYSTYP---RTYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS-------------- 564 (617)
Q Consensus 504 ~-~~~-~~~~e~~~~~p---~tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~-------------- 564 (617)
+ ..+ .+..+..+.-+ ++||+|+|..+++++..+.-++..+|.++.|+|||||++++.+...
T Consensus 136 v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~ 215 (265)
T 2i62_A 136 IKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSSL 215 (265)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECC
T ss_pred heeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCcccccc
Confidence 1 111 12111111112 7999999999998543222267789999999999999999986321
Q ss_pred --HHHHHHHhhhhcccccccccccCC-CC--CCCCCCeEEEEEEec
Q 007128 565 --VVDFVKKYLRALNWEAVATTADAS-SD--SDKDGDEVVFIVQKK 605 (617)
Q Consensus 565 --~~~~~~~~~~~~~w~~~~~~~~~~-~~--~~~~~~~~~l~~~K~ 605 (617)
..+++.+++...+++.+....... .. ........+++|+|.
T Consensus 216 ~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~ 261 (265)
T 2i62_A 216 PLGWETVRDAVEEAGYTIEQFEVISQNYSSTTSNNEGLFSLVGRKP 261 (265)
T ss_dssp CCCHHHHHHHHHHTTCEEEEEEEECCCCCTTTBCCCCEEEEEEECC
T ss_pred ccCHHHHHHHHHHCCCEEEEEEEecccCCccccccceEEEEEeccc
Confidence 345889999999998752222110 11 111234667888884
No 166
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.92 E-value=2.2e-11 Score=118.33 Aligned_cols=115 Identities=16% Similarity=0.211 Sum_probs=84.4
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecccccchhhhhhhccc-C-Ccchhhhhhhhhhhhhhhc
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGLIGSIHNWCEAYST-Y-PRTYDLLHAWTVFSDIEKR 536 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl~~~~~~~~e~~~~-~-p~tfDlvh~~~~~~~~~~~ 536 (617)
.+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.++|+ ..+...+.++.. + +++||+|++..++.|+...
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~-~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~~~~~ 123 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGLAD---RVTALDGSAEMIAEAGRHGL-DNVEFRQQDLFDWTPDRQWDAVFFAHWLAHVPDD 123 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHGGGCC-TTEEEEECCTTSCCCSSCEEEEEEESCGGGSCHH
T ss_pred CeEEEECCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHhcCC-CCeEEEecccccCCCCCceeEEEEechhhcCCHH
Confidence 3799999999999999998866 5666663 577777776663 111111112111 2 3999999999999988621
Q ss_pred CCCcccchhhccccccCcceEEEecChh----------------------------------HHHHHHHhhhhccccc
Q 007128 537 GCSGEDLLLEMDRILRPTGFVIIRDKQS----------------------------------VVDFVKKYLRALNWEA 580 (617)
Q Consensus 537 ~c~~~~~l~Em~RiLrPgG~~ii~~~~~----------------------------------~~~~~~~~~~~~~w~~ 580 (617)
.+..+|.++.|+|||||.+++.+... ..+++.+++++.+|++
T Consensus 124 --~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v 199 (218)
T 3ou2_A 124 --RFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSC 199 (218)
T ss_dssp --HHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEE
T ss_pred --HHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEE
Confidence 24789999999999999999986521 3367888999999986
No 167
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.91 E-value=3.6e-11 Score=112.22 Aligned_cols=123 Identities=18% Similarity=0.203 Sum_probs=84.0
Q ss_pred ccCchhhHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCccc
Q 007128 187 FHYGADKYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYL 264 (617)
Q Consensus 187 F~~~a~~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~ 264 (617)
+......+.+.+.+.+.. ...+..+|||+|||+|.++..+++. .|+++|+++.++..++.+ +...++++.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~------~~~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~~ 92 (171)
T 1ws6_A 20 ARPSPVRLRKALFDYLRL------RYPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKEN-VRRTGLGARV 92 (171)
T ss_dssp CCCCCHHHHHHHHHHHHH------HCTTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHH-HHHHTCCCEE
T ss_pred CCCCHHHHHHHHHHHHHh------hccCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHH-HHHcCCceEE
Confidence 344445555666655542 1112368999999999999888765 489999999888877743 3334446777
Q ss_pred cccccccc-CC-C--CCccccccccccccccccccceEEEEec--ccccCCceeeecChhh
Q 007128 265 GVLGTKRL-PY-P--SRSFELAHCSRCRIDWLQRDGILLLELD--RLLRPGGYFAYSSPEA 319 (617)
Q Consensus 265 ~~~d~~~l-pf-~--~~sFDlV~~s~~l~h~~~~~~~~L~el~--RvLrPGG~lvis~p~~ 319 (617)
...|+... +. + .++||+|++...+ + .....++..+. ++|+|||+++++.+..
T Consensus 93 ~~~d~~~~~~~~~~~~~~~D~i~~~~~~-~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 93 VALPVEVFLPEAKAQGERFTVAFMAPPY-A--MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp ECSCHHHHHHHHHHTTCCEEEEEECCCT-T--SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred EeccHHHHHHhhhccCCceEEEEECCCC-c--hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 77777652 21 1 2479999987653 2 33345667777 9999999999976554
No 168
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.91 E-value=9.7e-12 Score=143.21 Aligned_cols=114 Identities=15% Similarity=0.172 Sum_probs=72.2
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----ccc-cchh----hhhhhcccCCcchhhhhhhh-
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GLI-GSIH----NWCEAYSTYPRTYDLLHAWT- 528 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl~-~~~~----~~~e~~~~~p~tfDlvh~~~- 528 (617)
.+|||+|||+|+|+.+++..+.. .|+.+|. +.+++.+.++ |+- ..+. |..+-+....++||+|.++-
T Consensus 541 ~~VLDlg~GtG~~sl~aa~~ga~--~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 541 KDFLNLFSYTGSATVHAGLGGAR--STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CcEEEeeechhHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 36999999999999999887652 3666664 5666666554 331 0111 22111222347999998743
Q ss_pred ----------hhhhhhhcCCCcccchhhccccccCcceEEEecChhHHHHHHHhhhhcccc
Q 007128 529 ----------VFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQSVVDFVKKYLRALNWE 579 (617)
Q Consensus 529 ----------~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~~~~~~~~~~~~~~w~ 579 (617)
++.... +...++.++.|+|||||+++++........-.+.+...+++
T Consensus 619 ~f~~~~~~~~~~~~~~----~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~~~l~~~g~~ 675 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQR----DHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLK 675 (703)
T ss_dssp SBC-------CCBHHH----HHHHHHHHHHHHEEEEEEEEEEECCTTCCCCHHHHHHTTEE
T ss_pred cccCCccchhHHHHHH----HHHHHHHHHHHhcCCCcEEEEEECCcccccCHHHHHHcCCc
Confidence 222222 44578999999999999999988764322234555566666
No 169
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.91 E-value=9.7e-12 Score=119.09 Aligned_cols=114 Identities=18% Similarity=0.255 Sum_probs=80.4
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc--ccchhhhhhhcccCCcchhhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL--IGSIHNWCEAYSTYPRTYDLLHAWTVFSD 532 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl--~~~~~~~~e~~~~~p~tfDlvh~~~~~~~ 532 (617)
.+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.++ |+ +-.++.-.+.++. +++||+|.+..++.|
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~ 109 (199)
T 2xvm_A 34 GKTLDLGCGNGRNSLYLAANGY---DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLMF 109 (199)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGGG
T ss_pred CeEEEEcCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhhh
Confidence 4799999999999999998876 5666664 5666655543 22 1111111122232 689999999999997
Q ss_pred hhhcCCCcccchhhccccccCcceEEEecChh--------------HHHHHHHhhhhcccccc
Q 007128 533 IEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS--------------VVDFVKKYLRALNWEAV 581 (617)
Q Consensus 533 ~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~--------------~~~~~~~~~~~~~w~~~ 581 (617)
+... ++..+|.++.|+|||||.++|.+... ..++++++++. |+.+
T Consensus 110 ~~~~--~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~ 168 (199)
T 2xvm_A 110 LEAK--TIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERV 168 (199)
T ss_dssp SCGG--GHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEE
T ss_pred CCHH--HHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEE
Confidence 7422 56789999999999999988765321 34578888887 8775
No 170
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.90 E-value=1.8e-10 Score=115.22 Aligned_cols=117 Identities=13% Similarity=0.118 Sum_probs=87.4
Q ss_pred eEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHH-hCCCcccccccccccCCCCCcccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALE-RGIPAYLGVLGTKRLPYPSRSFELAHCSRCRI 289 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~-rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~ 289 (617)
.+|||+|||+|.++..+++. .|+++|+++.++..++...... ...++.+...|+...++++++||+|++.
T Consensus 98 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~~---- 173 (258)
T 2pwy_A 98 MRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALD---- 173 (258)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEEE----
T ss_pred CEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEEC----
Confidence 68999999999999888765 4899999998887776443332 2235778888888888888899999863
Q ss_pred ccccccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhhhh
Q 007128 290 DWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRIAA 346 (617)
Q Consensus 290 h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~v~ 346 (617)
. .++..++.++.++|+|||++++..+... ...++.+.+++.||..+.
T Consensus 174 -~-~~~~~~l~~~~~~L~~gG~l~~~~~~~~--------~~~~~~~~l~~~gf~~~~ 220 (258)
T 2pwy_A 174 -L-MEPWKVLEKAALALKPDRFLVAYLPNIT--------QVLELVRAAEAHPFRLER 220 (258)
T ss_dssp -S-SCGGGGHHHHHHHEEEEEEEEEEESCHH--------HHHHHHHHHTTTTEEEEE
T ss_pred -C-cCHHHHHHHHHHhCCCCCEEEEEeCCHH--------HHHHHHHHHHHCCCceEE
Confidence 2 2335789999999999999999765431 134556666778886544
No 171
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.90 E-value=1.8e-11 Score=119.36 Aligned_cols=116 Identities=9% Similarity=0.175 Sum_probs=82.5
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCC-CCCceEEEeecc-c--------------ccchhhhhhhcccCC----c
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPED-GPNTLKLIYDRG-L--------------IGSIHNWCEAYSTYP----R 519 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~-~~~~l~~~~~rg-l--------------~~~~~~~~e~~~~~p----~ 519 (617)
.+|||+|||+|.++..|++++. .|+.+| ++.|++.|.++. . ...+...+.++..+| +
T Consensus 24 ~~vLD~GCG~G~~~~~la~~g~---~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~ 100 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQGY---HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIG 100 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHHCC---EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHH
T ss_pred CEEEEeCCCCcHhHHHHHHCCC---eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCC
Confidence 3699999999999999999876 677777 468888777662 1 122333334444443 6
Q ss_pred chhhhhhhhhhhhhhhcCCCcccchhhccccccCcce--EEEecCh----------hHHHHHHHhhhhcccccc
Q 007128 520 TYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGF--VIIRDKQ----------SVVDFVKKYLRALNWEAV 581 (617)
Q Consensus 520 tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~--~ii~~~~----------~~~~~~~~~~~~~~w~~~ 581 (617)
+||+|.+..+|.|+.. .+...++.||.|+|||||. ++..+.. -..++++.++.. +|+.+
T Consensus 101 ~fD~v~~~~~l~~l~~--~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~ 171 (203)
T 1pjz_A 101 HCAAFYDRAAMIALPA--DMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVT 171 (203)
T ss_dssp SEEEEEEESCGGGSCH--HHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEE
T ss_pred CEEEEEECcchhhCCH--HHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEE
Confidence 8999999888887742 1456789999999999998 3332221 135789999988 88764
No 172
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.90 E-value=1.9e-10 Score=122.96 Aligned_cols=99 Identities=16% Similarity=0.198 Sum_probs=77.4
Q ss_pred eeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCCC--cccccccccccCCCCCcccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGIP--AYLGVLGTKRLPYPSRSFELAHCSRCRI 289 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~~--~~~~~~d~~~lpf~~~sFDlV~~s~~l~ 289 (617)
+.+|||||||+|.++..++++ .|+++|++ .++..++ +.+...++. +.+..+|+..++++ ++||+|+|... .
T Consensus 64 ~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~-~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~-~ 139 (376)
T 3r0q_C 64 GKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHAR-ALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWM-G 139 (376)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHH-HHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCC-B
T ss_pred CCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHH-HHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcCh-h
Confidence 368999999999999888875 58999999 7887776 445555554 78888999998887 89999998543 3
Q ss_pred ccc---cccceEEEEecccccCCceeeecCh
Q 007128 290 DWL---QRDGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 290 h~~---~~~~~~L~el~RvLrPGG~lvis~p 317 (617)
++. .....++.++.++|||||+++++..
T Consensus 140 ~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 140 YFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp TTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred hcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 333 2234588899999999999998643
No 173
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.90 E-value=1.6e-10 Score=121.97 Aligned_cols=98 Identities=15% Similarity=0.194 Sum_probs=75.3
Q ss_pred eEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCC--CcccccccccccCCCCCccccccccccc--
Q 007128 216 RTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRLPYPSRSFELAHCSRCR-- 288 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~lpf~~~sFDlV~~s~~l-- 288 (617)
.+|||||||+|.++..+++. .|+++|+++ ++..++ +.....+. ++.+..+|+..+++++++||+|++..+.
T Consensus 66 ~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~-~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~ 143 (340)
T 2fyt_A 66 KVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAM-DIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGYF 143 (340)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHH-HHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBTT
T ss_pred CEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHH-HHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchhh
Confidence 68999999999999888765 589999996 776665 34444443 5778888999999988899999986521
Q ss_pred cccccccceEEEEecccccCCceeeec
Q 007128 289 IDWLQRDGILLLELDRLLRPGGYFAYS 315 (617)
Q Consensus 289 ~h~~~~~~~~L~el~RvLrPGG~lvis 315 (617)
+++......++.++.|+|||||+++..
T Consensus 144 l~~~~~~~~~l~~~~~~LkpgG~lip~ 170 (340)
T 2fyt_A 144 LLFESMLDSVLYAKNKYLAKGGSVYPD 170 (340)
T ss_dssp BTTTCHHHHHHHHHHHHEEEEEEEESC
T ss_pred ccCHHHHHHHHHHHHhhcCCCcEEEcc
Confidence 222333345888999999999999853
No 174
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.90 E-value=1.9e-11 Score=125.30 Aligned_cols=116 Identities=20% Similarity=0.225 Sum_probs=82.5
Q ss_pred chhhHHHhhhcchhhHhhhcCC-ceEEEEeecCCC-CCceEEEeec----ccccchhhhh---hhcccCC-cchhhhhhh
Q 007128 458 SLRNLMDMKAHLGSFAAALKEK-DVWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWC---EAYSTYP-RTYDLLHAW 527 (617)
Q Consensus 458 ~~r~vLD~g~G~G~fa~~L~~~-~~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~---e~~~~~p-~tfDlvh~~ 527 (617)
.-.+|||+|||+|.++..|++. +. +|+.+|. +.+++.+.++ |+-..++..+ +.++ ++ ++||+|++.
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~ 157 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKFGV---SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP-CEDNSYDFIWSQ 157 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS-SCTTCEEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC-CCCCCEeEEEec
Confidence 3347999999999999999986 65 5666664 5777666554 3211111111 2223 33 899999999
Q ss_pred hhhhhhhhcCCCcccchhhccccccCcceEEEecChh----------------------HHHHHHHhhhhcccccc
Q 007128 528 TVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS----------------------VVDFVKKYLRALNWEAV 581 (617)
Q Consensus 528 ~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~----------------------~~~~~~~~~~~~~w~~~ 581 (617)
.++.|+. ++..+|.|+.|+|||||++++.+... ..+++.+++...+++.+
T Consensus 158 ~~l~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 229 (297)
T 2o57_A 158 DAFLHSP----DKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTL 229 (297)
T ss_dssp SCGGGCS----CHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEE
T ss_pred chhhhcC----CHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEE
Confidence 9999886 68899999999999999999987531 23346667777777664
No 175
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.89 E-value=2.1e-10 Score=113.02 Aligned_cols=108 Identities=11% Similarity=0.090 Sum_probs=77.6
Q ss_pred hHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCccccccccc
Q 007128 193 KYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTK 270 (617)
Q Consensus 193 ~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~ 270 (617)
...+.+.+.+.. .. +.+|||||||+|.++..|++. .|+++|+++.++..++... ...+ ++.+..+|..
T Consensus 57 ~~~~~~~~~~~~------~~--~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~-~~~~-~v~~~~~d~~ 126 (231)
T 1vbf_A 57 NLGIFMLDELDL------HK--GQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLL-SYYN-NIKLILGDGT 126 (231)
T ss_dssp HHHHHHHHHTTC------CT--TCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHH-TTCS-SEEEEESCGG
T ss_pred HHHHHHHHhcCC------CC--CCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHH-hhcC-CeEEEECCcc
Confidence 344556666654 33 368999999999999988875 5899999887776665332 2223 6677777876
Q ss_pred ccCCCCCccccccccccccccccccceEEEEecccccCCceeeecCh
Q 007128 271 RLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 271 ~lpf~~~sFDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p 317 (617)
.....+++||+|++..++.|.. .++.++|+|||+++++.+
T Consensus 127 ~~~~~~~~fD~v~~~~~~~~~~-------~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 127 LGYEEEKPYDRVVVWATAPTLL-------CKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp GCCGGGCCEEEEEESSBBSSCC-------HHHHHTEEEEEEEEEEEC
T ss_pred cccccCCCccEEEECCcHHHHH-------HHHHHHcCCCcEEEEEEc
Confidence 6333467899999987754432 368999999999999754
No 176
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.89 E-value=6.2e-11 Score=118.65 Aligned_cols=102 Identities=17% Similarity=0.136 Sum_probs=74.9
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHH-----HhC-CCcccccccccc-cC--CCCCcccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFAL-----ERG-IPAYLGVLGTKR-LP--YPSRSFEL 281 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~-----~rg-~~~~~~~~d~~~-lp--f~~~sFDl 281 (617)
..+|||||||+|.++..|++. .|+|+|+++.++..++.+... ..+ .++.+..+|+.. ++ +++++||.
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~ 126 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTK 126 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEE
T ss_pred CCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeE
Confidence 368999999999999998865 589999999988877644322 122 357788888876 77 78899999
Q ss_pred ccccccccccccc--------cceEEEEecccccCCceeeecCh
Q 007128 282 AHCSRCRIDWLQR--------DGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 282 V~~s~~l~h~~~~--------~~~~L~el~RvLrPGG~lvis~p 317 (617)
|++... .+|... ...+++++.++|||||.|++.+.
T Consensus 127 v~~~~~-dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 127 MFFLFP-DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp EEEESC-C-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEEeCC-CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 986543 223211 02488999999999999999743
No 177
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.89 E-value=3.4e-11 Score=122.62 Aligned_cols=96 Identities=8% Similarity=0.112 Sum_probs=71.5
Q ss_pred hhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc-ccchhhhhhhcccCCcchhhhhhhhhhhhhhhc
Q 007128 459 LRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL-IGSIHNWCEAYSTYPRTYDLLHAWTVFSDIEKR 536 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl-~~~~~~~~e~~~~~p~tfDlvh~~~~~~~~~~~ 536 (617)
-.+|||+|||+|.++..|++.+. +|+.+|. +.|++.+.++.- +..+..-.+.++ ++++||+|++..++.|+.
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~-- 131 (279)
T 3ccf_A 58 GEFILDLGCGTGQLTEKIAQSGA---EVLGTDNAATMIEKARQNYPHLHFDVADARNFR-VDKPLDAVFSNAMLHWVK-- 131 (279)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSCEEECCTTTCC-CSSCEEEEEEESCGGGCS--
T ss_pred CCEEEEecCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHhhCCCCEEEECChhhCC-cCCCcCEEEEcchhhhCc--
Confidence 34699999999999999998766 5566663 577776665521 111111112233 368999999999999876
Q ss_pred CCCcccchhhccccccCcceEEEecC
Q 007128 537 GCSGEDLLLEMDRILRPTGFVIIRDK 562 (617)
Q Consensus 537 ~c~~~~~l~Em~RiLrPgG~~ii~~~ 562 (617)
++..+|.|+.|+|||||++++...
T Consensus 132 --d~~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 132 --EPEAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --CHHHHHHHHHHhcCCCcEEEEEec
Confidence 788999999999999999999754
No 178
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.89 E-value=1.1e-10 Score=118.93 Aligned_cols=116 Identities=9% Similarity=0.123 Sum_probs=85.6
Q ss_pred eeEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHh-CC-CcccccccccccCCCCCcccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALER-GI-PAYLGVLGTKRLPYPSRSFELAHCSRC 287 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~r-g~-~~~~~~~d~~~lpf~~~sFDlV~~s~~ 287 (617)
+.+|||+|||+|.++..+++. .|+++|+++.++..++... ... +. ++.+..+|+.. ++++++||+|++.
T Consensus 111 ~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~~-- 186 (275)
T 1yb2_A 111 GMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNL-SEFYDIGNVRTSRSDIAD-FISDQMYDAVIAD-- 186 (275)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHH-HTTSCCTTEEEECSCTTT-CCCSCCEEEEEEC--
T ss_pred cCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHH-HhcCCCCcEEEEECchhc-cCcCCCccEEEEc--
Confidence 368999999999999888764 4899999998877766433 333 33 47777888776 6677899999862
Q ss_pred ccccccccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhhhh
Q 007128 288 RIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRIAA 346 (617)
Q Consensus 288 l~h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~v~ 346 (617)
. .++..+++++.++|||||+++++++... ..+++.+.+++.||..+.
T Consensus 187 ---~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~--------~~~~~~~~l~~~Gf~~~~ 233 (275)
T 1yb2_A 187 ---I-PDPWNHVQKIASMMKPGSVATFYLPNFD--------QSEKTVLSLSASGMHHLE 233 (275)
T ss_dssp ---C-SCGGGSHHHHHHTEEEEEEEEEEESSHH--------HHHHHHHHSGGGTEEEEE
T ss_pred ---C-cCHHHHHHHHHHHcCCCCEEEEEeCCHH--------HHHHHHHHHHHCCCeEEE
Confidence 2 2335799999999999999999875431 124566667778885543
No 179
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.89 E-value=7.2e-11 Score=119.20 Aligned_cols=96 Identities=17% Similarity=0.212 Sum_probs=72.6
Q ss_pred hhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecccccchhhhhhhcccCC-cchhhhhhhhhhhhhhhc
Q 007128 459 LRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGLIGSIHNWCEAYSTYP-RTYDLLHAWTVFSDIEKR 536 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl~~~~~~~~e~~~~~p-~tfDlvh~~~~~~~~~~~ 536 (617)
-.+|||+|||+|.++..|++.+. +|+.+|. +.|++.+.++.-+..++.-.+.++ ++ ++||+||+..++.|+.
T Consensus 35 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~~~-- 108 (261)
T 3ege_A 35 GSVIADIGAGTGGYSVALANQGL---FVYAVEPSIVMRQQAVVHPQVEWFTGYAENLA-LPDKSVDGVISILAIHHFS-- 108 (261)
T ss_dssp TCEEEEETCTTSHHHHHHHTTTC---EEEEECSCHHHHHSSCCCTTEEEECCCTTSCC-SCTTCBSEEEEESCGGGCS--
T ss_pred CCEEEEEcCcccHHHHHHHhCCC---EEEEEeCCHHHHHHHHhccCCEEEECchhhCC-CCCCCEeEEEEcchHhhcc--
Confidence 45799999999999999999876 5666664 577776666642222222123334 44 8999999999999886
Q ss_pred CCCcccchhhccccccCcceEEEecCh
Q 007128 537 GCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 537 ~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
++..+|.|+.|+|| ||++++.+..
T Consensus 109 --~~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 109 --HLEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp --SHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred --CHHHHHHHHHHHhC-CcEEEEEEcC
Confidence 88999999999999 9988776654
No 180
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.89 E-value=3e-11 Score=117.82 Aligned_cols=106 Identities=16% Similarity=0.218 Sum_probs=74.8
Q ss_pred CccchhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc-ccchhhhhhhcccC--Ccchhhhhhhhhh
Q 007128 455 QSNSLRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL-IGSIHNWCEAYSTY--PRTYDLLHAWTVF 530 (617)
Q Consensus 455 ~~~~~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl-~~~~~~~~e~~~~~--p~tfDlvh~~~~~ 530 (617)
....-.+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.++.- .+.++..+.++..+ +++||+|.|..++
T Consensus 48 ~~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l 124 (216)
T 3ofk_A 48 SSGAVSNGLEIGCAAGAFTEKLAPHCK---RLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVVAEVL 124 (216)
T ss_dssp TTSSEEEEEEECCTTSHHHHHHGGGEE---EEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEEEEESCG
T ss_pred ccCCCCcEEEEcCCCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEEEEccHH
Confidence 334455799999999999999999864 6777774 577777766532 11222222222222 3999999999999
Q ss_pred hhhhhcCCCcccchhhccccccCcceEEEecChh
Q 007128 531 SDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS 564 (617)
Q Consensus 531 ~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~ 564 (617)
.|+.. ...+..+|.++.|+|||||.+++.++..
T Consensus 125 ~~~~~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 125 YYLED-MTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp GGSSS-HHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred HhCCC-HHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 98861 1122567999999999999999976544
No 181
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.89 E-value=5.4e-11 Score=122.22 Aligned_cols=96 Identities=9% Similarity=0.156 Sum_probs=66.9
Q ss_pred hhHHHhhhcchhhHhhh----cC--CceEEEEeecCCC-CCceEEEeec-----ccccch-----hhhhhhcc-----cC
Q 007128 460 RNLMDMKAHLGSFAAAL----KE--KDVWVMSVVPEDG-PNTLKLIYDR-----GLIGSI-----HNWCEAYS-----TY 517 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L----~~--~~~~v~~v~~~~~-~~~l~~~~~r-----gl~~~~-----~~~~e~~~-----~~ 517 (617)
.+|||+|||+|.++..+ +. .++.| .++.+|. ++|++.+.++ |+ ..+ +.-.++++ .+
T Consensus 54 ~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v-~~~~vD~S~~ml~~a~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 54 IKILSIGGGAGEIDLQILSKVQAQYPGVCI-NNEVVEPSAEQIAKYKELVAKTSNL-ENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHSTTCEE-EEEEECSCHHHHHHHHHHHHTCSSC-TTEEEEEECSCHHHHHHHHHTTT
T ss_pred CeEEEEcCCCCHHHHHHHHHHHhhCCCcee-eEEEEeCCHHHHHHHHHHHHhccCC-CcceEEEEecchhhhhhhhcccc
Confidence 36999999999876533 32 13321 3467773 6888877665 22 111 11112332 13
Q ss_pred -CcchhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEec
Q 007128 518 -PRTYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRD 561 (617)
Q Consensus 518 -p~tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~ 561 (617)
+++||+|+|..++.|+. |+..+|.||.|+|||||+++|..
T Consensus 132 ~~~~fD~V~~~~~l~~~~----d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYVK----DIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp CCCCEEEEEEESCGGGCS----CHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCceeEEEEeeeeeecC----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 38999999999999887 88999999999999999999864
No 182
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.89 E-value=5.7e-11 Score=120.02 Aligned_cols=97 Identities=25% Similarity=0.301 Sum_probs=70.8
Q ss_pred chhhHHHhhhcchhhHhhhcCC-ceEEEEeecCCC-CCceEEEeec----ccccchhhhh---hhcccCC-cchhhhhhh
Q 007128 458 SLRNLMDMKAHLGSFAAALKEK-DVWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWC---EAYSTYP-RTYDLLHAW 527 (617)
Q Consensus 458 ~~r~vLD~g~G~G~fa~~L~~~-~~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~---e~~~~~p-~tfDlvh~~ 527 (617)
.-.+|||+|||+|.++..|++. +. +|+.+|. +.+++.+.++ |+...+...+ +.++ ++ ++||+|++.
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~ 136 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATARDV---RVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP-FEDASFDAVWAL 136 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHSCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-SCTTCEEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhcCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC-CCCCCccEEEEe
Confidence 3347999999999999999874 55 5666664 5666666554 3311111111 2222 33 899999999
Q ss_pred hhhhhhhhcCCCcccchhhccccccCcceEEEecC
Q 007128 528 TVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDK 562 (617)
Q Consensus 528 ~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~ 562 (617)
.+|.|+. +...+|.|+.|+|||||.++|.+.
T Consensus 137 ~~l~~~~----~~~~~l~~~~~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 137 ESLHHMP----DRGRALREMARVLRPGGTVAIADF 167 (273)
T ss_dssp SCTTTSS----CHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred chhhhCC----CHHHHHHHHHHHcCCCeEEEEEEe
Confidence 9999886 678999999999999999999874
No 183
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.88 E-value=1.1e-10 Score=122.83 Aligned_cols=130 Identities=12% Similarity=0.101 Sum_probs=91.1
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC--CcccccccccccC-CCCCcccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRLP-YPSRSFELAHCSRC 287 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~lp-f~~~sFDlV~~s~~ 287 (617)
..+|||||||+|.++..++++ .++++|+ +.++..++. ...+.++ .+.+..+|....+ +..+.||+|++.++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~v 257 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARK-TIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDC 257 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHH-HHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESC
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHH-HHHhcCCCCceEEEeCCcccCcccCCCCccEEEEecc
Confidence 479999999999999888765 5788898 666666653 3333343 3677888887765 13356999999998
Q ss_pred ccccccc-cceEEEEecccccCCceeeecChhhhcC--CHHHH----------------HHHHHHHHHHHHhhhhhhh
Q 007128 288 RIDWLQR-DGILLLELDRLLRPGGYFAYSSPEAYAQ--DEEDL----------------RIWKEMSALVERMCWRIAA 346 (617)
Q Consensus 288 l~h~~~~-~~~~L~el~RvLrPGG~lvis~p~~~~~--~~~~~----------------~~w~~l~~l~~~~gf~~v~ 346 (617)
+++|.++ ...+|+++.++|+|||++++..+..... .+... ...+++.++++++||+++.
T Consensus 258 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 335 (352)
T 3mcz_A 258 LHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGE 335 (352)
T ss_dssp GGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceee
Confidence 7776543 2569999999999999999864321110 00000 0016788999999998765
No 184
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.88 E-value=1.2e-10 Score=110.34 Aligned_cols=123 Identities=15% Similarity=0.003 Sum_probs=84.1
Q ss_pred ccCchhhHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCC--C
Q 007128 187 FHYGADKYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGI--P 261 (617)
Q Consensus 187 F~~~a~~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~--~ 261 (617)
+......+.+.+.+.+.. . .+..+|||+|||+|.++..++.. .|+++|+++.++..++. .+...++ +
T Consensus 24 ~rp~~~~~~~~~~~~l~~------~-~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~-~~~~~~~~~~ 95 (187)
T 2fhp_A 24 TRPTTDKVKESIFNMIGP------Y-FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKE-NIAITKEPEK 95 (187)
T ss_dssp SCCCCHHHHHHHHHHHCS------C-CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHH-HHHHHTCGGG
T ss_pred cCcCHHHHHHHHHHHHHh------h-cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHH-HHHHhCCCcc
Confidence 344455666677776642 1 12368999999999998877654 58999999988887774 3334444 3
Q ss_pred ccccccccccc----CCCCCccccccccccccccccccceEEEEe--cccccCCceeeecChhh
Q 007128 262 AYLGVLGTKRL----PYPSRSFELAHCSRCRIDWLQRDGILLLEL--DRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 262 ~~~~~~d~~~l----pf~~~sFDlV~~s~~l~h~~~~~~~~L~el--~RvLrPGG~lvis~p~~ 319 (617)
+.+..+|+... ++.+++||+|++... ++. ......+..+ .++|+|||++++..+..
T Consensus 96 ~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~-~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 96 FEVRKMDANRALEQFYEEKLQFDLVLLDPP-YAK-QEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp EEEEESCHHHHHHHHHHTTCCEEEEEECCC-GGG-CCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred eEEEECcHHHHHHHHHhcCCCCCEEEECCC-CCc-hhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 67777776552 233678999998765 222 2223456666 89999999999976554
No 185
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.88 E-value=9.3e-11 Score=115.94 Aligned_cols=95 Identities=13% Similarity=0.263 Sum_probs=67.2
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc-c-cchhhhhhhccc--CCcchhhhhhhh-hhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL-I-GSIHNWCEAYST--YPRTYDLLHAWT-VFSDI 533 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl-~-~~~~~~~e~~~~--~p~tfDlvh~~~-~~~~~ 533 (617)
.+|||+|||+|.++..|++. . +|+.+|. +.+++.+.++.- . ..+.-.+.++.. ++++||+|.+.. ++.|+
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~-~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~~~~~ 110 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH-Y---EVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAITILCDSLNYL 110 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT-S---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEEEECTTGGGGC
T ss_pred CeEEEecCCCCHHHHHHhhC-C---eEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEEEEeCCchhhc
Confidence 57999999999999999987 3 6777774 677777665521 0 011111122222 348999999876 88877
Q ss_pred hhcCCCcccchhhccccccCcceEEE
Q 007128 534 EKRGCSGEDLLLEMDRILRPTGFVII 559 (617)
Q Consensus 534 ~~~~c~~~~~l~Em~RiLrPgG~~ii 559 (617)
. +..++..+|.++.|+|||||.+++
T Consensus 111 ~-~~~~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 111 Q-TEADVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp C-SHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred C-CHHHHHHHHHHHHHhcCCCeEEEE
Confidence 3 112567899999999999999998
No 186
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.87 E-value=1.5e-10 Score=116.81 Aligned_cols=119 Identities=18% Similarity=0.075 Sum_probs=86.5
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC-CcccccccccccCCC---CCccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRLPYP---SRSFELAHCSR 286 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~lpf~---~~sFDlV~~s~ 286 (617)
..+|||||||+|..+..|+.. .|+++|+++.++..++. .+.+.++ ++.+..+|++.++.. +++||+|+|..
T Consensus 81 ~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a 159 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVER-AIEVLGLKGARALWGRAEVLAREAGHREAYARAVARA 159 (249)
T ss_dssp SCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHH-HHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEES
T ss_pred CCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHhCCCceEEEECcHHHhhcccccCCCceEEEECC
Confidence 468999999999998887753 59999999988887773 4444555 478888888888753 47999999754
Q ss_pred cccccccccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhhh
Q 007128 287 CRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRIA 345 (617)
Q Consensus 287 ~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~v 345 (617)
+ .+...++.++.++|||||++++..... .. ....++...++..||+..
T Consensus 160 ~-----~~~~~ll~~~~~~LkpgG~l~~~~g~~---~~---~e~~~~~~~l~~~G~~~~ 207 (249)
T 3g89_A 160 V-----APLCVLSELLLPFLEVGGAAVAMKGPR---VE---EELAPLPPALERLGGRLG 207 (249)
T ss_dssp S-----CCHHHHHHHHGGGEEEEEEEEEEECSC---CH---HHHTTHHHHHHHHTEEEE
T ss_pred c-----CCHHHHHHHHHHHcCCCeEEEEEeCCC---cH---HHHHHHHHHHHHcCCeEE
Confidence 2 223468889999999999988743211 11 113456667778888654
No 187
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.87 E-value=3e-10 Score=120.19 Aligned_cols=98 Identities=19% Similarity=0.296 Sum_probs=77.4
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC--CcccccccccccCCCCCccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRLPYPSRSFELAHCSRCR 288 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~lpf~~~sFDlV~~s~~l 288 (617)
..+|||||||+|.++..++++ .++++|+ +.++..++.+.. +.++ .+.+..+|+...|+++. |+|++..++
T Consensus 191 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~--D~v~~~~vl 266 (359)
T 1x19_A 191 VKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAA-EKGVADRMRGIAVDIYKESYPEA--DAVLFCRIL 266 (359)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHH-HTTCTTTEEEEECCTTTSCCCCC--SEEEEESCG
T ss_pred CCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHH-hcCCCCCEEEEeCccccCCCCCC--CEEEEechh
Confidence 368999999999999988865 5789999 888877764333 3333 37788888888877753 999999987
Q ss_pred cccccc-cceEEEEecccccCCceeeecC
Q 007128 289 IDWLQR-DGILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 289 ~h~~~~-~~~~L~el~RvLrPGG~lvis~ 316 (617)
++|.++ ...+|+++.++|||||++++.+
T Consensus 267 h~~~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 267 YSANEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp GGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 777542 3568999999999999998864
No 188
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.87 E-value=7.1e-10 Score=112.98 Aligned_cols=120 Identities=15% Similarity=0.128 Sum_probs=85.2
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC-CcccccccccccCCCCCccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRLPYPSRSFELAHCSRCRID 290 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h 290 (617)
.+|||+|||+|.++..++.. .|+++|+++.++..++. .+...++ ++.+..+|.... +++++||+|+++...+.
T Consensus 111 ~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~-n~~~~~~~~v~~~~~d~~~~-~~~~~fD~Iv~npPy~~ 188 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQR-NAQHLAIKNIHILQSDWFSA-LAGQQFAMIVSNPPYID 188 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHH-HHHHHTCCSEEEECCSTTGG-GTTCCEEEEEECCCCBC
T ss_pred CEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HHHHcCCCceEEEEcchhhh-cccCCccEEEECCCCCC
Confidence 58999999999999888743 69999999988887774 3444454 477777787653 44678999998732111
Q ss_pred ------------cc------------cccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhhhh
Q 007128 291 ------------WL------------QRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRIAA 346 (617)
Q Consensus 291 ------------~~------------~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~v~ 346 (617)
+. .....++.++.++|+|||++++..... . -+++.+++++.||+.+.
T Consensus 189 ~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~---~------~~~~~~~l~~~Gf~~v~ 259 (276)
T 2b3t_A 189 EQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQ---Q------GEAVRQAFILAGYHDVE 259 (276)
T ss_dssp TTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSS---C------HHHHHHHHHHTTCTTCC
T ss_pred ccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECch---H------HHHHHHHHHHCCCcEEE
Confidence 11 112347788999999999999974321 1 14677788889997543
No 189
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.87 E-value=3.2e-11 Score=121.23 Aligned_cols=97 Identities=16% Similarity=0.228 Sum_probs=72.3
Q ss_pred chhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc--ccchhhhhhhcccCC-cchhhhhhhhh
Q 007128 458 SLRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL--IGSIHNWCEAYSTYP-RTYDLLHAWTV 529 (617)
Q Consensus 458 ~~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl--~~~~~~~~e~~~~~p-~tfDlvh~~~~ 529 (617)
.-.+|||+|||+|.++..|++++. .|+.+|. +.|++.+.++ |+ +-.+..-.+.++ ++ ++||+|++..+
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~-~~~~~fD~V~~~~~ 112 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-FTDERFHIVTCRIA 112 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-SCTTCEEEEEEESC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCC-CCCCCEEEEEEhhh
Confidence 345799999999999999998865 6777774 6777776654 22 111111112233 44 89999999999
Q ss_pred hhhhhhcCCCcccchhhccccccCcceEEEecC
Q 007128 530 FSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDK 562 (617)
Q Consensus 530 ~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~ 562 (617)
+.|+. ++..+|.|+.|+|||||++++.+.
T Consensus 113 l~~~~----d~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 113 AHHFP----NPASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp GGGCS----CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hHhcC----CHHHHHHHHHHHcCCCCEEEEEEc
Confidence 99886 788999999999999999999753
No 190
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.87 E-value=4.9e-11 Score=122.94 Aligned_cols=102 Identities=11% Similarity=0.064 Sum_probs=75.1
Q ss_pred chhhHHHhhhcchhhHhhhcCC-ceEEEEeecCCC-CCceEEEeec----ccccchhhhhhhcccCCcchhhhhhhhhhh
Q 007128 458 SLRNLMDMKAHLGSFAAALKEK-DVWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWCEAYSTYPRTYDLLHAWTVFS 531 (617)
Q Consensus 458 ~~r~vLD~g~G~G~fa~~L~~~-~~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~e~~~~~p~tfDlvh~~~~~~ 531 (617)
.-.+|||+|||+|.++..|++. +. +|+.+|. +.+++.|.++ |+-..++..+.++..++++||+|++..+|.
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~~~ 148 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEYDV---NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPVDRIVSLGAFE 148 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCC---EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCCSEEEEESCGG
T ss_pred CcCEEEEeeccCcHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcCCCccEEEEcchHH
Confidence 3347999999999999999987 65 5666674 6777777665 332222222333333479999999999999
Q ss_pred hhhhc-----CCCcccchhhccccccCcceEEEecC
Q 007128 532 DIEKR-----GCSGEDLLLEMDRILRPTGFVIIRDK 562 (617)
Q Consensus 532 ~~~~~-----~c~~~~~l~Em~RiLrPgG~~ii~~~ 562 (617)
|+.++ .-++..+|.++.|+|||||.++|.+.
T Consensus 149 ~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 149 HFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp GTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred hcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 88531 12346899999999999999999775
No 191
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.86 E-value=4.3e-10 Score=112.67 Aligned_cols=116 Identities=9% Similarity=0.135 Sum_probs=85.8
Q ss_pred eeEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCCC--cccccccccccCCCCCcccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGIP--AYLGVLGTKRLPYPSRSFELAHCSRC 287 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~~--~~~~~~d~~~lpf~~~sFDlV~~s~~ 287 (617)
+.+|||+|||+|.++..+++. .|+++|+++.++..++.. +...+++ +.+...|+... +++++||+|+++.
T Consensus 94 ~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~-~~~~~~D~v~~~~- 170 (255)
T 3mb5_A 94 GDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWEN-IKWAGFDDRVTIKLKDIYEG-IEEENVDHVILDL- 170 (255)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHH-HHHHTCTTTEEEECSCGGGC-CCCCSEEEEEECS-
T ss_pred CCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHH-HHHcCCCCceEEEECchhhc-cCCCCcCEEEECC-
Confidence 368999999999999888765 489999999888777643 3334443 67778887744 7778999998632
Q ss_pred ccccccccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhh--hhhhh
Q 007128 288 RIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMC--WRIAA 346 (617)
Q Consensus 288 l~h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~g--f~~v~ 346 (617)
.++..++.++.++|+|||++++..+... ...++.+.+++.| |..+.
T Consensus 171 -----~~~~~~l~~~~~~L~~gG~l~~~~~~~~--------~~~~~~~~l~~~g~~f~~~~ 218 (255)
T 3mb5_A 171 -----PQPERVVEHAAKALKPGGFFVAYTPCSN--------QVMRLHEKLREFKDYFMKPR 218 (255)
T ss_dssp -----SCGGGGHHHHHHHEEEEEEEEEEESSHH--------HHHHHHHHHHHTGGGBSCCE
T ss_pred -----CCHHHHHHHHHHHcCCCCEEEEEECCHH--------HHHHHHHHHHHcCCCccccE
Confidence 2335689999999999999999754431 1355677778888 86543
No 192
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.86 E-value=4.6e-11 Score=123.94 Aligned_cols=99 Identities=14% Similarity=0.143 Sum_probs=74.2
Q ss_pred hhhHHHhhhcchhhHhhhcCC-ceEEEEeecCCC-CCceEEEeec----ccccchhhhhhhcccCCcchhhhhhhhhhhh
Q 007128 459 LRNLMDMKAHLGSFAAALKEK-DVWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWCEAYSTYPRTYDLLHAWTVFSD 532 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~-~~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~e~~~~~p~tfDlvh~~~~~~~ 532 (617)
-.+|||+|||+|.++..|++. +. .|+.+|. +.+++.+.++ |+...+...+.++..+|++||+|++..+|.|
T Consensus 91 ~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~l~~ 167 (318)
T 2fk8_A 91 GMTLLDIGCGWGTTMRRAVERFDV---NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVSIEAFEH 167 (318)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEEEESCGGG
T ss_pred cCEEEEEcccchHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEEEEeChHHh
Confidence 347999999999999999987 66 5666664 5777777665 3322222223344445689999999999998
Q ss_pred hhhcCCCcccchhhccccccCcceEEEecC
Q 007128 533 IEKRGCSGEDLLLEMDRILRPTGFVIIRDK 562 (617)
Q Consensus 533 ~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~ 562 (617)
+.. .++..+|.|+.|+|||||.+++.+.
T Consensus 168 ~~~--~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 168 FGH--ENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp TCG--GGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred cCH--HHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 832 2678999999999999999999765
No 193
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.86 E-value=5.3e-10 Score=107.93 Aligned_cols=137 Identities=15% Similarity=0.125 Sum_probs=82.3
Q ss_pred hhHHHhhhcchhhHhhhcCC--ceEEEEeecCCC-CCceEEEeec----cc-cc-chhhhhhhccc---CCcchhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDG-PNTLKLIYDR----GL-IG-SIHNWCEAYST---YPRTYDLLHAW 527 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~-~~~l~~~~~r----gl-~~-~~~~~~e~~~~---~p~tfDlvh~~ 527 (617)
.+|||+|||+|.++..|++. +. +|+.+|. +.+++.+.++ |+ +- ...|..+.++. .+++||+|.++
T Consensus 32 ~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~n 108 (215)
T 4dzr_A 32 TRVIDVGTGSGCIAVSIALACPGV---SVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVSN 108 (215)
T ss_dssp EEEEEEESSBCHHHHHHHHHCTTE---EEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEEC
T ss_pred CEEEEecCCHhHHHHHHHHhCCCC---eEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEEC
Confidence 47999999999999999986 44 5666664 6777777655 21 11 12233333332 22799999985
Q ss_pred hhh------hhhhhc------CCC----------cccchhhccccccCcce-EEEecChhHHHHHHHhhh--hccccccc
Q 007128 528 TVF------SDIEKR------GCS----------GEDLLLEMDRILRPTGF-VIIRDKQSVVDFVKKYLR--ALNWEAVA 582 (617)
Q Consensus 528 ~~~------~~~~~~------~c~----------~~~~l~Em~RiLrPgG~-~ii~~~~~~~~~~~~~~~--~~~w~~~~ 582 (617)
--| .++... ... +..++.++.|+|||||+ +++..+....+++.+++. ..+|..+
T Consensus 109 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~~~gf~~~- 187 (215)
T 4dzr_A 109 PPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEVARLFAPWRERGFRV- 187 (215)
T ss_dssp CCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCHHHHHHHTGGGGGGTEEC-
T ss_pred CCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCccHHHHHHHHHHhhcCCceE-
Confidence 333 221110 001 16788999999999999 777777777888999999 8888775
Q ss_pred ccccCCCCCCCCCCeEEEEEEec
Q 007128 583 TTADASSDSDKDGDEVVFIVQKK 605 (617)
Q Consensus 583 ~~~~~~~~~~~~~~~~~l~~~K~ 605 (617)
.+.. . ..+..++++++|+
T Consensus 188 ~~~~--~---~~~~~r~~~~~~~ 205 (215)
T 4dzr_A 188 RKVK--D---LRGIDRVIAVTRE 205 (215)
T ss_dssp CEEE--C---TTSCEEEEEEEEC
T ss_pred EEEE--e---cCCCEEEEEEEEc
Confidence 3332 1 1345889998874
No 194
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.85 E-value=8.6e-11 Score=113.48 Aligned_cols=96 Identities=10% Similarity=0.190 Sum_probs=74.0
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCcccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDW 291 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~ 291 (617)
.+|||+|||+|.++..++.. .|+++|+++.+++.++. .+...|+...+...|.... .+.++||+|++..++ |+
T Consensus 51 ~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~-~~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k~L-Hl 127 (200)
T 3fzg_A 51 SSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSS-IIGKLKTTIKYRFLNKESD-VYKGTYDVVFLLKML-PV 127 (200)
T ss_dssp SEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHH-HHHHSCCSSEEEEECCHHH-HTTSEEEEEEEETCH-HH
T ss_pred CeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHH-HHHhcCCCccEEEeccccc-CCCCCcChhhHhhHH-Hh
Confidence 58999999999999988443 69999999999988874 4555566544444565444 355789999988775 45
Q ss_pred ccccceEEEEecccccCCceeee
Q 007128 292 LQRDGILLLELDRLLRPGGYFAY 314 (617)
Q Consensus 292 ~~~~~~~L~el~RvLrPGG~lvi 314 (617)
.++....+.++.+.|+|||+++-
T Consensus 128 L~~~~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 128 LKQQDVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp HHHTTCCHHHHHHTCEEEEEEEE
T ss_pred hhhhHHHHHHHHHHhCCCCEEEE
Confidence 56667788899999999998875
No 195
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.85 E-value=1.1e-10 Score=116.78 Aligned_cols=126 Identities=11% Similarity=0.087 Sum_probs=79.0
Q ss_pred ceeEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCCCcccccccccccC---CCCCcccccccc
Q 007128 214 RLRTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLP---YPSRSFELAHCS 285 (617)
Q Consensus 214 ~~~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lp---f~~~sFDlV~~s 285 (617)
++.+|||+|||+|.++..+++. .|+++|+++.++.... +.+.++ .++.+..+|+.... ...++||+|++.
T Consensus 76 ~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~-~~a~~r-~nv~~i~~Da~~~~~~~~~~~~~D~I~~d 153 (232)
T 3id6_C 76 KGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELL-LVAQRR-PNIFPLLADARFPQSYKSVVENVDVLYVD 153 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHH-HHHHHC-TTEEEEECCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHH-HHhhhc-CCeEEEEcccccchhhhccccceEEEEec
Confidence 3479999999999999888764 5999999997764432 344443 46777777876532 124689999976
Q ss_pred ccccccccccceEEEEecccccCCceeeecChhhh---cCCHHHHHHHHHHHHHHHHhhhhhhh
Q 007128 286 RCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAY---AQDEEDLRIWKEMSALVERMCWRIAA 346 (617)
Q Consensus 286 ~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~~~---~~~~~~~~~w~~l~~l~~~~gf~~v~ 346 (617)
.. . ......++..+.++|||||+|+++..... ...++ +.+++....+++.||+++.
T Consensus 154 ~a-~--~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~--e~~~~~~~~L~~~gf~~~~ 212 (232)
T 3id6_C 154 IA-Q--PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPK--EIYKTEVEKLENSNFETIQ 212 (232)
T ss_dssp CC-C--TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSS--SSTTHHHHHHHHTTEEEEE
T ss_pred CC-C--hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHH--HHHHHHHHHHHHCCCEEEE
Confidence 43 2 22212244556669999999999742211 11111 1123455566677887654
No 196
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.84 E-value=4.7e-10 Score=116.93 Aligned_cols=109 Identities=12% Similarity=0.087 Sum_probs=80.4
Q ss_pred hHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc--h---hhhhccCCCccchhhhHHHHHhCC-Cccccc
Q 007128 193 KYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS--D---VITMSLAPNDVHQNQIQFALERGI-PAYLGV 266 (617)
Q Consensus 193 ~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~--~---V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~ 266 (617)
...+.+.+.+.. .++ .+|||||||+|.++..+++. . |+++|+++.++..++.. +...++ ++.+..
T Consensus 62 ~~~~~l~~~l~~------~~~--~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~-~~~~g~~~v~~~~ 132 (317)
T 1dl5_A 62 SLMALFMEWVGL------DKG--MRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRN-VERLGIENVIFVC 132 (317)
T ss_dssp HHHHHHHHHTTC------CTT--CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHH-HHHTTCCSEEEEE
T ss_pred HHHHHHHHhcCC------CCc--CEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCeEEEE
Confidence 344556666654 333 68999999999999888764 3 99999999888777643 333444 477788
Q ss_pred ccccccCCCCCccccccccccccccccccceEEEEecccccCCceeeecCh
Q 007128 267 LGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 267 ~d~~~lpf~~~sFDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p 317 (617)
+|....+.++++||+|++..++.|.. .++.++|||||+++++..
T Consensus 133 ~d~~~~~~~~~~fD~Iv~~~~~~~~~-------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 133 GDGYYGVPEFSPYDVIFVTVGVDEVP-------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp SCGGGCCGGGCCEEEEEECSBBSCCC-------HHHHHHEEEEEEEEEEBC
T ss_pred CChhhccccCCCeEEEEEcCCHHHHH-------HHHHHhcCCCcEEEEEEC
Confidence 88877655667899999887754432 468899999999999743
No 197
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.84 E-value=7e-11 Score=115.35 Aligned_cols=95 Identities=15% Similarity=0.263 Sum_probs=71.1
Q ss_pred chhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc---ccchhhhhhhcccCC-cchhhhhhhhhhhh
Q 007128 458 SLRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL---IGSIHNWCEAYSTYP-RTYDLLHAWTVFSD 532 (617)
Q Consensus 458 ~~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl---~~~~~~~~e~~~~~p-~tfDlvh~~~~~~~ 532 (617)
.-.+|||+|||+|.++..|++.+. +++.+|. +.+++.+.++.. .+.+.+.. ..++ ++||+|++..++.|
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~fD~v~~~~~l~~ 105 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENGT---RVSGIEAFPEAAEQAKEKLDHVVLGDIETMD---MPYEEEQFDCVIFGDVLEH 105 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTTC---EEEEEESSHHHHHHHHTTSSEEEESCTTTCC---CCSCTTCEEEEEEESCGGG
T ss_pred CCCcEEEeCCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCCcEEEcchhhcC---CCCCCCccCEEEECChhhh
Confidence 335799999999999999999865 5666664 566665555432 22222111 2244 89999999999998
Q ss_pred hhhcCCCcccchhhccccccCcceEEEecC
Q 007128 533 IEKRGCSGEDLLLEMDRILRPTGFVIIRDK 562 (617)
Q Consensus 533 ~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~ 562 (617)
+. +...+|.++.|+|||||++++..+
T Consensus 106 ~~----~~~~~l~~~~~~L~~gG~l~~~~~ 131 (230)
T 3cc8_A 106 LF----DPWAVIEKVKPYIKQNGVILASIP 131 (230)
T ss_dssp SS----CHHHHHHHTGGGEEEEEEEEEEEE
T ss_pred cC----CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 86 678999999999999999999864
No 198
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.84 E-value=8.1e-11 Score=117.79 Aligned_cols=94 Identities=14% Similarity=0.209 Sum_probs=70.1
Q ss_pred hhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecc--c---ccchhhhhhhcccCC-cchhhhhhhhhhh
Q 007128 459 LRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRG--L---IGSIHNWCEAYSTYP-RTYDLLHAWTVFS 531 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rg--l---~~~~~~~~e~~~~~p-~tfDlvh~~~~~~ 531 (617)
-.+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.++- . +-.++.-.+.++ ++ ++||+|++..+++
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIARGY---RYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP-LPDESVHGVIVVHLWH 115 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTTTC---EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCC-SCTTCEEEEEEESCGG
T ss_pred CCEEEEeCCcCCHHHHHHHHCCC---EEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCC-CCCCCeeEEEECCchh
Confidence 34799999999999999999876 5666663 57777666551 1 111111112333 33 8999999999999
Q ss_pred hhhhcCCCcccchhhccccccCcceEEEe
Q 007128 532 DIEKRGCSGEDLLLEMDRILRPTGFVIIR 560 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~RiLrPgG~~ii~ 560 (617)
|+. +...+|.|+.|+|||||++++.
T Consensus 116 ~~~----~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 116 LVP----DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GCT----THHHHHHHHHHHEEEEEEEEEE
T ss_pred hcC----CHHHHHHHHHHHCCCCcEEEEE
Confidence 876 7889999999999999999986
No 199
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.83 E-value=2.8e-10 Score=116.46 Aligned_cols=102 Identities=13% Similarity=0.077 Sum_probs=74.7
Q ss_pred eEEEeecccc---ccccccccc----chhhhhccCCCccchhhhHHHHHhCCCcccccccccccC-----------CCCC
Q 007128 216 RTVLDVGCGV---ASFGAYLLS----SDVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLP-----------YPSR 277 (617)
Q Consensus 216 ~~VLDVGCG~---G~~~~~L~~----~~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lp-----------f~~~ 277 (617)
.+|||||||+ |.++..+.+ ..|+++|+++.++..++.... ...++.+..+|+.+.+ ++..
T Consensus 79 ~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLA--KDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHT--TCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcC--CCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 6899999999 987665543 369999999988887764432 1235677777875421 3334
Q ss_pred ccccccccccccccccc-cceEEEEecccccCCceeeecChhh
Q 007128 278 SFELAHCSRCRIDWLQR-DGILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 278 sFDlV~~s~~l~h~~~~-~~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
+||+|++..+++|+.+. ...+|+++.++|+|||+|+++....
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 89999988775444432 4579999999999999999986554
No 200
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.83 E-value=3.9e-11 Score=113.55 Aligned_cols=113 Identities=18% Similarity=0.126 Sum_probs=79.1
Q ss_pred ceeEEEeecccccccccccccchhhhhccCCCccchhhhHHHHHhCCCcccccccccccCC---CCCccccccccccccc
Q 007128 214 RLRTVLDVGCGVASFGAYLLSSDVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPY---PSRSFELAHCSRCRID 290 (617)
Q Consensus 214 ~~~~VLDVGCG~G~~~~~L~~~~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf---~~~sFDlV~~s~~l~h 290 (617)
++.+|||||||. + ++|+++.|+..++.+.. .++.+.++|+..+++ ++++||+|+|+.+++|
T Consensus 12 ~g~~vL~~~~g~-----------v-~vD~s~~ml~~a~~~~~----~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~ 75 (176)
T 2ld4_A 12 AGQFVAVVWDKS-----------S-PVEALKGLVDKLQALTG----NEGRVSVENIKQLLQSAHKESSFDIILSGLVPGS 75 (176)
T ss_dssp TTSEEEEEECTT-----------S-CHHHHHHHHHHHHHHTT----TTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTC
T ss_pred CCCEEEEecCCc-----------e-eeeCCHHHHHHHHHhcc----cCcEEEEechhcCccccCCCCCEeEEEECChhhh
Confidence 347899999986 2 37777777665553221 136778889988887 7899999999887554
Q ss_pred cccccceEEEEecccccCCceeeecChhhhcCC-HHHHHHHHHHHHHHHHhhh
Q 007128 291 WLQRDGILLLELDRLLRPGGYFAYSSPEAYAQD-EEDLRIWKEMSALVERMCW 342 (617)
Q Consensus 291 ~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~-~~~~~~w~~l~~l~~~~gf 342 (617)
...+...++++++|+|||||+|++..+...... .......+++.+.++++||
T Consensus 76 ~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 76 TTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp CCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred cccCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 426667899999999999999999654321110 0000012678889999999
No 201
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.82 E-value=6.2e-11 Score=120.95 Aligned_cols=113 Identities=18% Similarity=0.275 Sum_probs=80.2
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----ccccchhhhhhhcccC--Ccchhhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWCEAYSTY--PRTYDLLHAWTVFSD 532 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~e~~~~~--p~tfDlvh~~~~~~~ 532 (617)
.+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.++ |+ .+...+.++..+ +++||+|.+..+|.|
T Consensus 122 ~~vLD~GcG~G~~~~~l~~~g~---~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 122 CKVLDLGCGQGRNSLYLSLLGY---DVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANIQENYDFIVSTVVFMF 196 (286)
T ss_dssp CEEEEESCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCCCSCEEEEEECSSGGG
T ss_pred CcEEEECCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccccCCccEEEEccchhh
Confidence 4699999999999999999877 5666664 5666665554 32 112222222222 589999999999998
Q ss_pred hhhcCCCcccchhhccccccCcceEEEecChh--------------HHHHHHHhhhhcccccc
Q 007128 533 IEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS--------------VVDFVKKYLRALNWEAV 581 (617)
Q Consensus 533 ~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~--------------~~~~~~~~~~~~~w~~~ 581 (617)
+... +...+|.++.|+|||||.++|..... ..+++++++.. |+.+
T Consensus 197 ~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~ 255 (286)
T 3m70_A 197 LNRE--RVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFL 255 (286)
T ss_dssp SCGG--GHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEE
T ss_pred CCHH--HHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEE
Confidence 7422 56689999999999999987754322 24567888777 7764
No 202
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.82 E-value=7e-10 Score=108.04 Aligned_cols=110 Identities=15% Similarity=0.149 Sum_probs=76.3
Q ss_pred hHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCC-Cccccc
Q 007128 193 KYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGI-PAYLGV 266 (617)
Q Consensus 193 ~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~ 266 (617)
.....+.+.+.. .. +.+|||||||+|.++..+++. .|+++|+++.++..++.... ..+. ++.+..
T Consensus 64 ~~~~~~~~~~~~------~~--~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~v~~~~ 134 (215)
T 2yxe_A 64 HMVGMMCELLDL------KP--GMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLR-KLGYDNVIVIV 134 (215)
T ss_dssp HHHHHHHHHTTC------CT--TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHH-HHTCTTEEEEE
T ss_pred HHHHHHHHhhCC------CC--CCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHH-HcCCCCeEEEE
Confidence 344455555544 33 368999999999998888763 48899999888777764333 3333 466666
Q ss_pred ccccccCCCCCccccccccccccccccccceEEEEecccccCCceeeecChh
Q 007128 267 LGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 267 ~d~~~lpf~~~sFDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
.|.......+++||+|++..++.+.. .++.++|||||++++..+.
T Consensus 135 ~d~~~~~~~~~~fD~v~~~~~~~~~~-------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 135 GDGTLGYEPLAPYDRIYTTAAGPKIP-------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp SCGGGCCGGGCCEEEEEESSBBSSCC-------HHHHHTEEEEEEEEEEESS
T ss_pred CCcccCCCCCCCeeEEEECCchHHHH-------HHHHHHcCCCcEEEEEECC
Confidence 77643222257899999887754432 4789999999999997543
No 203
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.82 E-value=1.1e-10 Score=114.47 Aligned_cols=115 Identities=16% Similarity=0.202 Sum_probs=83.2
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc-------ccchhhhhhhcccCCcchhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL-------IGSIHNWCEAYSTYPRTYDLLHAW 527 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl-------~~~~~~~~e~~~~~p~tfDlvh~~ 527 (617)
.+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.++ ++ +-.+..-.+.++.-+++||+|.+.
T Consensus 32 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 32 DEILDIGCGSGKISLELASKGY---SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CeEEEECCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 3699999999999999999876 5666663 5666655553 22 111111112222113899999999
Q ss_pred hhhhhhhhcCCCcc---cchhhccccccCcceEEEecCh-----------------------------------------
Q 007128 528 TVFSDIEKRGCSGE---DLLLEMDRILRPTGFVIIRDKQ----------------------------------------- 563 (617)
Q Consensus 528 ~~~~~~~~~~c~~~---~~l~Em~RiLrPgG~~ii~~~~----------------------------------------- 563 (617)
.++.|+. +.+ .+|.++.|+|||||.+++.+..
T Consensus 109 ~~l~~~~----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (235)
T 3sm3_A 109 AFLTSVP----DPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHH 184 (235)
T ss_dssp SCGGGCC----CHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEEC
T ss_pred chhhcCC----CHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEe
Confidence 9999876 555 8999999999999999998541
Q ss_pred hHHHHHHHhhhhcccccc
Q 007128 564 SVVDFVKKYLRALNWEAV 581 (617)
Q Consensus 564 ~~~~~~~~~~~~~~w~~~ 581 (617)
-..+++++++++.+|+.+
T Consensus 185 ~~~~~l~~ll~~aGf~~~ 202 (235)
T 3sm3_A 185 FTEKELVFLLTDCRFEID 202 (235)
T ss_dssp BCHHHHHHHHHTTTEEEE
T ss_pred CCHHHHHHHHHHcCCEEE
Confidence 136789999999999986
No 204
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.82 E-value=2.2e-10 Score=119.06 Aligned_cols=126 Identities=13% Similarity=0.147 Sum_probs=85.7
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHH----HhCCCcccccccccccCC--CCCccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFAL----ERGIPAYLGVLGTKRLPY--PSRSFELAHC 284 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~----~rg~~~~~~~~d~~~lpf--~~~sFDlV~~ 284 (617)
+.+|||||||+|.++..+++. .|+++|+++.++..++..+.. ....++.+..+|...++. ++++||+|++
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~ 175 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVII 175 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEEE
Confidence 468999999999999988765 589999999887776643321 112356777788776654 4689999998
Q ss_pred ccccccccccc----ceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhhh
Q 007128 285 SRCRIDWLQRD----GILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRIA 345 (617)
Q Consensus 285 s~~l~h~~~~~----~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~v 345 (617)
... .++.... ..+++++.|+|||||++++...... ... .....+.+.+++.||..+
T Consensus 176 d~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~-~~~---~~~~~~~~~l~~~GF~~v 235 (304)
T 3bwc_A 176 DTT-DPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIW-LDL---ELIEKMSRFIRETGFASV 235 (304)
T ss_dssp ECC----------CCHHHHHHHHHHEEEEEEEEEEECCTT-TCH---HHHHHHHHHHHHHTCSEE
T ss_pred CCC-CccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcc-cch---HHHHHHHHHHHhCCCCcE
Confidence 644 2332211 3578899999999999999643321 121 224667788888888543
No 205
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.82 E-value=7e-10 Score=117.28 Aligned_cols=115 Identities=12% Similarity=0.169 Sum_probs=83.3
Q ss_pred hHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCC--Ccccccc
Q 007128 193 KYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGI--PAYLGVL 267 (617)
Q Consensus 193 ~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~ 267 (617)
.|.+.+.+.+.. .. +.+|||||||+|.++..+++. .|+++|+++ ++..++ +.+...++ ++.+..+
T Consensus 37 ~y~~~i~~~l~~------~~--~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~-~~~~~~~l~~~v~~~~~ 106 (348)
T 2y1w_A 37 TYQRAILQNHTD------FK--DKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAE-VLVKSNNLTDRIVVIPG 106 (348)
T ss_dssp HHHHHHHHTGGG------TT--TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHH-HHHHHTTCTTTEEEEES
T ss_pred HHHHHHHhcccc------CC--cCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHH-HHHHHcCCCCcEEEEEc
Confidence 455566655543 22 368999999999999888765 589999996 665554 34444454 4778888
Q ss_pred cccccCCCCCccccccccccccccccc-cceEEEEecccccCCceeeecChh
Q 007128 268 GTKRLPYPSRSFELAHCSRCRIDWLQR-DGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 268 d~~~lpf~~~sFDlV~~s~~l~h~~~~-~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
|...++++ ++||+|++.....|+... ....+.++.++|||||++++....
T Consensus 107 d~~~~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (348)
T 2y1w_A 107 KVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGD 157 (348)
T ss_dssp CTTTCCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCEEE
T ss_pred chhhCCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEecCc
Confidence 88888776 589999988765665433 235677899999999999986443
No 206
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.82 E-value=2.2e-10 Score=122.48 Aligned_cols=93 Identities=12% Similarity=0.099 Sum_probs=72.3
Q ss_pred eeEEEeeccc------ccccccccccc-----hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCC------CC
Q 007128 215 LRTVLDVGCG------VASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYP------SR 277 (617)
Q Consensus 215 ~~~VLDVGCG------~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~------~~ 277 (617)
..+||||||| +|..+..++.. .|+++|+++.+. ....++.+.++|+.++||. ++
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~~~l~~~d~ 287 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEFLDRIARRYG 287 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEecccccchhhhhhcccC
Confidence 3689999999 66666555543 599999999762 1234678889999998887 78
Q ss_pred ccccccccccccccccccceEEEEecccccCCceeeecChh
Q 007128 278 SFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 278 sFDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
+||+|+|..+ |+..+...+|+++.|+|||||++++.+..
T Consensus 288 sFDlVisdgs--H~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 288 PFDIVIDDGS--HINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp CEEEEEECSC--CCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred CccEEEECCc--ccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 9999998643 44445567999999999999999997654
No 207
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.82 E-value=2.5e-10 Score=106.16 Aligned_cols=91 Identities=15% Similarity=0.183 Sum_probs=69.6
Q ss_pred eEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCCCcccccccccccC--------CCCCccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLP--------YPSRSFELA 282 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lp--------f~~~sFDlV 282 (617)
.+|||+|||+|.++..+++. .++++|+++ ++.. .++.+..+|....+ +++++||+|
T Consensus 24 ~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i 92 (180)
T 1ej0_A 24 MTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------VGVDFLQGDFRDELVMKALLERVGDSKVQVV 92 (180)
T ss_dssp CEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------TTEEEEESCTTSHHHHHHHHHHHTTCCEEEE
T ss_pred CeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------CcEEEEEcccccchhhhhhhccCCCCceeEE
Confidence 68999999999998888754 588999998 6532 24556677777766 677899999
Q ss_pred ccccccccccccc-----------ceEEEEecccccCCceeeecChh
Q 007128 283 HCSRCRIDWLQRD-----------GILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 283 ~~s~~l~h~~~~~-----------~~~L~el~RvLrPGG~lvis~p~ 318 (617)
+++.. +++.... ..++.++.++|+|||.++++.+.
T Consensus 93 ~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 93 MSDMA-PNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp EECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred EECCC-ccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 98765 3333222 46899999999999999997653
No 208
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.81 E-value=1.3e-10 Score=109.79 Aligned_cols=118 Identities=15% Similarity=0.050 Sum_probs=79.1
Q ss_pred hhHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCC--Cccccc
Q 007128 192 DKYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGI--PAYLGV 266 (617)
Q Consensus 192 ~~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~ 266 (617)
....+.+.+.+.. . .. ..+|||+|||+|.++..+++. .|+++|+++.++..++. .+...++ ++.+..
T Consensus 16 ~~~~~~~~~~l~~----~-~~--~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~-~~~~~~~~~~~~~~~ 87 (177)
T 2esr_A 16 DKVRGAIFNMIGP----Y-FN--GGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQD-NIIMTKAENRFTLLK 87 (177)
T ss_dssp --CHHHHHHHHCS----C-CC--SCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHH-HHHTTTCGGGEEEEC
T ss_pred HHHHHHHHHHHHh----h-cC--CCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHH-HHHHcCCCCceEEEE
Confidence 3444555566542 0 22 358999999999999888765 58999999988877763 3444444 366777
Q ss_pred ccccc-cCCCCCccccccccccccccccccceEEEEec--ccccCCceeeecChhh
Q 007128 267 LGTKR-LPYPSRSFELAHCSRCRIDWLQRDGILLLELD--RLLRPGGYFAYSSPEA 319 (617)
Q Consensus 267 ~d~~~-lpf~~~sFDlV~~s~~l~h~~~~~~~~L~el~--RvLrPGG~lvis~p~~ 319 (617)
+|+.. ++..+++||+|++.... +. ......+..+. ++|+|||++++..+..
T Consensus 88 ~d~~~~~~~~~~~fD~i~~~~~~-~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 88 MEAERAIDCLTGRFDLVFLDPPY-AK-ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp SCHHHHHHHBCSCEEEEEECCSS-HH-HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CcHHHhHHhhcCCCCEEEECCCC-Cc-chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 77766 45445679999987542 21 12234555555 9999999999976544
No 209
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.81 E-value=8.9e-11 Score=118.95 Aligned_cols=111 Identities=15% Similarity=0.278 Sum_probs=74.9
Q ss_pred HHHHhhccccCccchhhHHHhhhcchhhHhhhcCC--ceEEEEeecCCC-CCceEEEeec----cc--ccchhhhhhhcc
Q 007128 445 SYWNLLSPKIQSNSLRNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDG-PNTLKLIYDR----GL--IGSIHNWCEAYS 515 (617)
Q Consensus 445 ~y~~~l~~~i~~~~~r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~-~~~l~~~~~r----gl--~~~~~~~~e~~~ 515 (617)
.+...+........-.+|||+|||+|.++..|++. +. .|+.+|. +.+++.+.++ |+ +-.+..-.+.++
T Consensus 24 ~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~ 100 (276)
T 3mgg_A 24 TLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDA---EITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLP 100 (276)
T ss_dssp HHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCC
T ss_pred HHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCC
Confidence 33444433232334457999999999999999876 45 4555553 5666655554 22 111111112233
Q ss_pred cCCcchhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecC
Q 007128 516 TYPRTYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDK 562 (617)
Q Consensus 516 ~~p~tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~ 562 (617)
.-+++||+|++..++.|+. ++..+|.++.|+|||||++++.+.
T Consensus 101 ~~~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 101 FEDSSFDHIFVCFVLEHLQ----SPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp SCTTCEEEEEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCeeEEEEechhhhcC----CHHHHHHHHHHHcCCCcEEEEEEc
Confidence 2238999999999999886 778999999999999999999763
No 210
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.81 E-value=7.4e-10 Score=112.48 Aligned_cols=98 Identities=19% Similarity=0.150 Sum_probs=76.9
Q ss_pred eEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHH-h--CCCcccccccccccCCCCCcccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALE-R--GIPAYLGVLGTKRLPYPSRSFELAHCSRC 287 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~-r--g~~~~~~~~d~~~lpf~~~sFDlV~~s~~ 287 (617)
.+|||+|||+|.++..|++. .|+++|+++.++..++...... . ..++.+..+|+...++++++||+|++..
T Consensus 101 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~- 179 (280)
T 1i9g_A 101 ARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVLDM- 179 (280)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEEES-
T ss_pred CEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEECC-
Confidence 68999999999999888763 4899999998887776444433 1 2357788889888888888999998632
Q ss_pred ccccccccceEEEEecccccCCceeeecChhh
Q 007128 288 RIDWLQRDGILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 288 l~h~~~~~~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
.++..++.++.++|+|||++++..+..
T Consensus 180 -----~~~~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 180 -----LAPWEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp -----SCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred -----cCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 233578999999999999999986643
No 211
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.81 E-value=4.9e-10 Score=110.16 Aligned_cols=95 Identities=18% Similarity=0.148 Sum_probs=72.0
Q ss_pred eeEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhC------CCcccccccccccCCCCCcccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERG------IPAYLGVLGTKRLPYPSRSFELAH 283 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg------~~~~~~~~d~~~lpf~~~sFDlV~ 283 (617)
+.+|||||||+|.++..|++. .|+++|+++.++..++.... ..+ .++.+..+|....+..+++||+|+
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~ 156 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVR-KDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIH 156 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHH-HHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH-hhcccccCCCcEEEEECCcccCcccCCCcCEEE
Confidence 368999999999998888753 58999999988877764333 322 256777778776665667899999
Q ss_pred ccccccccccccceEEEEecccccCCceeeecCh
Q 007128 284 CSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 284 ~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p 317 (617)
+...+. .++.++.++|||||+++++..
T Consensus 157 ~~~~~~-------~~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 157 VGAAAP-------VVPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp ECSBBS-------SCCHHHHHTEEEEEEEEEEES
T ss_pred ECCchH-------HHHHHHHHhcCCCcEEEEEEe
Confidence 776532 345688999999999999754
No 212
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.81 E-value=2.7e-10 Score=110.93 Aligned_cols=120 Identities=13% Similarity=-0.036 Sum_probs=83.0
Q ss_pred hhhHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCC-Cccccc
Q 007128 191 ADKYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGI-PAYLGV 266 (617)
Q Consensus 191 a~~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~ 266 (617)
...+.+.+.+.+.. . .+..+|||+|||+|.++..++.+ .|+++|+++.++..++. .+...++ ++.+..
T Consensus 38 ~~~~~~~l~~~l~~------~-~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~-~~~~~~~~~v~~~~ 109 (202)
T 2fpo_A 38 TDRVRETLFNWLAP------V-IVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIK-NLATLKAGNARVVN 109 (202)
T ss_dssp CHHHHHHHHHHHHH------H-HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHH-HHHHTTCCSEEEEC
T ss_pred HHHHHHHHHHHHHh------h-cCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHH-HHHHcCCCcEEEEE
Confidence 34455555555542 1 01258999999999999876554 58999999998888874 4444454 677888
Q ss_pred ccccc-cCCCCCccccccccccccccccccceEEEEec--ccccCCceeeecChhhh
Q 007128 267 LGTKR-LPYPSRSFELAHCSRCRIDWLQRDGILLLELD--RLLRPGGYFAYSSPEAY 320 (617)
Q Consensus 267 ~d~~~-lpf~~~sFDlV~~s~~l~h~~~~~~~~L~el~--RvLrPGG~lvis~p~~~ 320 (617)
+|+.. ++..+++||+|++... ++. .....++.++. |+|+|||+++++.....
T Consensus 110 ~D~~~~~~~~~~~fD~V~~~~p-~~~-~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~ 164 (202)
T 2fpo_A 110 SNAMSFLAQKGTPHNIVFVDPP-FRR-GLLEETINLLEDNGWLADEALIYVESEVEN 164 (202)
T ss_dssp SCHHHHHSSCCCCEEEEEECCS-SST-TTHHHHHHHHHHTTCEEEEEEEEEEEEGGG
T ss_pred CCHHHHHhhcCCCCCEEEECCC-CCC-CcHHHHHHHHHhcCccCCCcEEEEEECCCc
Confidence 88766 5666779999998754 332 22234666664 56999999999865543
No 213
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.80 E-value=9.5e-11 Score=119.28 Aligned_cols=127 Identities=11% Similarity=0.070 Sum_probs=83.6
Q ss_pred hhhhhHHHHHHHHHHHHHhhcc------------ccCccchhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEE
Q 007128 431 MFEKDTESWRNRVDSYWNLLSP------------KIQSNSLRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKL 497 (617)
Q Consensus 431 ~F~~D~~~Wk~~V~~y~~~l~~------------~i~~~~~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~ 497 (617)
.|...++.|......|++.... .+....-.+|||+|||+|.++..|++++. .|+.+|. +.|++.
T Consensus 6 ~~~s~a~~wd~~a~~f~~~~~~~~~~~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~---~V~gvD~S~~ml~~ 82 (261)
T 3iv6_A 6 ITNSKAEAWELIGNQFWTIGRVAARPSDRENDIFLENIVPGSTVAVIGASTRFLIEKALERGA---SVTVFDFSQRMCDD 82 (261)
T ss_dssp TTCTTHHHHHTTTTHHHHTSCGGGSCCHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTC---EEEEEESCHHHHHH
T ss_pred hhhhhhhHHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCC---EEEEEECCHHHHHH
Confidence 3455556666555555543221 11122234699999999999999999887 5677774 688888
Q ss_pred Eeeccc----ccchhhhhhhc-ccCCcchhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecCh
Q 007128 498 IYDRGL----IGSIHNWCEAY-STYPRTYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 498 ~~~rgl----~~~~~~~~e~~-~~~p~tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
+.++.- -+.+.+..... ...+.+||+|.|+.+++|+... +...+|.+|.|+| |||.++++-..
T Consensus 83 Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~--~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 83 LAEALADRCVTIDLLDITAEIPKELAGHFDFVLNDRLINRFTTE--EARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp HHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCHH--HHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred HHHHHHhccceeeeeecccccccccCCCccEEEEhhhhHhCCHH--HHHHHHHHHHHhC-cCcEEEEEecc
Confidence 776632 11111111100 1224799999999999876422 4667999999999 99999998654
No 214
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.80 E-value=2.3e-10 Score=115.59 Aligned_cols=116 Identities=14% Similarity=0.137 Sum_probs=83.1
Q ss_pred hhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----ccccchhhhh---hhcccCCcchhhhhhhhhh
Q 007128 459 LRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWC---EAYSTYPRTYDLLHAWTVF 530 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~---e~~~~~p~tfDlvh~~~~~ 530 (617)
-.+|||+|||+|.++..|++.+. .+|+.+|. +.+++.+.++ |+-..+...+ +.++.-+++||+|+|..++
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~ 124 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGHVT--GQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAI 124 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTTCS--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCG
T ss_pred CCEEEEeCCCCCHHHHHHHhccC--CEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCc
Confidence 34699999999999999998743 14555563 5676666555 3311122122 2333113899999999999
Q ss_pred hhhhhcCCCcccchhhccccccCcceEEEecCh---------------------hHHHHHHHhhhhcccccc
Q 007128 531 SDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ---------------------SVVDFVKKYLRALNWEAV 581 (617)
Q Consensus 531 ~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~---------------------~~~~~~~~~~~~~~w~~~ 581 (617)
.|+ ++..+|.++.|+|||||++++.+.. ...+++.+++++.+|+.+
T Consensus 125 ~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v 191 (267)
T 3kkz_A 125 YNI-----GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPV 191 (267)
T ss_dssp GGT-----CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEE
T ss_pred eec-----CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEE
Confidence 876 5789999999999999999998742 024568888888898875
No 215
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.79 E-value=4.9e-10 Score=117.50 Aligned_cols=113 Identities=17% Similarity=0.226 Sum_probs=80.6
Q ss_pred hHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCC--Ccccccc
Q 007128 193 KYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGI--PAYLGVL 267 (617)
Q Consensus 193 ~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~ 267 (617)
.|.+.+.+.+.. ..+ .+|||||||+|.++..+++. .|+++|+++ ++..++ +.+...++ .+.+..+
T Consensus 25 ~y~~ai~~~~~~------~~~--~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~-~~~~a~-~~~~~~~~~~~i~~~~~ 94 (328)
T 1g6q_1 25 SYRNAIIQNKDL------FKD--KIVLDVGCGTGILSMFAAKHGAKHVIGVDMSS-IIEMAK-ELVELNGFSDKITLLRG 94 (328)
T ss_dssp HHHHHHHHHHHH------HTT--CEEEEETCTTSHHHHHHHHTCCSEEEEEESST-HHHHHH-HHHHHTTCTTTEEEEES
T ss_pred HHHHHHHhhHhh------cCC--CEEEEecCccHHHHHHHHHCCCCEEEEEChHH-HHHHHH-HHHHHcCCCCCEEEEEC
Confidence 455555544443 222 58999999999999888765 589999994 766665 34444454 3678888
Q ss_pred cccccCCCCCccccccccccccc--cccccceEEEEecccccCCceeeec
Q 007128 268 GTKRLPYPSRSFELAHCSRCRID--WLQRDGILLLELDRLLRPGGYFAYS 315 (617)
Q Consensus 268 d~~~lpf~~~sFDlV~~s~~l~h--~~~~~~~~L~el~RvLrPGG~lvis 315 (617)
|+..+++++++||+|+|...... .......++.++.++|+|||+++..
T Consensus 95 d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 95 KLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp CTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred chhhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 99989888889999998643222 2222345788889999999999864
No 216
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.79 E-value=2.9e-10 Score=116.91 Aligned_cols=97 Identities=10% Similarity=0.137 Sum_probs=68.3
Q ss_pred hHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc-c-----cchhhhhhhccc--CCcchhhhhh-hhhh
Q 007128 461 NLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL-I-----GSIHNWCEAYST--YPRTYDLLHA-WTVF 530 (617)
Q Consensus 461 ~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl-~-----~~~~~~~e~~~~--~p~tfDlvh~-~~~~ 530 (617)
+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.++.- . ..+...+.++.. ++++||+|.| ..++
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~ 161 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGW---EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALDKRFGTVVISSGSI 161 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTC---CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCSCCEEEEEECHHHH
T ss_pred cEEEEeccCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcCCCcCEEEECCccc
Confidence 799999999999999999876 5666774 678777766521 0 112222222222 2599999885 4666
Q ss_pred hhhhhcCCCcccchhhccccccCcceEEEecC
Q 007128 531 SDIEKRGCSGEDLLLEMDRILRPTGFVIIRDK 562 (617)
Q Consensus 531 ~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~ 562 (617)
.++.. .+...+|.++.|+|||||.|+|...
T Consensus 162 ~~~~~--~~~~~~l~~~~~~L~pgG~l~~~~~ 191 (299)
T 3g2m_A 162 NELDE--ADRRGLYASVREHLEPGGKFLLSLA 191 (299)
T ss_dssp TTSCH--HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccCCH--HHHHHHHHHHHHHcCCCcEEEEEee
Confidence 65431 1357899999999999999999653
No 217
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.79 E-value=1.8e-10 Score=115.16 Aligned_cols=97 Identities=18% Similarity=0.118 Sum_probs=71.4
Q ss_pred chhhHHHhhhcchhhHhhhcCC--ceEEEEeecCCC-CCceEEEeeccc-ccchhhhhhhcccCCcchhhhhhhhhhhhh
Q 007128 458 SLRNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDG-PNTLKLIYDRGL-IGSIHNWCEAYSTYPRTYDLLHAWTVFSDI 533 (617)
Q Consensus 458 ~~r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~-~~~l~~~~~rgl-~~~~~~~~e~~~~~p~tfDlvh~~~~~~~~ 533 (617)
.-.+|||+|||+|.++..|++. +. +|+.+|. +.|++.+.++.- +-.++.-.+.++ .+++||+|++..++.|+
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~ 108 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVN---VITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANAVFQWV 108 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTT---SEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEESCGGGS
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeCchhhC
Confidence 3457999999999999999876 55 4555563 577777665521 111111112233 24899999999999988
Q ss_pred hhcCCCcccchhhccccccCcceEEEecC
Q 007128 534 EKRGCSGEDLLLEMDRILRPTGFVIIRDK 562 (617)
Q Consensus 534 ~~~~c~~~~~l~Em~RiLrPgG~~ii~~~ 562 (617)
. ++..+|.|+.|+|||||++++..+
T Consensus 109 ~----~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 109 P----DHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp T----THHHHHHHHGGGEEEEEEEEEEEE
T ss_pred C----CHHHHHHHHHHhcCCCeEEEEEeC
Confidence 6 788999999999999999999864
No 218
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.79 E-value=4.1e-10 Score=119.96 Aligned_cols=122 Identities=17% Similarity=0.114 Sum_probs=85.2
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRID 290 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h 290 (617)
..+|||||||+|.++..++++ .++++|+ +.++..++ +. .++.+..+|+.. |++++ |+|++..++++
T Consensus 204 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-----~~-~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~ 273 (368)
T 3reo_A 204 LTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAP-----AF-SGVEHLGGDMFD-GVPKG--DAIFIKWICHD 273 (368)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-----CC-TTEEEEECCTTT-CCCCC--SEEEEESCGGG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhh-----hc-CCCEEEecCCCC-CCCCC--CEEEEechhhc
Confidence 468999999999999999864 4677787 54554443 11 357788888776 77754 99999999777
Q ss_pred ccccc-ceEEEEecccccCCceeeecChhhhcC---CHH--H-------HH---------HHHHHHHHHHHhhhhhhh
Q 007128 291 WLQRD-GILLLELDRLLRPGGYFAYSSPEAYAQ---DEE--D-------LR---------IWKEMSALVERMCWRIAA 346 (617)
Q Consensus 291 ~~~~~-~~~L~el~RvLrPGG~lvis~p~~~~~---~~~--~-------~~---------~w~~l~~l~~~~gf~~v~ 346 (617)
|.++. ..+|++++++|||||++++.+...... ... . .. .-+++.++++++||+.+.
T Consensus 274 ~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~ 351 (368)
T 3reo_A 274 WSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFK 351 (368)
T ss_dssp BCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCeeeE
Confidence 76542 368999999999999999864322110 000 0 00 015688889999997654
No 219
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.78 E-value=2.6e-10 Score=108.16 Aligned_cols=139 Identities=14% Similarity=0.123 Sum_probs=92.5
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc-ccchhhhhhhcccCC-cchhhhhhh-hhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL-IGSIHNWCEAYSTYP-RTYDLLHAW-TVFSDIEK 535 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl-~~~~~~~~e~~~~~p-~tfDlvh~~-~~~~~~~~ 535 (617)
.+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.++.- +..++.-...++ ++ ++||+|++. .++.|+..
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~~~D~i~~~~~~~~~~~~ 123 (195)
T 3cgg_A 48 AKILDAGCGQGRIGGYLSKQGH---DVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQ-ISETDFDLIVSAGNVMGFLAE 123 (195)
T ss_dssp CEEEEETCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSEEEECCTTTSC-CCCCCEEEEEECCCCGGGSCH
T ss_pred CeEEEECCCCCHHHHHHHHCCC---cEEEEcCCHHHHHHHHHhCCCCcEEEcccccCC-CCCCceeEEEECCcHHhhcCh
Confidence 4699999999999999998876 5556663 456555544421 111111111122 33 899999998 67776531
Q ss_pred cCCCcccchhhccccccCcceEEEecChh---HHHHHHHhhhhcccccccccccC-CCCCC-CCCCeEEEEEEec
Q 007128 536 RGCSGEDLLLEMDRILRPTGFVIIRDKQS---VVDFVKKYLRALNWEAVATTADA-SSDSD-KDGDEVVFIVQKK 605 (617)
Q Consensus 536 ~~c~~~~~l~Em~RiLrPgG~~ii~~~~~---~~~~~~~~~~~~~w~~~~~~~~~-~~~~~-~~~~~~~l~~~K~ 605 (617)
. +...+|.++.|+|||||.+++..... ..+++.++++..+++.+ ..... ...+. +..+..+++++|+
T Consensus 124 ~--~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~-~~~~~~~~~~~~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 124 D--GREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELE-NAFESWDLKPFVQGSEFLVAVFTKK 195 (195)
T ss_dssp H--HHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEE-EEESSTTCCBCCTTCSEEEEEEEEC
T ss_pred H--HHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEe-eeecccccCcCCCCCcEEEEEEecC
Confidence 1 45789999999999999999976554 46789999999999885 33221 11221 2345667777774
No 220
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.78 E-value=1e-10 Score=118.29 Aligned_cols=116 Identities=11% Similarity=0.069 Sum_probs=80.7
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecc-c-------------------ccchhhhhhhcccCC
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRG-L-------------------IGSIHNWCEAYSTYP 518 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rg-l-------------------~~~~~~~~e~~~~~p 518 (617)
.+|||+|||+|.++..|+++|. .|+.+|. +.|++.|.++. + ...+.-.+.++..+|
T Consensus 70 ~~vLD~GCG~G~~~~~La~~G~---~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~ 146 (252)
T 2gb4_A 70 LRVFFPLCGKAIEMKWFADRGH---TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP 146 (252)
T ss_dssp CEEEETTCTTCTHHHHHHHTTC---EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG
T ss_pred CeEEEeCCCCcHHHHHHHHCCC---eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCC
Confidence 3699999999999999999987 6777774 67877775442 1 012222233333222
Q ss_pred ----cchhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEec-C-----------hhHHHHHHHhhhhcccccc
Q 007128 519 ----RTYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRD-K-----------QSVVDFVKKYLRALNWEAV 581 (617)
Q Consensus 519 ----~tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~-~-----------~~~~~~~~~~~~~~~w~~~ 581 (617)
++||+|.+..+|.++.. .+...++.||.|+|||||.+++.. . .-..+++..++.. .|+++
T Consensus 147 ~~~~~~FD~V~~~~~l~~l~~--~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~ 222 (252)
T 2gb4_A 147 RANIGKFDRIWDRGALVAINP--GDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQ 222 (252)
T ss_dssp GGCCCCEEEEEESSSTTTSCG--GGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEE
T ss_pred cccCCCEEEEEEhhhhhhCCH--HHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEE
Confidence 78999999888887742 245679999999999999996321 1 0135678888876 47763
No 221
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.78 E-value=1e-09 Score=110.00 Aligned_cols=100 Identities=11% Similarity=0.161 Sum_probs=68.4
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCCC--ccccccccccc---CCC---CCccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGIP--AYLGVLGTKRL---PYP---SRSFELA 282 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~~--~~~~~~d~~~l---pf~---~~sFDlV 282 (617)
..+|||+|||+|.++..++.+ .|+++|+++.++..++. .+...++. +.+..+|+... +++ +++||+|
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKK-NVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHH-HHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 468999999999988888754 59999999998888874 34444543 67777776552 444 2689999
Q ss_pred cccccccccc--------------cccceEEEEecccccCCceeeec
Q 007128 283 HCSRCRIDWL--------------QRDGILLLELDRLLRPGGYFAYS 315 (617)
Q Consensus 283 ~~s~~l~h~~--------------~~~~~~L~el~RvLrPGG~lvis 315 (617)
+|+...++.. .+...++.++.|+|||||.+.+.
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 9874433221 01124678999999999998875
No 222
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.78 E-value=1.2e-09 Score=108.89 Aligned_cols=140 Identities=16% Similarity=0.163 Sum_probs=90.1
Q ss_pred hhhHHHhhhcchhhHhhhc--CCceEEEEeecCCC-CCceEEEeec----cc--ccchhhhhhhccc---CCcchhhhhh
Q 007128 459 LRNLMDMKAHLGSFAAALK--EKDVWVMSVVPEDG-PNTLKLIYDR----GL--IGSIHNWCEAYST---YPRTYDLLHA 526 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~--~~~~~v~~v~~~~~-~~~l~~~~~r----gl--~~~~~~~~e~~~~---~p~tfDlvh~ 526 (617)
-.+|||+|||+|.++..|+ ..+. .|+.+|. +.+++.+.++ |+ +-.++.-.+.++. .+.+||+|.|
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHL---HVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTA 147 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEE
Confidence 3469999999999999998 4455 4666664 5666666543 33 2233322233332 2479999998
Q ss_pred hhhhhhhhhcCCCcccchhhccccccCcceEEEecChh---HHHHHHHhhhhcccccccccccCCCCCCCCCCeEEEEEE
Q 007128 527 WTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS---VVDFVKKYLRALNWEAVATTADASSDSDKDGDEVVFIVQ 603 (617)
Q Consensus 527 ~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~---~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~~~ 603 (617)
..+ .++..++.++.|+|||||.+++.+... .++++.+.++..+++.+ .+..- .-+...+...+++++
T Consensus 148 ~~~--------~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~-~~~~~-~~~~~~~~~~l~~~~ 217 (240)
T 1xdz_A 148 RAV--------ARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELE-NIHSF-KLPIEESDRNIMVIR 217 (240)
T ss_dssp ECC--------SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEE-EEEEE-ECTTTCCEEEEEEEE
T ss_pred ecc--------CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEe-EEEEE-ecCCCCCceEEEEEE
Confidence 552 267889999999999999999876433 45567777778888764 22210 112223456777888
Q ss_pred ecccccCC
Q 007128 604 KKIWLTSE 611 (617)
Q Consensus 604 K~~w~~~~ 611 (617)
|.-.++..
T Consensus 218 k~~~~~~~ 225 (240)
T 1xdz_A 218 KIKNTPKK 225 (240)
T ss_dssp ECSCCCTT
T ss_pred ecCCCCCC
Confidence 86555443
No 223
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.78 E-value=1.2e-09 Score=112.92 Aligned_cols=102 Identities=14% Similarity=0.110 Sum_probs=71.7
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHH-----hCCCccccccccccc-CCCCCccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALE-----RGIPAYLGVLGTKRL-PYPSRSFELAHC 284 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~-----rg~~~~~~~~d~~~l-pf~~~sFDlV~~ 284 (617)
..+|||||||+|.++..+++. .|+++|+++.+++.++..+... ...++.+..+|.... +..+++||+|++
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~ 163 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIIS 163 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEE
T ss_pred CCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEE
Confidence 468999999999999988875 4899999999888877544332 123567777786553 445689999997
Q ss_pred ccccccccccc----ceEEEEecccccCCceeeecCh
Q 007128 285 SRCRIDWLQRD----GILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 285 s~~l~h~~~~~----~~~L~el~RvLrPGG~lvis~p 317 (617)
... .++.... ..+++++.++|+|||++++...
T Consensus 164 D~~-~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 164 DCT-DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp CC-----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCC-CccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 533 2322211 3477899999999999999653
No 224
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.77 E-value=3.2e-10 Score=107.79 Aligned_cols=119 Identities=17% Similarity=0.090 Sum_probs=75.2
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc--ccchhhhhhhcccCC-cchhhhhhh-hhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL--IGSIHNWCEAYSTYP-RTYDLLHAW-TVF 530 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl--~~~~~~~~e~~~~~p-~tfDlvh~~-~~~ 530 (617)
.+|||+|||+|.++..|++++. .|+.+|. +.+++.|.++ |+ +-.+++-.+.+..++ ++||+|.++ ..+
T Consensus 24 ~~vLDiGcG~G~~~~~la~~~~---~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~ 100 (185)
T 3mti_A 24 SIVVDATMGNGNDTAFLAGLSK---KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYL 100 (185)
T ss_dssp CEEEESCCTTSHHHHHHHTTSS---EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC--
T ss_pred CEEEEEcCCCCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCC
Confidence 3699999999999999999866 5667774 6777777655 33 222333334444343 899999876 333
Q ss_pred hhhh----hcCCCcccchhhccccccCcceEEEecCh------hHHHHHHHhhhhcc---cccc
Q 007128 531 SDIE----KRGCSGEDLLLEMDRILRPTGFVIIRDKQ------SVVDFVKKYLRALN---WEAV 581 (617)
Q Consensus 531 ~~~~----~~~c~~~~~l~Em~RiLrPgG~~ii~~~~------~~~~~~~~~~~~~~---w~~~ 581 (617)
++.. ...-+...+|.|+.|+|||||.+++.... ...+.+.+++..+. |..+
T Consensus 101 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 164 (185)
T 3mti_A 101 PSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAM 164 (185)
T ss_dssp ---------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEE
T ss_pred CCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEE
Confidence 2100 00012346789999999999999987543 23345666666554 6653
No 225
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.77 E-value=1.5e-10 Score=115.80 Aligned_cols=115 Identities=14% Similarity=0.189 Sum_probs=82.6
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc---ccchhhhhhhcccCCcchhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL---IGSIHNWCEAYSTYPRTYDLLHAWTVFS 531 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl---~~~~~~~~e~~~~~p~tfDlvh~~~~~~ 531 (617)
.+|||+|||+|.++..|++.... .|+.+|. +.+++.+.++ |+ +-.++.-.+.++.-+++||+|+|..++.
T Consensus 48 ~~vLDiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 125 (257)
T 3f4k_A 48 AKIADIGCGTGGQTLFLADYVKG--QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAIY 125 (257)
T ss_dssp CEEEEETCTTSHHHHHHHHHCCS--EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCSC
T ss_pred CeEEEeCCCCCHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChHh
Confidence 47999999999999999987431 5666664 5677666555 32 1111111133332138999999999998
Q ss_pred hhhhcCCCcccchhhccccccCcceEEEecCh---------------------hHHHHHHHhhhhcccccc
Q 007128 532 DIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ---------------------SVVDFVKKYLRALNWEAV 581 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~---------------------~~~~~~~~~~~~~~w~~~ 581 (617)
|+ ++..+|.++.|+|||||++++.+.. ...+++.+++++.+++.+
T Consensus 126 ~~-----~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v 191 (257)
T 3f4k_A 126 NI-----GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPT 191 (257)
T ss_dssp CC-----CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEE
T ss_pred hc-----CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEE
Confidence 66 5789999999999999999998742 024567888888888875
No 226
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.77 E-value=1.3e-10 Score=115.63 Aligned_cols=97 Identities=15% Similarity=0.275 Sum_probs=71.8
Q ss_pred chhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc--ccchhhhhhhcccCC-cchhhhhhhhh
Q 007128 458 SLRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL--IGSIHNWCEAYSTYP-RTYDLLHAWTV 529 (617)
Q Consensus 458 ~~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl--~~~~~~~~e~~~~~p-~tfDlvh~~~~ 529 (617)
.-.+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.++ |+ +-.+..-.+.++ ++ ++||+|++..+
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~~ 96 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPYVQ---ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-FPDDSFDIITCRYA 96 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-SCTTCEEEEEEESC
T ss_pred CCCEEEEEccCcCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC-CCCCcEEEEEECCc
Confidence 344799999999999999998865 5666664 5676665544 22 111121123333 33 89999999999
Q ss_pred hhhhhhcCCCcccchhhccccccCcceEEEecC
Q 007128 530 FSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDK 562 (617)
Q Consensus 530 ~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~ 562 (617)
+.|+. ++..+|.|+.|+|||||++++.+.
T Consensus 97 l~~~~----~~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 97 AHHFS----DVRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp GGGCS----CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhcc----CHHHHHHHHHHHcCCCcEEEEEEc
Confidence 99876 789999999999999999999754
No 227
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.77 E-value=1.1e-09 Score=108.62 Aligned_cols=109 Identities=17% Similarity=0.239 Sum_probs=77.0
Q ss_pred hHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCC-Cccccccc
Q 007128 193 KYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLG 268 (617)
Q Consensus 193 ~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d 268 (617)
.....+.+.+.. ..+ .+|||||||+|.++..+++. .|+++|+++.++..++.... ..++ ++.+..+|
T Consensus 78 ~~~~~~~~~l~~------~~~--~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~v~~~~~d 148 (235)
T 1jg1_A 78 HMVAIMLEIANL------KPG--MNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLE-RAGVKNVHVILGD 148 (235)
T ss_dssp HHHHHHHHHHTC------CTT--CCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHH-HTTCCSEEEEESC
T ss_pred HHHHHHHHhcCC------CCC--CEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHH-HcCCCCcEEEECC
Confidence 344556666654 333 58999999999999988774 58999999887777664333 3333 46677777
Q ss_pred ccccCCCCC-ccccccccccccccccccceEEEEecccccCCceeeecChh
Q 007128 269 TKRLPYPSR-SFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 269 ~~~lpf~~~-sFDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
. ..+++++ .||+|++..++.++ ..++.++|+|||+++++.+.
T Consensus 149 ~-~~~~~~~~~fD~Ii~~~~~~~~-------~~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 149 G-SKGFPPKAPYDVIIVTAGAPKI-------PEPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp G-GGCCGGGCCEEEEEECSBBSSC-------CHHHHHTEEEEEEEEEEECS
T ss_pred c-ccCCCCCCCccEEEECCcHHHH-------HHHHHHhcCCCcEEEEEEec
Confidence 6 4556554 49999988764333 23789999999999997643
No 228
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.77 E-value=2.9e-10 Score=110.13 Aligned_cols=112 Identities=18% Similarity=0.171 Sum_probs=82.6
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----ccccchhhhhhhcccC-Ccchhhhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWCEAYSTY-PRTYDLLHAWTVFSDI 533 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~e~~~~~-p~tfDlvh~~~~~~~~ 533 (617)
.+|||+|||+|.++..|++.+. .+|+.+|. +.+++.+.++ |+-. +...+.++..+ +++||+|.++.++.++
T Consensus 62 ~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~fD~i~~~~~~~~~ 138 (205)
T 3grz_A 62 LTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLADVDGKFDLIVANILAEIL 138 (205)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTTCCSCEEEEEEESCHHHH
T ss_pred CEEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccccCCCCceEEEECCcHHHH
Confidence 4699999999999999998754 25666664 5777766665 3211 22222232223 4999999998888753
Q ss_pred hhcCCCcccchhhccccccCcceEEEecC-hhHHHHHHHhhhhcccccc
Q 007128 534 EKRGCSGEDLLLEMDRILRPTGFVIIRDK-QSVVDFVKKYLRALNWEAV 581 (617)
Q Consensus 534 ~~~~c~~~~~l~Em~RiLrPgG~~ii~~~-~~~~~~~~~~~~~~~w~~~ 581 (617)
..++.++.|+|||||++++.+. ....+++.+++...+|+.+
T Consensus 139 -------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~ 180 (205)
T 3grz_A 139 -------LDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQID 180 (205)
T ss_dssp -------HHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEE
T ss_pred -------HHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceE
Confidence 5789999999999999999753 4467788999999999885
No 229
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.77 E-value=6e-10 Score=118.54 Aligned_cols=122 Identities=17% Similarity=0.122 Sum_probs=85.6
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRID 290 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h 290 (617)
..+|||||||+|.++..++++ .++++|+ +.++..++ + ..++.+..+|+.. |++++ |+|++..++++
T Consensus 202 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-----~-~~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~ 271 (364)
T 3p9c_A 202 LGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAP-----Q-FPGVTHVGGDMFK-EVPSG--DTILMKWILHD 271 (364)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-----C-CTTEEEEECCTTT-CCCCC--SEEEEESCGGG
T ss_pred CCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhh-----h-cCCeEEEeCCcCC-CCCCC--CEEEehHHhcc
Confidence 468999999999999998864 4677787 54544433 1 1357788888877 77754 99999999777
Q ss_pred cccc-cceEEEEecccccCCceeeecChhhhcC---CHH--------HHHH----------HHHHHHHHHHhhhhhhh
Q 007128 291 WLQR-DGILLLELDRLLRPGGYFAYSSPEAYAQ---DEE--------DLRI----------WKEMSALVERMCWRIAA 346 (617)
Q Consensus 291 ~~~~-~~~~L~el~RvLrPGG~lvis~p~~~~~---~~~--------~~~~----------w~~l~~l~~~~gf~~v~ 346 (617)
|.++ ...+|++++++|||||++++........ ... .... -+++.++++++||+.+.
T Consensus 272 ~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~ 349 (364)
T 3p9c_A 272 WSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVK 349 (364)
T ss_dssp SCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceEE
Confidence 7544 2468999999999999999864322110 000 0000 15688888999997654
No 230
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.77 E-value=1.1e-09 Score=108.06 Aligned_cols=95 Identities=17% Similarity=0.231 Sum_probs=71.0
Q ss_pred eeEEEeecccccccccccccc----------hhhhhccCCCccchhhhHHHHHh-----CCCcccccccccccCCCC-Cc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----------DVITMSLAPNDVHQNQIQFALER-----GIPAYLGVLGTKRLPYPS-RS 278 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----------~V~gvDis~~dl~~a~~~~a~~r-----g~~~~~~~~d~~~lpf~~-~s 278 (617)
+.+|||||||+|.++..|++. .|+++|+++.++..++....... ..++.+..+|... ++++ ++
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~ 163 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPNAP 163 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGGCS
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcCCC
Confidence 368999999999998888762 58999999988877764443322 2356677777765 5554 78
Q ss_pred cccccccccccccccccceEEEEecccccCCceeeecCh
Q 007128 279 FELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 279 FDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p 317 (617)
||+|++...+.+ ++.++.++|||||++++...
T Consensus 164 fD~I~~~~~~~~-------~~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 164 YNAIHVGAAAPD-------TPTELINQLASGGRLIVPVG 195 (227)
T ss_dssp EEEEEECSCBSS-------CCHHHHHTEEEEEEEEEEES
T ss_pred ccEEEECCchHH-------HHHHHHHHhcCCCEEEEEEe
Confidence 999998766433 34678999999999999743
No 231
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.76 E-value=5e-10 Score=108.28 Aligned_cols=93 Identities=14% Similarity=0.031 Sum_probs=72.2
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC-CcccccccccccCCCCCccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRLPYPSRSFELAHCSRCRID 290 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h 290 (617)
.+|||+|||+|.++..++.. .++++|+++.++..++. .+...++ ++.+...|+..++ ++++||+|++...
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~~--- 141 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQ-VQHELKLENIEPVQSRVEEFP-SEPPFDGVISRAF--- 141 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHH-HHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSCS---
T ss_pred CeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCCeEEEecchhhCC-ccCCcCEEEEecc---
Confidence 58999999999999888754 58999999988877763 3334444 3777888887766 4578999997532
Q ss_pred cccccceEEEEecccccCCceeeec
Q 007128 291 WLQRDGILLLELDRLLRPGGYFAYS 315 (617)
Q Consensus 291 ~~~~~~~~L~el~RvLrPGG~lvis 315 (617)
.+...++.++.++|+|||++++.
T Consensus 142 --~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 142 --ASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp --SSHHHHHHHHTTSEEEEEEEEEE
T ss_pred --CCHHHHHHHHHHhcCCCcEEEEE
Confidence 22356899999999999999986
No 232
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.76 E-value=2.5e-10 Score=116.79 Aligned_cols=98 Identities=12% Similarity=0.114 Sum_probs=70.6
Q ss_pred chhhHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CCceEEEeec----cc-ccchhhhhhhcccCCcchhhhhhhh
Q 007128 458 SLRNLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PNTLKLIYDR----GL-IGSIHNWCEAYSTYPRTYDLLHAWT 528 (617)
Q Consensus 458 ~~r~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~~l~~~~~r----gl-~~~~~~~~e~~~~~p~tfDlvh~~~ 528 (617)
.-.+|||+|||+|.++..|++. +. .|+.+|. +.+++.+.++ +. +-.+..-.+.++ ++++||+|++..
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~ 97 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGS---KYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE-LNDKYDIAICHA 97 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTC---EEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCC-CSSCEEEEEEES
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcC-cCCCeeEEEECC
Confidence 3457999999999999999986 45 4555553 4565554443 11 111111112222 368999999999
Q ss_pred hhhhhhhcCCCcccchhhccccccCcceEEEecCh
Q 007128 529 VFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 529 ~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
++.|+. ++..+|.++.|+|||||++++.++.
T Consensus 98 ~l~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 98 FLLHMT----TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CGGGCS----SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hhhcCC----CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 999876 7789999999999999999998876
No 233
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.75 E-value=2.9e-10 Score=121.82 Aligned_cols=101 Identities=16% Similarity=0.186 Sum_probs=67.6
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc-ccchhhhhhhcccCCcchhhhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL-IGSIHNWCEAYSTYPRTYDLLHAWTVFSDI 533 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl-~~~~~~~~e~~~~~p~tfDlvh~~~~~~~~ 533 (617)
.+|||+|||+|.++..|++.+. .|+.+|. +.+++.+.++ |+ +-.++.-...+..-+++||+|.++..|++.
T Consensus 235 ~~VLDlGcG~G~~~~~la~~g~---~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~ 311 (381)
T 3dmg_A 235 RQVLDLGAGYGALTLPLARMGA---EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVG 311 (381)
T ss_dssp CEEEEETCTTSTTHHHHHHTTC---EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCTT
T ss_pred CEEEEEeeeCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhhc
Confidence 3699999999999999999876 5666664 5666665543 22 111221111221112799999998888752
Q ss_pred hh-cCCCcccchhhccccccCcceEEEecCh
Q 007128 534 EK-RGCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 534 ~~-~~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
.. ..-+...++.++.|+|||||.++|....
T Consensus 312 ~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 312 GAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp CSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred ccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 10 0114457899999999999999997554
No 234
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.75 E-value=1.1e-09 Score=111.53 Aligned_cols=100 Identities=16% Similarity=0.174 Sum_probs=68.7
Q ss_pred eeEEEeecccccccccccccc-hhhhhccCCCccchhhhHH--HHHhCCCcccc--cccccccCCCCCcccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS-DVITMSLAPNDVHQNQIQF--ALERGIPAYLG--VLGTKRLPYPSRSFELAHCSRCRI 289 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~-~V~gvDis~~dl~~a~~~~--a~~rg~~~~~~--~~d~~~lpf~~~sFDlV~~s~~l~ 289 (617)
+.+|||||||+|.++..+++. .|+|+|+++ ++..+..+. ....+.++.+. ++|+..++ +++||+|+|..+ .
T Consensus 75 g~~VLDlGcGtG~~s~~la~~~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~~-~ 150 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASRPHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCDVG-E 150 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTSTTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEECCC-C
T ss_pred CCEEEEeCcCCCHHHHHHHHcCcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEeCc-c
Confidence 379999999999999988875 699999998 543222110 01112245666 77888776 679999998754 2
Q ss_pred c---c-cccc--ceEEEEecccccCCc--eeeecChh
Q 007128 290 D---W-LQRD--GILLLELDRLLRPGG--YFAYSSPE 318 (617)
Q Consensus 290 h---~-~~~~--~~~L~el~RvLrPGG--~lvis~p~ 318 (617)
+ + .+.. ..+|.++.++||||| .|++..+.
T Consensus 151 ~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 151 SSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred cCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 1 1 1111 127888999999999 99986544
No 235
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.75 E-value=5.8e-10 Score=114.42 Aligned_cols=100 Identities=16% Similarity=0.132 Sum_probs=69.1
Q ss_pred eeEEEeecccccccccccccc-hhhhhccCCCccchhhhHH--HHHhCCCcccc--cccccccCCCCCcccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS-DVITMSLAPNDVHQNQIQF--ALERGIPAYLG--VLGTKRLPYPSRSFELAHCSRCRI 289 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~-~V~gvDis~~dl~~a~~~~--a~~rg~~~~~~--~~d~~~lpf~~~sFDlV~~s~~l~ 289 (617)
+.+|||||||+|.++..++++ .|+|+|+++ ++..+..+. ....+.++.+. ++|+..+| +++||+|+|..+ .
T Consensus 83 g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd~~-~ 158 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQPNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLCDIG-E 158 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTSTTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEECCC-C
T ss_pred CCEEEEeccCCCHHHHHHHHcCCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEECCC-c
Confidence 479999999999999988875 699999998 543322110 00112256666 78888776 679999998755 2
Q ss_pred cc----ccccc--eEEEEecccccCCc--eeeecChh
Q 007128 290 DW----LQRDG--ILLLELDRLLRPGG--YFAYSSPE 318 (617)
Q Consensus 290 h~----~~~~~--~~L~el~RvLrPGG--~lvis~p~ 318 (617)
.. .+... .+|.++.++||||| .|++..+.
T Consensus 159 ~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 159 SNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 11 11111 26888999999999 99986544
No 236
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.75 E-value=5.9e-10 Score=118.63 Aligned_cols=91 Identities=16% Similarity=0.152 Sum_probs=70.2
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRID 290 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h 290 (617)
..+|||||||+|.++..++++ .++++|+ +.++..++. . ..+.+..+|+.. ++++ ||+|++..+++|
T Consensus 210 ~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~-----~-~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~ 279 (372)
T 1fp1_D 210 ISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP-----L-SGIEHVGGDMFA-SVPQ--GDAMILKAVCHN 279 (372)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-----C-TTEEEEECCTTT-CCCC--EEEEEEESSGGG
T ss_pred CCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh-----c-CCCEEEeCCccc-CCCC--CCEEEEeccccc
Confidence 368999999999999998875 3566687 655554431 1 246777888876 6664 999999998766
Q ss_pred cccccc--eEEEEecccccCCceeeecC
Q 007128 291 WLQRDG--ILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 291 ~~~~~~--~~L~el~RvLrPGG~lvis~ 316 (617)
|.+. . .+|+++.++|||||++++.+
T Consensus 280 ~~d~-~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 280 WSDE-KCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp SCHH-HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCHH-HHHHHHHHHHHhcCCCCEEEEEE
Confidence 6543 4 79999999999999999874
No 237
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.75 E-value=1.7e-10 Score=119.00 Aligned_cols=129 Identities=11% Similarity=0.077 Sum_probs=82.8
Q ss_pred hhhHHHhhhcchhhHhhhc-C-CceEEEEeecCCC-CCceEEEeec----ccccchhhhhhhcccCC-cchhhhhhhhhh
Q 007128 459 LRNLMDMKAHLGSFAAALK-E-KDVWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWCEAYSTYP-RTYDLLHAWTVF 530 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~-~-~~~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~e~~~~~p-~tfDlvh~~~~~ 530 (617)
-.+|||+|||+|++++.++ + .+. .|+.+|. +.|++.|.++ |+ ..+...+.+...+| ++||+|.+..+.
T Consensus 123 g~rVLDIGcG~G~~ta~~lA~~~ga---~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~d~~FDvV~~~a~~ 198 (298)
T 3fpf_A 123 GERAVFIGGGPLPLTGILLSHVYGM---RVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVIDGLEFDVLMVAALA 198 (298)
T ss_dssp TCEEEEECCCSSCHHHHHHHHTTCC---EEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGGGCCCSEEEECTTC
T ss_pred cCEEEEECCCccHHHHHHHHHccCC---EEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCCCCCcCEEEECCCc
Confidence 3479999999999886653 3 355 5666664 6888887766 54 33333333333344 899999864432
Q ss_pred hhhhhcCCCcccchhhccccccCcceEEEecChhHHHH----HHHhhhhcccccccccccCCCCCCCCCCeEEEEEEe
Q 007128 531 SDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQSVVDF----VKKYLRALNWEAVATTADASSDSDKDGDEVVFIVQK 604 (617)
Q Consensus 531 ~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~~~~~----~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~~~K 604 (617)
.+.+.++.|+.|+|||||.|++++......- +.+ ...-+|+.+..++. .+ .....|.+++|
T Consensus 199 -------~d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~-~~~~gf~~~~~~~p--~~---~v~N~vv~a~k 263 (298)
T 3fpf_A 199 -------EPKRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSD-DDITGFRRAGVVLP--SG---KVNNTSVLVFK 263 (298)
T ss_dssp -------SCHHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCT-GGGTTEEEEEEECC--CT---TCCCEEEEEEE
T ss_pred -------cCHHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCCh-hhhhhhhheeEECC--CC---CcCcEEEEEEc
Confidence 2678999999999999999999986432111 101 12227777523332 21 33567888888
No 238
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.75 E-value=5.6e-10 Score=109.82 Aligned_cols=100 Identities=16% Similarity=0.195 Sum_probs=72.2
Q ss_pred eEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCC--Ccccccccccc-cCCC-----CCccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKR-LPYP-----SRSFELA 282 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~-lpf~-----~~sFDlV 282 (617)
.+|||||||+|.++..|++. .|+++|+++.++..++. .+...++ ++.+..+|+.. ++.. .++||+|
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V 138 (221)
T 3u81_A 60 SLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQ-MLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMV 138 (221)
T ss_dssp SEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHH-HHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEE
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHH-HHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEE
Confidence 58999999999999888763 58999999988887774 3344444 36777777644 3322 2689999
Q ss_pred cccccccccccccceEEEEecccccCCceeeecChh
Q 007128 283 HCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 283 ~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
++.....++... ..++.++ ++|||||++++....
T Consensus 139 ~~d~~~~~~~~~-~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 139 FLDHWKDRYLPD-TLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp EECSCGGGHHHH-HHHHHHT-TCCCTTCEEEESCCC
T ss_pred EEcCCcccchHH-HHHHHhc-cccCCCeEEEEeCCC
Confidence 987654444322 3466666 999999999997544
No 239
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.75 E-value=4.3e-10 Score=119.48 Aligned_cols=138 Identities=14% Similarity=0.184 Sum_probs=92.6
Q ss_pred cchhhHHHhhhcchhhHhhhcCC--ceEEEEeecCCCCCceEEEeec----ccccchhhhhhhcc----cCCcchhhhhh
Q 007128 457 NSLRNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDGPNTLKLIYDR----GLIGSIHNWCEAYS----TYPRTYDLLHA 526 (617)
Q Consensus 457 ~~~r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~~~~l~~~~~r----gl~~~~~~~~e~~~----~~p~tfDlvh~ 526 (617)
...++|||+|||+|.++..|+++ +. .++.+|.+.+++.|.++ |+-..+.....++. .+|.+||+|++
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~ 254 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEV---EVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWM 254 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTC---EEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCC---EEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEE
Confidence 34568999999999999999873 44 34444445666666554 33122222122222 25689999999
Q ss_pred hhhhhhhhhcCCCcccchhhccccccCcceEEEecChh------------------------------HHHHHHHhhhhc
Q 007128 527 WTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS------------------------------VVDFVKKYLRAL 576 (617)
Q Consensus 527 ~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~------------------------------~~~~~~~~~~~~ 576 (617)
..+++++... +...+|.++.|+|||||.|+|.|..- ..+++++++++.
T Consensus 255 ~~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~A 332 (363)
T 3dp7_A 255 SQFLDCFSEE--EVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENA 332 (363)
T ss_dssp ESCSTTSCHH--HHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTT
T ss_pred echhhhCCHH--HHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHc
Confidence 9999866432 34578999999999999999976421 245688889999
Q ss_pred ccccccccccCCCCCCCCCCeEEEEEEec
Q 007128 577 NWEAVATTADASSDSDKDGDEVVFIVQKK 605 (617)
Q Consensus 577 ~w~~~~~~~~~~~~~~~~~~~~~l~~~K~ 605 (617)
+++.+ ++.+ . ......++.+.|.
T Consensus 333 Gf~~v-~~~~--~---~g~~~svi~~~~~ 355 (363)
T 3dp7_A 333 GLEVE-EIQD--N---IGLGHSILQCRLK 355 (363)
T ss_dssp TEEES-CCCC--C---BTTTBEEEEEEEC
T ss_pred CCeEE-EEEe--C---CCCCceEEEEeec
Confidence 99886 4443 1 1234667777664
No 240
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.75 E-value=9.9e-10 Score=114.85 Aligned_cols=138 Identities=13% Similarity=0.093 Sum_probs=93.4
Q ss_pred cCccchhhHHHhhhcchhhHhhhcCC--ceEEEEeecCCCCCceEEEeec----ccccchhhhhhhc-ccCCcchhhhhh
Q 007128 454 IQSNSLRNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDGPNTLKLIYDR----GLIGSIHNWCEAY-STYPRTYDLLHA 526 (617)
Q Consensus 454 i~~~~~r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~~~~l~~~~~r----gl~~~~~~~~e~~-~~~p~tfDlvh~ 526 (617)
+......+|||+|||+|.++..|++. +.. ++.+|.+.+++.+.++ |+-..+.....++ ..+|.+||+|++
T Consensus 165 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~---~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~~~D~v~~ 241 (332)
T 3i53_A 165 YDWAALGHVVDVGGGSGGLLSALLTAHEDLS---GTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGAGGYVL 241 (332)
T ss_dssp SCCGGGSEEEEETCTTSHHHHHHHHHCTTCE---EEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCSCSEEEE
T ss_pred CCCCCCCEEEEeCCChhHHHHHHHHHCCCCe---EEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCCCCcEEEE
Confidence 45566788999999999999999863 332 3333445566555543 3311121111221 234568999999
Q ss_pred hhhhhhhhhcCCCcccchhhccccccCcceEEEecChh----------------------HHHHHHHhhhhccccccccc
Q 007128 527 WTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS----------------------VVDFVKKYLRALNWEAVATT 584 (617)
Q Consensus 527 ~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~----------------------~~~~~~~~~~~~~w~~~~~~ 584 (617)
..+++|.... +...+|.++.|+|||||+++|.|... ..+++++++++.+++.+ ++
T Consensus 242 ~~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~-~~ 318 (332)
T 3i53_A 242 SAVLHDWDDL--SAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVR-AA 318 (332)
T ss_dssp ESCGGGSCHH--HHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEE-EE
T ss_pred ehhhccCCHH--HHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEE-EE
Confidence 9999977532 24789999999999999999987521 24578899999999986 45
Q ss_pred ccCCCCCCCCCCeEEEEEEe
Q 007128 585 ADASSDSDKDGDEVVFIVQK 604 (617)
Q Consensus 585 ~~~~~~~~~~~~~~~l~~~K 604 (617)
.. .. . ..++.++|
T Consensus 319 ~~--~~----~-~~vie~r~ 331 (332)
T 3i53_A 319 HP--IS----Y-VSIVEMTA 331 (332)
T ss_dssp EE--CS----S-SEEEEEEE
T ss_pred EE--CC----C-cEEEEEee
Confidence 43 21 2 66777776
No 241
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.74 E-value=8e-10 Score=115.34 Aligned_cols=124 Identities=15% Similarity=0.144 Sum_probs=85.3
Q ss_pred eEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCC-CcccccccccccCCCCCccccccccc---
Q 007128 216 RTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRLPYPSRSFELAHCSR--- 286 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~lpf~~~sFDlV~~s~--- 286 (617)
.+|||+|||+|..+..|++. .|+++|+++.++..++. .+...++ ++.+..+|+..++..+++||+|++..
T Consensus 120 ~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~-~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~Pcs 198 (315)
T 1ixk_A 120 EIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRL-NLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAPCT 198 (315)
T ss_dssp CEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHH-HHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECCTT
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHH-HHHHhCCCeEEEEECChhhcccccccCCEEEEeCCCC
Confidence 68999999999999888753 48999999988877764 3444455 57788888888775567899999731
Q ss_pred --cccccccc----------------cceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhhh
Q 007128 287 --CRIDWLQR----------------DGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRIA 345 (617)
Q Consensus 287 --~l~h~~~~----------------~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~v 345 (617)
..++..++ ...+|.++.++|||||++++++-...+...+ ..+..++++.+|+.+
T Consensus 199 g~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene-----~~v~~~l~~~~~~~~ 270 (315)
T 1ixk_A 199 GSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENE-----FVIQWALDNFDVELL 270 (315)
T ss_dssp STTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTH-----HHHHHHHHHSSEEEE
T ss_pred CcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhH-----HHHHHHHhcCCCEEe
Confidence 11211111 0357889999999999999975443322221 345666676676544
No 242
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.74 E-value=3.5e-10 Score=113.98 Aligned_cols=99 Identities=18% Similarity=0.328 Sum_probs=71.5
Q ss_pred hhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecccccchhhhhhhcccCC-cchhhhhhhhhhhhhhhc
Q 007128 459 LRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGLIGSIHNWCEAYSTYP-RTYDLLHAWTVFSDIEKR 536 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl~~~~~~~~e~~~~~p-~tfDlvh~~~~~~~~~~~ 536 (617)
-.+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.++...-.+..-.+.++ ++ ++||+|.+..++.|+..
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~~~~~~~- 129 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQERGF---EVVLVDPSKEMLEVAREKGVKNVVEAKAEDLP-FPSGAFEAVLALGDVLSYVE- 129 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHHTCSCEEECCTTSCC-SCTTCEEEEEECSSHHHHCS-
T ss_pred CCeEEEeCCCcCHHHHHHHHcCC---eEEEEeCCHHHHHHHHhhcCCCEEECcHHHCC-CCCCCEEEEEEcchhhhccc-
Confidence 34799999999999999999876 5666664 577777766643101111112233 33 89999999876665521
Q ss_pred CCCcccchhhccccccCcceEEEecChh
Q 007128 537 GCSGEDLLLEMDRILRPTGFVIIRDKQS 564 (617)
Q Consensus 537 ~c~~~~~l~Em~RiLrPgG~~ii~~~~~ 564 (617)
++..+|.|+.|+|||||.+++.....
T Consensus 130 --~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 130 --NKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred --cHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 58899999999999999999987653
No 243
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.74 E-value=8.5e-10 Score=108.49 Aligned_cols=96 Identities=16% Similarity=0.088 Sum_probs=72.2
Q ss_pred eEEEeecccccccccccccc---------hhhhhccCCCccchhhhHHHHHh-----CCCcccccccccccC----CCCC
Q 007128 216 RTVLDVGCGVASFGAYLLSS---------DVITMSLAPNDVHQNQIQFALER-----GIPAYLGVLGTKRLP----YPSR 277 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~---------~V~gvDis~~dl~~a~~~~a~~r-----g~~~~~~~~d~~~lp----f~~~ 277 (617)
.+|||||||+|.++..|++. .|+++|+++.++..++....... ..++.+..+|....+ +..+
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 161 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELG 161 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHC
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCC
Confidence 68999999999988888753 58999999988877764433322 235677778877654 5567
Q ss_pred ccccccccccccccccccceEEEEecccccCCceeeecChh
Q 007128 278 SFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 278 sFDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
+||+|++...+.+ ++.++.++|+|||++++..+.
T Consensus 162 ~fD~I~~~~~~~~-------~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 162 LFDAIHVGASASE-------LPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CEEEEEECSBBSS-------CCHHHHHHEEEEEEEEEEEEE
T ss_pred CcCEEEECCchHH-------HHHHHHHhcCCCcEEEEEEcc
Confidence 8999998765332 457889999999999997543
No 244
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.74 E-value=1.2e-09 Score=118.71 Aligned_cols=115 Identities=7% Similarity=-0.011 Sum_probs=78.2
Q ss_pred hhHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc----hhhhhccCCCccchh--hh----HHHHHhC--
Q 007128 192 DKYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQN--QI----QFALERG-- 259 (617)
Q Consensus 192 ~~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a--~~----~~a~~rg-- 259 (617)
......+.+.+.. .. +.+|||||||+|.++..++.. .|+|+|+++.++..| +. +.+...+
T Consensus 228 p~~v~~ml~~l~l------~~--g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~ 299 (433)
T 1u2z_A 228 PNFLSDVYQQCQL------KK--GDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMR 299 (433)
T ss_dssp HHHHHHHHHHTTC------CT--TCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHhcCC------CC--CCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC
Confidence 3444555555544 33 368999999999999988874 489999999877766 22 2223334
Q ss_pred -CCccccccccccc--CC--CCCccccccccccccccccccceEEEEecccccCCceeeecC
Q 007128 260 -IPAYLGVLGTKRL--PY--PSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 260 -~~~~~~~~d~~~l--pf--~~~sFDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~ 316 (617)
.++.+..+|.... ++ ..++||+|+++..+ +..+...+|.++.++|||||.+++..
T Consensus 300 ~~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l--~~~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 300 LNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFL--FDEDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp CCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTT--CCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred CCceEEEEcCccccccccccccCCCCEEEEeCcc--ccccHHHHHHHHHHhCCCCeEEEEee
Confidence 2456665543321 22 24789999987654 22444567899999999999999974
No 245
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.73 E-value=1.8e-10 Score=112.59 Aligned_cols=118 Identities=12% Similarity=0.133 Sum_probs=80.7
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecc----cc----cchhhhhhhccc--CC-cchhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRG----LI----GSIHNWCEAYST--YP-RTYDLLHAW 527 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rg----l~----~~~~~~~e~~~~--~p-~tfDlvh~~ 527 (617)
.+|||+|||+|.++..|++++-. .+|+.+|. +.+++.+.++- +- ..+...+.++.. .+ ++||+|.|.
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 109 (217)
T 3jwh_A 31 RRVIDLGCGQGNLLKILLKDSFF-EQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATVI 109 (217)
T ss_dssp CEEEEETCTTCHHHHHHHHCTTC-SEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEEE
T ss_pred CEEEEeCCCCCHHHHHHHhhCCC-CEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEeeH
Confidence 47999999999999999986410 14666663 57777666551 10 012222222222 22 799999999
Q ss_pred hhhhhhhhcCCCcccchhhccccccCcceEEEecChhH----------------------HHHHH----Hhhhhccccc
Q 007128 528 TVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQSV----------------------VDFVK----KYLRALNWEA 580 (617)
Q Consensus 528 ~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~~----------------------~~~~~----~~~~~~~w~~ 580 (617)
.++.|+... ++..+|.++.|+|||||.+++...... .++++ .++++.++++
T Consensus 110 ~~l~~~~~~--~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v 186 (217)
T 3jwh_A 110 EVIEHLDLS--RLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNV 186 (217)
T ss_dssp SCGGGCCHH--HHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHHHSSEEE
T ss_pred HHHHcCCHH--HHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHHHcCceE
Confidence 999988522 447899999999999998888766532 22344 8888888887
No 246
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.73 E-value=1.5e-09 Score=110.44 Aligned_cols=114 Identities=13% Similarity=0.124 Sum_probs=82.8
Q ss_pred eEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCC--CcccccccccccCCCCCccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRLPYPSRSFELAHCSRCR 288 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~lpf~~~sFDlV~~s~~l 288 (617)
.+|||+|||+|.++..+++. .|+++|+++.++..++. .+...++ ++.+...|+... +++++||+|++..
T Consensus 114 ~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~~-- 189 (277)
T 1o54_A 114 DRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAES-NLTKWGLIERVTIKVRDISEG-FDEKDVDALFLDV-- 189 (277)
T ss_dssp CEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHH-HHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEECC--
T ss_pred CEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHH-HHHHcCCCCCEEEEECCHHHc-ccCCccCEEEECC--
Confidence 68999999999998888764 48999999887777663 3333344 466777777665 6677899998632
Q ss_pred cccccccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhhh
Q 007128 289 IDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRIA 345 (617)
Q Consensus 289 ~h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~v 345 (617)
.++..++.++.++|+|||++++..+... ...++.+.+++.||..+
T Consensus 190 ----~~~~~~l~~~~~~L~pgG~l~~~~~~~~--------~~~~~~~~l~~~gf~~~ 234 (277)
T 1o54_A 190 ----PDPWNYIDKCWEALKGGGRFATVCPTTN--------QVQETLKKLQELPFIRI 234 (277)
T ss_dssp ----SCGGGTHHHHHHHEEEEEEEEEEESSHH--------HHHHHHHHHHHSSEEEE
T ss_pred ----cCHHHHHHHHHHHcCCCCEEEEEeCCHH--------HHHHHHHHHHHCCCcee
Confidence 2335789999999999999999765431 12455566667788544
No 247
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.72 E-value=2.4e-10 Score=110.85 Aligned_cols=95 Identities=24% Similarity=0.379 Sum_probs=68.5
Q ss_pred hhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecc-cccchhhhhhhcccCC-cchhhhhhhhhhhhhhh
Q 007128 459 LRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRG-LIGSIHNWCEAYSTYP-RTYDLLHAWTVFSDIEK 535 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rg-l~~~~~~~~e~~~~~p-~tfDlvh~~~~~~~~~~ 535 (617)
-.+|||+|||+|.++..| +. .+|+.+|. +.+++.+.++. -+..++.-.+.++ ++ ++||+|.+..++.|+.
T Consensus 37 ~~~vLdiG~G~G~~~~~l---~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~~~- 109 (211)
T 2gs9_A 37 GESLLEVGAGTGYWLRRL---PY--PQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALP-FPGESFDVVLLFTTLEFVE- 109 (211)
T ss_dssp CSEEEEETCTTCHHHHHC---CC--SEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCC-SCSSCEEEEEEESCTTTCS-
T ss_pred CCeEEEECCCCCHhHHhC---CC--CeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCC-CCCCcEEEEEEcChhhhcC-
Confidence 347999999999999998 33 14556664 56776666652 1111111112233 33 8999999999999876
Q ss_pred cCCCcccchhhccccccCcceEEEecCh
Q 007128 536 RGCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 536 ~~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
++..+|.|+.|+|||||.+++.+..
T Consensus 110 ---~~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 110 ---DVERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp ---CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ---CHHHHHHHHHHHcCCCCEEEEEecC
Confidence 7889999999999999999998754
No 248
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.72 E-value=1e-09 Score=109.74 Aligned_cols=93 Identities=15% Similarity=0.075 Sum_probs=71.4
Q ss_pred eEEEeecccccccccccccc--------hhhhhccCCCccchhhhHHHHHhCCCccccccccccc---CCCC-Ccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--------DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRL---PYPS-RSFELAH 283 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--------~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~l---pf~~-~sFDlV~ 283 (617)
.+|||||||+|..+..|++. .|+++|+++.++..++ ....++.+.++|.... ++.+ .+||+|+
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~-----~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~ 157 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA-----SDMENITLHQGDCSDLTTFEHLREMAHPLIF 157 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG-----GGCTTEEEEECCSSCSGGGGGGSSSCSSEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh-----ccCCceEEEECcchhHHHHHhhccCCCCEEE
Confidence 58999999999998888653 5999999999887775 1234577888888773 5444 4799999
Q ss_pred ccccccccccccceEEEEecc-cccCCceeeecCh
Q 007128 284 CSRCRIDWLQRDGILLLELDR-LLRPGGYFAYSSP 317 (617)
Q Consensus 284 ~s~~l~h~~~~~~~~L~el~R-vLrPGG~lvis~p 317 (617)
+... | .+...+|.++.| +|||||++++.+.
T Consensus 158 ~d~~--~--~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 158 IDNA--H--ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp EESS--C--SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred ECCc--h--HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 7643 2 233568899997 9999999999764
No 249
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.72 E-value=3.6e-10 Score=120.99 Aligned_cols=115 Identities=17% Similarity=0.220 Sum_probs=84.2
Q ss_pred hhHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CCceEEEeec---------c-c----ccchhhhhhhcc-----c
Q 007128 460 RNLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PNTLKLIYDR---------G-L----IGSIHNWCEAYS-----T 516 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~~l~~~~~r---------g-l----~~~~~~~~e~~~-----~ 516 (617)
.+|||+|||+|.++..|++. +. .|+.+|. +.+++.+.++ | + +-.++.-.+.+. .
T Consensus 85 ~~VLDlGcG~G~~~~~la~~~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 85 ATVLDLGCGTGRDVYLASKLVGEHG---KVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp CEEEEESCTTSHHHHHHHHHHTTTC---EEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CEEEEecCccCHHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 46999999999999999874 44 4666664 5777777765 4 1 111111112221 2
Q ss_pred CC-cchhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecChh-----------------------HHHHHHHh
Q 007128 517 YP-RTYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS-----------------------VVDFVKKY 572 (617)
Q Consensus 517 ~p-~tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~-----------------------~~~~~~~~ 572 (617)
++ ++||+|+++.++.|+. ++..+|.|+.|+|||||++++.+... ..+++.++
T Consensus 162 ~~~~~fD~V~~~~~l~~~~----d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 237 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLST----NKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRL 237 (383)
T ss_dssp CCTTCEEEEEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHH
T ss_pred CCCCCEEEEEEccchhcCC----CHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHH
Confidence 44 8999999999999876 78899999999999999999986432 23778999
Q ss_pred hhhcccccc
Q 007128 573 LRALNWEAV 581 (617)
Q Consensus 573 ~~~~~w~~~ 581 (617)
+.+.+|+.+
T Consensus 238 l~~aGF~~v 246 (383)
T 4fsd_A 238 VAEAGFRDV 246 (383)
T ss_dssp HHHTTCCCE
T ss_pred HHHCCCceE
Confidence 999999865
No 250
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.71 E-value=7.9e-10 Score=110.73 Aligned_cols=101 Identities=17% Similarity=0.205 Sum_probs=72.8
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHh-------CC-Ccccccccccc-cC--CCCCcc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALER-------GI-PAYLGVLGTKR-LP--YPSRSF 279 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~r-------g~-~~~~~~~d~~~-lp--f~~~sF 279 (617)
..+|||||||+|.++..++.. .|+|+|+++.++..++.+....+ ++ ++.+..+|+.. ++ +++++|
T Consensus 50 ~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~ 129 (246)
T 2vdv_E 50 KVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQL 129 (246)
T ss_dssp CEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCE
T ss_pred CCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccccc
Confidence 368999999999999988864 49999999988877764433321 33 57788888775 66 778899
Q ss_pred ccccccccccccccc--------cceEEEEecccccCCceeeecC
Q 007128 280 ELAHCSRCRIDWLQR--------DGILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 280 DlV~~s~~l~h~~~~--------~~~~L~el~RvLrPGG~lvis~ 316 (617)
|.|+.... -.|... ...++.++.++|+|||+|++.+
T Consensus 130 d~v~~~~p-~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 130 SKMFFCFP-DPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp EEEEEESC-CCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CEEEEECC-CcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 99974321 111100 0258889999999999999953
No 251
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.71 E-value=1.1e-09 Score=102.76 Aligned_cols=110 Identities=12% Similarity=0.106 Sum_probs=79.4
Q ss_pred hhHHHhhhcchhhHhhhcCC--ceEEEEeecCCC-CCceEEEeec----cccc--chh-hhhhhcccCCcchhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDG-PNTLKLIYDR----GLIG--SIH-NWCEAYSTYPRTYDLLHAWTV 529 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~-~~~l~~~~~r----gl~~--~~~-~~~e~~~~~p~tfDlvh~~~~ 529 (617)
.+|||+|||+|.++..|++. +. .|+.+|. +.+++.+.++ |+-. .++ +..+.++..+++||+|.+...
T Consensus 27 ~~vldiG~G~G~~~~~l~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~~ 103 (178)
T 3hm2_A 27 ETLWDIGGGSGSIAIEWLRSTPQT---TAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGG 103 (178)
T ss_dssp EEEEEESTTTTHHHHHHHTTSSSE---EEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC-
T ss_pred CeEEEeCCCCCHHHHHHHHHCCCC---eEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECCc
Confidence 46999999999999999887 44 5667774 5677776654 3310 222 333445544489999998877
Q ss_pred hhhhhhcCCCcccchhhccccccCcceEEEecCh-hHHHHHHHhhhhccccc
Q 007128 530 FSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ-SVVDFVKKYLRALNWEA 580 (617)
Q Consensus 530 ~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~-~~~~~~~~~~~~~~w~~ 580 (617)
+.+ ..++.++.|+|||||.+++.+.. .....+..+++..+++.
T Consensus 104 ~~~--------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~ 147 (178)
T 3hm2_A 104 LTA--------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTI 147 (178)
T ss_dssp TTC--------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEE
T ss_pred ccH--------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCee
Confidence 763 57999999999999999998763 45566777787777665
No 252
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.71 E-value=4.9e-10 Score=116.14 Aligned_cols=117 Identities=9% Similarity=-0.043 Sum_probs=83.4
Q ss_pred cchhhHHHhhhcchhhHhhhcCC-ceEEEEeecCCC-CCceEEEeec----ccccchhhhhhhccc--CC-cchhhhhhh
Q 007128 457 NSLRNLMDMKAHLGSFAAALKEK-DVWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWCEAYST--YP-RTYDLLHAW 527 (617)
Q Consensus 457 ~~~r~vLD~g~G~G~fa~~L~~~-~~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~e~~~~--~p-~tfDlvh~~ 527 (617)
..-.+|||+|||+|.++..|+++ +. .|+.+|. +.+++.|.++ |+-..+...+.++.. ++ ++||+|++.
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~ 192 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGS---RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNN 192 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEEC
Confidence 34457999999999999999987 65 4566664 5777666654 332112222222222 34 899999999
Q ss_pred hhhhhhhhcCCCcccchhhccccccCcceEEEecChh-----------------------HHHHHHHhhhhcccccc
Q 007128 528 TVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS-----------------------VVDFVKKYLRALNWEAV 581 (617)
Q Consensus 528 ~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~-----------------------~~~~~~~~~~~~~w~~~ 581 (617)
.++.|+ ++..+|.|+.|+|||||++++.+... ..+++.+++++.+++.+
T Consensus 193 ~~l~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~ 264 (312)
T 3vc1_A 193 ESTMYV-----DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPH 264 (312)
T ss_dssp SCGGGS-----CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEE
T ss_pred CchhhC-----CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEE
Confidence 999976 38899999999999999999877321 23567788888888764
No 253
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.71 E-value=7.6e-10 Score=108.97 Aligned_cols=96 Identities=13% Similarity=0.114 Sum_probs=68.7
Q ss_pred eeEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCCCcccccccccccC---CCCCccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLP---YPSRSFELAHCSR 286 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lp---f~~~sFDlV~~s~ 286 (617)
+.+|||+|||+|.++..|++. .|+++|+++.++..+. +.+... .++.+..+|+.... ...++||+|++..
T Consensus 74 ~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~-~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~ 151 (227)
T 1g8a_A 74 GKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELV-PIVEER-RNIVPILGDATKPEEYRALVPKVDVIFEDV 151 (227)
T ss_dssp TCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHH-HHHSSC-TTEEEEECCTTCGGGGTTTCCCEEEEEECC
T ss_pred CCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHH-HHHhcc-CCCEEEEccCCCcchhhcccCCceEEEECC
Confidence 368999999999999988754 5899999987776655 333332 45677777776532 1235899999654
Q ss_pred cccccccccceEEEEecccccCCceeeec
Q 007128 287 CRIDWLQRDGILLLELDRLLRPGGYFAYS 315 (617)
Q Consensus 287 ~l~h~~~~~~~~L~el~RvLrPGG~lvis 315 (617)
. .......++.++.++|||||++++.
T Consensus 152 ~---~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 152 A---QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp C---STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred C---CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 3 1111123589999999999999997
No 254
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.71 E-value=9.3e-10 Score=110.26 Aligned_cols=101 Identities=16% Similarity=0.073 Sum_probs=70.3
Q ss_pred eeEEEeecccccccccccccc------hhhhhccCCCccchhhhHHHHHh--CC--C-----------------------
Q 007128 215 LRTVLDVGCGVASFGAYLLSS------DVITMSLAPNDVHQNQIQFALER--GI--P----------------------- 261 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~------~V~gvDis~~dl~~a~~~~a~~r--g~--~----------------------- 261 (617)
..+|||+|||+|.++..++.. .|+|+|+++.++..++....... ++ .
T Consensus 52 ~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (250)
T 1o9g_A 52 PVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQAA 131 (250)
T ss_dssp CEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhhh
Confidence 478999999999998888754 58999999988877764332210 11 1
Q ss_pred --cc-------------cccccccccCC-----CCCcccccccccccccccc--------ccceEEEEecccccCCceee
Q 007128 262 --AY-------------LGVLGTKRLPY-----PSRSFELAHCSRCRIDWLQ--------RDGILLLELDRLLRPGGYFA 313 (617)
Q Consensus 262 --~~-------------~~~~d~~~lpf-----~~~sFDlV~~s~~l~h~~~--------~~~~~L~el~RvLrPGG~lv 313 (617)
+. +..+|+..... ..++||+|+|+..+++... ....++.++.++|+|||+++
T Consensus 132 ~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 211 (250)
T 1o9g_A 132 RRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIA 211 (250)
T ss_dssp HHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred hhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEE
Confidence 34 66677655321 3458999998765333221 11368899999999999999
Q ss_pred ec
Q 007128 314 YS 315 (617)
Q Consensus 314 is 315 (617)
++
T Consensus 212 ~~ 213 (250)
T 1o9g_A 212 VT 213 (250)
T ss_dssp EE
T ss_pred Ee
Confidence 95
No 255
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.70 E-value=2.1e-09 Score=113.16 Aligned_cols=101 Identities=14% Similarity=0.104 Sum_probs=73.3
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHH----hCCCccccccccccc--CCCCCccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALE----RGIPAYLGVLGTKRL--PYPSRSFELAHC 284 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~----rg~~~~~~~~d~~~l--pf~~~sFDlV~~ 284 (617)
..+|||||||+|.++..|+++ .|+++|+++.++..++..+... ...++.+..+|+... .+++++||+|++
T Consensus 121 ~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~ 200 (334)
T 1xj5_A 121 PKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIV 200 (334)
T ss_dssp CCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEE
T ss_pred CCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEE
Confidence 468999999999999998865 5899999998887777443321 123577777886653 234678999997
Q ss_pred cccccccc--cc--cceEEEEecccccCCceeeecC
Q 007128 285 SRCRIDWL--QR--DGILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 285 s~~l~h~~--~~--~~~~L~el~RvLrPGG~lvis~ 316 (617)
... .++. .. ...+++++.++|+|||++++..
T Consensus 201 d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 201 DSS-DPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp CCC-CTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCC-CccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 533 2221 11 2468899999999999999964
No 256
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.70 E-value=2.1e-09 Score=108.34 Aligned_cols=165 Identities=13% Similarity=0.032 Sum_probs=102.6
Q ss_pred hhHHHHHHHHHHHHHhhccccCccchhhHHHhhhcchhhHhhhcCC--ceEEEEeecCCC-CCceEEEeec----cc--c
Q 007128 434 KDTESWRNRVDSYWNLLSPKIQSNSLRNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDG-PNTLKLIYDR----GL--I 504 (617)
Q Consensus 434 ~D~~~Wk~~V~~y~~~l~~~i~~~~~r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~-~~~l~~~~~r----gl--~ 504 (617)
...+.|..++..-...+.. +....-.+|||+|||+|.++..|+.. +. .|+.+|. +.+++++.++ |+ +
T Consensus 57 ~~~~~~~~~~~ds~~~l~~-~~~~~~~~vLDiG~G~G~~~i~la~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~l~~v 132 (249)
T 3g89_A 57 GEEEVVVKHFLDSLTLLRL-PLWQGPLRVLDLGTGAGFPGLPLKIVRPEL---ELVLVDATRKKVAFVERAIEVLGLKGA 132 (249)
T ss_dssp CHHHHHHHHHHHHHGGGGS-SCCCSSCEEEEETCTTTTTHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHTCSSE
T ss_pred CHHHHhhceeeechhhhcc-cccCCCCEEEEEcCCCCHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHhCCCce
Confidence 3456676655443333322 21223346999999999999888764 44 4566663 5666666554 43 3
Q ss_pred cchhhhhhhccc---CCcchhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecC---hhHHHHHHHhhhhccc
Q 007128 505 GSIHNWCEAYST---YPRTYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDK---QSVVDFVKKYLRALNW 578 (617)
Q Consensus 505 ~~~~~~~e~~~~---~p~tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~---~~~~~~~~~~~~~~~w 578 (617)
-.++.-.+.++. ++.+||+|.|..+ .++..++.++.|+|||||.+++-.. .+.+.+++..++.++|
T Consensus 133 ~~~~~d~~~~~~~~~~~~~fD~I~s~a~--------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~ 204 (249)
T 3g89_A 133 RALWGRAEVLAREAGHREAYARAVARAV--------APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGG 204 (249)
T ss_dssp EEEECCHHHHTTSTTTTTCEEEEEEESS--------CCHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTE
T ss_pred EEEECcHHHhhcccccCCCceEEEECCc--------CCHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCC
Confidence 333433344432 3489999998543 2567899999999999999988664 3455567777888888
Q ss_pred ccccccccCCCCCCCCCCeEEEEEEecccccCCC
Q 007128 579 EAVATTADASSDSDKDGDEVVFIVQKKIWLTSES 612 (617)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~l~~~K~~w~~~~~ 612 (617)
+.. ++.+- .-++......+++.+|.-.++...
T Consensus 205 ~~~-~~~~~-~~p~~~~~R~l~~~~k~~~t~~~y 236 (249)
T 3g89_A 205 RLG-EVLAL-QLPLSGEARHLVVLEKTAPTPPAY 236 (249)
T ss_dssp EEE-EEEEE-ECTTTCCEEEEEEEEECSCCCTTC
T ss_pred eEE-EEEEe-eCCCCCCcEEEEEEEeCCCCCCCC
Confidence 874 44321 122223455677778866555443
No 257
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.70 E-value=2.8e-10 Score=117.08 Aligned_cols=94 Identities=13% Similarity=0.069 Sum_probs=67.6
Q ss_pred chhhHHHhhhcchhhHhhhc---CCceEEEEeecCCC-CCceEEEeec-----ccccchhhhh---hhcccCC------c
Q 007128 458 SLRNLMDMKAHLGSFAAALK---EKDVWVMSVVPEDG-PNTLKLIYDR-----GLIGSIHNWC---EAYSTYP------R 519 (617)
Q Consensus 458 ~~r~vLD~g~G~G~fa~~L~---~~~~~v~~v~~~~~-~~~l~~~~~r-----gl~~~~~~~~---e~~~~~p------~ 519 (617)
.-.+|||+|||+|.++..|+ ..+. +|+.+|. +.+++.|.++ |....++..+ +.++.-+ +
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 112 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFE---QIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQ 112 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCS---EEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCC---EEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCC
Confidence 34579999999999999999 5555 5666664 5777776655 2211222111 2222112 6
Q ss_pred chhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEE
Q 007128 520 TYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVII 559 (617)
Q Consensus 520 tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii 559 (617)
+||+|+|..+++|+ ++..+|.++.|+|||||.+++
T Consensus 113 ~fD~V~~~~~l~~~-----~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 113 KIDMITAVECAHWF-----DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CEEEEEEESCGGGS-----CHHHHHHHHHHHEEEEEEEEE
T ss_pred CeeEEeHhhHHHHh-----CHHHHHHHHHHhcCCCcEEEE
Confidence 99999999999966 788999999999999999998
No 258
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.70 E-value=1e-09 Score=115.81 Aligned_cols=91 Identities=12% Similarity=0.116 Sum_probs=71.3
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCcccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDW 291 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~ 291 (617)
.+|||||||+|.++..++++ .++++|+ +.++..++. . .++.+..+|+.. ++++ ||+|++..+++||
T Consensus 190 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~-~~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~ 259 (352)
T 1fp2_A 190 ESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG-----S-NNLTYVGGDMFT-SIPN--ADAVLLKYILHNW 259 (352)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-----B-TTEEEEECCTTT-CCCC--CSEEEEESCGGGS
T ss_pred ceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc-----C-CCcEEEeccccC-CCCC--ccEEEeehhhccC
Confidence 68999999999999998864 4888888 766655542 1 236777788765 6663 9999999997777
Q ss_pred ccccc--eEEEEecccccC---CceeeecCh
Q 007128 292 LQRDG--ILLLELDRLLRP---GGYFAYSSP 317 (617)
Q Consensus 292 ~~~~~--~~L~el~RvLrP---GG~lvis~p 317 (617)
.+. . .+|+++.++||| ||++++..+
T Consensus 260 ~d~-~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 260 TDK-DCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp CHH-HHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred CHH-HHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 544 4 799999999999 999998754
No 259
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.69 E-value=4.9e-10 Score=111.84 Aligned_cols=101 Identities=12% Similarity=0.056 Sum_probs=66.8
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc-----ccc-hhhhhhhcccCC-cchhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL-----IGS-IHNWCEAYSTYP-RTYDLLHAWTVFS 531 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl-----~~~-~~~~~e~~~~~p-~tfDlvh~~~~~~ 531 (617)
.+|||||||+|.++.+|++... -+|+.+|. +.+++.|.++.- +-. ..+|.+-...++ .+||.|..+.+..
T Consensus 62 ~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~ 139 (236)
T 3orh_A 62 GRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp EEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeeec
Confidence 3699999999999999998754 25666664 678877766532 111 123333333454 8888886433322
Q ss_pred hh-hhcCCCcccchhhccccccCcceEEEecC
Q 007128 532 DI-EKRGCSGEDLLLEMDRILRPTGFVIIRDK 562 (617)
Q Consensus 532 ~~-~~~~c~~~~~l~Em~RiLrPgG~~ii~~~ 562 (617)
.. ..+.-+.+.++.|+.|+|||||.|++.+.
T Consensus 140 ~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~ 171 (236)
T 3orh_A 140 SEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp BGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred ccchhhhcchhhhhhhhhheeCCCCEEEEEec
Confidence 11 01222678899999999999999998763
No 260
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.69 E-value=3.1e-09 Score=108.45 Aligned_cols=97 Identities=13% Similarity=0.078 Sum_probs=76.9
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC-CcccccccccccCCCCCccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRLPYPSRSFELAHCSRCRID 290 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h 290 (617)
.+|||+|||+|.++..++.. .|+++|+++.++..++. .+...++ ++.+..+|+..++. .++||+|++....
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~-n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~-- 196 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCE-NIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH-- 196 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHH-HHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS--
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc--
Confidence 68999999999999999875 59999999988887774 4444554 56788888887744 5789999876432
Q ss_pred cccccceEEEEecccccCCceeeecChhh
Q 007128 291 WLQRDGILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 291 ~~~~~~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
....++.++.++|+|||+++++....
T Consensus 197 ---~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 197 ---KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp ---SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ---cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 33568889999999999999986554
No 261
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.69 E-value=1.3e-09 Score=107.82 Aligned_cols=98 Identities=14% Similarity=0.160 Sum_probs=72.6
Q ss_pred eEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCCC---ccccccccccc-C-CCCCcccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGIP---AYLGVLGTKRL-P-YPSRSFELAHCS 285 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~~---~~~~~~d~~~l-p-f~~~sFDlV~~s 285 (617)
.+|||||||+|..+..|++. .|+++|+++.++..++. ...+.++. +.+..+|+..+ + +++++||+|++.
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~-~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKA-LFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHH-HHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 48999999999998888763 58999999988887774 34444443 67777776553 2 346899999875
Q ss_pred ccccccccccceEEEEecccccCCceeeecChh
Q 007128 286 RCRIDWLQRDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 286 ~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
.. ......++.++.++|||||++++....
T Consensus 137 ~~----~~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 137 VS----PMDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp CC----TTTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred Cc----HHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 43 122235788999999999999996543
No 262
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.69 E-value=8.6e-10 Score=111.75 Aligned_cols=103 Identities=11% Similarity=0.020 Sum_probs=73.1
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHH---hCCC--ccccccccccc-------CCCCCc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALE---RGIP--AYLGVLGTKRL-------PYPSRS 278 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~---rg~~--~~~~~~d~~~l-------pf~~~s 278 (617)
..+|||+|||+|.++..|+.+ .|+++|+++.++..++.. +.. .++. +.+..+|+..+ ++++++
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n-~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 115 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRS-LELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEH 115 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHH-TTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTC
T ss_pred CCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHH-HHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCC
Confidence 468999999999999888765 589999998877776633 333 3333 66777887766 366789
Q ss_pred ccccccccccccc-----------------ccccceEEEEecccccCCceeeecChh
Q 007128 279 FELAHCSRCRIDW-----------------LQRDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 279 FDlV~~s~~l~h~-----------------~~~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
||+|+|+...... ......+++++.++|||||+|++..+.
T Consensus 116 fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 172 (260)
T 2ozv_A 116 FHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRP 172 (260)
T ss_dssp EEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred cCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcH
Confidence 9999987322111 011234688889999999999986443
No 263
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.68 E-value=3.7e-10 Score=117.27 Aligned_cols=101 Identities=9% Similarity=0.056 Sum_probs=70.2
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc----------------ccchhhhh--hhcc-cCC-
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL----------------IGSIHNWC--EAYS-TYP- 518 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl----------------~~~~~~~~--e~~~-~~p- 518 (617)
.+|||+|||+|+....++..+.. +|+.+|. +.|++.|.+|.- .+.++.-+ +.++ .+|
T Consensus 50 ~~VLDlGCG~G~~l~~~~~~~~~--~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 50 RKVLAIDFGNGADLEKYFYGEIA--LLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp CEEEETTCTTTTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CeEEEEecCCcHhHHHHHhcCCC--eEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 46999999999877666555432 5777774 689888887631 11111111 3332 234
Q ss_pred cchhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecCh
Q 007128 519 RTYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 519 ~tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
++||+|.|..+++++... .+...+|.|+.|+|||||+|++..+.
T Consensus 128 ~~FD~V~~~~~lhy~~~~-~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHP-RHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SCEEEEEEESCGGGTCST-TTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCeeEEEECchHHHhCCH-HHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 899999998888765322 25679999999999999999998764
No 264
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.68 E-value=6.1e-10 Score=105.54 Aligned_cols=130 Identities=18% Similarity=0.223 Sum_probs=83.8
Q ss_pred hhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc----ccch-hhhhhhcccCCcchhhhhhhh
Q 007128 459 LRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL----IGSI-HNWCEAYSTYPRTYDLLHAWT 528 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl----~~~~-~~~~e~~~~~p~tfDlvh~~~ 528 (617)
-.+|||+|||+|.++..+++.+. +|+.+|. +.+++.+.++ |+ +-.+ .++.+.++ +++||+|.++.
T Consensus 53 ~~~vLdiG~G~G~~~~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~~ 127 (194)
T 1dus_A 53 DDDILDLGCGYGVIGIALADEVK---STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--DRKYNKIITNP 127 (194)
T ss_dssp TCEEEEETCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--TSCEEEEEECC
T ss_pred CCeEEEeCCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--cCCceEEEECC
Confidence 34799999999999999998855 5666663 5666655554 22 1111 12222222 37999999987
Q ss_pred hhhhhhhcCCCcccchhhccccccCcceEEEecChh-HHHHHHHhhhhcccccccccccCCCCCCCCCCeEEEEEEe
Q 007128 529 VFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS-VVDFVKKYLRALNWEAVATTADASSDSDKDGDEVVFIVQK 604 (617)
Q Consensus 529 ~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~-~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~~~K 604 (617)
.+.+.. -+...++.++.|+|||||.+++..... ...++.+.++.. +..+ ++.. . ...-.++.++|
T Consensus 128 ~~~~~~---~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~-~~~~-~~~~--~----~~~~~~~~~~k 193 (194)
T 1dus_A 128 PIRAGK---EVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDV-FGNV-ETVT--I----KGGYRVLKSKK 193 (194)
T ss_dssp CSTTCH---HHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHH-HSCC-EEEE--E----ETTEEEEEEEC
T ss_pred Ccccch---hHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHH-hcce-EEEe--c----CCcEEEEEEee
Confidence 776411 145689999999999999999988765 344466666666 4333 3332 1 23456666665
No 265
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.68 E-value=2.7e-10 Score=117.28 Aligned_cols=87 Identities=14% Similarity=0.279 Sum_probs=53.6
Q ss_pred Ccchhhhhhhhhhhhhh--hcCCCcccchhhccccccCcceEEEecChh------------H----------HHHHHHhh
Q 007128 518 PRTYDLLHAWTVFSDIE--KRGCSGEDLLLEMDRILRPTGFVIIRDKQS------------V----------VDFVKKYL 573 (617)
Q Consensus 518 p~tfDlvh~~~~~~~~~--~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~------------~----------~~~~~~~~ 573 (617)
+++||+|.|..++.|++ ....++..++.++.|+|||||+|+|....- . -+++..++
T Consensus 175 ~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L 254 (292)
T 3g07_A 175 TPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYL 254 (292)
T ss_dssp CCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHH
T ss_pred CCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHH
Confidence 38999999999987653 122356789999999999999999964321 0 12466777
Q ss_pred hh--cccccccccccCCCCCCCCCCeEEEEEEec
Q 007128 574 RA--LNWEAVATTADASSDSDKDGDEVVFIVQKK 605 (617)
Q Consensus 574 ~~--~~w~~~~~~~~~~~~~~~~~~~~~l~~~K~ 605 (617)
.+ .+++.+ ++++........=+..+++++|+
T Consensus 255 ~~~~~GF~~~-~~~~~~~~~~~g~~r~i~~~~k~ 287 (292)
T 3g07_A 255 TSPDVGFSSY-ELVATPHNTSKGFQRPVYLFHKA 287 (292)
T ss_dssp TSTTTCCCEE-EEC-----------CCCEEEECC
T ss_pred HhcCCCceEE-EEeccCCCCCCCccceEEEEEcC
Confidence 77 888665 33331001111223446666664
No 266
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.68 E-value=3.4e-10 Score=109.40 Aligned_cols=134 Identities=13% Similarity=0.147 Sum_probs=83.7
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc----ccchh-hhhhhcccCC-cchhhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL----IGSIH-NWCEAYSTYP-RTYDLLHAWTVFSD 532 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl----~~~~~-~~~e~~~~~p-~tfDlvh~~~~~~~ 532 (617)
.+|||+|||+|.++..|++.+.. +|+.+|. +.+++.+.++.- +-.+. +. +.++ ++ ++||+|.+..+|.+
T Consensus 44 ~~vLdiGcG~G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~-~~~~-~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 44 DRILVLGCGNSALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAHVPQLRWETMDV-RKLD-FPSASFDVVLEKGTLDA 119 (215)
T ss_dssp CCEEEETCTTCSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTTCTTCEEEECCT-TSCC-SCSSCEEEEEEESHHHH
T ss_pred CeEEEECCCCcHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhcccCCCcEEEEcch-hcCC-CCCCcccEEEECcchhh
Confidence 46999999999999999987642 4556663 566665555421 11111 21 1222 33 89999999888876
Q ss_pred hh-----------hcCCCcccchhhccccccCcceEEEecChhHHHHHHHhhhh--cccccccccccCCCCCCCCCCeEE
Q 007128 533 IE-----------KRGCSGEDLLLEMDRILRPTGFVIIRDKQSVVDFVKKYLRA--LNWEAVATTADASSDSDKDGDEVV 599 (617)
Q Consensus 533 ~~-----------~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~~~~~~~~~~~~--~~w~~~~~~~~~~~~~~~~~~~~~ 599 (617)
+. .+..+...+|.|+.|+|||||.+++.+..... ..+.++.. ..|+. .... .+. ....++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~-~~~~~~~~~~~~~~~--~~~~--~~~--~~~~~~ 192 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPH-FRTRHYAQAYYGWSL--RHAT--YGS--GFHFHL 192 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCHH-HHHHHHCCGGGCEEE--EEEE--ESG--GGCEEE
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCcH-HHHHHHhccccCcEE--EEEE--ecC--cceEEE
Confidence 53 11224578999999999999999999875422 23344433 35665 2221 111 234556
Q ss_pred EEEEe
Q 007128 600 FIVQK 604 (617)
Q Consensus 600 l~~~K 604 (617)
.+++|
T Consensus 193 ~~~~~ 197 (215)
T 2pxx_A 193 YLMHK 197 (215)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77766
No 267
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.68 E-value=8e-10 Score=109.78 Aligned_cols=96 Identities=8% Similarity=0.092 Sum_probs=72.9
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC--Ccccccccccc-cC-CCCCcccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKR-LP-YPSRSFELAHCSRC 287 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~-lp-f~~~sFDlV~~s~~ 287 (617)
.+|||||||+|.++..|+.. .|+++|+++.++..++. ...+.++ ++.+..+|+.. ++ ..+++||+|++...
T Consensus 73 ~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~ 151 (232)
T 3ntv_A 73 KNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQ-NLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDAA 151 (232)
T ss_dssp CEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHH-HHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEETT
T ss_pred CEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcCc
Confidence 58999999999999888872 58999999988887774 3444454 47788888755 34 34689999996532
Q ss_pred ccccccccceEEEEecccccCCceeeecC
Q 007128 288 RIDWLQRDGILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 288 l~h~~~~~~~~L~el~RvLrPGG~lvis~ 316 (617)
......++.++.++|||||++++..
T Consensus 152 ----~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 152 ----KAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp ----SSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred ----HHHHHHHHHHHHHhcCCCeEEEEee
Confidence 2223458899999999999999953
No 268
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.68 E-value=1.1e-09 Score=112.11 Aligned_cols=127 Identities=13% Similarity=0.025 Sum_probs=78.0
Q ss_pred eEEEeecccccccccccccc---hhhhhcc-CCCccchhhhHHH----HHhCC------Cccccccccc----ccCC--C
Q 007128 216 RTVLDVGCGVASFGAYLLSS---DVITMSL-APNDVHQNQIQFA----LERGI------PAYLGVLGTK----RLPY--P 275 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~---~V~gvDi-s~~dl~~a~~~~a----~~rg~------~~~~~~~d~~----~lpf--~ 275 (617)
.+|||||||+|.++..++.. .|+++|+ ++.++..++.+.. ...++ ++.+...+.. .+.. +
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 160 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCTG 160 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHHS
T ss_pred CeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhcc
Confidence 58999999999998887764 5899999 7888877764331 22222 2334322221 1210 3
Q ss_pred CCccccccccccccccccccceEEEEeccccc---C--CceeeecChhhhcCCHHHHHHHHHHHHHHHHhh-hhhhh
Q 007128 276 SRSFELAHCSRCRIDWLQRDGILLLELDRLLR---P--GGYFAYSSPEAYAQDEEDLRIWKEMSALVERMC-WRIAA 346 (617)
Q Consensus 276 ~~sFDlV~~s~~l~h~~~~~~~~L~el~RvLr---P--GG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~g-f~~v~ 346 (617)
+++||+|+++.++++ ..+...++.++.++|+ | ||.+++........... ....+.+.+++.| |++..
T Consensus 161 ~~~fD~Ii~~dvl~~-~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~---~~~~~~~~l~~~G~f~v~~ 233 (281)
T 3bzb_A 161 LQRFQVVLLADLLSF-HQAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAE---RDLAFFRLVNADGALIAEP 233 (281)
T ss_dssp CSSBSEEEEESCCSC-GGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC-----------CTHHHHHHHHSTTEEEEE
T ss_pred CCCCCEEEEeCcccC-hHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccch---hHHHHHHHHHhcCCEEEEE
Confidence 578999999888554 4444679999999999 9 99876642221111000 0134455677788 86543
No 269
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.67 E-value=1.1e-09 Score=110.14 Aligned_cols=98 Identities=13% Similarity=0.094 Sum_probs=72.6
Q ss_pred eEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCC--Ccccccccccc-cCCC--CCcccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKR-LPYP--SRSFELAHCS 285 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~-lpf~--~~sFDlV~~s 285 (617)
.+|||||||+|..+..|++. .|+++|+++.++..++. .+.+.++ ++.+..+|+.. ++.. .++||+|++.
T Consensus 65 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~-~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d 143 (248)
T 3tfw_A 65 KRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARE-NLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFID 143 (248)
T ss_dssp SEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHH-HHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEEC
T ss_pred CEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEEC
Confidence 68999999999998888764 58999999988877774 3344444 36777788755 4433 3489999975
Q ss_pred ccccccccccceEEEEecccccCCceeeecChh
Q 007128 286 RCRIDWLQRDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 286 ~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
.. ......++.++.++|||||++++....
T Consensus 144 ~~----~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 144 AD----KPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp SC----GGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred Cc----hHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 32 222245889999999999999986543
No 270
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.67 E-value=1.4e-09 Score=114.49 Aligned_cols=138 Identities=14% Similarity=0.183 Sum_probs=92.9
Q ss_pred cCccc-hhhHHHhhhcchhhHhhhcCC--ceEEEEeecCCCCCceEEEeec----ccccch----hhhhhhcccCCcchh
Q 007128 454 IQSNS-LRNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDGPNTLKLIYDR----GLIGSI----HNWCEAYSTYPRTYD 522 (617)
Q Consensus 454 i~~~~-~r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~~~~l~~~~~r----gl~~~~----~~~~e~~~~~p~tfD 522 (617)
+.... ..+|||+|||+|.++..|+++ +.. ++.+|.+.+++.+.++ |+-..+ +|..+.-+..|..||
T Consensus 174 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~---~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D 250 (352)
T 3mcz_A 174 LGVFARARTVIDLAGGHGTYLAQVLRRHPQLT---GQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAAD 250 (352)
T ss_dssp CGGGTTCCEEEEETCTTCHHHHHHHHHCTTCE---EEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEE
T ss_pred CCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCe---EEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCcc
Confidence 34444 678999999999999999875 443 3344445565555443 331111 122222111457899
Q ss_pred hhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecChh---------------------------HHHHHHHhhhh
Q 007128 523 LLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS---------------------------VVDFVKKYLRA 575 (617)
Q Consensus 523 lvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~---------------------------~~~~~~~~~~~ 575 (617)
+|++..+++|+... +...+|.++.|+|||||+++|.|..- ..+++++++++
T Consensus 251 ~v~~~~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 328 (352)
T 3mcz_A 251 VVMLNDCLHYFDAR--EAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRD 328 (352)
T ss_dssp EEEEESCGGGSCHH--HHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHH
T ss_pred EEEEecccccCCHH--HHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHH
Confidence 99999999977532 24789999999999999999976310 14468888999
Q ss_pred cccccccccccCCCCCCCCCCeEEEEEEec
Q 007128 576 LNWEAVATTADASSDSDKDGDEVVFIVQKK 605 (617)
Q Consensus 576 ~~w~~~~~~~~~~~~~~~~~~~~~l~~~K~ 605 (617)
.+++.+ +.. .+...+++++|+
T Consensus 329 aGf~~~-~~~--------~g~~~l~~a~kp 349 (352)
T 3mcz_A 329 AGLAVG-ERS--------IGRYTLLIGQRS 349 (352)
T ss_dssp TTCEEE-EEE--------ETTEEEEEEECC
T ss_pred CCCcee-eec--------cCceEEEEEecC
Confidence 999885 221 235789999985
No 271
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.67 E-value=2.4e-09 Score=102.96 Aligned_cols=90 Identities=12% Similarity=0.190 Sum_probs=65.0
Q ss_pred eEEEeecccccccccccccc------hhhhhccCCCccchhhhHHHHHhCCCcccccccccccC----------------
Q 007128 216 RTVLDVGCGVASFGAYLLSS------DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLP---------------- 273 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~------~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lp---------------- 273 (617)
.+|||+|||+|.++..++++ .|+|+|+++... ..++.+.++|+...+
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~-----------~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~ 92 (201)
T 2plw_A 24 KIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDP-----------IPNVYFIQGEIGKDNMNNIKNINYIDNMNNN 92 (201)
T ss_dssp EEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCC-----------CTTCEEEECCTTTTSSCCC-----------C
T ss_pred CEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCC-----------CCCceEEEccccchhhhhhccccccccccch
Confidence 68999999999999888753 489999998321 113456666766665
Q ss_pred ---------CCCCccccccccccccccc----ccc-------ceEEEEecccccCCceeeecCh
Q 007128 274 ---------YPSRSFELAHCSRCRIDWL----QRD-------GILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 274 ---------f~~~sFDlV~~s~~l~h~~----~~~-------~~~L~el~RvLrPGG~lvis~p 317 (617)
+++++||+|+|..+ .|+. .+. ..++.++.++|||||.|++..+
T Consensus 93 ~~~~~~~~~~~~~~fD~v~~~~~-~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 93 SVDYKLKEILQDKKIDIILSDAA-VPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhHHHHHhhcCCCcccEEEeCCC-cCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 56679999998765 3332 111 1378889999999999998643
No 272
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.67 E-value=1.3e-09 Score=110.00 Aligned_cols=120 Identities=13% Similarity=0.132 Sum_probs=83.3
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc---ccchh-hhhhhcccCC-cchhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL---IGSIH-NWCEAYSTYP-RTYDLLHAWTV 529 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl---~~~~~-~~~e~~~~~p-~tfDlvh~~~~ 529 (617)
.+|||+|||+|.++..|++++.. .|+.+|. +.+++.|.++ |+ +-.++ |..+....++ ++||+|.++-.
T Consensus 51 ~~vLDlG~G~G~~~~~la~~~~~--~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npP 128 (259)
T 3lpm_A 51 GKIIDLCSGNGIIPLLLSTRTKA--KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPP 128 (259)
T ss_dssp CEEEETTCTTTHHHHHHHTTCCC--EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCC
T ss_pred CEEEEcCCchhHHHHHHHHhcCC--cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCC
Confidence 46999999999999999988543 6778885 5666666554 32 22222 2222222243 89999998644
Q ss_pred hhhh----------------hhcCCCcccchhhccccccCcceEEEecChhHHHHHHHhhhhcccccc
Q 007128 530 FSDI----------------EKRGCSGEDLLLEMDRILRPTGFVIIRDKQSVVDFVKKYLRALNWEAV 581 (617)
Q Consensus 530 ~~~~----------------~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~~~~~~~~~~~~~~w~~~ 581 (617)
|... +...+++..++.++.|+|||||.+++..+.....++...+...+|...
T Consensus 129 y~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~~~~~ 196 (259)
T 3lpm_A 129 YFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPK 196 (259)
T ss_dssp C-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTTEEEE
T ss_pred CCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCCCceE
Confidence 4221 011234568999999999999999999888888889999988888763
No 273
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.67 E-value=2e-09 Score=118.80 Aligned_cols=98 Identities=12% Similarity=0.208 Sum_probs=73.9
Q ss_pred eEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCC--CcccccccccccCCCCCccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRLPYPSRSFELAHCSRCRID 290 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h 290 (617)
.+|||||||+|.++..+++. .|+++|+++ ++..++ +.+...++ ++.+..+|...++++ ++||+|+|.....+
T Consensus 160 ~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~-~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~~~ 236 (480)
T 3b3j_A 160 KIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAE-VLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYM 236 (480)
T ss_dssp CEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHH-HHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCHHH
T ss_pred CEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHH-HHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCchHh
Confidence 68999999999999888764 589999988 776555 44444554 477888888887766 58999998765444
Q ss_pred cccc-cceEEEEecccccCCceeeecC
Q 007128 291 WLQR-DGILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 291 ~~~~-~~~~L~el~RvLrPGG~lvis~ 316 (617)
+... ....+.++.++|+|||++++..
T Consensus 237 ~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 237 LFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp HTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred cCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 4322 2346668899999999999753
No 274
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.66 E-value=1.1e-09 Score=111.84 Aligned_cols=103 Identities=17% Similarity=0.135 Sum_probs=71.3
Q ss_pred eeEEEeeccccc--cccccccc-----chhhhhccCCCccchhhhHHHHHhCCCcccccccccccC----CC--CCccc-
Q 007128 215 LRTVLDVGCGVA--SFGAYLLS-----SDVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLP----YP--SRSFE- 280 (617)
Q Consensus 215 ~~~VLDVGCG~G--~~~~~L~~-----~~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lp----f~--~~sFD- 280 (617)
.++|||||||++ ..+..+++ ..|+++|.|+.|+..++.........++.+.++|+.+++ .+ .++||
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~ 158 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDL 158 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCT
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCc
Confidence 468999999973 33444332 369999999999988875443221124778888887752 11 35566
Q ss_pred ----ccccccccccccccc---ceEEEEecccccCCceeeecChh
Q 007128 281 ----LAHCSRCRIDWLQRD---GILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 281 ----lV~~s~~l~h~~~~~---~~~L~el~RvLrPGG~lvis~p~ 318 (617)
.|+++. ++||..+. ..+++++.++|+|||+|+++...
T Consensus 159 ~~p~av~~~a-vLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~ 202 (277)
T 3giw_A 159 TRPVALTVIA-IVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGT 202 (277)
T ss_dssp TSCCEEEEES-CGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEEC
T ss_pred CCcchHHhhh-hHhcCCchhhHHHHHHHHHHhCCCCcEEEEEecc
Confidence 355554 47777663 35999999999999999998544
No 275
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.66 E-value=4.8e-10 Score=126.26 Aligned_cols=98 Identities=17% Similarity=0.143 Sum_probs=76.6
Q ss_pred eeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhC-CCccccccccccc--CCCCCcccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERG-IPAYLGVLGTKRL--PYPSRSFELAHCSRCRI 289 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg-~~~~~~~~d~~~l--pf~~~sFDlV~~s~~l~ 289 (617)
+.+|||||||.|.++..|++. .|+|+|+++.++..|+ ..|.+.+ +++.|.+++++++ ++.+++||+|+|..+++
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~e 145 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCR-ALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVFH 145 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCHH
T ss_pred CCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHH-HHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcchh
Confidence 358999999999999999987 5999999999999887 4555555 6889999999887 56778999999999876
Q ss_pred ccccccce--EEEEecccccCCceeee
Q 007128 290 DWLQRDGI--LLLELDRLLRPGGYFAY 314 (617)
Q Consensus 290 h~~~~~~~--~L~el~RvLrPGG~lvi 314 (617)
|..++ .. .+..+.+.|+++|..++
T Consensus 146 hv~~~-~~~~~~~~~~~tl~~~~~~~~ 171 (569)
T 4azs_A 146 HIVHL-HGIDEVKRLLSRLADVTQAVI 171 (569)
T ss_dssp HHHHH-HCHHHHHHHHHHHHHHSSEEE
T ss_pred cCCCH-HHHHHHHHHHHHhccccceee
Confidence 65443 22 23346666888876554
No 276
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.65 E-value=3.1e-09 Score=112.40 Aligned_cols=102 Identities=20% Similarity=0.059 Sum_probs=78.5
Q ss_pred eEEEeeccccccccccccc-----chhhhhccCCCccchhhhHHHHHhCC-CcccccccccccCCCCCcccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLS-----SDVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRLPYPSRSFELAHCSRCRI 289 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~-----~~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~lpf~~~sFDlV~~s~~l~ 289 (617)
.+|||+|||+|.++..++. ..++|+|+++.++..++. .+...++ .+.+.++|+..++.+.+.||+|+++...-
T Consensus 205 ~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~-n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npPyg 283 (354)
T 3tma_A 205 MRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLARE-AALASGLSWIRFLRADARHLPRFFPEVDRILANPPHG 283 (354)
T ss_dssp CCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHH-HHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECCCSC
T ss_pred CEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHH-HHHHcCCCceEEEeCChhhCccccCCCCEEEECCCCc
Confidence 6899999999999888876 358999999998888874 4555555 57888999999988778899999863311
Q ss_pred c-------cccccceEEEEecccccCCceeeecChh
Q 007128 290 D-------WLQRDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 290 h-------~~~~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
. +......++.++.++|+|||.+++.++.
T Consensus 284 ~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 284 LRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp C----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred CccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 1 1111145888999999999999997653
No 277
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.65 E-value=6e-09 Score=100.79 Aligned_cols=136 Identities=13% Similarity=0.121 Sum_probs=75.0
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCCCCceEEEeeccc---ccchhhhh--hhcc-cCC----cchhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDGPNTLKLIYDRGL---IGSIHNWC--EAYS-TYP----RTYDLLHAWTV 529 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~~~~l~~~~~rgl---~~~~~~~~--e~~~-~~p----~tfDlvh~~~~ 529 (617)
.+|||+|||+|+++..|++++.. |+.+|...+.. ..++ .+++.+.. +.+. .++ ++||+|.++..
T Consensus 27 ~~VLDlG~G~G~~s~~la~~~~~---V~gvD~~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~ 100 (191)
T 3dou_A 27 DAVIEIGSSPGGWTQVLNSLARK---IISIDLQEMEE---IAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAM 100 (191)
T ss_dssp CEEEEESCTTCHHHHHHTTTCSE---EEEEESSCCCC---CTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCC
T ss_pred CEEEEEeecCCHHHHHHHHcCCc---EEEEecccccc---CCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCCC
Confidence 46999999999999999998664 44444322111 0121 12222210 0000 011 48999987532
Q ss_pred --------hhhhhhcCCCcccchhhccccccCcceEEEecChh-HHHHHHHhhhhcccccccccccCCCCCCCCCCeEEE
Q 007128 530 --------FSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS-VVDFVKKYLRALNWEAVATTADASSDSDKDGDEVVF 600 (617)
Q Consensus 530 --------~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~-~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l 600 (617)
+.+.. .....+.+|.++.|+|||||.|++..... ....+...++. .++.+ ++..++. .-+...|.++
T Consensus 101 ~~~~g~~~~d~~~-~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~-~F~~v-~~~kP~a-sR~~s~E~y~ 176 (191)
T 3dou_A 101 AKVSGIPSRDHAV-SYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRK-NFSSY-KISKPPA-SRGSSSEIYI 176 (191)
T ss_dssp CCCCSCHHHHHHH-HHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGG-GEEEE-EEECC-------CCEEEE
T ss_pred cCCCCCcccCHHH-HHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHH-hcCEE-EEECCCC-ccCCCceEEE
Confidence 12111 00123578999999999999999766432 23345555544 35555 3332222 2336789999
Q ss_pred EEEec
Q 007128 601 IVQKK 605 (617)
Q Consensus 601 ~~~K~ 605 (617)
+|++.
T Consensus 177 v~~~~ 181 (191)
T 3dou_A 177 MFFGF 181 (191)
T ss_dssp EEEEE
T ss_pred EEeee
Confidence 99874
No 278
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.65 E-value=1.5e-09 Score=108.83 Aligned_cols=96 Identities=14% Similarity=0.045 Sum_probs=72.6
Q ss_pred eEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCC--Cccccccccccc-CCC-----CCccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRL-PYP-----SRSFELA 282 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~l-pf~-----~~sFDlV 282 (617)
.+|||||||+|..+..|++. .|+++|+++.++..++. .....++ ++.+..+|+... +.. +++||+|
T Consensus 62 ~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~-~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 62 KKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHP-YWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp SEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHH-HHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred CEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 58999999999998888762 59999999999988884 4444454 477777787553 221 4789999
Q ss_pred cccccccccccccceEEEEecccccCCceeeecC
Q 007128 283 HCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 283 ~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~ 316 (617)
++... ......++.++.++|||||++++..
T Consensus 141 ~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~ 170 (242)
T 3r3h_A 141 FIDAD----KTNYLNYYELALKLVTPKGLIAIDN 170 (242)
T ss_dssp EEESC----GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEcCC----hHHhHHHHHHHHHhcCCCeEEEEEC
Confidence 87543 2233457889999999999999854
No 279
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.65 E-value=1.2e-09 Score=115.62 Aligned_cols=129 Identities=16% Similarity=0.187 Sum_probs=86.3
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRID 290 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h 290 (617)
..+|||||||+|.++..++++ .++..|. |..+..++...+.....++.+..+|+...|.+ .+|+|++.+++++
T Consensus 180 ~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~vlh~ 256 (353)
T 4a6d_A 180 FPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILARVLHD 256 (353)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEESSGGG
T ss_pred CCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeeeeccc
Confidence 468999999999999999876 2445554 33444443222211223577888888766655 4799999999888
Q ss_pred ccccc-ceEEEEecccccCCceeeecChhhhc--CCHHHHHH---------------HHHHHHHHHHhhhhhhh
Q 007128 291 WLQRD-GILLLELDRLLRPGGYFAYSSPEAYA--QDEEDLRI---------------WKEMSALVERMCWRIAA 346 (617)
Q Consensus 291 ~~~~~-~~~L~el~RvLrPGG~lvis~p~~~~--~~~~~~~~---------------w~~l~~l~~~~gf~~v~ 346 (617)
|.++. ..+|++++++|+|||.++|....... ..+..... .+++.++++++||+.+.
T Consensus 257 ~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~ 330 (353)
T 4a6d_A 257 WADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQ 330 (353)
T ss_dssp SCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEE
T ss_pred CCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEE
Confidence 86653 35899999999999999986432211 11111111 16789999999997654
No 280
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.63 E-value=9.7e-10 Score=115.66 Aligned_cols=104 Identities=7% Similarity=-0.007 Sum_probs=74.9
Q ss_pred eeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCC---cccccccccccCC----CCCcccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIP---AYLGVLGTKRLPY----PSRSFELAHCS 285 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~---~~~~~~d~~~lpf----~~~sFDlV~~s 285 (617)
+.+|||+|||+|.++..++.. .|+++|+++.++..++.+ +...++. +.+.++|+..+.. .+++||+|++.
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n-~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~d 232 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKEN-QVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTD 232 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHH-HHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEEC
T ss_pred CCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHH-HHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEEC
Confidence 358999999999999988865 589999999888887743 4444543 6778888766432 14689999984
Q ss_pred cc---------ccccccccceEEEEecccccCCceeeecChhh
Q 007128 286 RC---------RIDWLQRDGILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 286 ~~---------l~h~~~~~~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
-- +.++..+...++.++.++|+|||++++.....
T Consensus 233 PP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 233 PPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp CCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 22 11223333468888999999999988765443
No 281
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.63 E-value=3.7e-09 Score=105.95 Aligned_cols=111 Identities=15% Similarity=0.164 Sum_probs=78.9
Q ss_pred HHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccccc
Q 007128 194 YIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKR 271 (617)
Q Consensus 194 Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~ 271 (617)
..+.+.+.+.. .. +.+|||+|||+|.++..|++. .|+++|+++.++..++.... ...++.+..+|+..
T Consensus 17 ~~~~i~~~~~~------~~--~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~~ 86 (245)
T 1yub_A 17 VLNQIIKQLNL------KE--TDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDILQ 86 (245)
T ss_dssp THHHHHHHCCC------CS--SEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCTT
T ss_pred HHHHHHHhcCC------CC--CCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhc--cCCceEEEECChhh
Confidence 44566666654 33 368999999999999999875 59999999998887764332 22357788899999
Q ss_pred cCCCC-Cccccccccc-----------cccccccccceEE----EEecccccCCceeeecC
Q 007128 272 LPYPS-RSFELAHCSR-----------CRIDWLQRDGILL----LELDRLLRPGGYFAYSS 316 (617)
Q Consensus 272 lpf~~-~sFDlV~~s~-----------~l~h~~~~~~~~L----~el~RvLrPGG~lvis~ 316 (617)
+++++ ++| .|+++. .+.| .......+ ..+.|+|+|||.+.+..
T Consensus 87 ~~~~~~~~f-~vv~n~Py~~~~~~~~~~~~~-~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 87 FQFPNKQRY-KIVGNIPYHLSTQIIKKVVFE-SRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp TTCCCSSEE-EEEEECCSSSCHHHHHHHHHH-CCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred cCcccCCCc-EEEEeCCccccHHHHHHHHhC-CCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 88874 689 555541 1122 12334566 55999999999988864
No 282
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.63 E-value=1.3e-09 Score=106.07 Aligned_cols=95 Identities=12% Similarity=0.150 Sum_probs=70.2
Q ss_pred eEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCC--Cccccccccccc-CCCCCcccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRL-PYPSRSFELAHCSRC 287 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~l-pf~~~sFDlV~~s~~ 287 (617)
.+|||||||+|..+..|++. .|+++|+++.++..++... ...++ .+.+..+|.... +..++ ||+|++...
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~~ 135 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRML-HDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDCD 135 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHH-HHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEETT
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHCCCCceEEEEEecHHHHhccCCC-CCEEEEcCC
Confidence 58999999999998888754 5899999998887776433 33343 366777776543 55556 999987632
Q ss_pred ccccccccceEEEEecccccCCceeeecC
Q 007128 288 RIDWLQRDGILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 288 l~h~~~~~~~~L~el~RvLrPGG~lvis~ 316 (617)
..+...+++++.++|||||++++..
T Consensus 136 ----~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 136 ----VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp ----TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred ----hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 2233468999999999999999854
No 283
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.63 E-value=6.6e-09 Score=109.48 Aligned_cols=138 Identities=10% Similarity=0.082 Sum_probs=88.4
Q ss_pred cCccchhhHHHhhhcchhhHhhhcCC--ceEEEEeecCCCCCceE--EEeecccccchhhhhhhc-ccCCcchhhhhhhh
Q 007128 454 IQSNSLRNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDGPNTLK--LIYDRGLIGSIHNWCEAY-STYPRTYDLLHAWT 528 (617)
Q Consensus 454 i~~~~~r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~~~~l~--~~~~rgl~~~~~~~~e~~-~~~p~tfDlvh~~~ 528 (617)
+......+|||+|||+|.++..|+++ ++. ++.+|.+.++. .+.+.|+-..+.....++ ...| +||+|.+..
T Consensus 180 ~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~---~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~p-~~D~v~~~~ 255 (348)
T 3lst_A 180 GDFPATGTVADVGGGRGGFLLTVLREHPGLQ---GVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREVP-HADVHVLKR 255 (348)
T ss_dssp SCCCSSEEEEEETCTTSHHHHHHHHHCTTEE---EEEEECHHHHTTCCCCCGGGTTSEEEEECCTTTCCC-CCSEEEEES
T ss_pred CCccCCceEEEECCccCHHHHHHHHHCCCCE---EEEecCHHHhhcccccccCCCCCeEEEecCCCCCCC-CCcEEEEeh
Confidence 34456678999999999999999874 443 33333322222 112224322122111222 3456 999999999
Q ss_pred hhhhhhhcCCCcccchhhccccccCcceEEEecChh-------------------------HHHHHHHhhhhcccccccc
Q 007128 529 VFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS-------------------------VVDFVKKYLRALNWEAVAT 583 (617)
Q Consensus 529 ~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~-------------------------~~~~~~~~~~~~~w~~~~~ 583 (617)
+++|.... +...+|.++.|+|||||+|+|.|... ..+++++++++.+|+.+ +
T Consensus 256 vlh~~~d~--~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~-~ 332 (348)
T 3lst_A 256 ILHNWGDE--DSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLD-R 332 (348)
T ss_dssp CGGGSCHH--HHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEE-E
T ss_pred hccCCCHH--HHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceE-E
Confidence 99976522 22589999999999999999977421 24578899999999986 4
Q ss_pred cccCCCCCCCCCCeEEEEEEe
Q 007128 584 TADASSDSDKDGDEVVFIVQK 604 (617)
Q Consensus 584 ~~~~~~~~~~~~~~~~l~~~K 604 (617)
+.. . .....++-++|
T Consensus 333 ~~~--~----~~~~~vie~~p 347 (348)
T 3lst_A 333 VVG--T----SSVMSIAVGVP 347 (348)
T ss_dssp EEE--C----SSSCEEEEEEE
T ss_pred EEE--C----CCCcEEEEEEe
Confidence 443 1 23445666654
No 284
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.62 E-value=8.6e-10 Score=109.44 Aligned_cols=102 Identities=13% Similarity=0.117 Sum_probs=66.9
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc-----ccchh-hhhhhcccCC-cchhhhhh-hhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL-----IGSIH-NWCEAYSTYP-RTYDLLHA-WTVF 530 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl-----~~~~~-~~~e~~~~~p-~tfDlvh~-~~~~ 530 (617)
.+|||+|||+|.++..|++.+.. +|+.+|. +.|++.|.++.- +-.++ ++.+....++ ++||+|++ ...+
T Consensus 62 ~~vLDiGcGtG~~~~~l~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~ 139 (236)
T 1zx0_A 62 GRVLEVGFGMAIAASKVQEAPID--EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp EEEEEECCTTSHHHHHHHTSCEE--EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CeEEEEeccCCHHHHHHHhcCCC--eEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCccc
Confidence 36999999999999999886552 6777774 688777766531 11222 2222112344 89999988 2222
Q ss_pred hhhhh-cCCCcccchhhccccccCcceEEEecChh
Q 007128 531 SDIEK-RGCSGEDLLLEMDRILRPTGFVIIRDKQS 564 (617)
Q Consensus 531 ~~~~~-~~c~~~~~l~Em~RiLrPgG~~ii~~~~~ 564 (617)
+... +.-+.+.++.|+.|+|||||++++.+...
T Consensus 140 -~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~ 173 (236)
T 1zx0_A 140 -SEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTS 173 (236)
T ss_dssp -BGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHH
T ss_pred -chhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCc
Confidence 1110 11133467999999999999999887543
No 285
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.61 E-value=7.5e-10 Score=108.22 Aligned_cols=97 Identities=15% Similarity=0.252 Sum_probs=67.9
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc-c-cchhhhhhhccc--CC-cchhhhhhhhhhh--
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL-I-GSIHNWCEAYST--YP-RTYDLLHAWTVFS-- 531 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl-~-~~~~~~~e~~~~--~p-~tfDlvh~~~~~~-- 531 (617)
.+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.++.- . ..+.-.+.++.. ++ ++||+|.+..++.
T Consensus 40 ~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~ 116 (227)
T 1ve3_A 40 GKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHF 116 (227)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGC
T ss_pred CeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhC
Confidence 4799999999999999998866 5666664 567666655420 0 111111122211 33 7999999988844
Q ss_pred hhhhcCCCcccchhhccccccCcceEEEecCh
Q 007128 532 DIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
+.. +...+|.++.|+|||||.+++.++.
T Consensus 117 ~~~----~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 117 EPL----ELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CHH----HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CHH----HHHHHHHHHHHHcCCCcEEEEEecC
Confidence 333 5678999999999999999998775
No 286
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.61 E-value=4.1e-09 Score=110.02 Aligned_cols=134 Identities=13% Similarity=0.167 Sum_probs=91.4
Q ss_pred CccchhhHHHhhhcchhhHhhhcCC--ceEEEEeecCCCCCceEEEeec----cc---cc-chhhhhhhcccCCcchhhh
Q 007128 455 QSNSLRNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDGPNTLKLIYDR----GL---IG-SIHNWCEAYSTYPRTYDLL 524 (617)
Q Consensus 455 ~~~~~r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~~~~l~~~~~r----gl---~~-~~~~~~e~~~~~p~tfDlv 524 (617)
.... .+|||+|||+|.++..|+++ +. .++.+|.+.+++.+.++ |+ +- ..+|..+ .+|..||+|
T Consensus 165 ~~~~-~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~D~v 237 (334)
T 2ip2_A 165 DFRG-RSFVDVGGGSGELTKAILQAEPSA---RGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQ---EVPSNGDIY 237 (334)
T ss_dssp CCTT-CEEEEETCTTCHHHHHHHHHCTTC---EEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTT---CCCSSCSEE
T ss_pred CCCC-CEEEEeCCCchHHHHHHHHHCCCC---EEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCC---CCCCCCCEE
Confidence 3444 78999999999999999865 34 34444445666666543 22 11 1122222 356889999
Q ss_pred hhhhhhhhhhhcCCCcccchhhccccccCcceEEEecChh-------------------------HHHHHHHhhhhcccc
Q 007128 525 HAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS-------------------------VVDFVKKYLRALNWE 579 (617)
Q Consensus 525 h~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~-------------------------~~~~~~~~~~~~~w~ 579 (617)
.+..+++|.... +...+|.++.|+|||||+++|.|..- ..+++++++++.+++
T Consensus 238 ~~~~vl~~~~~~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 315 (334)
T 2ip2_A 238 LLSRIIGDLDEA--ASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFA 315 (334)
T ss_dssp EEESCGGGCCHH--HHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEE
T ss_pred EEchhccCCCHH--HHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCc
Confidence 999999876422 23589999999999999999986421 245678888899998
Q ss_pred cccccccCCCCCCCCCCeEEEEEEe
Q 007128 580 AVATTADASSDSDKDGDEVVFIVQK 604 (617)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~l~~~K 604 (617)
.+ ++.. . .....++.++|
T Consensus 316 ~~-~~~~--~----~~~~~~i~~~~ 333 (334)
T 2ip2_A 316 VE-RIVD--L----PMETRMIVAAR 333 (334)
T ss_dssp EE-EEEE--E----TTTEEEEEEEE
T ss_pred ee-EEEE--C----CCCCEEEEEEe
Confidence 75 4443 1 22467888877
No 287
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.61 E-value=2.6e-09 Score=104.87 Aligned_cols=131 Identities=17% Similarity=0.173 Sum_probs=74.1
Q ss_pred hHHHhhhcchhhHhhhcCCceEEEEeecCCC-CC----ceEEEeecc-cccchhhhhhh--cccCCcchhhhhhhhhhhh
Q 007128 461 NLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PN----TLKLIYDRG-LIGSIHNWCEA--YSTYPRTYDLLHAWTVFSD 532 (617)
Q Consensus 461 ~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~----~l~~~~~rg-l~~~~~~~~e~--~~~~p~tfDlvh~~~~~~~ 532 (617)
+|||+|||+|.++..|++... ...|+.+|. +. +++.+..+. +.....|.... +..++++||+|.++.. .
T Consensus 60 ~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~~-~- 136 (210)
T 1nt2_A 60 RVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDIA-Q- 136 (210)
T ss_dssp EEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECCC-S-
T ss_pred EEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEecc-C-
Confidence 699999999999999887521 014666664 33 333333221 21111122111 1223589999998621 1
Q ss_pred hhhcCCCcccchhhccccccCcceEEEecChh----------HH-HHHHHhhhhcccccccccccCCCCCCCCCCeEEEE
Q 007128 533 IEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS----------VV-DFVKKYLRALNWEAVATTADASSDSDKDGDEVVFI 601 (617)
Q Consensus 533 ~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~----------~~-~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~ 601 (617)
+ -+...++.|+.|+|||||.+++.-... +. ++++. +++- ++.+ +..+ .++. ...-.+++
T Consensus 137 ---~-~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~-l~~~-f~~~-~~~~--~~p~-~~~h~~~~ 206 (210)
T 1nt2_A 137 ---K-NQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKE-MEGD-FKIV-KHGS--LMPY-HRDHIFIH 206 (210)
T ss_dssp ---T-THHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHH-HHTT-SEEE-EEEE--CTTT-CTTEEEEE
T ss_pred ---h-hHHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHH-HHhh-cEEe-eeec--CCCC-CCCcEEEE
Confidence 1 122345899999999999999973221 11 22333 4444 8876 4444 4342 23456777
Q ss_pred EEe
Q 007128 602 VQK 604 (617)
Q Consensus 602 ~~K 604 (617)
++|
T Consensus 207 ~~~ 209 (210)
T 1nt2_A 207 AYR 209 (210)
T ss_dssp EEE
T ss_pred EEc
Confidence 765
No 288
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.61 E-value=1.6e-09 Score=109.30 Aligned_cols=125 Identities=17% Similarity=0.180 Sum_probs=88.1
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc-ccchh-hhhhhcccCCcchhhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL-IGSIH-NWCEAYSTYPRTYDLLHAWTVFSD 532 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl-~~~~~-~~~e~~~~~p~tfDlvh~~~~~~~ 532 (617)
.+|||+|||+|.++.++++.+. .|+.+|. +.+++.+.++ |+ +-.++ ++.+.++ +.+||+|.++.++.+
T Consensus 122 ~~VLDiGcG~G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~--~~~fD~Vv~n~~~~~ 196 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALP--FGPFDLLVANLYAEL 196 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGG--GCCEEEEEEECCHHH
T ss_pred CEEEEecCCCcHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCc--CCCCCEEEECCcHHH
Confidence 4799999999999999998876 6667774 6777666654 32 22121 2222222 278999999766653
Q ss_pred hhhcCCCcccchhhccccccCcceEEEecCh-hHHHHHHHhhhhcccccccccccCCCCCCCCCCeEEEEEEe
Q 007128 533 IEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ-SVVDFVKKYLRALNWEAVATTADASSDSDKDGDEVVFIVQK 604 (617)
Q Consensus 533 ~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~-~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~~~K 604 (617)
+..++.++.|+|||||++++.+.. ...+++.+.+++.+|+.+ .+.. .+.-..|+++|
T Consensus 197 -------~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~-~~~~-------~~~W~~l~~~k 254 (254)
T 2nxc_A 197 -------HAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPL-EEAA-------EGEWVLLAYGR 254 (254)
T ss_dssp -------HHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEE-EEEE-------ETTEEEEEEEC
T ss_pred -------HHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEE-EEec-------cCCeEEEEEEC
Confidence 357899999999999999997643 457788999999999885 3332 23445666665
No 289
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.61 E-value=3.5e-09 Score=112.65 Aligned_cols=141 Identities=13% Similarity=0.135 Sum_probs=93.4
Q ss_pred cCccchhhHHHhhhcchhhHhhhcCC--ceEEEEeecCCCCCceEEEeec----ccccchhhhhhhc-ccCCcchhhhhh
Q 007128 454 IQSNSLRNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDGPNTLKLIYDR----GLIGSIHNWCEAY-STYPRTYDLLHA 526 (617)
Q Consensus 454 i~~~~~r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~~~~l~~~~~r----gl~~~~~~~~e~~-~~~p~tfDlvh~ 526 (617)
+......+|||+|||+|.++..|+++ ++. ++.+|.+.+++.+.++ |+-..+.....++ ..+|..||+|.+
T Consensus 198 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~---~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~~~D~v~~ 274 (369)
T 3gwz_A 198 YDFSGAATAVDIGGGRGSLMAAVLDAFPGLR---GTLLERPPVAEEARELLTGRGLADRCEILPGDFFETIPDGADVYLI 274 (369)
T ss_dssp SCCTTCSEEEEETCTTSHHHHHHHHHCTTCE---EEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCSSCSEEEE
T ss_pred CCCccCcEEEEeCCCccHHHHHHHHHCCCCe---EEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCCCCCCCCceEEEh
Confidence 34556678999999999999999875 443 3444445555555443 3311121111111 234568999999
Q ss_pred hhhhhhhhhcCCCcccchhhccccccCcceEEEecChh------------------------HHHHHHHhhhhccccccc
Q 007128 527 WTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS------------------------VVDFVKKYLRALNWEAVA 582 (617)
Q Consensus 527 ~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~------------------------~~~~~~~~~~~~~w~~~~ 582 (617)
..++++.... ....+|.++.|+|||||+++|.|..- ..+++++++++.+|+.+
T Consensus 275 ~~vlh~~~d~--~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~- 351 (369)
T 3gwz_A 275 KHVLHDWDDD--DVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVE- 351 (369)
T ss_dssp ESCGGGSCHH--HHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEE-
T ss_pred hhhhccCCHH--HHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEE-
Confidence 9999876522 12379999999999999999976421 14578899999999986
Q ss_pred ccccCCCCCCCCCCeEEEEEEec
Q 007128 583 TTADASSDSDKDGDEVVFIVQKK 605 (617)
Q Consensus 583 ~~~~~~~~~~~~~~~~~l~~~K~ 605 (617)
++.. . ......++.|+|.
T Consensus 352 ~~~~--~---~~~~~svie~~~a 369 (369)
T 3gwz_A 352 RSLP--C---GAGPVRIVEIRRA 369 (369)
T ss_dssp EEEE--C---SSSSEEEEEEEEC
T ss_pred EEEE--C---CCCCcEEEEEEeC
Confidence 4443 1 1345678888763
No 290
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.60 E-value=4.9e-09 Score=97.35 Aligned_cols=138 Identities=14% Similarity=0.083 Sum_probs=78.7
Q ss_pred hhHHHhhhcchhhHhhhcCC---ceEEEEeecCCCCCceEEEeec--ccccchhhhh--hhccc-CC-cchhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK---DVWVMSVVPEDGPNTLKLIYDR--GLIGSIHNWC--EAYST-YP-RTYDLLHAWTVF 530 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~~~~l~~~~~r--gl~~~~~~~~--e~~~~-~p-~tfDlvh~~~~~ 530 (617)
.+|||+|||+|.++..|++. +. .++.+|...+++. .+ -..+...+.. +.++. ++ ++||+|.++..+
T Consensus 24 ~~vLd~G~G~G~~~~~l~~~~~~~~---~v~~~D~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~ 98 (180)
T 1ej0_A 24 MTVVDLGAAPGGWSQYVVTQIGGKG---RIIACDLLPMDPI--VGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAP 98 (180)
T ss_dssp CEEEEESCTTCHHHHHHHHHHCTTC---EEEEEESSCCCCC--TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred CeEEEeCCCCCHHHHHHHHHhCCCC---eEEEEECcccccc--CcEEEEEcccccchhhhhhhccCCCCceeEEEECCCc
Confidence 37999999999999999876 24 3444443114332 11 0122222210 00110 23 899999987766
Q ss_pred hhhhhcCC-------CcccchhhccccccCcceEEEecChh-HHHHHHHhhhhcccccccccccCCCCCCCCCCeEEEEE
Q 007128 531 SDIEKRGC-------SGEDLLLEMDRILRPTGFVIIRDKQS-VVDFVKKYLRALNWEAVATTADASSDSDKDGDEVVFIV 602 (617)
Q Consensus 531 ~~~~~~~c-------~~~~~l~Em~RiLrPgG~~ii~~~~~-~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~~ 602 (617)
++...... ....+|.++.|+|||||.+++..... ...++.+.+.. .|+.+ .+..+ ........+.+++|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~-~~~~~~~~~~~~~~ 175 (180)
T 1ej0_A 99 NMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS-LFTKV-KVRKP-DSSRARSREVYIVA 175 (180)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHH-HEEEE-EEECC-TTSCTTCCEEEEEE
T ss_pred cccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHH-hhhhE-EeecC-CcccccCceEEEEE
Confidence 53220000 01578999999999999999976533 33445555544 37665 33322 22223557888888
Q ss_pred Eec
Q 007128 603 QKK 605 (617)
Q Consensus 603 ~K~ 605 (617)
++.
T Consensus 176 ~~~ 178 (180)
T 1ej0_A 176 TGR 178 (180)
T ss_dssp EEE
T ss_pred ccC
Confidence 763
No 291
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.60 E-value=1.6e-09 Score=114.57 Aligned_cols=138 Identities=14% Similarity=0.199 Sum_probs=89.5
Q ss_pred CccchhhHHHhhhcchhhHhhhcCC--ceEEEEeecCCCCCceEEEeec----ccccchhhhhhhcccCC-cchhhhhhh
Q 007128 455 QSNSLRNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDGPNTLKLIYDR----GLIGSIHNWCEAYSTYP-RTYDLLHAW 527 (617)
Q Consensus 455 ~~~~~r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~~~~l~~~~~r----gl~~~~~~~~e~~~~~p-~tfDlvh~~ 527 (617)
......+|||+|||+|.++..|+++ +.. ++.+|.+.+++.+.++ |+-..+.....++...| ..+|+|.+.
T Consensus 187 ~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~---~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~ 263 (359)
T 1x19_A 187 KLDGVKKMIDVGGGIGDISAAMLKHFPELD---STILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEADAVLFC 263 (359)
T ss_dssp CCTTCCEEEEESCTTCHHHHHHHHHCTTCE---EEEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCCSEEEEE
T ss_pred CCCCCCEEEEECCcccHHHHHHHHHCCCCe---EEEEecHHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCCCEEEEe
Confidence 3445568999999999999999875 443 3344445666666554 33111221122222222 334999999
Q ss_pred hhhhhhhhcCCCcccchhhccccccCcceEEEecCh----------------------------hHHHHHHHhhhhcccc
Q 007128 528 TVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ----------------------------SVVDFVKKYLRALNWE 579 (617)
Q Consensus 528 ~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~----------------------------~~~~~~~~~~~~~~w~ 579 (617)
.+++++... +...+|.++.|+|||||+++|.+.. -..+++++++++.+++
T Consensus 264 ~vlh~~~d~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~ 341 (359)
T 1x19_A 264 RILYSANEQ--LSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYK 341 (359)
T ss_dssp SCGGGSCHH--HHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCE
T ss_pred chhccCCHH--HHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCc
Confidence 999876521 2678999999999999999887721 1234577778888888
Q ss_pred cccccccCCCCCCCCCCeEEEEEEec
Q 007128 580 AVATTADASSDSDKDGDEVVFIVQKK 605 (617)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~l~~~K~ 605 (617)
.+ ++.. . . ...+++++|+
T Consensus 342 ~v-~~~~--~----~-~~~vi~a~kp 359 (359)
T 1x19_A 342 DV-TMVR--K----Y-DHLLVQAVKP 359 (359)
T ss_dssp EE-EEEE--E----T-TEEEEEEECC
T ss_pred eE-EEEe--c----C-CceEEEEeCC
Confidence 75 4443 1 1 4678888874
No 292
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.60 E-value=2.2e-09 Score=103.27 Aligned_cols=111 Identities=14% Similarity=0.185 Sum_probs=77.8
Q ss_pred hHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc-ccchhhhhhhcccCC-cchhhhhhhhhhhhh
Q 007128 461 NLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL-IGSIHNWCEAYSTYP-RTYDLLHAWTVFSDI 533 (617)
Q Consensus 461 ~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl-~~~~~~~~e~~~~~p-~tfDlvh~~~~~~~~ 533 (617)
+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.++ |+ +..+..-.+.++ ++ ++||+|.+. +.|+
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~--~~~~ 105 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGY---EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFD-IVADAWEGIVSI--FCHL 105 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTC---EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBS-CCTTTCSEEEEE--CCCC
T ss_pred CEEEECCCCCHhHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcC-CCcCCccEEEEE--hhcC
Confidence 799999999999999999876 6777774 5777766655 22 111111112222 33 899999984 3333
Q ss_pred hhcCCCcccchhhccccccCcceEEEecChh-----------------HHHHHHHhhhhcccccc
Q 007128 534 EKRGCSGEDLLLEMDRILRPTGFVIIRDKQS-----------------VVDFVKKYLRALNWEAV 581 (617)
Q Consensus 534 ~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~-----------------~~~~~~~~~~~~~w~~~ 581 (617)
. ..+...+|.++.|+|||||.+++.+... ..++++++++ +|+.+
T Consensus 106 ~--~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~ 166 (202)
T 2kw5_A 106 P--SSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWL 166 (202)
T ss_dssp C--HHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEE
T ss_pred C--HHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEE
Confidence 1 1256789999999999999999986321 4567888888 88875
No 293
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.60 E-value=2.7e-09 Score=112.85 Aligned_cols=91 Identities=13% Similarity=0.099 Sum_probs=69.8
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCcccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDW 291 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~ 291 (617)
.+|||||||+|.++..++++ .++++|+ +.++..++. ..++.+..+|+.. +++ +||+|+++.++++|
T Consensus 195 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~ 264 (358)
T 1zg3_A 195 ESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------NENLNFVGGDMFK-SIP--SADAVLLKWVLHDW 264 (358)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------CSSEEEEECCTTT-CCC--CCSEEEEESCGGGS
T ss_pred CEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------CCCcEEEeCccCC-CCC--CceEEEEcccccCC
Confidence 58999999999999998875 3677787 455554431 1236777788776 666 49999999987766
Q ss_pred ccccc--eEEEEecccccC---CceeeecCh
Q 007128 292 LQRDG--ILLLELDRLLRP---GGYFAYSSP 317 (617)
Q Consensus 292 ~~~~~--~~L~el~RvLrP---GG~lvis~p 317 (617)
.++ . .+|+++.++|+| ||++++..+
T Consensus 265 ~d~-~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 265 NDE-QSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp CHH-HHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred CHH-HHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 543 4 799999999999 999998643
No 294
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.59 E-value=7.5e-09 Score=102.70 Aligned_cols=97 Identities=19% Similarity=0.180 Sum_probs=73.1
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCC--CcccccccccccCCCCCcccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRLPYPSRSFELAHCSRCRIDW 291 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~ 291 (617)
.+|||+|||+|.++..+++. .|+++|+++.++..++... ...++ ++.+...|.....+++++||+|++..
T Consensus 93 ~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~----- 166 (248)
T 2yvl_A 93 KRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNL-KKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDV----- 166 (248)
T ss_dssp CEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHH-HHTTCCTTEEEECSCTTTSCCCTTCBSEEEECS-----
T ss_pred CEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHH-HHcCCCCcEEEEEcChhhcccCCCcccEEEECC-----
Confidence 68999999999999888764 6889999988777766433 33343 46677777766543667899998632
Q ss_pred ccccceEEEEecccccCCceeeecChhh
Q 007128 292 LQRDGILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 292 ~~~~~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
.++..++.++.++|+|||++++..+..
T Consensus 167 -~~~~~~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 167 -REPWHYLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp -SCGGGGHHHHHHHBCTTCEEEEEESSH
T ss_pred -cCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 233568999999999999999986543
No 295
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.59 E-value=9.3e-09 Score=109.65 Aligned_cols=123 Identities=12% Similarity=0.073 Sum_probs=85.6
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC-Ccccccccccc-cCC-CCCcccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKR-LPY-PSRSFELAHCSRC 287 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~-lpf-~~~sFDlV~~s~~ 287 (617)
+.+|||+| |+|.++..++.. .|+++|+++.++..++. .+.+.++ ++.+..+|+.. +|. .+++||+|+++..
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~-~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEK-AANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHH-HHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC
Confidence 36899999 999999888754 58999999988888774 4444565 67888889887 764 4578999998754
Q ss_pred ccccccccceEEEEecccccCCcee-eecChhhhcCCHHHHHHHHHHHHHHH-Hhhhhhh
Q 007128 288 RIDWLQRDGILLLELDRLLRPGGYF-AYSSPEAYAQDEEDLRIWKEMSALVE-RMCWRIA 345 (617)
Q Consensus 288 l~h~~~~~~~~L~el~RvLrPGG~l-vis~p~~~~~~~~~~~~w~~l~~l~~-~~gf~~v 345 (617)
. +... ...++.++.++|||||.+ +++... .... ...|..+.+.+. ..||...
T Consensus 251 ~-~~~~-~~~~l~~~~~~LkpgG~~~~~~~~~-~~~~---~~~~~~~~~~l~~~~g~~~~ 304 (373)
T 2qm3_A 251 E-TLEA-IRAFVGRGIATLKGPRCAGYFGITR-RESS---LDKWREIQKLLLNEFNVVIT 304 (373)
T ss_dssp S-SHHH-HHHHHHHHHHTBCSTTCEEEEEECT-TTCC---HHHHHHHHHHHHHTSCCEEE
T ss_pred C-chHH-HHHHHHHHHHHcccCCeEEEEEEec-CcCC---HHHHHHHHHHHHHhcCcchh
Confidence 2 2222 256889999999999944 444322 0111 123456667666 6776543
No 296
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.58 E-value=1.3e-09 Score=107.48 Aligned_cols=108 Identities=16% Similarity=0.170 Sum_probs=73.7
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc-ccc-hhhhhhhcccC-Ccchhhhhhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL-IGS-IHNWCEAYSTY-PRTYDLLHAWTVFSDIEK 535 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl-~~~-~~~~~e~~~~~-p~tfDlvh~~~~~~~~~~ 535 (617)
.+|||+|||+|.++..|++.+. .|+.+|. +.+++.+.++.- +.. ..++.+.++.- +++||+|++.
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~-------- 118 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQAA---RWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR-------- 118 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE--------
T ss_pred CeEEEeCCCCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC--------
Confidence 4699999999999999999876 5666664 677777776622 111 12332333322 3799999985
Q ss_pred cCCCcccchhhccccccCcceEEEecChhHHHHHHHhhhhccccc
Q 007128 536 RGCSGEDLLLEMDRILRPTGFVIIRDKQSVVDFVKKYLRALNWEA 580 (617)
Q Consensus 536 ~~c~~~~~l~Em~RiLrPgG~~ii~~~~~~~~~~~~~~~~~~w~~ 580 (617)
-++..+|.++.|+|||||.++........+++.+.+...+++.
T Consensus 119 --~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~ 161 (226)
T 3m33_A 119 --RGPTSVILRLPELAAPDAHFLYVGPRLNVPEVPERLAAVGWDI 161 (226)
T ss_dssp --SCCSGGGGGHHHHEEEEEEEEEEESSSCCTHHHHHHHHTTCEE
T ss_pred --CCHHHHHHHHHHHcCCCcEEEEeCCcCCHHHHHHHHHHCCCeE
Confidence 2678999999999999999994433323345555555555444
No 297
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.58 E-value=6.1e-09 Score=98.42 Aligned_cols=112 Identities=13% Similarity=0.142 Sum_probs=78.2
Q ss_pred hHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecccccchhhhhhhcccCCcchhhhhhhhhhhhhhhc---
Q 007128 461 NLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGLIGSIHNWCEAYSTYPRTYDLLHAWTVFSDIEKR--- 536 (617)
Q Consensus 461 ~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl~~~~~~~~e~~~~~p~tfDlvh~~~~~~~~~~~--- 536 (617)
+|||+|||+|.++..|++++ +|+.+|. +.|++. ...+--...+..++++. ++||+|.++..|.+....
T Consensus 26 ~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~--~~~~~~~~~d~~~~~~~--~~fD~i~~n~~~~~~~~~~~~ 97 (170)
T 3q87_B 26 IVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES--HRGGNLVRADLLCSINQ--ESVDVVVFNPPYVPDTDDPII 97 (170)
T ss_dssp EEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT--CSSSCEEECSTTTTBCG--GGCSEEEECCCCBTTCCCTTT
T ss_pred eEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc--ccCCeEEECChhhhccc--CCCCEEEECCCCccCCccccc
Confidence 69999999999999999987 6777774 566655 22221111222232222 899999998777643211
Q ss_pred --CCCcccchhhccccccCcceEEEecC-hhHHHHHHHhhhhcccccc
Q 007128 537 --GCSGEDLLLEMDRILRPTGFVIIRDK-QSVVDFVKKYLRALNWEAV 581 (617)
Q Consensus 537 --~c~~~~~l~Em~RiLrPgG~~ii~~~-~~~~~~~~~~~~~~~w~~~ 581 (617)
..+...++.++-+.| |||.+++... ....+++.++++..+|+.+
T Consensus 98 ~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~ 144 (170)
T 3q87_B 98 GGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTR 144 (170)
T ss_dssp BCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEE
T ss_pred cCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEE
Confidence 112356788888888 9999998764 4567789999999999985
No 298
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.58 E-value=6.1e-10 Score=107.61 Aligned_cols=97 Identities=11% Similarity=0.117 Sum_probs=67.2
Q ss_pred hhHHHhhhcchhh-HhhhcCCceEEEEeecCCC-CCceEEEeec----cc-ccchhhhhhhcccCC-cchhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSF-AAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL-IGSIHNWCEAYSTYP-RTYDLLHAWTVFS 531 (617)
Q Consensus 460 r~vLD~g~G~G~f-a~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl-~~~~~~~~e~~~~~p-~tfDlvh~~~~~~ 531 (617)
.+|||+|||+|.+ ...++..+. +|+.+|. +.+++.+.++ +. +-.++.-.+.++ ++ ++||+|.+..++.
T Consensus 25 ~~vLDiGcG~G~~~~~~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~ 100 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIFVEDGY---KTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLP-FKDESMSFVYSYGTIF 100 (209)
T ss_dssp SEEEEESCCSSSCTHHHHHHTTC---EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCC-SCTTCEEEEEECSCGG
T ss_pred CEEEEECCCCCHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCC-CCCCceeEEEEcChHH
Confidence 4799999999998 455566666 5666664 5777666554 21 111111112233 33 8999999999998
Q ss_pred hhhhcCCCcccchhhccccccCcceEEEecC
Q 007128 532 DIEKRGCSGEDLLLEMDRILRPTGFVIIRDK 562 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~ 562 (617)
|+. ..++..+|.++.|+|||||.+++.+.
T Consensus 101 ~~~--~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 101 HMR--KNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp GSC--HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hCC--HHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 872 11678999999999999999999764
No 299
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.57 E-value=1.9e-09 Score=114.22 Aligned_cols=142 Identities=16% Similarity=0.152 Sum_probs=91.0
Q ss_pred cchhhHHHhhhcchhhHhhhcCC--ceEEEEeecCCCCCceEEEeec----ccccchhhhhhhc-ccCCcchhhhhhhhh
Q 007128 457 NSLRNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDGPNTLKLIYDR----GLIGSIHNWCEAY-STYPRTYDLLHAWTV 529 (617)
Q Consensus 457 ~~~r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~~~~l~~~~~r----gl~~~~~~~~e~~-~~~p~tfDlvh~~~~ 529 (617)
..-.+|||+|||+|.++..|++. ++. ++.+|.+.+++.+.++ |+...+...+.++ ..+|..||+|.+..+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~---~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~v 257 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLR---GTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSFV 257 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCE---EEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCEEEEEEESC
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCE---EEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCCCCCEEEEecc
Confidence 34567999999999999999875 343 3344434566555443 3311122112222 224556999999999
Q ss_pred hhhhhhcCCCcccchhhccccccCcceEEEecC--h--h-----------------------HHHHHHHhhhhccccccc
Q 007128 530 FSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDK--Q--S-----------------------VVDFVKKYLRALNWEAVA 582 (617)
Q Consensus 530 ~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~--~--~-----------------------~~~~~~~~~~~~~w~~~~ 582 (617)
++|+... +...+|.++.|+|||||+++|.+. . + ..+++++++++.+|+.+
T Consensus 258 l~~~~~~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~- 334 (374)
T 1qzz_A 258 LLNWSDE--DALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALA- 334 (374)
T ss_dssp GGGSCHH--HHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEE-
T ss_pred ccCCCHH--HHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceE-
Confidence 9876522 224899999999999999999876 2 1 24567888999999886
Q ss_pred ccccCCCCCCC-CCCeEEEEEEecc
Q 007128 583 TTADASSDSDK-DGDEVVFIVQKKI 606 (617)
Q Consensus 583 ~~~~~~~~~~~-~~~~~~l~~~K~~ 606 (617)
++.+ .+... .....++.++|+=
T Consensus 335 ~~~~--~~~~~~~~~~~~i~~~~~~ 357 (374)
T 1qzz_A 335 SERT--SGSTTLPFDFSILEFTAVS 357 (374)
T ss_dssp EEEE--ECCSSCSSCEEEEEEEECC
T ss_pred EEEE--CCCCcccCCcEEEEEEECc
Confidence 4443 21100 0122788888853
No 300
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.57 E-value=6.5e-09 Score=108.92 Aligned_cols=96 Identities=17% Similarity=0.150 Sum_probs=68.7
Q ss_pred eEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHh-----------CCCccccccccccc--CCCCC
Q 007128 216 RTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALER-----------GIPAYLGVLGTKRL--PYPSR 277 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~r-----------g~~~~~~~~d~~~l--pf~~~ 277 (617)
.+|||+|||+|.++..|+.. .|+++|+++.++..++....... ..++.+..+|+... +++++
T Consensus 107 ~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~ 186 (336)
T 2b25_A 107 DTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSL 186 (336)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC------
T ss_pred CEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCCC
Confidence 68999999999999888764 48999999988877775443311 13567778888776 56677
Q ss_pred ccccccccccccccccccceEEEEecccccCCceeeecCh
Q 007128 278 SFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 278 sFDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p 317 (617)
+||+|++... .+..++.++.++|+|||++++..+
T Consensus 187 ~fD~V~~~~~------~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 187 TFDAVALDML------NPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp -EEEEEECSS------STTTTHHHHGGGEEEEEEEEEEES
T ss_pred CeeEEEECCC------CHHHHHHHHHHhcCCCcEEEEEeC
Confidence 8999997432 223478999999999999998654
No 301
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.57 E-value=4.9e-09 Score=104.50 Aligned_cols=118 Identities=12% Similarity=0.024 Sum_probs=86.6
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC--CcccccccccccCCCCCcccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRLPYPSRSFELAHCSRCRI 289 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~lpf~~~sFDlV~~s~~l~ 289 (617)
.+|||||||+|.++..|+.. .|+++|+++..+..|+. .+...++ .+.+..+|......+++.||+|+.....-
T Consensus 23 ~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~-N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmGg 101 (230)
T 3lec_A 23 ARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALK-NVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGMGG 101 (230)
T ss_dssp EEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHH-HHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECH
T ss_pred CEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCcEEEEECchhhccccccccCEEEEeCCch
Confidence 68999999999999998875 48999999998888874 4455555 36777888777666655799987554311
Q ss_pred ccccccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhhhhc
Q 007128 290 DWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRIAAK 347 (617)
Q Consensus 290 h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~v~~ 347 (617)
.. ...+|.+..+.|+++|+|+++... . ...+.+.+.+.||.++..
T Consensus 102 ~l---I~~IL~~~~~~l~~~~~lIlqp~~----~------~~~lr~~L~~~Gf~i~~E 146 (230)
T 3lec_A 102 RL---IADILNNDIDKLQHVKTLVLQPNN----R------EDDLRKWLAANDFEIVAE 146 (230)
T ss_dssp HH---HHHHHHHTGGGGTTCCEEEEEESS----C------HHHHHHHHHHTTEEEEEE
T ss_pred HH---HHHHHHHHHHHhCcCCEEEEECCC----C------hHHHHHHHHHCCCEEEEE
Confidence 11 123666778889999999997421 1 256788899999977653
No 302
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.57 E-value=1.7e-09 Score=107.72 Aligned_cols=97 Identities=18% Similarity=0.262 Sum_probs=65.9
Q ss_pred hhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc-ccchhhhhhhcccCCcchhhhhhh-hhhh
Q 007128 459 LRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL-IGSIHNWCEAYSTYPRTYDLLHAW-TVFS 531 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl-~~~~~~~~e~~~~~p~tfDlvh~~-~~~~ 531 (617)
-.+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.++ |+ +-.++.-.+.++ ++++||+|.|. ..+.
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~~~~ 117 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAERGY---EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA-FKNEFDAVTMFFSTIM 117 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC-CCSCEEEEEECSSGGG
T ss_pred CCEEEEeCCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcc-cCCCccEEEEcCCchh
Confidence 35799999999999999999877 5667774 5777776654 22 111111111222 34899999864 3344
Q ss_pred hhhhcCCCcccchhhccccccCcceEEEec
Q 007128 532 DIEKRGCSGEDLLLEMDRILRPTGFVIIRD 561 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~ 561 (617)
++. .-+...+|.++.|+|||||.+++..
T Consensus 118 ~~~--~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 118 YFD--EEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp GSC--HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCC--HHHHHHHHHHHHHHcCCCeEEEEec
Confidence 332 1156789999999999999999753
No 303
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.56 E-value=4.2e-09 Score=107.26 Aligned_cols=134 Identities=15% Similarity=0.242 Sum_probs=90.5
Q ss_pred hhHHHhhhcchhhHhhhcCC--ceEEEEeecCCC-CCceEEEeec----cc--ccchh-hhhhhcccCCcchhhhhhhh-
Q 007128 460 RNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDG-PNTLKLIYDR----GL--IGSIH-NWCEAYSTYPRTYDLLHAWT- 528 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~-~~~l~~~~~r----gl--~~~~~-~~~e~~~~~p~tfDlvh~~~- 528 (617)
.+|||+|||+|.++..|+.. +. +|+.+|. +.+++.+.++ |+ +-.++ ++.+.++ +++||+|.++-
T Consensus 111 ~~vLDlG~GsG~~~~~la~~~~~~---~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~fD~Iv~npP 185 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASERPDC---EIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA--GQQFAMIVSNPP 185 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTS---EEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT--TCCEEEEEECCC
T ss_pred CEEEEecCCccHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc--cCCccEEEECCC
Confidence 36999999999999999853 33 5667774 5777666554 32 11122 3333332 37899999862
Q ss_pred ------------hhhhhhh--------cCCCcccchhhccccccCcceEEEecChhHHHHHHHhhhhcccccccccccCC
Q 007128 529 ------------VFSDIEK--------RGCSGEDLLLEMDRILRPTGFVIIRDKQSVVDFVKKYLRALNWEAVATTADAS 588 (617)
Q Consensus 529 ------------~~~~~~~--------~~c~~~~~l~Em~RiLrPgG~~ii~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 588 (617)
+..|-+. .-.++..++.++.|+|||||++++.......++++++++..+|+.+ .+..
T Consensus 186 y~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~v-~~~~-- 262 (276)
T 2b3t_A 186 YIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDV-ETCR-- 262 (276)
T ss_dssp CBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHHHHHTTCTTC-CEEE--
T ss_pred CCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHHHHHCCCcEE-EEEe--
Confidence 2211100 0012357889999999999999999888888889999999999875 3332
Q ss_pred CCCCCCCCeEEEEEEe
Q 007128 589 SDSDKDGDEVVFIVQK 604 (617)
Q Consensus 589 ~~~~~~~~~~~l~~~K 604 (617)
+ -.+.+++++++|
T Consensus 263 d---~~g~~r~~~~~~ 275 (276)
T 2b3t_A 263 D---YGDNERVTLGRY 275 (276)
T ss_dssp C---TTSSEEEEEEEC
T ss_pred c---CCCCCcEEEEEE
Confidence 1 156788888875
No 304
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.56 E-value=7.1e-09 Score=107.68 Aligned_cols=101 Identities=11% Similarity=0.064 Sum_probs=71.3
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHH----hCCCcccccccccc-cCCCCCcccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALE----RGIPAYLGVLGTKR-LPYPSRSFELAHCS 285 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~----rg~~~~~~~~d~~~-lpf~~~sFDlV~~s 285 (617)
..+|||||||+|.++..++++ .|+++|+++.++..++..+..- ...++.+..+|+.. ++..+++||+|++.
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~d 175 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITD 175 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEEC
Confidence 368999999999999998865 4899999998887776443321 12356777777654 44556899999975
Q ss_pred ccccccccc----cceEEEEecccccCCceeeecC
Q 007128 286 RCRIDWLQR----DGILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 286 ~~l~h~~~~----~~~~L~el~RvLrPGG~lvis~ 316 (617)
.. .++... ...+++++.++|+|||++++..
T Consensus 176 ~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 176 SS-DPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp CC------------CHHHHHHHHHEEEEEEEEEEE
T ss_pred CC-CCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 43 222211 1347889999999999999864
No 305
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.56 E-value=1.5e-09 Score=104.25 Aligned_cols=139 Identities=12% Similarity=0.080 Sum_probs=86.3
Q ss_pred hHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CCceEEEeec----cc---ccchhhhhhhcccC-Ccchhhhhhhh
Q 007128 461 NLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PNTLKLIYDR----GL---IGSIHNWCEAYSTY-PRTYDLLHAWT 528 (617)
Q Consensus 461 ~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~~l~~~~~r----gl---~~~~~~~~e~~~~~-p~tfDlvh~~~ 528 (617)
+|||+|||+|.++..|+++ .. .|+.+|. +.+++.|.++ |+ +-.++.-.+.++.+ +++||+|.++.
T Consensus 25 ~vLDlGcG~G~~~~~l~~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 101 (197)
T 3eey_A 25 TVVDATCGNGNDTAFLASLVGENG---RVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNL 101 (197)
T ss_dssp EEEESCCTTSHHHHHHHHHHCTTC---EEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEE
T ss_pred EEEEcCCCCCHHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcC
Confidence 6999999999999999875 23 5777774 5777766655 22 22222112334323 48999999876
Q ss_pred hh-hhh----hhcCCCcccchhhccccccCcceEEEecCh------hHHHHHHHhhhhcc---cccccccccCCCCCCCC
Q 007128 529 VF-SDI----EKRGCSGEDLLLEMDRILRPTGFVIIRDKQ------SVVDFVKKYLRALN---WEAVATTADASSDSDKD 594 (617)
Q Consensus 529 ~~-~~~----~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~------~~~~~~~~~~~~~~---w~~~~~~~~~~~~~~~~ 594 (617)
.+ ++- ....-+...++.++.|+|||||++++.... ...+.+.+++..+. |+.+ ... .-+...
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~-~~~---~~~~~~ 177 (197)
T 3eey_A 102 GYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQ-RTD---FINQAN 177 (197)
T ss_dssp SBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEE-EEE---ETTCCS
T ss_pred CcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEE-EEE---eccCcc
Confidence 55 100 000002246999999999999999988532 14455666666554 7763 221 112234
Q ss_pred CCeEEEEEEecc
Q 007128 595 GDEVVFIVQKKI 606 (617)
Q Consensus 595 ~~~~~l~~~K~~ 606 (617)
.+..+++.+|..
T Consensus 178 ~pp~~~~~~~~~ 189 (197)
T 3eey_A 178 CPPILVCIEKIS 189 (197)
T ss_dssp CCCEEEEEEECC
T ss_pred CCCeEEEEEEcc
Confidence 567888888853
No 306
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.56 E-value=7.6e-09 Score=113.17 Aligned_cols=123 Identities=17% Similarity=0.217 Sum_probs=83.3
Q ss_pred eEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCC-CcccccccccccC--CCCCccccccc---
Q 007128 216 RTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRLP--YPSRSFELAHC--- 284 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~lp--f~~~sFDlV~~--- 284 (617)
.+|||+|||+|..+..|++. .|+++|+++..+..++. .+...++ ++.+..+|...++ +++++||+|++
T Consensus 261 ~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~-~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~P 339 (450)
T 2yxl_A 261 ETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKD-FVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLDAP 339 (450)
T ss_dssp CEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHH-HHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEECC
T ss_pred CEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHH-HHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEcCC
Confidence 68999999999998888762 58999999887776663 3444455 5778888887776 55578999995
Q ss_pred --ccccccccccc----------------ceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHh-hhhh
Q 007128 285 --SRCRIDWLQRD----------------GILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERM-CWRI 344 (617)
Q Consensus 285 --s~~l~h~~~~~----------------~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~-gf~~ 344 (617)
....++..++. ..+|.++.++|||||++++++....+...+ +.+..++++. +|+.
T Consensus 340 csg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene-----~~v~~~l~~~~~~~~ 413 (450)
T 2yxl_A 340 CTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENE-----KNIRWFLNVHPEFKL 413 (450)
T ss_dssp CCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTH-----HHHHHHHHHCSSCEE
T ss_pred CCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHH-----HHHHHHHHhCCCCEE
Confidence 22222211110 347899999999999999876544332221 3445555554 4543
No 307
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.56 E-value=3.5e-09 Score=110.52 Aligned_cols=100 Identities=12% Similarity=0.004 Sum_probs=68.7
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHH----hCCCcccccccccc-cCCCCCccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALE----RGIPAYLGVLGTKR-LPYPSRSFELAHCSR 286 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~----rg~~~~~~~~d~~~-lpf~~~sFDlV~~s~ 286 (617)
.+|||||||+|.++..+++. .|+++|+++.++..++..+... ...++.+..+|+.. ++..+++||+|++..
T Consensus 110 ~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d~ 189 (314)
T 2b2c_A 110 KRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITDS 189 (314)
T ss_dssp CEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEECC
T ss_pred CEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEcC
Confidence 68999999999999988765 5899999998777766433221 12346677777654 333567899999754
Q ss_pred ccccccccc----ceEEEEecccccCCceeeecC
Q 007128 287 CRIDWLQRD----GILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 287 ~l~h~~~~~----~~~L~el~RvLrPGG~lvis~ 316 (617)
. .++.... ..+++++.++|+|||++++..
T Consensus 190 ~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 190 S-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp C--------------HHHHHHHHEEEEEEEEEEC
T ss_pred C-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 2 3332211 357788999999999999975
No 308
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.56 E-value=1.8e-09 Score=102.05 Aligned_cols=110 Identities=17% Similarity=0.167 Sum_probs=78.1
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc---ccch-hhhhhhcccCCcchhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL---IGSI-HNWCEAYSTYPRTYDLLHAWTVF 530 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl---~~~~-~~~~e~~~~~p~tfDlvh~~~~~ 530 (617)
.+|||+|||+|.++..|++... .|+.+|. +.+++.+.++ |+ +-.+ .++.+.++.. .+||+|.+..++
T Consensus 35 ~~vldiG~G~G~~~~~l~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~~~ 110 (192)
T 1l3i_A 35 DVAVDVGCGTGGVTLELAGRVR---RVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI-PDIDIAVVGGSG 110 (192)
T ss_dssp CEEEEESCTTSHHHHHHHTTSS---EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS-CCEEEEEESCCT
T ss_pred CEEEEECCCCCHHHHHHHHhcC---EEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC-CCCCEEEECCch
Confidence 4799999999999999998874 5666664 5666655543 22 1111 1222222221 589999987776
Q ss_pred hhhhhcCCCcccchhhccccccCcceEEEecC-hhHHHHHHHhhhhccccc
Q 007128 531 SDIEKRGCSGEDLLLEMDRILRPTGFVIIRDK-QSVVDFVKKYLRALNWEA 580 (617)
Q Consensus 531 ~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~-~~~~~~~~~~~~~~~w~~ 580 (617)
. ++..++.++.|+|+|||.+++.+. .....++.+++...+|+.
T Consensus 111 ~-------~~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~ 154 (192)
T 1l3i_A 111 G-------ELQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGFDV 154 (192)
T ss_dssp T-------CHHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCC
T ss_pred H-------HHHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCCce
Confidence 5 457899999999999999999765 456777888888888854
No 309
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.55 E-value=2e-09 Score=104.00 Aligned_cols=130 Identities=11% Similarity=0.120 Sum_probs=84.2
Q ss_pred hhHHHhhhcchhhHhhhcCC--ceEEEEeecCCC-CCceEEEeec----ccccchhhhhhhcccC--Ccchhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWCEAYSTY--PRTYDLLHAWTVF 530 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~e~~~~~--p~tfDlvh~~~~~ 530 (617)
.+|||+|||+|.++..|+.. +. +|+.+|. +.+++.+.++ |+- .++..+.++..+ +.+||+|.++.+
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~D~i~~~~~- 141 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVRPEA---HFTLLDSLGKRVRFLRQVQHELKLE-NIEPVQSRVEEFPSEPPFDGVISRAF- 141 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHTTCS-SEEEEECCTTTSCCCSCEEEEECSCS-
T ss_pred CeEEEECCCCCHHHHHHHHHCCCC---EEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEecchhhCCccCCcCEEEEecc-
Confidence 36999999999999999864 44 4556663 4666555443 331 122122222222 279999998542
Q ss_pred hhhhhcCCCcccchhhccccccCcceEEEecChhHHHHHHHhhhhcccccccccccCCCCCCCCCCeEEEEEEec
Q 007128 531 SDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQSVVDFVKKYLRALNWEAVATTADASSDSDKDGDEVVFIVQKK 605 (617)
Q Consensus 531 ~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~~~K~ 605 (617)
.++..++.++.++|||||++++.......++++.+++ +|+.+ .+..-.. +.......+++++|+
T Consensus 142 -------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~--g~~~~-~~~~~~~-~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 142 -------ASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPE--EYQVE-SVVKLQV-PALDGERHLVVIKAN 205 (207)
T ss_dssp -------SSHHHHHHHHTTSEEEEEEEEEEESSCCHHHHHTSCT--TEEEE-EEEEEEC-C--CCEEEEEEEEEC
T ss_pred -------CCHHHHHHHHHHhcCCCcEEEEEeCCCchHHHHHHhc--CCcee-eeeeecc-CCCCCceEEEEEEec
Confidence 2567899999999999999999987777778888887 77764 3210001 112445677777764
No 310
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.55 E-value=6.1e-09 Score=104.67 Aligned_cols=117 Identities=10% Similarity=0.028 Sum_probs=85.4
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCCC--cccccccccccCCCCCcccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGIP--AYLGVLGTKRLPYPSRSFELAHCSRCRI 289 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~~--~~~~~~d~~~lpf~~~sFDlV~~s~~l~ 289 (617)
.+|||||||+|.++..|+.. .|+++|+++..+..|+ +.+...++. +.+..+|......++..||+|++....-
T Consensus 23 ~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~-~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmGg 101 (244)
T 3gnl_A 23 ERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQ-KQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMGG 101 (244)
T ss_dssp EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHH-HHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECH
T ss_pred CEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHH-HHHHHcCCCceEEEEecchhhccCccccccEEEEeCCch
Confidence 68999999999999998875 4899999998888887 445555653 6777788776655544699987654311
Q ss_pred ccccccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhhhh
Q 007128 290 DWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRIAA 346 (617)
Q Consensus 290 h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~v~ 346 (617)
.. ...+|.+..+.|+++|+|+++... . ...+.+.+.+.||.++.
T Consensus 102 ~l---I~~IL~~~~~~L~~~~~lIlq~~~----~------~~~lr~~L~~~Gf~i~~ 145 (244)
T 3gnl_A 102 TL---IRTILEEGAAKLAGVTKLILQPNI----A------AWQLREWSEQNNWLITS 145 (244)
T ss_dssp HH---HHHHHHHTGGGGTTCCEEEEEESS----C------HHHHHHHHHHHTEEEEE
T ss_pred HH---HHHHHHHHHHHhCCCCEEEEEcCC----C------hHHHHHHHHHCCCEEEE
Confidence 11 123677778899999999997421 1 25678889999997654
No 311
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.55 E-value=3.7e-09 Score=104.56 Aligned_cols=97 Identities=10% Similarity=0.170 Sum_probs=71.9
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC--Cccccccccccc-CCC--CCccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRL-PYP--SRSFELAHCSR 286 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~l-pf~--~~sFDlV~~s~ 286 (617)
.+|||+|||+|.++..|++. .|+++|+++.++..++.. ....++ .+.+..+|.... +.. +++||+|++..
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 134 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKH-VKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDA 134 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHH-HHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEG
T ss_pred CEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECC
Confidence 58999999999998888764 589999998877776633 333344 366777776653 433 57899999765
Q ss_pred cccccccccceEEEEecccccCCceeeecCh
Q 007128 287 CRIDWLQRDGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 287 ~l~h~~~~~~~~L~el~RvLrPGG~lvis~p 317 (617)
.. .+...++.++.++|+|||++++.+.
T Consensus 135 ~~----~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 135 AK----GQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp GG----SCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred CH----HHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 42 2335688999999999999999743
No 312
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.54 E-value=3.5e-09 Score=104.15 Aligned_cols=136 Identities=13% Similarity=0.086 Sum_probs=86.2
Q ss_pred hhHHHhhhc-chhhHhhhcCC-ceEEEEeecCCC-CCceEEEeec----cc-ccchh-hhhhhcccCC-cchhhhhhhhh
Q 007128 460 RNLMDMKAH-LGSFAAALKEK-DVWVMSVVPEDG-PNTLKLIYDR----GL-IGSIH-NWCEAYSTYP-RTYDLLHAWTV 529 (617)
Q Consensus 460 r~vLD~g~G-~G~fa~~L~~~-~~~v~~v~~~~~-~~~l~~~~~r----gl-~~~~~-~~~e~~~~~p-~tfDlvh~~~~ 529 (617)
.+|||+||| +|.++..|++. +. +|+.+|. +.+++.|.++ |+ +-.++ ++ ..+..++ ++||+|.++-.
T Consensus 57 ~~vLDlG~G~~G~~~~~la~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~-~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 57 EVALEIGTGHTAMMALMAEKFFNC---KVTATEVDEEFFEYARRNIERNNSNVRLVKSNG-GIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp CEEEEECCTTTCHHHHHHHHHHCC---EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSS-CSSTTTCCSCEEEEEECCC
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCc-hhhhhcccCceeEEEECCC
Confidence 469999999 99999999987 44 5666674 5676666544 32 11121 11 1233344 89999998755
Q ss_pred hhhhhh---------------cCCCcccchhhccccccCcceEEEec--ChhHHHHHHHhhhhcccccccccccCCCCCC
Q 007128 530 FSDIEK---------------RGCSGEDLLLEMDRILRPTGFVIIRD--KQSVVDFVKKYLRALNWEAVATTADASSDSD 592 (617)
Q Consensus 530 ~~~~~~---------------~~c~~~~~l~Em~RiLrPgG~~ii~~--~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 592 (617)
|.+... ....+..++.++.|+|||||++++.. .....+++.+.++..+|+. .... ...+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~--~~~~--~~~g 208 (230)
T 3evz_A 133 YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSV--KDIK--FKVG 208 (230)
T ss_dssp CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEE--EEEE--ECCC
T ss_pred CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCce--EEEE--ecCC
Confidence 542211 00013678999999999999998843 3456778999999999976 3332 1111
Q ss_pred CCCCeEEEEEEe
Q 007128 593 KDGDEVVFIVQK 604 (617)
Q Consensus 593 ~~~~~~~l~~~K 604 (617)
...-.+|..+|
T Consensus 209 -~~~~~~l~f~~ 219 (230)
T 3evz_A 209 -TRWRHSLIFFK 219 (230)
T ss_dssp -C-CEEEEEEEC
T ss_pred -CeEEEEEEEec
Confidence 23455666555
No 313
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.54 E-value=6.2e-10 Score=110.65 Aligned_cols=99 Identities=15% Similarity=0.017 Sum_probs=68.9
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecccccchhhhhhhcc------cCC--cchhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGLIGSIHNWCEAYS------TYP--RTYDLLHAWTVF 530 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl~~~~~~~~e~~~------~~p--~tfDlvh~~~~~ 530 (617)
.+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.++.-...+...+.++. .++ ..||+|.+..++
T Consensus 58 ~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~ 134 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGF 134 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSS
T ss_pred CeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcchh
Confidence 4699999999999999998765 5666664 577766655531111111111111 122 349999999999
Q ss_pred hhhhhcCCCcccchhhccccccCcceEEEecCh
Q 007128 531 SDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 531 ~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
.|+.. .+...+|.++.|+|||||+++|.+..
T Consensus 135 ~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 135 HHIPV--EKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp TTSCG--GGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred hcCCH--HHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 97742 25679999999999999998888653
No 314
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.54 E-value=7.1e-09 Score=110.68 Aligned_cols=97 Identities=15% Similarity=0.177 Sum_probs=70.2
Q ss_pred eEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCCC--cccccccccccCCCCCcccccccccc--c
Q 007128 216 RTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGIP--AYLGVLGTKRLPYPSRSFELAHCSRC--R 288 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~~--~~~~~~d~~~lpf~~~sFDlV~~s~~--l 288 (617)
++|||||||+|.++...+++ .|+++|.++ ++..|+ +.++.+++. +.+..++++.+.++ +.||+|+|-.. .
T Consensus 85 k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~-~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~~ 161 (376)
T 4hc4_A 85 KTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAR-EVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGYG 161 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHH-HHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBTT
T ss_pred CEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHH-HHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeeccccc
Confidence 58999999999888776664 499999986 555554 556666653 67778888888877 68999997321 1
Q ss_pred cccccccceEEEEecccccCCceeeec
Q 007128 289 IDWLQRDGILLLELDRLLRPGGYFAYS 315 (617)
Q Consensus 289 ~h~~~~~~~~L~el~RvLrPGG~lvis 315 (617)
+.+......++....|+|+|||.++-+
T Consensus 162 l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 162 LLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp BTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred ccccchhhhHHHHHHhhCCCCceECCc
Confidence 122222234667778999999999865
No 315
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.54 E-value=9.6e-09 Score=98.71 Aligned_cols=136 Identities=15% Similarity=0.173 Sum_probs=72.5
Q ss_pred hhHHHhhhcchhhHhhhcCC----ceEEEEeecCCCCCceEEEeeccc---ccchhhhh-------------------hh
Q 007128 460 RNLMDMKAHLGSFAAALKEK----DVWVMSVVPEDGPNTLKLIYDRGL---IGSIHNWC-------------------EA 513 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~----~~~v~~v~~~~~~~~l~~~~~rgl---~~~~~~~~-------------------e~ 513 (617)
.+|||+|||+|+++..|+++ +.. |+.+|...+.. ..++ .+...+.. ..
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~~---v~gvD~s~~~~---~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~ 97 (201)
T 2plw_A 24 KIILDIGCYPGSWCQVILERTKNYKNK---IIGIDKKIMDP---IPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYK 97 (201)
T ss_dssp EEEEEESCTTCHHHHHHHHHTTTSCEE---EEEEESSCCCC---CTTCEEEECCTTTTSSCCC-----------CHHHHH
T ss_pred CEEEEeCCCCCHHHHHHHHHcCCCCce---EEEEeCCccCC---CCCceEEEccccchhhhhhccccccccccchhhHHH
Confidence 46999999999999999875 343 44444322211 0111 11221110 00
Q ss_pred cc-cCC-cchhhhhhhhhhhhh----hhcC---CCcccchhhccccccCcceEEEecCh-hHHHHHHHhhhhcccccccc
Q 007128 514 YS-TYP-RTYDLLHAWTVFSDI----EKRG---CSGEDLLLEMDRILRPTGFVIIRDKQ-SVVDFVKKYLRALNWEAVAT 583 (617)
Q Consensus 514 ~~-~~p-~tfDlvh~~~~~~~~----~~~~---c~~~~~l~Em~RiLrPgG~~ii~~~~-~~~~~~~~~~~~~~w~~~~~ 583 (617)
+. .++ ++||+|.++..+++. ..+. -....+|.++.|+|||||.+++.... ....++...+.. .|..+ .
T Consensus 98 ~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~-~f~~v-~ 175 (201)
T 2plw_A 98 LKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKG-MFQLV-H 175 (201)
T ss_dssp HHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHT-TEEEE-E
T ss_pred HHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHH-HHheE-E
Confidence 00 133 799999987654421 0000 00124889999999999999985433 223445555544 35443 2
Q ss_pred cccCCCCCCCCCCeEEEEEEe
Q 007128 584 TADASSDSDKDGDEVVFIVQK 604 (617)
Q Consensus 584 ~~~~~~~~~~~~~~~~l~~~K 604 (617)
+..+ ........|.+++|++
T Consensus 176 ~~~~-~~~r~~s~e~y~v~~~ 195 (201)
T 2plw_A 176 TTKP-KASRNESREIYLVCKN 195 (201)
T ss_dssp ECCC-C-----CCEEEEEEEE
T ss_pred EECC-cccCCcCceEEEEEec
Confidence 3221 1122356788999987
No 316
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.54 E-value=3e-09 Score=104.30 Aligned_cols=98 Identities=12% Similarity=0.077 Sum_probs=70.9
Q ss_pred eEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCC--Cccccccccccc-C-CC---CCcccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRL-P-YP---SRSFELAH 283 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~l-p-f~---~~sFDlV~ 283 (617)
.+|||||||+|.++..|++. .|+++|+++.++..++.. ....++ .+.+..+|+... + ++ .++||+|+
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~ 138 (223)
T 3duw_A 60 RNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSN-IERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIF 138 (223)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEE
T ss_pred CEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEE
Confidence 58999999999999888764 589999999888777643 333444 367777776442 2 11 25799999
Q ss_pred ccccccccccccceEEEEecccccCCceeeecChh
Q 007128 284 CSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 284 ~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
+... ......++.++.++|||||++++....
T Consensus 139 ~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 139 IDAD----KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp ECSC----GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred EcCC----cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 7643 122245889999999999999986543
No 317
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.53 E-value=4.8e-09 Score=107.75 Aligned_cols=103 Identities=12% Similarity=0.124 Sum_probs=71.7
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHH----hCCCccccccccccc-CCCCCcccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALE----RGIPAYLGVLGTKRL-PYPSRSFELAHCS 285 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~----rg~~~~~~~~d~~~l-pf~~~sFDlV~~s 285 (617)
+.+|||||||+|.++..+++. .|+++|+++.++..++..+... ...++.+..+|+... +..+++||+|++.
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d 158 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVD 158 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEE
T ss_pred CCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEEc
Confidence 468999999999999988764 5889999887776665332211 123466777776542 3335789999975
Q ss_pred cccccccccc----ceEEEEecccccCCceeeecChh
Q 007128 286 RCRIDWLQRD----GILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 286 ~~l~h~~~~~----~~~L~el~RvLrPGG~lvis~p~ 318 (617)
.. .++.... ..+++++.++|+|||++++....
T Consensus 159 ~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 159 SS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp CC-CTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred CC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 32 2322211 36889999999999999997543
No 318
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.53 E-value=3.8e-09 Score=109.86 Aligned_cols=98 Identities=16% Similarity=0.168 Sum_probs=65.3
Q ss_pred eeEEEeecccccccccccccc-hhhhhcc----CCCccchhhhHHHHHhC-CCcccccc-cccccCCCCCcccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS-DVITMSL----APNDVHQNQIQFALERG-IPAYLGVL-GTKRLPYPSRSFELAHCSRC 287 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~-~V~gvDi----s~~dl~~a~~~~a~~rg-~~~~~~~~-d~~~lpf~~~sFDlV~~s~~ 287 (617)
+.+|||||||+|.++..++++ .|+++|+ ++.++..... ...+ ..+.+..+ |+..+| .++||+|+|..+
T Consensus 83 g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~D~~~l~--~~~fD~V~sd~~ 157 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIPM---STYGWNLVRLQSGVDVFFIP--PERCDTLLCDIG 157 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCC---CSTTGGGEEEECSCCTTTSC--CCCCSEEEECCC
T ss_pred CCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHHh---hhcCCCCeEEEeccccccCC--cCCCCEEEECCc
Confidence 379999999999999999876 5899998 4433322111 1111 23556666 666654 468999998654
Q ss_pred cc--ccccccc---eEEEEecccccCCceeeecCh
Q 007128 288 RI--DWLQRDG---ILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 288 l~--h~~~~~~---~~L~el~RvLrPGG~lvis~p 317 (617)
.. ++..+.. .+|.++.++|||||.|++..+
T Consensus 158 ~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 158 ESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred cccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 31 2222211 368888999999999998643
No 319
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.53 E-value=6.1e-09 Score=107.70 Aligned_cols=101 Identities=11% Similarity=0.034 Sum_probs=70.5
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHH--H--hCCCcccccccccc-cCCCCCccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFAL--E--RGIPAYLGVLGTKR-LPYPSRSFELAHCSR 286 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~--~--rg~~~~~~~~d~~~-lpf~~~sFDlV~~s~ 286 (617)
.+|||||||+|.++..++++ .|+++|+++.++..++..+.. . ...++.+..+|+.. ++..+++||+|++..
T Consensus 92 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~ 171 (296)
T 1inl_A 92 KKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIIDS 171 (296)
T ss_dssp CEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEEC
T ss_pred CEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEcC
Confidence 68999999999999988865 589999999888777644322 1 12356777777654 344467899999753
Q ss_pred cccccccc-----cceEEEEecccccCCceeeecCh
Q 007128 287 CRIDWLQR-----DGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 287 ~l~h~~~~-----~~~~L~el~RvLrPGG~lvis~p 317 (617)
. .++... ...+++++.++|+|||++++...
T Consensus 172 ~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 172 T-DPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp -----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred C-CcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 2 221111 13577899999999999999753
No 320
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.52 E-value=3.3e-09 Score=103.99 Aligned_cols=97 Identities=16% Similarity=0.136 Sum_probs=70.7
Q ss_pred eEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCCC--ccccccccccc-CC-CC----Cccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGIP--AYLGVLGTKRL-PY-PS----RSFELA 282 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~~--~~~~~~d~~~l-pf-~~----~sFDlV 282 (617)
.+|||||||+|.++..|++. .|+++|+++.++..++.. ....++. +.+..+|+... +. .. ++||+|
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v 144 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEY-WEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLI 144 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEE
T ss_pred CEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHH-HHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEE
Confidence 58999999999999888764 589999999888777743 3344443 67777776432 21 11 789999
Q ss_pred cccccccccccccceEEEEecccccCCceeeecCh
Q 007128 283 HCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 283 ~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p 317 (617)
++... ......++.++.++|||||++++...
T Consensus 145 ~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 145 YIDAD----KANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp EECSC----GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EECCC----HHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 85432 23334588999999999999998643
No 321
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.52 E-value=3.6e-09 Score=102.15 Aligned_cols=130 Identities=13% Similarity=0.144 Sum_probs=91.4
Q ss_pred hhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecc----cccch--hhhhhhcccCCcchhhhhhhhhhh
Q 007128 459 LRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRG----LIGSI--HNWCEAYSTYPRTYDLLHAWTVFS 531 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rg----l~~~~--~~~~e~~~~~p~tfDlvh~~~~~~ 531 (617)
-.+|||+|||+|.+|..++...--+ .|..+|. +.|++++.++- +-..+ .+..+. ..|.+||+|.+..+++
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a-~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~--~~~~~~DvVLa~k~LH 126 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKI-IYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD--VYKGTYDVVFLLKMLP 126 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCC-EEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH--HTTSEEEEEEEETCHH
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc--CCCCCcChhhHhhHHH
Confidence 4479999999999999997662222 6888884 79999888763 21112 122222 2348999999999999
Q ss_pred hhhhcCCCcccchhhccccccCcceEEEecChh-----------HHHHHHHhhhhcccccccccccCCCCCCCCCCeEEE
Q 007128 532 DIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS-----------VVDFVKKYLRALNWEAVATTADASSDSDKDGDEVVF 600 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~-----------~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l 600 (617)
++. +...++..+.+.|||||.||-.++.+ ..+..+..+..=.|.+ .... .+.|.+.
T Consensus 127 lL~----~~~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~~~~~--~~~~-------~~nEl~y 193 (200)
T 3fzg_A 127 VLK----QQDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKIL--DSKV-------IGNELVY 193 (200)
T ss_dssp HHH----HTTCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTTSCEE--EEEE-------ETTEEEE
T ss_pred hhh----hhHHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCcceee--eeee-------eCceEEE
Confidence 996 55778889999999999999999443 4445666666556655 2222 3467777
Q ss_pred EEEe
Q 007128 601 IVQK 604 (617)
Q Consensus 601 ~~~K 604 (617)
+.+|
T Consensus 194 ~~~~ 197 (200)
T 3fzg_A 194 ITSG 197 (200)
T ss_dssp EECC
T ss_pred EEec
Confidence 7766
No 322
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.51 E-value=5.2e-09 Score=114.63 Aligned_cols=125 Identities=18% Similarity=0.169 Sum_probs=84.2
Q ss_pred eeEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCCCcccccccccccC-CCCCccccccc----
Q 007128 215 LRTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLP-YPSRSFELAHC---- 284 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lp-f~~~sFDlV~~---- 284 (617)
+.+|||+|||+|..+..|++. .|+++|+++.++..++ +.+...|+.+.+..+|...++ +.+++||+|++
T Consensus 102 g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~-~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~Pc 180 (464)
T 3m6w_A 102 GERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLL-ENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAPC 180 (464)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHH-HHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEECCC
T ss_pred CCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HHHHHcCCeEEEEECCHHHhhhhccccCCEEEECCCc
Confidence 368999999999999888753 4899999998887776 444555666777778877765 34678999994
Q ss_pred cc-ccccccccc----------------ceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHh-hhhhh
Q 007128 285 SR-CRIDWLQRD----------------GILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERM-CWRIA 345 (617)
Q Consensus 285 s~-~l~h~~~~~----------------~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~-gf~~v 345 (617)
+. ..+...++. ..+|.++.++|||||+|++++-...+...+ +.+..++++. +|+++
T Consensus 181 Sg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne-----~vv~~~l~~~~~~~l~ 254 (464)
T 3m6w_A 181 SGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENE-----GVVAHFLKAHPEFRLE 254 (464)
T ss_dssp CCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTH-----HHHHHHHHHCTTEEEE
T ss_pred CCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCH-----HHHHHHHHHCCCcEEE
Confidence 21 111111111 347888999999999999975444332222 3455566654 45443
No 323
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.51 E-value=2.7e-08 Score=102.28 Aligned_cols=111 Identities=18% Similarity=0.147 Sum_probs=74.5
Q ss_pred hHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhC--CCccccccc
Q 007128 193 KYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERG--IPAYLGVLG 268 (617)
Q Consensus 193 ~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg--~~~~~~~~d 268 (617)
...+.+.+.+.. .. ..+|||||||+|.++..|++. .|+++|+++.++..++... ...+ .++.+..+|
T Consensus 15 ~i~~~i~~~~~~------~~--~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~v~~~~~D 85 (285)
T 1zq9_A 15 LIINSIIDKAAL------RP--TDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRV-QGTPVASKLQVLVGD 85 (285)
T ss_dssp HHHHHHHHHTCC------CT--TCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHH-TTSTTGGGEEEEESC
T ss_pred HHHHHHHHhcCC------CC--CCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHH-HhcCCCCceEEEEcc
Confidence 445666666654 32 368999999999999999875 5899999998877666333 2222 246788888
Q ss_pred ccccCCCCCcccccccccc----------ccccccccceEE----EEe--cccccCCceeee
Q 007128 269 TKRLPYPSRSFELAHCSRC----------RIDWLQRDGILL----LEL--DRLLRPGGYFAY 314 (617)
Q Consensus 269 ~~~lpf~~~sFDlV~~s~~----------l~h~~~~~~~~L----~el--~RvLrPGG~lvi 314 (617)
+..++++ +||+|+++.. ++++......++ +|+ .++|+|||.++.
T Consensus 86 ~~~~~~~--~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y~ 145 (285)
T 1zq9_A 86 VLKTDLP--FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYC 145 (285)
T ss_dssp TTTSCCC--CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTCS
T ss_pred eecccch--hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCcccc
Confidence 8887776 7999998632 111122223333 233 369999999854
No 324
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.51 E-value=1e-08 Score=109.46 Aligned_cols=117 Identities=16% Similarity=0.089 Sum_probs=82.8
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCC--CcccccccccccCCCCCcccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRLPYPSRSFELAHCSRCRI 289 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~lpf~~~sFDlV~~s~~l~ 289 (617)
.+|||+|||+|.++..++.. .|+|+|+++.++..++ +.+...++ ++.+.++|+..+++++++||+|+|+....
T Consensus 219 ~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~-~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPyg 297 (373)
T 3tm4_A 219 GSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAE-MNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPYG 297 (373)
T ss_dssp CCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHH-HHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCCC
T ss_pred CEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHH-HHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCCCC
Confidence 68999999999998888764 5899999999988887 44555566 67888999999998888999999864311
Q ss_pred cccc------c-cceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhhhh
Q 007128 290 DWLQ------R-DGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRIAA 346 (617)
Q Consensus 290 h~~~------~-~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~v~ 346 (617)
.... . ...++.++.|+| +|+.++++. . .+.+++.+.+.||+...
T Consensus 298 ~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i~~-~-----------~~~~~~~~~~~G~~~~~ 348 (373)
T 3tm4_A 298 LKIGKKSMIPDLYMKFFNELAKVL-EKRGVFITT-E-----------KKAIEEAIAENGFEIIH 348 (373)
T ss_dssp ------CCHHHHHHHHHHHHHHHE-EEEEEEEES-C-----------HHHHHHHHHHTTEEEEE
T ss_pred cccCcchhHHHHHHHHHHHHHHHc-CCeEEEEEC-C-----------HHHHHHHHHHcCCEEEE
Confidence 1111 1 134778888988 444444432 1 13456677888986543
No 325
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.51 E-value=7.3e-09 Score=106.01 Aligned_cols=102 Identities=10% Similarity=0.045 Sum_probs=73.3
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHH----hCCCcccccccccc-cCCCCCcccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALE----RGIPAYLGVLGTKR-LPYPSRSFELAHCS 285 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~----rg~~~~~~~~d~~~-lpf~~~sFDlV~~s 285 (617)
..+|||||||+|.++..++++ .|+++|+++.+++.++..+..- ...++.+..+|+.. ++..+++||+|++.
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d 155 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVD 155 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEES
T ss_pred CCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEEC
Confidence 368999999999999988765 4899999998887776443221 12346777777654 44446789999975
Q ss_pred ccccccccc----cceEEEEecccccCCceeeecCh
Q 007128 286 RCRIDWLQR----DGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 286 ~~l~h~~~~----~~~~L~el~RvLrPGG~lvis~p 317 (617)
.. .++... ...+++++.++|+|||++++...
T Consensus 156 ~~-~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 156 ST-EPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp CS-SCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred CC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 43 232211 13588899999999999999753
No 326
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.51 E-value=3.2e-09 Score=110.55 Aligned_cols=137 Identities=18% Similarity=0.216 Sum_probs=91.2
Q ss_pred cchhhHHHhhhcchhhHhhhcCC--ceEEEEeecCCCCCceEEEeec----ccccchhhhhhhcc--cCCcchhhhhhhh
Q 007128 457 NSLRNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDGPNTLKLIYDR----GLIGSIHNWCEAYS--TYPRTYDLLHAWT 528 (617)
Q Consensus 457 ~~~r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~~~~l~~~~~r----gl~~~~~~~~e~~~--~~p~tfDlvh~~~ 528 (617)
..-.+|||+|||+|.++..|+++ +. .++.+|.+.+++.+.++ |+-..+...+.++. .+|..||+|.+..
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~ 240 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNA---EIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLVLLPN 240 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTC---EEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCEEEEEEES
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCC---eEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCCCCCCCcEEEEcc
Confidence 34457999999999999999876 44 45555533566555544 32111211112221 2455699999999
Q ss_pred hhhhhhhcCCCcccchhhccccccCcceEEEecChh---------------------------HHHHHHHhhhhcccccc
Q 007128 529 VFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS---------------------------VVDFVKKYLRALNWEAV 581 (617)
Q Consensus 529 ~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~---------------------------~~~~~~~~~~~~~w~~~ 581 (617)
+++|+... +...+|.++.|+|||||+++|.+... ..+++++++++.+++.+
T Consensus 241 ~l~~~~~~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~ 318 (335)
T 2r3s_A 241 FLHHFDVA--TCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHS 318 (335)
T ss_dssp CGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEE
T ss_pred hhccCCHH--HHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCee
Confidence 99977322 44689999999999999999876431 15678889999999986
Q ss_pred cccccCCCCCCCCCCeEEEEEEec
Q 007128 582 ATTADASSDSDKDGDEVVFIVQKK 605 (617)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~l~~~K~ 605 (617)
++.+ . .....+++++++
T Consensus 319 -~~~~--~----~~~~~~i~~~~~ 335 (335)
T 2r3s_A 319 -QLHS--L----PTTQQQVIVAYK 335 (335)
T ss_dssp -EEEC--C----TTSSSEEEEEEC
T ss_pred -eEEE--C----CCCceeEEEecC
Confidence 5543 2 123467777654
No 327
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.51 E-value=5.7e-09 Score=97.96 Aligned_cols=106 Identities=7% Similarity=0.061 Sum_probs=77.4
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc--ccch-hhhhhhcccCCcchhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL--IGSI-HNWCEAYSTYPRTYDLLHAWTVFS 531 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl--~~~~-~~~~e~~~~~p~tfDlvh~~~~~~ 531 (617)
.+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.++ |+ +-.+ .++.+.++. .+||+|.++.+
T Consensus 37 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~--~~~D~i~~~~~-- 109 (183)
T 2yxd_A 37 DVVVDVGCGSGGMTVEIAKRCK---FVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDK--LEFNKAFIGGT-- 109 (183)
T ss_dssp CEEEEESCCCSHHHHHHHTTSS---EEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGG--CCCSEEEECSC--
T ss_pred CEEEEeCCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccC--CCCcEEEECCc--
Confidence 3799999999999999998655 5566663 5666666554 22 1111 233333332 79999998766
Q ss_pred hhhhcCCCcccchhhccccccCcceEEEec-ChhHHHHHHHhhhhccccc
Q 007128 532 DIEKRGCSGEDLLLEMDRILRPTGFVIIRD-KQSVVDFVKKYLRALNWEA 580 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~-~~~~~~~~~~~~~~~~w~~ 580 (617)
.++..++.++.|+ |||.+++.+ ......++.+.++..+|+.
T Consensus 110 ------~~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~ 151 (183)
T 2yxd_A 110 ------KNIEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNV 151 (183)
T ss_dssp ------SCHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEE
T ss_pred ------ccHHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeE
Confidence 2677899999999 999999987 5567778888999888876
No 328
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.50 E-value=4e-09 Score=110.00 Aligned_cols=124 Identities=14% Similarity=0.159 Sum_probs=80.4
Q ss_pred hhHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCCCcccccc
Q 007128 192 DKYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGIPAYLGVL 267 (617)
Q Consensus 192 ~~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~ 267 (617)
-.|.+.+...+..... .....+..+|||||||+|.++..+++. .|+++|+++.+++.++..+......++.+..+
T Consensus 68 ~~Y~e~m~~~~~~l~~-~~p~p~~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~ 146 (317)
T 3gjy_A 68 FEYMRWIATGARAFID-AHQDASKLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVD 146 (317)
T ss_dssp SHHHHHHHHHHHHHHH-HHSCGGGCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEES
T ss_pred hHHHHHHHHHHHhhcc-cCCCCCCCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEEC
Confidence 4677776654431000 002232348999999999999999873 47889998877766654333222335677777
Q ss_pred ccccc--CCCCCccccccccccccccccc----cceEEEEecccccCCceeeecCh
Q 007128 268 GTKRL--PYPSRSFELAHCSRCRIDWLQR----DGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 268 d~~~l--pf~~~sFDlV~~s~~l~h~~~~----~~~~L~el~RvLrPGG~lvis~p 317 (617)
|.... .+++++||+|++... .++... ...+++++.++|+|||+|++...
T Consensus 147 Da~~~l~~~~~~~fDvIi~D~~-~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 147 DARMVAESFTPASRDVIIRDVF-AGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp CHHHHHHTCCTTCEEEEEECCS-TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cHHHHHhhccCCCCCEEEECCC-CccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 87654 345689999997532 222111 13588999999999999998653
No 329
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.50 E-value=7.4e-09 Score=101.07 Aligned_cols=114 Identities=15% Similarity=0.228 Sum_probs=72.2
Q ss_pred hhHHHhhhcchhhHhhhcCC--ceEEEEeecCCC-CCceEEE----e----eccc--ccchhhhhhhcccCC-cc--hhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDG-PNTLKLI----Y----DRGL--IGSIHNWCEAYSTYP-RT--YDL 523 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~-~~~l~~~----~----~rgl--~~~~~~~~e~~~~~p-~t--fDl 523 (617)
.+|||+|||+|.++..|++. +. .|+.+|. +.|++.+ . .+|+ +-.++.-.+.++ ++ ++ +|+
T Consensus 29 ~~vLDiGcG~G~~~~~la~~~p~~---~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~-~~~~~d~v~~ 104 (218)
T 3mq2_A 29 DVVLDVGTGDGKHPYKVARQNPSR---LVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLP-PLSGVGELHV 104 (218)
T ss_dssp EEEEEESCTTCHHHHHHHHHCTTE---EEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCC-SCCCEEEEEE
T ss_pred CEEEEecCCCCHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCC-CCCCCCEEEE
Confidence 35999999999999999987 55 5666664 5666642 1 2333 111121112233 23 33 444
Q ss_pred hhhhhhhh--hhhhcCCCcccchhhccccccCcceEEEecCh------------------h-HHHHHHHhhhhcccccc
Q 007128 524 LHAWTVFS--DIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ------------------S-VVDFVKKYLRALNWEAV 581 (617)
Q Consensus 524 vh~~~~~~--~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~------------------~-~~~~~~~~~~~~~w~~~ 581 (617)
+.++.... |+. +...+|.|+.|+|||||.+++.... . ..+.+++++...+|+..
T Consensus 105 ~~~~~~~~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~ 179 (218)
T 3mq2_A 105 LMPWGSLLRGVLG----SSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLA 179 (218)
T ss_dssp ESCCHHHHHHHHT----SSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEE
T ss_pred Eccchhhhhhhhc----cHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCce
Confidence 44443432 444 6689999999999999999996321 1 23458888888888863
No 330
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.50 E-value=5.2e-09 Score=106.79 Aligned_cols=106 Identities=12% Similarity=0.062 Sum_probs=75.5
Q ss_pred eEEEeeccccccccccccc-----chhhhhccCCCccchhhhHHHHHhCC-CcccccccccccCC----CCCcccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLS-----SDVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRLPY----PSRSFELAHCS 285 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~-----~~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~lpf----~~~sFDlV~~s 285 (617)
.+|||+|||+|..+..|++ ..|+++|+++.++..++. .+...++ ++.+...|+..++. .+++||+|++.
T Consensus 85 ~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~-~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d 163 (274)
T 3ajd_A 85 DFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKS-NINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLD 163 (274)
T ss_dssp CEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHH-HHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEE
T ss_pred CEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHH-HHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEEc
Confidence 6899999999999988875 258999999988776663 3444455 57777888777654 25789999975
Q ss_pred cc-----ccc------------cccccceEEEEecccccCCceeeecChhhhcC
Q 007128 286 RC-----RID------------WLQRDGILLLELDRLLRPGGYFAYSSPEAYAQ 322 (617)
Q Consensus 286 ~~-----l~h------------~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~ 322 (617)
-- .++ .......+|.++.++|||||++++++....+.
T Consensus 164 ~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ 217 (274)
T 3ajd_A 164 APCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVE 217 (274)
T ss_dssp ECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTT
T ss_pred CCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChH
Confidence 21 011 11222457888999999999999986554433
No 331
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.50 E-value=4.3e-09 Score=109.73 Aligned_cols=101 Identities=14% Similarity=0.101 Sum_probs=74.2
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHH-h----CCCcccccccccc-cCCCCCccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALE-R----GIPAYLGVLGTKR-LPYPSRSFELAHC 284 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~-r----g~~~~~~~~d~~~-lpf~~~sFDlV~~ 284 (617)
..+|||||||+|.++..++++ .|+++|+++.++..++..+... . ..++.+..+|+.. ++..+++||+|++
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVII 157 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEE
Confidence 368999999999999998865 5899999998887776443321 1 2356777778765 3445678999998
Q ss_pred ccccccc---ccc----cceEEEEecccccCCceeeecC
Q 007128 285 SRCRIDW---LQR----DGILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 285 s~~l~h~---~~~----~~~~L~el~RvLrPGG~lvis~ 316 (617)
... .++ ... ...+++++.++|+|||++++..
T Consensus 158 d~~-~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 158 DLT-DPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp ECC-CCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCC-CcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 654 343 111 1357899999999999999964
No 332
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.49 E-value=7.3e-09 Score=104.18 Aligned_cols=96 Identities=9% Similarity=0.081 Sum_probs=70.6
Q ss_pred eEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCC--Cccccccccccc-CC------CCCcccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRL-PY------PSRSFEL 281 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~l-pf------~~~sFDl 281 (617)
.+|||||||+|..+..|++. .|+++|+++.++..++. ...+.++ ++.+..+|+... +. ++++||+
T Consensus 81 ~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~-~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 159 (247)
T 1sui_A 81 KNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLP-VIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDF 159 (247)
T ss_dssp CEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHH-HHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSE
T ss_pred CEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEE
Confidence 58999999999988888753 58999999988877774 3334454 366777776542 32 2578999
Q ss_pred ccccccccccccccceEEEEecccccCCceeeecC
Q 007128 282 AHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 282 V~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~ 316 (617)
|++... ......++.++.++|||||++++..
T Consensus 160 V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 160 IFVDAD----KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp EEECSC----STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEcCc----hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 997543 2223468889999999999999854
No 333
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.49 E-value=5.8e-09 Score=100.86 Aligned_cols=110 Identities=13% Similarity=0.075 Sum_probs=78.6
Q ss_pred hhhHHHhhhcchhhHhhhcCCc--eEEEEeecCCC-CCceEEEeec----ccccchhhhhhhc-ccC--Ccchhhhhhhh
Q 007128 459 LRNLMDMKAHLGSFAAALKEKD--VWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWCEAY-STY--PRTYDLLHAWT 528 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~~--~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~e~~-~~~--p~tfDlvh~~~ 528 (617)
-.+|||+|||+|.++..|++.+ . .|+.+|. +.+++.+.++ |+ ..+...+.++ ... ..+||+|.+..
T Consensus 41 ~~~vLDiG~G~G~~~~~la~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~D~i~~~~ 116 (204)
T 3e05_A 41 DLVMWDIGAGSASVSIEASNLMPNG---RIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGLDDLPDPDRVFIGG 116 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHHCTTS---EEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTCTTSCCCSEEEESC
T ss_pred CCEEEEECCCCCHHHHHHHHHCCCC---EEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhhhcCCCCCEEEECC
Confidence 3479999999999999999875 4 4666664 5777666654 32 1122112222 111 27899999876
Q ss_pred hhhhhhhcCCCcccchhhccccccCcceEEEecCh-hHHHHHHHhhhhcccc
Q 007128 529 VFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ-SVVDFVKKYLRALNWE 579 (617)
Q Consensus 529 ~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~-~~~~~~~~~~~~~~w~ 579 (617)
.+. ++..++.++.|+|||||.+++.... ...+++.+++++.+|+
T Consensus 117 ~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~~ 161 (204)
T 3e05_A 117 SGG-------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYM 161 (204)
T ss_dssp CTT-------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTCE
T ss_pred CCc-------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCCc
Confidence 654 5678999999999999999998544 5677888888888884
No 334
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.49 E-value=3e-09 Score=113.76 Aligned_cols=124 Identities=10% Similarity=0.094 Sum_probs=81.8
Q ss_pred HHHHHHhhccccCccchhhHHHhhhc------chhhHhhhcCC---ceEEEEeecCCC-CCceEEEeeccc---ccchhh
Q 007128 443 VDSYWNLLSPKIQSNSLRNLMDMKAH------LGSFAAALKEK---DVWVMSVVPEDG-PNTLKLIYDRGL---IGSIHN 509 (617)
Q Consensus 443 V~~y~~~l~~~i~~~~~r~vLD~g~G------~G~fa~~L~~~---~~~v~~v~~~~~-~~~l~~~~~rgl---~~~~~~ 509 (617)
...|.+.|.++.. +-.+|||+||| +|+.+..|+++ +. .|+.+|. ++|.. ....+ .|...+
T Consensus 203 ~~~Ye~lL~~l~~--~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a---~V~GVDiSp~m~~--~~~rI~fv~GDa~d 275 (419)
T 3sso_A 203 TPHYDRHFRDYRN--QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRG---QIYGLDIMDKSHV--DELRIRTIQGDQND 275 (419)
T ss_dssp HHHHHHHHGGGTT--SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTC---EEEEEESSCCGGG--CBTTEEEEECCTTC
T ss_pred HHHHHHHHHhhcC--CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCC---EEEEEECCHHHhh--cCCCcEEEEecccc
Confidence 4467777765332 23579999999 78888777753 44 4555663 45531 11122 233322
Q ss_pred hhhhcc----cCCcchhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecCh------------------hHHH
Q 007128 510 WCEAYS----TYPRTYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ------------------SVVD 567 (617)
Q Consensus 510 ~~e~~~----~~p~tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~------------------~~~~ 567 (617)
.+|. .-+++||+|+++.. .+.. +...+|.|+.|+|||||+++|.|-. .+++
T Consensus 276 --lpf~~~l~~~d~sFDlVisdgs-H~~~----d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~ 348 (419)
T 3sso_A 276 --AEFLDRIARRYGPFDIVIDDGS-HINA----HVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLG 348 (419)
T ss_dssp --HHHHHHHHHHHCCEEEEEECSC-CCHH----HHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHH
T ss_pred --cchhhhhhcccCCccEEEECCc-ccch----hHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHH
Confidence 1122 00389999998643 2222 5678999999999999999997654 2688
Q ss_pred HHHHhhhhccccc
Q 007128 568 FVKKYLRALNWEA 580 (617)
Q Consensus 568 ~~~~~~~~~~w~~ 580 (617)
.++++++.++|..
T Consensus 349 ~lk~l~D~l~~~~ 361 (419)
T 3sso_A 349 LLKSLIDAIQHQE 361 (419)
T ss_dssp HHHHHHHHHTGGG
T ss_pred HHHHHHHHhcccc
Confidence 8999999999987
No 335
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.49 E-value=1.3e-09 Score=111.13 Aligned_cols=102 Identities=13% Similarity=0.052 Sum_probs=69.4
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc---ccchhhhhhhccc-CCcchhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL---IGSIHNWCEAYST-YPRTYDLLHAWTVF 530 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl---~~~~~~~~e~~~~-~p~tfDlvh~~~~~ 530 (617)
.+|||+|||+|.++..|++.+. .+|+.+|. +.+++.+.++ |+ +..++.-.+.++. -+++||+|.+..++
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 143 (298)
T 1ri5_A 66 DSVLDLGCGKGGDLLKYERAGI--GEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSF 143 (298)
T ss_dssp CEEEEETCTTTTTHHHHHHHTC--SEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCG
T ss_pred CeEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECchh
Confidence 4699999999999999987654 14556663 5666666554 21 1111111122221 13899999999888
Q ss_pred hhhhhcCCCcccchhhccccccCcceEEEecCh
Q 007128 531 SDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 531 ~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
+|+..+..+...+|.++.|+|||||++++..+.
T Consensus 144 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 144 HYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp GGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 763212236778999999999999999998765
No 336
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.49 E-value=5e-09 Score=110.56 Aligned_cols=141 Identities=16% Similarity=0.200 Sum_probs=90.6
Q ss_pred cchhhHHHhhhcchhhHhhhcCC--ceEEEEeecCCCCCceEEEeec----ccccchhhhhhhc-ccCCcchhhhhhhhh
Q 007128 457 NSLRNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDGPNTLKLIYDR----GLIGSIHNWCEAY-STYPRTYDLLHAWTV 529 (617)
Q Consensus 457 ~~~r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~~~~l~~~~~r----gl~~~~~~~~e~~-~~~p~tfDlvh~~~~ 529 (617)
..-.+|||+|||+|.++..|+++ ++. ++.+|.+.+++.+.++ |+-..+...+.++ ..+|..||+|.+..+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~---~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~v 258 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVS---ATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIILSFV 258 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCE---EEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEEEEEEESC
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCE---EEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCCCccEEEEccc
Confidence 34457999999999999999865 343 3333435666665543 3211111111221 234556999999999
Q ss_pred hhhhhhcCCCcccchhhccccccCcceEEEecCh--h------------------------HHHHHHHhhhhcccccccc
Q 007128 530 FSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ--S------------------------VVDFVKKYLRALNWEAVAT 583 (617)
Q Consensus 530 ~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~--~------------------------~~~~~~~~~~~~~w~~~~~ 583 (617)
++|+... +...+|.++.|+|||||+++|.+.. . ..+++++++++.+|+.+ +
T Consensus 259 l~~~~~~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~-~ 335 (360)
T 1tw3_A 259 LLNWPDH--DAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVE-E 335 (360)
T ss_dssp GGGSCHH--HHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEE-E
T ss_pred ccCCCHH--HHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEE-E
Confidence 9876522 2257999999999999999998754 1 13568888999999886 4
Q ss_pred cccCCCCCCC-CCCeEEEEEEec
Q 007128 584 TADASSDSDK-DGDEVVFIVQKK 605 (617)
Q Consensus 584 ~~~~~~~~~~-~~~~~~l~~~K~ 605 (617)
+.. ..... .-...++.|+|+
T Consensus 336 ~~~--~~~~~~~~~~~~i~~~~~ 356 (360)
T 1tw3_A 336 VRQ--LPSPTIPYDLSLLVLAPA 356 (360)
T ss_dssp EEE--EECSSSSCEEEEEEEEEC
T ss_pred EEe--CCCCcccCccEEEEEEeC
Confidence 443 11100 011578888884
No 337
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.47 E-value=1.3e-08 Score=97.24 Aligned_cols=91 Identities=18% Similarity=0.082 Sum_probs=62.3
Q ss_pred eEEEeecccccccccccccc-------------hhhhhccCCCccchhhhHHHHHhCCCcccc-cccccccC--------
Q 007128 216 RTVLDVGCGVASFGAYLLSS-------------DVITMSLAPNDVHQNQIQFALERGIPAYLG-VLGTKRLP-------- 273 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-------------~V~gvDis~~dl~~a~~~~a~~rg~~~~~~-~~d~~~lp-------- 273 (617)
.+|||+|||+|.++..|++. .|+++|+++.... ..+.+. .+|+...+
T Consensus 24 ~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~-----------~~~~~~~~~d~~~~~~~~~~~~~ 92 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPL-----------EGATFLCPADVTDPRTSQRILEV 92 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCC-----------TTCEEECSCCTTSHHHHHHHHHH
T ss_pred CEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccC-----------CCCeEEEeccCCCHHHHHHHHHh
Confidence 68999999999999888754 3889999884210 123344 45544332
Q ss_pred CCCCccccccccccc---ccccccc-------ceEEEEecccccCCceeeecCh
Q 007128 274 YPSRSFELAHCSRCR---IDWLQRD-------GILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 274 f~~~sFDlV~~s~~l---~h~~~~~-------~~~L~el~RvLrPGG~lvis~p 317 (617)
+++++||+|+|..+. .++..+. ..++.++.++|||||.+++..+
T Consensus 93 ~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 93 LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 345689999985431 1222221 3688999999999999999754
No 338
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.47 E-value=3.7e-09 Score=107.74 Aligned_cols=98 Identities=11% Similarity=0.044 Sum_probs=56.4
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCCCCceEEEeecccc----c-chhhh--hhhcccCC-cchhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDGPNTLKLIYDRGLI----G-SIHNW--CEAYSTYP-RTYDLLHAWTVFS 531 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~~~~l~~~~~rgl~----~-~~~~~--~e~~~~~p-~tfDlvh~~~~~~ 531 (617)
..|||+|||+|+++..|+++ . .|+.+|...|+..+.++... + .+... +.++..+| ++||+|.|+.. .
T Consensus 76 ~~VLDlGcGtG~~s~~la~~-~---~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~V~sd~~-~ 150 (265)
T 2oxt_A 76 GRVVDLGCGRGGWSYYAASR-P---HVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLPVERTDVIMCDVG-E 150 (265)
T ss_dssp EEEEEESCTTSHHHHHHHTS-T---TEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC-C
T ss_pred CEEEEeCcCCCHHHHHHHHc-C---cEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCCCCCCcEEEEeCc-c
Confidence 36999999999999999987 3 34444432232212111110 0 11112 22333344 89999998765 2
Q ss_pred hhhhcCCCc---ccchhhccccccCcc--eEEEecC
Q 007128 532 DIEKRGCSG---EDLLLEMDRILRPTG--FVIIRDK 562 (617)
Q Consensus 532 ~~~~~~c~~---~~~l~Em~RiLrPgG--~~ii~~~ 562 (617)
+...+.-+. ..+|.++.|+||||| .|++...
T Consensus 151 ~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 151 SSPKWSVESERTIKILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred cCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeC
Confidence 110000000 128899999999999 9988653
No 339
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.47 E-value=5.9e-09 Score=103.47 Aligned_cols=118 Identities=14% Similarity=0.137 Sum_probs=68.3
Q ss_pred hhHHHhhhcchhhHhhhc--CCceEEEEeecCCC--CCceEEE---eec----ccccchhhhhhhcccCC----cchhhh
Q 007128 460 RNLMDMKAHLGSFAAALK--EKDVWVMSVVPEDG--PNTLKLI---YDR----GLIGSIHNWCEAYSTYP----RTYDLL 524 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~--~~~~~v~~v~~~~~--~~~l~~~---~~r----gl~~~~~~~~e~~~~~p----~tfDlv 524 (617)
..|||+|||+|.++..|+ ..+. +|+.+|. +.|++.| .++ |+ ..+...+.+...+| ..+|.|
T Consensus 26 ~~vLDiGCG~G~~~~~la~~~~~~---~v~GvD~s~~~ml~~A~~A~~~~~~~~~-~~v~~~~~d~~~l~~~~~d~v~~i 101 (225)
T 3p2e_A 26 RVHIDLGTGDGRNIYKLAINDQNT---FYIGIDPVKENLFDISKKIIKKPSKGGL-SNVVFVIAAAESLPFELKNIADSI 101 (225)
T ss_dssp EEEEEETCTTSHHHHHHHHTCTTE---EEEEECSCCGGGHHHHHHHTSCGGGTCC-SSEEEECCBTTBCCGGGTTCEEEE
T ss_pred CEEEEEeccCcHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHHHHHcCC-CCeEEEEcCHHHhhhhccCeEEEE
Confidence 359999999999999998 4455 5666673 4565554 433 43 11111122222233 344444
Q ss_pred hhhhhhhhh-hhcCCCcccchhhccccccCcceEEEecC-------------------hhH-HH-HHHHhhhhcccccc
Q 007128 525 HAWTVFSDI-EKRGCSGEDLLLEMDRILRPTGFVIIRDK-------------------QSV-VD-FVKKYLRALNWEAV 581 (617)
Q Consensus 525 h~~~~~~~~-~~~~c~~~~~l~Em~RiLrPgG~~ii~~~-------------------~~~-~~-~~~~~~~~~~w~~~ 581 (617)
+++..+.+. ...+-+...+|.|+.|+|||||.++|..+ .+. .+ ++...+.+.+|+..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~ 180 (225)
T 3p2e_A 102 SILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRID 180 (225)
T ss_dssp EEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEEE
T ss_pred EEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCee
Confidence 443222211 11122456789999999999999999111 011 11 37778888888763
No 340
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.47 E-value=1.3e-08 Score=101.25 Aligned_cols=117 Identities=11% Similarity=0.050 Sum_probs=83.3
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCCC--ccccccccc-ccCCCCCccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGIP--AYLGVLGTK-RLPYPSRSFELAHCSRCR 288 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~~--~~~~~~d~~-~lpf~~~sFDlV~~s~~l 288 (617)
.+|||||||+|.++..++.. .|+++|+++..+..|+ +.+...++. +.+..+|.. .++. ...||+|+.....
T Consensus 17 ~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~-~N~~~~gl~~~i~~~~~d~l~~l~~-~~~~D~IviaG~G 94 (225)
T 3kr9_A 17 AILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAV-KNVEAHGLKEKIQVRLANGLAAFEE-TDQVSVITIAGMG 94 (225)
T ss_dssp EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHH-HHHHHTTCTTTEEEEECSGGGGCCG-GGCCCEEEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHH-HHHHHcCCCceEEEEECchhhhccc-CcCCCEEEEcCCC
Confidence 68999999999999988874 4899999998888887 455556663 667777763 3332 2269988865431
Q ss_pred cccccccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhhhhc
Q 007128 289 IDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRIAAK 347 (617)
Q Consensus 289 ~h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~v~~ 347 (617)
-.. ...++.+..+.|+|+|+|+++... . ...+.+.+.+.||.++..
T Consensus 95 g~~---i~~Il~~~~~~L~~~~~lVlq~~~----~------~~~vr~~L~~~Gf~i~~e 140 (225)
T 3kr9_A 95 GRL---IARILEEGLGKLANVERLILQPNN----R------EDDLRIWLQDHGFQIVAE 140 (225)
T ss_dssp HHH---HHHHHHHTGGGCTTCCEEEEEESS----C------HHHHHHHHHHTTEEEEEE
T ss_pred hHH---HHHHHHHHHHHhCCCCEEEEECCC----C------HHHHHHHHHHCCCEEEEE
Confidence 111 134677888999999999996321 1 256778889999976653
No 341
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.46 E-value=5.6e-09 Score=109.28 Aligned_cols=100 Identities=13% Similarity=0.112 Sum_probs=70.4
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHH-h---CCCcccccccccc-cCCCCCccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALE-R---GIPAYLGVLGTKR-LPYPSRSFELAHCSR 286 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~-r---g~~~~~~~~d~~~-lpf~~~sFDlV~~s~ 286 (617)
.+|||||||+|.++..+++. .|+++|+++.+++.++..+... . ..++.+..+|... ++..+++||+|++..
T Consensus 118 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d~ 197 (321)
T 2pt6_A 118 KNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDS 197 (321)
T ss_dssp CEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEEC
T ss_pred CEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEECC
Confidence 68999999999999988865 5899999998777666432210 1 2346677777654 333457899999754
Q ss_pred cccccccc--c--ceEEEEecccccCCceeeecC
Q 007128 287 CRIDWLQR--D--GILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 287 ~l~h~~~~--~--~~~L~el~RvLrPGG~lvis~ 316 (617)
. .++... . ..+++++.++|+|||++++..
T Consensus 198 ~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 198 S-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp C-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred c-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 2 222111 1 357889999999999999964
No 342
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.46 E-value=2.3e-08 Score=101.63 Aligned_cols=93 Identities=15% Similarity=0.084 Sum_probs=68.3
Q ss_pred eeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHH----HhCCCcccccccccccCCCCCccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFAL----ERGIPAYLGVLGTKRLPYPSRSFELAHCSRCR 288 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~----~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l 288 (617)
..+|||||||+|.++..++++ .|+++|+++.+++.++..+.. -....+.+..+|..... ++||+|++..
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d~-- 147 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCLQ-- 147 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEESS--
T ss_pred CCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEECC--
Confidence 368999999999988877654 588999999888777643321 11234666777776654 7899999752
Q ss_pred cccccccceEEEEecccccCCceeeecC
Q 007128 289 IDWLQRDGILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 289 ~h~~~~~~~~L~el~RvLrPGG~lvis~ 316 (617)
.++..+++++.++|+|||++++..
T Consensus 148 ----~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 148 ----EPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp ----CCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred ----CChHHHHHHHHHhcCCCcEEEEEc
Confidence 122347889999999999999863
No 343
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.46 E-value=2.5e-08 Score=108.35 Aligned_cols=104 Identities=13% Similarity=0.123 Sum_probs=76.3
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCCCcccccccccccC--CCCCccccccc----c
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLP--YPSRSFELAHC----S 285 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lp--f~~~sFDlV~~----s 285 (617)
.+|||+|||+|..+..+++. .|+++|+++..+..++ +.+...++++.+..+|...++ +++++||+|++ +
T Consensus 248 ~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~-~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcs 326 (429)
T 1sqg_A 248 EHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVY-DNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCS 326 (429)
T ss_dssp CEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHH-HHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECCCC
T ss_pred CeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCCCC
Confidence 68999999999998888764 5899999998887776 344455667778888887766 56678999985 2
Q ss_pred c-ccccccccc----------------ceEEEEecccccCCceeeecChhhh
Q 007128 286 R-CRIDWLQRD----------------GILLLELDRLLRPGGYFAYSSPEAY 320 (617)
Q Consensus 286 ~-~l~h~~~~~----------------~~~L~el~RvLrPGG~lvis~p~~~ 320 (617)
. ..++..++. ..+|.++.++|||||++++++....
T Consensus 327 g~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 327 ATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp CGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCC
T ss_pred cccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 1 112111110 2578899999999999999865443
No 344
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.45 E-value=3.9e-09 Score=109.26 Aligned_cols=103 Identities=16% Similarity=0.064 Sum_probs=69.8
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc-------------ccchhhhhhhcc---cC---Cc
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL-------------IGSIHNWCEAYS---TY---PR 519 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl-------------~~~~~~~~e~~~---~~---p~ 519 (617)
.+|||+|||+|.++..|++.+. ..|+.+|. +.+++.+.++.- +..+..-++.++ .+ ++
T Consensus 36 ~~VLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 36 ITVLDLGCGKGGDLLKWKKGRI--NKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp CEEEEETCTTTTTHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CEEEEECCCCcHHHHHHHhcCC--CEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 4699999999999999987543 15666664 577766655421 111111112222 13 25
Q ss_pred chhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecChh
Q 007128 520 TYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS 564 (617)
Q Consensus 520 tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~ 564 (617)
+||+|.|..+++++..+..++..+|.++.|+|||||.+++..+..
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 999999999988762122245789999999999999999987754
No 345
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.45 E-value=1.8e-08 Score=102.58 Aligned_cols=110 Identities=11% Similarity=0.148 Sum_probs=76.9
Q ss_pred cchhhHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CCceEEEeec-----cc--ccch-hhhhhhcccCC-cchhh
Q 007128 457 NSLRNLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PNTLKLIYDR-----GL--IGSI-HNWCEAYSTYP-RTYDL 523 (617)
Q Consensus 457 ~~~r~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~~l~~~~~r-----gl--~~~~-~~~~e~~~~~p-~tfDl 523 (617)
..-.+|||+|||+|.++..|++. +. .|+.+|. +.+++.|.++ |+ +-.+ .|..+. ++ ++||+
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~---~~~~~fD~ 182 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKG---TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF---ISDQMYDA 182 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSS---EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC---CCSCCEEE
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCC---EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhcc---CcCCCccE
Confidence 33457999999999999999876 45 5666664 5666655554 32 1111 122222 33 78999
Q ss_pred hhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecChh-HHHHHHHhhhhcccccc
Q 007128 524 LHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS-VVDFVKKYLRALNWEAV 581 (617)
Q Consensus 524 vh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~-~~~~~~~~~~~~~w~~~ 581 (617)
|.+ +.. +...+|.++.|+|||||.+++..+.. ..+++.+.+...+|..+
T Consensus 183 Vi~-----~~~----~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~~ 232 (275)
T 1yb2_A 183 VIA-----DIP----DPWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHHL 232 (275)
T ss_dssp EEE-----CCS----CGGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEEE
T ss_pred EEE-----cCc----CHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEE
Confidence 987 232 66789999999999999999988765 56677777777777654
No 346
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.44 E-value=1e-08 Score=109.68 Aligned_cols=100 Identities=14% Similarity=0.094 Sum_probs=62.7
Q ss_pred hhHHHhhhcchhhHhhhcCC--ceEEEEeecCCC-CCceEEEeec----cccc--chhhhhhh-cccCC-cchhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDG-PNTLKLIYDR----GLIG--SIHNWCEA-YSTYP-RTYDLLHAWT 528 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~-~~~l~~~~~r----gl~~--~~~~~~e~-~~~~p-~tfDlvh~~~ 528 (617)
.+|||+|||+|.++..|++. +. .|+.+|. +.+++.+.++ |+-. .++..+.+ +..++ ++||+|.++-
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~---~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~fD~Ii~np 300 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQA---KVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNP 300 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTCEEEEEECC
T ss_pred CeEEEEeCcchHHHHHHHHHCCCC---EEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCCeeEEEECC
Confidence 57999999999999999987 45 4566664 5666655543 3211 11111111 12234 7999999988
Q ss_pred hhhhhhh-cCCCcccchhhccccccCcceEEEecC
Q 007128 529 VFSDIEK-RGCSGEDLLLEMDRILRPTGFVIIRDK 562 (617)
Q Consensus 529 ~~~~~~~-~~c~~~~~l~Em~RiLrPgG~~ii~~~ 562 (617)
.|.+... ..-....++.++.|+|||||.++|...
T Consensus 301 pfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 301 PFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp CC-------CCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 8764320 111223679999999999999998544
No 347
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.44 E-value=1.9e-08 Score=101.55 Aligned_cols=95 Identities=14% Similarity=0.119 Sum_probs=63.2
Q ss_pred hhhHHHhhhcchhhHhhhcCCc---eEEEEeecCCC-CC------ceEEEeec----cc---ccchh-h-h-hhhcccCC
Q 007128 459 LRNLMDMKAHLGSFAAALKEKD---VWVMSVVPEDG-PN------TLKLIYDR----GL---IGSIH-N-W-CEAYSTYP 518 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~~---~~v~~v~~~~~-~~------~l~~~~~r----gl---~~~~~-~-~-~e~~~~~p 518 (617)
-.+|||+|||+|.++..|+++. .. |+.+|. +. +++.+.++ |+ +..++ + . .+.++ ++
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~g~~~~---v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~ 119 (275)
T 3bkx_A 44 GEKILEIGCGQGDLSAVLADQVGSSGH---VTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGP-IA 119 (275)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCTTCE---EEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGG-GT
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCE---EEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCC-CC
Confidence 3479999999999999999863 53 444453 33 67666554 22 11111 1 1 11222 33
Q ss_pred -cchhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEec
Q 007128 519 -RTYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRD 561 (617)
Q Consensus 519 -~tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~ 561 (617)
++||+|++..++.|+. +...++..++++++|||++++.+
T Consensus 120 ~~~fD~v~~~~~l~~~~----~~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 120 DQHFDRVVLAHSLWYFA----SANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp TCCCSEEEEESCGGGSS----CHHHHHHHHHHHTTTCSEEEEEE
T ss_pred CCCEEEEEEccchhhCC----CHHHHHHHHHHHhCCCCEEEEEE
Confidence 8999999999999876 55666666677777799999964
No 348
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.44 E-value=1.2e-08 Score=100.16 Aligned_cols=117 Identities=8% Similarity=0.112 Sum_probs=74.7
Q ss_pred hHHHhhhcchhhHhhhcCC--ceEEEEeecCCC-CCceEEEeec----cc--ccchhhhhhhccc-CC-cchhhhhhhhh
Q 007128 461 NLMDMKAHLGSFAAALKEK--DVWVMSVVPEDG-PNTLKLIYDR----GL--IGSIHNWCEAYST-YP-RTYDLLHAWTV 529 (617)
Q Consensus 461 ~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~-~~~l~~~~~r----gl--~~~~~~~~e~~~~-~p-~tfDlvh~~~~ 529 (617)
.|||+|||+|.++..|++. +. +|+.+|. +.+++.|.++ |+ +-.++.-.+.++. ++ ++||.|+++..
T Consensus 41 ~vLDiGcG~G~~~~~la~~~p~~---~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 41 IHIEVGTGKGQFISGMAKQNPDI---NYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp EEEEECCTTSHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred eEEEEecCCCHHHHHHHHHCCCC---CEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 5999999999999999875 44 6777774 5777666554 33 1122211112221 33 89999876422
Q ss_pred hhhh----hhcCCCcccchhhccccccCcceEEEec-ChhHHHHHHHhhhhccccc
Q 007128 530 FSDI----EKRGCSGEDLLLEMDRILRPTGFVIIRD-KQSVVDFVKKYLRALNWEA 580 (617)
Q Consensus 530 ~~~~----~~~~c~~~~~l~Em~RiLrPgG~~ii~~-~~~~~~~~~~~~~~~~w~~ 580 (617)
.++. ...+.....+|.++.|+|||||.|++.. .....+.+...+...+|+.
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~ 173 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLL 173 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEE
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCcc
Confidence 1110 0122224678999999999999998875 5555666677776666654
No 349
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.44 E-value=8e-09 Score=103.71 Aligned_cols=95 Identities=11% Similarity=0.094 Sum_probs=65.3
Q ss_pred hhhHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CCceEEEeec----ccc---cch-hhhhhhcccCC--cchhhh
Q 007128 459 LRNLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PNTLKLIYDR----GLI---GSI-HNWCEAYSTYP--RTYDLL 524 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~~l~~~~~r----gl~---~~~-~~~~e~~~~~p--~tfDlv 524 (617)
-++|||+|||+|.++..|++. +. .|+.+|. +.+++.|.++ |+- -.+ .+..+.++..+ .+||+|
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADG---QLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTC---EEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 357999999999999999986 55 4566664 5676666555 431 111 12223334443 499999
Q ss_pred hhhhhhhhhhhcCCCcccchhhccccccCcceEEEecCh
Q 007128 525 HAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 525 h~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
+++.... +...++.++.|+|||||++++.+..
T Consensus 141 ~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 141 FIDADKP-------NNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp EECSCGG-------GHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred EECCchH-------HHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 9755333 3456899999999999999987664
No 350
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.44 E-value=9.1e-09 Score=105.55 Aligned_cols=98 Identities=13% Similarity=0.089 Sum_probs=69.2
Q ss_pred eEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHH-----------hCCCcccccccccc-cCCCCCccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALE-----------RGIPAYLGVLGTKR-LPYPSRSFE 280 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~-----------rg~~~~~~~~d~~~-lpf~~~sFD 280 (617)
.+|||||||+|.++..++++ .|+++|+++.++..++..+ .. ...++.+..+|+.. ++. +++||
T Consensus 77 ~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~fD 154 (281)
T 1mjf_A 77 KRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGFD 154 (281)
T ss_dssp CEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCEE
T ss_pred CeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cCCee
Confidence 68999999999999888765 5899999998877776443 11 12346667777544 222 57899
Q ss_pred cccccccccccccc----cceEEEEecccccCCceeeecC
Q 007128 281 LAHCSRCRIDWLQR----DGILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 281 lV~~s~~l~h~~~~----~~~~L~el~RvLrPGG~lvis~ 316 (617)
+|++... .++... ...+++++.++|+|||++++..
T Consensus 155 ~Ii~d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 155 VIIADST-DPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEECC-CCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9997643 222111 1347889999999999999964
No 351
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.43 E-value=1.5e-08 Score=100.54 Aligned_cols=97 Identities=16% Similarity=0.144 Sum_probs=69.9
Q ss_pred eEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCC--Cccccccccc----ccCCCC--Cccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTK----RLPYPS--RSFELA 282 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~----~lpf~~--~sFDlV 282 (617)
.+|||||||+|..+..|+.. .|+++|+++..+..++... .+.++ .+.+..+|+. .++..+ ++||+|
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~-~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V 152 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYW-QKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLI 152 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHH-HHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEE
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEE
Confidence 58999999999988888763 5899999998877776433 33344 3566666643 334434 789999
Q ss_pred cccccccccccccceEEEEecccccCCceeeecCh
Q 007128 283 HCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 283 ~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p 317 (617)
++... ..+...++.++.++|+|||++++...
T Consensus 153 ~~d~~----~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 153 FIDAD----KRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp EECSC----GGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred EECCC----HHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 86543 22334578999999999999999643
No 352
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.43 E-value=5.9e-09 Score=111.78 Aligned_cols=103 Identities=15% Similarity=0.098 Sum_probs=73.4
Q ss_pred eEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCC---Ccccccccccc-cCC---CCCcccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGI---PAYLGVLGTKR-LPY---PSRSFELAHCS 285 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~---~~~~~~~d~~~-lpf---~~~sFDlV~~s 285 (617)
.+|||+|||+|.++..++.. .|+++|+++.++..++ +.+...++ ++.+..+|+.. ++. ..++||+|++.
T Consensus 214 ~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~-~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~D 292 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSL-AHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIID 292 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHH-HHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHH-HHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEEC
Confidence 68999999999999998873 5899999999998887 44555555 56788888755 221 24589999974
Q ss_pred cccc--------ccccccceEEEEecccccCCceeeecChhh
Q 007128 286 RCRI--------DWLQRDGILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 286 ~~l~--------h~~~~~~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
--.. ........++.++.++|+|||+++++....
T Consensus 293 PP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 293 PPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp CCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 3211 111111235566789999999999976443
No 353
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.43 E-value=1.2e-08 Score=103.36 Aligned_cols=117 Identities=10% Similarity=0.078 Sum_probs=74.7
Q ss_pred hhHHHhhhcchhhHhhhcCC--ceEEEEeecCCC-CCceEEEeec-------ccccchhhhhhhccc---------C-Cc
Q 007128 460 RNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDG-PNTLKLIYDR-------GLIGSIHNWCEAYST---------Y-PR 519 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~-~~~l~~~~~r-------gl~~~~~~~~e~~~~---------~-p~ 519 (617)
.+|||+|||+|.++..|+.+ +. +|+.+|. +.+++.|.++ |+-..+.-.+.++.. + +.
T Consensus 38 ~~VLDlG~G~G~~~l~la~~~~~~---~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 38 CRIADLGAGAGAAGMAVAARLEKA---EVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp EEEEECCSSSSHHHHHHHHHCTTE---EEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred CEEEEeCChHhHHHHHHHHhCCCC---eEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 47999999999999999876 24 5666664 4555544432 221001111112211 3 38
Q ss_pred chhhhhhhhhhhhh--------------hhcCCCcccchhhccccccCcceEEEecChhHHHHHHHhhhhccccc
Q 007128 520 TYDLLHAWTVFSDI--------------EKRGCSGEDLLLEMDRILRPTGFVIIRDKQSVVDFVKKYLRALNWEA 580 (617)
Q Consensus 520 tfDlvh~~~~~~~~--------------~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~~~~~~~~~~~~~~w~~ 580 (617)
+||+|.++--|... ....++++.++.++.++|||||.|++-.+.....++...+..- |..
T Consensus 115 ~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~-~~~ 188 (260)
T 2ozv_A 115 HFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVAEIIAACGSR-FGG 188 (260)
T ss_dssp CEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHHHHHHHTTT-EEE
T ss_pred CcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHHHHHHHHHhc-CCc
Confidence 99999987333211 1133567889999999999999999988888777777777763 654
No 354
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.43 E-value=7.1e-09 Score=107.76 Aligned_cols=100 Identities=15% Similarity=0.054 Sum_probs=57.1
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeec--CCCCCceEEEeec--ccccchhhhhh-hcccCC-cchhhhhhhhhhh--
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVP--EDGPNTLKLIYDR--GLIGSIHNWCE-AYSTYP-RTYDLLHAWTVFS-- 531 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~--~~~~~~l~~~~~r--gl~~~~~~~~e-~~~~~p-~tfDlvh~~~~~~-- 531 (617)
..|||+|||+|+++..|++++ .|..|.. +.++.++..+..+ |. ..+...+. ++..+| .+||+|.|+..++
T Consensus 84 ~~VLDlGcG~G~~s~~la~~~-~V~gvD~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~D~~~l~~~~fD~V~sd~~~~~g 161 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGLK-NVREVKGLTKGGPGHEEPIPMSTYGW-NLVRLQSGVDVFFIPPERCDTLLCDIGESSP 161 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTST-TEEEEEEECCCSTTSCCCCCCCSTTG-GGEEEECSCCTTTSCCCCCSEEEECCCCCCS
T ss_pred CEEEEEcCCCCHHHHHHHhcC-CEEEEeccccCchhHHHHHHhhhcCC-CCeEEEeccccccCCcCCCCEEEECCccccC
Confidence 469999999999999999873 2333332 1112232221111 11 11111112 233333 8999999976553
Q ss_pred -hhhhcCCCcccchhhccccccCcceEEEecC
Q 007128 532 -DIEKRGCSGEDLLLEMDRILRPTGFVIIRDK 562 (617)
Q Consensus 532 -~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~ 562 (617)
+...+. ....+|.++.|+|||||.|++...
T Consensus 162 ~~~~d~~-~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 162 NPTVEAG-RTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp SHHHHHH-HHHHHHHHHHHHCCTTCEEEEEES
T ss_pred cchhhHH-HHHHHHHHHHHHhCCCCEEEEEeC
Confidence 111000 011489999999999999999654
No 355
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.43 E-value=2.4e-08 Score=99.75 Aligned_cols=111 Identities=14% Similarity=0.154 Sum_probs=70.7
Q ss_pred hhHHHhhhcchhhHhhhcCC------ceEEEEeecCCC-CCceEEEeecc-cccchh-hhhhh--cccCC-cchhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK------DVWVMSVVPEDG-PNTLKLIYDRG-LIGSIH-NWCEA--YSTYP-RTYDLLHAW 527 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~------~~~v~~v~~~~~-~~~l~~~~~rg-l~~~~~-~~~e~--~~~~p-~tfDlvh~~ 527 (617)
.+|||+|||+|.+++.|++. +. .|+.+|. +.+++.|...+ -+-.++ +..+. ++..+ .+||+|+++
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~---~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d 159 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDC---QVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFID 159 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCC---EEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCC---EEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEEC
Confidence 47999999999999999875 44 4556663 67766664211 011111 21111 22223 379999975
Q ss_pred hhhhhhhhcCCCcccchhhccc-cccCcceEEEecChh-----HHHHHHHhhhhc--cccc
Q 007128 528 TVFSDIEKRGCSGEDLLLEMDR-ILRPTGFVIIRDKQS-----VVDFVKKYLRAL--NWEA 580 (617)
Q Consensus 528 ~~~~~~~~~~c~~~~~l~Em~R-iLrPgG~~ii~~~~~-----~~~~~~~~~~~~--~w~~ 580 (617)
.. | .+...+|.|+.| +|||||++++.+... .-..+.++++.. +++.
T Consensus 160 ~~--~-----~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~ 213 (236)
T 2bm8_A 160 NA--H-----ANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSM 213 (236)
T ss_dssp SS--C-----SSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEE
T ss_pred Cc--h-----HhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEE
Confidence 44 2 156789999998 999999999987421 112567777766 4655
No 356
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.42 E-value=8.9e-09 Score=100.36 Aligned_cols=109 Identities=10% Similarity=-0.009 Sum_probs=76.2
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----ccccchhhhhhhccc-C--Ccchhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWCEAYST-Y--PRTYDLLHAWTVFS 531 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~e~~~~-~--p~tfDlvh~~~~~~ 531 (617)
.+|||+|||+|.++..|++.+. .|+.+|. +.+++.|.++ |+-..+...+.++.. + ...||+|.+...+
T Consensus 57 ~~vLDlGcG~G~~~~~la~~~~---~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~- 132 (204)
T 3njr_A 57 ELLWDIGGGSGSVSVEWCLAGG---RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGG- 132 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCC-
T ss_pred CEEEEecCCCCHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcc-
Confidence 4699999999999999998865 5666664 5777766654 332122222222222 1 2579999864422
Q ss_pred hhhhcCCCcccchhhccccccCcceEEEecC-hhHHHHHHHhhhhccccc
Q 007128 532 DIEKRGCSGEDLLLEMDRILRPTGFVIIRDK-QSVVDFVKKYLRALNWEA 580 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~-~~~~~~~~~~~~~~~w~~ 580 (617)
+.. ++.++.|+|||||.+++... .+...++.++++..+++.
T Consensus 133 -------~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i 174 (204)
T 3njr_A 133 -------SQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGGQL 174 (204)
T ss_dssp -------CHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEE
T ss_pred -------cHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCCcE
Confidence 455 99999999999999999765 456777888888888776
No 357
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.42 E-value=2.1e-08 Score=95.78 Aligned_cols=139 Identities=17% Similarity=0.144 Sum_probs=68.9
Q ss_pred hhHHHhhhcchhhHhhhcCC-c----------eEEEEeecCCCCCceEEEeeccc-ccchhhhh--hh-cccCC-cchhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK-D----------VWVMSVVPEDGPNTLKLIYDRGL-IGSIHNWC--EA-YSTYP-RTYDL 523 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~-~----------~~v~~v~~~~~~~~l~~~~~rgl-~~~~~~~~--e~-~~~~p-~tfDl 523 (617)
.+|||+|||+|.++..|+++ + . .|+.+|...+.....-+-+ .+.+.+.. +. ...++ ++||+
T Consensus 24 ~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~---~v~~vD~s~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~fD~ 100 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVG---FVLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEVLPGRRADV 100 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCC---EEEEECSSCCCCCTTCEEECSCCTTSHHHHHHHHHHSGGGCEEE
T ss_pred CEEEEeCCCCCHHHHHHHHHhccccccccCCCc---eEEEEechhcccCCCCeEEEeccCCCHHHHHHHHHhcCCCCCcE
Confidence 47999999999999999875 3 4 3455553222110000001 12222110 00 11133 68999
Q ss_pred hhhhhhhh----hhhhc---CCCcccchhhccccccCcceEEEecChh-HHHHHHHhhhhcccccccccccCCCCCCCCC
Q 007128 524 LHAWTVFS----DIEKR---GCSGEDLLLEMDRILRPTGFVIIRDKQS-VVDFVKKYLRALNWEAVATTADASSDSDKDG 595 (617)
Q Consensus 524 vh~~~~~~----~~~~~---~c~~~~~l~Em~RiLrPgG~~ii~~~~~-~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 595 (617)
|.|+..+. +...+ ......++.++.|+|||||.|++.+... ...++...+... |..+ ....+ .......
T Consensus 101 V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~-f~~v-~~~~~-~~~~~~~ 177 (196)
T 2nyu_A 101 ILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEE-FQNV-RIIKP-EASRKES 177 (196)
T ss_dssp EEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHHHH-EEEE-EEECC-C------
T ss_pred EEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHHHH-hcce-EEECC-cccCccC
Confidence 99754322 11100 0011478999999999999999985432 233444444432 4433 22211 1112234
Q ss_pred CeEEEEEEe
Q 007128 596 DEVVFIVQK 604 (617)
Q Consensus 596 ~~~~l~~~K 604 (617)
.|.+++++.
T Consensus 178 ~e~~~v~~g 186 (196)
T 2nyu_A 178 SEVYFLATQ 186 (196)
T ss_dssp --EEEEEEE
T ss_pred ceEEEEeee
Confidence 567777664
No 358
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.42 E-value=2.9e-08 Score=95.64 Aligned_cols=107 Identities=9% Similarity=0.031 Sum_probs=69.2
Q ss_pred eeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCcccccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDW 291 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~ 291 (617)
+.+|||+|||+|.++..++.. .|+++|+++.++..++. +..++.+..+|+..+| ++||+|+++..++++
T Consensus 52 ~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~-----~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~ 123 (200)
T 1ne2_A 52 GRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKR-----NCGGVNFMVADVSEIS---GKYDTWIMNPPFGSV 123 (200)
T ss_dssp TSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHH-----HCTTSEEEECCGGGCC---CCEEEEEECCCC---
T ss_pred CCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHH-----hcCCCEEEECcHHHCC---CCeeEEEECCCchhc
Confidence 368999999999999888765 48899988876655542 2115677888888765 689999998775544
Q ss_pred ccc-cceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhh
Q 007128 292 LQR-DGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMC 341 (617)
Q Consensus 292 ~~~-~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~g 341 (617)
... ...+++++.++| |+.+++..+.. +..+.+.+...|
T Consensus 124 ~~~~~~~~l~~~~~~~--g~~~~~~~~~~----------~~~~~~~~~~~g 162 (200)
T 1ne2_A 124 VKHSDRAFIDKAFETS--MWIYSIGNAKA----------RDFLRREFSARG 162 (200)
T ss_dssp ----CHHHHHHHHHHE--EEEEEEEEGGG----------HHHHHHHHHHHE
T ss_pred cCchhHHHHHHHHHhc--CcEEEEEcCch----------HHHHHHHHHHCC
Confidence 332 124677788887 55443332211 234556666666
No 359
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.42 E-value=8.8e-09 Score=102.91 Aligned_cols=118 Identities=17% Similarity=0.198 Sum_probs=70.8
Q ss_pred hhHHHhhhcchhhHhhhcCC--ceEEEEeecCCC-CCceEEEeec----------cc--ccchh-hhhhhccc-CC-cch
Q 007128 460 RNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDG-PNTLKLIYDR----------GL--IGSIH-NWCEAYST-YP-RTY 521 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~-~~~l~~~~~r----------gl--~~~~~-~~~e~~~~-~p-~tf 521 (617)
..|||+|||+|.++..|++. +. +|+.+|. +.|++.|.++ ++ +-.++ +..+.++. ++ ++|
T Consensus 48 ~~vLDiGcG~G~~~~~la~~~p~~---~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 48 VEFADIGCGYGGLLVELSPLFPDT---LILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp EEEEEETCTTCHHHHHHGGGSTTS---EEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CeEEEEccCCcHHHHHHHHHCCCC---eEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 35999999999999999976 34 5666664 5666655432 22 11111 11111221 33 899
Q ss_pred hhhhhhhhhhhh----hhcCCCcccchhhccccccCcceEEEe-cChhHHHHHHHhhhhcc-ccc
Q 007128 522 DLLHAWTVFSDI----EKRGCSGEDLLLEMDRILRPTGFVIIR-DKQSVVDFVKKYLRALN-WEA 580 (617)
Q Consensus 522 Dlvh~~~~~~~~----~~~~c~~~~~l~Em~RiLrPgG~~ii~-~~~~~~~~~~~~~~~~~-w~~ 580 (617)
|.|+++..-++. .+.+.....+|.++.|+|||||.|+|. +.....+.+.+.+.... |+.
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~~f~~ 189 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHPLFER 189 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEEE
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCCCccc
Confidence 998753222211 112223357999999999999999885 55556666666665553 544
No 360
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.42 E-value=3.8e-08 Score=101.14 Aligned_cols=98 Identities=16% Similarity=0.200 Sum_probs=70.8
Q ss_pred eEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCCC--cccccccccccCCCCCcc---cccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGIP--AYLGVLGTKRLPYPSRSF---ELAHCSRC 287 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~~--~~~~~~d~~~lpf~~~sF---DlV~~s~~ 287 (617)
.+|||+|||+|.++..++.. .|+++|+++.++..++. .+...++. +.+..+|... +++ ++| |+|+++--
T Consensus 125 ~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~-n~~~~~l~~~v~~~~~D~~~-~~~-~~f~~~D~IvsnPP 201 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARK-NAERHGVSDRFFVRKGEFLE-PFK-EKFASIEMILSNPP 201 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHH-HHHHTTCTTSEEEEESSTTG-GGG-GGTTTCCEEEECCC
T ss_pred CEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCceEEEECcchh-hcc-cccCCCCEEEEcCC
Confidence 58999999999999888765 68999999988888774 44445553 7778888765 233 579 99998621
Q ss_pred ccc----------cc--------cccceEEEEec-ccccCCceeeecC
Q 007128 288 RID----------WL--------QRDGILLLELD-RLLRPGGYFAYSS 316 (617)
Q Consensus 288 l~h----------~~--------~~~~~~L~el~-RvLrPGG~lvis~ 316 (617)
.+. +. .+...+++++. +.|+|||++++..
T Consensus 202 yi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 202 YVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp CBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred CCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 110 10 11124788899 9999999999864
No 361
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.42 E-value=1.4e-09 Score=107.92 Aligned_cols=95 Identities=16% Similarity=0.247 Sum_probs=67.3
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----ccccchhhhhhhccc--CCcchhhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWCEAYST--YPRTYDLLHAWTVFSD 532 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~e~~~~--~p~tfDlvh~~~~~~~ 532 (617)
.+|||+|||+|.++..|++.+. .|+.+|. +.+++.+.++ |+-..+...+.++.. -+.+||+|.++..+.+
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~ 156 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTGM---RVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWGG 156 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCSS
T ss_pred CEEEECccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcCC
Confidence 3699999999999999999875 5667774 5777666554 321112111112111 2389999999988887
Q ss_pred hhhcCCCcccchhhccccccCcceEEEec
Q 007128 533 IEKRGCSGEDLLLEMDRILRPTGFVIIRD 561 (617)
Q Consensus 533 ~~~~~c~~~~~l~Em~RiLrPgG~~ii~~ 561 (617)
.. +....+.|+.|+|||||++++..
T Consensus 157 ~~----~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 157 PD----YATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp GG----GGGSSSBCTTTSCSSCHHHHHHH
T ss_pred cc----hhhhHHHHHHhhcCCcceeHHHH
Confidence 65 44568899999999999987765
No 362
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.41 E-value=1e-08 Score=104.94 Aligned_cols=111 Identities=11% Similarity=0.181 Sum_probs=79.6
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----ccccchhhhhhhcccC--Ccchhhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWCEAYSTY--PRTYDLLHAWTVFSD 532 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~e~~~~~--p~tfDlvh~~~~~~~ 532 (617)
..|||+|||+|+|+..+++.+.. .|+.+|. +.+++.|.++ |+-..+...+.+...+ +++||+|.++..
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p--- 201 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV--- 201 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC---
T ss_pred CEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCc---
Confidence 36999999999999999987653 4777774 5777766554 3321122222332223 489999987433
Q ss_pred hhhcCCCcccchhhccccccCcceEEEecCh-------hHHHHHHHhhhhccccc
Q 007128 533 IEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ-------SVVDFVKKYLRALNWEA 580 (617)
Q Consensus 533 ~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~-------~~~~~~~~~~~~~~w~~ 580 (617)
.+...++.++.|+|||||++++.+.. ...+++.+.+...+|+.
T Consensus 202 -----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~ 251 (278)
T 2frn_A 202 -----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDV 251 (278)
T ss_dssp -----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEE
T ss_pred -----hhHHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCee
Confidence 24467999999999999999996654 35678899999999987
No 363
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.40 E-value=2.4e-08 Score=96.50 Aligned_cols=92 Identities=13% Similarity=0.047 Sum_probs=64.1
Q ss_pred eeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCC-----------CCcccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYP-----------SRSFEL 281 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~-----------~~sFDl 281 (617)
+.+|||+|||+|.++..++++ .|+|+|+++... ..++.+.++|+...+.. .++||+
T Consensus 26 g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~-----------~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~ 94 (191)
T 3dou_A 26 GDAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEE-----------IAGVRFIRCDIFKETIFDDIDRALREEGIEKVDD 94 (191)
T ss_dssp TCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCC-----------CTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEE
T ss_pred CCEEEEEeecCCHHHHHHHHcCCcEEEEecccccc-----------CCCeEEEEccccCHHHHHHHHHHhhcccCCcceE
Confidence 368999999999999999875 589999988421 12456777787665421 148999
Q ss_pred ccccccc----cccccc------cceEEEEecccccCCceeeecCh
Q 007128 282 AHCSRCR----IDWLQR------DGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 282 V~~s~~l----~h~~~~------~~~~L~el~RvLrPGG~lvis~p 317 (617)
|+|.... .+..+. ...++.++.++|||||.|++..+
T Consensus 95 Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 95 VVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp EEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 9985321 111111 13478888999999999998654
No 364
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.40 E-value=9.1e-09 Score=105.49 Aligned_cols=97 Identities=10% Similarity=-0.013 Sum_probs=55.5
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCCCCceEEEeecccc----c-chhhh--hhhcccCC-cchhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDGPNTLKLIYDRGLI----G-SIHNW--CEAYSTYP-RTYDLLHAWTVFS 531 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~~~~l~~~~~rgl~----~-~~~~~--~e~~~~~p-~tfDlvh~~~~~~ 531 (617)
..|||+|||+|+++..|+++ . .|+.+|...|+..+.++.+. + .+... ..++..+| ++||+|.|+..+.
T Consensus 84 ~~VLDlGcGtG~~s~~la~~-~---~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~Vvsd~~~~ 159 (276)
T 2wa2_A 84 GTVVDLGCGRGSWSYYAASQ-P---NVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKMEPFQADTVLCDIGES 159 (276)
T ss_dssp EEEEEESCTTCHHHHHHHTS-T---TEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCCCCCCSEEEECCCCC
T ss_pred CEEEEeccCCCHHHHHHHHc-C---CEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCCCCCcCEEEECCCcC
Confidence 36999999999999999987 3 34444432232222112110 0 11111 12333344 8999999876521
Q ss_pred hhhhcCCCc---ccchhhccccccCcc--eEEEec
Q 007128 532 DIEKRGCSG---EDLLLEMDRILRPTG--FVIIRD 561 (617)
Q Consensus 532 ~~~~~~c~~---~~~l~Em~RiLrPgG--~~ii~~ 561 (617)
...+.-+. ..+|.++.|+||||| .|++..
T Consensus 160 -~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 160 -NPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp -CSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred -CCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 10000000 137899999999999 998854
No 365
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.40 E-value=1.6e-08 Score=108.71 Aligned_cols=103 Identities=18% Similarity=0.035 Sum_probs=73.2
Q ss_pred eeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCccccccccccc-CCCCCccccccccccccc-
Q 007128 215 LRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRL-PYPSRSFELAHCSRCRID- 290 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~l-pf~~~sFDlV~~s~~l~h- 290 (617)
+.+|||+|||+|.++..++.. .|+++|+++.+++.++ +.+...++...+.++|+..+ +...+.||+|++.--.+.
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~-~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~ 293 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLD-QAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLVK 293 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCCS
T ss_pred CCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHH-HHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCCC
Confidence 368999999999999998865 4999999999988887 44555566656667776654 222344999997532111
Q ss_pred -------cccccceEEEEecccccCCceeeecChh
Q 007128 291 -------WLQRDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 291 -------~~~~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
.......++.++.++|+|||++++.+..
T Consensus 294 ~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 294 RPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp SGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 1112235788889999999999975433
No 366
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.39 E-value=6.5e-08 Score=93.41 Aligned_cols=116 Identities=11% Similarity=0.003 Sum_probs=78.1
Q ss_pred eeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCcccccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDW 291 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~ 291 (617)
+.+|||+|||+|.++..+++. .|+++|+++.++..++. .+...++++.+..+|+..++ ++||+|+++......
T Consensus 50 ~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~-~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~ 125 (207)
T 1wy7_A 50 GKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIE-NLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFGSQ 125 (207)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHH-HTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCSSS
T ss_pred cCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHH-HHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCccc
Confidence 368999999999999988765 48999999988777663 33344557788888888764 489999987653333
Q ss_pred cc-ccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhh
Q 007128 292 LQ-RDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRI 344 (617)
Q Consensus 292 ~~-~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~ 344 (617)
.. ....++.++.++| ||.+++... .+. ..+.+.+.++..||+.
T Consensus 126 ~~~~~~~~l~~~~~~l--~~~~~~~~~-----~~~---~~~~~~~~l~~~g~~~ 169 (207)
T 1wy7_A 126 RKHADRPFLLKAFEIS--DVVYSIHLA-----KPE---VRRFIEKFSWEHGFVV 169 (207)
T ss_dssp STTTTHHHHHHHHHHC--SEEEEEEEC-----CHH---HHHHHHHHHHHTTEEE
T ss_pred cCCchHHHHHHHHHhc--CcEEEEEeC-----CcC---CHHHHHHHHHHCCCeE
Confidence 21 1134677788888 555444310 111 1245666777888754
No 367
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.39 E-value=9.6e-09 Score=102.13 Aligned_cols=96 Identities=14% Similarity=0.235 Sum_probs=69.0
Q ss_pred eEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCCC--cccccccccc-cC--------------
Q 007128 216 RTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGIP--AYLGVLGTKR-LP-------------- 273 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~~--~~~~~~d~~~-lp-------------- 273 (617)
.+|||||||+|.++..|++. .|+++|+++..+..++... ...+.. +.+..+|... ++
T Consensus 62 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 140 (239)
T 2hnk_A 62 KRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYW-KENGLENKIFLKLGSALETLQVLIDSKSAPSWASD 140 (239)
T ss_dssp SEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHH-HHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTT
T ss_pred CEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCCEEEEECCHHHHHHHHHhhccccccccc
Confidence 58999999999998888754 5899999998777766433 333432 5566666543 12
Q ss_pred CCC--CccccccccccccccccccceEEEEecccccCCceeeecC
Q 007128 274 YPS--RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 274 f~~--~sFDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~ 316 (617)
|++ ++||+|++.... .....++.++.++|+|||++++..
T Consensus 141 f~~~~~~fD~I~~~~~~----~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 141 FAFGPSSIDLFFLDADK----ENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TCCSTTCEEEEEECSCG----GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccCCCCCcCEEEEeCCH----HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 333 789999976432 222457899999999999999965
No 368
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.39 E-value=4.7e-08 Score=103.98 Aligned_cols=120 Identities=15% Similarity=0.119 Sum_probs=80.2
Q ss_pred ccchhhHHHhhhcchhhHhhhcCC--ceEEEEeecCCCCCceEEEeeccccc-chhhhhhhcccCCcchhhhhhhhhhhh
Q 007128 456 SNSLRNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDGPNTLKLIYDRGLIG-SIHNWCEAYSTYPRTYDLLHAWTVFSD 532 (617)
Q Consensus 456 ~~~~r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~~~~l~~~~~rgl~~-~~~~~~e~~~~~p~tfDlvh~~~~~~~ 532 (617)
......|||+|||+|.++..|+++ ++. ++.+|.+.+++.+.++.-+. ..+|..++ +|.. |+|++..++++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~---~~~~D~~~~~~~a~~~~~v~~~~~d~~~~---~p~~-D~v~~~~vlh~ 273 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSIN---AINFDLPHVIQDAPAFSGVEHLGGDMFDG---VPKG-DAIFIKWICHD 273 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCE---EEEEECHHHHTTCCCCTTEEEEECCTTTC---CCCC-SEEEEESCGGG
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCE---EEEEehHHHHHhhhhcCCCEEEecCCCCC---CCCC-CEEEEechhhc
Confidence 455678999999999999999874 443 33334345555444432111 12233233 4544 99999999987
Q ss_pred hhhcCCCcccchhhccccccCcceEEEecChh------------------------------HHHHHHHhhhhccccccc
Q 007128 533 IEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS------------------------------VVDFVKKYLRALNWEAVA 582 (617)
Q Consensus 533 ~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~------------------------------~~~~~~~~~~~~~w~~~~ 582 (617)
.... +...+|.++.|+|||||+|+|.|..- ..+++++++++.+++.+
T Consensus 274 ~~~~--~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v- 350 (368)
T 3reo_A 274 WSDE--HCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGF- 350 (368)
T ss_dssp BCHH--HHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEE-
T ss_pred CCHH--HHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCeee-
Confidence 6533 33579999999999999999976431 13457788888888876
Q ss_pred ccc
Q 007128 583 TTA 585 (617)
Q Consensus 583 ~~~ 585 (617)
++.
T Consensus 351 ~~~ 353 (368)
T 3reo_A 351 KVA 353 (368)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 369
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.39 E-value=4.6e-08 Score=97.72 Aligned_cols=108 Identities=16% Similarity=0.189 Sum_probs=76.6
Q ss_pred hhHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CCceEEEeec----ccc---cch-hhhhhhcccCCcchhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PNTLKLIYDR----GLI---GSI-HNWCEAYSTYPRTYDLLHAW 527 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~~l~~~~~r----gl~---~~~-~~~~e~~~~~p~tfDlvh~~ 527 (617)
.+|||+|||+|.++..|++. +. .|+.+|. +.+++.|.++ |+- -.+ .|..+.++. .+||+|.++
T Consensus 95 ~~vldiG~G~G~~~~~l~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~D~v~~~ 169 (255)
T 3mb5_A 95 DFIVEAGVGSGALTLFLANIVGPEG---RVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEE--ENVDHVILD 169 (255)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCC--CSEEEEEEC
T ss_pred CEEEEecCCchHHHHHHHHHhCCCe---EEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCC--CCcCEEEEC
Confidence 46999999999999999886 45 4666664 5777766655 431 111 133333222 789999872
Q ss_pred hhhhhhhhcCCCcccchhhccccccCcceEEEecC-hhHHHHHHHhhhhcc--cccc
Q 007128 528 TVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDK-QSVVDFVKKYLRALN--WEAV 581 (617)
Q Consensus 528 ~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~-~~~~~~~~~~~~~~~--w~~~ 581 (617)
. .+...++.++.|+|||||.+++..+ .....++.+.++..+ |..+
T Consensus 170 -----~----~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~~ 217 (255)
T 3mb5_A 170 -----L----PQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMKP 217 (255)
T ss_dssp -----S----SCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSCC
T ss_pred -----C----CCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcccc
Confidence 2 2567899999999999999998875 446667788888777 7654
No 370
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.39 E-value=5.5e-08 Score=98.12 Aligned_cols=125 Identities=9% Similarity=0.036 Sum_probs=85.4
Q ss_pred eeEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccccccccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRID 290 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h 290 (617)
..+|||||||+|-++..++.. .|+++|+++.+++.+. +++...|++..+.+.|...-+ +.+.||+|++.-++ |
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~-~~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lkti-~ 209 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVD-EALTRLNVPHRTNVADLLEDR-LDEPADVTLLLKTL-P 209 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHH-HHHHHTTCCEEEEECCTTTSC-CCSCCSEEEETTCH-H
T ss_pred CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHH-HHHHhcCCCceEEEeeecccC-CCCCcchHHHHHHH-H
Confidence 468999999999999888654 6999999999888877 445556788888887766555 45789999988764 5
Q ss_pred ccccc-ceEEEEecccccCCceeeecCh-hhhcCCHHHHHHH-HHHHHHHHHhhh
Q 007128 291 WLQRD-GILLLELDRLLRPGGYFAYSSP-EAYAQDEEDLRIW-KEMSALVERMCW 342 (617)
Q Consensus 291 ~~~~~-~~~L~el~RvLrPGG~lvis~p-~~~~~~~~~~~~w-~~l~~l~~~~gf 342 (617)
+.++. ...+-++.+.|+|+|.++--.. ............| +.+++.+...||
T Consensus 210 ~Le~q~kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~ 264 (281)
T 3lcv_B 210 CLETQQRGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSC 264 (281)
T ss_dssp HHHHHSTTHHHHHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTC
T ss_pred HhhhhhhHHHHHHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCC
Confidence 54442 2233399999999998875311 0111222222223 567778888888
No 371
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.39 E-value=8.1e-08 Score=98.44 Aligned_cols=151 Identities=10% Similarity=0.069 Sum_probs=96.2
Q ss_pred CceeecCCCCccccCchhhHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc---hhhhhccCCCccchhh
Q 007128 175 GEKIIFPGGGTHFHYGADKYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQ 251 (617)
Q Consensus 175 ~~~~~Fpgg~~~F~~~a~~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~ 251 (617)
|-.+.|.-...+|..+-..-...+.+.+. . +.+|||+|||+|.++..++.+ .|+++|+++..+..++
T Consensus 96 G~~~~~D~~k~~f~~~~~~er~ri~~~~~--------~--g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~ 165 (278)
T 3k6r_A 96 GIKYKLDVAKIMFSPANVKERVRMAKVAK--------P--DELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLV 165 (278)
T ss_dssp TEEEEEETTTSCCCGGGHHHHHHHHHHCC--------T--TCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHH
T ss_pred CEEEEEeccceEEcCCcHHHHHHHHHhcC--------C--CCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHH
Confidence 44444444455665554433334444432 2 368999999999999888765 4899999998777766
Q ss_pred hHHHHHhCCC--cccccccccccCCCCCccccccccccccccccccceEEEEecccccCCceeeecChhhhcCCHHHHHH
Q 007128 252 IQFALERGIP--AYLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRI 329 (617)
Q Consensus 252 ~~~a~~rg~~--~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~ 329 (617)
+.+..+++. +.+..+|+..++. .+.||.|++..- .....+|..+.++|+|||++.+........... ..
T Consensus 166 -~N~~~N~v~~~v~~~~~D~~~~~~-~~~~D~Vi~~~p-----~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~--~~ 236 (278)
T 3k6r_A 166 -ENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV-----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPR--EP 236 (278)
T ss_dssp -HHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC-----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTT--TT
T ss_pred -HHHHHcCCCCcEEEEeCcHHHhcc-ccCCCEEEECCC-----CcHHHHHHHHHHHcCCCCEEEEEeeecccccch--hH
Confidence 455555654 5667788877663 478999986521 122346777889999999987643222111111 11
Q ss_pred HHHHHHHHHHhhhhh
Q 007128 330 WKEMSALVERMCWRI 344 (617)
Q Consensus 330 w~~l~~l~~~~gf~~ 344 (617)
.+.++++++..|++.
T Consensus 237 ~e~i~~~~~~~g~~v 251 (278)
T 3k6r_A 237 FETFKRITKEYGYDV 251 (278)
T ss_dssp HHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHcCCcE
Confidence 356677778888754
No 372
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.38 E-value=1.2e-08 Score=107.98 Aligned_cols=140 Identities=11% Similarity=0.060 Sum_probs=92.8
Q ss_pred cCccchhhHHHhhhcchhhHhhhcCC--ceEEEEeecCCCCCceEEEeec---ccccchhhhhhhcc-cCCcchhhhhhh
Q 007128 454 IQSNSLRNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDGPNTLKLIYDR---GLIGSIHNWCEAYS-TYPRTYDLLHAW 527 (617)
Q Consensus 454 i~~~~~r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~~~~l~~~~~r---gl~~~~~~~~e~~~-~~p~tfDlvh~~ 527 (617)
++++..+.|+|+|||+|.++.+|+++ ++ .++-.|.+.+++.|.++ +....+....-+|- .-+..+|++.+.
T Consensus 175 ~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~---~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~~~D~~~~~ 251 (353)
T 4a6d_A 175 FDLSVFPLMCDLGGGAGALAKECMSLYPGC---KITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILA 251 (353)
T ss_dssp SCGGGCSEEEEETCTTSHHHHHHHHHCSSC---EEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTSCCCCCSEEEEE
T ss_pred cCcccCCeEEeeCCCCCHHHHHHHHhCCCc---eeEeccCHHHHHHHHHhhhhcccCceeeecCccccCCCCCceEEEee
Confidence 56778889999999999999999875 33 22333444444443322 11111111111121 112568999999
Q ss_pred hhhhhhhhcCCCcccchhhccccccCcceEEEecChh--------------------------HHHHHHHhhhhcccccc
Q 007128 528 TVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS--------------------------VVDFVKKYLRALNWEAV 581 (617)
Q Consensus 528 ~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~--------------------------~~~~~~~~~~~~~w~~~ 581 (617)
.++++..+. +...+|.++.|.|+|||.|+|.|..- ..++.++++++.+|+.+
T Consensus 252 ~vlh~~~d~--~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v 329 (353)
T 4a6d_A 252 RVLHDWADG--KCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDF 329 (353)
T ss_dssp SSGGGSCHH--HHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEE
T ss_pred eecccCCHH--HHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceE
Confidence 999876533 23578999999999999999988631 14578899999999987
Q ss_pred cccccCCCCCCCCCCeEEEEEEec
Q 007128 582 ATTADASSDSDKDGDEVVFIVQKK 605 (617)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~l~~~K~ 605 (617)
++.. . .....+++|+|.
T Consensus 330 -~v~~--~----~~~~~~i~ArKg 346 (353)
T 4a6d_A 330 -QFKK--T----GAIYDAILARKG 346 (353)
T ss_dssp -EEEC--C----SSSCEEEEEECC
T ss_pred -EEEE--c----CCceEEEEEEec
Confidence 6654 2 235678999994
No 373
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.38 E-value=1.3e-08 Score=99.31 Aligned_cols=118 Identities=15% Similarity=0.179 Sum_probs=76.4
Q ss_pred hHHHhhhcchhhHhhhcCC--ceEEEEeecCCC-CCceEEEeec----cc--ccchhhhhhhccc-CC-cchhhhhhhhh
Q 007128 461 NLMDMKAHLGSFAAALKEK--DVWVMSVVPEDG-PNTLKLIYDR----GL--IGSIHNWCEAYST-YP-RTYDLLHAWTV 529 (617)
Q Consensus 461 ~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~-~~~l~~~~~r----gl--~~~~~~~~e~~~~-~p-~tfDlvh~~~~ 529 (617)
.|||+|||+|.++..|++. +. +|+.+|. +.+++.|.++ |+ +-.++.-.+.++. ++ ++||+|+++..
T Consensus 44 ~vLDiGcG~G~~~~~la~~~p~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 44 IHVEVGSGKGAFVSGMAKQNPDI---NYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp EEEEESCTTSHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred eEEEEccCcCHHHHHHHHHCCCC---CEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 5999999999999999875 34 5666664 5666665543 22 1111111122321 33 88999998633
Q ss_pred hhhh----hhcCCCcccchhhccccccCcceEEEec-ChhHHHHHHHhhhhcccccc
Q 007128 530 FSDI----EKRGCSGEDLLLEMDRILRPTGFVIIRD-KQSVVDFVKKYLRALNWEAV 581 (617)
Q Consensus 530 ~~~~----~~~~c~~~~~l~Em~RiLrPgG~~ii~~-~~~~~~~~~~~~~~~~w~~~ 581 (617)
.++. +..+-....+|.++.|+|||||.+++.. .....+.+.+++...+|+.+
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~ 177 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLN 177 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEE
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeee
Confidence 2210 0011123579999999999999999876 44566778888888888764
No 374
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.38 E-value=1.1e-08 Score=104.64 Aligned_cols=101 Identities=10% Similarity=0.060 Sum_probs=71.8
Q ss_pred chhhHHHhhhcc---hhhHhhhcCC--ceEEEEeecCCC-CCceEEEeecc--------cccchhhh--hhhc----ccC
Q 007128 458 SLRNLMDMKAHL---GSFAAALKEK--DVWVMSVVPEDG-PNTLKLIYDRG--------LIGSIHNW--CEAY----STY 517 (617)
Q Consensus 458 ~~r~vLD~g~G~---G~fa~~L~~~--~~~v~~v~~~~~-~~~l~~~~~rg--------l~~~~~~~--~e~~----~~~ 517 (617)
.++.|||+|||+ |.++..+.+. +. .|+.+|. +.|++.+.++- +.+.+.+. .... ..+
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~---~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDA---RVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTC---EEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCC---EEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccC
Confidence 567899999999 9987766542 34 5666774 67877776552 12333221 1000 124
Q ss_pred C-cchhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecCh
Q 007128 518 P-RTYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 518 p-~tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
| .+||+|.+..+|+|+... +...+|.|+.|+|||||+|+|.+..
T Consensus 154 d~~~~d~v~~~~vlh~~~d~--~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 154 DFSRPAAIMLVGMLHYLSPD--VVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp CTTSCCEEEETTTGGGSCTT--THHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred CCCCCEEEEEechhhhCCcH--HHHHHHHHHHHhCCCCcEEEEEEec
Confidence 4 689999999999988733 5889999999999999999999865
No 375
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.37 E-value=1.5e-08 Score=108.32 Aligned_cols=115 Identities=17% Similarity=0.176 Sum_probs=73.5
Q ss_pred HHHHHhhccccCccchhhHHHhhhcchhhHhhhcCCceEEEEeecCCCCCceEEEeec----cc---ccchhhhhhhccc
Q 007128 444 DSYWNLLSPKIQSNSLRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDGPNTLKLIYDR----GL---IGSIHNWCEAYST 516 (617)
Q Consensus 444 ~~y~~~l~~~i~~~~~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~~~~l~~~~~r----gl---~~~~~~~~e~~~~ 516 (617)
..|.+.|........-.+|||+|||+|.++..|++.+.. .|+.+|..+|++.|.++ |+ +-.++.-.+.++
T Consensus 49 ~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~--~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~- 125 (376)
T 3r0q_C 49 DAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGAR--KVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDIS- 125 (376)
T ss_dssp HHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCS--EEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCC-
T ss_pred HHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCC--EEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcC-
Confidence 345555433232333356999999999999999988651 45555533666665544 33 222222223332
Q ss_pred CCcchhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecC
Q 007128 517 YPRTYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDK 562 (617)
Q Consensus 517 ~p~tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~ 562 (617)
+|++||+|++..+...+. +.-.+..++.+++|+|||||.+++.+.
T Consensus 126 ~~~~~D~Iv~~~~~~~l~-~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 126 LPEKVDVIISEWMGYFLL-RESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp CSSCEEEEEECCCBTTBT-TTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred cCCcceEEEEcChhhccc-chHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 458999999865444332 334677899999999999999987654
No 376
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.37 E-value=1.4e-08 Score=100.33 Aligned_cols=129 Identities=17% Similarity=0.250 Sum_probs=77.3
Q ss_pred hhHHHhhhcchhhHhhhcCC-c-eEEEEeecCCC-CCceEEEeecc-----cccchhhhhhh--cccCCcchhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK-D-VWVMSVVPEDG-PNTLKLIYDRG-----LIGSIHNWCEA--YSTYPRTYDLLHAWTV 529 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~-~-~~v~~v~~~~~-~~~l~~~~~rg-----l~~~~~~~~e~--~~~~p~tfDlvh~~~~ 529 (617)
.+|||+|||+|.++..|++. + . .|+.+|. +.+++.+.++. +.-...+...+ +..++.+||+|.+
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~--- 149 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIADKG---IVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYE--- 149 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTTTS---EEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEE---
T ss_pred CEEEEEcccCCHHHHHHHHHcCCc---EEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEE---
Confidence 46999999999999999876 3 3 3555553 45554433321 10001111111 0123378999872
Q ss_pred hhhhhhcCCCc---ccchhhccccccCcceEEEe----cChh-------HHHHHHHhhhhcccccccccccCCCCCCCCC
Q 007128 530 FSDIEKRGCSG---EDLLLEMDRILRPTGFVIIR----DKQS-------VVDFVKKYLRALNWEAVATTADASSDSDKDG 595 (617)
Q Consensus 530 ~~~~~~~~c~~---~~~l~Em~RiLrPgG~~ii~----~~~~-------~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 595 (617)
++. +. ..+|.++.|+|||||.+++. .... ..++++ ++...+++.+ ...+ .++. ..
T Consensus 150 --~~~----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~-~~~~--~~~~-~~ 218 (230)
T 1fbn_A 150 --DVA----QPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIV-DEVD--IEPF-EK 218 (230)
T ss_dssp --CCC----STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEE-EEEE--CTTT-ST
T ss_pred --ecC----ChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEE-EEEc--cCCC-cc
Confidence 121 23 56799999999999999994 1111 225677 7788888875 4444 3332 23
Q ss_pred CeEEEEEEec
Q 007128 596 DEVVFIVQKK 605 (617)
Q Consensus 596 ~~~~l~~~K~ 605 (617)
+-.+++++|+
T Consensus 219 ~~~~v~~~k~ 228 (230)
T 1fbn_A 219 DHVMFVGIWE 228 (230)
T ss_dssp TEEEEEEEEC
T ss_pred ceEEEEEEeC
Confidence 4678888874
No 377
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.37 E-value=4.2e-09 Score=99.44 Aligned_cols=87 Identities=16% Similarity=0.200 Sum_probs=62.6
Q ss_pred cchhhhhhhhhhhhh-hhcCCCcccchhhccccccCcceEEEecChhH----------HHHHHHhhhhcccccccccccC
Q 007128 519 RTYDLLHAWTVFSDI-EKRGCSGEDLLLEMDRILRPTGFVIIRDKQSV----------VDFVKKYLRALNWEAVATTADA 587 (617)
Q Consensus 519 ~tfDlvh~~~~~~~~-~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~~----------~~~~~~~~~~~~w~~~~~~~~~ 587 (617)
++||+|+|..+++|+ . ++..+|.|+.|+|||||++++.++... .+++.+.++..++ . .+.+.
T Consensus 62 ~~fD~V~~~~~l~~~~~----~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i--~~~~~ 134 (176)
T 2ld4_A 62 SSFDIILSGLVPGSTTL----HSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-V--EVKEL 134 (176)
T ss_dssp SCEEEEEECCSTTCCCC----CCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-E--EEEEE
T ss_pred CCEeEEEECChhhhccc----CHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-c--EeecC
Confidence 899999999999977 4 679999999999999999999765321 5778888888888 3 22211
Q ss_pred CC---CC----------CCC---CCeEEEEEEecccccCCC
Q 007128 588 SS---DS----------DKD---GDEVVFIVQKKIWLTSES 612 (617)
Q Consensus 588 ~~---~~----------~~~---~~~~~l~~~K~~w~~~~~ 612 (617)
.. .+ +.. ..-.+++|+|+-|...-|
T Consensus 135 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~Kp~~~~gs~ 175 (176)
T 2ld4_A 135 QREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSS 175 (176)
T ss_dssp EEECCCHHHHHHHHHHTCCCCSSEEEEEEEEECCCSSCCSC
T ss_pred cccCCCHHHHHHHHHHhcccCCceEEEEEeccCCcccccCC
Confidence 00 00 001 125688999988865544
No 378
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.37 E-value=9.7e-09 Score=108.57 Aligned_cols=97 Identities=13% Similarity=0.126 Sum_probs=66.2
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCCCCceEEEeec----cc---ccchhhhhhhcccCC-cchhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDGPNTLKLIYDR----GL---IGSIHNWCEAYSTYP-RTYDLLHAWTVFS 531 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~~~~l~~~~~r----gl---~~~~~~~~e~~~~~p-~tfDlvh~~~~~~ 531 (617)
.+|||+|||+|.++..|++.+. ..|+.+|..++++.|.++ |+ +..++.-.+.++ +| ++||+|++..+..
T Consensus 68 ~~VLDvGcG~G~~~~~la~~g~--~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~Iis~~~~~ 144 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKAGA--RKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVE-LPVEKVDIIISEWMGY 144 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHTTC--SEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCC-CSSSCEEEEEECCCBB
T ss_pred CEEEEEeccchHHHHHHHHCCC--CEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHcc-CCCCceEEEEEccccc
Confidence 4699999999999999998865 134555543466666554 33 222222223332 45 8999999876544
Q ss_pred hhhhcCCCcccchhhccccccCcceEEEe
Q 007128 532 DIEKRGCSGEDLLLEMDRILRPTGFVIIR 560 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~RiLrPgG~~ii~ 560 (617)
++. +..++..++.+++|+|||||.++..
T Consensus 145 ~l~-~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 145 CLF-YESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp TBT-BTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ccc-CchhHHHHHHHHHHhCCCCCEEccc
Confidence 442 3447788999999999999998743
No 379
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.37 E-value=2.1e-08 Score=99.44 Aligned_cols=92 Identities=14% Similarity=0.306 Sum_probs=63.1
Q ss_pred hhhHHHhhhcchhhHhhhcC--CceEEEEeecCCC-CCceEEEeec----cc---ccchh-hhhhhcc-cCCcchhhhhh
Q 007128 459 LRNLMDMKAHLGSFAAALKE--KDVWVMSVVPEDG-PNTLKLIYDR----GL---IGSIH-NWCEAYS-TYPRTYDLLHA 526 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~--~~~~v~~v~~~~~-~~~l~~~~~r----gl---~~~~~-~~~e~~~-~~p~tfDlvh~ 526 (617)
-.+|||+|||+|.++..|++ .+. .|+.+|. +.+++.|.++ |+ +-.++ +..+.++ ..+.+||+|++
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 148 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDI---HVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFI 148 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTC---EEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEE
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEE
Confidence 34799999999999999998 444 5666664 5666666543 32 11222 2222233 33589999987
Q ss_pred hhhhhhhhhcCCCcccchhhccccccCcceEEEe
Q 007128 527 WTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIR 560 (617)
Q Consensus 527 ~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~ 560 (617)
+.... +...++.++.|+|||||++++.
T Consensus 149 ~~~~~-------~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 149 DAAKA-------QSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp ETTSS-------SHHHHHHHHGGGEEEEEEEEEE
T ss_pred cCcHH-------HHHHHHHHHHHhcCCCeEEEEe
Confidence 54332 4567999999999999999993
No 380
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.36 E-value=2.7e-08 Score=109.67 Aligned_cols=121 Identities=17% Similarity=0.135 Sum_probs=82.0
Q ss_pred ceeEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCC-CcccccccccccCC-CCCcccccccc-
Q 007128 214 RLRTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRLPY-PSRSFELAHCS- 285 (617)
Q Consensus 214 ~~~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~lpf-~~~sFDlV~~s- 285 (617)
++.+|||+|||+|..+..|++. .|+++|+++.++..++. .+...++ ++.+...|...++. .+++||+|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~-n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHA-NISRCGISNVALTHFDGRVFGAAVPEMFDAILLDA 195 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHH-HHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECC
Confidence 3478999999999998888763 48999999988877764 3444455 57777888877764 45789999862
Q ss_pred ----ccccccccc----------------cceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHh
Q 007128 286 ----RCRIDWLQR----------------DGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERM 340 (617)
Q Consensus 286 ----~~l~h~~~~----------------~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~ 340 (617)
...+...++ ...+|.++.++|||||+|++++-...+...+ +.+..++++.
T Consensus 196 PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene-----~vv~~~l~~~ 265 (479)
T 2frx_A 196 PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENE-----AVCLWLKETY 265 (479)
T ss_dssp CCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTH-----HHHHHHHHHS
T ss_pred CcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCH-----HHHHHHHHHC
Confidence 111111111 1246888999999999999986554433322 2345555544
No 381
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.36 E-value=3.1e-08 Score=106.38 Aligned_cols=123 Identities=12% Similarity=0.038 Sum_probs=82.5
Q ss_pred eEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCC---CcccccccccccCC----CCCcccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGI---PAYLGVLGTKRLPY----PSRSFELAHCS 285 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~---~~~~~~~d~~~lpf----~~~sFDlV~~s 285 (617)
.+|||+|||+|.++..++.. .|+++|+++.++..++ +.+...++ ++.+..+|+..+.. ..++||+|++.
T Consensus 222 ~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~-~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~d 300 (396)
T 3c0k_A 222 KRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIAR-QNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMD 300 (396)
T ss_dssp CEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHH-HHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHH-HHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEEC
Confidence 58999999999999999875 5899999998888777 34455566 57788888765421 14689999975
Q ss_pred cccc--------ccccccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhh
Q 007128 286 RCRI--------DWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCW 342 (617)
Q Consensus 286 ~~l~--------h~~~~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf 342 (617)
--.. +.......++.++.++|+|||+++++.......... ..+.+.+.+...|+
T Consensus 301 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~---~~~~i~~~~~~~g~ 362 (396)
T 3c0k_A 301 PPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDL---FQKIIADAAIDAGR 362 (396)
T ss_dssp CSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHH---HHHHHHHHHHHHTC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHH---HHHHHHHHHHHcCC
Confidence 3211 111222357788999999999999975443222111 11334445666654
No 382
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.36 E-value=9.5e-09 Score=100.96 Aligned_cols=96 Identities=17% Similarity=0.128 Sum_probs=69.2
Q ss_pred eEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCC--Cccccccccccc-C-CCC----Cccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRL-P-YPS----RSFELA 282 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~l-p-f~~----~sFDlV 282 (617)
.+|||||||+|.++..+++. .|+++|+++.++..++. .....++ ++.+..+|+... + +++ ++||+|
T Consensus 71 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~-~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v 149 (229)
T 2avd_A 71 KKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRP-LWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVA 149 (229)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHH-HHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEE
Confidence 58999999999998888763 58999999988877764 3334444 466766665432 1 211 689999
Q ss_pred cccccccccccccceEEEEecccccCCceeeecC
Q 007128 283 HCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 283 ~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~ 316 (617)
++... ......++.++.++|+|||++++..
T Consensus 150 ~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 150 VVDAD----KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp EECSC----STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCC----HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 97543 1222457889999999999999954
No 383
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.35 E-value=6.4e-09 Score=99.44 Aligned_cols=99 Identities=13% Similarity=0.120 Sum_probs=67.9
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc--ccchh-hhhhhcccC-Ccchhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL--IGSIH-NWCEAYSTY-PRTYDLLHAWTVF 530 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl--~~~~~-~~~e~~~~~-p~tfDlvh~~~~~ 530 (617)
.+|||+|||+|.++..+++++.. .|+.+|. +.+++.|.++ |+ +-.++ |..+....+ +++||+|.++..|
T Consensus 46 ~~vLDlgcG~G~~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~ 123 (189)
T 3p9n_A 46 LAVLDLYAGSGALGLEALSRGAA--SVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPY 123 (189)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS--EEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCT
T ss_pred CEEEEeCCCcCHHHHHHHHCCCC--eEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCC
Confidence 36999999999999988776542 4666664 5777666554 32 11222 222212223 3899999998777
Q ss_pred hhhhhcCCCcccchhhccc--cccCcceEEEecCh
Q 007128 531 SDIEKRGCSGEDLLLEMDR--ILRPTGFVIIRDKQ 563 (617)
Q Consensus 531 ~~~~~~~c~~~~~l~Em~R--iLrPgG~~ii~~~~ 563 (617)
.+.. .++..++.++.| +|||||.+++....
T Consensus 124 ~~~~---~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 124 NVDS---ADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp TSCH---HHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred Ccch---hhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 6431 156789999998 99999999998764
No 384
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.34 E-value=2.1e-08 Score=100.25 Aligned_cols=124 Identities=16% Similarity=0.062 Sum_probs=74.8
Q ss_pred hHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEe----ecccc-cchhhhhh--hcccCCcchhhhhhhhhhhh
Q 007128 461 NLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIY----DRGLI-GSIHNWCE--AYSTYPRTYDLLHAWTVFSD 532 (617)
Q Consensus 461 ~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~----~rgl~-~~~~~~~e--~~~~~p~tfDlvh~~~~~~~ 532 (617)
+|||+|||+|.++..|++.-.--..|..+|. +.|++.+. +++.+ .+..+-+. ..+..+.++|+|++...++
T Consensus 80 ~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~~~~- 158 (233)
T 4df3_A 80 RILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYADVAQP- 158 (233)
T ss_dssp EEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEECCCCT-
T ss_pred EEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEeccCC-
Confidence 5999999999999999974111113455553 45554443 33322 22222221 1222238899887643222
Q ss_pred hhhcCCCcccchhhccccccCcceEEEecChh----------HHHHHHHhhhhcccccccccccCCCCCCC
Q 007128 533 IEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS----------VVDFVKKYLRALNWEAVATTADASSDSDK 593 (617)
Q Consensus 533 ~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~----------~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 593 (617)
. +...+|.|+.|+|||||.++|..... ...+..+.+...+++.+ +..+ .++++
T Consensus 159 -~----~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~-e~i~--L~pf~ 221 (233)
T 4df3_A 159 -E----QAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIK-DVVH--LDPFD 221 (233)
T ss_dssp -T----HHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEE-EEEE--CTTTS
T ss_pred -h----hHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEE-EEEc--cCCCC
Confidence 2 45679999999999999999874322 33445556667788775 5554 56643
No 385
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.34 E-value=1.5e-08 Score=99.26 Aligned_cols=94 Identities=19% Similarity=0.212 Sum_probs=63.6
Q ss_pred hhHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CCceEEEeec----cc---ccchh-hhhhhcccCC-----cchh
Q 007128 460 RNLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PNTLKLIYDR----GL---IGSIH-NWCEAYSTYP-----RTYD 522 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~~l~~~~~r----gl---~~~~~-~~~e~~~~~p-----~tfD 522 (617)
.+|||+|||+|.++..|++. +. .|+.+|. +.+++.|.++ |+ +-.++ +..+.++.++ .+||
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLALPKDG---TLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCTTC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred CEEEEeCCcchHHHHHHHHhCCCCC---EEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 46999999999999999986 45 4556663 4666655544 32 11111 2222233333 7899
Q ss_pred hhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecCh
Q 007128 523 LLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 523 lvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
+|+++.... +...++.++.|+|||||++++.+..
T Consensus 143 ~v~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 143 LIYIDADKA-------NTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp EEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EEEECCCHH-------HHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 998654332 3456899999999999999997764
No 386
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.34 E-value=2.5e-08 Score=100.01 Aligned_cols=95 Identities=13% Similarity=0.079 Sum_probs=64.0
Q ss_pred hhhHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CCceEEEeec----cc---ccchh-hhhhhcccC-----Ccch
Q 007128 459 LRNLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PNTLKLIYDR----GL---IGSIH-NWCEAYSTY-----PRTY 521 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~~l~~~~~r----gl---~~~~~-~~~e~~~~~-----p~tf 521 (617)
-++|||+|||+|..+..|++. +. .|+.+|. +.+++.|.++ |+ +-.++ +..+.++.+ +.+|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~---~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~f 137 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDG---QVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQF 137 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTC---EEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCE
Confidence 357999999999999999873 44 4555563 6777776655 33 21222 221222323 4789
Q ss_pred hhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecCh
Q 007128 522 DLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 522 Dlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
|+|+++.... +...++.++.|+|||||++++.+..
T Consensus 138 D~V~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 138 DFIFIDADKT-------NYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp EEEEEESCGG-------GHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred eEEEEcCChH-------HhHHHHHHHHHhcCCCeEEEEECCc
Confidence 9998765433 3456899999999999999996543
No 387
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.33 E-value=3.6e-08 Score=98.51 Aligned_cols=99 Identities=16% Similarity=0.094 Sum_probs=74.9
Q ss_pred ceeEEEeeccccccccccccc-chhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccccccccccc
Q 007128 214 RLRTVLDVGCGVASFGAYLLS-SDVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWL 292 (617)
Q Consensus 214 ~~~~VLDVGCG~G~~~~~L~~-~~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~ 292 (617)
.+.+|||||||+|.++..+.. ..++++|+++.++..++ +.+...+.+..+.+.|....+++. +||+|++.-++++..
T Consensus 105 ~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar-~~~~~~g~~~~~~v~D~~~~~~~~-~~DvvLllk~lh~LE 182 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVIT-PFAREKDWDFTFALQDVLCAPPAE-AGDLALIFKLLPLLE 182 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHH-HHHHHTTCEEEEEECCTTTSCCCC-BCSEEEEESCHHHHH
T ss_pred CCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHH-HHHHhcCCCceEEEeecccCCCCC-CcchHHHHHHHHHhh
Confidence 346999999999999887663 47999999999888877 345556788888999988888664 899999776644332
Q ss_pred cccceEEEEecccccCCceeee
Q 007128 293 QRDGILLLELDRLLRPGGYFAY 314 (617)
Q Consensus 293 ~~~~~~L~el~RvLrPGG~lvi 314 (617)
........++.+.|+++|.++-
T Consensus 183 ~q~~~~~~~ll~aL~~~~vvVs 204 (253)
T 3frh_A 183 REQAGSAMALLQSLNTPRMAVS 204 (253)
T ss_dssp HHSTTHHHHHHHHCBCSEEEEE
T ss_pred hhchhhHHHHHHHhcCCCEEEE
Confidence 3323344488889999977664
No 388
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.33 E-value=1.9e-08 Score=106.24 Aligned_cols=97 Identities=13% Similarity=0.092 Sum_probs=64.6
Q ss_pred hhhHHHhhhcchhhHhhhcCCceEEEEeecCCCCCceEEEeec----cc---ccchhhhhhhcccCCcchhhhhhhhhhh
Q 007128 459 LRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDGPNTLKLIYDR----GL---IGSIHNWCEAYSTYPRTYDLLHAWTVFS 531 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~~~~l~~~~~r----gl---~~~~~~~~e~~~~~p~tfDlvh~~~~~~ 531 (617)
-.+|||+|||+|.++..+++.+.. .|+.+|...+++.|.++ |+ +-.++.-.+.++ +|..||+|.+..++.
T Consensus 51 ~~~VLDiGcGtG~ls~~la~~g~~--~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 51 DKIVLDVGCGSGILSFFAAQAGAR--KIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVS-LPEQVDIIISEPMGY 127 (348)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCS--EEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCC-CSSCEEEEEECCCBT
T ss_pred cCEEEEcCCCccHHHHHHHhCCCC--EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCC-CCCceeEEEEeCchh
Confidence 346999999999999999887641 34444433465555443 33 222221112222 358899999988777
Q ss_pred hhhhcCCCcccchhhccccccCcceEEEe
Q 007128 532 DIEKRGCSGEDLLLEMDRILRPTGFVIIR 560 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~RiLrPgG~~ii~ 560 (617)
|+.. .++...+.++.|+|||||.+++.
T Consensus 128 ~~~~--~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 128 MLFN--ERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TBTT--TSHHHHHHHGGGGEEEEEEEESC
T ss_pred cCCh--HHHHHHHHHHHhhcCCCeEEEEe
Confidence 6541 24567888999999999999865
No 389
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.32 E-value=1.8e-08 Score=107.79 Aligned_cols=105 Identities=18% Similarity=0.129 Sum_probs=75.8
Q ss_pred ceeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCC-cccccccccccCC----CCCccccccccc
Q 007128 214 RLRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIP-AYLGVLGTKRLPY----PSRSFELAHCSR 286 (617)
Q Consensus 214 ~~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~-~~~~~~d~~~lpf----~~~sFDlV~~s~ 286 (617)
++.+|||+|||+|.++..++.. .|+++|+++.++..++. .+...++. +.+..+|+..... .+++||+|++.-
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~-n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEE-NARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHH-HHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHH-HHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 3578999999999999988864 69999999988887774 44444553 7778888765432 256899999753
Q ss_pred ccc--------ccccccceEEEEecccccCCceeeecChhh
Q 007128 287 CRI--------DWLQRDGILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 287 ~l~--------h~~~~~~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
-.+ ........++.++.++|+|||++++++...
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 211 111222457888999999999999976543
No 390
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.31 E-value=1.8e-08 Score=110.17 Aligned_cols=125 Identities=19% Similarity=0.179 Sum_probs=84.4
Q ss_pred eEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCC-CcccccccccccC-CCCCccccccccc--
Q 007128 216 RTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRLP-YPSRSFELAHCSR-- 286 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~lp-f~~~sFDlV~~s~-- 286 (617)
.+|||+|||+|..+..|++. .|+++|+++..+..++. .+...|+ ++.+...|...++ ..+++||+|++.-
T Consensus 107 ~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~-n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~DaPC 185 (456)
T 3m4x_A 107 EKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSE-NIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDAPC 185 (456)
T ss_dssp CEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHH-HHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEECCC
T ss_pred CEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCceEEEeCCHHHhhhhccccCCEEEECCCC
Confidence 68999999999988888764 48999999988777763 4444455 4667777877665 3457899998631
Q ss_pred ---cccc--------ccc--------ccceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhhhh
Q 007128 287 ---CRID--------WLQ--------RDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRIAA 346 (617)
Q Consensus 287 ---~l~h--------~~~--------~~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~v~ 346 (617)
..+. |.. ....+|.++.++|||||+|++++-...+...+ +.+..++++.+|+++.
T Consensus 186 Sg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne-----~vv~~~l~~~~~~l~~ 259 (456)
T 3m4x_A 186 SGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENE-----EIISWLVENYPVTIEE 259 (456)
T ss_dssp CCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTH-----HHHHHHHHHSSEEEEC
T ss_pred CCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCH-----HHHHHHHHhCCCEEEe
Confidence 1111 100 01157889999999999999875444332222 4567777777765543
No 391
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.31 E-value=4.5e-08 Score=101.49 Aligned_cols=144 Identities=15% Similarity=0.104 Sum_probs=85.7
Q ss_pred hhhHHHhhhcchhhHhhhcCC-ceEEEEeecCCC-CCceEEEeecc------c----ccchh-hhhhhccc-CCcchhhh
Q 007128 459 LRNLMDMKAHLGSFAAALKEK-DVWVMSVVPEDG-PNTLKLIYDRG------L----IGSIH-NWCEAYST-YPRTYDLL 524 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~-~~~v~~v~~~~~-~~~l~~~~~rg------l----~~~~~-~~~e~~~~-~p~tfDlv 524 (617)
-.+|||+|||.|+++..|++. ++ ..|+.+|. +.+++.+.++- + +-.+. |..+-... -+++||+|
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTV--EHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTC--CEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 357999999999999999976 22 24566664 46666555432 1 11111 21111111 14899999
Q ss_pred hhhhhhhhhhhcCCCcccchhhccccccCcceEEEecCh-----hHHHHHHHhhhhcccccccccccCCCCCCCCCCeEE
Q 007128 525 HAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ-----SVVDFVKKYLRALNWEAVATTADASSDSDKDGDEVV 599 (617)
Q Consensus 525 h~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~-----~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 599 (617)
.++...........--..++.++.|+|||||.+++.... ....++.+.+++.++..+ ..........+.+.-.+
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v-~~~~~~vP~yp~g~w~f 252 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASV-QYALMHVPTYPCGSIGT 252 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEE-EEEECCCTTSTTSCCEE
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcE-EEEEeecccccCcceEE
Confidence 986555422111001157899999999999999996543 355667777777778754 33321122233456678
Q ss_pred EEEEec
Q 007128 600 FIVQKK 605 (617)
Q Consensus 600 l~~~K~ 605 (617)
++|.|+
T Consensus 253 ~~as~~ 258 (304)
T 3bwc_A 253 LVCSKK 258 (304)
T ss_dssp EEEESS
T ss_pred EEEeCC
Confidence 889885
No 392
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.31 E-value=1.4e-08 Score=109.17 Aligned_cols=103 Identities=17% Similarity=0.080 Sum_probs=75.4
Q ss_pred eEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCC--CcccccccccccCC----CCCccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRLPY----PSRSFELAHCSR 286 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~lpf----~~~sFDlV~~s~ 286 (617)
.+|||+|||+|.++..++.. .|+++|+++.++..++. .+...++ ++.+..+|+..+.. .+++||+|++.-
T Consensus 219 ~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~-n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dp 297 (396)
T 2as0_A 219 DRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKE-NAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDP 297 (396)
T ss_dssp CEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHH-HHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEECC
Confidence 68999999999999999865 58999999988887774 4445555 57788888765431 256899999753
Q ss_pred ccc--------ccccccceEEEEecccccCCceeeecChhh
Q 007128 287 CRI--------DWLQRDGILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 287 ~l~--------h~~~~~~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
-.. +.......++.++.++|+|||++++++...
T Consensus 298 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 298 PAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp CCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 211 111223457889999999999998875443
No 393
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.31 E-value=2.4e-08 Score=99.60 Aligned_cols=96 Identities=13% Similarity=0.107 Sum_probs=69.9
Q ss_pred eEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCC--Cccccccccccc-C-C-----CCCcccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRL-P-Y-----PSRSFEL 281 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~l-p-f-----~~~sFDl 281 (617)
.+|||||||+|..+..+++. .|+++|+++.++..++. ...+.++ .+.+..+|+... + + ++++||+
T Consensus 72 ~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~-~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 150 (237)
T 3c3y_A 72 KKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLP-FIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDF 150 (237)
T ss_dssp CEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHH-HHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEE
T ss_pred CEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCE
Confidence 58999999999988888753 58999999988777763 3334455 356666776442 2 2 2578999
Q ss_pred ccccccccccccccceEEEEecccccCCceeeecC
Q 007128 282 AHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 282 V~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~ 316 (617)
|++... ......+++++.++|||||++++..
T Consensus 151 I~~d~~----~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 151 GFVDAD----KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEECSC----GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECCc----hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 986532 2233468889999999999999864
No 394
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.30 E-value=8.8e-08 Score=99.13 Aligned_cols=84 Identities=17% Similarity=0.266 Sum_probs=58.8
Q ss_pred hHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhC-CCcccccccc
Q 007128 193 KYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERG-IPAYLGVLGT 269 (617)
Q Consensus 193 ~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg-~~~~~~~~d~ 269 (617)
...+.+.+.+.. .. +.+|||||||+|.++..|++. .|+++|+++.++..++.+.. ..+ .++.+..+|+
T Consensus 29 ~i~~~i~~~~~~------~~--~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~-~~~~~~v~~~~~D~ 99 (299)
T 2h1r_A 29 GILDKIIYAAKI------KS--SDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCL-YEGYNNLEVYEGDA 99 (299)
T ss_dssp HHHHHHHHHHCC------CT--TCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHH-HTTCCCEEC----C
T ss_pred HHHHHHHHhcCC------CC--cCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHH-HcCCCceEEEECch
Confidence 345566666654 33 368999999999999999876 59999999988877764333 333 3577888888
Q ss_pred cccCCCCCcccccccccc
Q 007128 270 KRLPYPSRSFELAHCSRC 287 (617)
Q Consensus 270 ~~lpf~~~sFDlV~~s~~ 287 (617)
..++++ +||+|+++..
T Consensus 100 ~~~~~~--~~D~Vv~n~p 115 (299)
T 2h1r_A 100 IKTVFP--KFDVCTANIP 115 (299)
T ss_dssp CSSCCC--CCSEEEEECC
T ss_pred hhCCcc--cCCEEEEcCC
Confidence 887764 7999998643
No 395
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.30 E-value=2.2e-08 Score=105.54 Aligned_cols=95 Identities=17% Similarity=0.118 Sum_probs=62.6
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCCCCceEEEeec----cc---ccchhhhhhhcccCC-cchhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDGPNTLKLIYDR----GL---IGSIHNWCEAYSTYP-RTYDLLHAWTVFS 531 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~~~~l~~~~~r----gl---~~~~~~~~e~~~~~p-~tfDlvh~~~~~~ 531 (617)
.+|||+|||+|.++..+++.+. ..|+.+|..++++.|.++ |+ +-.++.-.+.++ +| ++||+|.+..+..
T Consensus 66 ~~VLDiGcGtG~ls~~la~~g~--~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~~~~ 142 (340)
T 2fyt_A 66 KVVLDVGCGTGILSMFAAKAGA--KKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVH-LPVEKVDVIISEWMGY 142 (340)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSCSCEEEEEECCCBT
T ss_pred CEEEEeeccCcHHHHHHHHcCC--CEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhc-CCCCcEEEEEEcCchh
Confidence 4699999999999999998864 135555543476666543 32 222222122332 45 8999999866322
Q ss_pred hhhhcCCCcccchhhccccccCcceEE
Q 007128 532 DIEKRGCSGEDLLLEMDRILRPTGFVI 558 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~RiLrPgG~~i 558 (617)
.+. +.-++..+|.++.|+|||||.++
T Consensus 143 ~l~-~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 143 FLL-FESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TBT-TTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hcc-CHHHHHHHHHHHHhhcCCCcEEE
Confidence 221 22356779999999999999998
No 396
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.30 E-value=1.8e-08 Score=100.59 Aligned_cols=133 Identities=14% Similarity=0.161 Sum_probs=78.8
Q ss_pred hhHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CCc----eEEEeec-ccccchhhhhhh--cccCCcchhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PNT----LKLIYDR-GLIGSIHNWCEA--YSTYPRTYDLLHAWT 528 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~~----l~~~~~r-gl~~~~~~~~e~--~~~~p~tfDlvh~~~ 528 (617)
.+|||+|||+|+++..|++. .. .|..+|. +.| ++.+.+| ++.....|-..+ +...+.+||+|.++.
T Consensus 78 ~~VLDlG~GtG~~t~~la~~v~~~G---~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~ 154 (232)
T 3id6_C 78 TKVLYLGAASGTTISHVSDIIELNG---KAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDI 154 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHHHTTTS---EEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECC
T ss_pred CEEEEEeecCCHHHHHHHHHhCCCC---EEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecC
Confidence 46999999999999998864 23 3555553 333 3333333 222222222211 112247899999875
Q ss_pred hhhhhhhcCCCcccchh-hccccccCcceEEEecCh----------hHHHHHHHhhhhcccccccccccCCCCCCCCCCe
Q 007128 529 VFSDIEKRGCSGEDLLL-EMDRILRPTGFVIIRDKQ----------SVVDFVKKYLRALNWEAVATTADASSDSDKDGDE 597 (617)
Q Consensus 529 ~~~~~~~~~c~~~~~l~-Em~RiLrPgG~~ii~~~~----------~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 597 (617)
.+. +...+|. .+.|+|||||.|++.-.. ++.+++...+++-+++.+ ...+ .+|. ..+.
T Consensus 155 a~~-------~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~-~~~~--l~p~-~~~h 223 (232)
T 3id6_C 155 AQP-------DQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETI-QIIN--LDPY-DKDH 223 (232)
T ss_dssp CCT-------THHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEE-EEEE--CTTT-CSSC
T ss_pred CCh-------hHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEE-EEec--cCCC-cCce
Confidence 543 4444554 556699999999987321 122345555666677776 4554 6665 3467
Q ss_pred EEEEEEecc
Q 007128 598 VVFIVQKKI 606 (617)
Q Consensus 598 ~~l~~~K~~ 606 (617)
.+++++|++
T Consensus 224 ~~v~~~~~~ 232 (232)
T 3id6_C 224 AIVLSKYKG 232 (232)
T ss_dssp EEEEEEEC-
T ss_pred EEEEEEeCC
Confidence 888888863
No 397
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.29 E-value=4.1e-08 Score=97.04 Aligned_cols=132 Identities=16% Similarity=0.132 Sum_probs=77.6
Q ss_pred hhHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CC----ceEEEeec-ccccchhhhhh--hcccCCcchhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PN----TLKLIYDR-GLIGSIHNWCE--AYSTYPRTYDLLHAWT 528 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~----~l~~~~~r-gl~~~~~~~~e--~~~~~p~tfDlvh~~~ 528 (617)
.+|||+|||+|.++..|++. +. .|+.+|. +. +++.+..+ ++.-...+..+ .++..+.+||+|.++.
T Consensus 79 ~~vLDlG~G~G~~~~~la~~~g~~~---~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~ 155 (233)
T 2ipx_A 79 AKVLYLGAASGTTVSHVSDIVGPDG---LVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADV 155 (233)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTC---EEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECC
T ss_pred CEEEEEcccCCHHHHHHHHHhCCCc---EEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcC
Confidence 46999999999999999876 24 3455553 22 33333332 22111112211 1222247999999844
Q ss_pred hhhhhhhcCCCc-ccchhhccccccCcceEEEecChhH----------HHHHHHhhhhcccccccccccCCCCCCCCCCe
Q 007128 529 VFSDIEKRGCSG-EDLLLEMDRILRPTGFVIIRDKQSV----------VDFVKKYLRALNWEAVATTADASSDSDKDGDE 597 (617)
Q Consensus 529 ~~~~~~~~~c~~-~~~l~Em~RiLrPgG~~ii~~~~~~----------~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 597 (617)
.. .+. ..++.++.|+|||||.+++.-.... ..+-.+++...+|+.+ ...+ .++.+ .+.
T Consensus 156 ~~-------~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~-~~~~--~~~~~-~~~ 224 (233)
T 2ipx_A 156 AQ-------PDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQ-EQLT--LEPYE-RDH 224 (233)
T ss_dssp CC-------TTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEE-EEEE--CTTTS-SSE
T ss_pred CC-------ccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceE-EEEe--cCCcc-CCc
Confidence 31 122 3457789999999999999655421 2222477888899886 4333 33332 345
Q ss_pred EEEEEEec
Q 007128 598 VVFIVQKK 605 (617)
Q Consensus 598 ~~l~~~K~ 605 (617)
.+++++|+
T Consensus 225 ~~v~~~~~ 232 (233)
T 2ipx_A 225 AVVVGVYR 232 (233)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 67777763
No 398
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.29 E-value=1.8e-08 Score=105.49 Aligned_cols=96 Identities=14% Similarity=0.142 Sum_probs=64.6
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCCCCceEEEeec----cc---ccchhhhhhhcccCC-cchhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDGPNTLKLIYDR----GL---IGSIHNWCEAYSTYP-RTYDLLHAWTVFS 531 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~~~~l~~~~~r----gl---~~~~~~~~e~~~~~p-~tfDlvh~~~~~~ 531 (617)
.+|||+|||+|.++..+++.+.. .|+.+|..++++.|.++ |+ +-.++.-.+.++ +| ++||+|++..+..
T Consensus 40 ~~VLDiGcGtG~ls~~la~~g~~--~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAKHGAK--HVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVH-LPFPKVDIIISEWMGY 116 (328)
T ss_dssp CEEEEETCTTSHHHHHHHHTCCS--EEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSSSCEEEEEECCCBT
T ss_pred CEEEEecCccHHHHHHHHHCCCC--EEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhcc-CCCCcccEEEEeCchh
Confidence 46999999999999999987641 35555543466655544 33 222222222332 45 8999999875544
Q ss_pred hhhhcCCCcccchhhccccccCcceEEE
Q 007128 532 DIEKRGCSGEDLLLEMDRILRPTGFVII 559 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~RiLrPgG~~ii 559 (617)
++. +.-.+..++.+++|+|||||.+++
T Consensus 117 ~l~-~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 117 FLL-YESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TBS-TTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hcc-cHHHHHHHHHHHHhhcCCCeEEEE
Confidence 332 334677899999999999999973
No 399
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.29 E-value=1.4e-08 Score=99.77 Aligned_cols=97 Identities=12% Similarity=0.108 Sum_probs=65.6
Q ss_pred hhhHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CCceEEEeec----cc---ccchh-hhhhhcccCC-----cch
Q 007128 459 LRNLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PNTLKLIYDR----GL---IGSIH-NWCEAYSTYP-----RTY 521 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~~l~~~~~r----gl---~~~~~-~~~e~~~~~p-----~tf 521 (617)
-++|||+|||+|.++..|++. +. .|+.+|. +.+++.|.++ |+ +-.++ +..+.++.++ .+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGA---RLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTC---EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCC---EEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 457999999999999999874 45 4566664 5677666553 33 22222 2223344444 699
Q ss_pred hhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecCh
Q 007128 522 DLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 522 Dlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
|+|+++....+.. +...++.++ |+|||||.+++.+..
T Consensus 136 D~V~~d~~~~~~~----~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 136 DMVFLDHWKDRYL----PDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp SEEEECSCGGGHH----HHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred EEEEEcCCcccch----HHHHHHHhc-cccCCCeEEEEeCCC
Confidence 9999877665443 234567778 999999999998754
No 400
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.27 E-value=1.1e-08 Score=95.19 Aligned_cols=95 Identities=12% Similarity=0.179 Sum_probs=65.4
Q ss_pred hHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc-ccchh-hhhhhcccCC---cchhhhhhhhhh
Q 007128 461 NLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL-IGSIH-NWCEAYSTYP---RTYDLLHAWTVF 530 (617)
Q Consensus 461 ~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl-~~~~~-~~~e~~~~~p---~tfDlvh~~~~~ 530 (617)
+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.++ |+ +-.++ +..+..+.++ .+||+|.++..|
T Consensus 44 ~vLD~GcG~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~ 120 (171)
T 1ws6_A 44 RFLDPFAGSGAVGLEAASEGW---EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPY 120 (171)
T ss_dssp EEEEETCSSCHHHHHHHHTTC---EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCT
T ss_pred eEEEeCCCcCHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCCC
Confidence 699999999999999998876 3777775 5777666553 21 11111 2222122222 389999998776
Q ss_pred hhhhhcCCCcccchhhcc--ccccCcceEEEecChh
Q 007128 531 SDIEKRGCSGEDLLLEMD--RILRPTGFVIIRDKQS 564 (617)
Q Consensus 531 ~~~~~~~c~~~~~l~Em~--RiLrPgG~~ii~~~~~ 564 (617)
. . +.+.++.++. |+|||||.+++.....
T Consensus 121 ~--~----~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 121 A--M----DLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp T--S----CTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred c--h----hHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 5 2 4566777777 9999999999987653
No 401
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.25 E-value=2.3e-07 Score=99.62 Aligned_cols=129 Identities=16% Similarity=0.174 Sum_probs=85.8
Q ss_pred hhHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCCCccccc
Q 007128 192 DKYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGIPAYLGV 266 (617)
Q Consensus 192 ~~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~ 266 (617)
....+.+.+.+.. ..+ .+|||+|||+|.++..++++ .++|+|+++.++..+ ..+.+..
T Consensus 25 ~~l~~~~~~~~~~------~~~--~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~ 87 (421)
T 2ih2_A 25 PEVVDFMVSLAEA------PRG--GRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGIL 87 (421)
T ss_dssp HHHHHHHHHHCCC------CTT--CEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEE
T ss_pred HHHHHHHHHhhcc------CCC--CEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEe
Confidence 3455666666643 222 48999999999999888753 589999999877665 2456667
Q ss_pred ccccccCCCCCccccccccccccccc----------ccc------------------ceEEEEecccccCCceeeecChh
Q 007128 267 LGTKRLPYPSRSFELAHCSRCRIDWL----------QRD------------------GILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 267 ~d~~~lpf~~~sFDlV~~s~~l~h~~----------~~~------------------~~~L~el~RvLrPGG~lvis~p~ 318 (617)
+|+...+. +++||+|+++--..... .+. ..++..+.++|+|||++++..|.
T Consensus 88 ~D~~~~~~-~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 88 ADFLLWEP-GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp SCGGGCCC-SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred CChhhcCc-cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 77776553 46899999852211100 100 13577899999999999998876
Q ss_pred hhcCCHHHHHHHHHHHHHHHHhhh
Q 007128 319 AYAQDEEDLRIWKEMSALVERMCW 342 (617)
Q Consensus 319 ~~~~~~~~~~~w~~l~~l~~~~gf 342 (617)
....... .+.+.+.+.+.++
T Consensus 167 ~~l~~~~----~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 167 TWLVLED----FALLREFLAREGK 186 (421)
T ss_dssp GGGTCGG----GHHHHHHHHHHSE
T ss_pred HHhcCcc----HHHHHHHHHhcCC
Confidence 5433222 2456666766665
No 402
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.24 E-value=3.6e-08 Score=98.34 Aligned_cols=107 Identities=13% Similarity=0.068 Sum_probs=72.6
Q ss_pred hhHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CCceEEEeec-----cc--ccchh-hhhhhcccCC-cchhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PNTLKLIYDR-----GL--IGSIH-NWCEAYSTYP-RTYDLLHA 526 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~~l~~~~~r-----gl--~~~~~-~~~e~~~~~p-~tfDlvh~ 526 (617)
.+|||+|||+|.++..|++. +. +|+.+|. +.+++.+.++ |. +-..+ +..+ ++ ++ ++||+|.+
T Consensus 98 ~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~-~~~~~~D~v~~ 172 (258)
T 2pwy_A 98 MRVLEAGTGSGGLTLFLARAVGEKG---LVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEE-AE-LEEAAYDGVAL 172 (258)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGG-CC-CCTTCEEEEEE
T ss_pred CEEEEECCCcCHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhh-cC-CCCCCcCEEEE
Confidence 47999999999999999876 44 4555553 5666665554 31 11111 2221 11 34 78999987
Q ss_pred hhhhhhhhhcCCCcccchhhccccccCcceEEEecChh-HHHHHHHhhhhccccc
Q 007128 527 WTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS-VVDFVKKYLRALNWEA 580 (617)
Q Consensus 527 ~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~-~~~~~~~~~~~~~w~~ 580 (617)
+ .. +...+|.++.|+|||||.+++..+.. ...++.+.+...+|..
T Consensus 173 ~-----~~----~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~ 218 (258)
T 2pwy_A 173 D-----LM----EPWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFRL 218 (258)
T ss_dssp E-----SS----CGGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEEE
T ss_pred C-----Cc----CHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCce
Confidence 2 22 56789999999999999999988765 5556666666666654
No 403
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.24 E-value=4.4e-08 Score=96.64 Aligned_cols=118 Identities=8% Similarity=0.128 Sum_probs=71.3
Q ss_pred hhHHHhhhcchhhHhhhcCC--ceEEEEeecCCC-CCceEEEeec----cc--ccchh-hhhhhccc-CC-cchhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDG-PNTLKLIYDR----GL--IGSIH-NWCEAYST-YP-RTYDLLHAW 527 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~-~~~l~~~~~r----gl--~~~~~-~~~e~~~~-~p-~tfDlvh~~ 527 (617)
..|||+|||+|.++..|++. +. +|+.+|. +++++.|.++ |+ +-.+. |-.+-++. ++ ++||.|+++
T Consensus 36 ~~vLDiGcG~G~~~~~lA~~~p~~---~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 36 PVTLEIGFGMGASLVAMAKDRPEQ---DFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CEEEEESCTTCHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CeEEEEeeeChHHHHHHHHHCCCC---eEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 35999999999999999865 34 5666674 5666665444 33 11111 21111221 33 999999875
Q ss_pred hhhhhhh----hcCCCcccchhhccccccCcceEEEecC-hhHHHHHHHhhhhc-cccc
Q 007128 528 TVFSDIE----KRGCSGEDLLLEMDRILRPTGFVIIRDK-QSVVDFVKKYLRAL-NWEA 580 (617)
Q Consensus 528 ~~~~~~~----~~~c~~~~~l~Em~RiLrPgG~~ii~~~-~~~~~~~~~~~~~~-~w~~ 580 (617)
...+... ..+-.-..++.++.|+|||||.|++... ....+.+..++... .|+.
T Consensus 113 ~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~~~~~~~ 171 (218)
T 3dxy_A 113 FPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYKN 171 (218)
T ss_dssp SCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEEE
T ss_pred CCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHhCCCccc
Confidence 3222110 0111112589999999999999988655 44556666665543 4554
No 404
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.24 E-value=5e-08 Score=95.82 Aligned_cols=129 Identities=15% Similarity=0.260 Sum_probs=73.8
Q ss_pred hhHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CCceEEEee----c-cc---ccchhhhhhhcccCCcchhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PNTLKLIYD----R-GL---IGSIHNWCEAYSTYPRTYDLLHAW 527 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~~l~~~~~----r-gl---~~~~~~~~e~~~~~p~tfDlvh~~ 527 (617)
.+|||+|||+|.++..|++. +.. |+.+|. +.+++.+.+ + ++ .+.+.+. ..+...+.+||+|.++
T Consensus 75 ~~vLDlG~G~G~~~~~la~~~~~~~~---v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 75 KSVLYLGIASGTTASHVSDIVGWEGK---IFGIEFSPRVLRELVPIVEERRNIVPILGDATKP-EEYRALVPKVDVIFED 150 (227)
T ss_dssp CEEEEETTTSTTHHHHHHHHHCTTSE---EEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCG-GGGTTTCCCEEEEEEC
T ss_pred CEEEEEeccCCHHHHHHHHHhCCCeE---EEEEECCHHHHHHHHHHHhccCCCEEEEccCCCc-chhhcccCCceEEEEC
Confidence 46999999999999999865 243 344442 333222211 1 11 1222111 0112234789999975
Q ss_pred hhhhhhhhcCCCcc-cchhhccccccCcceEEEecChh-----------HHHHHHHhhhhcccccccccccCCCCCCCCC
Q 007128 528 TVFSDIEKRGCSGE-DLLLEMDRILRPTGFVIIRDKQS-----------VVDFVKKYLRALNWEAVATTADASSDSDKDG 595 (617)
Q Consensus 528 ~~~~~~~~~~c~~~-~~l~Em~RiLrPgG~~ii~~~~~-----------~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 595 (617)
.... +.. .++.++.|+|||||++++.-... ..++++.+ ... ++.+ ...+ .++. ..
T Consensus 151 ~~~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~-~~~~--~~~~-~~ 217 (227)
T 1g8a_A 151 VAQP-------TQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY-FEVI-ERLN--LEPY-EK 217 (227)
T ss_dssp CCST-------THHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEE-EEEE--CTTT-SS
T ss_pred CCCH-------hHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-ceee-eEec--cCcc-cC
Confidence 4311 222 44999999999999999852221 12456666 444 8776 4443 3332 23
Q ss_pred CeEEEEEEec
Q 007128 596 DEVVFIVQKK 605 (617)
Q Consensus 596 ~~~~l~~~K~ 605 (617)
...+++++|+
T Consensus 218 ~~~~~~~~~~ 227 (227)
T 1g8a_A 218 DHALFVVRKT 227 (227)
T ss_dssp SEEEEEEECC
T ss_pred CCEEEEEEeC
Confidence 5678888874
No 405
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.24 E-value=6.6e-08 Score=94.60 Aligned_cols=94 Identities=12% Similarity=0.089 Sum_probs=62.7
Q ss_pred hhHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CCceEEEeec----cc---ccchh-hhhhhcccCC----cchhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PNTLKLIYDR----GL---IGSIH-NWCEAYSTYP----RTYDL 523 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~~l~~~~~r----gl---~~~~~-~~~e~~~~~p----~tfDl 523 (617)
.+|||+|||+|.++..|++. +. .|+.+|. +.+++.|.++ |+ +-.++ +..+.++.++ .+||+
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 60 RNILEIGTLGGYSTIWLARGLSSGG---RVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCSSC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred CEEEEecCCccHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 46999999999999999987 55 4566663 5666655443 33 11111 2222222222 57999
Q ss_pred hhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecCh
Q 007128 524 LHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 524 vh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
|+++.... ....++.++.|+|||||++++.+..
T Consensus 137 v~~d~~~~-------~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 137 IFIDADKQ-------NNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp EEECSCGG-------GHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred EEEcCCcH-------HHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 98765544 3357899999999999999987654
No 406
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.23 E-value=3.8e-08 Score=104.57 Aligned_cols=96 Identities=18% Similarity=0.177 Sum_probs=64.6
Q ss_pred cchhhHHHhhhcchhhHhhhcCC--ceEEEEeecCCCCCceEEEeec-ccccchhhhhhhcccCCcchhhhhhhhhhhhh
Q 007128 457 NSLRNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDGPNTLKLIYDR-GLIGSIHNWCEAYSTYPRTYDLLHAWTVFSDI 533 (617)
Q Consensus 457 ~~~r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~~~~l~~~~~r-gl~~~~~~~~e~~~~~p~tfDlvh~~~~~~~~ 533 (617)
....+|||+|||+|.++..|+++ ++.+ +.+|.+.+++.+.+. ++--..+|..+ .+|. ||+|++..+++|+
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~---~~~D~~~~~~~a~~~~~v~~~~~d~~~---~~~~-~D~v~~~~~lh~~ 280 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKG---INFDLPQVIENAPPLSGIEHVGGDMFA---SVPQ-GDAMILKAVCHNW 280 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEE---EEEECHHHHTTCCCCTTEEEEECCTTT---CCCC-EEEEEEESSGGGS
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeE---EEeChHHHHHhhhhcCCCEEEeCCccc---CCCC-CCEEEEecccccC
Confidence 44568999999999999999875 3433 333334454444432 22111223222 2455 9999999999977
Q ss_pred hhcCCCcccchhhccccccCcceEEEec
Q 007128 534 EKRGCSGEDLLLEMDRILRPTGFVIIRD 561 (617)
Q Consensus 534 ~~~~c~~~~~l~Em~RiLrPgG~~ii~~ 561 (617)
... ....+|.++.|+|||||+++|.|
T Consensus 281 ~d~--~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 281 SDE--KCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp CHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CHH--HHHHHHHHHHHhcCCCCEEEEEE
Confidence 622 12389999999999999999985
No 407
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.23 E-value=3.8e-08 Score=112.93 Aligned_cols=101 Identities=13% Similarity=0.175 Sum_probs=70.8
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----------cc--ccchhhhhhhcccCCcchhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----------GL--IGSIHNWCEAYSTYPRTYDLLHA 526 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----------gl--~~~~~~~~e~~~~~p~tfDlvh~ 526 (617)
.+|||+|||+|.++..|++.+.....|+.+|. +.|++.|.+| |+ +-.++.-.+.++..+++||+|+|
T Consensus 723 ~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlVV~ 802 (950)
T 3htx_A 723 STLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGTC 802 (950)
T ss_dssp SEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEEEE
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEEEE
Confidence 46999999999999999998621125667774 6788877662 32 22222111223322389999999
Q ss_pred hhhhhhhhhcCCCcccchhhccccccCcceEEEecCh
Q 007128 527 WTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 527 ~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
..++.|+... ....++.|+.|+|||| .++|..+.
T Consensus 803 ~eVLeHL~dp--~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 803 LEVIEHMEED--QACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp ESCGGGSCHH--HHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred eCchhhCChH--HHHHHHHHHHHHcCCC-EEEEEecC
Confidence 9999998632 2346899999999999 88887654
No 408
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.23 E-value=1.1e-07 Score=100.00 Aligned_cols=123 Identities=11% Similarity=0.125 Sum_probs=83.0
Q ss_pred ceeEEEeeccccccccccccc---------chhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCccccccc
Q 007128 214 RLRTVLDVGCGVASFGAYLLS---------SDVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHC 284 (617)
Q Consensus 214 ~~~~VLDVGCG~G~~~~~L~~---------~~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~ 284 (617)
+..+|||+|||+|.++..+++ ..++|+|+++.++..++... ...++++.+..+|+... .+.+.||+|++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~-~~~g~~~~i~~~D~l~~-~~~~~fD~Ii~ 207 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGA-DLQRQKMTLLHQDGLAN-LLVDPVDVVIS 207 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHH-HHHTCCCEEEESCTTSC-CCCCCEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHH-HhCCCCceEEECCCCCc-cccCCccEEEE
Confidence 457999999999998877754 34789999988777776433 33466777777776553 34578999998
Q ss_pred ccccccccccc-----------------ceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhh
Q 007128 285 SRCRIDWLQRD-----------------GILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCW 342 (617)
Q Consensus 285 s~~l~h~~~~~-----------------~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf 342 (617)
+-.+..+..+. ..++.++.+.|+|||++++..|........ ...+.+.+.+.++
T Consensus 208 NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~----~~~ir~~l~~~~~ 278 (344)
T 2f8l_A 208 DLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSD----FAKVDKFIKKNGH 278 (344)
T ss_dssp ECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTT----HHHHHHHHHHHEE
T ss_pred CCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCch----HHHHHHHHHhCCe
Confidence 75432221110 136788899999999999988765322221 1456666666555
No 409
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.22 E-value=1.1e-07 Score=95.46 Aligned_cols=80 Identities=13% Similarity=0.205 Sum_probs=55.8
Q ss_pred hHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCccccccccc
Q 007128 193 KYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTK 270 (617)
Q Consensus 193 ~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~ 270 (617)
...+.+.+.+.. . ++.+|||||||+|.++..|+++ .|+++|+++.++..++..... ..++.+..+|+.
T Consensus 17 ~~~~~i~~~~~~------~--~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~--~~~v~~~~~D~~ 86 (244)
T 1qam_A 17 HNIDKIMTNIRL------N--EHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVD--HDNFQVLNKDIL 86 (244)
T ss_dssp HHHHHHHTTCCC------C--TTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTT--CCSEEEECCCGG
T ss_pred HHHHHHHHhCCC------C--CCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhcc--CCCeEEEEChHH
Confidence 344555555543 2 2368999999999999999876 589999998777665533221 235788889999
Q ss_pred ccCCCC-Cccccc
Q 007128 271 RLPYPS-RSFELA 282 (617)
Q Consensus 271 ~lpf~~-~sFDlV 282 (617)
.+++++ ..|++|
T Consensus 87 ~~~~~~~~~~~vv 99 (244)
T 1qam_A 87 QFKFPKNQSYKIF 99 (244)
T ss_dssp GCCCCSSCCCEEE
T ss_pred hCCcccCCCeEEE
Confidence 998874 456433
No 410
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.22 E-value=8.3e-08 Score=110.50 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=75.9
Q ss_pred eEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHhCCC---cccccccccc-cCCCCCccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALERGIP---AYLGVLGTKR-LPYPSRSFELAHCSRCR 288 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~rg~~---~~~~~~d~~~-lpf~~~sFDlV~~s~~l 288 (617)
.+|||+|||+|.++..++.. .|+++|+++.++..++. .+...++. +.+.++|+.. ++...++||+|++.--.
T Consensus 541 ~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~-N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP~ 619 (703)
T 3v97_A 541 KDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAER-NLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPT 619 (703)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHH-HHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCCS
T ss_pred CcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCcc
Confidence 58999999999999888764 48999999998888874 44445553 7788888765 44456789999975321
Q ss_pred ----------cccccccceEEEEecccccCCceeeecChhh
Q 007128 289 ----------IDWLQRDGILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 289 ----------~h~~~~~~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
.+.......++.++.++|+|||+|+++....
T Consensus 620 f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 620 FSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp BC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred ccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCc
Confidence 1122223446888999999999999876543
No 411
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.21 E-value=2e-08 Score=97.53 Aligned_cols=98 Identities=11% Similarity=0.121 Sum_probs=66.1
Q ss_pred hHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc----ccchh-hhhhhcccC-Ccc-hhhhhhhh
Q 007128 461 NLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL----IGSIH-NWCEAYSTY-PRT-YDLLHAWT 528 (617)
Q Consensus 461 ~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl----~~~~~-~~~e~~~~~-p~t-fDlvh~~~ 528 (617)
+|||+|||+|.++..++.++. ..|+.+|. +.+++.|.++ |+ +-.+. |..+..+.. +++ ||+|.++.
T Consensus 56 ~vLDlGcGtG~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 133 (201)
T 2ift_A 56 ECLDGFAGSGSLGFEALSRQA--KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDP 133 (201)
T ss_dssp EEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECC
T ss_pred eEEEcCCccCHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECC
Confidence 699999999999998776654 25777774 5777777654 22 11111 221112222 378 99999876
Q ss_pred hhhhhhhcCCCcccchhhc--cccccCcceEEEecChhH
Q 007128 529 VFSDIEKRGCSGEDLLLEM--DRILRPTGFVIIRDKQSV 565 (617)
Q Consensus 529 ~~~~~~~~~c~~~~~l~Em--~RiLrPgG~~ii~~~~~~ 565 (617)
.|. . -+...++.++ .|+|||||.+++......
T Consensus 134 ~~~-~----~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 134 PFH-F----NLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp CSS-S----CHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CCC-C----ccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 654 1 1456788888 889999999999877644
No 412
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.21 E-value=2.4e-08 Score=100.65 Aligned_cols=91 Identities=14% Similarity=0.165 Sum_probs=61.9
Q ss_pred hhHHHhhhcchhhHhhhcCC--ceEEEEeecCCC-CCceEEEeeccc-ccchhhhhhhcccCCcchhhhhhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDG-PNTLKLIYDRGL-IGSIHNWCEAYSTYPRTYDLLHAWTVFSDIEK 535 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~-~~~l~~~~~rgl-~~~~~~~~e~~~~~p~tfDlvh~~~~~~~~~~ 535 (617)
.+|||+|||+|.++..|++. +. .|+.+|. +.+++.+.+++- +..+..-.+.++.-+++||+|.+..+
T Consensus 87 ~~vLdiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~------ 157 (269)
T 1p91_A 87 TAVLDIGCGEGYYTHAFADALPEI---TTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYA------ 157 (269)
T ss_dssp CEEEEETCTTSTTHHHHHHTCTTS---EEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESC------
T ss_pred CEEEEECCCCCHHHHHHHHhCCCC---eEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCC------
Confidence 36999999999999999886 55 4555563 577777766642 11111111222311289999997332
Q ss_pred cCCCcccchhhccccccCcceEEEecChh
Q 007128 536 RGCSGEDLLLEMDRILRPTGFVIIRDKQS 564 (617)
Q Consensus 536 ~~c~~~~~l~Em~RiLrPgG~~ii~~~~~ 564 (617)
...+.|+.|+|||||.+++..+..
T Consensus 158 -----~~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 158 -----PCKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp -----CCCHHHHHHHEEEEEEEEEEEECT
T ss_pred -----hhhHHHHHHhcCCCcEEEEEEcCH
Confidence 347999999999999999987653
No 413
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.21 E-value=3.5e-08 Score=97.54 Aligned_cols=128 Identities=10% Similarity=0.035 Sum_probs=79.4
Q ss_pred hHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CCceEEEeec----ccc----cchh-hhhhhcccC-Ccchhhhhh
Q 007128 461 NLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PNTLKLIYDR----GLI----GSIH-NWCEAYSTY-PRTYDLLHA 526 (617)
Q Consensus 461 ~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~~l~~~~~r----gl~----~~~~-~~~e~~~~~-p~tfDlvh~ 526 (617)
+|||+|||+|.++..|++. +. .|+.+|. +.+++.|.++ |+- -.++ +..+.++.+ +++||+|.+
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNT---TLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTS---EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CEEEEcCCchHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 7999999999999999863 44 4566664 5666655443 321 1111 122223445 489999987
Q ss_pred hhhhhhhhhcCCCcccchhhccccccCcceEEEecChh------------HHHHHHHhhhhccccc-cc-ccccCCCCCC
Q 007128 527 WTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS------------VVDFVKKYLRALNWEA-VA-TTADASSDSD 592 (617)
Q Consensus 527 ~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~------------~~~~~~~~~~~~~w~~-~~-~~~~~~~~~~ 592 (617)
+.... +....+.++.|+|||||.+++.+..- ....++++.+.+.+.. +. .+..
T Consensus 136 d~~~~-------~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp------ 202 (221)
T 3dr5_A 136 QVSPM-------DLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHVARLP------ 202 (221)
T ss_dssp CCCTT-------THHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEEEEES------
T ss_pred cCcHH-------HHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeEEEee------
Confidence 54333 44568999999999999999965432 1223555555555543 10 1221
Q ss_pred CCCCeEEEEEEecc
Q 007128 593 KDGDEVVFIVQKKI 606 (617)
Q Consensus 593 ~~~~~~~l~~~K~~ 606 (617)
-...+++++|.+
T Consensus 203 --~gdGl~~~~~~~ 214 (221)
T 3dr5_A 203 --LGAGLTVVTKAL 214 (221)
T ss_dssp --STTCEEEEEECC
T ss_pred --ccchHHHHHHHH
Confidence 235688898865
No 414
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.20 E-value=2.5e-08 Score=93.91 Aligned_cols=98 Identities=12% Similarity=0.146 Sum_probs=65.8
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc---ccch-hhhhhhcccCCcchhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL---IGSI-HNWCEAYSTYPRTYDLLHAWTVF 530 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl---~~~~-~~~~e~~~~~p~tfDlvh~~~~~ 530 (617)
.+|||+|||+|.++..|++++. ..|+.+|. +.+++.+.++ |+ +-.+ .++.+.++..+..||+|.++..|
T Consensus 33 ~~vLDlGcG~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~ 110 (177)
T 2esr_A 33 GRVLDLFAGSGGLAIEAVSRGM--SAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPY 110 (177)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC--CEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSS
T ss_pred CeEEEeCCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCC
Confidence 3699999999999999998753 25777774 5676666543 22 1111 13333233345789999997666
Q ss_pred hhhhhcCCCcccchhhcc--ccccCcceEEEecChh
Q 007128 531 SDIEKRGCSGEDLLLEMD--RILRPTGFVIIRDKQS 564 (617)
Q Consensus 531 ~~~~~~~c~~~~~l~Em~--RiLrPgG~~ii~~~~~ 564 (617)
... ..+.++.++. |+|||||.+++.....
T Consensus 111 ~~~-----~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 111 AKE-----TIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp HHH-----HHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred Ccc-----hHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 421 2355666665 9999999999987654
No 415
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.20 E-value=5.7e-08 Score=102.38 Aligned_cols=96 Identities=16% Similarity=0.175 Sum_probs=65.1
Q ss_pred chhhHHHhhhcchhhHhhhcCC--ceEEEEeecCCCCCceEEEeec-ccccchhhhhhhcccCCcchhhhhhhhhhhhhh
Q 007128 458 SLRNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDGPNTLKLIYDR-GLIGSIHNWCEAYSTYPRTYDLLHAWTVFSDIE 534 (617)
Q Consensus 458 ~~r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~~~~l~~~~~r-gl~~~~~~~~e~~~~~p~tfDlvh~~~~~~~~~ 534 (617)
...+|||+|||+|.++..|+++ +.. ++.+|.+.+++.+.+. ++--..+|..+ .+|. ||+|.+..+++|+.
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~---~~~~D~~~~~~~a~~~~~v~~~~~d~~~---~~p~-~D~v~~~~~lh~~~ 260 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLK---CIVFDRPQVVENLSGSNNLTYVGGDMFT---SIPN-ADAVLLKYILHNWT 260 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCE---EEEEECHHHHTTCCCBTTEEEEECCTTT---CCCC-CSEEEEESCGGGSC
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCe---EEEeeCHHHHhhcccCCCcEEEeccccC---CCCC-ccEEEeehhhccCC
Confidence 4467999999999999999865 343 3334434555544432 22111223222 2444 99999999999876
Q ss_pred hcCCCcccchhhccccccC---cceEEEecC
Q 007128 535 KRGCSGEDLLLEMDRILRP---TGFVIIRDK 562 (617)
Q Consensus 535 ~~~c~~~~~l~Em~RiLrP---gG~~ii~~~ 562 (617)
.. +...+|.++.|+||| ||+++|.|.
T Consensus 261 d~--~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 261 DK--DCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp HH--HHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred HH--HHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 22 123899999999999 999999864
No 416
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.19 E-value=1.4e-07 Score=97.36 Aligned_cols=145 Identities=10% Similarity=0.024 Sum_probs=78.8
Q ss_pred chhhHHHhhhcchhhHhhhcCC-ceEEEEeecCCC-CCceEEEeeccc-----------ccchh-hhhhhcccCCcchhh
Q 007128 458 SLRNLMDMKAHLGSFAAALKEK-DVWVMSVVPEDG-PNTLKLIYDRGL-----------IGSIH-NWCEAYSTYPRTYDL 523 (617)
Q Consensus 458 ~~r~vLD~g~G~G~fa~~L~~~-~~~v~~v~~~~~-~~~l~~~~~rgl-----------~~~~~-~~~e~~~~~p~tfDl 523 (617)
+-++|||+|||+|+++..|++. ++ ..|+.+|. +.++++|.++-- +-.++ |..+-+...+++||+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~--~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNV--ESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTC--CEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccE
Confidence 4568999999999999999986 33 25677774 678777765410 11111 111112222489999
Q ss_pred hhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecC-----hhHHHHHHHhhhhcccccccccccCCCCCCCCCCeE
Q 007128 524 LHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDK-----QSVVDFVKKYLRALNWEAVATTADASSDSDKDGDEV 598 (617)
Q Consensus 524 vh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~-----~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 598 (617)
|.++...+........-..++.++.|+|||||.+++... .+....+.+.+++. +..+ ..........+.+...
T Consensus 161 Ii~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~-F~~v-~~~~~~vp~~p~g~~~ 238 (294)
T 3adn_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHY-FSDV-GFYQAAIPTYYGGIMT 238 (294)
T ss_dssp EEECC----------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHH-CSEE-EEEEEECTTSSSSEEE
T ss_pred EEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHH-CCCe-EEEEEEecccCCCceE
Confidence 998554332111111125789999999999999999642 22233333333322 1211 1110001122345567
Q ss_pred EEEEEecc
Q 007128 599 VFIVQKKI 606 (617)
Q Consensus 599 ~l~~~K~~ 606 (617)
+++|.|..
T Consensus 239 f~~as~~~ 246 (294)
T 3adn_A 239 FAWATDND 246 (294)
T ss_dssp EEEEESCT
T ss_pred EEEEeCCc
Confidence 88888865
No 417
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.19 E-value=4.1e-08 Score=96.99 Aligned_cols=93 Identities=12% Similarity=0.207 Sum_probs=64.9
Q ss_pred hhHHHhhhcchhhHhhhcCC--ceEEEEeecCCC-CCceEEEeec----cc---ccchh-hhhhhcccC--Ccchhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDG-PNTLKLIYDR----GL---IGSIH-NWCEAYSTY--PRTYDLLHA 526 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~-~~~l~~~~~r----gl---~~~~~-~~~e~~~~~--p~tfDlvh~ 526 (617)
.+|||+|||+|.++..|++. +. .|+.+|. +.+++.|.++ |+ +..++ +..+.++.. +++||+|.+
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQALPEA---TIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHCTTC---EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred CEEEEecCCCcHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 47999999999999999875 44 5666664 5666666555 33 11111 222212222 478999998
Q ss_pred hhhhhhhhhcCCCcccchhhccccccCcceEEEecC
Q 007128 527 WTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDK 562 (617)
Q Consensus 527 ~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~ 562 (617)
+...+ +...+|.++.|+|||||.+++.+.
T Consensus 133 ~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 133 DAAKG-------QYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp EGGGS-------CHHHHHHHHGGGEEEEEEEEEETT
T ss_pred CCCHH-------HHHHHHHHHHHHcCCCeEEEEEcC
Confidence 66654 567899999999999999999753
No 418
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.18 E-value=2.1e-07 Score=94.55 Aligned_cols=110 Identities=17% Similarity=0.127 Sum_probs=74.8
Q ss_pred hhHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CCceEEEeec----ccccchhhhhhhcc-cCC-cchhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWCEAYS-TYP-RTYDLLHAWTV 529 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~e~~~-~~p-~tfDlvh~~~~ 529 (617)
.+|||+|||+|.++..|++. +. +|+.+|. +.+++.|.++ |+...+...+.++. .++ ++||+|.++
T Consensus 114 ~~VLDiG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~V~~~-- 188 (277)
T 1o54_A 114 DRIIDTGVGSGAMCAVLARAVGSSG---KVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVDALFLD-- 188 (277)
T ss_dssp CEEEEECCTTSHHHHHHHHHTTTTC---EEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEEEEEEC--
T ss_pred CEEEEECCcCCHHHHHHHHHhCCCc---EEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCccCEEEEC--
Confidence 36999999999999999876 34 5666674 5666666554 33111111111111 134 789999872
Q ss_pred hhhhhhcCCCcccchhhccccccCcceEEEecCh-hHHHHHHHhhhhcccccc
Q 007128 530 FSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ-SVVDFVKKYLRALNWEAV 581 (617)
Q Consensus 530 ~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~-~~~~~~~~~~~~~~w~~~ 581 (617)
. .+...+|.++.|+|||||.+++..+. ....++.+.+...+|..+
T Consensus 189 ---~----~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~~ 234 (277)
T 1o54_A 189 ---V----PDPWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIRI 234 (277)
T ss_dssp ---C----SCGGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEEE
T ss_pred ---C----cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCcee
Confidence 2 25568999999999999999998874 356667777777777643
No 419
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.18 E-value=3.6e-07 Score=96.03 Aligned_cols=94 Identities=10% Similarity=0.110 Sum_probs=71.9
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCC--CcccccccccccCCCCCcccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGI--PAYLGVLGTKRLPYPSRSFELAHCSRCRIDW 291 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~--~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~ 291 (617)
.+|||+|||+|.++.. +.. .|+++|+++.++..++ +.+...++ ++.+..+|+.... ++||+|++..- ..
T Consensus 197 ~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~-~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP--~~ 269 (336)
T 2yx1_A 197 DVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLK-KNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLP--KF 269 (336)
T ss_dssp CEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHH-HHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCT--TT
T ss_pred CEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHH-HHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCc--Hh
Confidence 6899999999999888 654 5899999998888777 44444555 4778888887765 78999997521 11
Q ss_pred ccccceEEEEecccccCCceeeecChhh
Q 007128 292 LQRDGILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 292 ~~~~~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
...++.++.++|+|||++++.....
T Consensus 270 ---~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 270 ---AHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp ---GGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred ---HHHHHHHHHHHcCCCCEEEEEEeec
Confidence 1357888999999999999875444
No 420
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.17 E-value=3.6e-08 Score=100.94 Aligned_cols=99 Identities=21% Similarity=0.308 Sum_probs=68.6
Q ss_pred hhHHHhhhcchh----hHhhhcCC-c----eEEEEeecCCC-CCceEEEeecc---------------------------
Q 007128 460 RNLMDMKAHLGS----FAAALKEK-D----VWVMSVVPEDG-PNTLKLIYDRG--------------------------- 502 (617)
Q Consensus 460 r~vLD~g~G~G~----fa~~L~~~-~----~~v~~v~~~~~-~~~l~~~~~rg--------------------------- 502 (617)
.+|+|+|||+|- +|..|++. + -+ .|+++|. ++||+.|.+.-
T Consensus 107 ~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~--~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 107 YRVWSAAASTGEEPYSIAITLADALGMAPGRW--KVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp EEEEESCCTTTHHHHHHHHHHHHHHCSCTTSE--EEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred cEEEEeeccCChhHHHHHHHHHHhcccCCCCe--EEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 369999999997 66666653 2 12 6788884 68877765421
Q ss_pred -----------cccchhhhhhhcccCC--cchhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecChh
Q 007128 503 -----------LIGSIHNWCEAYSTYP--RTYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS 564 (617)
Q Consensus 503 -----------l~~~~~~~~e~~~~~p--~tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~ 564 (617)
+.-..|++.++ .|| +.||+|.|..|+.|+... ....++.++.+.|||||++++-+...
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~--~~~~~~~fDlI~crnvliyf~~~--~~~~vl~~~~~~L~pgG~L~lg~sE~ 255 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEK--QYNVPGPFDAIFCRNVMIYFDKT--TQEDILRRFVPLLKPDGLLFAGHSEN 255 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCS--SCCCCCCEEEEEECSSGGGSCHH--HHHHHHHHHGGGEEEEEEEEECTTCC
T ss_pred ceeechhhcccCeEEecccCCC--CCCcCCCeeEEEECCchHhCCHH--HHHHHHHHHHHHhCCCcEEEEEeccc
Confidence 00012333331 233 789999999999887522 34689999999999999999976653
No 421
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.17 E-value=1.1e-07 Score=100.40 Aligned_cols=115 Identities=17% Similarity=0.151 Sum_probs=76.0
Q ss_pred chhhHHHhhhcchhhHhhhcCC--ceEEEEeecCCCCCceEEEeec-ccccchhhhhhhcccCCcchhhhhhhhhhhhhh
Q 007128 458 SLRNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDGPNTLKLIYDR-GLIGSIHNWCEAYSTYPRTYDLLHAWTVFSDIE 534 (617)
Q Consensus 458 ~~r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~~~~l~~~~~r-gl~~~~~~~~e~~~~~p~tfDlvh~~~~~~~~~ 534 (617)
...+|||+|||+|.++..|+++ ++.+ +.+|.+.+++.+.+. ++--..+|..+ .+| .||+|.+..+++|+.
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~---~~~D~~~~~~~a~~~~~v~~~~~d~~~---~~~-~~D~v~~~~vlh~~~ 265 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKC---TVFDQPQVVGNLTGNENLNFVGGDMFK---SIP-SADAVLLKWVLHDWN 265 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEE---EEEECHHHHSSCCCCSSEEEEECCTTT---CCC-CCSEEEEESCGGGSC
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeE---EEeccHHHHhhcccCCCcEEEeCccCC---CCC-CceEEEEcccccCCC
Confidence 4467999999999999999875 3333 333334455444331 22111223322 244 499999999999776
Q ss_pred hcCCCcccchhhccccccC---cceEEEecChh-----------------------------HHHHHHHhhhhcccccc
Q 007128 535 KRGCSGEDLLLEMDRILRP---TGFVIIRDKQS-----------------------------VVDFVKKYLRALNWEAV 581 (617)
Q Consensus 535 ~~~c~~~~~l~Em~RiLrP---gG~~ii~~~~~-----------------------------~~~~~~~~~~~~~w~~~ 581 (617)
.. +...+|.++.|+||| ||+++|.|..- ..++++++++..+++.+
T Consensus 266 d~--~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~ 342 (358)
T 1zg3_A 266 DE--QSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSY 342 (358)
T ss_dssp HH--HHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEE
T ss_pred HH--HHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCee
Confidence 32 124899999999999 99999975320 13357778888888875
No 422
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.16 E-value=7.3e-07 Score=96.92 Aligned_cols=96 Identities=20% Similarity=0.226 Sum_probs=68.2
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCC-Ccccccccccc----cCCCCCccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKR----LPYPSRSFELAHCSRCR 288 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~----lpf~~~sFDlV~~s~~l 288 (617)
.+|||+|||+|.++..|++. .|+|+|+++.++..++. .+...++ ++.+..+|+.. +++++++||+|++.--.
T Consensus 288 ~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~-n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr 366 (433)
T 1uwv_A 288 DRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQ-NARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPAR 366 (433)
T ss_dssp CEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHH-HHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECCCT
T ss_pred CEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHH-HHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEECCCC
Confidence 58999999999999999875 69999999998888874 4444555 57888888766 45667789999864221
Q ss_pred cccccccceEEEEecccccCCceeeecCh
Q 007128 289 IDWLQRDGILLLELDRLLRPGGYFAYSSP 317 (617)
Q Consensus 289 ~h~~~~~~~~L~el~RvLrPGG~lvis~p 317 (617)
. .. ..++..+ ..++|+++++++..
T Consensus 367 ~---g~-~~~~~~l-~~~~p~~ivyvsc~ 390 (433)
T 1uwv_A 367 A---GA-AGVMQQI-IKLEPIRIVYVSCN 390 (433)
T ss_dssp T---CC-HHHHHHH-HHHCCSEEEEEESC
T ss_pred c---cH-HHHHHHH-HhcCCCeEEEEECC
Confidence 1 00 1122222 23689999988753
No 423
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.14 E-value=1.2e-07 Score=97.70 Aligned_cols=107 Identities=14% Similarity=0.061 Sum_probs=70.2
Q ss_pred eeEEEeecc------cccc-ccccccc--chhhhhccCCCccchhhhHHHHHhCCCccc-ccccccccCCCCCccccccc
Q 007128 215 LRTVLDVGC------GVAS-FGAYLLS--SDVITMSLAPNDVHQNQIQFALERGIPAYL-GVLGTKRLPYPSRSFELAHC 284 (617)
Q Consensus 215 ~~~VLDVGC------G~G~-~~~~L~~--~~V~gvDis~~dl~~a~~~~a~~rg~~~~~-~~~d~~~lpf~~~sFDlV~~ 284 (617)
+.+|||+|| |+|+ .+..+.. ..|+++|+++. + .++.+ .++|+..++++ ++||+|+|
T Consensus 64 g~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-v------------~~v~~~i~gD~~~~~~~-~~fD~Vvs 129 (290)
T 2xyq_A 64 NMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-V------------SDADSTLIGDCATVHTA-NKWDLIIS 129 (290)
T ss_dssp TCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-B------------CSSSEEEESCGGGCCCS-SCEEEEEE
T ss_pred CCEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-C------------CCCEEEEECccccCCcc-CcccEEEE
Confidence 368999999 4465 2222222 35999999985 1 14667 88898888765 68999997
Q ss_pred cccccccc-----cc------cceEEEEecccccCCceeeecChhhhcCCHHHHHHHHHHHHHHHHhhhhh
Q 007128 285 SRCRIDWL-----QR------DGILLLELDRLLRPGGYFAYSSPEAYAQDEEDLRIWKEMSALVERMCWRI 344 (617)
Q Consensus 285 s~~l~h~~-----~~------~~~~L~el~RvLrPGG~lvis~p~~~~~~~~~~~~w~~l~~l~~~~gf~~ 344 (617)
+.. .++. +. ...+++++.|+|||||.|++..+.... .+++.++++..||..
T Consensus 130 n~~-~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~--------~~~l~~~l~~~GF~~ 191 (290)
T 2xyq_A 130 DMY-DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW--------NADLYKLMGHFSWWT 191 (290)
T ss_dssp CCC-CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC--------CHHHHHHHTTEEEEE
T ss_pred cCC-ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCC--------HHHHHHHHHHcCCcE
Confidence 532 2211 11 014788899999999999996543321 135666777777743
No 424
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.13 E-value=7.8e-08 Score=93.40 Aligned_cols=92 Identities=17% Similarity=0.109 Sum_probs=62.2
Q ss_pred hhHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CCceEEEeec----cc---ccchh-hhhhhcccCCcchhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PNTLKLIYDR----GL---IGSIH-NWCEAYSTYPRTYDLLHAW 527 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~~l~~~~~r----gl---~~~~~-~~~e~~~~~p~tfDlvh~~ 527 (617)
.+|||+|||+|.++..|++. +. .|+.+|. +.+++.|.++ |+ +-.++ +..+.++..+. ||+|.++
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISISS---RVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTTC---EEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 46999999999999999876 44 4555553 5666655543 32 11222 22222344457 9999875
Q ss_pred hhhhhhhhcCCCcccchhhccccccCcceEEEecC
Q 007128 528 TVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDK 562 (617)
Q Consensus 528 ~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~ 562 (617)
.. ..+...++.++.|+|||||.+++.+.
T Consensus 134 ~~-------~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 134 CD-------VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp TT-------TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred CC-------hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 22 22567899999999999999999653
No 425
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.13 E-value=8.6e-07 Score=91.61 Aligned_cols=84 Identities=10% Similarity=0.050 Sum_probs=65.7
Q ss_pred hHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCccccccccc
Q 007128 193 KYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTK 270 (617)
Q Consensus 193 ~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~ 270 (617)
...+.+.+.+.. ..+ .+|||||||+|.++..|++. .|+++|+++.++..++.... ...++.+..+|+.
T Consensus 37 ~i~~~Iv~~l~~------~~~--~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l 106 (295)
T 3gru_A 37 NFVNKAVESANL------TKD--DVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDAL 106 (295)
T ss_dssp HHHHHHHHHTTC------CTT--CEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTT
T ss_pred HHHHHHHHhcCC------CCc--CEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhc--cCCCeEEEECchh
Confidence 455667777665 333 68999999999999999875 59999999988877764443 2346788899999
Q ss_pred ccCCCCCccccccccc
Q 007128 271 RLPYPSRSFELAHCSR 286 (617)
Q Consensus 271 ~lpf~~~sFDlV~~s~ 286 (617)
.+++++.+||+|+++.
T Consensus 107 ~~~~~~~~fD~Iv~Nl 122 (295)
T 3gru_A 107 KVDLNKLDFNKVVANL 122 (295)
T ss_dssp TSCGGGSCCSEEEEEC
T ss_pred hCCcccCCccEEEEeC
Confidence 9998888899999764
No 426
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.12 E-value=4.2e-07 Score=98.69 Aligned_cols=96 Identities=19% Similarity=0.212 Sum_probs=69.5
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCcccccccccccccccc
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 293 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~~ 293 (617)
.+|||+|||+|.++..|++. .|+++|+++.++..++. .+...++++.+..+|+..+... +||+|++.... ..
T Consensus 292 ~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~-n~~~ngl~v~~~~~d~~~~~~~--~fD~Vv~dPPr---~g 365 (425)
T 2jjq_A 292 EKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARR-NVEINNVDAEFEVASDREVSVK--GFDTVIVDPPR---AG 365 (425)
T ss_dssp SEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHHHTCCEEEEECCTTTCCCT--TCSEEEECCCT---TC
T ss_pred CEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHH-HHHHcCCcEEEEECChHHcCcc--CCCEEEEcCCc---cc
Confidence 58999999999999999875 59999999998888874 4455566677888888776432 89999975321 11
Q ss_pred ccceEEEEecccccCCceeeecChh
Q 007128 294 RDGILLLELDRLLRPGGYFAYSSPE 318 (617)
Q Consensus 294 ~~~~~L~el~RvLrPGG~lvis~p~ 318 (617)
....++..+ +.|+|||+++++..+
T Consensus 366 ~~~~~~~~l-~~l~p~givyvsc~p 389 (425)
T 2jjq_A 366 LHPRLVKRL-NREKPGVIVYVSCNP 389 (425)
T ss_dssp SCHHHHHHH-HHHCCSEEEEEESCH
T ss_pred hHHHHHHHH-HhcCCCcEEEEECCh
Confidence 111233333 458999999998643
No 427
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.12 E-value=4.7e-08 Score=94.65 Aligned_cols=91 Identities=12% Similarity=0.133 Sum_probs=62.7
Q ss_pred hhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc--ccchh-hhhhhcccCCcchhhhhhhhhh
Q 007128 459 LRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL--IGSIH-NWCEAYSTYPRTYDLLHAWTVF 530 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl--~~~~~-~~~e~~~~~p~tfDlvh~~~~~ 530 (617)
-.+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.++ |+ +-.++ +..+... -+.+||+|.++.++
T Consensus 78 ~~~vLdiG~G~G~~~~~la~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D~i~~~~~~ 153 (210)
T 3lbf_A 78 QSRVLEIGTGSGYQTAILAHLVQ---HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQ-ARAPFDAIIVTAAP 153 (210)
T ss_dssp TCEEEEECCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-GGCCEEEEEESSBC
T ss_pred CCEEEEEcCCCCHHHHHHHHhCC---EEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCc-cCCCccEEEEccch
Confidence 34799999999999999998765 5556663 5666666554 22 11111 2222111 13799999998877
Q ss_pred hhhhhcCCCcccchhhccccccCcceEEEecCh
Q 007128 531 SDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 531 ~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
+++. .++.|+|||||++++..+.
T Consensus 154 ~~~~----------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 154 PEIP----------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp SSCC----------THHHHTEEEEEEEEEEECS
T ss_pred hhhh----------HHHHHhcccCcEEEEEEcC
Confidence 7543 3788999999999998765
No 428
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.11 E-value=5.1e-08 Score=95.80 Aligned_cols=91 Identities=16% Similarity=0.219 Sum_probs=62.6
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc----ccch-hhhhhhcccCCcchhhhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL----IGSI-HNWCEAYSTYPRTYDLLHAWTVFSDI 533 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl----~~~~-~~~~e~~~~~p~tfDlvh~~~~~~~~ 533 (617)
.+|||+|||+|.++..|++.+. +|+.+|. +.+++.+.++.- +-.+ .+..+.++ .+++||+|++..++.|+
T Consensus 72 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~~~ 147 (231)
T 1vbf_A 72 QKVLEIGTGIGYYTALIAEIVD---KVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE-EEKPYDRVVVWATAPTL 147 (231)
T ss_dssp CEEEEECCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG-GGCCEEEEEESSBBSSC
T ss_pred CEEEEEcCCCCHHHHHHHHHcC---EEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccc-cCCCccEEEECCcHHHH
Confidence 3799999999999999998764 5666663 566666655521 1111 12222111 13789999998887754
Q ss_pred hhcCCCcccchhhccccccCcceEEEecChh
Q 007128 534 EKRGCSGEDLLLEMDRILRPTGFVIIRDKQS 564 (617)
Q Consensus 534 ~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~ 564 (617)
..++.|+|||||.+++.....
T Consensus 148 ----------~~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 148 ----------LCKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp ----------CHHHHHTEEEEEEEEEEECSS
T ss_pred ----------HHHHHHHcCCCcEEEEEEcCC
Confidence 247899999999999987653
No 429
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.11 E-value=2e-07 Score=98.97 Aligned_cols=98 Identities=17% Similarity=0.135 Sum_probs=66.6
Q ss_pred ccchhhHHHhhhcchhhHhhhcCC--ceEEEEeecCCCCCceEEEeeccccc-chhhhhhhcccCCcchhhhhhhhhhhh
Q 007128 456 SNSLRNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDGPNTLKLIYDRGLIG-SIHNWCEAYSTYPRTYDLLHAWTVFSD 532 (617)
Q Consensus 456 ~~~~r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~~~~l~~~~~rgl~~-~~~~~~e~~~~~p~tfDlvh~~~~~~~ 532 (617)
......|||+|||+|.++..|+++ ++. ++.+|.+.+++.+.++.-+. ..+|..++ +|.. |+|++..++++
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~---~~~~D~~~~~~~a~~~~~v~~~~~D~~~~---~p~~-D~v~~~~vlh~ 271 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIK---GVNFDLPHVISEAPQFPGVTHVGGDMFKE---VPSG-DTILMKWILHD 271 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCE---EEEEECHHHHTTCCCCTTEEEEECCTTTC---CCCC-SEEEEESCGGG
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCe---EEEecCHHHHHhhhhcCCeEEEeCCcCCC---CCCC-CEEEehHHhcc
Confidence 455678999999999999999864 343 33334345555444432111 22233233 4544 99999999987
Q ss_pred hhhcCCCcccchhhccccccCcceEEEecC
Q 007128 533 IEKRGCSGEDLLLEMDRILRPTGFVIIRDK 562 (617)
Q Consensus 533 ~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~ 562 (617)
.... +...+|.++.|+|||||+|+|.|.
T Consensus 272 ~~d~--~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 272 WSDQ--HCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp SCHH--HHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred CCHH--HHHHHHHHHHHHcCCCCEEEEEEe
Confidence 6422 346899999999999999999764
No 430
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.10 E-value=7.7e-08 Score=96.15 Aligned_cols=114 Identities=18% Similarity=0.209 Sum_probs=65.0
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec------------cc--ccchh-hhhhhccc-CC-cch
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR------------GL--IGSIH-NWCEAYST-YP-RTY 521 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r------------gl--~~~~~-~~~e~~~~-~p-~tf 521 (617)
..|||+|||+|.|+..|+..+-- .+|+.+|. +.+++.+.++ |+ +-.+. |..+.++. ++ .+|
T Consensus 51 ~~vLDiGcG~G~~~~~la~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~ 129 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSPAFPE-DLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQL 129 (246)
T ss_dssp EEEEEETCTTSHHHHHHHHHSTT-SEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCE
T ss_pred CEEEEEcCCCCHHHHHHHHhCCC-CCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccccc
Confidence 36999999999999999876310 15666663 4565555432 33 11111 11111221 33 778
Q ss_pred hhhhhhhhhhhhh------hcCCCcccchhhccccccCcceEEEe-cChhHHHHHHHhhhhc
Q 007128 522 DLLHAWTVFSDIE------KRGCSGEDLLLEMDRILRPTGFVIIR-DKQSVVDFVKKYLRAL 576 (617)
Q Consensus 522 Dlvh~~~~~~~~~------~~~c~~~~~l~Em~RiLrPgG~~ii~-~~~~~~~~~~~~~~~~ 576 (617)
|.|... |+.-+ ..+--...++.++.|+|||||.|++. +.....+.+.+.+...
T Consensus 130 d~v~~~--~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~ 189 (246)
T 2vdv_E 130 SKMFFC--FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEH 189 (246)
T ss_dssp EEEEEE--SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHS
T ss_pred CEEEEE--CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhC
Confidence 877632 22100 00111147999999999999999884 5555555555555443
No 431
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.09 E-value=8.4e-08 Score=93.11 Aligned_cols=98 Identities=7% Similarity=0.009 Sum_probs=65.3
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc--ccchh-hhhhhcccCCcchhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL--IGSIH-NWCEAYSTYPRTYDLLHAWTVFS 531 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl--~~~~~-~~~e~~~~~p~tfDlvh~~~~~~ 531 (617)
.+|||+|||+|.++..++.++.. .|+.+|. +.+++.|.++ |+ +-.++ |..+..+..+.+||+|.++..|.
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~~--~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYAA--GATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCS--EEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS
T ss_pred CeEEEeCCCcCHHHHHHHhcCCC--EEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC
Confidence 36999999999999987776542 5777774 6777776554 22 22222 22221232237999999876644
Q ss_pred hhhhcCCCcccchhhcc--ccccCcceEEEecChh
Q 007128 532 DIEKRGCSGEDLLLEMD--RILRPTGFVIIRDKQS 564 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~--RiLrPgG~~ii~~~~~ 564 (617)
.. +...++.++. |+|||||.+++.....
T Consensus 134 -~~----~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 134 -RG----LLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp -TT----THHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred -CC----cHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 11 4566778885 5799999999987753
No 432
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.08 E-value=2e-07 Score=95.77 Aligned_cols=128 Identities=15% Similarity=0.220 Sum_probs=85.9
Q ss_pred hHHHhhhcchhhHhhhcCC-ceEEEEeecCCC-CCceEEEeec----cc---ccchh-hhhhhcccCCcch---hhhhhh
Q 007128 461 NLMDMKAHLGSFAAALKEK-DVWVMSVVPEDG-PNTLKLIYDR----GL---IGSIH-NWCEAYSTYPRTY---DLLHAW 527 (617)
Q Consensus 461 ~vLD~g~G~G~fa~~L~~~-~~~v~~v~~~~~-~~~l~~~~~r----gl---~~~~~-~~~e~~~~~p~tf---Dlvh~~ 527 (617)
+|||+|||+|.++..|+.. +. +|+.+|. +.+++.|.++ |+ +-.++ ++.+. .+.+| |+|.++
T Consensus 126 ~vLDlG~GsG~~~~~la~~~~~---~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~---~~~~f~~~D~Ivsn 199 (284)
T 1nv8_A 126 TVADIGTGSGAIGVSVAKFSDA---IVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---FKEKFASIEMILSN 199 (284)
T ss_dssp EEEEESCTTSHHHHHHHHHSSC---EEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---GGGGTTTCCEEEEC
T ss_pred EEEEEeCchhHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh---cccccCCCCEEEEc
Confidence 6999999999999999876 44 5666674 5777766554 33 22222 34333 23689 999885
Q ss_pred hhhh-----------hhh----hcCCCcccchhhcc-ccccCcceEEEecChhHHHHHHHhhhhcccccccccccCCCCC
Q 007128 528 TVFS-----------DIE----KRGCSGEDLLLEMD-RILRPTGFVIIRDKQSVVDFVKKYLRALNWEAVATTADASSDS 591 (617)
Q Consensus 528 ~~~~-----------~~~----~~~c~~~~~l~Em~-RiLrPgG~~ii~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 591 (617)
--+. |-. ...++-..++.++. +.|+|||++++.......+.+.+++... +. ..| .
T Consensus 200 PPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q~~~v~~~~~~~--~~---~~D--~-- 270 (284)
T 1nv8_A 200 PPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQVEELKKIVSDT--VF---LKD--S-- 270 (284)
T ss_dssp CCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTCHHHHTTTSTTC--EE---EEC--T--
T ss_pred CCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHHhC--Ce---ecc--c--
Confidence 1110 000 02234457899999 9999999999988887777888888775 32 333 2
Q ss_pred CCCCCeEEEEEEec
Q 007128 592 DKDGDEVVFIVQKK 605 (617)
Q Consensus 592 ~~~~~~~~l~~~K~ 605 (617)
.+.+++++++++
T Consensus 271 --~g~~R~~~~~~k 282 (284)
T 1nv8_A 271 --AGKYRFLLLNRR 282 (284)
T ss_dssp --TSSEEEEEEECC
T ss_pred --CCCceEEEEEEc
Confidence 456788888765
No 433
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.08 E-value=4.6e-08 Score=92.41 Aligned_cols=98 Identities=12% Similarity=0.153 Sum_probs=64.0
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc---ccchh-hhhhhcccC---Ccchhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL---IGSIH-NWCEAYSTY---PRTYDLLHAW 527 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl---~~~~~-~~~e~~~~~---p~tfDlvh~~ 527 (617)
.+|||+|||+|.++..+++++. ..|+.+|. +.+++.+.++ |+ +-.++ |+.+..+.+ +.+||+|.++
T Consensus 46 ~~vLD~GcG~G~~~~~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~ 123 (187)
T 2fhp_A 46 GMALDLYSGSGGLAIEAVSRGM--DKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLD 123 (187)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCEEEeCCccCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEEC
Confidence 3699999999999998887653 14666664 5666655443 22 11111 222222211 3789999987
Q ss_pred hhhhhhhhcCCCcccchhhc--cccccCcceEEEecChh
Q 007128 528 TVFSDIEKRGCSGEDLLLEM--DRILRPTGFVIIRDKQS 564 (617)
Q Consensus 528 ~~~~~~~~~~c~~~~~l~Em--~RiLrPgG~~ii~~~~~ 564 (617)
..|.. . +...++.++ .|+|||||.+++.....
T Consensus 124 ~~~~~-~----~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 124 PPYAK-Q----EIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp CCGGG-C----CHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCCCc-h----hHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 76541 1 455677777 99999999999987653
No 434
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.07 E-value=1.9e-07 Score=94.49 Aligned_cols=109 Identities=13% Similarity=0.141 Sum_probs=70.3
Q ss_pred hhHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CCceEEEeec-----c-cccchhhhhhhcc--cC-Ccchhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PNTLKLIYDR-----G-LIGSIHNWCEAYS--TY-PRTYDLLHA 526 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~~l~~~~~r-----g-l~~~~~~~~e~~~--~~-p~tfDlvh~ 526 (617)
.+|||+|||+|.++.+|++. +. .|+.+|. +.+++.|.++ | +...+.-.+.++. .+ +.+||+|.+
T Consensus 101 ~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~ 177 (280)
T 1i9g_A 101 ARVLEAGAGSGALTLSLLRAVGPAG---QVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVL 177 (280)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEE
T ss_pred CEEEEEcccccHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEE
Confidence 36999999999999999875 44 4666664 5666666554 3 1111111111211 13 378999987
Q ss_pred hhhhhhhhhcCCCcccchhhccccccCcceEEEecCh-hHHHHHHHhhhh-ccccc
Q 007128 527 WTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ-SVVDFVKKYLRA-LNWEA 580 (617)
Q Consensus 527 ~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~-~~~~~~~~~~~~-~~w~~ 580 (617)
+ +. +...+|.++.|+|||||.+++..+. ..+.++...+.. .+|..
T Consensus 178 ~-----~~----~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~~ 224 (280)
T 1i9g_A 178 D-----ML----APWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWTE 224 (280)
T ss_dssp E-----SS----CGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBCC
T ss_pred C-----Cc----CHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcCC
Confidence 2 22 5668999999999999999997764 344444444444 55654
No 435
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.06 E-value=1e-07 Score=105.15 Aligned_cols=97 Identities=12% Similarity=0.102 Sum_probs=64.1
Q ss_pred hhhHHHhhhcchhhHhhhcCCceEEEEeecCCCCCceEEEeec----cc---ccchhhhhhhcccCCcchhhhhhhhhhh
Q 007128 459 LRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDGPNTLKLIYDR----GL---IGSIHNWCEAYSTYPRTYDLLHAWTVFS 531 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~~~~l~~~~~r----gl---~~~~~~~~e~~~~~p~tfDlvh~~~~~~ 531 (617)
-.+|||+|||+|.++..+++.+.. .|+.+|...+++.|.++ |+ +-.++.-.+.+ .+|..||+|.+..++.
T Consensus 159 ~~~VLDiGcGtG~la~~la~~~~~--~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~-~~~~~fD~Ivs~~~~~ 235 (480)
T 3b3j_A 159 DKIVLDVGCGSGILSFFAAQAGAR--KIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEV-SLPEQVDIIISEPMGY 235 (480)
T ss_dssp TCEEEEESCSTTHHHHHHHHTTCS--EEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTC-CCSSCEEEEECCCCHH
T ss_pred CCEEEEecCcccHHHHHHHHcCCC--EEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhC-ccCCCeEEEEEeCchH
Confidence 357999999999999999887541 45555542366555443 44 22222111222 2458899999987766
Q ss_pred hhhhcCCCcccchhhccccccCcceEEEe
Q 007128 532 DIEKRGCSGEDLLLEMDRILRPTGFVIIR 560 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~RiLrPgG~~ii~ 560 (617)
++... ++...+.++.|+|||||.+++.
T Consensus 236 ~~~~e--~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 236 MLFNE--RMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp HHTCH--HHHHHHHHGGGGEEEEEEEESC
T ss_pred hcCcH--HHHHHHHHHHHhcCCCCEEEEE
Confidence 55311 4456788999999999999853
No 436
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.05 E-value=2.5e-07 Score=91.59 Aligned_cols=105 Identities=11% Similarity=0.053 Sum_probs=70.5
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----ccccchhhhhhhcc-cC-C-cchhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWCEAYS-TY-P-RTYDLLHAWTVFS 531 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~e~~~-~~-p-~tfDlvh~~~~~~ 531 (617)
.+|||+|||+|.++..|++.+. +|+.+|. +.+++.|.++ |+-..+.....++. .. + ++||+|.++
T Consensus 93 ~~vldiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~---- 165 (248)
T 2yvl_A 93 KRVLEFGTGSGALLAVLSEVAG---EVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVD---- 165 (248)
T ss_dssp CEEEEECCTTSHHHHHHHHHSS---EEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEEC----
T ss_pred CEEEEeCCCccHHHHHHHHhCC---EEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEEC----
Confidence 3699999999999999998744 5667774 5676666654 22111111111211 12 3 789999862
Q ss_pred hhhhcCCCcccchhhccccccCcceEEEecCh-hHHHHHHHhhhhc
Q 007128 532 DIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ-SVVDFVKKYLRAL 576 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~-~~~~~~~~~~~~~ 576 (617)
. .+...++.++.|+|||||.+++..+. ....++...+...
T Consensus 166 -~----~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~ 206 (248)
T 2yvl_A 166 -V----REPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY 206 (248)
T ss_dssp -S----SCGGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT
T ss_pred -C----cCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh
Confidence 2 25678999999999999999998884 4555666665543
No 437
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.05 E-value=7.1e-08 Score=101.53 Aligned_cols=129 Identities=15% Similarity=0.153 Sum_probs=78.7
Q ss_pred hhHHHhhhcchhhHhhhcCCc--eEEEEeecCCC-CCceEEEeec----ccccchhhhhhhcccC-Ccchhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKD--VWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWCEAYSTY-PRTYDLLHAWTVFS 531 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~--~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~e~~~~~-p~tfDlvh~~~~~~ 531 (617)
.+|||+|||+|.++..|++.+ . .|+.+|. +.+++.+.++ |+-..++ +.++..+ +++||+|.++..|+
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~~~~---~v~~vD~s~~~l~~a~~~~~~~~~~~~~~--~~d~~~~~~~~fD~Iv~~~~~~ 272 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHSPKI---RLTLCDVSAPAVEASRATLAANGVEGEVF--ASNVFSEVKGRFDMIISNPPFH 272 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHCTTC---BCEEEESBHHHHHHHHHHHHHTTCCCEEE--ECSTTTTCCSCEEEEEECCCCC
T ss_pred CeEEEecCccCHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHhCCCCEEE--EccccccccCCeeEEEECCCcc
Confidence 369999999999999998763 3 4566664 4666655544 2211111 1122222 48999999988876
Q ss_pred hhh-hcCCCcccchhhccccccCcceEEEecChh--HHHHHHHhhhhcccccccccccCCCCCCCCCCeEEEEEEec
Q 007128 532 DIE-KRGCSGEDLLLEMDRILRPTGFVIIRDKQS--VVDFVKKYLRALNWEAVATTADASSDSDKDGDEVVFIVQKK 605 (617)
Q Consensus 532 ~~~-~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~--~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~~~K~ 605 (617)
+.. .+..+...++.++.|+|||||.++|....- ....++.+... ++. +.. ...-+|+.++|.
T Consensus 273 ~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~l~~~f~~--~~~---~~~-------~~gf~v~~~~k~ 337 (343)
T 2pjd_A 273 DGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGF--HEV---IAQ-------TGRFKVYRAIMT 337 (343)
T ss_dssp SSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSHHHHHHHHHSC--CEE---EEE-------CSSEEEEEEEC-
T ss_pred cCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHHHHHHhcCc--eEE---Eee-------CCCEEEEEEEeC
Confidence 310 011145789999999999999999875432 23334444332 222 221 345677777763
No 438
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.04 E-value=6.9e-08 Score=103.56 Aligned_cols=115 Identities=6% Similarity=-0.050 Sum_probs=73.9
Q ss_pred hhHHHhhhcchhhHhhhcCC-ceEEEEeecCCC-CCceEEEeec-----------cc-ccchhhhhhhcccCC-----cc
Q 007128 460 RNLMDMKAHLGSFAAALKEK-DVWVMSVVPEDG-PNTLKLIYDR-----------GL-IGSIHNWCEAYSTYP-----RT 520 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~-~~~v~~v~~~~~-~~~l~~~~~r-----------gl-~~~~~~~~e~~~~~p-----~t 520 (617)
..|||+|||+|.++..++.. +.. .|+.+|. +.++++|.+. |+ .+.+.-.+.++...| ..
T Consensus 175 d~VLDLGCGtG~l~l~lA~~~g~~--kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~~ 252 (438)
T 3uwp_A 175 DLFVDLGSGVGQVVLQVAAATNCK--HHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIAN 252 (438)
T ss_dssp CEEEEESCTTSHHHHHHHHHCCCS--EEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHHT
T ss_pred CEEEEeCCCCCHHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccccCC
Confidence 35999999999999888753 432 3566664 4565555431 22 011221222222222 47
Q ss_pred hhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecChhHH------HHHHHhhhhcccccc
Q 007128 521 YDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQSVV------DFVKKYLRALNWEAV 581 (617)
Q Consensus 521 fDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~~~------~~~~~~~~~~~w~~~ 581 (617)
||+|.++.++- .. ++...|.||.|+|||||.||+.+..... ..+..+...++++.+
T Consensus 253 aDVVf~Nn~~F-~p----dl~~aL~Ei~RvLKPGGrIVssE~f~p~d~~i~~rnl~di~~il~v~el 314 (438)
T 3uwp_A 253 TSVIFVNNFAF-GP----EVDHQLKERFANMKEGGRIVSSKPFAPLNFRINSRNLSDIGTIMRVVEL 314 (438)
T ss_dssp CSEEEECCTTC-CH----HHHHHHHHHHTTSCTTCEEEESSCSSCTTCCCCSSSTTSGGGSEEEEEC
T ss_pred ccEEEEccccc-Cc----hHHHHHHHHHHcCCCCcEEEEeecccCCCCCCCcccccChhhhheeeec
Confidence 89998765542 22 5678999999999999999999887632 235667788887764
No 439
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.03 E-value=9.4e-08 Score=95.58 Aligned_cols=103 Identities=17% Similarity=0.185 Sum_probs=65.4
Q ss_pred hhHHHhhhcchhhHhhhcCC--ceEEEEeecCCC-CCceEEEeec-------cc--------------------------
Q 007128 460 RNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDG-PNTLKLIYDR-------GL-------------------------- 503 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~-~~~l~~~~~r-------gl-------------------------- 503 (617)
.+|||+|||+|.++..|++. .. ..+|+.+|. +.+++.|.++ |+
T Consensus 53 ~~vLD~gcGsG~~~~~la~~~~~~-~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (250)
T 1o9g_A 53 VTLWDPCCGSGYLLTVLGLLHRRS-LRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQAA 131 (250)
T ss_dssp EEEEETTCTTSHHHHHHHHHTGGG-EEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CeEEECCCCCCHHHHHHHHHhccC-CCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhhh
Confidence 46999999999999999875 11 236778885 6777766533 22
Q ss_pred --cc-------------ch-hhhhhhccc--C-C-cchhhhhhhhhhhhhhhc-----CCCcccchhhccccccCcceEE
Q 007128 504 --IG-------------SI-HNWCEAYST--Y-P-RTYDLLHAWTVFSDIEKR-----GCSGEDLLLEMDRILRPTGFVI 558 (617)
Q Consensus 504 --~~-------------~~-~~~~e~~~~--~-p-~tfDlvh~~~~~~~~~~~-----~c~~~~~l~Em~RiLrPgG~~i 558 (617)
+. .. .|..+.++. . + .+||+|.|+..|.+.... ......++.++.|+|||||+++
T Consensus 132 ~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 211 (250)
T 1o9g_A 132 RRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIA 211 (250)
T ss_dssp HHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred hhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEE
Confidence 11 11 122222110 0 3 489999998666543210 0123478999999999999999
Q ss_pred EecCh
Q 007128 559 IRDKQ 563 (617)
Q Consensus 559 i~~~~ 563 (617)
+.+..
T Consensus 212 ~~~~~ 216 (250)
T 1o9g_A 212 VTDRS 216 (250)
T ss_dssp EEESS
T ss_pred EeCcc
Confidence 95543
No 440
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.02 E-value=1.2e-07 Score=94.02 Aligned_cols=92 Identities=14% Similarity=0.161 Sum_probs=59.7
Q ss_pred hhHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CCceEEEeec----cc---ccchh-hhhhhccc-----------
Q 007128 460 RNLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PNTLKLIYDR----GL---IGSIH-NWCEAYST----------- 516 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~~l~~~~~r----gl---~~~~~-~~~e~~~~----------- 516 (617)
.+|||+|||+|.++..|++. +. .|+.+|. +.+++.|.++ |+ +-.+. +..+.++.
T Consensus 62 ~~VLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 62 KRIIEIGTFTGYSSLCFASALPEDG---KILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp SEEEEECCTTCHHHHHHHHHSCTTC---EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred CEEEEEeCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 46999999999999999875 34 4555553 4555555443 32 11111 11111111
Q ss_pred --C--C-cchhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEec
Q 007128 517 --Y--P-RTYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRD 561 (617)
Q Consensus 517 --~--p-~tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~ 561 (617)
| + .+||+|.++.... +...++.++.++|||||.+++.+
T Consensus 139 ~~f~~~~~~fD~I~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDADKE-------NYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TTTCCSTTCEEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccCCCCCcCEEEEeCCHH-------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 1 2 6899998765443 34578999999999999999976
No 441
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.01 E-value=2.4e-07 Score=98.86 Aligned_cols=112 Identities=13% Similarity=0.106 Sum_probs=67.8
Q ss_pred HHHHHHhhccccCccchhhHHHhhhcchhhHhhhcCCceEEEEeecCCCCCceEEEe----eccc---ccchhhhhhhcc
Q 007128 443 VDSYWNLLSPKIQSNSLRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDGPNTLKLIY----DRGL---IGSIHNWCEAYS 515 (617)
Q Consensus 443 V~~y~~~l~~~i~~~~~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~~~~l~~~~----~rgl---~~~~~~~~e~~~ 515 (617)
...|.+.|......-+=..|||||||+|.++...++.|.. .|.++|..+++..|. ..|+ |-.++.-.+.+.
T Consensus 68 t~aY~~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~--~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~ 145 (376)
T 4hc4_A 68 TDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGAR--RVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVE 145 (376)
T ss_dssp HHHHHHHHHTTHHHHTTCEEEEETCTTSHHHHHHHHTTCS--EEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCC
T ss_pred HHHHHHHHHhCHHhcCCCEEEEeCCCccHHHHHHHHhCCC--EEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeec
Confidence 3456665532111111224999999999998877777652 233444334544443 3355 444554444443
Q ss_pred cCCcchhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEE
Q 007128 516 TYPRTYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVI 558 (617)
Q Consensus 516 ~~p~tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~i 558 (617)
.|..||+|.+.-+...+. +...+..++...+|.|||||.++
T Consensus 146 -lpe~~DvivsE~~~~~l~-~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 146 -LPEQVDAIVSEWMGYGLL-HESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp -CSSCEEEEECCCCBTTBT-TTCSHHHHHHHHHHHEEEEEEEE
T ss_pred -CCccccEEEeeccccccc-ccchhhhHHHHHHhhCCCCceEC
Confidence 578999998743333222 33356788888999999999986
No 442
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.01 E-value=1.9e-07 Score=95.72 Aligned_cols=138 Identities=12% Similarity=0.080 Sum_probs=76.0
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec-----cc-----------ccchh-hhhhhcccCCcch
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR-----GL-----------IGSIH-NWCEAYSTYPRTY 521 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r-----gl-----------~~~~~-~~~e~~~~~p~tf 521 (617)
++|||+|||+|+++..+++.+. .+|+.+|. +.+++.|.++ |+ +-.++ |-.+-+.. +++|
T Consensus 77 ~~VLdiG~G~G~~~~~l~~~~~--~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~f 153 (281)
T 1mjf_A 77 KRVLVIGGGDGGTVREVLQHDV--DEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGF 153 (281)
T ss_dssp CEEEEEECTTSHHHHHHTTSCC--SEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCE
T ss_pred CeEEEEcCCcCHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCCe
Confidence 5799999999999999998743 25666664 4565555433 11 11111 11111122 5889
Q ss_pred hhhhhhhhhhhhhhcCCC--cccchhhccccccCcceEEEecC-----hhHHHHHHHhhhhcccccccccccCCCCCCCC
Q 007128 522 DLLHAWTVFSDIEKRGCS--GEDLLLEMDRILRPTGFVIIRDK-----QSVVDFVKKYLRALNWEAVATTADASSDSDKD 594 (617)
Q Consensus 522 Dlvh~~~~~~~~~~~~c~--~~~~l~Em~RiLrPgG~~ii~~~-----~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 594 (617)
|+|.++...+ .. ..-. ...++.++.|+|||||.+++... ......+.+.++.. +..+ .....-...+ .
T Consensus 154 D~Ii~d~~~~-~~-~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-f~~v-~~~~~~vP~~-~ 228 (281)
T 1mjf_A 154 DVIIADSTDP-VG-PAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKV-FDRV-YYYSFPVIGY-A 228 (281)
T ss_dssp EEEEEECCCC-C------TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHH-CSEE-EEEEECCTTS-S
T ss_pred eEEEECCCCC-CC-cchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHH-CCce-EEEEEecCCC-C
Confidence 9999754432 11 0001 25689999999999999999632 22333333333332 2211 1111001111 3
Q ss_pred CCeEEEEEEec
Q 007128 595 GDEVVFIVQKK 605 (617)
Q Consensus 595 ~~~~~l~~~K~ 605 (617)
+...+++|.|.
T Consensus 229 g~~~~~~as~~ 239 (281)
T 1mjf_A 229 SPWAFLVGVKG 239 (281)
T ss_dssp SSEEEEEEEES
T ss_pred ceEEEEEeeCC
Confidence 45778889886
No 443
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=97.99 E-value=4.1e-07 Score=92.97 Aligned_cols=145 Identities=10% Similarity=0.067 Sum_probs=80.4
Q ss_pred chhhHHHhhhcchhhHhhhcCC-ceEEEEeecCCC-CCceEEEeec------cc----ccchh-hhhhhcccCCcchhhh
Q 007128 458 SLRNLMDMKAHLGSFAAALKEK-DVWVMSVVPEDG-PNTLKLIYDR------GL----IGSIH-NWCEAYSTYPRTYDLL 524 (617)
Q Consensus 458 ~~r~vLD~g~G~G~fa~~L~~~-~~~v~~v~~~~~-~~~l~~~~~r------gl----~~~~~-~~~e~~~~~p~tfDlv 524 (617)
.-++|||+|||+|+++..++++ ++ ..|+.+|. +.+++.|.+. ++ +-.++ |-.+-+...+++||+|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~I 152 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSV--KKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI 152 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTC--SEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCC--ceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEE
Confidence 3467999999999999999987 43 24555553 5666655543 11 11111 1111122234899999
Q ss_pred hhhhhhhhhhhcCCCcccchhhccccccCcceEEEecCh-----hHHHHHHHhhhhcccccccccccCCCCCCCCCCeEE
Q 007128 525 HAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ-----SVVDFVKKYLRALNWEAVATTADASSDSDKDGDEVV 599 (617)
Q Consensus 525 h~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~-----~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 599 (617)
.++...+........-..++.++.|+|||||.+++.... .....+.+.+++. +..+ ..........+.+...+
T Consensus 153 i~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v-~~~~~~vp~~~~g~w~~ 230 (275)
T 1iy9_A 153 MVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEI-FPIT-KLYTANIPTYPSGLWTF 230 (275)
T ss_dssp EESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT-CSEE-EEEEECCTTSGGGCEEE
T ss_pred EECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHh-CCCe-EEEEEecCcccCcceEE
Confidence 985443211100011257899999999999999997432 2233344444433 2221 21110011122346788
Q ss_pred EEEEecc
Q 007128 600 FIVQKKI 606 (617)
Q Consensus 600 l~~~K~~ 606 (617)
++|.|++
T Consensus 231 ~~ask~~ 237 (275)
T 1iy9_A 231 TIGSKKY 237 (275)
T ss_dssp EEEESSC
T ss_pred EEeeCCC
Confidence 8999873
No 444
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=97.99 E-value=2.8e-07 Score=90.33 Aligned_cols=93 Identities=18% Similarity=0.091 Sum_probs=60.9
Q ss_pred hhHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CCceEEEeec----cc---ccchh-hhhhhcccCC-----cchh
Q 007128 460 RNLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PNTLKLIYDR----GL---IGSIH-NWCEAYSTYP-----RTYD 522 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~~l~~~~~r----gl---~~~~~-~~~e~~~~~p-----~tfD 522 (617)
.+|||+|||+|.++..|++. +. .|+.+|. +.+++.+.++ |+ +-.++ +..+.++.++ ++||
T Consensus 71 ~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 71 KKALDLGTFTGYSALALALALPADG---RVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTC---EEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 47999999999999999875 44 4555553 5666655543 33 11111 2212222222 6899
Q ss_pred hhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecC
Q 007128 523 LLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDK 562 (617)
Q Consensus 523 lvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~ 562 (617)
+|+++.. ..+...++.++.|+|||||.+++.+.
T Consensus 148 ~v~~d~~-------~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 148 VAVVDAD-------KENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EEEECSC-------STTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEECCC-------HHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 9987433 22456789999999999999999654
No 445
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=97.98 E-value=5.7e-07 Score=92.86 Aligned_cols=143 Identities=8% Similarity=0.017 Sum_probs=77.5
Q ss_pred hhHHHhhhcchhhHhhhcCC-ceEEEEeecCCC-CCceEEEeecc------c----ccchh-hhhhhcccCCcchhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK-DVWVMSVVPEDG-PNTLKLIYDRG------L----IGSIH-NWCEAYSTYPRTYDLLHA 526 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~-~~~v~~v~~~~~-~~~l~~~~~rg------l----~~~~~-~~~e~~~~~p~tfDlvh~ 526 (617)
.+|||+|||+|+++..+++. ++ .+|+.+|. +.+++.+.++- + +-.++ |..+.+...+++||+|.+
T Consensus 92 ~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 92 KKVLIIGGGDGGTLREVLKHDSV--EKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp CEEEEEECTTCHHHHHHTTSTTC--SEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CEEEEEcCCcCHHHHHHHhcCCC--CEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 57999999999999999987 33 25666664 56666554431 1 11111 111112223488999997
Q ss_pred hhhhhhhhh-cCCCcccchhhccccccCcceEEEecCh-----hHHHHHHHhhhhcccccccccccCCCCCCCCCCeEEE
Q 007128 527 WTVFSDIEK-RGCSGEDLLLEMDRILRPTGFVIIRDKQ-----SVVDFVKKYLRALNWEAVATTADASSDSDKDGDEVVF 600 (617)
Q Consensus 527 ~~~~~~~~~-~~c~~~~~l~Em~RiLrPgG~~ii~~~~-----~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l 600 (617)
+...+.+.. ..-....++.++.|+|||||.+++.... .....+.+.+.+. +..+ ..........+.+...++
T Consensus 170 d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v-~~~~~~vp~~p~g~~~f~ 247 (296)
T 1inl_A 170 DSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKV-FPIT-RVYLGFMTTYPSGMWSYT 247 (296)
T ss_dssp EC----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHH-CSEE-EEEEEECTTSTTSEEEEE
T ss_pred cCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHH-CCce-EEEEeecCccCCCceEEE
Confidence 532220110 0011257899999999999999997432 2223333333332 2221 211100112224567788
Q ss_pred EEEecc
Q 007128 601 IVQKKI 606 (617)
Q Consensus 601 ~~~K~~ 606 (617)
+|.|++
T Consensus 248 ~as~~~ 253 (296)
T 1inl_A 248 FASKGI 253 (296)
T ss_dssp EEESSC
T ss_pred EecCCC
Confidence 999874
No 446
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=97.98 E-value=9.4e-07 Score=96.37 Aligned_cols=117 Identities=15% Similarity=0.106 Sum_probs=79.9
Q ss_pred hHHHHHHhHhcCCCCCCCCCCceeEEEeeccccccccccccc-----------------chhhhhccCCCccchhhhHHH
Q 007128 193 KYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLS-----------------SDVITMSLAPNDVHQNQIQFA 255 (617)
Q Consensus 193 ~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~-----------------~~V~gvDis~~dl~~a~~~~a 255 (617)
...+.+.+++.. .. +.+|||.|||+|.++..+++ ..++|+|+++.++..++....
T Consensus 158 ~v~~~mv~~l~~------~~--~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~ 229 (445)
T 2okc_A 158 PLIQAMVDCINP------QM--GETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY 229 (445)
T ss_dssp HHHHHHHHHHCC------CT--TCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC------CC--CCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH
Confidence 455666666643 22 36899999999998877654 248899998877766664333
Q ss_pred HHhCC---CcccccccccccCCCCCcccccccccccccccc-cc---------------ceEEEEecccccCCceeeecC
Q 007128 256 LERGI---PAYLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ-RD---------------GILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 256 ~~rg~---~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~~-~~---------------~~~L~el~RvLrPGG~lvis~ 316 (617)
.+++ ...+..+|+...+.. .+||+|+++--+.+... .. ..++..+.+.|+|||++++..
T Consensus 230 -l~g~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 230 -LHGIGTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp -HTTCCSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -HhCCCcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 3455 567777887776654 48999998743322111 00 135788899999999999987
Q ss_pred hhh
Q 007128 317 PEA 319 (617)
Q Consensus 317 p~~ 319 (617)
|..
T Consensus 308 p~~ 310 (445)
T 2okc_A 308 PDN 310 (445)
T ss_dssp EHH
T ss_pred CCc
Confidence 764
No 447
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=97.97 E-value=1.2e-07 Score=96.94 Aligned_cols=116 Identities=13% Similarity=0.110 Sum_probs=71.2
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC--CCceEEEeec---------cc-------ccc-hhhhhhhcccC---
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG--PNTLKLIYDR---------GL-------IGS-IHNWCEAYSTY--- 517 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~--~~~l~~~~~r---------gl-------~~~-~~~~~e~~~~~--- 517 (617)
.+|||+|||+|.++..|+..+.. .|+.+|. +.+++.|.++ |+ +-. ..+|......+
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~~~--~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 158 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAGAD--QVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRC 158 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTTCS--EEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHH
T ss_pred CeEEEecccccHHHHHHHHcCCC--EEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhh
Confidence 46999999999999999887641 3444443 2444443332 11 111 12354322111
Q ss_pred --CcchhhhhhhhhhhhhhhcCCCcccchhhcccccc---C--cceEEEe-cChh-----HHHHHHHhhhhcc-cccc
Q 007128 518 --PRTYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILR---P--TGFVIIR-DKQS-----VVDFVKKYLRALN-WEAV 581 (617)
Q Consensus 518 --p~tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLr---P--gG~~ii~-~~~~-----~~~~~~~~~~~~~-w~~~ 581 (617)
+.+||+|.+..++.|.. +...++.++.|+|| | ||.+++. .+.. ...++.+.++..+ |+..
T Consensus 159 ~~~~~fD~Ii~~dvl~~~~----~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f~v~ 232 (281)
T 3bzb_A 159 TGLQRFQVVLLADLLSFHQ----AHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAERDLAFFRLVNADGALIAE 232 (281)
T ss_dssp HSCSSBSEEEEESCCSCGG----GHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------CTHHHHHHHHSTTEEEE
T ss_pred ccCCCCCEEEEeCcccChH----HHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchhHHHHHHHHHhcCCEEEE
Confidence 37899999877776554 57789999999999 9 9976543 2211 1234555666667 7763
No 448
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=97.97 E-value=5e-07 Score=89.56 Aligned_cols=93 Identities=16% Similarity=0.180 Sum_probs=60.6
Q ss_pred hhHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CCceEEEeec----cc---ccchh-hhhhhcccCC-----cchh
Q 007128 460 RNLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PNTLKLIYDR----GL---IGSIH-NWCEAYSTYP-----RTYD 522 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~~l~~~~~r----gl---~~~~~-~~~e~~~~~p-----~tfD 522 (617)
++|||+|||+|.++..|++. +. .|+.+|. +.+++.|.++ |+ +-.+. +..+.++.++ ++||
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~~~~---~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLPPDG---QIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTC---EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 47999999999999999875 34 3555553 4565555443 33 11111 2222222222 6899
Q ss_pred hhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecC
Q 007128 523 LLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDK 562 (617)
Q Consensus 523 lvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~ 562 (617)
+|+++.... +...++.++.|+|||||++++.+.
T Consensus 151 ~V~~d~~~~-------~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 151 LIFIDADKR-------NYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp EEEECSCGG-------GHHHHHHHHHHTEEEEEEEEEECT
T ss_pred EEEECCCHH-------HHHHHHHHHHHHcCCCeEEEEeCC
Confidence 998754422 446789999999999999999654
No 449
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.96 E-value=1e-06 Score=89.26 Aligned_cols=102 Identities=17% Similarity=0.196 Sum_probs=62.3
Q ss_pred eEEEeecccccccccccccc----hhhhhccCCCccchhhhHHHHHhCCCcccccccccccCCCCCcccccccccc---c
Q 007128 216 RTVLDVGCGVASFGAYLLSS----DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRC---R 288 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~----~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~~lpf~~~sFDlV~~s~~---l 288 (617)
.+|||+|||+|.|+..++++ .+.++|+.. ++....+.. ...+.++.....+++...++++.||+|+|..+ -
T Consensus 76 ~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGv-Dl~~~pi~~-~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~apnsG 153 (277)
T 3evf_A 76 GRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGR-DGHEKPMNV-QSLGWNIITFKDKTDIHRLEPVKCDTLLCDIGESSS 153 (277)
T ss_dssp EEEEEETCTTCHHHHHHHTSTTEEEEEEECCCC-TTCCCCCCC-CBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCCCS
T ss_pred CEEEEecCCCCHHHHHHHHhcCCCcceeEEEec-cCccccccc-CcCCCCeEEEeccceehhcCCCCccEEEecCccCcC
Confidence 58999999999999977654 355666653 222111100 01122333333444445677789999998653 2
Q ss_pred cccccccc--eEEEEecccccCC-ceeeecChhh
Q 007128 289 IDWLQRDG--ILLLELDRLLRPG-GYFAYSSPEA 319 (617)
Q Consensus 289 ~h~~~~~~--~~L~el~RvLrPG-G~lvis~p~~ 319 (617)
.++.+... .+|..+.++|+|| |.|++..+..
T Consensus 154 ~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~p 187 (277)
T 3evf_A 154 SSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAP 187 (277)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred chHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCC
Confidence 22433321 2467788999999 9999976553
No 450
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=97.94 E-value=2.5e-07 Score=97.79 Aligned_cols=103 Identities=11% Similarity=0.025 Sum_probs=65.8
Q ss_pred ceeEEEeecccccccccccccc---hhhhhccCCCccchhhhHHHHHh--------CCCcccccccccccCC----CCCc
Q 007128 214 RLRTVLDVGCGVASFGAYLLSS---DVITMSLAPNDVHQNQIQFALER--------GIPAYLGVLGTKRLPY----PSRS 278 (617)
Q Consensus 214 ~~~~VLDVGCG~G~~~~~L~~~---~V~gvDis~~dl~~a~~~~a~~r--------g~~~~~~~~d~~~lpf----~~~s 278 (617)
.+++|||||||+|.++..++++ .|+++|+++..+..++..+.... +..+.+..+|+....- .+++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 4579999999999999988765 48888888877666653322110 0135666777655321 3578
Q ss_pred ccccccccccccccccc-----ceEEEEe----cccccCCceeeecC
Q 007128 279 FELAHCSRCRIDWLQRD-----GILLLEL----DRLLRPGGYFAYSS 316 (617)
Q Consensus 279 FDlV~~s~~l~h~~~~~-----~~~L~el----~RvLrPGG~lvis~ 316 (617)
||+|++...-.+....+ ..+++.+ .++|+|||++++-.
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 99998753211111111 1244555 89999999999864
No 451
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=97.94 E-value=1.1e-07 Score=95.63 Aligned_cols=93 Identities=13% Similarity=0.074 Sum_probs=61.8
Q ss_pred hhhHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CCceEEEeec----cc---ccchh-hhhhhcccC------Ccc
Q 007128 459 LRNLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PNTLKLIYDR----GL---IGSIH-NWCEAYSTY------PRT 520 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~~l~~~~~r----gl---~~~~~-~~~e~~~~~------p~t 520 (617)
-++|||+|||+|.++..|++. +. .|+.+|. +.+++.|.++ |+ +-.++ +..+.++.+ +.+
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~---~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDG---KILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS 156 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTC---EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence 357999999999999999864 44 4555563 5666665543 33 11111 222222222 478
Q ss_pred hhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEec
Q 007128 521 YDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRD 561 (617)
Q Consensus 521 fDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~ 561 (617)
||+|.++.... +...++.++.|+|||||.+++.+
T Consensus 157 fD~V~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 157 YDFIFVDADKD-------NYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp BSEEEECSCST-------THHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEEcCchH-------HHHHHHHHHHHhCCCCeEEEEec
Confidence 99998753321 45678999999999999999876
No 452
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=97.93 E-value=2.4e-07 Score=97.39 Aligned_cols=114 Identities=15% Similarity=0.162 Sum_probs=71.8
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc----ccchh-hhhhhcccC---Ccchhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL----IGSIH-NWCEAYSTY---PRTYDLLHA 526 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl----~~~~~-~~~e~~~~~---p~tfDlvh~ 526 (617)
.+|||+|||+|+|+..++..+. .|+.+|. +.+++.|.++ |+ +-.++ |..+.+... .++||+|.+
T Consensus 155 ~~VLDlgcGtG~~sl~la~~ga---~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~ 231 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAAGA---EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILT 231 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEE
T ss_pred CcEEEcccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEE
Confidence 3699999999999999999876 6777775 5777666554 22 11111 111111111 368999987
Q ss_pred hh----------hhhhhhhcCCCcccchhhccccccCcceEEEecChh-------HHHHHHHhhhhccccc
Q 007128 527 WT----------VFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS-------VVDFVKKYLRALNWEA 580 (617)
Q Consensus 527 ~~----------~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~-------~~~~~~~~~~~~~w~~ 580 (617)
+- ++.... +...++.++.|+|||||++++..... ..+.+++.+...+++.
T Consensus 232 dPP~~~~~~~~~~~~~~~----~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v 298 (332)
T 2igt_A 232 DPPKFGRGTHGEVWQLFD----HLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVV 298 (332)
T ss_dssp CCCSEEECTTCCEEEHHH----HHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEE
T ss_pred CCccccCCchHHHHHHHH----HHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeE
Confidence 32 122222 35678999999999999977755432 3334555666666655
No 453
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.91 E-value=2.6e-07 Score=96.25 Aligned_cols=118 Identities=17% Similarity=0.126 Sum_probs=71.3
Q ss_pred hhHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CCceEEEeec----cc--ccchhhhhhhcccCCcchhhhhhhh-
Q 007128 460 RNLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PNTLKLIYDR----GL--IGSIHNWCEAYSTYPRTYDLLHAWT- 528 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~~l~~~~~r----gl--~~~~~~~~e~~~~~p~tfDlvh~~~- 528 (617)
.+|||+|||+|+++..|++. +. .|+.+|. +.+++.+.++ |+ +-.++.-.+.++.++++||+|.++-
T Consensus 120 ~~VLDlg~G~G~~t~~la~~~~~~~---~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~P 196 (315)
T 1ixk_A 120 EIVADMAAAPGGKTSYLAQLMRNDG---VIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAP 196 (315)
T ss_dssp CEEEECCSSCSHHHHHHHHHTTTCS---EEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECC
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCC---EEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCC
Confidence 36999999999999999864 23 4666774 5666666554 33 1122211222333457899998642
Q ss_pred -----hhhhhhhc--CCC----------cccchhhccccccCcceEEEecC----hhHHHHHHHhhhhccccc
Q 007128 529 -----VFSDIEKR--GCS----------GEDLLLEMDRILRPTGFVIIRDK----QSVVDFVKKYLRALNWEA 580 (617)
Q Consensus 529 -----~~~~~~~~--~c~----------~~~~l~Em~RiLrPgG~~ii~~~----~~~~~~~~~~~~~~~w~~ 580 (617)
++.+...- .-. ...+|.++.|+|||||.+++..- .+..+.++.+++...++.
T Consensus 197 csg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~~ 269 (315)
T 1ixk_A 197 CTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVEL 269 (315)
T ss_dssp TTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEEE
T ss_pred CCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCEE
Confidence 22211100 000 14789999999999999999532 233445677777766654
No 454
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=97.89 E-value=3.1e-07 Score=88.36 Aligned_cols=109 Identities=17% Similarity=0.119 Sum_probs=69.1
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecccccchhhhhhhcccCCcchhhhhhhhhhhhhhhcCC
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGLIGSIHNWCEAYSTYPRTYDLLHAWTVFSDIEKRGC 538 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl~~~~~~~~e~~~~~p~tfDlvh~~~~~~~~~~~~c 538 (617)
.+|||+|||+|.++..|+..+.. .|+.+|. +.+++.+.++-- .+...+.++..+|++||+|.++..|.+....
T Consensus 53 ~~vlD~gcG~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~--~~~~~~~d~~~~~~~~D~v~~~~p~~~~~~~-- 126 (200)
T 1ne2_A 53 RSVIDAGTGNGILACGSYLLGAE--SVTAFDIDPDAIETAKRNCG--GVNFMVADVSEISGKYDTWIMNPPFGSVVKH-- 126 (200)
T ss_dssp SEEEEETCTTCHHHHHHHHTTBS--EEEEEESCHHHHHHHHHHCT--TSEEEECCGGGCCCCEEEEEECCCC--------
T ss_pred CEEEEEeCCccHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhcC--CCEEEECcHHHCCCCeeEEEECCCchhccCc--
Confidence 46999999999999999987541 3556663 566666655421 1111222333356899999999888876421
Q ss_pred CcccchhhccccccCcceEEEecChhHHHHHHHhhhhcc
Q 007128 539 SGEDLLLEMDRILRPTGFVIIRDKQSVVDFVKKYLRALN 577 (617)
Q Consensus 539 ~~~~~l~Em~RiLrPgG~~ii~~~~~~~~~~~~~~~~~~ 577 (617)
....++.++.|+| |+.+++. +....+.+.+++...+
T Consensus 127 ~~~~~l~~~~~~~--g~~~~~~-~~~~~~~~~~~~~~~g 162 (200)
T 1ne2_A 127 SDRAFIDKAFETS--MWIYSIG-NAKARDFLRREFSARG 162 (200)
T ss_dssp -CHHHHHHHHHHE--EEEEEEE-EGGGHHHHHHHHHHHE
T ss_pred hhHHHHHHHHHhc--CcEEEEE-cCchHHHHHHHHHHCC
Confidence 2346788888888 5544444 5566677778777775
No 455
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=97.87 E-value=2.2e-07 Score=96.66 Aligned_cols=93 Identities=14% Similarity=0.061 Sum_probs=61.5
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----ccccchhhhhhhccc---CCcchhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWCEAYST---YPRTYDLLHAWTVFS 531 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~e~~~~---~p~tfDlvh~~~~~~ 531 (617)
.+|||+|||+|.++..|++.+..-..|+.+|. +++++.|.++ |+- .+...+.++.. -+.+||+|.+..++.
T Consensus 77 ~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~-~v~~~~~d~~~~~~~~~~fD~Iv~~~~~~ 155 (317)
T 1dl5_A 77 MRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE-NVIFVCGDGYYGVPEFSPYDVIFVTVGVD 155 (317)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGGCCEEEEEECSBBS
T ss_pred CEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEECChhhccccCCCeEEEEEcCCHH
Confidence 47999999999999999876331012555553 5676666555 331 12111122211 137899999988877
Q ss_pred hhhhcCCCcccchhhccccccCcceEEEecCh
Q 007128 532 DIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
|+. .++.++|||||.+++....
T Consensus 156 ~~~----------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 156 EVP----------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp CCC----------HHHHHHEEEEEEEEEEBCB
T ss_pred HHH----------HHHHHhcCCCcEEEEEECC
Confidence 542 5788999999999997654
No 456
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=97.84 E-value=2.9e-07 Score=89.38 Aligned_cols=91 Identities=18% Similarity=0.126 Sum_probs=61.3
Q ss_pred hhHHHhhhcchhhHhhhcCCc---eEEEEeecCCC-CCceEEEeec----cc--ccchh-hhhhhcccCCcchhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKD---VWVMSVVPEDG-PNTLKLIYDR----GL--IGSIH-NWCEAYSTYPRTYDLLHAWT 528 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~---~~v~~v~~~~~-~~~l~~~~~r----gl--~~~~~-~~~e~~~~~p~tfDlvh~~~ 528 (617)
.+|||+|||+|.++..|++.. . +|+.+|. +.+++.+.++ |+ +-..+ +..+.++ -+.+||+|++..
T Consensus 79 ~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~ 154 (215)
T 2yxe_A 79 MKVLEIGTGCGYHAAVTAEIVGEDG---LVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE-PLAPYDRIYTTA 154 (215)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG-GGCCEEEEEESS
T ss_pred CEEEEECCCccHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC-CCCCeeEEEECC
Confidence 479999999999999998764 4 4555553 5666666554 22 11111 2222222 137899999988
Q ss_pred hhhhhhhcCCCcccchhhccccccCcceEEEecChh
Q 007128 529 VFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS 564 (617)
Q Consensus 529 ~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~ 564 (617)
++.++. .++.|+|||||.+++.....
T Consensus 155 ~~~~~~----------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 155 AGPKIP----------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp BBSSCC----------HHHHHTEEEEEEEEEEESSS
T ss_pred chHHHH----------HHHHHHcCCCcEEEEEECCC
Confidence 777543 48899999999999987654
No 457
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.84 E-value=2.9e-06 Score=87.34 Aligned_cols=130 Identities=12% Similarity=0.078 Sum_probs=73.2
Q ss_pred hhHHHhhh------cchh-hHhhhcCCceEEEEeecCCCCCceEEEeeccccc-chhhhhhhcccCCcchhhhhhhhhhh
Q 007128 460 RNLMDMKA------HLGS-FAAALKEKDVWVMSVVPEDGPNTLKLIYDRGLIG-SIHNWCEAYSTYPRTYDLLHAWTVFS 531 (617)
Q Consensus 460 r~vLD~g~------G~G~-fa~~L~~~~~~v~~v~~~~~~~~l~~~~~rgl~~-~~~~~~e~~~~~p~tfDlvh~~~~~~ 531 (617)
.+|||+|| |+|+ .++.+...+. .|+.+|....+ + ++.- ...|+. .++ ++++||+|.++...+
T Consensus 65 ~~VLDLGcGsg~~~GpGs~~~a~~~~~~~---~V~gvDis~~v----~-~v~~~i~gD~~-~~~-~~~~fD~Vvsn~~~~ 134 (290)
T 2xyq_A 65 MRVIHFGAGSDKGVAPGTAVLRQWLPTGT---LLVDSDLNDFV----S-DADSTLIGDCA-TVH-TANKWDLIISDMYDP 134 (290)
T ss_dssp CEEEEESCCCTTSBCHHHHHHHHHSCTTC---EEEEEESSCCB----C-SSSEEEESCGG-GCC-CSSCEEEEEECCCCC
T ss_pred CEEEEeCCCCCCCCCcHHHHHHHHcCCCC---EEEEEECCCCC----C-CCEEEEECccc-cCC-ccCcccEEEEcCCcc
Confidence 36999999 5576 2333333234 35555542222 1 2211 122332 222 348999999864322
Q ss_pred hh-----h--hcCCCcccchhhccccccCcceEEEecCh-hHHHHHHHhhhhcccccccccccCCCCCCCCCCeEEEEEE
Q 007128 532 DI-----E--KRGCSGEDLLLEMDRILRPTGFVIIRDKQ-SVVDFVKKYLRALNWEAVATTADASSDSDKDGDEVVFIVQ 603 (617)
Q Consensus 532 ~~-----~--~~~c~~~~~l~Em~RiLrPgG~~ii~~~~-~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l~~~ 603 (617)
.. . .....++.++.|+.|+|||||.|++.... ....++.++++..+|..+ +..- ... .+.|.+|+|+
T Consensus 135 ~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v-~~~a--sr~--~s~e~~lv~~ 209 (290)
T 2xyq_A 135 RTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTA-FVTN--VNA--SSSEAFLIGA 209 (290)
T ss_dssp C---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEE-EEEG--GGT--TSSCEEEEEE
T ss_pred ccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEE-EEEE--cCC--CchheEEecC
Confidence 10 0 00111237899999999999999996532 233578888888877655 3431 111 3468888887
Q ss_pred e
Q 007128 604 K 604 (617)
Q Consensus 604 K 604 (617)
.
T Consensus 210 ~ 210 (290)
T 2xyq_A 210 N 210 (290)
T ss_dssp E
T ss_pred C
Confidence 6
No 458
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=97.83 E-value=6.1e-07 Score=94.67 Aligned_cols=117 Identities=18% Similarity=0.059 Sum_probs=73.3
Q ss_pred chhhHHHhhhcchhhHhhhcCCc---eEEEEeecCCC-CCceEEEeec----ccccchhhhhhh---cccCCcchhhhhh
Q 007128 458 SLRNLMDMKAHLGSFAAALKEKD---VWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWCEA---YSTYPRTYDLLHA 526 (617)
Q Consensus 458 ~~r~vLD~g~G~G~fa~~L~~~~---~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~e~---~~~~p~tfDlvh~ 526 (617)
.-..|||+|||+|+++..++... . .|+.+|. +.+++.|.++ |+- .++..+.+ ++.....||+|.+
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~~~~~---~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~~~~~~~~D~Ii~ 278 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTLGPTS---PVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLPRFFPEVDRILA 278 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHHCTTS---CEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGGGGTCCCCSEEEE
T ss_pred CCCEEEeCCCCcCHHHHHHHHhhCCCc---eEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhCccccCCCCEEEE
Confidence 34579999999999999888743 4 4566664 5676666554 331 22222223 3322267999998
Q ss_pred hhhhhhhhhc----CCCcccchhhccccccCcceEEEecChhHHHHHHHhhhhcccccc
Q 007128 527 WTVFSDIEKR----GCSGEDLLLEMDRILRPTGFVIIRDKQSVVDFVKKYLRALNWEAV 581 (617)
Q Consensus 527 ~~~~~~~~~~----~c~~~~~l~Em~RiLrPgG~~ii~~~~~~~~~~~~~~~~~~w~~~ 581 (617)
+--|...... ......++.++.|+|||||.+++..+.. +.++.+++ .+|+..
T Consensus 279 npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~--~~~~~~~~-~g~~~~ 334 (354)
T 3tma_A 279 NPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRP--ALLKRALP-PGFALR 334 (354)
T ss_dssp CCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH--HHHHHHCC-TTEEEE
T ss_pred CCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH--HHHHHHhh-cCcEEE
Confidence 5443210000 0012578999999999999998876653 23566666 888764
No 459
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.82 E-value=2.9e-07 Score=90.18 Aligned_cols=91 Identities=14% Similarity=0.105 Sum_probs=58.4
Q ss_pred hhHHHhhhcchhhHhhhcCCc---eEEEEeecCCC-CCceEEEeecc----c----ccchhhhhhhcc---cCCcchhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKD---VWVMSVVPEDG-PNTLKLIYDRG----L----IGSIHNWCEAYS---TYPRTYDLL 524 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~---~~v~~v~~~~~-~~~l~~~~~rg----l----~~~~~~~~e~~~---~~p~tfDlv 524 (617)
.+|||+|||+|.++..|++.. . .|+.+|. +.+++.+.++. + ...+...+.+.. .-+.+||+|
T Consensus 79 ~~vLDiG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i 155 (226)
T 1i1n_A 79 AKALDVGSGSGILTACFARMVGCTG---KVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAI 155 (226)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEE
T ss_pred CEEEEEcCCcCHHHHHHHHHhCCCc---EEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEE
Confidence 379999999999999998752 3 4555553 46665554431 1 011111111111 113789999
Q ss_pred hhhhhhhhhhhcCCCcccchhhccccccCcceEEEecCh
Q 007128 525 HAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 525 h~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
++...+. .++.++.|+|||||.+++....
T Consensus 156 ~~~~~~~----------~~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 156 HVGAAAP----------VVPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EECSBBS----------SCCHHHHHTEEEEEEEEEEESC
T ss_pred EECCchH----------HHHHHHHHhcCCCcEEEEEEec
Confidence 9865553 4667899999999999997654
No 460
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.82 E-value=5.8e-07 Score=91.74 Aligned_cols=102 Identities=12% Similarity=0.128 Sum_probs=65.1
Q ss_pred cchhhHHHhhhcc--hhhHhhhcC---CceEEEEeecCCC-CCceEEEeecc----------cccchhhhhhhc--ccCC
Q 007128 457 NSLRNLMDMKAHL--GSFAAALKE---KDVWVMSVVPEDG-PNTLKLIYDRG----------LIGSIHNWCEAY--STYP 518 (617)
Q Consensus 457 ~~~r~vLD~g~G~--G~fa~~L~~---~~~~v~~v~~~~~-~~~l~~~~~rg----------l~~~~~~~~e~~--~~~p 518 (617)
..++.|||+|||+ ++....++. .+. .|+.+|. +.||..+.++- +.+.+.++..-+ +...
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~~la~~~~P~a---rVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~ 153 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLHEIAQSVAPES---RVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELR 153 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHHHHHHHHCTTC---EEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHH
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHHCCCC---EEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccc
Confidence 4678999999998 334444332 244 5777775 68887776541 123333321100 1001
Q ss_pred cchh-----hhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecC
Q 007128 519 RTYD-----LLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDK 562 (617)
Q Consensus 519 ~tfD-----lvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~ 562 (617)
++|| .|.++.+|+|+..+ -++..+|.++.+.|+|||+|+|++.
T Consensus 154 ~~~D~~~p~av~~~avLH~l~d~-~~p~~~l~~l~~~L~PGG~Lvls~~ 201 (277)
T 3giw_A 154 DTLDLTRPVALTVIAIVHFVLDE-DDAVGIVRRLLEPLPSGSYLAMSIG 201 (277)
T ss_dssp TTCCTTSCCEEEEESCGGGSCGG-GCHHHHHHHHHTTSCTTCEEEEEEE
T ss_pred cccCcCCcchHHhhhhHhcCCch-hhHHHHHHHHHHhCCCCcEEEEEec
Confidence 5566 37789999998722 1245799999999999999999953
No 461
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=97.81 E-value=7.4e-07 Score=93.69 Aligned_cols=101 Identities=10% Similarity=0.082 Sum_probs=63.7
Q ss_pred chhhHHHhhhcchhhHhhhcCCc-eEEEEeecCCC-CCceEEEeec------cc----ccchh-hhhhhcccCC-cchhh
Q 007128 458 SLRNLMDMKAHLGSFAAALKEKD-VWVMSVVPEDG-PNTLKLIYDR------GL----IGSIH-NWCEAYSTYP-RTYDL 523 (617)
Q Consensus 458 ~~r~vLD~g~G~G~fa~~L~~~~-~~v~~v~~~~~-~~~l~~~~~r------gl----~~~~~-~~~e~~~~~p-~tfDl 523 (617)
.-++|||+|||+|.++..|++.. + ..|+.+|. +.++++|.++ |+ +-.++ |..+.+..++ ++||+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~--~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASI--EQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTC--CEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 34689999999999999999862 2 25666664 5676666543 22 11111 2222223343 79999
Q ss_pred hhhhhhhhhhhhcCCCcccchhhccccccCcceEEEe
Q 007128 524 LHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIR 560 (617)
Q Consensus 524 vh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~ 560 (617)
|.++...+......-....++.++.|+|||||.+++.
T Consensus 198 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 198 VIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 9985432211001001357899999999999999996
No 462
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.81 E-value=8.1e-06 Score=83.26 Aligned_cols=81 Identities=16% Similarity=0.152 Sum_probs=60.3
Q ss_pred hHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCccccccccc
Q 007128 193 KYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTK 270 (617)
Q Consensus 193 ~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~ 270 (617)
...+.+.+.+.. .. + +|||||||+|.++..|++. .|+++|+++.++..++.+.. ..++.+..+|+.
T Consensus 34 ~i~~~Iv~~~~~------~~--~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~---~~~v~vi~~D~l 101 (271)
T 3fut_A 34 AHLRRIVEAARP------FT--G-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLS---GLPVRLVFQDAL 101 (271)
T ss_dssp HHHHHHHHHHCC------CC--S-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTT---TSSEEEEESCGG
T ss_pred HHHHHHHHhcCC------CC--C-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC---CCCEEEEECChh
Confidence 455667777665 22 3 7999999999999999876 59999999988776654332 246788888998
Q ss_pred ccCCCCC-cccccccc
Q 007128 271 RLPYPSR-SFELAHCS 285 (617)
Q Consensus 271 ~lpf~~~-sFDlV~~s 285 (617)
.+++++. .||.|+++
T Consensus 102 ~~~~~~~~~~~~iv~N 117 (271)
T 3fut_A 102 LYPWEEVPQGSLLVAN 117 (271)
T ss_dssp GSCGGGSCTTEEEEEE
T ss_pred hCChhhccCccEEEec
Confidence 8887643 57887765
No 463
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.81 E-value=1.8e-06 Score=91.98 Aligned_cols=48 Identities=19% Similarity=0.354 Sum_probs=37.0
Q ss_pred ccCCCCCccccccccccccccccccce--------------------------------------EEEEecccccCCcee
Q 007128 271 RLPYPSRSFELAHCSRCRIDWLQRDGI--------------------------------------LLLELDRLLRPGGYF 312 (617)
Q Consensus 271 ~lpf~~~sFDlV~~s~~l~h~~~~~~~--------------------------------------~L~el~RvLrPGG~l 312 (617)
.-.||+++||+|+++.+ +||..+.+. +|+..++.|+|||.+
T Consensus 143 ~rlfP~~S~d~v~Ss~a-LHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~m 221 (374)
T 3b5i_A 143 RRLFPARTIDFFHSAFS-LHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAM 221 (374)
T ss_dssp SCCSCTTCEEEEEEESC-TTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred cccCCCcceEEEEecce-eeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEE
Confidence 34588999999999987 789775432 255669999999999
Q ss_pred eecChhh
Q 007128 313 AYSSPEA 319 (617)
Q Consensus 313 vis~p~~ 319 (617)
+++....
T Consensus 222 vl~~~gr 228 (374)
T 3b5i_A 222 FLVCLGR 228 (374)
T ss_dssp EEEEEEC
T ss_pred EEEEecC
Confidence 9985533
No 464
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=97.81 E-value=3.9e-06 Score=85.13 Aligned_cols=91 Identities=13% Similarity=0.080 Sum_probs=61.6
Q ss_pred hhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecc------c-ccchhhhhhhcccCCcchhhhhhhhhh
Q 007128 459 LRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRG------L-IGSIHNWCEAYSTYPRTYDLLHAWTVF 530 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rg------l-~~~~~~~~e~~~~~p~tfDlvh~~~~~ 530 (617)
-++|||+|||+|+++..+++.+ ..|+.+|. +.+++.|.++- + -..+.-...+...+.++||+|.++.
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~~---~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~Ii~d~-- 147 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKYD---THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFCLQ-- 147 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTSS---CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEESS--
T ss_pred CCEEEEEeCCcCHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEEEECC--
Confidence 3689999999999999998874 36777774 67777665541 1 0001111122222337899998752
Q ss_pred hhhhhcCCCcccchhhccccccCcceEEEec
Q 007128 531 SDIEKRGCSGEDLLLEMDRILRPTGFVIIRD 561 (617)
Q Consensus 531 ~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~ 561 (617)
.+....+.++.|+|||||.+++..
T Consensus 148 -------~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 148 -------EPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp -------CCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred -------CChHHHHHHHHHhcCCCcEEEEEc
Confidence 134458999999999999999963
No 465
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=97.81 E-value=8.4e-07 Score=92.71 Aligned_cols=98 Identities=11% Similarity=0.110 Sum_probs=61.5
Q ss_pred hhHHHhhhcchhhHhhhcCC-ceEEEEeecCCC-CCceEEEeecc------c----ccchh-hhhhhcccCCcchhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK-DVWVMSVVPEDG-PNTLKLIYDRG------L----IGSIH-NWCEAYSTYPRTYDLLHA 526 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~-~~~v~~v~~~~~-~~~l~~~~~rg------l----~~~~~-~~~e~~~~~p~tfDlvh~ 526 (617)
++|||+|||+|+++..+++. +. ..|+.+|. +.+++.|.++- + +-.++ |..+.+...+++||+|.+
T Consensus 118 ~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 118 KNVLVVGGGDGGIIRELCKYKSV--ENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp CEEEEEECTTCHHHHHHTTCTTC--CEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CEEEEEcCCccHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 57999999999999999986 33 25666664 56666655431 1 11111 222222223588999997
Q ss_pred hhhhhhhhhcCCCc--ccchhhccccccCcceEEEec
Q 007128 527 WTVFSDIEKRGCSG--EDLLLEMDRILRPTGFVIIRD 561 (617)
Q Consensus 527 ~~~~~~~~~~~c~~--~~~l~Em~RiLrPgG~~ii~~ 561 (617)
+...+ .... -.+ ..++.++.|+|||||.+++..
T Consensus 196 d~~~p-~~~~-~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 196 DSSDP-IGPA-ETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp ECCCS-SSGG-GGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcCC-CCcc-hhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 54211 1100 011 578999999999999999964
No 466
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.80 E-value=3.5e-06 Score=89.55 Aligned_cols=93 Identities=16% Similarity=0.174 Sum_probs=67.9
Q ss_pred eEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCC-CcccccccccccC--CCC--------------
Q 007128 216 RTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRLP--YPS-------------- 276 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~lp--f~~-------------- 276 (617)
.+|||+|||+|.++..|+.. .|+++|+++.++..++ +.+...++ ++.+..+|+..+. +..
T Consensus 215 ~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~-~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~ 293 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQ-YNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKS 293 (369)
T ss_dssp SEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHH-HHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGG
T ss_pred CEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHH-HHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccccc
Confidence 57999999999999998875 5999999999988887 44555555 5778887876542 121
Q ss_pred CccccccccccccccccccceEEEEecccccCCceeeecC
Q 007128 277 RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSS 316 (617)
Q Consensus 277 ~sFDlV~~s~~l~h~~~~~~~~L~el~RvLrPGG~lvis~ 316 (617)
.+||+|++.- +...+..++.++|+++|.+++.+
T Consensus 294 ~~fD~Vv~dP-------Pr~g~~~~~~~~l~~~g~ivyvs 326 (369)
T 3bt7_A 294 YQCETIFVDP-------PRSGLDSETEKMVQAYPRILYIS 326 (369)
T ss_dssp CCEEEEEECC-------CTTCCCHHHHHHHTTSSEEEEEE
T ss_pred CCCCEEEECc-------CccccHHHHHHHHhCCCEEEEEE
Confidence 3799997431 11235667888899999888764
No 467
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.79 E-value=6.8e-06 Score=83.08 Aligned_cols=78 Identities=13% Similarity=0.220 Sum_probs=57.2
Q ss_pred hHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc--hhhhhccCCCccchhhhHHHHHhCCCccccccccc
Q 007128 193 KYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS--DVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTK 270 (617)
Q Consensus 193 ~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~--~V~gvDis~~dl~~a~~~~a~~rg~~~~~~~~d~~ 270 (617)
...+.+.+.+.. ..+ .+|||||||+|.++..|+++ .|+++|+++.++..++.+... ..++.+..+|+.
T Consensus 16 ~i~~~iv~~~~~------~~~--~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~ 85 (255)
T 3tqs_A 16 FVLQKIVSAIHP------QKT--DTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDAL 85 (255)
T ss_dssp HHHHHHHHHHCC------CTT--CEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTT
T ss_pred HHHHHHHHhcCC------CCc--CEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchH
Confidence 455667777765 333 68999999999999999876 599999999887766643322 346778888888
Q ss_pred ccCCCC----Cccc
Q 007128 271 RLPYPS----RSFE 280 (617)
Q Consensus 271 ~lpf~~----~sFD 280 (617)
.+++++ +.||
T Consensus 86 ~~~~~~~~~~~~~~ 99 (255)
T 3tqs_A 86 QFDFSSVKTDKPLR 99 (255)
T ss_dssp TCCGGGSCCSSCEE
T ss_pred hCCHHHhccCCCeE
Confidence 887653 4577
No 468
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.79 E-value=1.5e-05 Score=84.43 Aligned_cols=105 Identities=15% Similarity=0.202 Sum_probs=64.9
Q ss_pred CceeEEEeecccccccccccccc--------------------hhhhhccCCCccchhhhHHHHH-hCCCcccccc---c
Q 007128 213 GRLRTVLDVGCGVASFGAYLLSS--------------------DVITMSLAPNDVHQNQIQFALE-RGIPAYLGVL---G 268 (617)
Q Consensus 213 ~~~~~VLDVGCG~G~~~~~L~~~--------------------~V~gvDis~~dl~~a~~~~a~~-rg~~~~~~~~---d 268 (617)
...-+|+|+||++|..+..+... .|..-|+..+|........... ...+..|..+ +
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGS 129 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESC
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchh
Confidence 34578999999999877766543 1333455555544333211110 0001123222 3
Q ss_pred ccccCCCCCccccccccccccccccccceEE---------------------------------EEecccccCCceeeec
Q 007128 269 TKRLPYPSRSFELAHCSRCRIDWLQRDGILL---------------------------------LELDRLLRPGGYFAYS 315 (617)
Q Consensus 269 ~~~lpf~~~sFDlV~~s~~l~h~~~~~~~~L---------------------------------~el~RvLrPGG~lvis 315 (617)
.....||+++||+|+++.+ +||..+....+ +...+.|+|||.++++
T Consensus 130 Fy~rlfp~~S~d~v~Ss~a-LHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~ 208 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYS-LMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLT 208 (359)
T ss_dssp SSSCCSCTTCBSCEEEESC-TTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEE
T ss_pred hhhccCCCCceEEEEehhh-hhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 4456789999999999887 78987654333 2338999999999997
Q ss_pred Chh
Q 007128 316 SPE 318 (617)
Q Consensus 316 ~p~ 318 (617)
...
T Consensus 209 ~~g 211 (359)
T 1m6e_X 209 ILG 211 (359)
T ss_dssp EEE
T ss_pred Eec
Confidence 543
No 469
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.79 E-value=7.7e-07 Score=93.08 Aligned_cols=92 Identities=13% Similarity=0.082 Sum_probs=56.4
Q ss_pred hhHHHhhhcchhhHhhhcCC-c--eEEEEeecCCC-CCceEEEeeccc-----------------ccchh-hhhhhcccC
Q 007128 460 RNLMDMKAHLGSFAAALKEK-D--VWVMSVVPEDG-PNTLKLIYDRGL-----------------IGSIH-NWCEAYSTY 517 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~-~--~~v~~v~~~~~-~~~l~~~~~rgl-----------------~~~~~-~~~e~~~~~ 517 (617)
.+|||+|||+|.++..|++. + . .|+.+|. +.+++.|.++.- +-.++ |..+....+
T Consensus 107 ~~VLDiG~G~G~~~~~la~~~g~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 107 DTVLEAGSGSGGMSLFLSKAVGSQG---RVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTC---EEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CEEEEeCCCcCHHHHHHHHHhCCCc---eEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 37999999999999999875 2 4 3455553 455555544311 11111 222211123
Q ss_pred C-cchhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecCh
Q 007128 518 P-RTYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 518 p-~tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
+ ++||+|.++.. +...++.++.|+|||||.+++..+.
T Consensus 184 ~~~~fD~V~~~~~---------~~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 184 KSLTFDAVALDML---------NPHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp ----EEEEEECSS---------STTTTHHHHGGGEEEEEEEEEEESS
T ss_pred CCCCeeEEEECCC---------CHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 3 68999987321 3445899999999999999987764
No 470
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.78 E-value=4e-07 Score=98.86 Aligned_cols=99 Identities=9% Similarity=0.072 Sum_probs=61.8
Q ss_pred hhhHHHhhhcchhhHhhhcCC-ceEEEEeecCCC-CCceEEE-------eec----cc-ccchh-----hhhh--hcccC
Q 007128 459 LRNLMDMKAHLGSFAAALKEK-DVWVMSVVPEDG-PNTLKLI-------YDR----GL-IGSIH-----NWCE--AYSTY 517 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~-~~~v~~v~~~~~-~~~l~~~-------~~r----gl-~~~~~-----~~~e--~~~~~ 517 (617)
-.+|||+|||+|.++..|+.. +.. .|+.+|. +.+++.| .++ |+ ++.+. ++.. +|...
T Consensus 243 g~~VLDLGCGsG~la~~LA~~~g~~--~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~ 320 (433)
T 1u2z_A 243 GDTFMDLGSGVGNCVVQAALECGCA--LSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAEL 320 (433)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCS--EEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHH
T ss_pred CCEEEEeCCCcCHHHHHHHHHCCCC--EEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccccc
Confidence 346999999999999999985 321 3455553 3444444 332 32 12211 1111 12111
Q ss_pred CcchhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecChh
Q 007128 518 PRTYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS 564 (617)
Q Consensus 518 p~tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~ 564 (617)
+.+||+|.++.++. .. ++..+|.||.|+|||||.+++.++..
T Consensus 321 ~~~FDvIvvn~~l~-~~----d~~~~L~el~r~LKpGG~lVi~d~f~ 362 (433)
T 1u2z_A 321 IPQCDVILVNNFLF-DE----DLNKKVEKILQTAKVGCKIISLKSLR 362 (433)
T ss_dssp GGGCSEEEECCTTC-CH----HHHHHHHHHHTTCCTTCEEEESSCSS
T ss_pred cCCCCEEEEeCccc-cc----cHHHHHHHHHHhCCCCeEEEEeeccC
Confidence 37899999864441 22 56678999999999999999997543
No 471
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=97.77 E-value=1e-06 Score=91.38 Aligned_cols=102 Identities=13% Similarity=0.069 Sum_probs=61.0
Q ss_pred hhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec------cc----ccchh-hhhhhcccCCcchhhhhh
Q 007128 459 LRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR------GL----IGSIH-NWCEAYSTYPRTYDLLHA 526 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r------gl----~~~~~-~~~e~~~~~p~tfDlvh~ 526 (617)
-++|||+|||+|.++..|+++.- +..|+.+|. +.+++.|.++ |+ +-.++ |-.+-++..+++||+|.+
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~ 174 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHPS-VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEE
Confidence 36899999999999999998731 125666664 5666655543 11 11111 111112223489999998
Q ss_pred hhhhhhhhhcCCCcccchhhccccccCcceEEEec
Q 007128 527 WTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRD 561 (617)
Q Consensus 527 ~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~ 561 (617)
+...+......-....++.++.|+|||||.+++..
T Consensus 175 d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 175 DSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp ECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 54432111000112568999999999999999875
No 472
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=97.77 E-value=1.9e-07 Score=93.41 Aligned_cols=99 Identities=12% Similarity=0.051 Sum_probs=54.8
Q ss_pred hhHHHhhhcchhhHhhhcCC--ceEEEEeecCCC-CCceEEEeec----cc---ccchh-h----hhhhcccC-Ccchhh
Q 007128 460 RNLMDMKAHLGSFAAALKEK--DVWVMSVVPEDG-PNTLKLIYDR----GL---IGSIH-N----WCEAYSTY-PRTYDL 523 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~--~~~v~~v~~~~~-~~~l~~~~~r----gl---~~~~~-~----~~e~~~~~-p~tfDl 523 (617)
.+|||+|||+|.++..|+.+ +. .|+.+|. +.|++.|.++ |+ +-.++ + +.+.++.. +.+||+
T Consensus 67 ~~vLDlG~G~G~~~~~la~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 67 RRGIDIGTGASCIYPLLGATLNGW---YFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CEEEEESCTTTTHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CEEEEeCCChhHHHHHHHHhCCCC---eEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 46999999999999998875 34 5666664 5777666554 32 11222 1 11122211 158999
Q ss_pred hhhhhhhhhhhh-----------cCCCcccchhhccccccCcceEEEec
Q 007128 524 LHAWTVFSDIEK-----------RGCSGEDLLLEMDRILRPTGFVIIRD 561 (617)
Q Consensus 524 vh~~~~~~~~~~-----------~~c~~~~~l~Em~RiLrPgG~~ii~~ 561 (617)
|.++-.|.+... .......++.++.|+|||||.+.+.+
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~ 192 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVK 192 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHHHH
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEH
Confidence 998744432110 00112356778999999988776554
No 473
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=97.74 E-value=5e-07 Score=101.64 Aligned_cols=96 Identities=19% Similarity=0.183 Sum_probs=64.7
Q ss_pred hHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEee----ccc--ccchhhhhhhcc-cC-Ccchhhhhhhhhhh
Q 007128 461 NLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYD----RGL--IGSIHNWCEAYS-TY-PRTYDLLHAWTVFS 531 (617)
Q Consensus 461 ~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~----rgl--~~~~~~~~e~~~-~~-p~tfDlvh~~~~~~ 531 (617)
+|||||||.|.++..|++.|. +|+.+|. +.++++|.. +|. +-..+.-.|++. .+ ++.||+|.|..+|.
T Consensus 69 ~vLDvGCG~G~~~~~la~~ga---~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~e 145 (569)
T 4azs_A 69 NVLDLGCAQGFFSLSLASKGA---TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVFH 145 (569)
T ss_dssp EEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCHH
T ss_pred eEEEECCCCcHHHHHHHhCCC---EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcchh
Confidence 699999999999999999999 5666664 577776654 443 222222234431 23 38999999999999
Q ss_pred hhhhcCCCcccchhhccccccCcceEEEec
Q 007128 532 DIEKRGCSGEDLLLEMDRILRPTGFVIIRD 561 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~ 561 (617)
|+.... ....+..+-+.|+++|..++-.
T Consensus 146 hv~~~~--~~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 146 HIVHLH--GIDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp HHHHHH--CHHHHHHHHHHHHHHSSEEEEE
T ss_pred cCCCHH--HHHHHHHHHHHhccccceeeEE
Confidence 997321 1123445666688888766543
No 474
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=97.74 E-value=1.3e-06 Score=91.01 Aligned_cols=100 Identities=8% Similarity=0.065 Sum_probs=59.6
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec------cc----ccchh-hhhhhcccCCcchhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR------GL----IGSIH-NWCEAYSTYPRTYDLLHAW 527 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r------gl----~~~~~-~~~e~~~~~p~tfDlvh~~ 527 (617)
++|||+|||+|+++..|++..- +..|+.+|. +.+++.|.++ |+ +-.++ |..+.+..-+++||+|.++
T Consensus 110 ~~VLdIG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d 188 (314)
T 2b2c_A 110 KRVLIIGGGDGGILREVLKHES-VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITD 188 (314)
T ss_dssp CEEEEESCTTSHHHHHHTTCTT-CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEEC
T ss_pred CEEEEEcCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEc
Confidence 5799999999999999998621 125666674 5666665543 21 11111 2111122224889999975
Q ss_pred hhhhhhhhcCCCc-ccchhhccccccCcceEEEec
Q 007128 528 TVFSDIEKRGCSG-EDLLLEMDRILRPTGFVIIRD 561 (617)
Q Consensus 528 ~~~~~~~~~~c~~-~~~l~Em~RiLrPgG~~ii~~ 561 (617)
...+ .....-.. ..++.++.|+|||||.+++..
T Consensus 189 ~~~~-~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 189 SSDP-VGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred CCCC-CCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 4322 21111011 678999999999999999975
No 475
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=97.71 E-value=1.2e-06 Score=84.53 Aligned_cols=115 Identities=13% Similarity=0.138 Sum_probs=75.5
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc-cc-chhhhhhhcccCCcchhhhhhhhhhhhhhhc
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL-IG-SIHNWCEAYSTYPRTYDLLHAWTVFSDIEKR 536 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl-~~-~~~~~~e~~~~~p~tfDlvh~~~~~~~~~~~ 536 (617)
.+|||+|||+|.++..|++.+.. +|+.+|. +.+++.+.++-- .+ .+.-.+.++..+|.+||+|.++-.|.... .
T Consensus 51 ~~vlD~g~G~G~~~~~l~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~D~v~~~~p~~~~~-~ 127 (207)
T 1wy7_A 51 KVVADLGAGTGVLSYGALLLGAK--EVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFNSRVDIVIMNPPFGSQR-K 127 (207)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCCCCCSEEEECCCCSSSS-T
T ss_pred CEEEEeeCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcCCCCCEEEEcCCCcccc-C
Confidence 46999999999999999987542 4666664 566665554421 01 22222334444568999999977766332 1
Q ss_pred CCCcccchhhccccccCcceEEEe-cChhHHHHHHHhhhhccccc
Q 007128 537 GCSGEDLLLEMDRILRPTGFVIIR-DKQSVVDFVKKYLRALNWEA 580 (617)
Q Consensus 537 ~c~~~~~l~Em~RiLrPgG~~ii~-~~~~~~~~~~~~~~~~~w~~ 580 (617)
-....++.++.|+| ||.+++. .+....+.+.+++...+|+.
T Consensus 128 -~~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 169 (207)
T 1wy7_A 128 -HADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGFVV 169 (207)
T ss_dssp -TTTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTEEE
T ss_pred -CchHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCCeE
Confidence 13346788888888 6655554 25567777888888888765
No 476
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=97.70 E-value=1.8e-06 Score=88.50 Aligned_cols=101 Identities=10% Similarity=0.074 Sum_probs=61.9
Q ss_pred hhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeecc------c----ccchh-hhhhhcccCCcchhhhhh
Q 007128 459 LRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRG------L----IGSIH-NWCEAYSTYPRTYDLLHA 526 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rg------l----~~~~~-~~~e~~~~~p~tfDlvh~ 526 (617)
-++|||+|||.|+++..+++..- +.+|+.+|. +.+++.+.++- + +-.++ |..+.+...+++||+|.+
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCeEEEEeCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 36899999999999999997631 125566663 45555554431 1 01111 111112222589999998
Q ss_pred hhhhhhhhhcCCCc--ccchhhccccccCcceEEEecC
Q 007128 527 WTVFSDIEKRGCSG--EDLLLEMDRILRPTGFVIIRDK 562 (617)
Q Consensus 527 ~~~~~~~~~~~c~~--~~~l~Em~RiLrPgG~~ii~~~ 562 (617)
+...+..... .+ ..++.++.|+|||||.+++...
T Consensus 158 d~~~~~~~~~--~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 158 DSSDPIGPAE--TLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp ECCCTTTGGG--GGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred cCCCCCCcch--hhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 5433211111 12 5789999999999999998843
No 477
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=97.69 E-value=4.9e-07 Score=89.42 Aligned_cols=92 Identities=18% Similarity=0.213 Sum_probs=59.6
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----ccccchhhhhhh-cccCC-c-chhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWCEA-YSTYP-R-TYDLLHAWTVFS 531 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~e~-~~~~p-~-tfDlvh~~~~~~ 531 (617)
.+|||+|||+|.++..|++... .+|+.+|. +.+++.+.++ |+ ..+...+.+ ...++ . .||+|.+..++.
T Consensus 93 ~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~fD~Ii~~~~~~ 169 (235)
T 1jg1_A 93 MNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGV-KNVHVILGDGSKGFPPKAPYDVIIVTAGAP 169 (235)
T ss_dssp CCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTC-CSEEEEESCGGGCCGGGCCEEEEEECSBBS
T ss_pred CEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCC-CCcEEEECCcccCCCCCCCccEEEECCcHH
Confidence 4799999999999999998641 24555563 4666655554 22 111111111 12233 3 499999876665
Q ss_pred hhhhcCCCcccchhhccccccCcceEEEecChh
Q 007128 532 DIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS 564 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~ 564 (617)
++ ..++.|+|||||.+++.-...
T Consensus 170 ~~----------~~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 170 KI----------PEPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp SC----------CHHHHHTEEEEEEEEEEECSS
T ss_pred HH----------HHHHHHhcCCCcEEEEEEecC
Confidence 33 348889999999999987643
No 478
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=97.69 E-value=1.3e-06 Score=88.85 Aligned_cols=95 Identities=16% Similarity=0.149 Sum_probs=61.2
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc--ccchhhhhhhcccCCcchhhhhhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL--IGSIHNWCEAYSTYPRTYDLLHAWTVFSD 532 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl--~~~~~~~~e~~~~~p~tfDlvh~~~~~~~ 532 (617)
.+|||+|||+|+|+..|++... ...|+.+|. +.+++.|.++ |+ +-.+..-.+.++ .+.+||+|.++...
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~-~~~~~D~Vi~d~p~-- 196 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVE-LKDVADRVIMGYVH-- 196 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCC-CTTCEEEEEECCCS--
T ss_pred CEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcC-ccCCceEEEECCcc--
Confidence 4699999999999999987621 113555553 4555554432 22 111111112221 24789999874322
Q ss_pred hhhcCCCcccchhhccccccCcceEEEecChh
Q 007128 533 IEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS 564 (617)
Q Consensus 533 ~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~ 564 (617)
+...++.++.|+|||||.+++.....
T Consensus 197 ------~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 197 ------KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp ------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ------cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 56789999999999999999987754
No 479
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=97.68 E-value=1.3e-06 Score=85.88 Aligned_cols=94 Identities=15% Similarity=0.121 Sum_probs=58.3
Q ss_pred hhHHHhhhcchhhHhhhcCC-ce----EEEEeecCCC-CCceEEEeeccc--------ccchhhhhhhcc-cCC--cchh
Q 007128 460 RNLMDMKAHLGSFAAALKEK-DV----WVMSVVPEDG-PNTLKLIYDRGL--------IGSIHNWCEAYS-TYP--RTYD 522 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~-~~----~v~~v~~~~~-~~~l~~~~~rgl--------~~~~~~~~e~~~-~~p--~tfD 522 (617)
.+|||+|||+|.+++.|++. +. .-..|+.+|. +.+++.+.++.- ...++..+.+.. .++ ++||
T Consensus 86 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 165 (227)
T 1r18_A 86 ARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPYN 165 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGGCSEE
T ss_pred CEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcCCCcc
Confidence 36999999999999999874 21 0003455553 466665554421 111111111111 233 6899
Q ss_pred hhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecCh
Q 007128 523 LLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 523 lvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
+|++...+. .++.++.++|||||.+++.-..
T Consensus 166 ~I~~~~~~~----------~~~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 166 AIHVGAAAP----------DTPTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EEEECSCBS----------SCCHHHHHTEEEEEEEEEEESC
T ss_pred EEEECCchH----------HHHHHHHHHhcCCCEEEEEEec
Confidence 999866655 3558899999999999997654
No 480
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=97.68 E-value=1.3e-06 Score=90.84 Aligned_cols=101 Identities=11% Similarity=0.027 Sum_probs=61.9
Q ss_pred hhhHHHhhhcchhhHhhhcCC-ceEEEEeecCCC-CCceEEEeec------c-c----ccchh-hhhhhcccCCcchhhh
Q 007128 459 LRNLMDMKAHLGSFAAALKEK-DVWVMSVVPEDG-PNTLKLIYDR------G-L----IGSIH-NWCEAYSTYPRTYDLL 524 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~-~~~v~~v~~~~~-~~~l~~~~~r------g-l----~~~~~-~~~e~~~~~p~tfDlv 524 (617)
-++|||+|||+|+++..|++. ++ ..|+.+|. +.+++.+.++ | + +-.++ |..+-+...+++||+|
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTV--EKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTC--CEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCC--CEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 367999999999999999987 23 25666664 4666655443 1 1 11111 1111122224899999
Q ss_pred hhhhhhhh---hhhcCCCcccchhhccccccCcceEEEec
Q 007128 525 HAWTVFSD---IEKRGCSGEDLLLEMDRILRPTGFVIIRD 561 (617)
Q Consensus 525 h~~~~~~~---~~~~~c~~~~~l~Em~RiLrPgG~~ii~~ 561 (617)
.++...+. .....-....++.++.|+|||||.+++..
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 98654431 00000013578999999999999999873
No 481
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=97.67 E-value=1.9e-06 Score=92.53 Aligned_cols=117 Identities=15% Similarity=0.173 Sum_probs=69.4
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----ccccc--hhhhhhhcccCCcchhhhhhhhhh-h
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GLIGS--IHNWCEAYSTYPRTYDLLHAWTVF-S 531 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl~~~--~~~~~e~~~~~p~tfDlvh~~~~~-~ 531 (617)
.+|||+|||+|+|+..++..+.. |+.+|. +.+++.+.++ |+-.. ..|..+.+..++..||+|.++--. .
T Consensus 216 ~~VLDlg~GtG~~sl~~a~~ga~---V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~ 292 (393)
T 4dmg_A 216 ERVLDVYSYVGGFALRAARKGAY---ALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLV 292 (393)
T ss_dssp CEEEEESCTTTHHHHHHHHTTCE---EEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCC
T ss_pred CeEEEcccchhHHHHHHHHcCCe---EEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCC
Confidence 36999999999999999998773 666674 5666665544 33111 112222223335459999864211 0
Q ss_pred ----hhhhcCCCcccchhhccccccCcceEEEecChh------HHHHHHHhhhhcccc
Q 007128 532 ----DIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS------VVDFVKKYLRALNWE 579 (617)
Q Consensus 532 ----~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~------~~~~~~~~~~~~~w~ 579 (617)
.+.....+...++.++.|+|||||++++..... ..+.++..+...+.+
T Consensus 293 ~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~ 350 (393)
T 4dmg_A 293 KRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRR 350 (393)
T ss_dssp SSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCe
Confidence 000000134578889999999999998554432 334455555544433
No 482
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.66 E-value=1.3e-06 Score=88.91 Aligned_cols=113 Identities=17% Similarity=0.152 Sum_probs=65.0
Q ss_pred hhHHHhhhcchhhHhhhcC--Cc-eEEEEeecCCC-CCceEEEeec----cc--ccchhhhhhhccc----CCcchhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKE--KD-VWVMSVVPEDG-PNTLKLIYDR----GL--IGSIHNWCEAYST----YPRTYDLLH 525 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~--~~-~~v~~v~~~~~-~~~l~~~~~r----gl--~~~~~~~~e~~~~----~p~tfDlvh 525 (617)
..|||+|||+|+++..|++ .+ . .|+.+|. +.+++.+.++ |+ +-.++.-...++. -+.+||+|.
T Consensus 85 ~~VLDlgaG~G~~t~~la~~~~~~~---~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl 161 (274)
T 3ajd_A 85 DFILDMCAAPGGKTTHLAQLMKNKG---TIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKIL 161 (274)
T ss_dssp CEEEETTCTTCHHHHHHHHHTTTCS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEeCCCccHHHHHHHHHcCCCC---EEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEE
Confidence 3699999999999999986 33 3 4556663 4566555444 33 1111111112221 147899998
Q ss_pred hh------hhhh--------hhhhcCCCcccchhhccccccCcceEEEecC----hhHHHHHHHhhhh
Q 007128 526 AW------TVFS--------DIEKRGCSGEDLLLEMDRILRPTGFVIIRDK----QSVVDFVKKYLRA 575 (617)
Q Consensus 526 ~~------~~~~--------~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~----~~~~~~~~~~~~~ 575 (617)
++ +++. ++....-....+|.++.|+|||||.+++..- .+..+.++.+++.
T Consensus 162 ~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~ 229 (274)
T 3ajd_A 162 LDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQK 229 (274)
T ss_dssp EEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHH
T ss_pred EcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHh
Confidence 75 2221 1111112346789999999999999999642 2233445665543
No 483
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.66 E-value=7.5e-06 Score=82.64 Aligned_cols=134 Identities=14% Similarity=0.135 Sum_probs=86.3
Q ss_pred cchhhHHHhhhcchhhHhhhcCC-ceEEEEeecCCC-CCceEEEeeccc-ccchh--hhh-hhcccCCcchhhhhhhhhh
Q 007128 457 NSLRNLMDMKAHLGSFAAALKEK-DVWVMSVVPEDG-PNTLKLIYDRGL-IGSIH--NWC-EAYSTYPRTYDLLHAWTVF 530 (617)
Q Consensus 457 ~~~r~vLD~g~G~G~fa~~L~~~-~~~v~~v~~~~~-~~~l~~~~~rgl-~~~~~--~~~-e~~~~~p~tfDlvh~~~~~ 530 (617)
....+|||+|||+|-|+..+... +. -.+..+|. +.+++++.++.- .|.-+ .+. ......+..||++.+..+.
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~--a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~lkti 208 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAE--TVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTL 208 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTT--CEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEETTCH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCC--CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHHHHH
Confidence 34678999999999999999765 11 13555553 577777766621 11111 111 1112234999999999999
Q ss_pred hhhhhcCCCcccchhhccccccCcceEEEecChh-----------HHHHHHHhhhhcccccccccccCCCCCCCCCCeEE
Q 007128 531 SDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS-----------VVDFVKKYLRALNWEAVATTADASSDSDKDGDEVV 599 (617)
Q Consensus 531 ~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~-----------~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 599 (617)
+++++.+ ...+.++-..|+|+|.||-.++.+ ..+..+..+..-+|.. .... .+.|-+
T Consensus 209 ~~Le~q~---kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~--~~~~-------~~nEl~ 276 (281)
T 3lcv_B 209 PCLETQQ---RGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRI--QRLE-------IGNELI 276 (281)
T ss_dssp HHHHHHS---TTHHHHHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCE--EEEE-------ETTEEE
T ss_pred HHhhhhh---hHHHHHHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCce--eeee-------ecCeeE
Confidence 9997442 234558999999999999999933 3445677777778865 3322 345666
Q ss_pred EEEEe
Q 007128 600 FIVQK 604 (617)
Q Consensus 600 l~~~K 604 (617)
.+.+|
T Consensus 277 y~i~k 281 (281)
T 3lcv_B 277 YVIQK 281 (281)
T ss_dssp EEEC-
T ss_pred EEecC
Confidence 66654
No 484
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=97.64 E-value=4.4e-07 Score=88.93 Aligned_cols=94 Identities=14% Similarity=0.106 Sum_probs=58.8
Q ss_pred hhHHHhhhcchhhHhhhcCCce----EEEEeecCCC-CCceEEEeec----cc----ccchhhhhhhcc-cC------Cc
Q 007128 460 RNLMDMKAHLGSFAAALKEKDV----WVMSVVPEDG-PNTLKLIYDR----GL----IGSIHNWCEAYS-TY------PR 519 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~----~v~~v~~~~~-~~~l~~~~~r----gl----~~~~~~~~e~~~-~~------p~ 519 (617)
.+|||+|||+|.++..|++... -...|+.+|. +.+++.|.++ |+ ...+...+.+.. .+ +.
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 161 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELG 161 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHC
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCC
Confidence 4799999999999999987531 0013455553 4565555544 21 111111111111 11 27
Q ss_pred chhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEecCh
Q 007128 520 TYDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQ 563 (617)
Q Consensus 520 tfDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~ 563 (617)
+||+|++...++ .++.++.++|||||.+++.-..
T Consensus 162 ~fD~I~~~~~~~----------~~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 162 LFDAIHVGASAS----------ELPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CEEEEEECSBBS----------SCCHHHHHHEEEEEEEEEEEEE
T ss_pred CcCEEEECCchH----------HHHHHHHHhcCCCcEEEEEEcc
Confidence 899999866554 3568899999999999998765
No 485
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=97.64 E-value=6.3e-07 Score=92.01 Aligned_cols=93 Identities=13% Similarity=0.086 Sum_probs=58.5
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----ccccchhhhhhhcccCC-cchhhhhhh------
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GLIGSIHNWCEAYSTYP-RTYDLLHAW------ 527 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl~~~~~~~~e~~~~~p-~tfDlvh~~------ 527 (617)
.+|||+|||+|.++..|++.+. .|+.+|. +.+++.+.++ |+...++-.+.++..++ .+||+|.++
T Consensus 30 ~~VLDiG~G~G~lt~~L~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~~fD~vv~nlpy~~~ 106 (285)
T 1zq9_A 30 DVVLEVGPGTGNMTVKLLEKAK---KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQIS 106 (285)
T ss_dssp CEEEEECCTTSTTHHHHHHHSS---EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCCCCSEEEEECCGGGH
T ss_pred CEEEEEcCcccHHHHHHHhhCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccchhhcEEEEecCcccc
Confidence 4699999999999999998766 5666664 5777666554 22122222223333333 489999875
Q ss_pred -----hhhhhhhhcCCCcccch----hhc--cccccCcceEEE
Q 007128 528 -----TVFSDIEKRGCSGEDLL----LEM--DRILRPTGFVII 559 (617)
Q Consensus 528 -----~~~~~~~~~~c~~~~~l----~Em--~RiLrPgG~~ii 559 (617)
.++.|. .++..++ .|+ +|+|||||.++.
T Consensus 107 ~~~~~~~l~~~----~~~~~~~~m~qkEva~r~vlkPGg~~y~ 145 (285)
T 1zq9_A 107 SPFVFKLLLHR----PFFRCAILMFQREFALRLVAKPGDKLYC 145 (285)
T ss_dssp HHHHHHHHHCS----SCCSEEEEEEEHHHHHHHHCCTTCTTCS
T ss_pred hHHHHHHHhcC----cchhhhhhhhhHHHHHHHhcCCCCcccc
Confidence 333322 2444444 455 479999999853
No 486
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=97.64 E-value=1.2e-06 Score=91.40 Aligned_cols=100 Identities=8% Similarity=0.041 Sum_probs=61.0
Q ss_pred hhHHHhhhcchhhHhhhcC-C-ceEEEEeecCCC-CCceEEEeecc-c-----ccchh-hhhhhcccCC-cchhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKE-K-DVWVMSVVPEDG-PNTLKLIYDRG-L-----IGSIH-NWCEAYSTYP-RTYDLLHAWT 528 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~-~-~~~v~~v~~~~~-~~~l~~~~~rg-l-----~~~~~-~~~e~~~~~p-~tfDlvh~~~ 528 (617)
.+|||+|||.|+++..|++ . ++ .|+.+|. +.+++.+.++- + +-.++ |-.+-+..++ ++||+|.++.
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~---~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~ 167 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQS---RNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDV 167 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTC---EEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECC
T ss_pred CEEEEEECCcCHHHHHHHHHCCCc---EEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECC
Confidence 3799999999999999997 3 44 4555553 56666655431 1 11111 1111122343 8999998754
Q ss_pred hhhhhhhcCCCcccchhhccccccCcceEEEecC
Q 007128 529 VFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDK 562 (617)
Q Consensus 529 ~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~ 562 (617)
.........-.-..++.++.|+|||||.+++...
T Consensus 168 ~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 168 FAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp STTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 3221000000125789999999999999987654
No 487
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=97.63 E-value=1.2e-06 Score=87.61 Aligned_cols=99 Identities=9% Similarity=0.063 Sum_probs=61.1
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc-ccchhhhhhhccc--CC--cchhhhhhh------
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL-IGSIHNWCEAYST--YP--RTYDLLHAW------ 527 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl-~~~~~~~~e~~~~--~p--~tfDlvh~~------ 527 (617)
.+|||+|||+|.++..|++++. .|+.+|. +.+++.+.++-- ...++-.+.++.. ++ .+| .|.++
T Consensus 31 ~~VLDiG~G~G~~~~~l~~~~~---~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py~~~ 106 (245)
T 1yub_A 31 DTVYEIGTGKGHLTTKLAKISK---QVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRY-KIVGNIPYHLS 106 (245)
T ss_dssp EEEEECSCCCSSCSHHHHHHSS---EEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEE-EEEEECCSSSC
T ss_pred CEEEEEeCCCCHHHHHHHHhCC---eEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCCc-EEEEeCCcccc
Confidence 4699999999999999998875 6777884 678777766521 1111111222222 22 577 44432
Q ss_pred -hhhhhhhhcCCCcccch----hhccccccCcceEEEecC
Q 007128 528 -TVFSDIEKRGCSGEDLL----LEMDRILRPTGFVIIRDK 562 (617)
Q Consensus 528 -~~~~~~~~~~c~~~~~l----~Em~RiLrPgG~~ii~~~ 562 (617)
.++.++-.+......++ .++.|+|+|||.+.+...
T Consensus 107 ~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 107 TQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLH 146 (245)
T ss_dssp HHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTT
T ss_pred HHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhe
Confidence 22222222233555666 669999999998877553
No 488
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.63 E-value=3.8e-07 Score=90.87 Aligned_cols=93 Identities=12% Similarity=0.068 Sum_probs=60.4
Q ss_pred hhhHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CCceEEEeec----cc---ccchh-hhhhhcccC------Ccc
Q 007128 459 LRNLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PNTLKLIYDR----GL---IGSIH-NWCEAYSTY------PRT 520 (617)
Q Consensus 459 ~r~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~~l~~~~~r----gl---~~~~~-~~~e~~~~~------p~t 520 (617)
-++|||+|||+|..+..|++. +. .|+.+|. +.+++.|.++ |+ +-.++ +..+.++.+ +++
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~---~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDG---KITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGS 147 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTC---EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence 357999999999999999864 44 4555553 4565555433 43 11111 222222222 378
Q ss_pred hhhhhhhhhhhhhhhcCCCcccchhhccccccCcceEEEec
Q 007128 521 YDLLHAWTVFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRD 561 (617)
Q Consensus 521 fDlvh~~~~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~ 561 (617)
||+|.++..-. +....+.++.|+|||||.+++.+
T Consensus 148 fD~I~~d~~~~-------~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 148 YDFGFVDADKP-------NYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCEEEECCchH-------HHHHHHHHHHHhcCCCeEEEEec
Confidence 99998753222 34678999999999999999975
No 489
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=97.62 E-value=5.1e-06 Score=88.96 Aligned_cols=99 Identities=13% Similarity=0.100 Sum_probs=68.8
Q ss_pred eEEEeecccccccccccccc------------------------------------------hhhhhccCCCccchhhhH
Q 007128 216 RTVLDVGCGVASFGAYLLSS------------------------------------------DVITMSLAPNDVHQNQIQ 253 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~------------------------------------------~V~gvDis~~dl~~a~~~ 253 (617)
.+|||.+||+|.++..++.. .|+|+|+++.++..++ +
T Consensus 197 ~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar-~ 275 (385)
T 3ldu_A 197 RVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAR-E 275 (385)
T ss_dssp SCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHH-H
T ss_pred CeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHH-H
Confidence 68999999999887766432 3889999999888887 4
Q ss_pred HHHHhCC--CcccccccccccCCCCCcccccccccccccccc---ccceEEEEecccccC--CceeeecC
Q 007128 254 FALERGI--PAYLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ---RDGILLLELDRLLRP--GGYFAYSS 316 (617)
Q Consensus 254 ~a~~rg~--~~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~~---~~~~~L~el~RvLrP--GG~lvis~ 316 (617)
.+...++ .+.+.+.|+.+++.+ .+||+|+++--...-.. ....+.+++.++||+ ||.+++.+
T Consensus 276 Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 344 (385)
T 3ldu_A 276 NAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLIT 344 (385)
T ss_dssp HHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEE
T ss_pred HHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEE
Confidence 4555566 477888899888765 58999998643211111 122355556666665 77776653
No 490
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.62 E-value=2.3e-05 Score=83.61 Aligned_cols=104 Identities=19% Similarity=0.216 Sum_probs=63.0
Q ss_pred eeEEEeecccccccccccccc---------------------hhhhhccCCCccchhhh------HH-HHHhC--CCccc
Q 007128 215 LRTVLDVGCGVASFGAYLLSS---------------------DVITMSLAPNDVHQNQI------QF-ALERG--IPAYL 264 (617)
Q Consensus 215 ~~~VLDVGCG~G~~~~~L~~~---------------------~V~gvDis~~dl~~a~~------~~-a~~rg--~~~~~ 264 (617)
..+|+|+||++|..+..+... .|..-|+..+|...-.. +. ..+.+ .+..|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 578999999999777665543 12333444444322111 11 11112 12223
Q ss_pred ccc---cccccCCCCCccccccccccccccccccceEEEE--------------------e-------------------
Q 007128 265 GVL---GTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLE--------------------L------------------- 302 (617)
Q Consensus 265 ~~~---d~~~lpf~~~sFDlV~~s~~l~h~~~~~~~~L~e--------------------l------------------- 302 (617)
..+ +...-.||+++||+|+++.+ +||..+.+..+.+ +
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~a-LHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYC-LHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESC-TTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecce-eeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 322 33445789999999999887 7898776555543 2
Q ss_pred cccccCCceeeecChhh
Q 007128 303 DRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 303 ~RvLrPGG~lvis~p~~ 319 (617)
.+.|+|||+++++....
T Consensus 212 a~eL~pGG~mvl~~~gr 228 (384)
T 2efj_A 212 SEELISRGRMLLTFICK 228 (384)
T ss_dssp HHHEEEEEEEEEEEECC
T ss_pred HHHhccCCeEEEEEecC
Confidence 79999999999985544
No 491
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.61 E-value=1.3e-05 Score=83.39 Aligned_cols=102 Identities=9% Similarity=-0.012 Sum_probs=67.2
Q ss_pred eEEEeecccccccccccccc-----hhhhhccCCCccchhhhHHHHHhCC-CcccccccccccCCCC---Ccccccccc-
Q 007128 216 RTVLDVGCGVASFGAYLLSS-----DVITMSLAPNDVHQNQIQFALERGI-PAYLGVLGTKRLPYPS---RSFELAHCS- 285 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~-----~V~gvDis~~dl~~a~~~~a~~rg~-~~~~~~~d~~~lpf~~---~sFDlV~~s- 285 (617)
.+|||+|||+|..+..|++. .|+++|+++..+..++. .+.+.++ ++.+...|+..++... ++||.|++.
T Consensus 104 ~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~-n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~D~ 182 (309)
T 2b9e_A 104 SHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMAT-LLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLDP 182 (309)
T ss_dssp CEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-HHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEECC
T ss_pred CEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCeEEEEeCChHhcCccccccCCCCEEEEcC
Confidence 68999999999998888763 48999999988777763 3444454 5777788887775432 479999862
Q ss_pred ----ccccccccc--------c----------ceEEEEecccccCCceeeecChhh
Q 007128 286 ----RCRIDWLQR--------D----------GILLLELDRLLRPGGYFAYSSPEA 319 (617)
Q Consensus 286 ----~~l~h~~~~--------~----------~~~L~el~RvLrPGG~lvis~p~~ 319 (617)
...+....+ . ..+|..+.++|+ ||+++.++-..
T Consensus 183 PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 183 SCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp CCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred CcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 111111001 0 124666777786 99998865433
No 492
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=97.60 E-value=2.9e-06 Score=90.85 Aligned_cols=120 Identities=12% Similarity=0.063 Sum_probs=70.4
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cccc-chhhhhhh----cccC---Ccchhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GLIG-SIHNWCEA----YSTY---PRTYDLLHA 526 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl~~-~~~~~~e~----~~~~---p~tfDlvh~ 526 (617)
.+|||+|||+|+|+..++..+.. .|+.+|. +.+++.|.+. |+-. .+...+.+ ++.. ..+||+|.+
T Consensus 214 ~~VLDl~cGtG~~sl~la~~ga~--~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~ 291 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMGGAM--ATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIII 291 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHTTBS--EEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEEeeccCHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEE
Confidence 46999999999999999987651 3555553 5666655543 2211 11111111 1111 248999986
Q ss_pred hhhhh-----hhhhcCCCcccchhhccccccCcceEEEecChh------HHHHHHHhhhhcccccc
Q 007128 527 WTVFS-----DIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS------VVDFVKKYLRALNWEAV 581 (617)
Q Consensus 527 ~~~~~-----~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~------~~~~~~~~~~~~~w~~~ 581 (617)
+--.. +.....-++..++.+..++|+|||.+++..... ..+.++..+...+++.+
T Consensus 292 DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~ 357 (385)
T 2b78_A 292 DPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHTYL 357 (385)
T ss_dssp CCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCCEEE
T ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCcEE
Confidence 32110 000000023346677789999999999987654 34456666777766644
No 493
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=97.59 E-value=7e-06 Score=88.15 Aligned_cols=99 Identities=13% Similarity=0.095 Sum_probs=67.1
Q ss_pred eEEEeecccccccccccccc------------------------------------------hhhhhccCCCccchhhhH
Q 007128 216 RTVLDVGCGVASFGAYLLSS------------------------------------------DVITMSLAPNDVHQNQIQ 253 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~------------------------------------------~V~gvDis~~dl~~a~~~ 253 (617)
..|||.+||+|.++..++.. .|+|+|+++.++..++ +
T Consensus 203 ~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar-~ 281 (393)
T 3k0b_A 203 RPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAK-Q 281 (393)
T ss_dssp SCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH-H
T ss_pred CeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHH-H
Confidence 67999999999887665432 2889999999888887 4
Q ss_pred HHHHhCCC--cccccccccccCCCCCccccccccccccccc---cccceEEEEecccccC--CceeeecC
Q 007128 254 FALERGIP--AYLGVLGTKRLPYPSRSFELAHCSRCRIDWL---QRDGILLLELDRLLRP--GGYFAYSS 316 (617)
Q Consensus 254 ~a~~rg~~--~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~---~~~~~~L~el~RvLrP--GG~lvis~ 316 (617)
.+...++. +.+.++|+.+++.+ .+||+|+++--..... .....+..++.++||+ ||.+++.+
T Consensus 282 Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 350 (393)
T 3k0b_A 282 NAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLT 350 (393)
T ss_dssp HHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred HHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 45555653 77888999988876 4899999873211111 1112244445555655 77777654
No 494
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=97.58 E-value=2.7e-06 Score=90.77 Aligned_cols=112 Identities=16% Similarity=0.179 Sum_probs=69.0
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc--c----cchhhhhhhcccCCcchhhhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL--I----GSIHNWCEAYSTYPRTYDLLHAWT 528 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl--~----~~~~~~~e~~~~~p~tfDlvh~~~ 528 (617)
.+|||+|||+|+|+..++... ..|+.+|. +.+++.|.+. |+ + +...++...+..-+.+||+|.++-
T Consensus 211 ~~VLDlg~G~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 211 ERALDVFSYAGGFALHLALGF---REVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp EEEEEETCTTTHHHHHHHHHE---EEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CeEEEeeeccCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 469999999999999999863 35666664 4565555443 32 1 222222111111136899998732
Q ss_pred ---------hhhhhhhcCCCcccchhhccccccCcceEEEecChh------HHHHHHHhhhhccc
Q 007128 529 ---------VFSDIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS------VVDFVKKYLRALNW 578 (617)
Q Consensus 529 ---------~~~~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~------~~~~~~~~~~~~~w 578 (617)
++.... +...++.++.++|+|||.+++..... ..+.+++.+...+.
T Consensus 288 P~~~~~~~~~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~ 348 (382)
T 1wxx_A 288 PAFAKGKKDVERAYR----AYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHR 348 (382)
T ss_dssp CCSCCSTTSHHHHHH----HHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTC
T ss_pred CCCCCChhHHHHHHH----HHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCC
Confidence 222122 34578999999999999999986543 23445555555543
No 495
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=97.57 E-value=2e-05 Score=84.43 Aligned_cols=133 Identities=17% Similarity=0.222 Sum_probs=77.9
Q ss_pred hHHHhhhcchhhHhhhcCC---ceEEEEeecCCC-CCceEEEeecccccchhhhhhhcccC--Ccchhhhhhhhhhhhhh
Q 007128 461 NLMDMKAHLGSFAAALKEK---DVWVMSVVPEDG-PNTLKLIYDRGLIGSIHNWCEAYSTY--PRTYDLLHAWTVFSDIE 534 (617)
Q Consensus 461 ~vLD~g~G~G~fa~~L~~~---~~~v~~v~~~~~-~~~l~~~~~rgl~~~~~~~~e~~~~~--p~tfDlvh~~~~~~~~~ 534 (617)
+|||+|||+|+|+.+++++ +. +|..+|. +.+++.| . .+ +-.+.++..+ +..||+|.++--|....
T Consensus 42 ~vLD~gcGtG~~~~~~~~~~~~~~---~i~gvDi~~~~~~~a-~-~~----~~~~~D~~~~~~~~~fD~Ii~NPPy~~~~ 112 (421)
T 2ih2_A 42 RVLEPACAHGPFLRAFREAHGTAY---RFVGVEIDPKALDLP-P-WA----EGILADFLLWEPGEAFDLILGNPPYGIVG 112 (421)
T ss_dssp EEEEETCTTCHHHHHHHHHHCSCS---EEEEEESCTTTCCCC-T-TE----EEEESCGGGCCCSSCEEEEEECCCCCCBS
T ss_pred EEEECCCCChHHHHHHHHHhCCCC---eEEEEECCHHHHHhC-C-CC----cEEeCChhhcCccCCCCEEEECcCccCcc
Confidence 7999999999999999874 23 5666663 5666655 1 11 1111222222 27899999842221000
Q ss_pred -----------------h-------cCCC-cccchhhccccccCcceEEEecChh-----HHHHHHHhhhhccccccccc
Q 007128 535 -----------------K-------RGCS-GEDLLLEMDRILRPTGFVIIRDKQS-----VVDFVKKYLRALNWEAVATT 584 (617)
Q Consensus 535 -----------------~-------~~c~-~~~~l~Em~RiLrPgG~~ii~~~~~-----~~~~~~~~~~~~~w~~~~~~ 584 (617)
. ..-+ ....+..+.++|+|||.+++-.+.. ..+++++.+...++..+...
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~~~i~~l 192 (421)
T 2ih2_A 113 EASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGKTSVYYL 192 (421)
T ss_dssp CTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHHSEEEEEEE
T ss_pred cccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHhcCCeEEEEC
Confidence 0 0000 1256888999999999998877665 34678888777777332121
Q ss_pred ccCCCCCCCCCCeEEEEEEe
Q 007128 585 ADASSDSDKDGDEVVFIVQK 604 (617)
Q Consensus 585 ~~~~~~~~~~~~~~~l~~~K 604 (617)
. ..-++......+++.+|
T Consensus 193 ~--~~F~~~~~~~~il~~~k 210 (421)
T 2ih2_A 193 G--EVFPQKKVSAVVIRFQK 210 (421)
T ss_dssp E--SCSTTCCCCEEEEEEES
T ss_pred C--CCCCCCCccEEEEEEEe
Confidence 1 11122334556777777
No 496
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=97.55 E-value=8.3e-06 Score=81.48 Aligned_cols=133 Identities=14% Similarity=0.084 Sum_probs=84.8
Q ss_pred cchhhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeeccc-ccchh--hhhh-hcccCCcchhhhhhhhhhh
Q 007128 457 NSLRNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDRGL-IGSIH--NWCE-AYSTYPRTYDLLHAWTVFS 531 (617)
Q Consensus 457 ~~~r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~rgl-~~~~~--~~~e-~~~~~p~tfDlvh~~~~~~ 531 (617)
..-.+|||+|||+|-|+..+. .+. .+...|. +.|++++.++.- .|.-+ ..+. .-...|.+||+|.+..+.+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-~~~---~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLllk~lh 179 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-GIA---SVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIFKLLP 179 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-TCS---EEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEESCHH
T ss_pred CCCCeEEEecCCccHHHHHhc-cCC---eEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHHHHHH
Confidence 456689999999999999877 332 3555553 577777766631 11111 1111 1233459999999887777
Q ss_pred hhhhcCCCcccchhhccccccCcceEEEecChh-----------HHHHHHHhhhhcccccccccccCCCCCCCCCCeEEE
Q 007128 532 DIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS-----------VVDFVKKYLRALNWEAVATTADASSDSDKDGDEVVF 600 (617)
Q Consensus 532 ~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~-----------~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~l 600 (617)
+++..+ ...+.++-.-|+|+|.||--++.+ ..+..+..+..-.|.+ .... .+.|.+.
T Consensus 180 ~LE~q~---~~~~~~ll~aL~~~~vvVsfPtksl~Gr~~gm~~~Y~~~~e~~~~~~~~~~--~~~~-------~~nEl~~ 247 (253)
T 3frh_A 180 LLEREQ---AGSAMALLQSLNTPRMAVSFPTRSLGGRGKGMEANYAAWFEGGLPAEFEIE--DKKT-------IGTELIY 247 (253)
T ss_dssp HHHHHS---TTHHHHHHHHCBCSEEEEEEECC-----------CHHHHHHHHSCTTEEEE--EEEE-------ETTEEEE
T ss_pred Hhhhhc---hhhHHHHHHHhcCCCEEEEcChHHhcCCCcchhhHHHHHHHHHhhccchhh--hhee-------cCceEEE
Confidence 776332 224446777999999999888443 3344666666677766 3332 4568888
Q ss_pred EEEec
Q 007128 601 IVQKK 605 (617)
Q Consensus 601 ~~~K~ 605 (617)
+.+|.
T Consensus 248 ~i~~~ 252 (253)
T 3frh_A 248 LIKKN 252 (253)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 88773
No 497
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.51 E-value=6.9e-06 Score=91.77 Aligned_cols=119 Identities=17% Similarity=0.109 Sum_probs=76.9
Q ss_pred hHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc----------------------hhhhhccCCCccchh
Q 007128 193 KYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS----------------------DVITMSLAPNDVHQN 250 (617)
Q Consensus 193 ~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~----------------------~V~gvDis~~dl~~a 250 (617)
...+.+.+++.. .. +.+|||.+||+|.++..+++. .++|+|+++.++..+
T Consensus 156 ~iv~~mv~~l~p------~~--~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA 227 (541)
T 2ar0_A 156 PLIKTIIHLLKP------QP--REVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA 227 (541)
T ss_dssp HHHHHHHHHHCC------CT--TCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHH
T ss_pred HHHHHHHHHhcc------CC--CCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHH
Confidence 345566666653 22 368999999999887665432 478888888776666
Q ss_pred hhHHHHHhCCC------cccccccccccC-CCCCccccccccccccccccc-------------cceEEEEecccccCCc
Q 007128 251 QIQFALERGIP------AYLGVLGTKRLP-YPSRSFELAHCSRCRIDWLQR-------------DGILLLELDRLLRPGG 310 (617)
Q Consensus 251 ~~~~a~~rg~~------~~~~~~d~~~lp-f~~~sFDlV~~s~~l~h~~~~-------------~~~~L~el~RvLrPGG 310 (617)
+..... +++. ..+..+|+...+ .....||+|+++--+...... ...++..+.+.|+|||
T Consensus 228 ~~nl~l-~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gG 306 (541)
T 2ar0_A 228 LMNCLL-HDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGG 306 (541)
T ss_dssp HHHHHT-TTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEE
T ss_pred HHHHHH-hCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCC
Confidence 543332 3443 456667765443 345689999986432111000 0136778899999999
Q ss_pred eeeecChhhh
Q 007128 311 YFAYSSPEAY 320 (617)
Q Consensus 311 ~lvis~p~~~ 320 (617)
++++..|...
T Consensus 307 r~a~V~p~~~ 316 (541)
T 2ar0_A 307 RAAVVVPDNV 316 (541)
T ss_dssp EEEEEEEHHH
T ss_pred EEEEEecCcc
Confidence 9999877653
No 498
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=97.49 E-value=1.4e-06 Score=93.39 Aligned_cols=117 Identities=12% Similarity=0.114 Sum_probs=68.3
Q ss_pred hhHHHhhhcchhhHhhhcCCceEEEEeecCCC-CCceEEEeec----cc-ccchhhhhhh----cccC---Ccchhhhhh
Q 007128 460 RNLMDMKAHLGSFAAALKEKDVWVMSVVPEDG-PNTLKLIYDR----GL-IGSIHNWCEA----YSTY---PRTYDLLHA 526 (617)
Q Consensus 460 r~vLD~g~G~G~fa~~L~~~~~~v~~v~~~~~-~~~l~~~~~r----gl-~~~~~~~~e~----~~~~---p~tfDlvh~ 526 (617)
.+|||+|||+|+|+..++..+. ..|+.+|. +.+++.|.++ |+ -..+...+.+ ++.+ +.+||+|.+
T Consensus 222 ~~VLDl~cG~G~~sl~la~~g~--~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~ 299 (396)
T 3c0k_A 222 KRVLNCFSYTGGFAVSALMGGC--SQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVM 299 (396)
T ss_dssp CEEEEESCTTCSHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEeeccCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEE
Confidence 3699999999999999998863 14555553 4555444332 22 1111111111 1111 368999987
Q ss_pred hhhhh-----hhhhcCCCcccchhhccccccCcceEEEecChh------HHHHHHHhhhhccc
Q 007128 527 WTVFS-----DIEKRGCSGEDLLLEMDRILRPTGFVIIRDKQS------VVDFVKKYLRALNW 578 (617)
Q Consensus 527 ~~~~~-----~~~~~~c~~~~~l~Em~RiLrPgG~~ii~~~~~------~~~~~~~~~~~~~w 578 (617)
+--+. ++.....+...++.++.++|+|||.++++.... ..+.+++.+...++
T Consensus 300 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~ 362 (396)
T 3c0k_A 300 DPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGR 362 (396)
T ss_dssp CCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCC
Confidence 52210 011111245578889999999999999866543 33445555555553
No 499
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.46 E-value=1.4e-05 Score=85.49 Aligned_cols=100 Identities=15% Similarity=0.111 Sum_probs=68.1
Q ss_pred eEEEeecccccccccccccc------------------------------------------hhhhhccCCCccchhhhH
Q 007128 216 RTVLDVGCGVASFGAYLLSS------------------------------------------DVITMSLAPNDVHQNQIQ 253 (617)
Q Consensus 216 ~~VLDVGCG~G~~~~~L~~~------------------------------------------~V~gvDis~~dl~~a~~~ 253 (617)
..|||.+||+|.++...+.. .|+|+|+++.++..++ +
T Consensus 196 ~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar-~ 274 (384)
T 3ldg_A 196 KPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIAR-K 274 (384)
T ss_dssp SCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH-H
T ss_pred CeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHH-H
Confidence 68999999999887665431 2889999998888887 4
Q ss_pred HHHHhCCC--cccccccccccCCCCCccccccccccccccc---cccceEEEEecccccC--CceeeecCh
Q 007128 254 FALERGIP--AYLGVLGTKRLPYPSRSFELAHCSRCRIDWL---QRDGILLLELDRLLRP--GGYFAYSSP 317 (617)
Q Consensus 254 ~a~~rg~~--~~~~~~d~~~lpf~~~sFDlV~~s~~l~h~~---~~~~~~L~el~RvLrP--GG~lvis~p 317 (617)
.+...++. +.+.+.|+.+++.+ .+||+|+++--.-.-. .+...+..++.+.||+ ||.+++.++
T Consensus 275 Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 275 NAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTN 344 (384)
T ss_dssp HHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEEC
Confidence 55556653 67888899988876 4899999873211111 1112344455566665 887777544
No 500
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.45 E-value=3.2e-05 Score=79.19 Aligned_cols=72 Identities=13% Similarity=0.202 Sum_probs=54.2
Q ss_pred hHHHHHHhHhcCCCCCCCCCCceeEEEeecccccccccccccc--h----hhhhccCCCccchhhhHHHHHhCCCccccc
Q 007128 193 KYIASIANMLNFSNDNINNEGRLRTVLDVGCGVASFGAYLLSS--D----VITMSLAPNDVHQNQIQFALERGIPAYLGV 266 (617)
Q Consensus 193 ~Y~~~l~~lL~~~~~~l~~~~~~~~VLDVGCG~G~~~~~L~~~--~----V~gvDis~~dl~~a~~~~a~~rg~~~~~~~ 266 (617)
...+.+.+.+.. ..+ .+|||||||+|.++..|++. . |+++|+++.++..++.+ + ..++.+..
T Consensus 29 ~i~~~iv~~~~~------~~~--~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~-~---~~~v~~i~ 96 (279)
T 3uzu_A 29 GVIDAIVAAIRP------ERG--ERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQR-F---GELLELHA 96 (279)
T ss_dssp HHHHHHHHHHCC------CTT--CEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHH-H---GGGEEEEE
T ss_pred HHHHHHHHhcCC------CCc--CEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHh-c---CCCcEEEE
Confidence 455667777765 333 68999999999999999875 4 99999999887776644 2 34577888
Q ss_pred ccccccCCCC
Q 007128 267 LGTKRLPYPS 276 (617)
Q Consensus 267 ~d~~~lpf~~ 276 (617)
+|+..+++++
T Consensus 97 ~D~~~~~~~~ 106 (279)
T 3uzu_A 97 GDALTFDFGS 106 (279)
T ss_dssp SCGGGCCGGG
T ss_pred CChhcCChhH
Confidence 8988888753
Done!