Citrus Sinensis ID: 007129

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------
Protein Sequence
MLIIYCFLFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVFYRFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYAVCNMNSNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTRFSLVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRMAASELDDIERKKPKKKKKVAIVITSVLLVTGVILLGGFVYLWKRRHRKQGKTDGSSKLDYNDRGNREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFFFSFENLSLVDRN
Secondary Structure (PSIPRED)
cEEEEHHHHHcccccccccccccccccccccEEEccccEEEEEEcccccccccEEEEEccccccccEEEEccccccccccccEEEEEEcccEEEEEEcccccEEEEEcccccccccEEEEEccccEEEEccccccccccccccccccccccccccEEEEEEcccccEEEEEccccccccccEEEEEEccccccEEEEEEccEEEEEEccccccEEEccccccccccEEEEEEEcccEEEEEEEEccccEEEEEEEcccccEEEEEEEcccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccEEEcccccccccccEEEEccccHHHHHHHHHcccccccccccccccccccEEEEcccccccccccccccEEEEEEEccccccccccccccccEEEEEEEHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccEEEEEEccccEEEEEEccccccccHHHHHHHHHHHHcccccccccEEcccccccEEEEEEEEcccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEHHHHHHHHHHccccccccccccccccEEEccccEEEEEEEcccccccEEEEEEEEcccccEEEEEEccccccccccEEEEEEccccEEEEEEEccccEEEEccccccccccHEEEcccccEEEEEccccccccEEEEEccccccccccccccccccccccccEEEccccccccccccEEEEEccccccEEEEEcccEEEEEccccccEEEccccccccccEEEEEEEEcccEEEEEEEEEcccEEEEEEEccccEEEEEEEEcccccEEEEEEcccccccccccHcHcccccEEcccccccccccccccccccHHHHHccccccccEEcccccccccccEEEEccccccccccEEEcccccHHHHHHHHHHcccEEEEEEEcccccccEEEEEEccHHHHHHcccccccEEEEEEHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEcHHHHHHHHcccccccccccccccccEccEcccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEcccccccEEEEccccccccccHHHEEEEcccccccc
Coil and Loop (DISEMBL)
MLIIYCFLFYTIRTAtardtlnlgqsirdgetlvsanesfelgffspgksksryLGIWYKKIGNGTVIWVAnrdaplsdrsgalnissqgNATLVLLNSTngivwssnasrtarNPVAVLLEsgnlvvkdgkdidpdnflwqsfdypshILIAGMKLGVNLVTGLNRFISswksaddpaqddyvygidpsgvpqavfrkgstiryragswnglhwtgmpqlqpnpvytfeyvsneneVFYRFNLikssvpsmmvmnplgdpqrltwmeqtqkwapfvpfsglildqcdnyaLCGAYAVCnmnsnsakceclegfvpkspsewdlldksdgcvrrtqldcehgdgflkresvklpdtrfslvDNKISLLECKelcskncsctayanadvrgggsgcllwfhDLIDMKELSESGQDLFVRMAASElddierkkpkkkkKVAIVITSVLLVTGVILLGGFVYLWKRrhrkqgktdgsskldyndrgnreeemelpiFDWMAIANAtenfsdknklgeggfgpvykgVLIEGQEIAAKRLSkssgqgmeEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEylpnkslndfIFGFLYTEHFFWSFFfsfenlslvdrn
Flexible Loop (DISEMBL)
MLIIYCFLFYTIRTATARDTLNLGQSIRDGETLVSAnesfelgffspgksksrYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVFYRFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYAVCNMNSNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLdcehgdgflkresvklpdtrfSLVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRMAAselddierkkpkkkkkvaiVITSVLLVTGVILLGGFVYLWKrrhrkqgktdgsskldyndrgnreeEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFFFSfenlslvdrn
Low Complexity Region (SEG)
MLIIYCFLFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVFYRFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYAVCNMNSNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTRFSLVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRMAASELDDIERkkpkkkkkVAivitsvllvtgvillggFVYLWKRRHRKQGKTDGSSKLDYNDRGNREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHffwsfffsfENLSLVDRN
Disordered region (IsUnstruct)
*LIIYCFLFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPL*****ALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVFYRFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYAVCNMNSNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTRFSLVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKEL******LF**********************AIVITSVLLVTGVILLGGFVYLWKR***************************LPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIA**************FENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFFFSFENLSL****
Disordered Region (DISOPRED)
MLIIYCFLFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTA*NPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVFYRFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYAVCNMNSNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTRFSLVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRMAAS**************KVAIVITSVLLVTGVILLGGFVYLWKRR**************************LPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFFFSFENLSLVDRN
Disordered Region (DISEMBL)
MLIIYCFLFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVFYRFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYAVCNMNSNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTRFSLVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRMAASELDDIE*********VAIVITSVLLVTGVILLGGFVYLWKRRH***********LDYNDRGNREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFFFSFENLSLVDRN
Disordered Region (DISPRO)
MLIIYCFLFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVFYRFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYAVCNMNSNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTRFSLVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRMAASELDDIERKKPKKKKKVAIVITSVLLVTGVILLGGFVYLWKRRHRKQGK*****************EMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFFFSFENLSL****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLIIYCFLFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVFYRFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYAVCNMNSNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTRFSLVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRMAASELDDIERKKPKKKKKVAIVITSVLLVTGVILLGGFVYLWKRRHRKQGKTDGSSKLDYNDRGNREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFFFSFENLSLVDRN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	617	2.2.26 [Sep-21-2011]
O81832	783	G-type lectin S-receptor-	yes	no	0.870	0.685	0.491	1e-162
O81905	850	Receptor-like serine/thre	no	no	0.940	0.682	0.428	1e-141
Q09092	857	Putative serine/threonine	N/A	no	0.952	0.686	0.420	1e-135
Q9ZT07	833	G-type lectin S-receptor-	no	no	0.914	0.677	0.422	1e-132
Q9S972	847	Receptor-like serine/thre	no	no	0.922	0.671	0.415	1e-131
Q9LPZ3	845	G-type lectin S-receptor-	no	no	0.914	0.667	0.417	1e-129
Q39086	843	Receptor-like serine/thre	no	no	0.917	0.671	0.420	1e-128
O81833	815	G-type lectin S-receptor-	no	no	0.873	0.661	0.439	1e-123
O81906	849	G-type lectin S-receptor-	no	no	0.930	0.676	0.392	1e-120
P0DH86	853	G-type lectin S-receptor-	no	no	0.910	0.658	0.414	1e-119

>sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=3 SV=4

 Score =  573 bits (1476), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 294/598 (49%), Positives = 394/598 (65%), Gaps = 61/598 (10%)

Query: 1   MLIIYCFLFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYK 60
           +LII   LF TI  A A D L   Q+++DG+T+VS   SFE+GFFSPG S++RYLGIWYK
Sbjct: 9   LLIIS--LFSTILLAQATDILIANQTLKDGDTIVSQGGSFEVGFFSPGGSRNRYLGIWYK 66

Query: 61  KIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASR-----TARN 115
           KI   TV+WVANRD+PL D SG L +S   N +L L N  N I+WSS++S      + RN
Sbjct: 67  KISLQTVVWVANRDSPLYDLSGTLKVSE--NGSLCLFNDRNHIIWSSSSSPSSQKASLRN 124

Query: 116 PVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSA 175
           P+  +L++GNLVV++  D D D ++WQS DYP  + + GMK G+N VTGLNRF++SW++ 
Sbjct: 125 PIVQILDTGNLVVRNSGD-DQD-YIWQSLDYPGDMFLPGMKYGLNFVTGLNRFLTSWRAI 182

Query: 176 DDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNE 235
           DDP+  +Y   +DP+GVPQ   +K S + +R G WNGL +TGMP L+PNP+Y +EYV  E
Sbjct: 183 DDPSTGNYTNKMDPNGVPQFFLKKNSVVVFRTGPWNGLRFTGMPNLKPNPIYRYEYVFTE 242

Query: 236 NEVFYRFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGA 295
            EV+Y + L   SV + M +NP G  QR TW++  Q W  ++     ++D CD Y LCG+
Sbjct: 243 EEVYYTYKLENPSVLTRMQLNPNGALQRYTWVDNLQSWNFYL---SAMMDSCDQYTLCGS 299

Query: 296 YAVCNMNSNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHG-DGFLKRESVKLP 354
           Y  CN+N + A C CL+GFV K+P  W   D S+GCVRR +LDC  G DGFLK   +KLP
Sbjct: 300 YGSCNINESPA-CRCLKGFVAKTPQAWVAGDWSEGCVRRVKLDCGKGEDGFLKISKLKLP 358

Query: 355 DTRFSLVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQD 414
           DTR S  D  + L ECK++C +NC+C+AY+  D+R GG GC+LWF DLID++E +E+GQD
Sbjct: 359 DTRTSWYDKNMDLNECKKVCLRNCTCSAYSPFDIRDGGKGCILWFGDLIDIREYNENGQD 418

Query: 415 LFVRMAASELDDIERKKPKKKKKVAIVITSVLLVTGVILLGGFVYLWKRRHRKQGKTDGS 474
           L+VR+A+SE++ ++R+                                           S
Sbjct: 419 LYVRLASSEIETLQRE-------------------------------------------S 435

Query: 475 SKLDYNDRGNREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAK 534
           S++  + R   EE++ELP  D   ++ AT  FS  NKLG+GGFGPVYKG L  GQE+A K
Sbjct: 436 SRV--SSRKQEEEDLELPFLDLDTVSEATSGFSAGNKLGQGGFGPVYKGTLACGQEVAVK 493

Query: 535 RLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
           RLS++S QG+EEF+NE+ LIAKLQHRNLVK++G C   +ERMLIYEY PNKSL+ FIF
Sbjct: 494 RLSRTSRQGVEEFKNEIKLIAKLQHRNLVKILGYCVDEEERMLIYEYQPNKSLDSFIF 551

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana GN=SD18 PE=1 SV=1

 Score =  502 bits (1292), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 266/621 (42%), Positives = 380/621 (61%), Gaps = 41/621 (6%)

Query: 15  ATARDTLNLGQS--IRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVAN 72
           + + +TL+  +S  I    T+VS    FELGFF PG     YLGIWYK I   T +WVAN
Sbjct: 26  SISANTLSASESLTISSNNTIVSPGNVFELGFFKPGLDSRWYLGIWYKAISKRTYVWVAN 85

Query: 73  RDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASR-TARNP-VAVLLESGNLVVKD 130
           RD PLS   G L IS   ++ LV+L+ ++  VWS+N +    R+P VA LL++GN V++D
Sbjct: 86  RDTPLSSSIGTLKIS---DSNLVVLDQSDTPVWSTNLTGGDVRSPLVAELLDNGNFVLRD 142

Query: 131 GKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQDDYVYGIDPS 190
            K+  PD  LWQSFD+P+  L+  MKLG +  TG NRFI SWKS DDP+  D+ + ++  
Sbjct: 143 SKNSAPDGVLWQSFDFPTDTLLPEMKLGWDAKTGFNRFIRSWKSPDDPSSGDFSFKLETE 202

Query: 191 GVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVFYRFNLIKSSVP 250
           G P+       +  YR+G WNG+ ++G+P++QP     F + +++ EV Y F + KS V 
Sbjct: 203 GFPEIFLWNRESRMYRSGPWNGIRFSGVPEMQPFEYMVFNFTTSKEEVTYSFRITKSDVY 262

Query: 251 SMMVMNPLGDPQRLTWMEQTQKWAPF--VPFSGLILDQCDNYALCGAYAVCNMNSNSAKC 308
           S + ++  G  QR TW+E  Q W  F   P      DQCD Y  CG Y  C+ N+ S  C
Sbjct: 263 SRLSISSSGLLQRFTWIETAQNWNQFWYAP-----KDQCDEYKECGVYGYCDSNT-SPVC 316

Query: 309 ECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTRFSLVDNKISLL 368
            C++GF P++P  W L D SDGCVR+T L C  GDGF++ + +KLPDT  + VD  I + 
Sbjct: 317 NCIKGFKPRNPQVWGLRDGSDGCVRKTLLSCGGGDGFVRLKKMKLPDTTTASVDRGIGVK 376

Query: 369 ECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRMAASELDDIE 428
           EC++ C ++C+CTA+AN D+RG GSGC+ W  +L D++  ++ GQDL+VR+AA++L+D  
Sbjct: 377 ECEQKCLRDCNCTAFANTDIRGSGSGCVTWTGELFDIRNYAKGGQDLYVRLAATDLED-- 434

Query: 429 RKKPKKKKKVAIVITSVLLVTGVILLGGFV-YLWKRRHRKQGKTDG--------SSKLDY 479
                K+ + A +I S + V+ ++LL   + +LWKR+ ++    +         S  L  
Sbjct: 435 -----KRNRSAKIIGSSIGVSVLLLLSFIIFFLWKRKQKRSILIETPIVDHQLRSRDLLM 489

Query: 480 ND----------RGNREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQ 529
           N+          R N  +++ELP+ ++  +A AT NFS+ NKLG+GGFG VYKG L++GQ
Sbjct: 490 NEVVISSRRHISRENNTDDLELPLMEFEEVAMATNNFSNANKLGQGGFGIVYKGKLLDGQ 549

Query: 530 EIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLND 589
           E+A KRLSK+S QG +EF+NEV LIA+LQH NLV+L+ CC    E+MLIYEYL N SL+ 
Sbjct: 550 EMAVKRLSKTSVQGTDEFKNEVKLIARLQHINLVRLLACCVDAGEKMLIYEYLENLSLDS 609

Query: 590 FIFGFLYTEHFFWSFFFSFEN 610
            +F         W   F   N
Sbjct: 610 HLFDKSRNSKLNWQMRFDIIN 630

Involved in the regulation of cellular expansion and differentiation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q09092|SRK6_BRAOE Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=2

 Score =  482 bits (1240), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 266/633 (42%), Positives = 387/633 (61%), Gaps = 45/633 (7%)

Query: 1   MLIIYCFLFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSR-YLGIWY 59
           M++I+  L   I T ++ ++L    +I   +TLVS    FE+GFF   ++ SR YLG+WY
Sbjct: 22  MILIHPALSIYINTLSSTESL----TISSNKTLVSPGSIFEVGFF---RTNSRWYLGMWY 74

Query: 60  KKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASR-TARNPV- 117
           KK+ + T +WVANRD PLS+  G L IS  GN  LVLL+ +N  VW +N +R   R+PV 
Sbjct: 75  KKVSDRTYVWVANRDNPLSNAIGTLKIS--GN-NLVLLDHSNKPVWWTNLTRGNERSPVV 131

Query: 118 AVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADD 177
           A LL +GN V++D  + D   +LWQSFDYP+  L+  MKLG NL TGLNRF++SW+S+DD
Sbjct: 132 AELLANGNFVMRDSSNNDASEYLWQSFDYPTDTLLPEMKLGYNLKTGLNRFLTSWRSSDD 191

Query: 178 PAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENE 237
           P+  ++ Y ++   +P+    + +   +R+G WNG+ ++G+P+ Q      + ++ N  E
Sbjct: 192 PSSGNFSYKLETQSLPEFYLSRENFPMHRSGPWNGIRFSGIPEDQKLSYMVYNFIENNEE 251

Query: 238 VFYRFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYA 297
           V Y F +  +S  S + +   G  QRLTW    + W  F  +S  +  QCD Y +CG YA
Sbjct: 252 VAYTFRMTNNSFYSRLTLISEGYFQRLTWYPSIRIWNRF--WSSPVDPQCDTYIMCGPYA 309

Query: 298 VCNMNSNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTR 357
            C++N+ S  C C++GF P++  +WD    + GC+RRTQL C  GDGF + + +KLP+T 
Sbjct: 310 YCDVNT-SPVCNCIQGFNPRNIQQWDQRVWAGGCIRRTQLSCS-GDGFTRMKKMKLPETT 367

Query: 358 FSLVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSES---GQD 414
            + VD  I + ECK+ C  +C+CTA+ANAD+R GGSGC++W   L D++  +     GQD
Sbjct: 368 MATVDRSIGVKECKKRCISDCNCTAFANADIRNGGSGCVIWTERLEDIRNYATDAIDGQD 427

Query: 415 LFVRMAASELDDIERKKPKKKKKVAIVITSVLLVTGVILLGGFVYLWKRRHRKQ------ 468
           L+VR+AA+++         KK+  +  I S+ +   V+LL     LWKR+ ++       
Sbjct: 428 LYVRLAAADI--------AKKRNASGKIISLTVGVSVLLLLIMFCLWKRKQKRAKASAIS 479

Query: 469 -GKTDGSSKLDYND---RGNRE-------EEMELPIFDWMAIANATENFSDKNKLGEGGF 517
              T  +  L  N+      RE       EE+ELP+ +   +  ATENFS  NKLG+GGF
Sbjct: 480 IANTQRNQNLPMNEMVLSSKREFSGEYKFEELELPLIEMETVVKATENFSSCNKLGQGGF 539

Query: 518 GPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML 577
           G VYKG L++G+EIA KRLSK+S QG +EF NEV LIA+LQH NLV+++GCC + DE+ML
Sbjct: 540 GIVYKGRLLDGKEIAVKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKML 599

Query: 578 IYEYLPNKSLNDFIFGFLYTEHFFWSFFFSFEN 610
           IYEYL N SL+ ++FG        W+  F   N
Sbjct: 600 IYEYLENLSLDSYLFGKTRRSKLNWNERFDITN 632

Involved in sporophytic self-incompatibility system (the inability of flowering plants to achieve self-fertilization), probably acting in combination with S-locus-specific glycoproteins. Interaction with a ligand in the extracellular domain triggers the protein kinase activity of the cytoplasmic domain.

Brassica oleracea var. acephala (taxid: 3713)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ZT07|RKS1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS=Arabidopsis thaliana GN=RKS1 PE=2 SV=3

 Score =  471 bits (1212), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 250/592 (42%), Positives = 363/592 (61%), Gaps = 28/592 (4%)

Query: 19  DTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLS 78
           DT+   QS+RDGE ++SA + F  GFFS G S+ RY+GIWY +I   T++WVANRD P++
Sbjct: 20  DTIMRRQSLRDGEVILSAGKRFAFGFFSLGDSELRYVGIWYAQISQQTIVWVANRDHPIN 79

Query: 79  DRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNP--VAVLLESGNLVVKDGKDIDP 136
           D SG +  S++GN ++   ++   ++WS+N S +   P  VA L + GNLV+ D   +  
Sbjct: 80  DTSGMVKFSNRGNLSVYASDNETELIWSTNVSDSMLEPTLVATLSDLGNLVLFD--PVTG 137

Query: 137 DNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAV 196
            +F W+SFD+P+   +  M+LG     GL+R ++SWKS  DP   D +  ++  G PQ +
Sbjct: 138 RSF-WESFDHPTDTFLPFMRLGFTRKDGLDRSLTSWKSHGDPGSGDLILRMERRGFPQLI 196

Query: 197 FRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVFYRFNLIKSSVPSMMVMN 256
             KG T  +R GSW G  W+G+P++    ++   +V+NE+EV + + +  +SV +  ++N
Sbjct: 197 LYKGVTPWWRMGSWTGHRWSGVPEMPIGYIFNNSFVNNEDEVSFTYGVTDASVITRTMVN 256

Query: 257 PLGDPQRLTWMEQTQKWAPF--VPFSGLILDQCDNYALCGAYAVCNM-NSNSAKCECLEG 313
             G   R TW+ + ++W  F  VP      +QCDNYA CG    C+  +S + +C CL G
Sbjct: 257 ETGTMHRFTWIARDKRWNDFWSVP-----KEQCDNYAHCGPNGYCDSPSSKTFECTCLPG 311

Query: 314 FVPKSPSEWDLLDKSDGCVRRTQLD-CEHGDGFLKRESVKLPDTRFSLVDNKISLLECKE 372
           F PK P  W L D S GC ++ +   C   DGF+K + +K+PDT  + VD  I+L ECK+
Sbjct: 312 FEPKFPRHWFLRDSSGGCTKKKRASICSEKDGFVKLKRMKIPDTSDASVDMNITLKECKQ 371

Query: 373 LCSKNCSCTAYANA--DVRGGGSGCLLWFHDLIDMKELSESGQDLFVRMAASELDDIERK 430
            C KNCSC AYA+A  + + G  GCL W   ++D +    SGQD ++R+   EL    R 
Sbjct: 372 RCLKNCSCVAYASAYHESKRGAIGCLKWHGGMLDARTYLNSGQDFYIRVDKEELARWNRN 431

Query: 431 KPKKKKKVAIVITSVLLVTGVILLGGFVYLWKRRHRKQGKTDGSSK------LDYNDRGN 484
               K++V +++ S  L+  V+LL   ++   R  RK  +   SS        D+++   
Sbjct: 432 GLSGKRRVLLILIS--LIAAVMLLTVILFCVVRERRKSNRHRSSSANFAPVPFDFDESFR 489

Query: 485 REEE----MELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSS 540
            E++     ELP+FD   I  AT NFS +NKLG GGFGPVYKGVL    EIA KRLS++S
Sbjct: 490 FEQDKARNRELPLFDLNTIVAATNNFSSQNKLGAGGFGPVYKGVLQNRMEIAVKRLSRNS 549

Query: 541 GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
           GQGMEEF+NEV LI+KLQHRNLV+++GCC + +E+ML+YEYLPNKSL+ FIF
Sbjct: 550 GQGMEEFKNEVKLISKLQHRNLVRILGCCVELEEKMLVYEYLPNKSLDYFIF 601

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9S972|SD16_ARATH Receptor-like serine/threonine-protein kinase SD1-6 OS=Arabidopsis thaliana GN=SD16 PE=1 SV=2

 Score =  468 bits (1205), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 252/607 (41%), Positives = 366/607 (60%), Gaps = 38/607 (6%)

Query: 26  SIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALN 85
           +I   +T++S ++ FELGFF+P  S   YLGIWYK I   T +WVANRD PLS  +G L 
Sbjct: 37  TISSNKTIISPSQIFELGFFNPDSSSRWYLGIWYKIIPIRTYVWVANRDNPLSSSNGTLK 96

Query: 86  ISSQGNATLVLLNSTNGIVWSSNAS-RTARNPVAV-LLESGNLVVKDGKDIDPDNFLWQS 143
           IS   +  LV+ + ++  VWS+N +    R+PVA  LL+ GN V++D K+  P  FLWQS
Sbjct: 97  IS---DNNLVIFDQSDRPVWSTNITGGDVRSPVAAELLDYGNFVLRDSKNNKPSGFLWQS 153

Query: 144 FDYPSHILIAGMKLG-VNLVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGST 202
           FD+P+  L++ MK+G  N   G NR + SWK+ DDP+  D+   +  SG P+       +
Sbjct: 154 FDFPTDTLLSDMKMGWDNKSGGFNRILRSWKTTDDPSSGDFSTKLRTSGFPEFYIYNKES 213

Query: 203 IRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVFYRFNLIKSSVPSMMVMNPLGDPQ 262
           I YR+G W G  ++ +P ++P       +  N  +V Y + + K+++ S++ ++  G  Q
Sbjct: 214 ITYRSGPWLGNRFSSVPGMKPVDYIDNSFTENNQQVVYSYRVNKTNIYSILSLSSTGLLQ 273

Query: 263 RLTWMEQTQKWAP--FVPFSGLILDQCDNYALCGAYAVCNMNSNSAKCECLEGFVPKSPS 320
           RLTWME  Q W    + P      D CDNY  CG Y  C+ N+ S  C C++GF P +  
Sbjct: 274 RLTWMEAAQSWKQLWYSP-----KDLCDNYKECGNYGYCDANT-SPICNCIKGFEPMN-E 326

Query: 321 EWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTRFSLVDNKISLLECKELCSKNCSC 380
           +  L D S GCVR+T+L C+  DGF++ + ++LPDT  + VD  I L EC+E C K C+C
Sbjct: 327 QAALRDDSVGCVRKTKLSCDGRDGFVRLKKMRLPDTTETSVDKGIGLKECEERCLKGCNC 386

Query: 381 TAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRMAASELDDIERKKPKKKKKVAI 440
           TA+AN D+R GGSGC++W   L D++  ++ GQDL+VR+AA +L+D +R K KK    +I
Sbjct: 387 TAFANTDIRNGGSGCVIWSGGLFDIRNYAKGGQDLYVRVAAGDLED-KRIKSKKIIGSSI 445

Query: 441 VITSVLLVTGVILLGGFVYLWKRRHRKQGKTDG-----------------SSKLDYNDRG 483
            ++ +LL++ +I      + WKR+ ++                        +   Y  + 
Sbjct: 446 GVSILLLLSFIIF-----HFWKRKQKRSITIQTPIVDLVRSQDSLMNELVKASRSYTSKE 500

Query: 484 NREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQG 543
           N+ + +ELP+ +W A+A AT NFS  NKLG+GGFG VYKG+L++G+EIA KRLSK S QG
Sbjct: 501 NKTDYLELPLMEWKALAMATNNFSTDNKLGQGGFGIVYKGMLLDGKEIAVKRLSKMSSQG 560

Query: 544 MEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWS 603
            +EF NEV LIAKLQH NLV+L+GCC  + E+MLIYEYL N SL+  +F    + +  W 
Sbjct: 561 TDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEYLENLSLDSHLFDQTRSSNLNWQ 620

Query: 604 FFFSFEN 610
             F   N
Sbjct: 621 KRFDIIN 627

Involved in the regulation of cellular expansion and differentiation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LPZ3|Y1141_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 OS=Arabidopsis thaliana GN=At1g11410 PE=3 SV=3

 Score =  462 bits (1189), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 249/597 (41%), Positives = 358/597 (59%), Gaps = 33/597 (5%)

Query: 19  DTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLS 78
           +T+   QS++DG+ + S  + F  GFFS G SK RY+GIWY ++   T++WVANRD P++
Sbjct: 23  NTILRSQSLKDGDVIYSEGKRFAFGFFSLGNSKLRYVGIWYAQVSEQTIVWVANRDHPIN 82

Query: 79  DRSGALNISSQGNATLVLLNSTNGI--VWSSNASRTARNP--VAVLLESGNLVVKDGKDI 134
           D SG +  S++GN  L +  S NG   +WS++     + P  VA L + GNLV+     +
Sbjct: 83  DTSGLIKFSTRGN--LCVYASGNGTEPIWSTDVIDMIQEPALVAKLSDLGNLVL-----L 135

Query: 135 DP--DNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQDDYVYGIDPSGV 192
           DP      W+SF++P++ L+  MK G    +G++R ++SW+S  DP   +  Y I+  G 
Sbjct: 136 DPVTGKSFWESFNHPTNTLLPFMKFGFTRQSGVDRIMTSWRSPGDPGSGNITYRIERRGF 195

Query: 193 PQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVFYRFNLIKSSVPSM 252
           PQ +  KG T+ +R GSW G  W+G+P++    ++   +V+N +EV   + ++ +SV + 
Sbjct: 196 PQMMMYKGLTLWWRTGSWTGQRWSGVPEMTNKFIFNISFVNNPDEVSITYGVLDASVTTR 255

Query: 253 MVMNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYAVCNMNSNSA-KCECL 311
           MV+N  G  QR  W  + +KW   + F     D+CD Y  CG    C+  S    +C CL
Sbjct: 256 MVLNETGTLQRFRWNGRDKKW---IGFWSAPEDKCDIYNHCGFNGYCDSTSTEKFECSCL 312

Query: 312 EGFVPKSPSEWDLLDKSDGCVR-RTQLDCEHGDGFLKRESVKLPDTRFSLVDNKISLLEC 370
            G+ PK+P +W L D SDGC R +    C   +GF K + VK+P+T    VD  I+L EC
Sbjct: 313 PGYEPKTPRDWFLRDASDGCTRIKADSICNGKEGFAKLKRVKIPNTSAVNVDMNITLKEC 372

Query: 371 KELCSKNCSCTAYANA--DVRGGGSGCLLWFHDLIDMKELSESGQDLFVRMAASELDDIE 428
           ++ C KNCSC AYA+A  + + G  GCL W  +++D +    SGQD ++R+  SEL    
Sbjct: 373 EQRCLKNCSCVAYASAYHESQDGAKGCLTWHGNMLDTRTYLSSGQDFYLRVDKSELARWN 432

Query: 429 RKKPKKKKKVAIVITSVLLVTGVILLGGFVYLWKRRHRKQG-------KTDGSSKLDYND 481
                 KK++ +++ S++ V  ++L+    YL KRR R Q         +   S  D  D
Sbjct: 433 GNGASGKKRLVLILISLIAVVMLLLISFHCYLRKRRQRTQSNRLRKAPSSFAPSSFDLED 492

Query: 482 RGNREE------EMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKR 535
               EE        ELP+F+   IA AT NF+ +NKLG GGFGPVYKGVL  G EIA KR
Sbjct: 493 SFILEELEDKSRSRELPLFELSTIATATNNFAFQNKLGAGGFGPVYKGVLQNGMEIAVKR 552

Query: 536 LSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
           LSKSSGQGMEEF+NEV LI+KLQHRNLV+++GCC + +E+ML+YEYLPNKSL+ FIF
Sbjct: 553 LSKSSGQGMEEFKNEVKLISKLQHRNLVRILGCCVEFEEKMLVYEYLPNKSLDYFIF 609

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana GN=SD17 PE=1 SV=1

 Score =  460 bits (1183), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 255/606 (42%), Positives = 376/606 (62%), Gaps = 40/606 (6%)

Query: 26  SIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALN 85
           +I   +T++S ++ FELGFF+P  S   YLGIWYK I   T +WVANRD PLS  +G L 
Sbjct: 37  TISSNKTIISPSQIFELGFFNPASSSRWYLGIWYKIIPIRTYVWVANRDNPLSSSNGTLK 96

Query: 86  ISSQGNATLVLLNSTNGIVWSSNASR-TARNPVAV-LLESGNLVVKDGKDIDPDNFLWQS 143
           IS  GN  LV+ + ++  VWS+N +    R+PVA  LL++GN +++D  +      LWQS
Sbjct: 97  IS--GN-NLVIFDQSDRPVWSTNITGGDVRSPVAAELLDNGNFLLRDSNN----RLLWQS 149

Query: 144 FDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTI 203
           FD+P+  L+A MKLG +  TG NR + SWK+ DDP+  ++   ++ S  P+       +I
Sbjct: 150 FDFPTDTLLAEMKLGWDQKTGFNRILRSWKTTDDPSSGEFSTKLETSEFPEFYICSKESI 209

Query: 204 RYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVFYRFNLIKSSVPSMMVMNPLGDPQR 263
            YR+G WNG+ ++ +P         + + +++ EV Y + + K+++ S + +N  G  QR
Sbjct: 210 LYRSGPWNGMRFSSVPGTIQVDYMVYNFTASKEEVTYSYRINKTNLYSRLYLNSAGLLQR 269

Query: 264 LTWMEQTQKWAP--FVPFSGLILDQCDNYALCGAYAVCNMNSNSAKCECLEGFVPKSPSE 321
           LTW E TQ W    + P      D CDNY +CG +  C+ NS    C C++GF P +   
Sbjct: 270 LTWFETTQSWKQLWYSP-----KDLCDNYKVCGNFGYCDSNS-LPNCYCIKGFKPVNEQA 323

Query: 322 WDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTRFSLVDNKISLLECKELCSKNCSCT 381
           WDL D S GC+R+T+L C+  DGF + + +KLPDT  ++VD +I L  CKE C ++C+CT
Sbjct: 324 WDLRDGSAGCMRKTRLSCDGRDGFTRLKRMKLPDTTATIVDREIGLKVCKERCLEDCNCT 383

Query: 382 AYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRMAASELDDIERKKPKKKKKVAIV 441
           A+ANAD+R GGSGC++W  +++DM+  ++ GQDL+VR+AA+EL+D +R K +K    +I 
Sbjct: 384 AFANADIRNGGSGCVIWTREILDMRNYAKGGQDLYVRLAAAELED-KRIKNEKIIGSSIG 442

Query: 442 ITSVLLVTGVILLGGFVYLWKRRHRK----------QGKTDGS-------SKLDYNDRGN 484
           ++ +LL++ VI      + WKR+ ++          Q ++  S       S+  Y  +  
Sbjct: 443 VSILLLLSFVIF-----HFWKRKQKRSITIQTPNVDQVRSQDSLINDVVVSRRGYTSKEK 497

Query: 485 REEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGM 544
           + E +ELP+ +  A+A AT NFS+ NKLG+GGFG VYKG L++G+EIA KRLSK S QG 
Sbjct: 498 KSEYLELPLLELEALATATNNFSNDNKLGQGGFGIVYKGRLLDGKEIAVKRLSKMSSQGT 557

Query: 545 EEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWSF 604
           +EF NEV LIAKLQH NLV+L+GCC  + E+MLIYEYL N SL+  +F    + +  W  
Sbjct: 558 DEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEYLENLSLDSHLFDQTRSSNLNWQK 617

Query: 605 FFSFEN 610
            F   N
Sbjct: 618 RFDIIN 623

Involved in the regulation of cellular expansion and differentiation. Mediates subcellular relocalization of PUB9 from nucleus to plasma membrane in a protein-phosphorylation-dependent manner. May be involved in the abscisic acid-mediated signaling pathway, at least during germination.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81833|SD11_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 OS=Arabidopsis thaliana GN=SD11 PE=1 SV=1

 Score =  441 bits (1135), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 255/580 (43%), Positives = 364/580 (62%), Gaps = 41/580 (7%)

Query: 27  IRDGETLVSANESFELGFFS---PGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGA 83
           ++DG+TL S ++ F+LGFFS     + + R+LG+WY  +    V+WVANR+ PL   SG 
Sbjct: 34  LKDGDTLSSPDQVFQLGFFSLDQEEQPQHRFLGLWY--MEPFAVVWVANRNNPLYGTSGF 91

Query: 84  LNISSQGNATLVLLNSTNGIVWSSNASRTA-----RNPVAVLLESGNLVVKDGKDIDPDN 138
           LN+SS G+  L L +  +  +WSS++S T       NP+  +  SGNL+  DG++     
Sbjct: 92  LNLSSLGD--LQLFDGEHKALWSSSSSSTKASKTANNPLLKISCSGNLISSDGEEA---- 145

Query: 139 FLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFR 198
            LWQSFDYP + ++AGMKLG N  T +   +SSWK+  DP+  D+   +D  G+PQ + R
Sbjct: 146 VLWQSFDYPMNTILAGMKLGKNFKTQMEWSLSSWKTLKDPSPGDFTLSLDTRGLPQLILR 205

Query: 199 KG--STIRYRAGSWNGLHWTGMPQL-QPNPVYTFEYVSNENEVFYRFNLIKSSVPSMMVM 255
           K   S+  YR GSWNGL +TG P + + N ++ +++ S+  EV Y +   +  + S +V+
Sbjct: 206 KNGDSSYSYRLGSWNGLSFTGAPAMGRENSLFDYKFTSSAQEVNYSWT-PRHRIVSRLVL 264

Query: 256 NPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYAVCNMNS-NSAKCECLEGF 314
           N  G   R    +Q Q    ++  +    D+CD Y++CGAYAVC +NS N+  C CL+GF
Sbjct: 265 NNTGKLHRFIQSKQNQ----WILANTAPEDECDYYSICGAYAVCGINSKNTPSCSCLQGF 320

Query: 315 VPKSPSEWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTRFSLVD--NKISLLECKE 372
            PKS  +W++   + GCV     +CE  D F+K   +KLPDT +S  D  N+++L +CK 
Sbjct: 321 KPKSGRKWNISRGAYGCVHEIPTNCEKKDAFVKFPGLKLPDTSWSWYDAKNEMTLEDCKI 380

Query: 373 LCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRMAASELDDIERKKP 432
            CS NCSCTAYAN D+R GG GCLLWF DL+DM+E S  GQD+++RM  ++++     K 
Sbjct: 381 KCSSNCSCTAYANTDIREGGKGCLLWFGDLVDMREYSSFGQDVYIRMGFAKIE----FKG 436

Query: 433 KKKKKVAIVITSVLLVTGVILLGGFVYLWKRRHRKQGKTDGSSKLDYNDRGNREEEMELP 492
           ++   + +     + V  V++   F     +R+R +             +G  EE+++LP
Sbjct: 437 REVVGMVVGSVVAIAVVLVVVFACFRKKIMKRYRGENFR----------KGIEEEDLDLP 486

Query: 493 IFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVL 552
           IFD   I+ AT++FS  N LG GGFGPVYKG L +GQEIA KRLS +SGQG+EEF+NEV 
Sbjct: 487 IFDRKTISIATDDFSYVNFLGRGGFGPVYKGKLEDGQEIAVKRLSANSGQGVEEFKNEVK 546

Query: 553 LIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
           LIAKLQHRNLV+L+GCC Q +E MLIYEY+PNKSL+ FIF
Sbjct: 547 LIAKLQHRNLVRLLGCCIQGEECMLIYEYMPNKSLDFFIF 586

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=1 SV=1

 Score =  431 bits (1109), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 256/652 (39%), Positives = 367/652 (56%), Gaps = 78/652 (11%)

Query: 2   LIIYCFLFYTIRTATARDTLNLGQSIRDG---ETLVSANESFELGFFSPGKSKSRYLGIW 58
           L +Y FL+    ++ A +T+  G+S+RDG   + LVS  ++FELGFFSPG S  R+LGIW
Sbjct: 13  LFLYFFLY---ESSMAANTIRRGESLRDGINHKPLVSPQKTFELGFFSPGSSTHRFLGIW 69

Query: 59  YKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSN---ASRTARN 115
           Y  I +  V+WVANR  P+SD+SG L IS+ GN  LVLL+  N  VWSSN   ++    N
Sbjct: 70  YGNIEDKAVVWVANRATPISDQSGVLMISNDGN--LVLLDGKNITVWSSNIESSTTNNNN 127

Query: 116 PVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSA 175
            V  + ++GN V+ +    D D  +W+SF++P+   +  M++ VN  TG N    SW+S 
Sbjct: 128 RVVSIHDTGNFVLSE---TDTDRPIWESFNHPTDTFLPQMRVRVNPQTGDNHAFVSWRSE 184

Query: 176 DDPAQDDYVYGIDPSGVPQAVFRKGSTIR-YRAGSWNGLHWTGMPQLQ--PNPVYTFEYV 232
            DP+  +Y  G+DPSG P+ V  +G+  R +R+G WN   +TG+P +    N +Y F+  
Sbjct: 185 TDPSPGNYSLGVDPSGAPEIVLWEGNKTRKWRSGQWNSAIFTGIPNMSLLTNYLYGFKLS 244

Query: 233 SNENEVFYRFNLIKSSVPSMMVMNPL---GDPQRLTWMEQTQKWAPFVPFSGLILDQCDN 289
           S  +E    +     S PS+++   +   G  + L W E  +KW  F         +CD 
Sbjct: 245 SPPDETGSVYFTYVPSDPSVLLRFKVLYNGTEEELRWNETLKKWTKFQSEPD---SECDQ 301

Query: 290 YALCGAYAVCNMNSNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHG-----DG 344
           Y  CG + +C+M  ++  C C+ G+   S   W     S GC RRT L CE       D 
Sbjct: 302 YNRCGKFGICDMKGSNGICSCIHGYEQVSVGNW-----SRGCRRRTPLKCERNISVGEDE 356

Query: 345 FLKRESVKLPD---TRFSLVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHD 401
           FL  +SVKLPD      +LVD +    +C+E C +NCSC AY+      GG GC++W  D
Sbjct: 357 FLTLKSVKLPDFEIPEHNLVDPE----DCRERCLRNCSCNAYSLV----GGIGCMIWNQD 408

Query: 402 LIDMKELSESGQDLFVRMAASELDDIERKKPKKKKKVAIVITSVLLVTGVILLGGFVYLW 461
           L+D+++    G  L +R+A SE+ +       +K K+A+++    ++ GVIL+G F  L 
Sbjct: 409 LVDLQQFEAGGSSLHIRLADSEVGE------NRKTKIAVIVA---VLVGVILIGIFALLL 459

Query: 462 KRRHRKQ-------GKTDGSS------------------KLDYNDRGNREEEMELPIFDW 496
            R  RK+       GK   +S                   +D    G      ELP+F  
Sbjct: 460 WRFKRKKDVSGAYCGKNTDTSVVVADLTKSKETTSAFSGSVDIMIEGKAVNTSELPVFSL 519

Query: 497 MAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAK 556
            AIA AT +F  +N+LG GGFGPVYKGVL +G+EIA KRLS  SGQG++EF+NE++LIAK
Sbjct: 520 NAIAIATNDFCKENELGRGGFGPVYKGVLEDGREIAVKRLSGKSGQGVDEFKNEIILIAK 579

Query: 557 LQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFFFSF 608
           LQHRNLV+L+GCC + +E+ML+YEY+PNKSL+ F+F         W   FS 
Sbjct: 580 LQHRNLVRLLGCCFEGEEKMLVYEYMPNKSLDFFLFDETKQALIDWKLRFSI 631

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P0DH86|SRK_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=SRK PE=2 SV=1

 Score =  430 bits (1105), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 251/606 (41%), Positives = 363/606 (59%), Gaps = 44/606 (7%)

Query: 8   LFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTV 67
           L  ++ T +A ++L    +I   +T+VS    FELGFF      S YLGIWYKKI   T 
Sbjct: 28  LSISVNTLSATESL----TISSNKTIVSPGGVFELGFFRI-LGDSWYLGIWYKKISQRTY 82

Query: 68  IWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNP-VAVLLESGNL 126
           +WVANRD PLS+  G L IS   NA LV+L++++  VWS+N +   R+  VA LL++GN 
Sbjct: 83  VWVANRDTPLSNPIGILKIS---NANLVILDNSDTHVWSTNLTGAVRSSVVAELLDNGNF 139

Query: 127 VVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQDDYVYG 186
           V++  K  + D FLWQSFD+P+  L+  MKLG +   GLNRF++SWKS+ DP+   +++ 
Sbjct: 140 VLRGSKINESDEFLWQSFDFPTDTLLPQMKLGRDHKRGLNRFVTSWKSSFDPSSGSFMFK 199

Query: 187 IDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVFYRFNLIK 246
           ++  G+P+          YR+G W+GL ++G+ ++Q      + +  N  EV Y F +  
Sbjct: 200 LETLGLPEFFGFTSFLEVYRSGPWDGLRFSGILEMQQWDDIIYNFTENREEVAYTFRVTD 259

Query: 247 SSVPSMMVMNPLGDPQRLTWMEQTQKWAP--FVPFSGLILDQCDNYALCGAYAVCNMNSN 304
            +  S + +N +G  +   W    Q+W    F+P      D CD Y +CG YA C+M S 
Sbjct: 260 HNSYSRLTINTVGRLEGFMWEPTQQEWNMFWFMP-----KDTCDLYGICGPYAYCDM-ST 313

Query: 305 SAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTRFSLVDNK 364
           S  C C++GF P SP +W   D +  C R+TQL C   D F +  ++K+P T  ++VD +
Sbjct: 314 SPTCNCIKGFQPLSPQDWASGDVTGRCRRKTQLTCGE-DRFFRLMNMKIPATTAAIVDKR 372

Query: 365 ISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRMAASEL 424
           I L EC+E C  +C+CTAYAN+D+R GGSGC++W  +  D++  +  GQDLFVR+AA+E 
Sbjct: 373 IGLKECEEKCKTHCNCTAYANSDIRNGGSGCIIWIGEFRDIRNYAADGQDLFVRLAAAEF 432

Query: 425 DDIERKKPKKKKKVAIVITSVLLVTGVILLGGFVYLWKRRHRKQGKTDGSSKLDYNDR-- 482
              ER+  + K    I+  S++LV   I+       WK++ ++   T  ++ + Y DR  
Sbjct: 433 G--ERRTIRGKIIGLIIGISLMLVLSFIIY----CFWKKKQKRARAT--AAPIGYRDRIQ 484

Query: 483 ------------GNR----EEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLI 526
                       G R    EE++ELP+ ++  +  ATENFSD N LG GGFG VYKG L+
Sbjct: 485 ELIITNGVVMSSGRRLLGEEEDLELPLTEFETVVMATENFSDSNILGRGGFGIVYKGRLL 544

Query: 527 EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKS 586
           +GQEIA KRLS+ S QG  EF+NEV LIA+LQH NLV+L+ CC   DE++LIYEYL N S
Sbjct: 545 DGQEIAVKRLSEMSSQGTNEFKNEVRLIARLQHINLVRLLSCCIYADEKILIYEYLENGS 604

Query: 587 LNDFIF 592
           L+  +F
Sbjct: 605 LDSHLF 610

Female specificity determinant of self-incompatibility.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	617
224122978	831	predicted protein [Populus trichocarpa]	0.944	0.701	0.588	0.0
224122958	812	predicted protein [Populus trichocarpa]	0.949	0.721	0.553	0.0
147799241	818	hypothetical protein VITISV_027305 [Viti	0.938	0.707	0.547	0.0
359493740	2422	PREDICTED: uncharacterized protein LOC10	0.940	0.239	0.541	0.0
224115106	755	predicted protein [Populus trichocarpa]	0.884	0.723	0.581	0.0
224122858	831	predicted protein [Populus trichocarpa]	0.948	0.703	0.522	0.0
255569631	868	S-locus-specific glycoprotein S13 precur	0.941	0.669	0.535	0.0
359493715	1603	PREDICTED: uncharacterized protein LOC10	0.931	0.358	0.541	0.0
359493730	770	PREDICTED: G-type lectin S-receptor-like	0.891	0.714	0.516	0.0
359493727	1767	PREDICTED: uncharacterized protein LOC10	0.918	0.320	0.528	0.0

>gi|224122978|ref|XP_002330411.1| predicted protein [Populus trichocarpa] gi|222871796|gb|EEF08927.1| predicted protein [Populus trichocarpa]

 Score =  710 bits (1832), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/593 (58%), Positives = 447/593 (75%), Gaps = 10/593 (1%)

Query: 1   MLIIYCFLFYT-IRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWY 59
           +L ++ FL  + IR +T  DTL  GQSIRDG+ LVSA+ SFELGFFSPG SK RYLGIWY
Sbjct: 10  ILFVHTFLLISAIRAST--DTLTPGQSIRDGDLLVSADGSFELGFFSPGISKGRYLGIWY 67

Query: 60  KKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAV 119
           +KI  GTV+WVANR+ PL+D SGAL ++ QG   L+LLNS+   +WSSNASRTA+NPV  
Sbjct: 68  QKISAGTVVWVANRETPLNDSSGALIVTDQG--ILILLNSSKDAIWSSNASRTAQNPVMK 125

Query: 120 LLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPA 179
           LL+SGNLVVKD  D + +NFLWQSFDYP   L+ GMK G N+VTGL+R++SSWKS++DPA
Sbjct: 126 LLDSGNLVVKDIND-NSENFLWQSFDYPGDTLLPGMKWGRNMVTGLDRYLSSWKSSNDPA 184

Query: 180 QDDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVF 239
           Q ++ + IDP G  Q +  +G  I YR G+WNG  WTG PQL+PN +YT+ ++S   E++
Sbjct: 185 QGEFTFRIDPRGNTQMLLMRGPKILYRTGTWNGYRWTGTPQLEPNMLYTYGFISTATEMY 244

Query: 240 YRFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYAVC 299
           Y+F+LI SSV S +VMN  G  QR TW+ +T  WA F   S ++LDQCD+YALCGAY  C
Sbjct: 245 YKFDLINSSVASRIVMNSSGAAQRFTWITRTNSWARF---SAVLLDQCDDYALCGAYGSC 301

Query: 300 NMNSNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTRFS 359
           N+N     C CLEGF+PKSP +W + + SDGCVRRT+LDC+ GD FL+   VKLPD   S
Sbjct: 302 NVNKQPV-CACLEGFIPKSPKDWSIQEWSDGCVRRTKLDCDKGDRFLQHGGVKLPDMIKS 360

Query: 360 LVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRM 419
            VD    L ECK+LC KNCSC AYAN+D+RGGGSGCLLWF +LID +EL+  GQDL++R+
Sbjct: 361 WVDTSKGLKECKDLCLKNCSCVAYANSDIRGGGSGCLLWFDELIDTRELTTGGQDLYIRI 420

Query: 420 AASELDDIERKKPKKKKKVAIVITSVLLVTGVILLGGFVYLWKRRHRKQGKTDGSSKLDY 479
           AASEL +IE+ +   KK++ I++ +++ + GV++L   +Y  +++ +KQ     S   +Y
Sbjct: 421 AASELYNIEKNRSSDKKQLGIIVGTIITIVGVLVLAFILYARRKKLKKQANMKTSHLQNY 480

Query: 480 NDRGNREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKS 539
            D   R+E+MELP FD   IANAT+NFS +NKLGEGGFG VYKG LIEGQE+A KRLSK+
Sbjct: 481 EDEDQRKEDMELPTFDLSTIANATDNFSSRNKLGEGGFGSVYKGTLIEGQEVAVKRLSKN 540

Query: 540 SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
           SGQG+ EF+NEV+LIAKLQHRNLVKL+GCC + DER+LIYEY+PNKSL+ FIF
Sbjct: 541 SGQGLTEFKNEVILIAKLQHRNLVKLLGCCIEGDERILIYEYMPNKSLDYFIF 593

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122958|ref|XP_002330406.1| predicted protein [Populus trichocarpa] gi|222871791|gb|EEF08922.1| predicted protein [Populus trichocarpa]

 Score =  672 bits (1733), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/603 (55%), Positives = 423/603 (70%), Gaps = 17/603 (2%)

Query: 1   MLIIYCFLFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYK 60
           ++ +Y   F  ++ ++A D +N  QS+RDGETLVS   SFELGFF+P  S SRYLG+WYK
Sbjct: 6   VIFVYSLFFSILKISSALDAMNTTQSLRDGETLVSTGGSFELGFFTPAGSTSRYLGLWYK 65

Query: 61  KIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVL 120
           K    TV+WVANR  P+S++ G LN++SQG   LVLLN TN IVWSSN S T +NPVA L
Sbjct: 66  K-SPQTVVWVANRGIPISNKFGTLNVTSQG--ILVLLNGTNNIVWSSNTSTTVQNPVAQL 122

Query: 121 LESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQ 180
           L+SGNLVV+DG D   DNFLWQSFDYP   L+ GMKLG NLVTGLN F+SSWK  ++PA 
Sbjct: 123 LDSGNLVVRDGNDNKADNFLWQSFDYPCDTLLPGMKLGSNLVTGLNSFLSSWKGKENPAP 182

Query: 181 DDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVFY 240
             +  GID  G PQ + RK + I YR GSWNG ++TG P+L+P+P+YTFE+V N NEV++
Sbjct: 183 GQFTLGIDVQGYPQLILRKETRIMYRVGSWNGQYFTGFPELKPDPIYTFEFVFNRNEVYF 242

Query: 241 RFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYAVCN 300
           +F L  SSV S + + P G  Q  TW  QT  W     F+  ++D+C+NYALCGA A C+
Sbjct: 243 KFELQNSSVFSRLTVTPSGLVQLFTWSHQTNDW---YVFATAVVDRCENYALCGANARCD 299

Query: 301 MNSNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTRFSL 360
            NS S  C+CL+GF+ KSP+EW+  + + GC+RRT LDC   DGF     VKLPDT  S 
Sbjct: 300 SNS-SPVCDCLDGFIHKSPTEWNSQNWTGGCIRRTPLDCTDKDGFQSYTGVKLPDTSSSW 358

Query: 361 VDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRMA 420
            D+  SL+EC+ LC +NCSC AYAN D RG GSGCL WF DLID + L+E GQD+++R+A
Sbjct: 359 YDDSFSLVECEGLCIQNCSCFAYANLDFRGRGSGCLRWFGDLIDTRRLAEGGQDIYIRLA 418

Query: 421 ASELDDIERKKPKKKKKVAIVITSVLLVTGVILLGGFVYLWKRRHRKQGKTDGSSKLDYN 480
           AS+      KK KKK    ++  +V+L + +++LG    + +R+HRK G        ++ 
Sbjct: 419 ASQSGVTGEKKRKKKTHAGVIGGAVILGSSILILGIVFCIRRRKHRKNG--------NFE 470

Query: 481 DRGNREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSS 540
           DR  +EEEMELP+ D   I +AT+NFS   KLGEGGFG VYKG LIEGQEIA KRLSKSS
Sbjct: 471 DR--KEEEMELPMLDLTTIEHATDNFSSSKKLGEGGFGAVYKGELIEGQEIAVKRLSKSS 528

Query: 541 GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHF 600
           GQG+ EF+NEVLLIAKLQHRNLVKL+GCC   DE+MLIYEY+PN+SL+ FIF     +  
Sbjct: 529 GQGLNEFKNEVLLIAKLQHRNLVKLLGCCIHEDEKMLIYEYMPNRSLDSFIFDPTRRKFL 588

Query: 601 FWS 603
            WS
Sbjct: 589 DWS 591

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147799241|emb|CAN77004.1| hypothetical protein VITISV_027305 [Vitis vinifera]

 Score =  666 bits (1718), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/594 (54%), Positives = 440/594 (74%), Gaps = 15/594 (2%)

Query: 1   MLIIYCFLFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYK 60
           ++ ++ ++   +R +TA D++   Q I+DGET++SA  +FELGF   G SK++YLGIWYK
Sbjct: 7   LVFLFSYVISILRISTAVDSITANQHIKDGETIISAGGNFELGFVHLGTSKNQYLGIWYK 66

Query: 61  KIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVL 120
           K+   TV+WVANR+ P++D SG L ++ QG  +LV+LN +NG++WSSN+SR+ARNP A L
Sbjct: 67  KVTPRTVVWVANRELPVTDSSGXLKVTDQG--SLVILNGSNGLIWSSNSSRSARNPTAQL 124

Query: 121 LESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQ 180
           L+SGNLV+K G D DPDNFLWQSFDYP   L+ GMK G N VTGL+R++SSWKS DDP++
Sbjct: 125 LDSGNLVIKSGNDSDPDNFLWQSFDYPGDTLLPGMKHGRNTVTGLDRYLSSWKSNDDPSK 184

Query: 181 DDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVFY 240
            D+ YG+DPSG PQ   R GST+ +R+G WNG+ + G P+L+PNPV+ + +V NE E+++
Sbjct: 185 GDFTYGLDPSGCPQLFLRSGSTVIFRSGPWNGIRFNGFPELRPNPVFNYSFVFNEKEMYF 244

Query: 241 RFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYAVCN 300
            + L+ SSV S +V+NP G+ QRL W+ +T+ W     +S    D CD+YALCGAY+ CN
Sbjct: 245 TYKLVNSSVLSRLVLNPNGNVQRLIWIGRTKSWN---VYSTAYKDDCDSYALCGAYSTCN 301

Query: 301 MNSNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTRFSL 360
           ++  S +C C++GFVPK P +WD +D S+GCVR+T LDC+ GDGF K   VKLPDTR S 
Sbjct: 302 IH-RSPRCGCMKGFVPKFPYQWDTMDWSNGCVRKTSLDCQKGDGFAKYSGVKLPDTRNSW 360

Query: 361 VDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRMA 420
            +  ++L EC  LC +NCSC+AY N+D++GGGSGCLLWF DLID+KE +E+GQD ++RMA
Sbjct: 361 FNESMNLKECASLCFRNCSCSAYTNSDIKGGGSGCLLWFGDLIDIKEFTENGQDFYIRMA 420

Query: 421 ASELDDIERKKPKKKKKVAIVITSVLLVTGVILLGGFV--YLWKRRHRKQGKTDGSSKLD 478
           ASELD I      K  K   VI S + + G+ILL   V  YL K+R +++G T+ ++  +
Sbjct: 421 ASELDAIS-----KVTKRRWVIVSTVSIAGMILLSLVVTLYLLKKRLKRKGTTELNN--E 473

Query: 479 YNDRGNREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSK 538
             +   R+E++ELP+F    I NAT NFS  NKLGEGGFGPVYKG+L +G+EIA KRLSK
Sbjct: 474 GAETNERQEDLELPLFXLDTILNATHNFSRNNKLGEGGFGPVYKGMLQDGKEIAVKRLSK 533

Query: 539 SSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
            S QG++EF+NEV+ I+KLQHRNLVKL+GCC   +E+MLIYEY+PNKSLN FIF
Sbjct: 534 ESNQGLDEFKNEVIYISKLQHRNLVKLLGCCIHGEEKMLIYEYMPNKSLNFFIF 587

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493740|ref|XP_002280379.2| PREDICTED: uncharacterized protein LOC100262430 [Vitis vinifera]

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/593 (54%), Positives = 424/593 (71%), Gaps = 13/593 (2%)

Query: 15   ATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRD 74
            + A DT+ + Q IRDGET++SA+ SFELGFFSPG SK+RYLGIWYKK+  GTV+WV NR+
Sbjct: 1641 SIAVDTITVNQPIRDGETIISADGSFELGFFSPGNSKNRYLGIWYKKMATGTVVWVGNRE 1700

Query: 75   APLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDI 134
             PL+D SG L ++ QG   LV++N TNGI+W++ +SR+A++P A LLESGNLV+++G D 
Sbjct: 1701 NPLTDSSGVLKVTQQG--ILVVVNGTNGILWNTTSSRSAQDPKAQLLESGNLVMRNGNDG 1758

Query: 135  DPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQ 194
            DP+NFLWQSFDYP   L+ GMKLG N VTGL+R++SSWKSADDP++ ++ YGID SG PQ
Sbjct: 1759 DPENFLWQSFDYPCDTLLPGMKLGRNRVTGLDRYLSSWKSADDPSKGNFTYGIDLSGFPQ 1818

Query: 195  AVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVFYRFNLIKSSVPSMMV 254
                 G  +++R G WNG+ ++G+PQL  N VYTF +VSNE E++  ++L+ SSV   +V
Sbjct: 1819 LFLWNGLAVKFRGGPWNGVRYSGIPQLTNNSVYTFVFVSNEKEIYIIYSLVNSSVIMRLV 1878

Query: 255  MNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYAVCNMNSNSAKCECLEGF 314
            + P G  +R TW ++   W     +S    D CDNYA+CGAY +C ++  S KCEC++GF
Sbjct: 1879 LTPDGYSRRFTWTDKKYDWT---LYSTAQRDDCDNYAICGAYGICKID-QSPKCECMKGF 1934

Query: 315  VPKSPSEWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTRFSLVDNKISLLECKELC 374
             PK  S WD+ D S GCVR   LDC+ GDGF+K   VKLPDT+ S  +  ++L EC  LC
Sbjct: 1935 RPKFQSNWDMADWSKGCVRSNPLDCQKGDGFVKYSGVKLPDTQNSWFNESMNLKECAFLC 1994

Query: 375  SKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRMAASELDDIERKKPKK 434
            S+NCSCTAYAN+D+RGGGSGCLLWF DLID+++ +++GQ+ +VRMAASELD         
Sbjct: 1995 SRNCSCTAYANSDIRGGGSGCLLWFGDLIDIRDFTQNGQEFYVRMAASELDTFSSLNSSS 2054

Query: 435  KKKVAIVITSVLLVTGVILLGGFVYLW-----KRRHRKQGKTDGSSKLDYNDRGNREEEM 489
            +KK   VI   + +TG++LL   + L+     KR+ +++G  +  S+ D  + G +  E+
Sbjct: 2055 EKKKNQVIVISISITGIVLLSLVLTLYVLKKRKRQLKRRGYMEHGSEGDETNEGRKHPEL 2114

Query: 490  ELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFEN 549
            +L  FD   + NAT NFS  NKLGEGGFG VYKG+L EGQEIA K +SK+S QG+EEF+N
Sbjct: 2115 QL--FDLDTLLNATTNFSSDNKLGEGGFGLVYKGILQEGQEIAVKMMSKTSRQGLEEFKN 2172

Query: 550  EVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFW 602
            EV  IAKLQHRNLVKL GCC    ERMLIYEYLPNKSL+ FIFG + +    W
Sbjct: 2173 EVESIAKLQHRNLVKLFGCCIHGRERMLIYEYLPNKSLDLFIFGQMQSVVLDW 2225

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115106|ref|XP_002316941.1| predicted protein [Populus trichocarpa] gi|222860006|gb|EEE97553.1| predicted protein [Populus trichocarpa]

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/555 (58%), Positives = 405/555 (72%), Gaps = 9/555 (1%)

Query: 39  SFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLN 98
           SF LGFFSPG S +RYLGIWY KI  GTV+WVANR+ PL +R G LN++ QG   LVL N
Sbjct: 3   SFGLGFFSPGSSSNRYLGIWYNKITPGTVVWVANREQPLVNRLGVLNVTGQG--VLVLFN 60

Query: 99  STNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLG 158
           STN  VWSSN SRTA+NPV  LL+SGNL VKDG D +PDNFLWQSFDYPS  L+ GMK G
Sbjct: 61  STNYAVWSSNVSRTAQNPVVQLLDSGNLAVKDGNDNNPDNFLWQSFDYPSETLLPGMKWG 120

Query: 159 VNLVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGM 218
            NLVTGL+R+ISSWKSADDPA+ D+ + +DP G  Q +  +G TI YR G WNG  W G+
Sbjct: 121 KNLVTGLDRYISSWKSADDPARGDFTFRLDPRGYNQMLLMRGLTILYRTGIWNGFRWGGV 180

Query: 219 PQLQPNPVYTFEYVSNENEVFYRFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVP 278
           P+   N VY  ++VS   E +Y F+L+ SSVPS +V+NP   PQRLTW+ QT  W     
Sbjct: 181 PETISNTVYGEQFVSTATESYYTFDLLNSSVPSRLVINPSSIPQRLTWITQTNLWG---S 237

Query: 279 FSGLILDQCDNYALCGAYAVCNMNSNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLD 338
           +S + +DQCD Y LCGA  +C+ NSN A C CLE F+P++P  W+  D S GCVRRTQL 
Sbjct: 238 YSVVQIDQCDTYTLCGANGICS-NSNGAVCSCLESFIPRTPESWNKQDWSGGCVRRTQLG 296

Query: 339 CEHGDGFLKRESVKLPDTRFSLVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLW 398
           C++GDGFL+   VKLPD   S V+  +SL+EC+ +C  NCSC AY N+D+R G SGC LW
Sbjct: 297 CKNGDGFLQITGVKLPDMSDSWVNTSMSLVECRNMCLSNCSCVAYGNSDIRRGASGCYLW 356

Query: 399 FHDLIDMKELSESGQDLFVRMAASELDDIERKKPKKKKKVAIVITSVLLVTGVILLGGFV 458
           F DL D K L   GQDL++RMAASEL   E+K   K+K+  I+I +++    +++LG  +
Sbjct: 357 FDDLWDTKHLPLGGQDLYIRMAASELSIYEKKSSSKRKRRRIIIGTLISAVVLLVLGFML 416

Query: 459 YLWKRRHRKQGKTDGSSKLD-YNDRGNREEEMELPIFDWMAIANATENFSDKNKLGEGGF 517
           Y+ +RR  +QGK   S ++D   D   R+++MELP FD++ I NAT+ FS  NKLGEGGF
Sbjct: 417 YMRRRRKTRQGKK--SIRIDNLKDESGRKDDMELPAFDFITIKNATDYFSYNNKLGEGGF 474

Query: 518 GPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML 577
           G VYKG L +GQEIA KRLSK+SGQG++EF+NEV+LIAKLQHRNLVKL+GCC + DERML
Sbjct: 475 GSVYKGTLTDGQEIAVKRLSKNSGQGLKEFKNEVILIAKLQHRNLVKLLGCCIEGDERML 534

Query: 578 IYEYLPNKSLNDFIF 592
           IYEY+PNKSL++FIF
Sbjct: 535 IYEYMPNKSLDNFIF 549

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122858|ref|XP_002330381.1| predicted protein [Populus trichocarpa] gi|222871766|gb|EEF08897.1| predicted protein [Populus trichocarpa]

 Score =  645 bits (1665), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/595 (52%), Positives = 427/595 (71%), Gaps = 10/595 (1%)

Query: 1   MLIIYCFLFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYK 60
           +L +   +F+    +TA +++N  QS+ DG+TLVS+   FELGFFSPG S++RY+GIWYK
Sbjct: 13  ILFLLSIVFFLSIPSTAIESINATQSLEDGDTLVSSEGHFELGFFSPGNSRNRYMGIWYK 72

Query: 61  KIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVL 120
           KI + TV+WVANR+ PL+D SG L     GN  L  +NSTNG +WSSN SR A NPVA L
Sbjct: 73  KISSFTVVWVANRNTPLNDSSGMLKFVDHGN--LAFINSTNGTIWSSNISRAAINPVAQL 130

Query: 121 LESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQ 180
           L++GNLVV+   D DP+NFLWQSFDYP    + GMK G++ VTGLNR+++SWKS  DP+ 
Sbjct: 131 LDTGNLVVRAENDNDPENFLWQSFDYPGDSFLPGMKYGISFVTGLNRYLTSWKSPSDPST 190

Query: 181 DDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVFY 240
             Y   +DP+G+PQ    +GS  ++R+G WNGL ++GM  L+PNP+YTFE+V N+ E++Y
Sbjct: 191 GKYTNKLDPNGLPQYFLSQGSVDQFRSGPWNGLRFSGMINLKPNPIYTFEFVFNQEEIYY 250

Query: 241 RFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYAVCN 300
           ++ +  SSV S MV++P G  QR TW+++TQ W  ++  +   +D CD +ALCGA+ VCN
Sbjct: 251 KYQIANSSVLSRMVLSPDGVLQRFTWIDRTQDWTLYLTAN---MDNCDRFALCGAHGVCN 307

Query: 301 MNSNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTRFSL 360
           +N NS  C+CL+ F PKS  EW   D S GCVR+  LDC +G+GF+K   +K+PDTR S 
Sbjct: 308 IN-NSPACDCLKEFEPKSLEEWTAADWSQGCVRKAPLDCSNGEGFIKYTGIKVPDTRKSW 366

Query: 361 VDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRMA 420
            +  I+L EC+E+C KNCSCTAYAN DVR GGSGC+LWF DLID+++ +E+GQD+++R+A
Sbjct: 367 YNKTINLEECEEVCLKNCSCTAYANLDVRDGGSGCVLWFGDLIDIRQYNENGQDIYIRIA 426

Query: 421 ASELDDIERKKPKKKKKVAIVITSVLLVTGVILLGGFVYLWKRRHRKQGKTDGSSKLD-Y 479
           AS +D   + + KK+ ++ IVI   L+   ++ L  F+   ++  ++Q   +G+   +  
Sbjct: 427 ASVIDKPVKSRGKKRVRI-IVIPVSLVAFSLLALCLFLRFLRKNKQQQLTREGNVVTNPE 485

Query: 480 NDRG--NREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLS 537
            DR   +R E++ELP+FD   + +AT  FS  NKLG+GGFGPVYKG+L +GQEIA KRLS
Sbjct: 486 QDRTKESRNEDLELPLFDLATLTDATNCFSINNKLGQGGFGPVYKGILQDGQEIAVKRLS 545

Query: 538 KSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
           K S QG+ EF NEV+ IAKLQHRNLVKL+GCC + +ERMLIYEY+PNKSL+ FIF
Sbjct: 546 KRSRQGINEFRNEVVCIAKLQHRNLVKLLGCCIELEERMLIYEYMPNKSLDSFIF 600

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255569631|ref|XP_002525781.1| S-locus-specific glycoprotein S13 precursor, putative [Ricinus communis] gi|223534931|gb|EEF36617.1| S-locus-specific glycoprotein S13 precursor, putative [Ricinus communis]

 Score =  643 bits (1658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/600 (53%), Positives = 423/600 (70%), Gaps = 19/600 (3%)

Query: 1   MLIIYC-FLFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWY 59
           +L+I+C +L  +I T+TA DT+N+ QS+ DGETLVSA ESF+LGFFSPG S++RYLGIWY
Sbjct: 49  ILVIFCSYLLLSITTSTAADTINITQSVTDGETLVSAGESFKLGFFSPGNSRTRYLGIWY 108

Query: 60  KKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAV 119
            K+   TV+WVANR+ PL D SG L I+      L LLN     +WSSN +  ARNPVA 
Sbjct: 109 NKVSVMTVVWVANRETPLIDSSGVLKITDH--RILALLNHNGSKIWSSNVTMAARNPVAQ 166

Query: 120 LLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPA 179
           LL+SGNL+VKD  D +P+NFLWQSFDYP + L+ GMKLG N+ TGL+R+ISSWK+  DP+
Sbjct: 167 LLDSGNLIVKDEGDDNPENFLWQSFDYPCNTLLPGMKLGRNIATGLDRYISSWKTPSDPS 226

Query: 180 QDDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVF 239
           + ++ YG+DP+G P+ + R+ S  R+RAG WNG  ++G  QL  NP++ +E+V NE E++
Sbjct: 227 RGNFTYGLDPAGYPEMILRENSIERFRAGPWNGRSYSGTSQLNVNPIFKYEFVINETEIY 286

Query: 240 YRFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYAVC 299
           Y F L+ SSV S MV+N  G  QR  W E+ +KW  +        D CD YALCGA+A C
Sbjct: 287 YDFQLLNSSVLSRMVINENGILQRFIWAERERKWRLYFTIQ---TDDCDQYALCGAFASC 343

Query: 300 NMNSNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTRFS 359
           N+ SNS  C CL GFVPK P EWD  D S GCVR+T L+C   DGF K  + KLP+TR S
Sbjct: 344 NIKSNSY-CSCLNGFVPKFPKEWDQADWSGGCVRKTPLNCS-SDGFQKYLAFKLPETRKS 401

Query: 360 LVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRM 419
             +  ++L +CK +C KNCSCT YAN D+R G SGCLLWF D+ID  EL   GQD+++RM
Sbjct: 402 WFNRSMNLEDCKNMCVKNCSCTVYANLDIREGESGCLLWFSDVIDTTELDGDGQDIYIRM 461

Query: 420 AASEL-----DDIERKKPKKKKKVAIVITSVLLVTGV--ILLGGFVYLWKRRHRKQGKTD 472
           +AS+L     DD + +     KK   +I S LL  G+  + L   +Y+W+++ +K+GK  
Sbjct: 462 SASQLGVAHDDDPKIQSKSNVKKQMRIILSSLLSAGMMSLSLAVILYVWRKKQKKEGKAI 521

Query: 473 GSSKLDYNDRGNREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIA 532
           G  ++  ND+G + EE++LP+FD+  IA AT NFSD NKLGEGGFG    G L +GQEIA
Sbjct: 522 GILEISANDKGEK-EELKLPLFDFGTIACATCNFSDANKLGEGGFG---LGNLKDGQEIA 577

Query: 533 AKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
            +RLSK+S QG++EF NEVL IAKLQHRNLV+L+GCC Q +E++LIYE++PNKSL+ FIF
Sbjct: 578 VRRLSKNSNQGVDEFMNEVLHIAKLQHRNLVRLLGCCIQSEEKLLIYEFMPNKSLDFFIF 637

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493715|ref|XP_002280938.2| PREDICTED: uncharacterized protein LOC100246941 [Vitis vinifera]

 Score =  641 bits (1654), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/593 (54%), Positives = 428/593 (72%), Gaps = 18/593 (3%)

Query: 19   DTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLS 78
            DT+ L Q +RDGE L SA  SFELGFF P  S  RYLG+WYKK+   TV+WVANR+ PL+
Sbjct: 814  DTIALNQLLRDGEILTSAGGSFELGFFRPDNSSRRYLGMWYKKVSIRTVVWVANRETPLA 873

Query: 79   DRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDN 138
            D SG L ++ QG  TL +LN TN I+WSSN+SR+ARNP A +LESGNLV+KDG D +P+N
Sbjct: 874  DSSGVLKVTDQG--TLAVLNGTNTILWSSNSSRSARNPTAQILESGNLVMKDGNDDNPEN 931

Query: 139  FLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFR 198
            FLWQSFDYP + L+ GMKLG N VTGL+R++S+WKSADDP++ D+ Y +DP G PQ + R
Sbjct: 932  FLWQSFDYPCNTLLPGMKLGRNTVTGLDRYLSAWKSADDPSKGDFTYRLDPRGYPQLILR 991

Query: 199  KGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVFYRFNLIKSSVPSMMVMNPL 258
            KGS + +R+G WNG+ ++G P+L PN +YT+E+V NE E+++R+ L+ SSV S +V+NP 
Sbjct: 992  KGSAVTFRSGPWNGVRFSGFPELGPNSIYTYEFVFNEKEMYFRYELVNSSVVSRLVLNPD 1051

Query: 259  GDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYAVCNMNSNSAKCECLEGFVPKS 318
            G  QR+ W+++T  W   + +S    D CD+YALCG Y +CN+N  S KCEC+EGFVPK 
Sbjct: 1052 GSKQRVNWIDRTNGW---ILYSSAPKDDCDSYALCGVYGICNIN-RSPKCECMEGFVPKF 1107

Query: 319  PSEWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTRFSLVDNKISLLECKELCSKNC 378
             ++WD+ D S+GCVR T LDC++G+GF+K   VKLPDTR S  +  + L+EC  +C  NC
Sbjct: 1108 QNDWDMADWSNGCVRSTPLDCQNGEGFVKFSGVKLPDTRNSWFNRSMGLMECAAVCLSNC 1167

Query: 379  SCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRMAASELDDIERKKP--KKKK 436
            SCTAY N D+R GGSGCLLWF DLID++E +E+GQ+++VRMAASEL   +      K KK
Sbjct: 1168 SCTAYTNLDIRDGGSGCLLWFGDLIDIREFNENGQEIYVRMAASELGGSKESGSNLKGKK 1227

Query: 437  KVAIVITSVLLVTGVILLGGFVYLW---KRRHRKQGKTDGSSKLDYNDRGNREEEMELPI 493
            +  I++ SV  V  +IL+  F+ L+    +R RK+G       + YN     +E+ +L +
Sbjct: 1228 RKWIIVGSVSSVV-IILVSLFLTLYLLKTKRQRKKG------TMGYNLEVGHKEDSKLQL 1280

Query: 494  FDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLL 553
            FD+  ++ AT +FS  NKLGEGGFG VYKG+L EGQEIA KRLSK SGQG++E +NEV+ 
Sbjct: 1281 FDFATVSKATNHFSFDNKLGEGGFGLVYKGILQEGQEIAVKRLSKDSGQGLDELKNEVIY 1340

Query: 554  IAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFFF 606
            IAKLQHRNLV+L+GCC   +E+MLIYEY+ NKSL+ FIF    +    W+  F
Sbjct: 1341 IAKLQHRNLVRLLGCCIHGEEKMLIYEYMSNKSLDSFIFDKTQSMELDWNKRF 1393

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493730|ref|XP_003634656.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Vitis vinifera]

 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/602 (51%), Positives = 416/602 (69%), Gaps = 52/602 (8%)

Query: 1   MLIIYCFLFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYK 60
           ++ I+ ++F  +R +TA DT+N+ Q IRDGET+ SA  +F+LGFFSPG SK+RYLGIWYK
Sbjct: 7   VVFIFSYVFSLLRISTAVDTINVNQHIRDGETITSAGGTFQLGFFSPGDSKNRYLGIWYK 66

Query: 61  KIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVL 120
           K+   TV+WVANR++PL+D SG L ++ QG  TLV+++ TNGI+W+SN+SR+A++P A L
Sbjct: 67  KVAPQTVVWVANRESPLTDSSGVLKVTQQG--TLVVVSGTNGILWNSNSSRSAQDPNAQL 124

Query: 121 LESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQ 180
           LESGNLV+++G D DP+NFLWQSFDYP   L+ GMK G N VTGL+R++SSWKSADDP++
Sbjct: 125 LESGNLVMRNGNDSDPENFLWQSFDYPCDTLLPGMKFGWNRVTGLDRYLSSWKSADDPSK 184

Query: 181 DDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVFY 240
            ++ YGID SG PQ   R G T+++RAG WNG+ + G+PQL  N ++TF+YVSNE E+++
Sbjct: 185 GNFTYGIDLSGFPQPFLRNGLTVKFRAGPWNGVRFGGIPQLTNNSLFTFDYVSNEKEIYF 244

Query: 241 RFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYAVCN 300
            + L+ SSV    V+ P G  +R TW ++  +W     +S    D CDNYA+CG Y +C 
Sbjct: 245 IYYLVNSSVFVRRVLTPDGYSRRFTWTDKKNEW---TLYSTAQRDDCDNYAICGVYGICK 301

Query: 301 MNSNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTRFSL 360
           ++  S KCEC++GF PK  S WD+ D S GCVR T LDC+ GDGF+K   VKLPDTR S 
Sbjct: 302 IDE-SPKCECMKGFRPKFQSNWDMADWSKGCVRSTPLDCQKGDGFVKYSGVKLPDTRNSW 360

Query: 361 VDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRMA 420
            D  ++L EC  LC +NCSCTAYAN+D+RGGGSGCLLWF DLID+++ +++GQ+ + RMA
Sbjct: 361 FDESMNLKECASLCLRNCSCTAYANSDIRGGGSGCLLWFDDLIDIRDFTQNGQEFYARMA 420

Query: 421 ASELDDIERKKPKKKKKVAIVITSVLLVTGVILLGGFVYLWKRRHRKQGKTDGSSKLDYN 480
           ASE                                             G  D  SK   N
Sbjct: 421 ASE--------------------------------------------SGYMDHKSKEGEN 436

Query: 481 DRGNREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSS 540
           + G  +E ++LP+F+   + NAT NFS++NKLGEGGFGPVYKG+L EGQEIA K +SK+S
Sbjct: 437 NEG--QEHLDLPLFNLATLLNATNNFSEENKLGEGGFGPVYKGILQEGQEIAVKMMSKTS 494

Query: 541 GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHF 600
            QG++EF+NEV  I KLQHRNLVKL+GCC    ER+LIYEY+PNKSL+ +IF  + +   
Sbjct: 495 RQGLKEFKNEVESITKLQHRNLVKLLGCCIHGRERLLIYEYMPNKSLDLYIFDHMRSRVL 554

Query: 601 FW 602
            W
Sbjct: 555 DW 556

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493727|ref|XP_002280656.2| PREDICTED: uncharacterized protein LOC100243545 [Vitis vinifera]

 Score =  640 bits (1652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/590 (52%), Positives = 418/590 (70%), Gaps = 23/590 (3%)

Query: 3   IIYCFLFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKI 62
           +I+ ++   +R + A DT+ + Q+I DGET+ SA  SFELGFFSPG SK+RYLGIWYKK 
Sbjct: 9   VIFSYVLSLLRISVAVDTIIVNQNITDGETITSAGGSFELGFFSPGNSKNRYLGIWYKKA 68

Query: 63  GNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLE 122
               V+WVANR++P++D SG L ++  G   LVL+N TNGI+W+S +SR+A++P A LLE
Sbjct: 69  SKKPVVWVANRESPITDSSGVLKVTQPG--ILVLVNGTNGILWNSTSSRSAQDPNAQLLE 126

Query: 123 SGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQDD 182
           SGNLV+++G D DP+NFLWQSFDYP   L+ GMKLG N V GL+R++SSWKSADDP++ +
Sbjct: 127 SGNLVMRNGNDRDPENFLWQSFDYPCDTLLPGMKLGRNRVAGLDRYLSSWKSADDPSKGN 186

Query: 183 YVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVFYRF 242
           + Y IDPSG PQ + R G  + +R G WNG+ ++G+PQL  NPVY++EYVSNE E++Y +
Sbjct: 187 FTYWIDPSGFPQLLLRNGLAVAFRPGPWNGIRFSGIPQLTINPVYSYEYVSNEKEIYYIY 246

Query: 243 NLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYAVCNMN 302
           +L+ SSV   +V+ P G  QR  W ++  +W     +S    DQCDNYA+CG   +C ++
Sbjct: 247 SLVNSSVIMRLVLTPDGAAQRSIWTDKKNEWT---LYSTAQRDQCDNYAICGVNGICKID 303

Query: 303 SNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTRFSLVD 362
             S  CEC++GF PK  S WD+ D S+GCVR T LDC+ GDGF+K   VKLPDTR S  +
Sbjct: 304 -QSPNCECMKGFRPKFQSNWDMEDWSNGCVRSTPLDCQKGDGFVKYSGVKLPDTRSSWFN 362

Query: 363 NKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRMAAS 422
             ++L EC  LC  NCSCTAYAN+D+RGGGSGCLLWF DLID+++ +E+GQ+ +VRMAA+
Sbjct: 363 ESMNLKECASLCLSNCSCTAYANSDIRGGGSGCLLWFGDLIDIRDFTENGQEFYVRMAAA 422

Query: 423 ELDDIERKKPKKKKKVAIVITSVLLVTGVILLGGFVYLWKRRHRKQGKTDGSSKLDYNDR 482
           +L+        K+K++   + S+  V  +IL     +     H  +G          N+ 
Sbjct: 423 DLETT------KEKRLGNRLNSI-FVNSLILHSILHFAAYMEHNSKGGE--------NNE 467

Query: 483 GNREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQ 542
           G  +E +ELP+FD   + NAT NFS  NKLGEGGFGPVYKG+L EGQEIA K +SK+S Q
Sbjct: 468 G--QEHLELPLFDLDTLLNATNNFSSDNKLGEGGFGPVYKGILQEGQEIAVKMMSKTSRQ 525

Query: 543 GMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
           G++EF+NEV  IAKLQHRNLVKL+GCC    ER+LIYE++PNKSL+ FIF
Sbjct: 526 GLKEFKNEVESIAKLQHRNLVKLLGCCIHGRERLLIYEHMPNKSLDLFIF 575

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	617
TAIR|locus:2131684	783	AT4G27290 [Arabidopsis thalian	0.679	0.535	0.508	1.4e-157
TAIR|locus:2141181	850	RK3 "receptor kinase 3" [Arabi	0.931	0.676	0.421	2.8e-128
TAIR|locus:2018546	843	RK1 "receptor kinase 1" [Arabi	0.927	0.678	0.413	3.5e-123
TAIR|locus:2131694	815	AT4G27300 [Arabidopsis thalian	0.873	0.661	0.443	2.8e-121
TAIR|locus:2018506	847	RK2 "receptor kinase 2" [Arabi	0.933	0.680	0.408	2e-120
TAIR|locus:2141176	849	B120 [Arabidopsis thaliana (ta	0.909	0.660	0.393	1.7e-107
TAIR|locus:2200908	842	AT1G61610 [Arabidopsis thalian	0.927	0.679	0.374	3.6e-105
TAIR|locus:2200151	830	SD1-13 "S-domain-1 13" [Arabid	0.925	0.687	0.362	1.2e-97
TAIR|locus:2197704	831	AT1G61390 [Arabidopsis thalian	0.918	0.682	0.355	1.4e-94
TAIR|locus:2197734	814	AT1G61370 [Arabidopsis thalian	0.865	0.656	0.358	6.3e-92

TAIR|locus:2131684 AT4G27290 [Arabidopsis thaliana (taxid:3702)]

 Score = 1181 (420.8 bits), Expect = 1.4e-157, Sum P(2) = 1.4e-157
 Identities = 221/435 (50%), Positives = 303/435 (69%)

Query:     1 MLIIYCFLFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYK 60
             +LII   LF TI  A A D L   Q+++DG+T+VS   SFE+GFFSPG S++RYLGIWYK
Sbjct:     9 LLIIS--LFSTILLAQATDILIANQTLKDGDTIVSQGGSFEVGFFSPGGSRNRYLGIWYK 66

Query:    61 KIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTA-----RN 115
             KI   TV+WVANRD+PL D SG L +S  G+  L L N  N I+WSS++S ++     RN
Sbjct:    67 KISLQTVVWVANRDSPLYDLSGTLKVSENGS--LCLFNDRNHIIWSSSSSPSSQKASLRN 124

Query:   116 PVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSA 175
             P+  +L++GNLVV++  D D D ++WQS DYP  + + GMK G+N VTGLNRF++SW++ 
Sbjct:   125 PIVQILDTGNLVVRNSGD-DQD-YIWQSLDYPGDMFLPGMKYGLNFVTGLNRFLTSWRAI 182

Query:   176 DDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNE 235
             DDP+  +Y   +DP+GVPQ   +K S + +R G WNGL +TGMP L+PNP+Y +EYV  E
Sbjct:   183 DDPSTGNYTNKMDPNGVPQFFLKKNSVVVFRTGPWNGLRFTGMPNLKPNPIYRYEYVFTE 242

Query:   236 NEVFYRFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGA 295
              EV+Y + L   SV + M +NP G  QR TW++  Q W  ++     ++D CD Y LCG+
Sbjct:   243 EEVYYTYKLENPSVLTRMQLNPNGALQRYTWVDNLQSWNFYL---SAMMDSCDQYTLCGS 299

Query:   296 YAVCNMNSNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHG-DGFLKRESVKLP 354
             Y  CN+N + A C CL+GFV K+P  W   D S+GCVRR +LDC  G DGFLK   +KLP
Sbjct:   300 YGSCNINESPA-CRCLKGFVAKTPQAWVAGDWSEGCVRRVKLDCGKGEDGFLKISKLKLP 358

Query:   355 DTRFSLVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQD 414
             DTR S  D  + L ECK++C +NC+C+AY+  D+R GG GC+LWF DLID++E +E+GQD
Sbjct:   359 DTRTSWYDKNMDLNECKKVCLRNCTCSAYSPFDIRDGGKGCILWFGDLIDIREYNENGQD 418

Query:   415 LFVRMAASELDDIER 429
             L+VR+A+SE++ ++R
Sbjct:   419 LYVRLASSEIETLQR 433

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:2141181 RK3 "receptor kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1259 (448.2 bits), Expect = 2.8e-128, P = 2.8e-128
 Identities = 258/612 (42%), Positives = 370/612 (60%)

Query:     1 MLIIYCFLFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYK 60
             +LI++     +  T +A ++L    +I    T+VS    FELGFF PG     YLGIWYK
Sbjct:    18 LLILFPAYSISANTLSASESL----TISSNNTIVSPGNVFELGFFKPGLDSRWYLGIWYK 73

Query:    61 KIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASR-TARNP-VA 118
              I   T +WVANRD PLS   G L IS   ++ LV+L+ ++  VWS+N +    R+P VA
Sbjct:    74 AISKRTYVWVANRDTPLSSSIGTLKIS---DSNLVVLDQSDTPVWSTNLTGGDVRSPLVA 130

Query:   119 VLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDP 178
              LL++GN V++D K+  PD  LWQSFD+P+  L+  MKLG +  TG NRFI SWKS DDP
Sbjct:   131 ELLDNGNFVLRDSKNSAPDGVLWQSFDFPTDTLLPEMKLGWDAKTGFNRFIRSWKSPDDP 190

Query:   179 AQDDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEV 238
             +  D+ + ++  G P+       +  YR+G WNG+ ++G+P++QP     F + +++ EV
Sbjct:   191 SSGDFSFKLETEGFPEIFLWNRESRMYRSGPWNGIRFSGVPEMQPFEYMVFNFTTSKEEV 250

Query:   239 FYRFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYAV 298
              Y F + KS V S + ++  G  QR TW+E  Q W  F  ++    DQCD Y  CG Y  
Sbjct:   251 TYSFRITKSDVYSRLSISSSGLLQRFTWIETAQNWNQFW-YAPK--DQCDEYKECGVYGY 307

Query:   299 CNMNSNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTRF 358
             C+ N+ S  C C++GF P++P  W L D SDGCVR+T L C  GDGF++ + +KLPDT  
Sbjct:   308 CDSNT-SPVCNCIKGFKPRNPQVWGLRDGSDGCVRKTLLSCGGGDGFVRLKKMKLPDTTT 366

Query:   359 SLVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVR 418
             + VD  I + EC++ C ++C+CTA+AN D+RG GSGC+ W  +L D++  ++ GQDL+VR
Sbjct:   367 ASVDRGIGVKECEQKCLRDCNCTAFANTDIRGSGSGCVTWTGELFDIRNYAKGGQDLYVR 426

Query:   419 MAASELDDIERXXXXXXXXVAXXXXXXXXXXXXXXXXXFVYLWKRRHRKQGKTDG----- 473
             +AA++L+D +R                             +LWKR+ ++    +      
Sbjct:   427 LAATDLED-KRNRSAKIIG-----SSIGVSVLLLLSFIIFFLWKRKQKRSILIETPIVDH 480

Query:   474 ---SSKLDYND----------RGNREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPV 520
                S  L  N+          R N  +++ELP+ ++  +A AT NFS+ NKLG+GGFG V
Sbjct:   481 QLRSRDLLMNEVVISSRRHISRENNTDDLELPLMEFEEVAMATNNFSNANKLGQGGFGIV 540

Query:   521 YKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE 580
             YKG L++GQE+A KRLSK+S QG +EF+NEV LIA+LQH NLV+L+ CC    E+MLIYE
Sbjct:   541 YKGKLLDGQEMAVKRLSKTSVQGTDEFKNEVKLIARLQHINLVRLLACCVDAGEKMLIYE 600

Query:   581 YLPNKSLNDFIF 592
             YL N SL+  +F
Sbjct:   601 YLENLSLDSHLF 612

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2018546 RK1 "receptor kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1211 (431.4 bits), Expect = 3.5e-123, P = 3.5e-123
 Identities = 252/610 (41%), Positives = 369/610 (60%)

Query:     2 LIIYCFLFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKK 61
             LI+  FL +++   T   T +L  +I   +T++S ++ FELGFF+P  S   YLGIWYK 
Sbjct:    15 LILILFLAFSVSPNTLSATESL--TISSNKTIISPSQIFELGFFNPASSSRWYLGIWYKI 72

Query:    62 IGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASR-TARNPVAV- 119
             I   T +WVANRD PLS  +G L IS  GN  LV+ + ++  VWS+N +    R+PVA  
Sbjct:    73 IPIRTYVWVANRDNPLSSSNGTLKIS--GN-NLVIFDQSDRPVWSTNITGGDVRSPVAAE 129

Query:   120 LLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPA 179
             LL++GN +++D  +      LWQSFD+P+  L+A MKLG +  TG NR + SWK+ DDP+
Sbjct:   130 LLDNGNFLLRDSNN----RLLWQSFDFPTDTLLAEMKLGWDQKTGFNRILRSWKTTDDPS 185

Query:   180 QDDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVF 239
               ++   ++ S  P+       +I YR+G WNG+ ++ +P         + + +++ EV 
Sbjct:   186 SGEFSTKLETSEFPEFYICSKESILYRSGPWNGMRFSSVPGTIQVDYMVYNFTASKEEVT 245

Query:   240 YRFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYAVC 299
             Y + + K+++ S + +N  G  QRLTW E TQ W     +S    D CDNY +CG +  C
Sbjct:   246 YSYRINKTNLYSRLYLNSAGLLQRLTWFETTQSWKQLW-YSPK--DLCDNYKVCGNFGYC 302

Query:   300 NMNSNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTRFS 359
             + NS    C C++GF P +   WDL D S GC+R+T+L C+  DGF + + +KLPDT  +
Sbjct:   303 DSNS-LPNCYCIKGFKPVNEQAWDLRDGSAGCMRKTRLSCDGRDGFTRLKRMKLPDTTAT 361

Query:   360 LVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRM 419
             +VD +I L  CKE C ++C+CTA+ANAD+R GGSGC++W  +++DM+  ++ GQDL+VR+
Sbjct:   362 IVDREIGLKVCKERCLEDCNCTAFANADIRNGGSGCVIWTREILDMRNYAKGGQDLYVRL 421

Query:   420 AASELDDIERXXXXXXXXVAXXXXXXXXXXXXXXXXXFVYLWKRRHRK----------QG 469
             AA+EL+D +R                             + WKR+ ++          Q 
Sbjct:   422 AAAELED-KRIKNEKIIG-----SSIGVSILLLLSFVIFHFWKRKQKRSITIQTPNVDQV 475

Query:   470 KTDGS-------SKLDYNDRGNREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYK 522
             ++  S       S+  Y  +  + E +ELP+ +  A+A AT NFS+ NKLG+GGFG VYK
Sbjct:   476 RSQDSLINDVVVSRRGYTSKEKKSEYLELPLLELEALATATNNFSNDNKLGQGGFGIVYK 535

Query:   523 GVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL 582
             G L++G+EIA KRLSK S QG +EF NEV LIAKLQH NLV+L+GCC  + E+MLIYEYL
Sbjct:   536 GRLLDGKEIAVKRLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEYL 595

Query:   583 PNKSLNDFIF 592
              N SL+  +F
Sbjct:   596 ENLSLDSHLF 605

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0009875 "pollen-pistil interaction" evidence=TAS

GO:0016020 "membrane" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019199 "transmembrane receptor protein kinase activity" evidence=ISS

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2131694 AT4G27300 [Arabidopsis thaliana (taxid:3702)]

 Score = 1193 (425.0 bits), Expect = 2.8e-121, P = 2.8e-121
 Identities = 257/580 (44%), Positives = 361/580 (62%)

Query:    27 IRDGETLVSANESFELGFFSPGKSKS---RYLGIWYKKIGNGTVIWVANRDAPLSDRSGA 83
             ++DG+TL S ++ F+LGFFS  + +    R+LG+WY +     V+WVANR+ PL   SG 
Sbjct:    34 LKDGDTLSSPDQVFQLGFFSLDQEEQPQHRFLGLWYME--PFAVVWVANRNNPLYGTSGF 91

Query:    84 LNISSQGNATLVLLNSTNGIVWSSN-----ASRTARNPVAVLLESGNLVVKDGKDIDPDN 138
             LN+SS G+  L L +  +  +WSS+     AS+TA NP+  +  SGNL+  DG++     
Sbjct:    92 LNLSSLGD--LQLFDGEHKALWSSSSSSTKASKTANNPLLKISCSGNLISSDGEEA---- 145

Query:   139 FLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFR 198
              LWQSFDYP + ++AGMKLG N  T +   +SSWK+  DP+  D+   +D  G+PQ + R
Sbjct:   146 VLWQSFDYPMNTILAGMKLGKNFKTQMEWSLSSWKTLKDPSPGDFTLSLDTRGLPQLILR 205

Query:   199 KG--STIRYRAGSWNGLHWTGMPQL-QPNPVYTFEYVSNENEVFYRFNLIKSSVPSMMVM 255
             K   S+  YR GSWNGL +TG P + + N ++ +++ S+  EV Y +   +  + S +V+
Sbjct:   206 KNGDSSYSYRLGSWNGLSFTGAPAMGRENSLFDYKFTSSAQEVNYSWTP-RHRIVSRLVL 264

Query:   256 NPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYAVCNMNS-NSAKCECLEGF 314
             N  G   R    +Q Q W   +  +    D+CD Y++CGAYAVC +NS N+  C CL+GF
Sbjct:   265 NNTGKLHRFIQSKQNQ-W---ILANTAPEDECDYYSICGAYAVCGINSKNTPSCSCLQGF 320

Query:   315 VPKSPSEWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTRFSLVD--NKISLLECKE 372
              PKS  +W++   + GCV     +CE  D F+K   +KLPDT +S  D  N+++L +CK 
Sbjct:   321 KPKSGRKWNISRGAYGCVHEIPTNCEKKDAFVKFPGLKLPDTSWSWYDAKNEMTLEDCKI 380

Query:   373 LCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRMAASELDDIERXXX 432
              CS NCSCTAYAN D+R GG GCLLWF DL+DM+E S  GQD+++RM  ++++   R   
Sbjct:   381 KCSSNCSCTAYANTDIREGGKGCLLWFGDLVDMREYSSFGQDVYIRMGFAKIEFKGRE-- 438

Query:   433 XXXXXVAXXXXXXXXXXXXXXXXXFVYLWKRRHRKQGKTDGSSKLDYNDRGNREEEMELP 492
                  V                  F   ++++  K+ + +   K      G  EE+++LP
Sbjct:   439 -----VVGMVVGSVVAIAVVLVVVFA-CFRKKIMKRYRGENFRK------GIEEEDLDLP 486

Query:   493 IFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVL 552
             IFD   I+ AT++FS  N LG GGFGPVYKG L +GQEIA KRLS +SGQG+EEF+NEV 
Sbjct:   487 IFDRKTISIATDDFSYVNFLGRGGFGPVYKGKLEDGQEIAVKRLSANSGQGVEEFKNEVK 546

Query:   553 LIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
             LIAKLQHRNLV+L+GCC Q +E MLIYEY+PNKSL+ FIF
Sbjct:   547 LIAKLQHRNLVRLLGCCIQGEECMLIYEYMPNKSLDFFIF 586

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2018506 RK2 "receptor kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1185 (422.2 bits), Expect = 2.0e-120, P = 2.0e-120
 Identities = 250/612 (40%), Positives = 363/612 (59%)

Query:     1 MLIIYCFLFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYK 60
             + II  FL +++  +    T +L  +I   +T++S ++ FELGFF+P  S   YLGIWYK
Sbjct:    14 LFIIILFLAFSVYASNFSATESL--TISSNKTIISPSQIFELGFFNPDSSSRWYLGIWYK 71

Query:    61 KIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASR-TARNPVAV 119
              I   T +WVANRD PLS  +G L IS      LV+ + ++  VWS+N +    R+PVA 
Sbjct:    72 IIPIRTYVWVANRDNPLSSSNGTLKISDNN---LVIFDQSDRPVWSTNITGGDVRSPVAA 128

Query:   120 -LLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGV-NLVTGLNRFISSWKSADD 177
              LL+ GN V++D K+  P  FLWQSFD+P+  L++ MK+G  N   G NR + SWK+ DD
Sbjct:   129 ELLDYGNFVLRDSKNNKPSGFLWQSFDFPTDTLLSDMKMGWDNKSGGFNRILRSWKTTDD 188

Query:   178 PAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENE 237
             P+  D+   +  SG P+       +I YR+G W G  ++ +P ++P       +  N  +
Sbjct:   189 PSSGDFSTKLRTSGFPEFYIYNKESITYRSGPWLGNRFSSVPGMKPVDYIDNSFTENNQQ 248

Query:   238 VFYRFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYA 297
             V Y + + K+++ S++ ++  G  QRLTWME  Q W     +S    D CDNY  CG Y 
Sbjct:   249 VVYSYRVNKTNIYSILSLSSTGLLQRLTWMEAAQSWKQLW-YSPK--DLCDNYKECGNYG 305

Query:   298 VCNMNSNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHGDGFLKRESVKLPDTR 357
              C+ N+ S  C C++GF P +  +  L D S GCVR+T+L C+  DGF++ + ++LPDT 
Sbjct:   306 YCDANT-SPICNCIKGFEPMN-EQAALRDDSVGCVRKTKLSCDGRDGFVRLKKMRLPDTT 363

Query:   358 FSLVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFV 417
              + VD  I L EC+E C K C+CTA+AN D+R GGSGC++W   L D++  ++ GQDL+V
Sbjct:   364 ETSVDKGIGLKECEERCLKGCNCTAFANTDIRNGGSGCVIWSGGLFDIRNYAKGGQDLYV 423

Query:   418 RMAASELDDIERXXXXXXXXVAXXXXXXXXXXXXXXXXXFVYLWKRRHRKQ--------- 468
             R+AA +L+D +R                             + WKR+ ++          
Sbjct:   424 RVAAGDLED-KRIKSKKIIG-----SSIGVSILLLLSFIIFHFWKRKQKRSITIQTPIVD 477

Query:   469 -GKTDGS--SKL-----DYNDRGNREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPV 520
               ++  S  ++L      Y  + N+ + +ELP+ +W A+A AT NFS  NKLG+GGFG V
Sbjct:   478 LVRSQDSLMNELVKASRSYTSKENKTDYLELPLMEWKALAMATNNFSTDNKLGQGGFGIV 537

Query:   521 YKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE 580
             YKG+L++G+EIA KRLSK S QG +EF NEV LIAKLQH NLV+L+GCC  + E+MLIYE
Sbjct:   538 YKGMLLDGKEIAVKRLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYE 597

Query:   581 YLPNKSLNDFIF 592
             YL N SL+  +F
Sbjct:   598 YLENLSLDSHLF 609

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0034613 "cellular protein localization" evidence=IGI

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

TAIR|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)]

 Score = 1063 (379.3 bits), Expect = 1.7e-107, P = 1.7e-107
 Identities = 249/633 (39%), Positives = 355/633 (56%)

Query:     2 LIIYCFLFYTIRTATARDTLNLGQSIRDG---ETLVSANESFELGFFSPGKSKSRYLGIW 58
             L +Y FL+    ++ A +T+  G+S+RDG   + LVS  ++FELGFFSPG S  R+LGIW
Sbjct:    13 LFLYFFLY---ESSMAANTIRRGESLRDGINHKPLVSPQKTFELGFFSPGSSTHRFLGIW 69

Query:    59 YKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNA-SRTARNP- 116
             Y  I +  V+WVANR  P+SD+SG L IS+ GN  LVLL+  N  VWSSN  S T  N  
Sbjct:    70 YGNIEDKAVVWVANRATPISDQSGVLMISNDGN--LVLLDGKNITVWSSNIESSTTNNNN 127

Query:   117 -VAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSA 175
              V  + ++GN V+ +    D D  +W+SF++P+   +  M++ VN  TG N    SW+S 
Sbjct:   128 RVVSIHDTGNFVLSE---TDTDRPIWESFNHPTDTFLPQMRVRVNPQTGDNHAFVSWRSE 184

Query:   176 DDPAQDDYVYGIDPSGVPQAVFRKGS-TIRYRAGSWNGLHWTGMPQLQ--PNPVYTFEYV 232
              DP+  +Y  G+DPSG P+ V  +G+ T ++R+G WN   +TG+P +    N +Y F+  
Sbjct:   185 TDPSPGNYSLGVDPSGAPEIVLWEGNKTRKWRSGQWNSAIFTGIPNMSLLTNYLYGFKLS 244

Query:   233 SNENEVFYRFNLIKSSVPSMMVMNPL---GDPQRLTWMEQTQKWAPFVPFSGLILDQCDN 289
             S  +E    +     S PS+++   +   G  + L W E  +KW  F         +CD 
Sbjct:   245 SPPDETGSVYFTYVPSDPSVLLRFKVLYNGTEEELRWNETLKKWTKFQSEPD---SECDQ 301

Query:   290 YALCGAYAVCNMNSNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHG-----DG 344
             Y  CG + +C+M  ++  C C+ G+   S   W     S GC RRT L CE       D 
Sbjct:   302 YNRCGKFGICDMKGSNGICSCIHGYEQVSVGNW-----SRGCRRRTPLKCERNISVGEDE 356

Query:   345 FLKRESVKLPDTRFSLVD-NKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLI 403
             FL  +SVKLPD  F + + N +   +C+E C +NCSC AY+      GG GC++W  DL+
Sbjct:   357 FLTLKSVKLPD--FEIPEHNLVDPEDCRERCLRNCSCNAYSLV----GGIGCMIWNQDLV 410

Query:   404 DMKELSESGQDLFVRMAASELDDIERXXXXXXXXVAXXXXXXXXXXXXXXXXXFVYLWKR 463
             D+++    G  L +R+A SE+ +  +        V                   + LW+ 
Sbjct:   411 DLQQFEAGGSSLHIRLADSEVGENRKTKIAVIVAVLVGVILIGIFA--------LLLWRF 462

Query:   464 RHRKQ------GK-TDGS--------SK---------LDYNDRGNREEEMELPIFDWMAI 499
             + +K       GK TD S        SK         +D    G      ELP+F   AI
Sbjct:   463 KRKKDVSGAYCGKNTDTSVVVADLTKSKETTSAFSGSVDIMIEGKAVNTSELPVFSLNAI 522

Query:   500 ANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQH 559
             A AT +F  +N+LG GGFGPVYKGVL +G+EIA KRLS  SGQG++EF+NE++LIAKLQH
Sbjct:   523 AIATNDFCKENELGRGGFGPVYKGVLEDGREIAVKRLSGKSGQGVDEFKNEIILIAKLQH 582

Query:   560 RNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
             RNLV+L+GCC + +E+ML+YEY+PNKSL+ F+F
Sbjct:   583 RNLVRLLGCCFEGEEKMLVYEYMPNKSLDFFLF 615

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2200908 AT1G61610 [Arabidopsis thaliana (taxid:3702)]

 Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
 Identities = 231/617 (37%), Positives = 347/617 (56%)

Query:     2 LIIYCFLFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKK 61
             L+I+  L   +  +T+ ++     +IR+G++L+S +ESFELGFF+P  S  RY+GIWYK 
Sbjct:    14 LLIFHQLCSNVSCSTS-NSFTRNHTIREGDSLISEDESFELGFFTPKNSTLRYVGIWYKN 72

Query:    62 IGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLL 121
             I   TV+WVANR+ PL D  GAL I+  GN  LV++N  N  +WS+N    + N VAVL 
Sbjct:    73 IEPQTVVWVANREKPLLDHKGALKIADDGN--LVIVNGQNETIWSTNVEPESNNTVAVLF 130

Query:   122 ESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQD 181
             ++G+LV+    D D   + W+SF+ P+   + GM++ VN   G NR    WKS  DP+  
Sbjct:   131 KTGDLVLCS--DSDRRKWYWESFNNPTDTFLPGMRVRVNPSLGENRAFIPWKSESDPSPG 188

Query:   182 DYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQ--PNPVYTFEYVS---NEN 236
              Y  GIDP G  + V  +G   ++R+G WN   +TG+P +    N +Y F+  S    + 
Sbjct:   189 KYSMGIDPVGALEIVIWEGEKRKWRSGPWNSAIFTGIPDMLRFTNYIYGFKLSSPPDRDG 248

Query:   237 EVFYRFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKW--APFVPFSGLILDQCDNYALCG 294
              V++ +    SS      + P G  ++  W +  + W    + P +     +C+ Y  CG
Sbjct:   249 SVYFTYVASDSSDFLRFWIRPDGVEEQFRWNKDIRNWNLLQWKPST-----ECEKYNRCG 303

Query:   295 AYAVCNMNS--NSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEHG------DGFL 346
              Y+VC+ +   +S KC C++GF P    +W+  D S GC RR  L+C         DGF 
Sbjct:   304 NYSVCDDSKEFDSGKCSCIDGFEPVHQDQWNNRDFSGGCQRRVPLNCNQSLVAGQEDGFT 363

Query:   347 KRESVKLPDTRFSLVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMK 406
               + +K+PD    ++ N      CK++C+++CSC AYA       G GC++W  DLIDM+
Sbjct:   364 VLKGIKVPDFGSVVLHNNSET--CKDVCARDCSCKAYALVV----GIGCMIWTRDLIDME 417

Query:   407 ELSESGQDLFVRMAASELDDIERXXXXXXXXVAXXXXXXXXXXXXXXXXXF-----VYLW 461
                  G  + +R+A S+L    +        V                  F      +LW
Sbjct:   418 HFERGGNSINIRLAGSKLGG-GKENSTLWIIVFSVIGAFLLGLCIWILWKFKKSLKAFLW 476

Query:   462 KRRHRKQGKTDGSSKLDYNDR------GNREEEMELPIFDWMAIANATENFSDKNKLGEG 515
             K++      +D     DY+        G++ +  +LPIF + ++A+AT +F+++NKLG+G
Sbjct:   477 KKKDITV--SDIIENRDYSSSPIKVLVGDQVDTPDLPIFSFDSVASATGDFAEENKLGQG 534

Query:   516 GFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDER 575
             GFG VYKG   EG+EIA KRLS  S QG+EEF+NE+LLIAKLQHRNLV+L+GCC + +E+
Sbjct:   535 GFGTVYKGNFSEGREIAVKRLSGKSKQGLEEFKNEILLIAKLQHRNLVRLLGCCIEDNEK 594

Query:   576 MLIYEYLPNKSLNDFIF 592
             ML+YEY+PNKSL+ F+F
Sbjct:   595 MLLYEYMPNKSLDRFLF 611

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

TAIR|locus:2200151 SD1-13 "S-domain-1 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 970 (346.5 bits), Expect = 1.2e-97, P = 1.2e-97
 Identities = 223/615 (36%), Positives = 338/615 (54%)

Query:     1 MLIIYCFLFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYK 60
             ++++   + +++R   A D +      RD ET+VS + +F  GFFSP  S  RY GIW+ 
Sbjct:     5 LILLLTLICFSLRLCLATDVITFSSEFRDSETVVSNHSTFRFGFFSPVNSTGRYAGIWFN 64

Query:    61 KIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNAS-RTARNPV-A 118
              I   TV+WVAN ++P++D SG ++IS +GN  LV+++    + WS+N     A N   A
Sbjct:    65 NIPVQTVVWVANSNSPINDSSGMVSISKEGN--LVVMDGRGQVHWSTNVLVPVAANTFYA 122

Query:   119 VLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDP 178
              LL +GNLV+  G     D  LW+SF++P +I +  M L  +  TG +  + SWKS  DP
Sbjct:   123 RLLNTGNLVLL-GTTNTGDEILWESFEHPQNIYLPTMSLATDTKTGRSLKLRSWKSPFDP 181

Query:   179 AQDDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEY-VSNENE 237
             +   Y  G+ P   P+ V  K   + +R+G WNG ++ G+P +    +  FE  +S++N 
Sbjct:   182 SPGRYSAGLIPLPFPELVVWKDDLLMWRSGPWNGQYFIGLPNMDYR-INLFELTLSSDNR 240

Query:   238 VFYRFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYA 297
                  +   +++    +++  G   +  W    Q+W  ++        +CD YA CG +A
Sbjct:   241 GSVSMSYAGNTLLYHFLLDSEGSVFQRDWNVAIQEWKTWLKVPST---KCDTYATCGQFA 297

Query:   298 VCNMNSNSAK-CECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCEH---------GDGFLK 347
              C  N  S   C C+ GF P+S +EW+  + + GCVR+  L CE           DGF++
Sbjct:   298 SCRFNPGSTPPCMCIRGFKPQSYAEWNNGNWTQGCVRKAPLQCESRDNNDGSRKSDGFVR 357

Query:   348 RESVKLPDTRFSLVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKE 407
              + +K+P        N+    +C E C KNCSCTAY+  D RG   GCLLW  +L+DM+E
Sbjct:   358 VQKMKVPHNPQRSGANE---QDCPESCLKNCSCTAYS-FD-RG--IGCLLWSGNLMDMQE 410

Query:   408 LSESGQDLFVRMAASELDDIERXXXXXXXXVAXXXXXXXXXXXXXXXXXFVYLWK-RRHR 466
              S +G   ++R+A SE    +R        V                     LWK  +HR
Sbjct:   411 FSGTGVVFYIRLADSEFK--KRTNRSIVITVTLLVGAFLFAGTVVLA-----LWKIAKHR 463

Query:   467 KQGKT-----DGSSKLDYNDRG----NREEEMELPIFDWMAIANATENFSDKNKLGEGGF 517
             ++ +      +    L  ND G    N+ +  ELP+F++  +A AT NFS  NKLG+GGF
Sbjct:   464 EKNRNTRLLNERMEALSSNDVGAILVNQYKLKELPLFEFQVLAVATNNFSITNKLGQGGF 523

Query:   518 GPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML 577
             G VYKG L EG +IA KRLS++SGQG+EEF NEV++I+KLQHRNLV+L+G C + +ERML
Sbjct:   524 GAVYKGRLQEGLDIAVKRLSRTSGQGVEEFVNEVVVISKLQHRNLVRLLGFCIEGEERML 583

Query:   578 IYEYLPNKSLNDFIF 592
             +YE++P   L+ ++F
Sbjct:   584 VYEFMPENCLDAYLF 598

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

GO:0009637 "response to blue light" evidence=RCA

GO:0010155 "regulation of proton transport" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

TAIR|locus:2197704 AT1G61390 [Arabidopsis thaliana (taxid:3702)]

 Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
 Identities = 216/608 (35%), Positives = 328/608 (53%)

Query:     1 MLIIYCFLFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYK 60
             M+I  C L   I        +N    +  G+TL S +  +ELGFFSP  S+ +Y+GIW+K
Sbjct:    24 MVIFACLLLLIIFPTFGYADINTSSPLSIGQTLSSPDGVYELGFFSPNNSRKQYVGIWFK 83

Query:    61 KIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVL 120
              I    V+WVANRD P++  +  L ISS G+  L+LL+ T  ++WS+  + T+    A L
Sbjct:    84 NIAPQVVVWVANRDKPVTKTAANLTISSNGS--LILLDGTQDVIWSTGEAFTSNKCHAEL 141

Query:   121 LESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQ 180
             L++GNLVV D  D+     LW+SF+   + ++    +  ++  G NR ++SW+S  DP+ 
Sbjct:   142 LDTGNLVVID--DVSGKT-LWKSFENLGNTMLPQSSVMYDIPRGKNRVLTSWRSNSDPSP 198

Query:   181 DDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSN--ENEV 238
              ++     P   PQ + R+GS+  +R+G W    ++G+P +  + V  F  + +  +   
Sbjct:   199 GEFTLEFTPQVPPQGLIRRGSSPYWRSGPWAKTRFSGIPGIDASYVSPFTVLQDVAKGTA 258

Query:   239 FYRFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLILDQCDNYALCGAYAV 298
              + ++++++   S + +   G   ++ W +  + W   + F       CD Y  CG + +
Sbjct:   259 SFSYSMLRNYKLSYVTLTSEGK-MKILWNDG-KSWK--LHFEAPT-SSCDLYRACGPFGL 313

Query:   299 CNMNSNSAKCECLEGFVPKSPSEWDLLDKSDGCVRRTQLDCE-------HG---DGFLKR 348
             C + S + KC CL+GFVPKS  EW   + + GCVRRTQL C         G   D F   
Sbjct:   314 C-VRSRNPKCICLKGFVPKSDDEWKKGNWTSGCVRRTQLSCHTNSSTKTQGKETDSFYHM 372

Query:   349 ESVKLPDTRFSLVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKEL 408
               VK PD  + L    ++  +C + C  NCSCTA+A       G GCL+W  +L+D  + 
Sbjct:   373 TRVKTPDL-YQLA-GFLNAEQCYQDCLGNCSCTAFAYIS----GIGCLVWNRELVDTVQF 426

Query:   409 SESGQDLFVRMAASELDDIERXXXXXXXXVAXXXXXXXXXXXXXXXXXFVYLWKRRHRKQ 468
                G+ L +R+A+SEL    R        V+                     W+ R  KQ
Sbjct:   427 LSDGESLSLRLASSELAGSNRTKIILGTTVSLSIFVILVFAAYKS-------WRYR-TKQ 478

Query:   469 GKTDGSSKLDYNDRGNREEEME----LPIFDWMAIANATENFSDKNKLGEGGFGPVYKGV 524
              + +        D   ++ E +    + +FD   I  AT NFS  NKLG+GGFGPVYKG 
Sbjct:   479 NEPNPMFIHSSQDAWAKDMEPQDVSGVNLFDMHTIRTATNNFSSSNKLGQGGFGPVYKGK 538

Query:   525 LIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPN 584
             L++G+EIA KRLS SSGQG +EF NE+ LI+KLQH+NLV+L+GCC + +E++LIYEYL N
Sbjct:   539 LVDGKEIAVKRLSSSSGQGTDEFMNEIRLISKLQHKNLVRLLGCCIKGEEKLLIYEYLVN 598

Query:   585 KSLNDFIF 592
             KSL+ F+F
Sbjct:   599 KSLDVFLF 606

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2197734 AT1G61370 [Arabidopsis thaliana (taxid:3702)]

 Score = 916 (327.5 bits), Expect = 6.3e-92, P = 6.3e-92
 Identities = 208/581 (35%), Positives = 319/581 (54%)

Query:    30 GETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQ 89
             G+TL S N ++ELGFFSP  S+++Y+GIW+K I    V+WVANRD P+++ +  L I+S 
Sbjct:    36 GQTLSSPNGTYELGFFSPNNSRNQYVGIWFKNITPRVVVWVANRDKPVTNNAANLTINSN 95

Query:    90 GNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSH 149
             G+  L+L+     +VWS   + ++    A LLE+GNLV+ DG  +   N LW+SF++   
Sbjct:    96 GS--LILVEREQNVVWSIGETFSSNELRAELLENGNLVLIDG--VSERN-LWESFEHLGD 150

Query:   150 ILIAGMKLGVNLVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGS 209
              ++    +  ++     R +SSWK+  DP+  ++V  +     PQ    +GS   +R G 
Sbjct:   151 TMLLESSVMYDVPNNKKRVLSSWKNPTDPSPGEFVAELTTQVPPQGFIMRGSRPYWRGGP 210

Query:   210 WNGLHWTGMPQLQPNPVYTFEY----VSNENEVFYRFNLIKSSVPSMMVMNPLGDPQRLT 265
             W  + +TG+P++  + V  F+      +    + Y      S++ S   +   G   ++ 
Sbjct:   211 WARVRFTGIPEMDGSHVSKFDISQDVAAGTGSLTYSLERRNSNL-SYTTLTSAGS-LKII 268

Query:   266 WMEQTQKWAPFVPFSGLILDQCDNYALCGAYAVCNMNSNSAKCECLEGFVPKSPSEWDLL 325
             W      W   +      +  CD Y  CG + +C + SN  KCECL+GFVPKS  EW+  
Sbjct:   269 W-NNGSGWVTDLEAP---VSSCDVYNTCGPFGLC-IRSNPPKCECLKGFVPKSDEEWNKR 323

Query:   326 DKSDGCVRRTQLDCE----------HGDGFLKRESVKLPD--TRFSLVDNKISLLECKEL 373
             + + GC+RRT L C+          +GD F    +VK PD     SL++ +    +C++ 
Sbjct:   324 NWTGGCMRRTNLSCDVNSSATAQANNGDIFDIVANVKPPDFYEYLSLINEE----DCQQR 379

Query:   374 CSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRMAASELDDIERXXXX 433
             C  NCSCTA++  +      GCL+W  +L+D+ +    G+ L +R+A+SEL    R    
Sbjct:   380 CLGNCSCTAFSYIEQ----IGCLVWNRELVDVMQFVAGGETLSIRLASSELAGSNRVKII 435

Query:   434 XXXXVAXXXXXXXXXXXXXXXXXFVYLWKRRHRKQGKTDGSSKLDYNDRGNREE--EMEL 491
                 V+                 F   W  R++ +        L+ +    RE+    ++
Sbjct:   436 VASIVSISVFMILV---------FASYWYWRYKAKQNDSNPIPLETSQDAWREQLKPQDV 486

Query:   492 PIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEV 551
               FD   I   T NFS +NKLG+GGFGPVYKG L +G+EIA KRLS +SGQG+EEF NE+
Sbjct:   487 NFFDMQTILTITNNFSMENKLGQGGFGPVYKGNLQDGKEIAIKRLSSTSGQGLEEFMNEI 546

Query:   552 LLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
             +LI+KLQHRNLV+L+GCC + +E++LIYE++ NKSLN FIF
Sbjct:   547 ILISKLQHRNLVRLLGCCIEGEEKLLIYEFMANKSLNTFIF 587

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.11	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	617
cd00028	116	cd00028, B_lectin, Bulb-type mannose-specific lect	4e-39
pfam01453	109	pfam01453, B_lectin, D-mannose binding lectin	2e-38
smart00108	114	smart00108, B_lectin, Bulb-type mannose-specific l	3e-36
pfam00954	110	pfam00954, S_locus_glycop, S-locus glycoprotein fa	1e-32
pfam08276	66	pfam08276, PAN_2, PAN-like domain	2e-27
cd01098	84	cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain	2e-23
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-19
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-19
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-17
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	4e-17
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	8e-16
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	6e-14
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	2e-13
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	5e-13
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	7e-13
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-12
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	8e-12
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	1e-11
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	6e-11
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	5e-10
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	9e-10
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	1e-09
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	1e-09
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-09
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	2e-09
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	4e-09
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	5e-09
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	5e-09
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	6e-09
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	7e-09
smart00473	78	smart00473, PAN_AP, divergent subfamily of APPLE d	8e-09
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-08
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	3e-08
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	4e-08
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	5e-08
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	6e-08
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-07
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	3e-07
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	3e-07
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-07
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	4e-07
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	5e-07
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	5e-07
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	8e-07
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	8e-07
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	9e-07
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	1e-06
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	1e-06
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-06
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	1e-06
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	2e-06
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	2e-06
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-06
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	3e-06
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	3e-06
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	3e-06
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	3e-06
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	4e-06
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	4e-06
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	7e-06
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	1e-05
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	1e-05
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	2e-05
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	2e-05
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	2e-05
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	3e-05
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	3e-05
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	3e-05
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	3e-05
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	3e-05
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	4e-05
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	4e-05
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	5e-05
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	6e-05
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	6e-05
cd00129	80	cd00129, PAN_APPLE, PAN/APPLE-like domain; present	6e-05
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	7e-05
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	8e-05
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	9e-05
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	9e-05
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	1e-04
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-04
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	1e-04
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	1e-04
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	2e-04
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	2e-04
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-04
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	2e-04
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	2e-04
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	3e-04
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	3e-04
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	3e-04
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-04
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	3e-04
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	4e-04
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	4e-04
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	4e-04
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	4e-04
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	4e-04
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	5e-04
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	5e-04
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	6e-04
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	6e-04
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	7e-04
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	0.001
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	0.001
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	0.001
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	0.001
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	0.002
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	0.002
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	0.002
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	0.002
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	0.002
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	0.003
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	0.003
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	0.003
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	0.003
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	0.003
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	0.004

>gnl|CDD|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin

 Score =  138 bits (351), Expect = 4e-39
 Identities = 58/123 (47%), Positives = 71/123 (57%), Gaps = 8/123 (6%)

Query: 25  QSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGAL 84
             +  G+TLVS+   FELGFF        Y  I YK   + TV+WVANRD P S  S  L
Sbjct: 2   NPLSSGQTLVSSGSLFELGFFKLIMQSRDYNLILYKGS-SRTVVWVANRDNP-SGSSCTL 59

Query: 85  NISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSF 144
            + S GN  LV+ + +  +VWSSN +R   N V VLL+ GNLV+ D       NFLWQSF
Sbjct: 60  TLQSDGN--LVIYDGSGTVVWSSNTTRVNGNYVLVLLDDGNLVLYDSD----GNFLWQSF 113

Query: 145 DYP 147
           DYP
Sbjct: 114 DYP 116

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses. Length = 116

>gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin

 Score =  137 bits (346), Expect = 2e-38
 Identities = 55/116 (47%), Positives = 71/116 (61%), Gaps = 7/116 (6%)

Query: 64  NGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLES 123
           N TV+WVANR  PL+D S  L + S GN  LVL +    +VWSSN S      VAVL + 
Sbjct: 1   NQTVVWVANRLNPLTDSSYTLILQSDGN--LVLYDGNGRVVWSSNTSGKGSGCVAVLQDD 58

Query: 124 GNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPA 179
           GNLV+ D    +    LWQSFD+P+  L+ G K G N+V G +R ++SWKS  DP+
Sbjct: 59  GNLVLYD----NSGKVLWQSFDHPTDTLLPGQKDG-NVVIGGSRRLTSWKSNTDPS 109

These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109

>gnl|CDD|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin

 Score =  131 bits (331), Expect = 3e-36
 Identities = 59/122 (48%), Positives = 72/122 (59%), Gaps = 9/122 (7%)

Query: 25  QSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGAL 84
            ++  G+TLVS N  FELGFF+       Y  I YK   + TV+WVANRD P+SD S  L
Sbjct: 2   NTLSSGQTLVSGNSLFELGFFTLIMQN-DYNLILYKSS-SRTVVWVANRDNPVSD-SCTL 58

Query: 85  NISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSF 144
            + S GN  LVL +    +VWSSN +    N V VLL+ GNLV+ D       NFLWQSF
Sbjct: 59  TLQSDGN--LVLYDGDGRVVWSSNTTGANGNYVLVLLDDGNLVIYD----SDGNFLWQSF 112

Query: 145 DY 146
           DY
Sbjct: 113 DY 114

Length = 114

>gnl|CDD|201524 pfam00954, S_locus_glycop, S-locus glycoprotein family

 Score =  120 bits (304), Expect = 1e-32
 Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 8/116 (6%)

Query: 205 YRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVFYRFNLIKSSVPSMMVMNPLGDPQRL 264
           +R+G WNG+ ++G+P++Q    Y + +  N  EV+Y + +  +S+ S + ++  G  +R 
Sbjct: 1   WRSGPWNGIRFSGIPEMQKLSYYVYNFTENNEEVYYTYRMTNNSIYSRLTLSSEGSLERF 60

Query: 265 TWMEQTQKWAPF--VPFSGLILDQCDNYALCGAYAVCNMNSNSAKCECLEGFVPKS 318
           TW+  +Q W  F   P      DQCD Y  CG Y  C++N  S KC C++GFVPK+
Sbjct: 61  TWIPNSQDWNLFWSAP-----KDQCDVYGRCGPYGYCDVN-TSPKCNCIKGFVPKN 110

In Brassicaceae, self-incompatible plants have a self/non-self recognition system. This is sporophytically controlled by multiple alleles at a single locus (S). S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles. Length = 110

>gnl|CDD|219774 pfam08276, PAN_2, PAN-like domain

 Score =  104 bits (262), Expect = 2e-27
 Identities = 39/67 (58%), Positives = 50/67 (74%), Gaps = 1/67 (1%)

Query: 339 CEHGDGFLKRESVKLPDTRFSLVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLW 398
           C  GDGFL+  ++KLPDT  ++VD  I L EC++ C  NCSCTAYA AD+R GGSGCL+W
Sbjct: 1   CGGGDGFLRLPNMKLPDTTAAIVDRSIGLKECEQRCLSNCSCTAYAYADIR-GGSGCLIW 59

Query: 399 FHDLIDM 405
             +L+DM
Sbjct: 60  TGELVDM 66

Length = 66

>gnl|CDD|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

 Score = 94.0 bits (234), Expect = 2e-23
 Identities = 41/89 (46%), Positives = 51/89 (57%), Gaps = 8/89 (8%)

Query: 335 TQLDCEHG---DGFLKRESVKLPDTRFSLVDNKISLLECKELCSKNCSCTAYANADVRGG 391
           T L+C      DGFLK   VKLPD   +     ISL EC+E C  NCSCTAYA  +   G
Sbjct: 1   TPLNCGGDGSTDGFLKLPDVKLPDN--ASAITAISLEECREACLSNCSCTAYAYNN---G 55

Query: 392 GSGCLLWFHDLIDMKELSESGQDLFVRMA 420
             GCLLW   L +++ LS  G  L++R+A
Sbjct: 56  SGGCLLWNGLLNNLRSLSSGGGTLYLRLA 84

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization. Length = 84

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 88.4 bits (220), Expect = 1e-19
 Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 6/89 (6%)

Query: 509 KNKLGEGGFGPVYKGVLI-----EGQEIAAKRLSK-SSGQGMEEFENEVLLIAKLQHRNL 562
             KLGEG FG VYKG L      +  E+A K L + +S Q +EEF  E  ++ KL H N+
Sbjct: 4   GKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNV 63

Query: 563 VKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           VKL+G CT+ +   ++ EY+    L  ++
Sbjct: 64  VKLLGVCTEEEPLYIVMEYMEGGDLLSYL 92

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 88.0 bits (219), Expect = 2e-19
 Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 6/87 (6%)

Query: 511 KLGEGGFGPVYKGVLI-----EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVK 564
           KLGEG FG VYKG L      +  E+A K L +  S Q +EEF  E  ++ KL H N+VK
Sbjct: 6   KLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVK 65

Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT+ +  M++ EY+P   L D++
Sbjct: 66  LLGVCTEEEPLMIVMEYMPGGDLLDYL 92

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 82.6 bits (205), Expect = 1e-17
 Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 5/87 (5%)

Query: 510 NKLGEGGFGPVYKGVLIEGQ----EIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVK 564
            KLGEG FG VYKG L        E+A K L +  S +  ++F  E  ++ KL H N+V+
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT+ +   L+ EY+    L D++
Sbjct: 61  LLGVCTEEEPLYLVLEYMEGGDLLDYL 87

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 81.4 bits (202), Expect = 4e-17
 Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 6/87 (6%)

Query: 511 KLGEGGFGPVYKGVLIE-----GQEIAAKRLSKSSG-QGMEEFENEVLLIAKLQHRNLVK 564
           KLGEG FG VYKG L         ++A K L + +  +  EEF  E  ++ KL H N+V+
Sbjct: 6   KLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVR 65

Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CTQ +   ++ EY+P   L DF+
Sbjct: 66  LLGVCTQGEPLYIVTEYMPGGDLLDFL 92

Length = 258

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 76.1 bits (188), Expect = 8e-16
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 4/99 (4%)

Query: 512 LGEGGFGPVYKGV-LIEGQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
           LGEGGFG VY       G+++A K + K  S   +EE   E+ ++ KL H N+VKL G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 570 TQRDERMLIYEYLPNKSLNDFI--FGFLYTEHFFWSFFF 606
              +   L+ EY    SL D +       +E        
Sbjct: 61  EDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILL 99

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 71.8 bits (177), Expect = 6e-14
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)

Query: 506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEE-FENEVLLIAKLQHRNLV 563
           +    KLGEG FG VY     + G+ +A K + K   +   E    E+ ++ KL+H N+V
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +L       D+  L+ EY     L D +
Sbjct: 61  RLYDVFEDEDKLYLVMEYCEGGDLFDLL 88

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 70.9 bits (174), Expect = 2e-13
 Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 7/90 (7%)

Query: 509 KNKLGEGGFGPVYKG---VLIEGQE---IAAKRLSKSSGQGMEE-FENEVLLIAKLQHRN 561
           K +LGEG FG V+ G    L    +   +A K L +++     + FE E  L+   QH N
Sbjct: 10  KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHEN 69

Query: 562 LVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +VK  G CT+ D  ++++EY+ +  LN F+
Sbjct: 70  IVKFYGVCTEGDPPIMVFEYMEHGDLNKFL 99

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 69.4 bits (170), Expect = 5e-13
 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 7/87 (8%)

Query: 512 LGEGGFGPVYKGVLI------EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVK 564
           LGEG FG VYKG L           +A K L ++   +  +EF  E  L++ LQH N+V 
Sbjct: 13  LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72

Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT+     +++EYL +  L++F+
Sbjct: 73  LLGVCTKEQPTCMLFEYLAHGDLHEFL 99

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 68.4 bits (168), Expect = 7e-13
 Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 1/85 (1%)

Query: 506 FSDKNKLGEGGFGPVYKG-VLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
           F    K+G+GGFG VYK      G+E+A K +   S +  E+  NE+ ++ K +H N+VK
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVK 61

Query: 565 LIGCCTQRDERMLIYEYLPNKSLND 589
             G   ++DE  ++ E+    SL D
Sbjct: 62  YYGSYLKKDELWIVMEFCSGGSLKD 86

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 68.0 bits (167), Expect = 1e-12
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%)

Query: 511 KLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFE---NEVLLIAKLQHRNLVKLI 566
           KLG G FG VYK      G+ +A K L K S +  ++ +    E+ ++ +L H N+V+LI
Sbjct: 6   KLGSGSFGTVYKAKHKGTGKIVAVKILKKRS-EKSKKDQTARREIRILRRLSHPNIVRLI 64

Query: 567 GCCTQRDERMLIYEYLPNKSLNDFI 591
                +D   L+ EY     L D++
Sbjct: 65  DAFEDKDHLYLVMEYCEGGDLFDYL 89

Length = 260

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 65.3 bits (160), Expect = 8e-12
 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 5/87 (5%)

Query: 510 NKLGEGGFGPVYKGVLIE-GQEIAAK--RLSKSSGQGMEEFENEVLLIAKLQHRNLVKLI 566
             LG G FG VY  +  + G+ +A K   LS  S + +E  E E+ +++ LQH N+V+  
Sbjct: 6   ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65

Query: 567 GCCTQRDERML-IY-EYLPNKSLNDFI 591
           G     ++  L I+ EY+   SL+  +
Sbjct: 66  GSERDEEKNTLNIFLEYVSGGSLSSLL 92

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 65.1 bits (159), Expect = 1e-11
 Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 8/90 (8%)

Query: 510 NKLGEGGFGPVYKGVLI-----EGQEIAAKRLSKSSG-QGMEEFENEVLLIAKLQHRNLV 563
            +LGEG FG V            G+++A K L+ S   Q   +FE E+ ++  L H N+V
Sbjct: 10  KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIV 69

Query: 564 KLIGCCTQRDER--MLIYEYLPNKSLNDFI 591
           K  G C +   R   LI EYLP+ SL D++
Sbjct: 70  KYKGVCEKPGGRSLRLIMEYLPSGSLRDYL 99

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 63.0 bits (154), Expect = 6e-11
 Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 3/90 (3%)

Query: 505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRN 561
           N+   + +G G FG VYKG+ +E G  +A K++S      + ++    E+ L+  L+H N
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60

Query: 562 LVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +VK IG     D   +I EY  N SL   I
Sbjct: 61  IVKYIGSIETSDSLYIILEYAENGSLRQII 90

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 60.1 bits (146), Expect = 5e-10
 Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 9/87 (10%)

Query: 512 LGEGGFGPVYKGVLI-EGQ----EIAAKRLSKSSG-QGMEEFENEVLLIAKLQHRNLVKL 565
           LG G FG VYKGV I EG+     +A K L + +  +  +E  +E  ++A + H ++V+L
Sbjct: 15  LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74

Query: 566 IGCC-TQRDERMLIYEYLPNKSLNDFI 591
           +G C + +    LI + +P   L D++
Sbjct: 75  LGICLSSQ--VQLITQLMPLGCLLDYV 99

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 59.8 bits (145), Expect = 9e-10
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 7/97 (7%)

Query: 502 ATENFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRL-SKSSGQGMEEFENEVLLI 554
             ++ +    LG G FG VY+G+           ++A K L    S Q   +F  E L++
Sbjct: 4   PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIM 63

Query: 555 AKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +K  H+N+V+LIG   +R  R ++ E +    L  F+
Sbjct: 64  SKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFL 100

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 59.5 bits (144), Expect = 1e-09
 Identities = 28/83 (33%), Positives = 48/83 (57%)

Query: 509 KNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGC 568
           K+KLG G +G VY+GV  +     A +  K     +EEF  E  ++ +++H NLV+L+G 
Sbjct: 11  KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 70

Query: 569 CTQRDERMLIYEYLPNKSLNDFI 591
           CT+     +I E++   +L D++
Sbjct: 71  CTREPPFYIITEFMTYGNLLDYL 93

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 59.0 bits (143), Expect = 1e-09
 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 2/83 (2%)

Query: 509 KNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGC 568
              +G+G FG V  G    GQ++A K L K      + F  E  ++  L+H NLV+L+G 
Sbjct: 11  GATIGKGEFGDVMLGDY-RGQKVAVKCL-KDDSTAAQAFLAEASVMTTLRHPNLVQLLGV 68

Query: 569 CTQRDERMLIYEYLPNKSLNDFI 591
             Q +   ++ EY+   SL D++
Sbjct: 69  VLQGNPLYIVTEYMAKGSLVDYL 91

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 58.6 bits (142), Expect = 2e-09
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 1/82 (1%)

Query: 511 KLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGM-EEFENEVLLIAKLQHRNLVKLIGCC 569
           K+G+G FG VYKGVL    E+A K    +    +  +F  E  ++ +  H N+VKLIG C
Sbjct: 2   KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61

Query: 570 TQRDERMLIYEYLPNKSLNDFI 591
            Q+    ++ E +P  SL  F+
Sbjct: 62  VQKQPIYIVMELVPGGSLLTFL 83

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 58.1 bits (141), Expect = 2e-09
 Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 6/87 (6%)

Query: 510 NKLGEGGFGPVYKGVLIE--GQEI--AAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVK 564
            +LG G FG V KGV +   G+E+  A K L +     G +EF  E  ++A+L H  +V+
Sbjct: 1   KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVR 60

Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           LIG C + +  ML+ E  P   L  ++
Sbjct: 61  LIGVC-KGEPLMLVMELAPLGPLLKYL 86

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 57.7 bits (139), Expect = 4e-09
 Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 7/88 (7%)

Query: 511 KLGEGGFGPVYKGVLI------EGQEIAAKRLS-KSSGQGMEEFENEVLLIAKLQHRNLV 563
           +LGE  FG VYKG L       + Q +A K L  K+ G   EEF++E ++ ++LQH N+V
Sbjct: 12  ELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIV 71

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
            L+G  T+     +I+ Y  +  L++F+
Sbjct: 72  CLLGVVTKEQPLSMIFSYCSHSDLHEFL 99

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 57.3 bits (138), Expect = 5e-09
 Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 1/81 (1%)

Query: 511 KLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCT 570
           ++G G FG V+ G  +E +++A K + +      E+F  E  ++ KL H  LV+L G CT
Sbjct: 11  EIGSGQFGLVWLGYWLEKRKVAIKTI-REGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCT 69

Query: 571 QRDERMLIYEYLPNKSLNDFI 591
           +R    L++E++ +  L+D++
Sbjct: 70  ERSPICLVFEFMEHGCLSDYL 90

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 57.4 bits (138), Expect = 5e-09
 Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 6/93 (6%)

Query: 505 NFSDKNKLGEGGFGPVYKGV---LIEGQE---IAAKRLSKSSGQGMEEFENEVLLIAKLQ 558
           N   K +LGEG FG V+      L   Q+   +A K L  +S    ++F  E  L+  LQ
Sbjct: 6   NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ 65

Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           H ++VK  G C + D  ++++EY+ +  LN F+
Sbjct: 66  HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFL 98

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 56.9 bits (138), Expect = 6e-09
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 1/88 (1%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E+   + KLG G FG V+ G      ++A K L K      E F  E  ++ KL+H  LV
Sbjct: 6   ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTL-KPGTMSPEAFLQEAQIMKKLRHDKLV 64

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +L   C++ +   ++ EY+   SL DF+
Sbjct: 65  QLYAVCSEEEPIYIVTEYMSKGSLLDFL 92

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 56.9 bits (137), Expect = 7e-09
 Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 6/89 (6%)

Query: 509 KNKLGEGGFGPVYKGV---LIEGQE---IAAKRLSKSSGQGMEEFENEVLLIAKLQHRNL 562
           K +LGEG FG V+      L+  Q+   +A K L ++S    ++F+ E  L+  LQH+++
Sbjct: 10  KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHI 69

Query: 563 VKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           V+  G CT+    ++++EY+ +  LN F+
Sbjct: 70  VRFYGVCTEGRPLLMVFEYMRHGDLNRFL 98

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|214680 smart00473, PAN_AP, divergent subfamily of APPLE domains

 Score = 52.2 bits (125), Expect = 8e-09
 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 6/81 (7%)

Query: 340 EHGDGFLKRESVKLPDTRFSLVDNKISLLECKELCSK-NCSCTAYANADVRGGGSGCLLW 398
           +  D F++  + KLP     ++    SL EC   C   NCSC ++       G  GCLLW
Sbjct: 1   KSDDCFVRLPNTKLPGFSRIVISV-ASLEECASKCLNSNCSCRSFTY---NNGTKGCLLW 56

Query: 399 -FHDLIDMKELSESGQDLFVR 418
               L D +     G DL+ +
Sbjct: 57  SESSLGDARLFPSGGVDLYEK 77

Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions. Length = 78

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 56.5 bits (137), Expect = 1e-08
 Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 2/93 (2%)

Query: 500 ANATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQ 558
            +  E + +  K+GEG  G VYK      G+E+A K++ +   Q  E   NE+L++   +
Sbjct: 15  GDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKM-RLRKQNKELIINEILIMKDCK 73

Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           H N+V         DE  ++ EY+   SL D I
Sbjct: 74  HPNIVDYYDSYLVGDELWVVMEYMDGGSLTDII 106

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 55.4 bits (133), Expect = 3e-08
 Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 6/87 (6%)

Query: 511 KLGEGGFGPVYKGVLI-----EGQEIAAKRLSK-SSGQGMEEFENEVLLIAKLQHRNLVK 564
           +LGE  FG +YKG L        Q +A K L   ++ Q   EF+ E  L+A+L H N+V 
Sbjct: 12  ELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVC 71

Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G  TQ     +++EYL    L++F+
Sbjct: 72  LLGVVTQEQPVCMLFEYLNQGDLHEFL 98

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 54.8 bits (132), Expect = 4e-08
 Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 7/87 (8%)

Query: 512 LGEGGFGPV----YKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLI 566
           LG+G FG V    Y  +    G+ +A K+L  S+ + + +FE E+ ++  LQH N+VK  
Sbjct: 12  LGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYK 71

Query: 567 GCCTQRDER--MLIYEYLPNKSLNDFI 591
           G C     R   L+ EYLP  SL D++
Sbjct: 72  GVCYSAGRRNLRLVMEYLPYGSLRDYL 98

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 53.8 bits (129), Expect = 5e-08
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 1/81 (1%)

Query: 512 LGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGME-EFENEVLLIAKLQHRNLVKLIGCCT 570
           LG+G FG V+KG L +   +A K   +   Q ++ +F +E  ++ +  H N+VKLIG CT
Sbjct: 3   LGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT 62

Query: 571 QRDERMLIYEYLPNKSLNDFI 591
           QR    ++ E +P      F+
Sbjct: 63  QRQPIYIVMELVPGGDFLSFL 83

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 54.1 bits (130), Expect = 6e-08
 Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 7/87 (8%)

Query: 512 LGEGGFGPVYKGV---LIEGQE---IAAKRLSK-SSGQGMEEFENEVLLIAKLQHRNLVK 564
           +G+G FG V++     L+  +    +A K L + +S     +F+ E  L+A+  H N+VK
Sbjct: 13  IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVK 72

Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G C       L++EY+    LN+F+
Sbjct: 73  LLGVCAVGKPMCLLFEYMAYGDLNEFL 99

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 52.1 bits (125), Expect = 2e-07
 Identities = 26/88 (29%), Positives = 46/88 (52%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E F+ + KLG G FG V++G+      +A K L        ++F+ EV  + +L+H++L+
Sbjct: 6   EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLI 65

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
            L   C+  +   +I E +   SL  F+
Sbjct: 66  SLFAVCSVGEPVYIITELMEKGSLLAFL 93

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 52.2 bits (125), Expect = 3e-07
 Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 14/91 (15%)

Query: 512 LGEGGFG--------PVYKGVLIEGQEIAAKRLSKSSGQGMEE-FENEVLLIAKLQHRNL 562
           LGEG FG        P   G    G+ +A K L +  GQ     ++ E+ ++  L H N+
Sbjct: 12  LGEGHFGKVSLYCYDPANDGT---GEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENI 68

Query: 563 VKLIGCCTQRDER--MLIYEYLPNKSLNDFI 591
           VK  GCC+++  +   LI EY+P  SL D++
Sbjct: 69  VKYKGCCSEQGGKGLQLIMEYVPLGSLRDYL 99

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 52.3 bits (125), Expect = 3e-07
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 6/89 (6%)

Query: 509 KNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNL 562
           K +LGEG FG V+           +   +A K L   +    ++F+ E  L+  LQH ++
Sbjct: 10  KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 69

Query: 563 VKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           VK  G C   D  ++++EY+ +  LN F+
Sbjct: 70  VKFYGVCGDGDPLIMVFEYMKHGDLNKFL 98

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 51.7 bits (125), Expect = 3e-07
 Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 8/110 (7%)

Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEI-AAKR--LSKSSGQGMEEFENEVLLIAKLQHRN 561
            +    ++G+G FG VY        ++   K   LS  S +  E+  NEV ++ KL H N
Sbjct: 1   KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPN 60

Query: 562 LVKLIGCCTQRDERMLIYEYLPNKSLNDFI-----FGFLYTEHFFWSFFF 606
           ++K      ++ +  ++ EY     L+  I      G  + E     +F 
Sbjct: 61  IIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFV 110

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 51.6 bits (124), Expect = 4e-07
 Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 5/85 (5%)

Query: 512 LGEGGFGPVYKGVL-IEGQE---IAAKRL-SKSSGQGMEEFENEVLLIAKLQHRNLVKLI 566
           +G G FG V +G L + G++   +A K L + SS +   +F  E  ++ +  H N+++L 
Sbjct: 12  IGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLE 71

Query: 567 GCCTQRDERMLIYEYLPNKSLNDFI 591
           G  T+    M+I EY+ N SL+ F+
Sbjct: 72  GVVTKSRPVMIITEYMENGSLDKFL 96

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 51.3 bits (123), Expect = 5e-07
 Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%)

Query: 512 LGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ 571
           LG G FG V+ G      ++A K + + +    ++F  E  ++ KL H NLV+L G CT+
Sbjct: 12  LGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTK 70

Query: 572 RDERMLIYEYLPNKSLNDFI 591
           +    ++ EY+ N  L +++
Sbjct: 71  QRPIFIVTEYMANGCLLNYL 90

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 52.1 bits (123), Expect = 5e-07
 Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 6/91 (6%)

Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSK---SSGQGMEEFENEVLLIAKLQH-R 560
           ++    KLGEG FG VY       + +A K L+K   S  + +E F  E+ ++A L H  
Sbjct: 1   SYRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58

Query: 561 NLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           N+VKL           L+ EY+   SL D +
Sbjct: 59  NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLL 89

Length = 384

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 52.2 bits (125), Expect = 8e-07
 Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 19/170 (11%)

Query: 430 KKPKKKKKVAIVITSVLLVTGVILLGGFVYLWKRRHRKQGKTDGSSKLDYNDRGNREEEM 489
           K+ +K       IT  L    V+ L  F +++ R             L+     N +   
Sbjct: 620 KRVRKTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNN---------LELKRVENEDGTW 670

Query: 490 ELPIFDW-----MAIANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQG 543
           EL  FD      + I +   +  ++N +  G  G  YKG  I+ G +   K ++  +   
Sbjct: 671 ELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIP 730

Query: 544 MEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFG 593
                +E+  + KLQH N+VKLIG C       LI+EY+  K+L++ +  
Sbjct: 731 ----SSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN 776

Length = 968

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 50.5 bits (121), Expect = 8e-07
 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 1/83 (1%)

Query: 509 KNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGC 568
             KLG G FG V++G+      +A K L K      ++F  E  ++ KL+H  L++L   
Sbjct: 11  LRKLGAGQFGEVWEGLWNNTTPVAVKTL-KPGTMDPKDFLAEAQIMKKLRHPKLIQLYAV 69

Query: 569 CTQRDERMLIYEYLPNKSLNDFI 591
           CT  +   ++ E +   SL +++
Sbjct: 70  CTLEEPIYIVTELMKYGSLLEYL 92

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 50.8 bits (122), Expect = 9e-07
 Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 18/101 (17%)

Query: 509 KNKLGEGGFGPVY--KGVLIEGQEIAAKRLSKSSGQ----------------GMEEFENE 550
             KLGEG FG V+  +   ++     A   + ++                    E+F  E
Sbjct: 10  VEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKE 69

Query: 551 VLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           V ++++L   N+ +L+G CT      +I EY+ N  LN F+
Sbjct: 70  VKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFL 110

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 49.9 bits (119), Expect = 1e-06
 Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 511 KLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCT 570
           KLG G FG V+ G      ++A K L K      E F  E  L+ +LQH  LV+L    T
Sbjct: 13  KLGAGQFGEVWMGYYNGHTKVAIKSL-KQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT 71

Query: 571 QRDERMLIYEYLPNKSLNDFI 591
           Q +   +I EY+ N SL DF+
Sbjct: 72  Q-EPIYIITEYMENGSLVDFL 91

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 50.2 bits (120), Expect = 1e-06
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 8/88 (9%)

Query: 512 LGEGGFGPVYKGVLI-------EGQEIAAKRLSK-SSGQGMEEFENEVLLIAKLQHRNLV 563
           LG G FG VY+G              +A K L K ++ Q  +EF  E  L++   H N+V
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           KL+G C   + + +I E +    L  ++
Sbjct: 63  KLLGVCLLNEPQYIIMELMEGGDLLSYL 90

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 49.7 bits (119), Expect = 1e-06
 Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 10/84 (11%)

Query: 512 LGEGGFGPVYKGV-LIEGQEIAAKRLS-----KSSGQGMEEFENEVLLIAKLQHRNLVKL 565
           LG G FG VY+G+ L +G   A K +S     ++  + +++ E E+ L++KLQH N+V+ 
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67

Query: 566 IGCCTQRDERML-IY-EYLPNKSL 587
           +G  T+R+E  L I+ E +P  SL
Sbjct: 68  LG--TEREEDNLYIFLELVPGGSL 89

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 49.9 bits (119), Expect = 1e-06
 Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 6/91 (6%)

Query: 510 NKLGEGGFGPVYKGVLIEGQEIAAKRLS------KSSGQGMEEFENEVLLIAKLQHRNLV 563
             LG+G +G VY G+  +GQ IA K++        ++ +  E+ + EV L+  L+H N+V
Sbjct: 6   EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIV 65

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFIFGF 594
           + +G C   +   +  E++P  S++  +  F
Sbjct: 66  QYLGTCLDDNTISIFMEFVPGGSISSILNRF 96

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 49.3 bits (117), Expect = 2e-06
 Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 1/81 (1%)

Query: 511 KLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCT 570
           KLG G FG V+ G      ++A K L K     ++ F  E  L+  LQH  LV+L    T
Sbjct: 13  KLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 71

Query: 571 QRDERMLIYEYLPNKSLNDFI 591
           + +   +I EY+   SL DF+
Sbjct: 72  KEEPIYIITEYMAKGSLLDFL 92

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 49.4 bits (118), Expect = 2e-06
 Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 6/86 (6%)

Query: 512 LGEGGFGPVYKGVLIE-GQEIAAKR-----LSKSSGQGMEEFENEVLLIAKLQHRNLVKL 565
           LG+G FG VY    ++ G+E+A K+      S  + + +   E E+ L+  LQH  +V+ 
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQY 69

Query: 566 IGCCTQRDERMLIYEYLPNKSLNDFI 591
            GC    +   +  EY+P  S+ D +
Sbjct: 70  YGCLRDDETLSIFMEYMPGGSVKDQL 95

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 49.5 bits (118), Expect = 2e-06
 Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 497 MAIANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIA 555
           +++ +  + ++   K+G+G  G VY  + +  GQE+A K+++       E   NE+L++ 
Sbjct: 12  VSVGDPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMR 71

Query: 556 KLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           + +H N+V  +      DE  ++ EYL   SL D +
Sbjct: 72  ENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV 107

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 48.9 bits (116), Expect = 3e-06
 Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 8/86 (9%)

Query: 512 LGEGGFGPVYKGVLIE-GQEIAAKRL-----SKSSGQGMEEFENEVLLIAKLQHRNLVKL 565
           LG+G FG VY    ++ G+E+AAK++     S  + + +   E E+ L+  LQH  +V+ 
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQY 69

Query: 566 IGCCTQRDERML--IYEYLPNKSLND 589
            GC   R E+ L    EY+P  S+ D
Sbjct: 70  YGCLRDRAEKTLTIFMEYMPGGSVKD 95

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 48.8 bits (116), Expect = 3e-06
 Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 16/99 (16%)

Query: 509 KNKLGEGGFGPVY----KGVL---------IEGQE--IAAKRL-SKSSGQGMEEFENEVL 552
           K KLGEG FG V+    +G+           +GQ   +A K L +  +     +F  E+ 
Sbjct: 10  KEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIK 69

Query: 553 LIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           ++++L++ N+++L+G C   D   +I EY+ N  LN F+
Sbjct: 70  IMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFL 108

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 48.9 bits (116), Expect = 3e-06
 Identities = 30/86 (34%), Positives = 53/86 (61%), Gaps = 7/86 (8%)

Query: 512 LGEGGFGPVYKGVLI-EGQEI----AAKRLSKSSG-QGMEEFENEVLLIAKLQHRNLVKL 565
           LG G FG VYKG+ + EG+ +    A K L++++G +   EF +E L++A + H +LV+L
Sbjct: 15  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 74

Query: 566 IGCCTQRDERMLIYEYLPNKSLNDFI 591
           +G C     + L+ + +P+  L D++
Sbjct: 75  LGVCLSPTIQ-LVTQLMPHGCLLDYV 99

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 48.7 bits (116), Expect = 3e-06
 Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 1/90 (1%)

Query: 503 TENFSDKNKLGEGGFGPVYKGVLIEGQ-EIAAKRLSKSSGQGMEEFENEVLLIAKLQHRN 561
            +   ++  LG+G +G VY    +  Q  IA K + +   + ++    E+ L + L+HRN
Sbjct: 7   YDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRN 66

Query: 562 LVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +V+ +G  ++     +  E +P  SL+  +
Sbjct: 67  IVQYLGSDSENGFFKIFMEQVPGGSLSALL 96

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 48.7 bits (116), Expect = 4e-06
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 12/93 (12%)

Query: 512 LGEGGFGPVYKGVLIEG----QEIAAK--RLSKSSGQGMEEFENEVLLIAKLQHRNLVKL 565
           LGEG FG V +G L +      ++A K  +L   +   +EEF +E   +    H N++KL
Sbjct: 7   LGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKL 66

Query: 566 IGCCTQRDER------MLIYEYLPNKSLNDFIF 592
           IG C +          M+I  ++ +  L+ F+ 
Sbjct: 67  IGVCFEASSLQKIPKPMVILPFMKHGDLHSFLL 99

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 48.6 bits (115), Expect = 4e-06
 Identities = 28/107 (26%), Positives = 57/107 (53%), Gaps = 1/107 (0%)

Query: 486 EEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGM 544
           +EE+   +   ++I +  + ++   K+G+G  G V+  + +  GQE+A K+++       
Sbjct: 1   DEEIMEKLRTIVSIGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKK 60

Query: 545 EEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           E   NE+L++ +L++ N+V  +      DE  ++ EYL   SL D +
Sbjct: 61  ELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVV 107

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 47.5 bits (113), Expect = 7e-06
 Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 6/107 (5%)

Query: 505 NFSDKNKLGEGGFGPVYKGVL-IEGQEIAAKR--LSKSSGQGMEEFENEVLLIAKLQHRN 561
           +F   NK+G+G FG V+K V   + +  A K+  LSK + +  EE  +E  ++AKL    
Sbjct: 1   DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY 60

Query: 562 LVKLIGCCTQRDERMLIYEYLPNKSLNDFI---FGFLYTEHFFWSFF 605
           +++       + +  ++ EY  N  L+  +    G    E   W FF
Sbjct: 61  IIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFF 107

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 46.9 bits (112), Expect = 1e-05
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAA-KRLSKSSGQGMEEFENEVLLIAKLQHRNL 562
           E++    ++G G +G VYK   I   E+ A K +    G   E  + E+ ++ + +H N+
Sbjct: 3   EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNI 62

Query: 563 VKLIGCCTQRDERMLIYEYLPNKSLND 589
           V   G   +RD+  ++ EY    SL D
Sbjct: 63  VAYFGSYLRRDKLWIVMEYCGGGSLQD 89

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 46.9 bits (111), Expect = 1e-05
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 12/105 (11%)

Query: 492 PIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEG---QEIAAKRLSKSSGQG-MEEF 547
           P+ +W  I      F D   +GEG FG V K  + +     + A KR+ + + +    +F
Sbjct: 2   PVLEWNDI-----KFQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDF 54

Query: 548 ENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
             E+ ++ KL  H N++ L+G C  R    L  EY P+ +L DF+
Sbjct: 55  AGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 99

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 46.6 bits (110), Expect = 2e-05
 Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 1/90 (1%)

Query: 501 NATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSK-SSGQGMEEFENEVLLIAKLQH 559
           N  E+F    ++G G +G VYK   +   E+AA ++ K   G+     + E++++   +H
Sbjct: 6   NPQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKH 65

Query: 560 RNLVKLIGCCTQRDERMLIYEYLPNKSLND 589
            N+V   G   +RD+  +  E+    SL D
Sbjct: 66  SNIVAYFGSYLRRDKLWICMEFCGGGSLQD 95

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 46.7 bits (111), Expect = 2e-05
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 7/85 (8%)

Query: 504 ENFSDKNKLGEGGFGPVY----KGVLIEGQE--IAAKRLSKSSGQGME-EFENEVLLIAK 556
            N  +   LG G FG V+    KG+  EG E  +  K L K+  + ++ EF  E+ +  K
Sbjct: 5   SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRK 64

Query: 557 LQHRNLVKLIGCCTQRDERMLIYEY 581
           L H+N+V+L+G C + +   +I EY
Sbjct: 65  LSHKNVVRLLGLCREAEPHYMILEY 89

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 46.4 bits (110), Expect = 2e-05
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 1/81 (1%)

Query: 511 KLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCT 570
           +LG G FG V  G    GQ   A ++ K      +EF  E  ++ KL H  LV+L G CT
Sbjct: 11  ELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCT 69

Query: 571 QRDERMLIYEYLPNKSLNDFI 591
           ++    ++ EY+ N  L +++
Sbjct: 70  KQRPIYIVTEYMSNGCLLNYL 90

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 46.1 bits (109), Expect = 3e-05
 Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 18/101 (17%)

Query: 509 KNKLGEGGFGPVYKGVLIEGQE-----------------IAAKRL-SKSSGQGMEEFENE 550
           K KLGEG FG V+   ++  Q+                 +A K L   ++     +F  E
Sbjct: 10  KEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKE 69

Query: 551 VLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           V ++++L+  N+++L+G C   D   +I EY+ N  LN F+
Sbjct: 70  VKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFL 110

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 46.2 bits (109), Expect = 3e-05
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 4/80 (5%)

Query: 506 FSDKNKLGEGGFGPVYKGVLIEGQEIAA-KRLSKSSGQGMEEFEN---EVLLIAKLQHRN 561
           FSD  ++G G FG VY    +   E+ A K++S S  Q  E++++   EV  + KL+H N
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76

Query: 562 LVKLIGCCTQRDERMLIYEY 581
            ++  GC  +     L+ EY
Sbjct: 77  TIQYRGCYLREHTAWLVMEY 96

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 45.7 bits (108), Expect = 3e-05
 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 7/87 (8%)

Query: 512 LGEGGFGPVYKGVLIEGQ------EIAAKRLSKSSGQG-MEEFENEVLLIAKLQHRNLVK 564
           LGEG FG V K      +       +A K L +++    + +  +E  L+ ++ H +++K
Sbjct: 8   LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIK 67

Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L G C+Q    +LI EY    SL  F+
Sbjct: 68  LYGACSQDGPLLLIVEYAKYGSLRSFL 94

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 45.7 bits (109), Expect = 3e-05
 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 3/89 (3%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNL 562
           E F    KLGEG +G VYK +  E GQ +A K +     + ++E   E+ ++ +     +
Sbjct: 3   EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVV--PVEEDLQEIIKEISILKQCDSPYI 60

Query: 563 VKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           VK  G   +  +  ++ EY    S++D +
Sbjct: 61  VKYYGSYFKNTDLWIVMEYCGAGSVSDIM 89

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 45.9 bits (109), Expect = 3e-05
 Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 5/67 (7%)

Query: 509 KNKLGEGGFGPVYKGVLI--EGQEIA-AKRLSK--SSGQGMEEFENEVLLIAKLQHRNLV 563
              +GEG FG VY+GV +  E ++IA A +  K  +S    E+F  E  ++ +  H ++V
Sbjct: 11  GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIV 70

Query: 564 KLIGCCT 570
           KLIG  T
Sbjct: 71  KLIGVIT 77

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 45.5 bits (107), Expect = 4e-05
 Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 1/107 (0%)

Query: 486 EEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGM 544
           +EE+   +   +++ +  + ++   K+G+G  G VY  + I  GQE+A K+++       
Sbjct: 1   DEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKK 60

Query: 545 EEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           E   NE+L++ + ++ N+V  +      DE  ++ EYL   SL D +
Sbjct: 61  ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV 107

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 45.5 bits (108), Expect = 4e-05
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 3/81 (3%)

Query: 505 NFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQHRN 561
           +++   K+GEG +G VYKG     GQ +A K++  +S  +G+      E+ L+ +LQH N
Sbjct: 1   DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPN 60

Query: 562 LVKLIGCCTQRDERMLIYEYL 582
           +V L     Q     LI+E+L
Sbjct: 61  IVCLQDVLMQESRLYLIFEFL 81

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 45.0 bits (107), Expect = 5e-05
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 3/84 (3%)

Query: 510 NKLGEGGFGPVYKGV-LIEGQEIAAK--RLSKSSGQGMEEFENEVLLIAKLQHRNLVKLI 566
           NK+G G FG VY  V L  G+ +A K  R+  +  + ++E  +E+ ++  L+H NLVK  
Sbjct: 6   NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYY 65

Query: 567 GCCTQRDERMLIYEYLPNKSLNDF 590
           G    R++  +  EY    +L + 
Sbjct: 66  GVEVHREKVYIFMEYCSGGTLEEL 89

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 44.8 bits (106), Expect = 6e-05
 Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 8/88 (9%)

Query: 512 LGEGGFGPVYKGVLIE----GQ----EIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           LG+G F  ++KG+  E    G+    E+  K L KS     E F     ++++L H++LV
Sbjct: 3   LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
              G C   DE +++ EY+   SL+ ++
Sbjct: 63  LNYGVCVCGDESIMVQEYVKFGSLDTYL 90

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 44.9 bits (107), Expect = 6e-05
 Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 11/96 (11%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEF---ENEVLLIAKL 557
           ++F     +GEG F  V      E  +E A K L K     +   ++   E EVL     
Sbjct: 1   DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLN- 59

Query: 558 QHRNLVKLIGCCTQRDERML--IYEYLPNKSLNDFI 591
            H  ++KL    T +DE  L  + EY PN  L  +I
Sbjct: 60  GHPGIIKLY--YTFQDEENLYFVLEYAPNGELLQYI 93

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|238074 cd00129, PAN_APPLE, PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins

 Score = 41.5 bits (97), Expect = 6e-05
 Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 13/84 (15%)

Query: 339 CEHGDGFLKRESVKLPDTRFSLVDNKISLLECKELCSKN---CSCTAYANADVRGGGSGC 395
           C+     L + ++K+  T+ +  D      EC   C KN    SC A+  A  R     C
Sbjct: 5   CKSAGTTLIKIALKIKTTKANTAD------ECANRCEKNGLPFSCKAFVFAKARK---QC 55

Query: 396 LLW-FHDLIDMKELSESGQDLFVR 418
           L + F+ +  +++    G DL+  
Sbjct: 56  LWFPFNSMSGVRKEFSHGFDLYEN 79

Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. Length = 80

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 44.6 bits (105), Expect = 7e-05
 Identities = 24/85 (28%), Positives = 50/85 (58%), Gaps = 5/85 (5%)

Query: 512 LGEGGFGPVYKGVL-IEGQE---IAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLI 566
           +G G FG V++G+L + G++   +A K L    + +  ++F +E  ++ +  H N+++L 
Sbjct: 13  IGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLE 72

Query: 567 GCCTQRDERMLIYEYLPNKSLNDFI 591
           G  T+    M+I EY+ N +L+ ++
Sbjct: 73  GVVTKFKPAMIITEYMENGALDKYL 97

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 44.6 bits (105), Expect = 8e-05
 Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 7/86 (8%)

Query: 512 LGEGGFGPVYKGVLI-EGQEI----AAKRLSKSSG-QGMEEFENEVLLIAKLQHRNLVKL 565
           LG G FG V+KG+ I EG  I    A K +   SG Q  +E  + +L +  L H  +V+L
Sbjct: 15  LGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRL 74

Query: 566 IGCCTQRDERMLIYEYLPNKSLNDFI 591
           +G C       L+ +  P  SL D +
Sbjct: 75  LGICPG-ASLQLVTQLSPLGSLLDHV 99

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 44.7 bits (105), Expect = 9e-05
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 4/80 (5%)

Query: 506 FSDKNKLGEGGFGPVYKGVLIEGQEIAA-KRLSKSSGQGMEEFEN---EVLLIAKLQHRN 561
           F+D  ++G G FG VY    +   E+ A K++S S  Q  E++++   EV  + +++H N
Sbjct: 27  FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPN 86

Query: 562 LVKLIGCCTQRDERMLIYEY 581
            ++  GC  +     L+ EY
Sbjct: 87  SIEYKGCYLREHTAWLVMEY 106

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 44.0 bits (104), Expect = 9e-05
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 11/90 (12%)

Query: 512 LGEGGFGPVYKGVLIE---------GQEIAAKR-LSKSSGQGMEEFENEVLLIAKLQHRN 561
           LG+G F  +YKGVL           GQE++    +  S  +    F     L+++L H++
Sbjct: 3   LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKH 62

Query: 562 LVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           LVKL G C  RDE +++ EY+    L+ F+
Sbjct: 63  LVKLYGVCV-RDENIMVEEYVKFGPLDVFL 91

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 43.9 bits (103), Expect = 1e-04
 Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 8/94 (8%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRL-----SKSSGQGMEEFENEVLLIAKL 557
            N+     LG G FG VY     + G+E+A K++     S+ + + +   E E+ L+  L
Sbjct: 2   VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL 61

Query: 558 QHRNLVKLIGCCTQRDERML--IYEYLPNKSLND 589
           +H  +V+  GC    +E+ L    EY+P  S+ D
Sbjct: 62  RHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKD 95

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 44.0 bits (104), Expect = 1e-04
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)

Query: 511 KLGEGGFGPVYKGVLIEGQEIAA-KRLS-KSSGQGMEEFE-NEVLLIAKLQHRNLVKLIG 567
           K+GEG +G V+K    E  EI A KR+      +G+      E+ L+ +L+H+N+V+L  
Sbjct: 7   KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYD 66

Query: 568 CCTQRDERMLIYEY 581
                 +  L++EY
Sbjct: 67  VLHSDKKLTLVFEY 80

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 43.9 bits (103), Expect = 1e-04
 Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 1/107 (0%)

Query: 486 EEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLSKSSGQGM 544
           +EE+   +   +++ +  + ++   K+G+G  G VY  + +  GQE+A ++++       
Sbjct: 2   DEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK 61

Query: 545 EEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           E   NE+L++ + ++ N+V  +      DE  ++ EYL   SL D +
Sbjct: 62  ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV 108

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 43.6 bits (103), Expect = 1e-04
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNL 562
               +  K+GEG  G V        G+++A K++     Q  E   NEV+++   QH N+
Sbjct: 19  SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNI 78

Query: 563 VKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           V++       DE  ++ E+L   +L D +
Sbjct: 79  VEMYSSYLVGDELWVVMEFLEGGALTDIV 107

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 43.3 bits (103), Expect = 2e-04
 Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 6/85 (7%)

Query: 511 KLGEGGFGPVYKGVLIEGQEIAA-KRLSKSSGQGMEEFEN--EVLLIAKLQ-HRNLVKLI 566
           +LG+G FG VY     E  E+ A K++ K      EE  N  EV  + KL  H N+VKL 
Sbjct: 6   QLGDGTFGSVYLARNKETGELVAIKKMKKKF-YSWEECMNLREVKSLRKLNEHPNIVKLK 64

Query: 567 GCCTQRDERMLIYEYLPNKSLNDFI 591
               + DE   ++EY+   +L   +
Sbjct: 65  EVFRENDELYFVFEYM-EGNLYQLM 88

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 43.2 bits (102), Expect = 2e-04
 Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 1/92 (1%)

Query: 501 NATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQH 559
           N  + +    +LG+G FG VYK    E G   AAK +   S + +E+F  E+ ++++ +H
Sbjct: 2   NPNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKH 61

Query: 560 RNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
            N+V L       ++  ++ E+    +L+  +
Sbjct: 62  PNIVGLYEAYFYENKLWILIEFCDGGALDSIM 93

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 43.2 bits (103), Expect = 2e-04
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 13/85 (15%)

Query: 506 FSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFEN--------EVLLIAKL 557
           +    KLGEG +G VYK    +  EI A +  +     ++  E         E+ L+ +L
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIR-----LDNEEEGIPSTALREISLLKEL 55

Query: 558 QHRNLVKLIGCCTQRDERMLIYEYL 582
           +H N+VKL+       +  L++EY 
Sbjct: 56  KHPNIVKLLDVIHTERKLYLVFEYC 80

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 43.1 bits (101), Expect = 2e-04
 Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 5/93 (5%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAA--KRLSK-SSGQGMEEFENEVLLIAKL-Q 558
           E+   ++ +GEG FG V + ++  +G ++ A  K L + +S     +F  E+ ++ KL  
Sbjct: 2   EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGH 61

Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           H N++ L+G C  R    +  EY P  +L DF+
Sbjct: 62  HPNIINLLGACENRGYLYIAIEYAPYGNLLDFL 94

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 43.0 bits (102), Expect = 2e-04
 Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 7/102 (6%)

Query: 501 NATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QH 559
           + T  F     +GEG +G VYK    +  ++ A ++        EE + E  ++ K   H
Sbjct: 3   DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNH 62

Query: 560 RNLVKLIGCCTQR------DERMLIYEYLPNKSLNDFIFGFL 595
            N+    G   ++      D+  L+ E     S+ D + G  
Sbjct: 63  PNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLR 104

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 42.9 bits (101), Expect = 3e-04
 Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 1/81 (1%)

Query: 511 KLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCT 570
           +LG G FG V+ G      ++A K +++ +    E+F  E  ++ KL H  LV+L G CT
Sbjct: 11  ELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCT 69

Query: 571 QRDERMLIYEYLPNKSLNDFI 591
           Q+    ++ E++ N  L +++
Sbjct: 70  QQKPLYIVTEFMENGCLLNYL 90

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 42.8 bits (101), Expect = 3e-04
 Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 20/94 (21%)

Query: 512 LGEGGFGPVYKGVLI------EGQEIAAKRLSKSSGQGMEEFENEVL-LIAKL------- 557
           LGEG FG V K   +      E   +A K L        +  E ++  L++++       
Sbjct: 20  LGEGAFGQVVKAEAVGLDNPNETSTVAVKMLK------DDATEKDLSDLVSEMEMMKMIG 73

Query: 558 QHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +H+N++ L+G CTQ     ++ EY  + +L DF+
Sbjct: 74  KHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFL 107

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 43.0 bits (101), Expect = 3e-04
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 10/89 (11%)

Query: 512 LGEGGFGPVY------KGVLIEGQEIAAKRLS-KSSGQGMEEFENEVLLIAKLQHRNLVK 564
           LGEG FG V       +G    G+++A K L  +S G  + + + E+ ++  L H N+VK
Sbjct: 12  LGEGHFGKVELCRYDPEGDNT-GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK 70

Query: 565 LIGCCTQRDER--MLIYEYLPNKSLNDFI 591
             G CT+       LI E+LP+ SL +++
Sbjct: 71  YKGICTEDGGNGIKLIMEFLPSGSLKEYL 99

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 42.9 bits (101), Expect = 3e-04
 Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 10/86 (11%)

Query: 512 LGEGGFGPVYKGV-LIEGQEIAAKRLSKSSGQG---------MEEFENEVLLIAKLQHRN 561
           +G G FG VY G+    G+ +A K++   S            ++    E+ L+ +LQH N
Sbjct: 8   IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67

Query: 562 LVKLIGCCTQRDERMLIYEYLPNKSL 587
           +V+ +G     D   +  EY+P  S+
Sbjct: 68  IVQYLGSSLDADHLNIFLEYVPGGSV 93

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 43.0 bits (101), Expect = 3e-04
 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 20/102 (19%)

Query: 509 KNKLGEGGFGPVYKGVLIEGQE------------------IAAKRL-SKSSGQGMEEFEN 549
           K KLGEG FG V+     EG E                  +A K L   ++     +F  
Sbjct: 10  KEKLGEGQFGEVHL-CEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLK 68

Query: 550 EVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           E+ ++++L+  N+++L+  C   D   +I EY+ N  LN F+
Sbjct: 69  EIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFL 110

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 42.3 bits (99), Expect = 4e-04
 Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 501 NATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSK-SSGQGMEEFENEVLLIAKLQH 559
           N   ++    ++G G +G VYK   +   E+AA ++ K   G      + E+ ++ + +H
Sbjct: 6   NPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKH 65

Query: 560 RNLVKLIGCCTQRDERMLIYEYLPNKSLND 589
            N+V   G    R++  +  EY    SL D
Sbjct: 66  CNIVAYFGSYLSREKLWICMEYCGGGSLQD 95

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 42.4 bits (100), Expect = 4e-04
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 6/84 (7%)

Query: 511 KLGEGGFGPVYKG----VLIEGQEIAAKRLSKSSGQG-MEEFENEVLLIAKLQHRNLVKL 565
           KLG+G FG V +G       +   +A K L        M++F  E  ++  L H NL++L
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRL 61

Query: 566 IGCCTQRDERMLIYEYLPNKSLND 589
            G        M++ E  P  SL D
Sbjct: 62  YGVVLT-HPLMMVTELAPLGSLLD 84

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 42.3 bits (99), Expect = 4e-04
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 11/92 (11%)

Query: 512 LGEGGFGPVYKGVLIEGQEI---AAK--RLSKSSGQGMEEFENEVLLIAKLQHRNLVKLI 566
           LGEG FG V +G L +   I   A K  +++  +   ME+F +E + + +  H N+++LI
Sbjct: 7   LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66

Query: 567 GCCTQRDER------MLIYEYLPNKSLNDFIF 592
           G C Q  E       ++I  ++ +  L+ F+ 
Sbjct: 67  GVCLQTVESEGYPSPVVILPFMKHGDLHSFLL 98

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 42.3 bits (100), Expect = 4e-04
 Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 14/94 (14%)

Query: 511 KLGEGGFGPVYKGVLIE-GQEIAAKR-LSKSSGQGME-EFENEVLLIAKLQHRNLVKLIG 567
           KLGEG FG VYK   I+ G+ +A K+ L  +   G       E+ ++ KL+H N+V LI 
Sbjct: 15  KLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLID 74

Query: 568 CCTQRDERMLIYEYLPN--KSLNDFIFGFLYTEH 599
                    +  E      +          Y +H
Sbjct: 75  ---------MAVERPDKSKRKRGSVYMVTPYMDH 99

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 42.1 bits (99), Expect = 4e-04
 Identities = 27/86 (31%), Positives = 50/86 (58%), Gaps = 6/86 (6%)

Query: 512 LGEGGFGPVYKGVLI--EGQEI--AAKRLSK-SSGQGMEEFENEVLLIAKLQHRNLVKLI 566
           +G+G FG VY G LI  +GQ+I  A K L++ +  + +E+F  E +++    H N++ L+
Sbjct: 3   IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLL 62

Query: 567 GCCTQRD-ERMLIYEYLPNKSLNDFI 591
           G C   +   +++  Y+ +  L +FI
Sbjct: 63  GICLPSEGSPLVVLPYMKHGDLRNFI 88

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 42.1 bits (100), Expect = 5e-04
 Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 9/82 (10%)

Query: 510 NKLGEGGFGPVYKGV-LIEGQEIAAKRLSKSSGQGMEEFE----NEVLLIAKLQHRNLVK 564
            ++GEG +G VYK      G+ +A K++   + +  E F      E+ L+ KL+H N+V+
Sbjct: 5   AQIGEGTYGQVYKARNKKTGELVALKKIRMENEK--EGFPITAIREIKLLQKLRHPNIVR 62

Query: 565 LIGCCTQRDER--MLIYEYLPN 584
           L    T + +    +++EY+ +
Sbjct: 63  LKEIVTSKGKGSIYMVFEYMDH 84

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 42.0 bits (99), Expect = 5e-04
 Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 3/89 (3%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEE--FENEVLLIAKLQHR 560
           E + +   +GEG +G V K    E GQ +A K+  +S    M +     E+ ++ +L+H 
Sbjct: 1   EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHE 60

Query: 561 NLVKLIGCCTQRDERMLIYEYLPNKSLND 589
           NLV LI    ++    L++E++ +  L+D
Sbjct: 61  NLVNLIEVFRRKKRLYLVFEFVDHTVLDD 89

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 41.7 bits (98), Expect = 6e-04
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 4/80 (5%)

Query: 506 FSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLSKSSGQGMEEFEN---EVLLIAKLQHRN 561
           F+D  ++G G FG VY    +   + +A K++S S  Q  E++++   EV  + +L+H N
Sbjct: 17  FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPN 76

Query: 562 LVKLIGCCTQRDERMLIYEY 581
            ++  GC  +     L+ EY
Sbjct: 77  TIEYKGCYLREHTAWLVMEY 96

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 41.6 bits (97), Expect = 6e-04
 Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 2/83 (2%)

Query: 511 KLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCT 570
           KLG+G FG V+ G       +A K L K      E F  E  ++ KL+H  LV+L    +
Sbjct: 13  KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 71

Query: 571 QRDERMLIYEYLPNKSLNDFIFG 593
           + +   ++ EY+   SL DF+ G
Sbjct: 72  E-EPIYIVTEYMSKGSLLDFLKG 93

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 41.7 bits (98), Expect = 7e-04
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAA-KRLSKSSGQGMEEFE-NEVLLIAKLQHRNL 562
           NF    KLGEG +  VYKG      EI A K +   + +G       E+ L+ +L+H N+
Sbjct: 1   NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENI 60

Query: 563 VKLIGCCTQRDERMLIYEYLPN 584
           V+L       ++ ML++EY+  
Sbjct: 61  VRLHDVIHTENKLMLVFEYMDK 82

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 41.2 bits (96), Expect = 0.001
 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 8/86 (9%)

Query: 512 LGEGGFGPVYKGVLIE-GQEIAAKRL-----SKSSGQGMEEFENEVLLIAKLQHRNLVKL 565
           LG+G FG VY     + G+E+A K++     S  + + +   E E+ L+  L H  +V+ 
Sbjct: 10  LGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQY 69

Query: 566 IGCCTQRDERML--IYEYLPNKSLND 589
            GC     ER L    E++P  S+ D
Sbjct: 70  YGCLRDPMERTLSIFMEHMPGGSIKD 95

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 41.2 bits (96), Expect = 0.001
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAA-KRLSKSSGQGMEEFEN---EVLLIAKLQH 559
           E F   +++G G FG VY        E+ A K++S S  Q  E++++   EV  + +L+H
Sbjct: 21  EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKH 80

Query: 560 RNLVKLIGCCTQRDERMLIYEY 581
            N ++  GC  +     L+ EY
Sbjct: 81  PNTIEYKGCYLKEHTAWLVMEY 102

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 40.8 bits (95), Expect = 0.001
 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 2/81 (2%)

Query: 511 KLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCT 570
           KLG G FG V+     +  ++A K + K     +E F  E  ++  LQH  LVKL    T
Sbjct: 13  KLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 71

Query: 571 QRDERMLIYEYLPNKSLNDFI 591
            ++   +I E++   SL DF+
Sbjct: 72  -KEPIYIITEFMAKGSLLDFL 91

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 40.4 bits (94), Expect = 0.001
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)

Query: 511 KLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCT 570
           KLG G FG V+ G      ++A K L K      E F  E  ++ KL+H  LV+L    +
Sbjct: 13  KLGNGQFGEVWMGTWNGNTKVAVKTL-KPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS 71

Query: 571 QRDERMLIYEYLPNKSLNDFI 591
           +     ++ EY+   SL DF+
Sbjct: 72  EE-PIYIVTEYMSKGSLLDFL 91

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 40.6 bits (95), Expect = 0.002
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 4/90 (4%)

Query: 505 NFSDKNKLGEGGFGPVYKGV-LIEGQEIAAK--RLSKSSGQGMEEFENEVLLIAKLQHRN 561
           NF    K+GEG +G VYK    + G+ +A K  RL   +         E+ L+ +L H N
Sbjct: 1   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 60

Query: 562 LVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +VKL+      ++  L++E+L ++ L  F+
Sbjct: 61  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM 89

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 40.4 bits (94), Expect = 0.002
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)

Query: 511 KLGEGGFGPV-YKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
           K+GEG  G V    V   G+ +A K++     Q  E   NEV+++   QH N+V++    
Sbjct: 27  KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86

Query: 570 TQRDERMLIYEYLPNKSLNDFI 591
              DE  ++ E+L   +L D +
Sbjct: 87  LVGDELWVVMEFLEGGALTDIV 108

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 40.1 bits (94), Expect = 0.002
 Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 22/116 (18%)

Query: 505 NFSDKNKLGEGGFGPVYK-GVLIEGQEIAAKR--LSKSSGQGMEEFENEVLLIAKLQHRN 561
           +F    KLG+G +G VYK   L + Q  A K   L   S +  E+  NE+ ++A + H N
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60

Query: 562 LVK-----LIGC--CTQRDERMLIYEYLPNKSLNDFI-----FGFLYTEHFFWSFF 605
           ++      L G   C        + EY P   L+  I        L  E   W  F
Sbjct: 61  IISYKEAFLDGNKLCI-------VMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIF 109

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 40.1 bits (93), Expect = 0.002
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 7/87 (8%)

Query: 512 LGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCT 570
           +G G +G VYKG  ++  ++AA ++   +G   EE + E+ ++ K   HRN+    G   
Sbjct: 14  VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 73

Query: 571 QR------DERMLIYEYLPNKSLNDFI 591
           ++      D+  L+ E+    S+ D I
Sbjct: 74  KKNPPGMDDQLWLVMEFCGAGSVTDLI 100

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 39.9 bits (93), Expect = 0.002
 Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 5/85 (5%)

Query: 512 LGEGGFGPVYKGVL-IEGQE---IAAKRL-SKSSGQGMEEFENEVLLIAKLQHRNLVKLI 566
           +G G FG V +G L + G+    +A K L S  + +   +F +E  ++ +  H N++ L 
Sbjct: 12  IGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLE 71

Query: 567 GCCTQRDERMLIYEYLPNKSLNDFI 591
           G  T+    M+I E++ N +L+ F+
Sbjct: 72  GVVTKSRPVMIITEFMENGALDSFL 96

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 40.0 bits (93), Expect = 0.003
 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)

Query: 511 KLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
           +LG+G FG VYK    E G   AAK +   S + +E++  E+ ++A   H  +VKL+G  
Sbjct: 19  ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAF 78

Query: 570 TQRDERMLIYEYLPNKSLN 588
               +  ++ E+ P  +++
Sbjct: 79  YWDGKLWIMIEFCPGGAVD 97

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 39.6 bits (93), Expect = 0.003
 Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 3/75 (4%)

Query: 511 KLGEGGFGPVYKGV-LIEGQEIAAKRLSKSSGQGMEEFEN--EVLLIAKLQHRNLVKLIG 567
           K+GEG +G VYK    + G+ +A K++               E+ L+ +L H N++KL+ 
Sbjct: 6   KIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLD 65

Query: 568 CCTQRDERMLIYEYL 582
               + +  L++E++
Sbjct: 66  VFRHKGDLYLVFEFM 80

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 39.6 bits (92), Expect = 0.003
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 4/84 (4%)

Query: 502 ATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLSKSSGQGMEEFE--NEVLLIAKLQ 558
           A  ++ +  KLGEG +  VYKG+  I GQ +A K +S  + +G+  F    E  L+  L+
Sbjct: 3   AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGV-PFTAIREASLLKGLK 61

Query: 559 HRNLVKLIGCCTQRDERMLIYEYL 582
           H N+V L      ++    ++EY+
Sbjct: 62  HANIVLLHDIIHTKETLTFVFEYM 85

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 39.5 bits (93), Expect = 0.003
 Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 6/80 (7%)

Query: 510 NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFEN-----EVLLIAKLQHRNLV 563
            KLGEG +  VYK    E G+ +A K++     +  ++  N     E+ L+ +L+H N++
Sbjct: 6   KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNII 65

Query: 564 KLIGCCTQRDERMLIYEYLP 583
            L+     +    L++E++ 
Sbjct: 66  GLLDVFGHKSNINLVFEFME 85

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 39.6 bits (92), Expect = 0.003
 Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 8/101 (7%)

Query: 497 MAIANATENFSDKNKLGEGGFGPVYKGVLI-EGQEI----AAKRLSK-SSGQGMEEFENE 550
           + I   TE F     LG G FG VYKG+ I EG+++    A K L + +S +  +E  +E
Sbjct: 1   LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 59

Query: 551 VLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
             ++A + + ++ +L+G C     + LI + +P   L D++
Sbjct: 60  AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV 99

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 38.9 bits (90), Expect = 0.004
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 5/85 (5%)

Query: 512 LGEGGFGPVYKGVLI-EGQEI-AAKRLSK--SSGQGMEEFENEVLLIAKL-QHRNLVKLI 566
           +GEG FG V K  +  +G  + AA +  K  +S     +F  E+ ++ KL  H N++ L+
Sbjct: 3   IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 62

Query: 567 GCCTQRDERMLIYEYLPNKSLNDFI 591
           G C  R    L  EY P+ +L DF+
Sbjct: 63  GACEHRGYLYLAIEYAPHGNLLDFL 87

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	617
PF01453	114	B_lectin: D-mannose binding lectin; InterPro: IPR0	99.96
cd00028	116	B_lectin Bulb-type mannose-specific lectin. The do	99.94
PF00954	110	S_locus_glycop: S-locus glycoprotein family; Inter	99.93
smart00108	114	B_lectin Bulb-type mannose-specific lectin.	99.92
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.9
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.73
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.71
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.7
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.67
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.66
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.64
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.63
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.57
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.56
KOG3653	534	consensus Transforming growth factor beta/activin	99.54
PF08276	66	PAN_2: PAN-like domain; InterPro: IPR013227 PAN do	99.52
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.52
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.51
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.49
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.46
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.44
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.43
KOG0605	550	consensus NDR and related serine/threonine kinases	99.43
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.37
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.37
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.37
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.37
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.35
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.35
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.35
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.33
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.33
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.32
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.32
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.32
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.32
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.32
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.32
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.32
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.31
PHA02988	283	hypothetical protein; Provisional	99.31
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.3
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.3
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.3
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.3
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.29
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.29
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.29
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.29
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.29
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.29
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.28
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.28
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.28
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.27
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.27
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.27
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.27
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.27
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.26
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.26
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.26
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.26
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.25
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.25
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.25
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.25
cd00129	80	PAN_APPLE PAN/APPLE-like domain; present in N-term	99.24
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.24
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.24
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.24
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.24
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.24
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.24
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.24
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.24
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.24
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.24
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.24
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.24
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.23
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.23
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.23
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.23
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.23
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.23
KOG0198	313	consensus MEKK and related serine/threonine protei	99.23
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.23
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.23
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.22
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.22
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.22
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.22
cd01098	84	PAN_AP_plant Plant PAN/APPLE-like domain; present	99.22
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.22
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.21
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.21
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.21
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.21
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.21
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.21
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.2
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.2
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.2
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.2
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.2
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.2
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.2
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.2
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.2
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.2
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.2
PTZ00267	478	NIMA-related protein kinase; Provisional	99.2
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.19
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.19
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.19
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.19
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.19
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.19
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.19
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.19
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.19
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.19
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.19
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.19
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.18
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.18
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.18
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.18
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.18
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.18
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.18
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.17
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.17
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.17
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.17
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.17
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.17
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.17
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.17
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.17
KOG0586	596	consensus Serine/threonine protein kinase [General	99.16
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.16
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.16
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.16
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.16
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.16
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.15
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.15
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.15
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.15
KOG0610	459	consensus Putative serine/threonine protein kinase	99.15
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.15
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.15
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.15
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.15
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.15
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.15
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.15
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.15
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.15
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.15
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.15
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.15
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.14
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.14
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.14
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.14
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.14
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.14
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.14
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.14
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.14
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.14
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.14
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.14
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.14
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.13
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.13
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.13
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.13
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.13
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.13
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.13
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.13
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.13
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.13
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.13
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.12
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.12
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.12
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.12
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.12
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.12
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.12
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.12
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.11
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.11
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.11
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.11
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.11
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.11
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.11
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.11
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.11
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.11
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.11
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.11
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.11
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.11
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.11
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.11
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.1
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.1
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.1
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.1
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.1
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.1
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.1
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.1
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.1
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.1
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.1
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.1
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.09
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.09
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.09
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.09
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.09
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.09
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.08
PHA03212	391	serine/threonine kinase US3; Provisional	99.08
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.08
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.08
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.08
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.08
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.08
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.08
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.08
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.08
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.07
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.07
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.07
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.07
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.07
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.07
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.07
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.07
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.07
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.07
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.07
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.07
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.06
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.06
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.06
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.06
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.05
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.05
PTZ00283	496	serine/threonine protein kinase; Provisional	99.05
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.05
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.05
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.05
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.05
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.05
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.05
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.04
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.04
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.03
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.03
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.03
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.03
PRK09188	365	serine/threonine protein kinase; Provisional	99.03
KOG0589	426	consensus Serine/threonine protein kinase [General	99.03
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.02
PHA03211	461	serine/threonine kinase US3; Provisional	99.02
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.02
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.02
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.02
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.02
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.02
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.02
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.02
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.02
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.02
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.02
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.02
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.01
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.01
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.01
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.01
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.01
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.01
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	98.98
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.98
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	98.98
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.98
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	98.98
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	98.98
PHA03209	357	serine/threonine kinase US3; Provisional	98.97
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	98.97
PRK10345	210	hypothetical protein; Provisional	98.96
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	98.96
PLN00009	294	cyclin-dependent kinase A; Provisional	98.96
KOG0578	550	consensus p21-activated serine/threonine protein k	98.96
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	98.95
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.95
PTZ00036	440	glycogen synthase kinase; Provisional	98.95
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	98.95
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	98.94
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	98.93
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.93
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.93
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.92
PHA03207	392	serine/threonine kinase US3; Provisional	98.92
KOG0577	948	consensus Serine/threonine protein kinase [Signal	98.91
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.91
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.91
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.91
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.91
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	98.91
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.91
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.9
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	98.9
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.9
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.9
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	98.89
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	98.89
KOG0694	694	consensus Serine/threonine protein kinase [Signal	98.89
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	98.89
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.88
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.88
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	98.87
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	98.87
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	98.87
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	98.87
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.87
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.86
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.86
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	98.85
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.85
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.85
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.85
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.85
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.85
PTZ00284	467	protein kinase; Provisional	98.84
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	98.84
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.83
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.83
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	98.83
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.81
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.81
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.81
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	98.81
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.81
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	98.8
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.8
PHA03210	501	serine/threonine kinase US3; Provisional	98.8
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	98.78
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.77
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.77
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.77
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.77
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.77
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.77
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.76
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	98.76
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	98.76
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.75
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.73
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.72
KOG0596	677	consensus Dual specificity; serine/threonine and t	98.71
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.69
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.69
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	98.67
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.67
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	98.66
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.64
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.62
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.61
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.61
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	98.6
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.6
PRK14879	211	serine/threonine protein kinase; Provisional	98.6
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.57
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.56
KOG1152	772	consensus Signal transduction serine/threonine kin	98.54
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	98.54
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	98.52
KOG1167	418	consensus Serine/threonine protein kinase of the C	98.5
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	98.48
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	98.48
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	98.46
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	98.46
KOG0584	632	consensus Serine/threonine protein kinase [General	98.45
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	98.43
KOG1027	903	consensus Serine/threonine protein kinase and endo	98.41
KOG0690	516	consensus Serine/threonine protein kinase [Signal	98.4
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.38
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	98.38
PHA02882	294	putative serine/threonine kinase; Provisional	98.27
cd00028	116	B_lectin Bulb-type mannose-specific lectin. The do	98.21
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.21
smart00108	114	B_lectin Bulb-type mannose-specific lectin.	98.2
smart00090	237	RIO RIO-like kinase.	98.19
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.18
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	98.18
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	98.17
KOG0695	593	consensus Serine/threonine protein kinase [Signal	98.12
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	98.12
KOG1290	590	consensus Serine/threonine protein kinase [Signal	98.11
PRK12274	218	serine/threonine protein kinase; Provisional	98.1
smart00473	78	PAN_AP divergent subfamily of APPLE domains. Apple	98.08
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	98.04
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.02
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	97.98
KOG0696	683	consensus Serine/threonine protein kinase [Signal	97.97
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	97.92
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	97.91
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	97.83
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	97.82
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.8
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	97.8
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	97.72
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	97.67
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	97.62
PF01453	114	B_lectin: D-mannose binding lectin; InterPro: IPR0	97.6
COG0515	384	SPS1 Serine/threonine protein kinase [General func	97.58
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	97.54
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	97.46
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.33
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	97.15
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	96.83
cd01100	73	APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d	96.31
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	96.21
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	95.06
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	94.22
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	93.53
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	93.47
PF15102	146	TMEM154: TMEM154 protein family	93.16
PF08693	40	SKG6: Transmembrane alpha-helix domain; InterPro:	92.34
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	92.03
KOG3087	229	consensus Serine/threonine protein kinase [General	91.6
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	91.29
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	91.25
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	91.17
COG0661	517	AarF Predicted unusual protein kinase [General fun	91.12
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	89.45
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	89.44
cd00053	36	EGF Epidermal growth factor domain, found in epide	89.41
KOG0590	601	consensus Checkpoint kinase and related serine/thr	89.26
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	89.1
KOG1219	4289	consensus Uncharacterized conserved protein, conta	88.67
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	88.41
PF04478	154	Mid2: Mid2 like cell wall stress sensor; InterPro:	87.4
PLN00181	793	protein SPA1-RELATED; Provisional	87.32
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	86.19
PF00024	79	PAN_1: PAN domain This Prosite entry concerns appl	85.87
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	84.06
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	83.43
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	83.11
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	82.61
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	82.36
PRK10593	297	hypothetical protein; Provisional	82.1
KOG1235	538	consensus Predicted unusual protein kinase [Genera	81.56
KOG0590	601	consensus Checkpoint kinase and related serine/thr	81.32
KOG1243	690	consensus Protein kinase [General function predict	81.26
PRK09550	401	mtnK methylthioribose kinase; Reviewed	80.98

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Probab=99.96  E-value=7.9e-30  Score=221.66  Aligned_cols=110  Identities=47%  Similarity=0.805  Sum_probs=80.8

Q ss_pred             CCcEEEEcCCCCCCCCC--CceEEEeecCCceEEEecCCCcEEEEe-cCCCCC-CCceEEEecCCCEEEecCCCCCCCcc
Q 007129           64 NGTVIWVANRDAPLSDR--SGALNISSQGNATLVLLNSTNGIVWSS-NASRTA-RNPVAVLLESGNLVVKDGKDIDPDNF  139 (617)
Q Consensus        64 ~~tvVW~ANr~~pv~~~--~~~l~l~~~G~~~L~l~d~~~~~vWss-~~~~~~-~~~~a~Lld~GNlVl~~~~~~~~~~~  139 (617)
                      ++||||+|||+.|+...  ..+|.|+.||+  |+|.|..++++|++ ++.+.. .+..|.|+|+|||||+|.    .+.+
T Consensus         1 ~~tvvW~an~~~p~~~~s~~~~L~l~~dGn--Lvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~----~~~~   74 (114)
T PF01453_consen    1 PRTVVWVANRNSPLTSSSGNYTLILQSDGN--LVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDS----SGNV   74 (114)
T ss_dssp             ---------TTEEEEECETTEEEEEETTSE--EEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEET----TSEE
T ss_pred             CcccccccccccccccccccccceECCCCe--EEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEee----cceE
Confidence            47999999999999543  37899999999  99999999999999 554322 578999999999999995    4889


Q ss_pred             eEeecCCCcccccCCceeeeeeecCceeEEEEcccCCCCC
Q 007129          140 LWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPA  179 (617)
Q Consensus       140 lWqSFd~PtDTlLpgq~L~~~~~tg~~~~l~Sw~s~~d~s  179 (617)
                      |||||||||||+||||+|+.+..++.+..++||++.+|||
T Consensus        75 lW~Sf~~ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps  114 (114)
T PF01453_consen   75 LWQSFDYPTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS  114 (114)
T ss_dssp             EEESTTSSS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred             EEeecCCCccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence            9999999999999999999887777777899999999996

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>cd00028 B_lectin Bulb-type mannose-specific lectin

Probab=99.94  E-value=2.2e-26  Score=201.85  Aligned_cols=115  Identities=50%  Similarity=0.827  Sum_probs=101.4

Q ss_pred             CcccCCCEEEeCCCeEEEEeeCCCCCCCcEEEEEecccCCCcEEEEcCCCCCCCCCCceEEEeecCCceEEEecCCCcEE
Q 007129           25 QSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIV  104 (617)
Q Consensus        25 ~~l~~~~~lvS~~g~F~~GF~~~~~~~~~~lgIw~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~~~L~l~d~~~~~v  104 (617)
                      +.|.++++|+|+++.|++|||.+......+.+|||.+.+ +++||.|||+.| ....++|.|+.||+  |+|.|.+|.++
T Consensus         2 ~~l~~~~~l~s~~~~f~~G~~~~~~q~~dgnlv~~~~~~-~~~vW~snt~~~-~~~~~~l~l~~dGn--Lvl~~~~g~~v   77 (116)
T cd00028           2 NPLSSGQTLVSSGSLFELGFFKLIMQSRDYNLILYKGSS-RTVVWVANRDNP-SGSSCTLTLQSDGN--LVIYDGSGTVV   77 (116)
T ss_pred             cCcCCCCEEEeCCCcEEEecccCCCCCCeEEEEEEeCCC-CeEEEECCCCCC-CCCCEEEEEecCCC--eEEEcCCCcEE
Confidence            468899999999999999999987643489999998876 899999999998 44568899999999  99999999999


Q ss_pred             EEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecCCC
Q 007129          105 WSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYP  147 (617)
Q Consensus       105 Wss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~P  147 (617)
                      |+|++.++....+++|+|+|||||++.+    +.+||||||||
T Consensus        78 W~S~~~~~~~~~~~~L~ddGnlvl~~~~----~~~~W~Sf~~P  116 (116)
T cd00028          78 WSSNTTRVNGNYVLVLLDDGNLVLYDSD----GNFLWQSFDYP  116 (116)
T ss_pred             EEecccCCCCceEEEEeCCCCEEEECCC----CCEEEcCCCCC
Confidence            9999874356678999999999999964    78899999999

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation

Probab=99.93  E-value=9.7e-26  Score=195.55  Aligned_cols=110  Identities=44%  Similarity=0.957  Sum_probs=104.3

Q ss_pred             EeeCCCCCceeecccCCCCCCceEEEEEEcCCeEEEEEEecCCCceeEEEEccCCCceEEEEecCCCceeeeeccccccc
Q 007129          205 YRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVFYRFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLIL  284 (617)
Q Consensus       205 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~w~~~~~~w~~~~~~~~~~~  284 (617)
                      ||+|+|+|..|+++|+|.....+.+.|+.++.+.+++|.+.+.+.++|++|+++|++++|.|.+..+.|..+   |.+|.
T Consensus         1 wrsG~WnG~~f~g~p~~~~~~~~~~~fv~~~~e~~~t~~~~~~s~~~r~~ld~~G~l~~~~w~~~~~~W~~~---~~~p~   77 (110)
T PF00954_consen    1 WRSGPWNGQRFSGIPEMSSNSLYNYSFVSNNEEVYYTYSLSNSSVLSRLVLDSDGQLQRYIWNESTQSWSVF---WSAPK   77 (110)
T ss_pred             CCccccCCeEECCcccccccceeEEEEEECCCeEEEEEecCCCceEEEEEEeeeeEEEEEEEecCCCcEEEE---EEecc
Confidence            899999999999999999888899999999999999999999999999999999999999999999999999   99999


Q ss_pred             cccccccccCCceeeccCCCCcccccCCCCCcCC
Q 007129          285 DQCDNYALCGAYAVCNMNSNSAKCECLEGFVPKS  318 (617)
Q Consensus       285 ~~C~~~~~CG~~g~C~~~~~~~~C~C~~Gf~~~~  318 (617)
                      |+|++|+.||+||+|+.+..+ .|.|++||+|++
T Consensus        78 d~Cd~y~~CG~~g~C~~~~~~-~C~Cl~GF~P~n  110 (110)
T PF00954_consen   78 DQCDVYGFCGPNGICNSNNSP-KCSCLPGFEPKN  110 (110)
T ss_pred             cCCCCccccCCccEeCCCCCC-ceECCCCcCCCc
Confidence            999999999999999876655 899999999974

This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen

>smart00108 B_lectin Bulb-type mannose-specific lectin

Probab=99.92  E-value=7.7e-25  Score=191.49  Aligned_cols=113  Identities=51%  Similarity=0.846  Sum_probs=99.9

Q ss_pred             CcccCCCEEEeCCCeEEEEeeCCCCCCCcEEEEEecccCCCcEEEEcCCCCCCCCCCceEEEeecCCceEEEecCCCcEE
Q 007129           25 QSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIV  104 (617)
Q Consensus        25 ~~l~~~~~lvS~~g~F~~GF~~~~~~~~~~lgIw~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~~~L~l~d~~~~~v  104 (617)
                      +.|..+++|+|+++.|++|||.+.. ...+.+|||.+.+ +++||+|||+.|+.++ +.|.|+.||+  |+|+|.+|.++
T Consensus         2 ~~l~~~~~l~s~~~~f~~G~~~~~~-q~dgnlV~~~~~~-~~~vW~snt~~~~~~~-~~l~l~~dGn--Lvl~~~~g~~v   76 (114)
T smart00108        2 NTLSSGQTLVSGNSLFELGFFTLIM-QNDYNLILYKSSS-RTVVWVANRDNPVSDS-CTLTLQSDGN--LVLYDGDGRVV   76 (114)
T ss_pred             cccCCCCEEecCCCcEeeeccccCC-CCCEEEEEEECCC-CcEEEECCCCCCCCCC-EEEEEeCCCC--EEEEeCCCCEE
Confidence            5678899999999999999999865 4679999998876 8999999999998754 7899999999  99999999999


Q ss_pred             EEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecCC
Q 007129          105 WSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDY  146 (617)
Q Consensus       105 Wss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~  146 (617)
                      |+|++..+....+++|+|+|||||++..    +.+|||||||
T Consensus        77 W~S~t~~~~~~~~~~L~ddGnlvl~~~~----~~~~W~Sf~~  114 (114)
T smart00108       77 WSSNTTGANGNYVLVLLDDGNLVIYDSD----GNFLWQSFDY  114 (114)
T ss_pred             EEecccCCCCceEEEEeCCCCEEEECCC----CCEEeCCCCC
Confidence            9999863455678999999999999864    6799999997

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=1.1e-23  Score=220.69  Aligned_cols=120  Identities=47%  Similarity=0.792  Sum_probs=107.4

Q ss_pred             CCCccCHHHHHHhccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEE
Q 007129          490 ELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC  569 (617)
Q Consensus       490 ~~~~~~~~~l~~at~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~  569 (617)
                      ....|++.+++.||++|+..+.||+|+||.||+|.+.+++.||||++.....+...+|.+|+.++++++|||||+|+|||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            45679999999999999999999999999999999999999999998755433156799999999999999999999999


Q ss_pred             EeCC-eEEEEEeccCCCCHHHHHhcCCCCCcCCHHHHHhhhh
Q 007129          570 TQRD-ERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFFFSFEN  610 (617)
Q Consensus       570 ~~~~-~~~lv~E~~~~GsL~~~L~~~~~~~~l~w~~r~~i~~  610 (617)
                      .+.+ +++||||||++|+|.++|+..... .|+|.+|++||.
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~  181 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIAL  181 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHH
Confidence            9999 599999999999999999987544 799999996543

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.73  E-value=4.6e-18  Score=185.64  Aligned_cols=117  Identities=30%  Similarity=0.499  Sum_probs=96.9

Q ss_pred             HhccCCCCcceecccCceeEEEEEEcC------CcEEEEeecccCchh-hHHHHHHHHHHHHccCCCcccceEEEEEeCC
Q 007129          501 NATENFSDKNKLGEGGFGPVYKGVLIE------GQEIAAKRLSKSSGQ-GMEEFENEVLLIAKLQHRNLVKLIGCCTQRD  573 (617)
Q Consensus       501 ~at~~f~~~~~lG~G~fG~Vykg~l~~------g~~vAvK~l~~~~~~-~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~  573 (617)
                      ..+.+....++||+|.||+||+|+...      .+.||||.|+..... ...+|++|++++++++|||||+|+|+|.+++
T Consensus       483 i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~  562 (774)
T KOG1026|consen  483 IPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGD  562 (774)
T ss_pred             echhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC
Confidence            345666777899999999999998753      357999999866544 6789999999999999999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCC-----------CCcCCHHHHH----------------hhhhcccccCC
Q 007129          574 ERMLIYEYLPNKSLNDFIFGFLY-----------TEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       574 ~~~lv~E~~~~GsL~~~L~~~~~-----------~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      +.++|+|||.+|+|.+||+....           +..|+-.+-+                +..|+|||+||
T Consensus       563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRN  633 (774)
T KOG1026|consen  563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRN  633 (774)
T ss_pred             eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhh
Confidence            99999999999999999985422           1225555544                45589999998

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.71  E-value=3.1e-17  Score=165.19  Aligned_cols=114  Identities=25%  Similarity=0.393  Sum_probs=97.4

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      .+|...++||+|+|+.||+|.++. +..||||.+...  .....+.+..|+.++++++|||||+|+.++..++..+||||
T Consensus        10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME   89 (429)
T KOG0595|consen   10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME   89 (429)
T ss_pred             ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence            456667789999999999999976 889999999754  56677889999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||.+|+|.+||+..+.-             ..|..-+-.+||||||||-|
T Consensus        90 yC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQN  139 (429)
T KOG0595|consen   90 YCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQN  139 (429)
T ss_pred             eCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcce
Confidence            99999999999976421             11333355689999999988

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.70  E-value=2.1e-17  Score=177.32  Aligned_cols=111  Identities=26%  Similarity=0.380  Sum_probs=93.9

Q ss_pred             CCCCcceecccCceeEEEEEEcC----CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE----GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~----g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      .+...++||.|.||.|++|.++-    ...||||.|+.. +.....+|+.|+.+|++++||||++|.|+.....+.+||.
T Consensus       630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT  709 (996)
T KOG0196|consen  630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT  709 (996)
T ss_pred             heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence            34556899999999999999964    346999999865 3455679999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCcCCH----------------HHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      |||+||+|+.||+.+..  .+.|                -.-+.-.||||||||
T Consensus       710 EyMENGsLDsFLR~~DG--qftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARN  761 (996)
T KOG0196|consen  710 EYMENGSLDSFLRQNDG--QFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARN  761 (996)
T ss_pred             hhhhCCcHHHHHhhcCC--ceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhh
Confidence            99999999999987642  2333                344567899999998

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.67  E-value=3.1e-17  Score=171.02  Aligned_cols=111  Identities=28%  Similarity=0.440  Sum_probs=94.6

Q ss_pred             CCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCC
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNK  585 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~G  585 (617)
                      +...++||+|.||.|+.|.+.....||||.++.. ....++|.+|+.+|.+|+|+|||+|+|+|..+.+.+||+|||++|
T Consensus       208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G  286 (468)
T KOG0197|consen  208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG  286 (468)
T ss_pred             HHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence            3445689999999999999977779999999754 344578999999999999999999999999989999999999999


Q ss_pred             CHHHHHhcCCCC-----CcCCHH----------HHHhhhhcccccCC
Q 007129          586 SLNDFIFGFLYT-----EHFFWS----------FFFSFENLSLVDRN  617 (617)
Q Consensus       586 sL~~~L~~~~~~-----~~l~w~----------~r~~i~~~~~~~~n  617 (617)
                      +|.+||.+....     .++++.          .+.++|||||||||
T Consensus       287 sLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARN  333 (468)
T KOG0197|consen  287 SLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARN  333 (468)
T ss_pred             cHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhh
Confidence            999999973321     234443          67799999999999

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.66  E-value=1.9e-16  Score=167.70  Aligned_cols=113  Identities=26%  Similarity=0.346  Sum_probs=95.4

Q ss_pred             ccCCCCcceecccCceeEEEEEEcCC----cE-EEEeeccc---CchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCe
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIEG----QE-IAAKRLSK---SSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDE  574 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~g----~~-vAvK~l~~---~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~  574 (617)
                      .++....++||+|+||.||+|.+...    .. ||||..+.   .......+|++|+++|.+++|||||+++|++....+
T Consensus       156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P  235 (474)
T KOG0194|consen  156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP  235 (474)
T ss_pred             ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence            35555568999999999999999642    23 89999874   346677899999999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      .+||||+|++|+|.+||.....  .++..                +..++|||||||||
T Consensus       236 l~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARN  292 (474)
T KOG0194|consen  236 LMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARN  292 (474)
T ss_pred             cEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHH
Confidence            9999999999999999987642  24444                44589999999998

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.64  E-value=6.1e-16  Score=161.29  Aligned_cols=108  Identities=27%  Similarity=0.447  Sum_probs=91.3

Q ss_pred             cceecccCceeEEEEEEcCCcEEEEeecccCch--hhHHHHHHHHHHHHccCCCcccceEEEEEeCC-eEEEEEeccCCC
Q 007129          509 KNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSG--QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD-ERMLIYEYLPNK  585 (617)
Q Consensus       509 ~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~--~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~-~~~lv~E~~~~G  585 (617)
                      .+.||+|+||+||+|.+.....||||++.....  ...++|.+|+.+|.+++|||||+++|+|.+.. ..+||+|||++|
T Consensus        46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G  125 (362)
T KOG0192|consen   46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG  125 (362)
T ss_pred             hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence            456999999999999995444499999975432  22569999999999999999999999999987 789999999999


Q ss_pred             CHHHHHhcCCCCCcCCHHHHH----------------h-hhhcccccCC
Q 007129          586 SLNDFIFGFLYTEHFFWSFFF----------------S-FENLSLVDRN  617 (617)
Q Consensus       586 sL~~~L~~~~~~~~l~w~~r~----------------~-i~~~~~~~~n  617 (617)
                      +|.++|++. .+..|+|.+|+                . |||+|||++|
T Consensus       126 sL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~N  173 (362)
T KOG0192|consen  126 SLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDN  173 (362)
T ss_pred             cHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhh
Confidence            999999985 34568888765                4 8999999987

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.63  E-value=3.5e-16  Score=163.10  Aligned_cols=113  Identities=29%  Similarity=0.470  Sum_probs=96.6

Q ss_pred             CCCCcceecccCceeEEEEEEcCCcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      .+...++||+|.||.|..++...+..||||+++... ...+.+|.+|+++|.+++|||||+|+|+|..+++.++|+|||+
T Consensus       539 ~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmE  618 (807)
T KOG1094|consen  539 RLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYME  618 (807)
T ss_pred             heehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHh
Confidence            344568999999999999999888999999998654 3445899999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCC---------------cCCHHHHHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTE---------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~---------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|+|..||..+....               -+..-.-+++.|+|+++||
T Consensus       619 nGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rN  667 (807)
T KOG1094|consen  619 NGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRN  667 (807)
T ss_pred             cCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccc
Confidence            999999998763211               1233456789999999998

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.57  E-value=4.1e-15  Score=168.40  Aligned_cols=115  Identities=30%  Similarity=0.512  Sum_probs=97.4

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC--Cc----EEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE--GQ----EIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDER  575 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~--g~----~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~  575 (617)
                      ..+.+..+.||+|.||.||+|.+.+  +.    .||||.+++. +.+...+|.+|..+|+++.|||||+++|.|......
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~  770 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP  770 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence            3455667899999999999999965  32    4999999865 456678999999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCCC----CCcC----------------CHHHHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLY----TEHF----------------FWSFFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~----~~~l----------------~w~~r~~i~~~~~~~~n  617 (617)
                      +|++|||++|+|..||++.+.    ...|                ....+.+.+|+||||||
T Consensus       771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRN  832 (1025)
T KOG1095|consen  771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARN  832 (1025)
T ss_pred             EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhh
Confidence            999999999999999998732    1222                34478899999999999

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.56  E-value=1.2e-15  Score=159.61  Aligned_cols=112  Identities=29%  Similarity=0.470  Sum_probs=97.0

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      ++.-.++||-|.||.||.|.++. ...||||.|+.. ....+||++|+.+|+.++|||||+|+|+|....+.|||.|||.
T Consensus       268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~  346 (1157)
T KOG4278|consen  268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMC  346 (1157)
T ss_pred             heeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEeccc
Confidence            34455799999999999999976 778999999753 4567899999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCC---------------CcCCHHHHHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYT---------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~---------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|+|.+||+.-.+.               ..+.+-...+.||+||||||
T Consensus       347 yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARN  395 (1157)
T KOG4278|consen  347 YGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARN  395 (1157)
T ss_pred             CccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Confidence            99999999875432               12355577899999999998

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.54  E-value=1.6e-14  Score=148.05  Aligned_cols=106  Identities=25%  Similarity=0.457  Sum_probs=86.6

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHc--cCCCcccceEEEEEeCC----eEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAK--LQHRNLVKLIGCCTQRD----ERML  577 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~--l~H~nlv~l~g~~~~~~----~~~l  577 (617)
                      ..+...+.+|+|+||.||||.+ +++.||||+++   .+..+.|++|-.+...  ++|+||++++++-..+.    +.+|
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL-~~~~VAVKifp---~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL  285 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQL-DNRLVAVKIFP---EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL  285 (534)
T ss_pred             CchhhHHHhhcCccceeehhhc-cCceeEEEecC---HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence            3445567899999999999999 55899999986   4556789888877764  68999999999876655    7899


Q ss_pred             EEeccCCCCHHHHHhcCCCCCcCCHHHHH-------------------------hhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTEHFFWSFFF-------------------------SFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~~l~w~~r~-------------------------~i~~~~~~~~n  617 (617)
                      |+||.++|||.+||..+    .++|..-+                         -|||||||-+|
T Consensus       286 Vt~fh~kGsL~dyL~~n----tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkN  346 (534)
T KOG3653|consen  286 VTEFHPKGSLCDYLKAN----TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKN  346 (534)
T ss_pred             EeeeccCCcHHHHHHhc----cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccc
Confidence            99999999999999655    47887433                         57788888877

>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []

Probab=99.52  E-value=8.4e-15  Score=114.02  Aligned_cols=66  Identities=55%  Similarity=1.141  Sum_probs=57.8

Q ss_pred             cCCCCceEEeecccCCCCcceeeecccchHHHHHHHhhcccccccccccccCCCCceEecccccccc
Q 007129          339 CEHGDGFLKRESVKLPDTRFSLVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDM  405 (617)
Q Consensus       339 C~~~~~f~~~~~~~~p~~~~~~~~~~~s~~~C~~~Cl~nCsC~a~~~~~~~~~~~gC~~~~~~l~~~  405 (617)
                      |+.+++|+++++|++|+++...++..+++++|++.||+||+|+||+|.+.. ++.+|.+|.++|+|+
T Consensus         1 C~~~d~F~~l~~~~~p~~~~~~~~~~~s~~~C~~~Cl~nCsC~Ayay~~~~-~~~~C~lW~~~L~d~   66 (66)
T PF08276_consen    1 CGSGDGFLKLPNMKLPDFDNAIVDSSVSLEECEKACLSNCSCTAYAYSNLS-GGGGCLLWYGDLVDL   66 (66)
T ss_pred             CcCCCEEEEECCeeCCCCcceeeecCCCHHHHHhhcCCCCCEeeEEeeccC-CCCEEEEEcCEeecC
Confidence            545789999999999999887776678999999999999999999997655 567999999999874

These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.52  E-value=2.9e-14  Score=143.79  Aligned_cols=112  Identities=22%  Similarity=0.349  Sum_probs=92.0

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--h-----hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--G-----QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~-----~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      |-..+.||+|+||.|-++.-+. |+.||||.+.+..  .     .......+|+++|.+++|||||++++++......||
T Consensus       174 yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~Ym  253 (475)
T KOG0615|consen  174 YIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYM  253 (475)
T ss_pred             eEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEE
Confidence            4456799999999999998765 9999999997531  1     112335799999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCCCC-------------cCCHHHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTE-------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~-------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+|||++|+|.+++..++.-.             .+-.-+-..|+||||||.|
T Consensus       254 VlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeN  306 (475)
T KOG0615|consen  254 VLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPEN  306 (475)
T ss_pred             EEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcce
Confidence            999999999999998765311             1344567789999999988

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.51  E-value=1e-13  Score=165.55  Aligned_cols=104  Identities=28%  Similarity=0.453  Sum_probs=85.8

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      ..+...+.||+|+||.||+|... ++..||||+++.....    ...|++.+++++|||||+++|+|.+....++|||||
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~  765 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYI  765 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCC
Confidence            34667789999999999999984 5889999998643221    234578899999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHHHHH-------------------hhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWSFFF-------------------SFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~~r~-------------------~i~~~~~~~~n  617 (617)
                      ++|+|.++|+.      ++|.+|.                   .|+|+||||+|
T Consensus       766 ~~g~L~~~l~~------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~N  813 (968)
T PLN00113        766 EGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEK  813 (968)
T ss_pred             CCCcHHHHHhc------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHh
Confidence            99999999953      6776555                   45678888877

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.49  E-value=1.5e-15  Score=163.83  Aligned_cols=109  Identities=32%  Similarity=0.497  Sum_probs=90.8

Q ss_pred             CcceecccCceeEEEEEEc-CC----cEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          508 DKNKLGEGGFGPVYKGVLI-EG----QEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       508 ~~~~lG~G~fG~Vykg~l~-~g----~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ..++||.|+||+||||.+- .|    .+||+|.+... ..+...+|+.|+-.|++++||||+||+|+|.... +.||.+|
T Consensus       700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~  778 (1177)
T KOG1025|consen  700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL  778 (1177)
T ss_pred             hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence            3579999999999999873 33    46999998754 3455689999999999999999999999997765 8899999


Q ss_pred             cCCCCHHHHHhcCCC----CCcCCHH----------HHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLY----TEHFFWS----------FFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~----~~~l~w~----------~r~~i~~~~~~~~n  617 (617)
                      ||.|.|.+|++.++.    +.+|.|.          +-.++.||||++||
T Consensus       779 mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRN  828 (1177)
T KOG1025|consen  779 MPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARN  828 (1177)
T ss_pred             cccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhh
Confidence            999999999997653    2356775          34578999999998

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.46  E-value=1.3e-13  Score=138.05  Aligned_cols=112  Identities=19%  Similarity=0.171  Sum_probs=92.9

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCC-eEEEEEecc
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD-ERMLIYEYL  582 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~-~~~lv~E~~  582 (617)
                      +...+.||+|..|+|||+.++. ++.+|+|.+... .+...++..+|++++.+.+||+||.++|++.... +..|+||||
T Consensus        81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYM  160 (364)
T KOG0581|consen   81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYM  160 (364)
T ss_pred             hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhc
Confidence            3335689999999999999976 788999999533 4455689999999999999999999999999988 599999999


Q ss_pred             CCCCHHHHHhcCCC--C-----------CcCCHHH-HHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLY--T-----------EHFFWSF-FFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~--~-----------~~l~w~~-r~~i~~~~~~~~n  617 (617)
                      .+|||++++....+  .           +-|..-+ ..+||||||||+|
T Consensus       161 DgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsN  209 (364)
T KOG0581|consen  161 DGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSN  209 (364)
T ss_pred             CCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHH
Confidence            99999999974321  0           1145555 4999999999998

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.44  E-value=3.5e-14  Score=133.80  Aligned_cols=115  Identities=24%  Similarity=0.322  Sum_probs=97.2

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      .++|..++.||+|.||.||.+..+. +..||+|.+.+..   .+-..++++|+++-+.|+||||++++|++.+....||+
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi  100 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI  100 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence            4678888999999999999999876 6789999996532   23346899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCC---CCC------------cCCHHHHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFL---YTE------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~---~~~------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      +||.++|+|...|.+.+   ...            .|...+.-++||||+||.|
T Consensus       101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpen  154 (281)
T KOG0580|consen  101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPEN  154 (281)
T ss_pred             EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHH
Confidence            99999999999999432   122            2455577899999999987

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.43  E-value=3.6e-13  Score=137.16  Aligned_cols=107  Identities=21%  Similarity=0.351  Sum_probs=85.2

Q ss_pred             ccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHc--cCCCcccceEEEEEeCC----eEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAK--LQHRNLVKLIGCCTQRD----ERM  576 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~--l~H~nlv~l~g~~~~~~----~~~  576 (617)
                      ...+...+.||+|.||.||+|.+ .|+.||||.+..   .+++.|.+|.++...  |+|+||+.+++.-..++    +++
T Consensus       210 arqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw  285 (513)
T KOG2052|consen  210 ARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW  285 (513)
T ss_pred             hheeEEEEEecCccccceeeccc-cCCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence            34566778999999999999998 688999999853   345678888887775  59999999998876543    689


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCcCCHHHH------------------------HhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYTEHFFWSFF------------------------FSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~~~l~w~~r------------------------~~i~~~~~~~~n  617 (617)
                      ||.||.++|||.+||...+    ++-..-                        =.|||||||-+|
T Consensus       286 LvTdYHe~GSL~DyL~r~t----v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKN  346 (513)
T KOG2052|consen  286 LVTDYHEHGSLYDYLNRNT----VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKN  346 (513)
T ss_pred             EeeecccCCcHHHHHhhcc----CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcccccccc
Confidence            9999999999999997643    332211                        168999999887

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.43  E-value=3.4e-13  Score=140.52  Aligned_cols=115  Identities=23%  Similarity=0.301  Sum_probs=98.6

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      ..++|...+.||+|+||.||.++-++ |..+|+|+|++.   ....++..+.|-.+|....+++||+|+-.+.+.+++||
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL  218 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL  218 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence            45788889999999999999999877 899999999864   34456778999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCCCCcCCHH--------------HHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTEHFFWS--------------FFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~~l~w~--------------~r~~i~~~~~~~~n  617 (617)
                      ||||+|+|++..+|..... -.-+|.              +++.+||+||||.|
T Consensus       219 iMEylPGGD~mTLL~~~~~-L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdN  271 (550)
T KOG0605|consen  219 IMEYLPGGDMMTLLMRKDT-LTEDWARFYIAETVLAIESIHQLGYIHRDIKPDN  271 (550)
T ss_pred             EEEecCCccHHHHHHhcCc-CchHHHHHHHHHHHHHHHHHHHcCcccccCChhh
Confidence            9999999999999986531 122343              77789999999988

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.37  E-value=6.2e-13  Score=133.18  Aligned_cols=115  Identities=21%  Similarity=0.244  Sum_probs=99.3

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      .++|...++||+|+||+||+.+-.+ ++.+|+|.+++.   .....+...+|..++.+++||.||.|+-.+...+.+|||
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            4678889999999999999998876 889999999754   234456789999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +||+++|.|..+|..... .            ..|+.-+...|++|||||.|
T Consensus       104 ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPEN  155 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPEN  155 (357)
T ss_pred             EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHH
Confidence            999999999999986532 1            13667788899999999987

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.37  E-value=2.1e-12  Score=136.79  Aligned_cols=112  Identities=20%  Similarity=0.258  Sum_probs=94.2

Q ss_pred             cCCCCcceecccCceeEEEEEE-cCCcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVL-IEGQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l-~~g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ..|...+.||+|+|+.||+++. ..|..||+|++.+.   .....+...+||++.+.|+|||||++++++.+.++.|||.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            4477788999999999999998 55999999999752   3445678999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCc---------------CCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEH---------------FFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~---------------l~w~~r~~i~~~~~~~~n  617 (617)
                      |+|++|+|.+++...+  .+               |-..+..+|||||||=-|
T Consensus        98 ELC~~~sL~el~Krrk--~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGN  148 (592)
T KOG0575|consen   98 ELCHRGSLMELLKRRK--PLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGN  148 (592)
T ss_pred             EecCCccHHHHHHhcC--CCCcHHHHHHHHHHHHHHHHHHhcCceecccchhh
Confidence            9999999999997322  11               233366689999999665

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.37  E-value=1.6e-12  Score=132.17  Aligned_cols=105  Identities=18%  Similarity=0.255  Sum_probs=85.8

Q ss_pred             eecccCceeEEEEEEcC-------------------------CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccce
Q 007129          511 KLGEGGFGPVYKGVLIE-------------------------GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKL  565 (617)
Q Consensus       511 ~lG~G~fG~Vykg~l~~-------------------------g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l  565 (617)
                      +||+|+||.||+|.+..                         ...|++|.+.........+|.+|+.+++.++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            69999999999998521                         13589999875444445789999999999999999999


Q ss_pred             EEEEEeCCeEEEEEeccCCCCHHHHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          566 IGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       566 ~g~~~~~~~~~lv~E~~~~GsL~~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      +++|.+....++||||+++|+|..++.....  .+++..++                .|+|+||||+|
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~N  147 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKG--RVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKN  147 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCccc
Confidence            9999999999999999999999999975432  34444443                67899999998

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.37  E-value=2.2e-12  Score=130.45  Aligned_cols=112  Identities=22%  Similarity=0.408  Sum_probs=92.4

Q ss_pred             cCCCCcceecccCceeEEEEEEc----CCcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI----EGQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~----~g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      ++|...+.||+|+||.||+|.+.    .+..||+|.++... ....+.|.+|+.++.+++||||++++|++..++..++|
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   84 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV   84 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence            45677789999999999999874    25689999987542 33456899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCCCCcCCHHHH----------------HhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYTEHFFWSFF----------------FSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~~~l~w~~r----------------~~i~~~~~~~~n  617 (617)
                      |||+++|+|.++|....  ..+.|.+.                ..|+|+||+|+|
T Consensus        85 ~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~n  137 (266)
T cd05064          85 TEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHK  137 (266)
T ss_pred             EEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhh
Confidence            99999999999997642  23555544                468899999987

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.35  E-value=1.5e-12  Score=138.96  Aligned_cols=113  Identities=19%  Similarity=0.256  Sum_probs=93.3

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      .|...++||+|+||.||++.... ++.+|+|.+...   .....+.+.+|+.++.+++|+||+++++++.+....++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            46677899999999999998765 789999999643   22345679999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+++|+|.++|.....-             ..|...+...|+|+||||+|
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~N  131 (381)
T cd05626          82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDN  131 (381)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHH
Confidence            99999999999764310             01344456689999999987

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.35  E-value=9.2e-13  Score=136.24  Aligned_cols=113  Identities=23%  Similarity=0.357  Sum_probs=92.5

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeC--CeEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR--DERMLI  578 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~--~~~~lv  578 (617)
                      +.|...++||+|.||.|||++... |+.||+|+++...  .....-..+||.+|++|.||||++|.+...+.  ..+|||
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV  196 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV  196 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence            446666799999999999998754 8999999997443  22334568999999999999999999999886  689999


Q ss_pred             EeccCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|||++ +|.-++....-+              .-|+..+...|.|||||.+|
T Consensus       197 FeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SN  248 (560)
T KOG0600|consen  197 FEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSN  248 (560)
T ss_pred             Eecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccc
Confidence            999987 899888775211              12677888999999999998

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.35  E-value=7.9e-13  Score=139.18  Aligned_cols=115  Identities=26%  Similarity=0.446  Sum_probs=92.7

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC---C--cEEEEeeccc-CchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeE
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE---G--QEIAAKRLSK-SSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDER  575 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~---g--~~vAvK~l~~-~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~  575 (617)
                      ..+.+...++||+|.||.||+|.+.+   |  ..||||..+. ......+.|+.|..+|++++|||||+|+|.|.+ .+.
T Consensus       387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~  465 (974)
T KOG4257|consen  387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPM  465 (974)
T ss_pred             ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cce
Confidence            34456667899999999999999843   2  3589999876 355667899999999999999999999999976 567


Q ss_pred             EEEEeccCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +||||.++.|.|.+||...+..              ..|..-+-.+..||||||||
T Consensus       466 WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRN  521 (974)
T KOG4257|consen  466 WIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARN  521 (974)
T ss_pred             eEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhh
Confidence            8999999999999999876422              11233344578999999998

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.33  E-value=5.4e-12  Score=127.54  Aligned_cols=119  Identities=18%  Similarity=0.258  Sum_probs=98.3

Q ss_pred             HHHhccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          499 IANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       499 l~~at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      ++.+++++.....||+|+||.||++...+ +..||+|.+........+.+.+|+.++++++|+||+++++++..++..++
T Consensus         3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   82 (268)
T cd06624           3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI   82 (268)
T ss_pred             cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence            34567777777899999999999999765 77899999876655667789999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCCCC----------------cCCHHHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTE----------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~----------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+||+++++|.+++.......                .|..-+...|+|+||+|+|
T Consensus        83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~n  138 (268)
T cd06624          83 FMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDN  138 (268)
T ss_pred             EEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHH
Confidence            999999999999998642111                1223355688999999987

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.33  E-value=2.6e-12  Score=136.90  Aligned_cols=114  Identities=22%  Similarity=0.237  Sum_probs=93.0

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...++||+|+||.||++.... ++.||||.+...   .....+.+.+|+.++.+++||||+++++++.+....+|||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            357777899999999999998754 889999998642   2234567899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.++|.....-             ..|..-+...|+|+||||+|
T Consensus        81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~N  131 (377)
T cd05629          81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDN  131 (377)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHH
Confidence            999999999999754310             01233456689999999987

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.32  E-value=7.1e-13  Score=141.21  Aligned_cols=111  Identities=29%  Similarity=0.358  Sum_probs=90.8

Q ss_pred             CCCcceecccCceeEEEEEEcC--Cc--EEEEeecccCch-hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE--GQ--EIAAKRLSKSSG-QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~--g~--~vAvK~l~~~~~-~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      +...++||+|.||.|++|.+..  |.  .||||+++.... ..+.+|++|+.+|-+|+|+||+||+|.... ...++|+|
T Consensus       112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~E  190 (1039)
T KOG0199|consen  112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFE  190 (1039)
T ss_pred             HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhh
Confidence            3445799999999999999864  43  589999986543 367899999999999999999999999987 77889999


Q ss_pred             ccCCCCHHHHHhcCCCCCcC---------------CHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHF---------------FWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l---------------~w~~r~~i~~~~~~~~n  617 (617)
                      .++.|||.+-|++..+..+|               ..-.-.+.||+||||||
T Consensus       191 LaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARN  242 (1039)
T KOG0199|consen  191 LAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARN  242 (1039)
T ss_pred             hcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhh
Confidence            99999999999984333222               22344478999999999

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.32  E-value=5.7e-12  Score=130.00  Aligned_cols=114  Identities=29%  Similarity=0.470  Sum_probs=90.8

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-----------------CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccce
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-----------------GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKL  565 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-----------------g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l  565 (617)
                      +.|...++||+|+||.||++...+                 +..||+|.+... ......+|.+|+.++.+++||||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            346667899999999999997532                 336999998753 33445689999999999999999999


Q ss_pred             EEEEEeCCeEEEEEeccCCCCHHHHHhcCCC----------------CCcCCHH----------------HHHhhhhccc
Q 007129          566 IGCCTQRDERMLIYEYLPNKSLNDFIFGFLY----------------TEHFFWS----------------FFFSFENLSL  613 (617)
Q Consensus       566 ~g~~~~~~~~~lv~E~~~~GsL~~~L~~~~~----------------~~~l~w~----------------~r~~i~~~~~  613 (617)
                      ++++...+..++|+||+++|+|.++|.....                ...+.|.                +...|+|+||
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dl  164 (304)
T cd05096          85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDL  164 (304)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCc
Confidence            9999999999999999999999999865321                0123333                4567899999


Q ss_pred             ccCC
Q 007129          614 VDRN  617 (617)
Q Consensus       614 ~~~n  617 (617)
                      ||+|
T Consensus       165 kp~N  168 (304)
T cd05096         165 ATRN  168 (304)
T ss_pred             chhh
Confidence            9998

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.32  E-value=3.7e-12  Score=133.52  Aligned_cols=92  Identities=24%  Similarity=0.445  Sum_probs=75.8

Q ss_pred             ccCCCCcceecccCceeEEEEEEc------CCcEEEEeecccCc-hhhHHHHHHHHHHHHcc-CCCcccceEEEEEeC-C
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKSS-GQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQR-D  573 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~------~g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~-~  573 (617)
                      .++|...++||+|+||.||++...      .+..||||.++... ....+.+.+|+.++.++ +||||++++++|... .
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG   85 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence            456777889999999999999752      24679999997432 23456799999999999 899999999998764 4


Q ss_pred             eEEEEEeccCCCCHHHHHhcC
Q 007129          574 ERMLIYEYLPNKSLNDFIFGF  594 (617)
Q Consensus       574 ~~~lv~E~~~~GsL~~~L~~~  594 (617)
                      ..++||||+++|+|.++|...
T Consensus        86 ~~~lv~ey~~~g~L~~~l~~~  106 (338)
T cd05102          86 PLMVIVEFCKYGNLSNFLRAK  106 (338)
T ss_pred             ceEEEEecCCCCcHHHHHHhc
Confidence            578999999999999999753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.32  E-value=3.6e-12  Score=135.73  Aligned_cols=92  Identities=28%  Similarity=0.407  Sum_probs=77.6

Q ss_pred             ccCCCCcceecccCceeEEEEEEc------CCcEEEEeecccCc-hhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCe
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKSS-GQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDE  574 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~------~g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~  574 (617)
                      .++|...++||+|+||.||++...      .+..||||+++... ....+.+.+|+.++..+ +||||++++++|.....
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~  113 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP  113 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence            345777889999999999999741      25689999996432 33456789999999999 89999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcC
Q 007129          575 RMLIYEYLPNKSLNDFIFGF  594 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~  594 (617)
                      .++||||+++|+|.++|...
T Consensus       114 ~~lv~E~~~~g~L~~~l~~~  133 (375)
T cd05104         114 TLVITEYCCYGDLLNFLRRK  133 (375)
T ss_pred             ceeeehhccCCcHHHHHHhc
Confidence            99999999999999999753

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.32  E-value=2.7e-12  Score=136.10  Aligned_cols=114  Identities=22%  Similarity=0.256  Sum_probs=93.8

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...+.||+|+||.||++.... ++.||||.+...   .......+.+|+.++..++||||+++++++..+...+||+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            357778899999999999999865 889999999643   1233467889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.++|..... .            ..|...+...|+|+||||+|
T Consensus        81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~N  131 (364)
T cd05599          81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDN  131 (364)
T ss_pred             CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHH
Confidence            99999999999976431 0            11334466689999999987

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.32  E-value=3.9e-12  Score=135.83  Aligned_cols=113  Identities=18%  Similarity=0.242  Sum_probs=93.2

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      .|...++||+|+||.||++.... ++.+|+|.+....   ....+.+.+|+.++.+++|+||+++++.+......+||||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            46777899999999999998765 7889999986432   2345678999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+++|+|.++|.....-             ..|...+...|+|+||||+|
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~N  131 (382)
T cd05625          82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDN  131 (382)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence            99999999999764310             01344466689999999987

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.32  E-value=2.4e-12  Score=123.30  Aligned_cols=111  Identities=25%  Similarity=0.431  Sum_probs=90.7

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhH-HHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGM-EEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~-~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      |...++||+|.||.||+|.... |+.||||+++... .++. ....+|++.++.++|+||+.|+.++-..+...||+|||
T Consensus         4 Y~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm   83 (318)
T KOG0659|consen    4 YEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFM   83 (318)
T ss_pred             hhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEec
Confidence            4445789999999999998754 8999999997432 2222 46789999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +. +|...|.++..-              +-+...++--|.||||||.|
T Consensus        84 ~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnN  131 (318)
T KOG0659|consen   84 PT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNN  131 (318)
T ss_pred             cc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccc
Confidence            75 899999875321              11344588899999999988

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.31  E-value=7.7e-13  Score=128.68  Aligned_cols=112  Identities=22%  Similarity=0.306  Sum_probs=90.3

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCch-hhH-HHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG-QGM-EEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~-~~~-~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      |....++|+|++|.|||++.++ |+.||||++..... ... +--++|++++++++|+|||.|+.+|......+||+||+
T Consensus         4 YE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~   83 (396)
T KOG0593|consen    4 YEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYC   83 (396)
T ss_pred             HhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeec
Confidence            4445689999999999999987 99999999864322 222 45689999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCC-------------CCcCCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLY-------------TEHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~-------------~~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++--|++.=+-...             -..+.|.+.-+||||||||.|
T Consensus        84 dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPEN  131 (396)
T KOG0593|consen   84 DHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPEN  131 (396)
T ss_pred             chHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhh
Confidence            88666654332211             023788899999999999988

>PHA02988 hypothetical protein; Provisional

Probab=99.31  E-value=1.3e-11  Score=126.09  Aligned_cols=104  Identities=17%  Similarity=0.234  Sum_probs=85.6

Q ss_pred             ceecccCceeEEEEEEcCCcEEEEeecccCchhh---HHHHHHHHHHHHccCCCcccceEEEEEe----CCeEEEEEecc
Q 007129          510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQG---MEEFENEVLLIAKLQHRNLVKLIGCCTQ----RDERMLIYEYL  582 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~---~~~f~~Ev~~l~~l~H~nlv~l~g~~~~----~~~~~lv~E~~  582 (617)
                      ..||+|++|.||+|.+ +|+.||||.++......   .+.|.+|+.++.+++|||||+++|++.+    ....++|+||+
T Consensus        26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~  104 (283)
T PHA02988         26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC  104 (283)
T ss_pred             eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence            5899999999999998 68899999997543222   4778899999999999999999999877    45678999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHHHH-----------------HhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWSFF-----------------FSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~~r-----------------~~i~~~~~~~~n  617 (617)
                      ++|+|.++|....   .++|.++                 ..++|+||+|+|
T Consensus       105 ~~g~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~n  153 (283)
T PHA02988        105 TRGYLREVLDKEK---DLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVS  153 (283)
T ss_pred             CCCcHHHHHhhCC---CCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhh
Confidence            9999999997643   3555433                 366789999987

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.30  E-value=5e-12  Score=132.31  Aligned_cols=113  Identities=21%  Similarity=0.298  Sum_probs=93.3

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      +|...++||+|+||.||++.... ++.||+|.++...   ....+.+.+|+.++..++||||+++++++......+||||
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   81 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME   81 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence            56777899999999999999875 8899999986432   2334678999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+++|+|.+++..... .            ..|..-+...|+|+||||+|
T Consensus        82 ~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~N  131 (333)
T cd05600          82 YVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPEN  131 (333)
T ss_pred             CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHH
Confidence            9999999999965421 0            11334466689999999987

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.30  E-value=8.3e-12  Score=133.82  Aligned_cols=92  Identities=25%  Similarity=0.424  Sum_probs=78.0

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC------CcEEEEeecccCc-hhhHHHHHHHHHHHHccC-CCcccceEEEEEeCCe
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE------GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQ-HRNLVKLIGCCTQRDE  574 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~------g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~~~~  574 (617)
                      .+.|...++||+|+||.||+|....      +..||||+++... ....+.|.+|+.++.++. |||||++++++.+...
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~  115 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP  115 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence            4567778899999999999998632      3469999997533 333467999999999996 9999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcC
Q 007129          575 RMLIYEYLPNKSLNDFIFGF  594 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~  594 (617)
                      .+|||||+++|+|.++|+..
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~  135 (400)
T cd05105         116 IYIITEYCFYGDLVNYLHKN  135 (400)
T ss_pred             eEEEEEecCCCcHHHHHHHh
Confidence            99999999999999998753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.30  E-value=4.5e-12  Score=132.50  Aligned_cols=114  Identities=18%  Similarity=0.202  Sum_probs=94.7

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...+.||+|+||.||++.... ++.||+|.+....   ....+.+.+|+.++.+++||||+++++++...+..++|+
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            457777899999999999999865 8899999986431   233467899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.++|.....-             ..|.+-+...|+|+||||+|
T Consensus        98 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~N  148 (329)
T PTZ00263         98 EFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPEN  148 (329)
T ss_pred             cCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHH
Confidence            999999999999764321             12445567789999999987

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.30  E-value=1.2e-11  Score=124.07  Aligned_cols=111  Identities=27%  Similarity=0.383  Sum_probs=92.1

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      ++|...+.||+|+||.||++...++..+|+|.+... ....++|.+|+.++.+++||||+++++++......++||||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            346667899999999999999887888999988643 2335689999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +|+|.+++....  ..++|.                +...|+|+||+|+|
T Consensus        83 ~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~n  130 (256)
T cd05114          83 NGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARN  130 (256)
T ss_pred             CCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcce
Confidence            999999997542  134554                34457899999987

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.29  E-value=1.5e-12  Score=135.95  Aligned_cols=113  Identities=22%  Similarity=0.309  Sum_probs=96.4

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ++|...+.||+|+||.||||+-+. .+.||+|.+.+..  ..+.+.+++|++++++++|||||.++..+....++++|.|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            456677899999999999999876 7889999997543  3456789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+.+ +|+.+|.....-             ..|..-+..+|+++|+||+|
T Consensus        82 ~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqn  130 (808)
T KOG0597|consen   82 YAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQN  130 (808)
T ss_pred             hhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcce
Confidence            9966 999999865420             23666678899999999998

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.29  E-value=1.5e-11  Score=128.71  Aligned_cols=111  Identities=16%  Similarity=0.119  Sum_probs=92.4

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ++|...++||+|+||.||++.... +..+|+|.+... .....+.|.+|+.++.+++||||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   84 (331)
T cd06649           5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH   84 (331)
T ss_pred             ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence            567778899999999999999865 788999998643 233456899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHH----------------H-HHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWS----------------F-FFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~----------------~-r~~i~~~~~~~~n  617 (617)
                      +++|+|.+++....   .+++.                + +-.|+|+||||+|
T Consensus        85 ~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~N  134 (331)
T cd06649          85 MDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSN  134 (331)
T ss_pred             CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhh
Confidence            99999999997643   12222                2 2358999999998

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.29  E-value=5.8e-12  Score=133.56  Aligned_cols=114  Identities=19%  Similarity=0.219  Sum_probs=93.1

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...++||+|+||.||++.... ++.+|+|.++...   ......+.+|+.++.+++|+||+++++.+.+....+|||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            357778899999999999998765 8899999986432   233457889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.++|.....-             ..|...+...|+|+||||+|
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~N  131 (363)
T cd05628          81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDN  131 (363)
T ss_pred             cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHH
Confidence            999999999999754310             01333456689999999987

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.29  E-value=6.3e-12  Score=133.93  Aligned_cols=113  Identities=18%  Similarity=0.239  Sum_probs=92.7

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      +|...++||+|+||.||++.... ++.||||.+....   ....+.+.+|+.++.+++|+||+++++.+.+.+..++|||
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence            57778899999999999998765 8899999986432   2334678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+++|+|.++|..... .            ..|...+...|+|+||||+|
T Consensus        82 ~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~N  131 (376)
T cd05598          82 YIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDN  131 (376)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHH
Confidence            9999999999976431 0            01233455679999999987

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.29  E-value=1.2e-11  Score=126.54  Aligned_cols=111  Identities=24%  Similarity=0.267  Sum_probs=90.0

Q ss_pred             CCCcceecccCceeEEEEEEc-CCcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          506 FSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      |...+.||+|+||.||++... +++.||+|.+....   ......+.+|+.++.+++|+|++++.+++.+.+..++|+||
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence            556689999999999999875 48899999986432   22335688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +++|+|.+++.... ...+++.                +...|+|+||||+|
T Consensus        82 ~~~g~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~N  132 (285)
T cd05631          82 MNGGDLKFHIYNMG-NPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPEN  132 (285)
T ss_pred             cCCCcHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHH
Confidence            99999998886532 2234444                33468999999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.29  E-value=5.2e-12  Score=134.24  Aligned_cols=117  Identities=18%  Similarity=0.157  Sum_probs=95.3

Q ss_pred             HhccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEE
Q 007129          501 NATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERM  576 (617)
Q Consensus       501 ~at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~  576 (617)
                      ...++|...++||+|+||.||++.... ++.+|+|.+.+.   .....+.+.+|+.++..++||||+++++++..+...+
T Consensus        40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~  119 (370)
T cd05621          40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY  119 (370)
T ss_pred             CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence            345678888999999999999999865 788999998642   2233456889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|+||+++|+|.+++......            ..|...+...|+|+||||+|
T Consensus       120 lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~N  172 (370)
T cd05621         120 MVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDN  172 (370)
T ss_pred             EEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHH
Confidence            999999999999999654311            11334466789999999987

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.28  E-value=1.2e-11  Score=124.43  Aligned_cols=112  Identities=28%  Similarity=0.378  Sum_probs=93.4

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      ++|...++||+|+||.||++...+++.||+|.+... ....+.|.+|+.++.+++|+|++++++++...+..++++||++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   84 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA   84 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC-chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence            457777899999999999999877888999998643 2345789999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      +|+|.++|.... ...+.+.+                ..+++|+||+|+|
T Consensus        85 ~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~n  133 (261)
T cd05072          85 KGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAAN  133 (261)
T ss_pred             CCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhh
Confidence            999999997643 22344443                3468899999987

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.28  E-value=1.6e-11  Score=128.49  Aligned_cols=114  Identities=17%  Similarity=0.155  Sum_probs=92.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ++|...++||+|+||.||++.... +..+|+|.+... .....+++.+|+.++.+++|+||+++++++...++.++||||
T Consensus         5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   84 (333)
T cd06650           5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH   84 (333)
T ss_pred             hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence            567778899999999999998864 788999988643 233456799999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCC-C------------cCCHHH-HHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYT-E------------HFFWSF-FFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~-~------------~l~w~~-r~~i~~~~~~~~n  617 (617)
                      +++|+|.++|.....- .            .|.+.+ +..|+|+||||+|
T Consensus        85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~N  134 (333)
T cd06650          85 MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSN  134 (333)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhh
Confidence            9999999999754310 0            011112 3358999999988

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.28  E-value=9.3e-12  Score=125.15  Aligned_cols=114  Identities=25%  Similarity=0.393  Sum_probs=96.6

Q ss_pred             ccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      ..+|...++||+|+||.||++...++..+|+|.+........+++.+|+.++..++|+|++++++++......++|+||+
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   84 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELM   84 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeec
Confidence            45577778999999999999999888899999997665555678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      ++|+|.+++.+.. ...++|.++.                .|+|+||+|+|
T Consensus        85 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~n  134 (261)
T cd05148          85 EKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARN  134 (261)
T ss_pred             ccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcce
Confidence            9999999998653 2345655443                45789999987

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.27  E-value=8.7e-12  Score=130.47  Aligned_cols=114  Identities=16%  Similarity=0.150  Sum_probs=92.9

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...++||+|+||.||++.... ++.||+|.+...   .....+.|.+|+.++..++|+||+++.+++...+..++||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            357777899999999999999865 788999998642   2233456889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.++|......              ..|...+...|+|+||||+|
T Consensus        81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~N  132 (331)
T cd05624          81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDN  132 (331)
T ss_pred             eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHH
Confidence            999999999999763211              11334467789999999987

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.27  E-value=2.7e-11  Score=122.32  Aligned_cols=112  Identities=27%  Similarity=0.396  Sum_probs=92.6

Q ss_pred             cCCCCcceecccCceeEEEEEEcC----CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE----GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~----g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      ++|+..+.||+|+||.||+|....    ...||||.++... .....+|.+|+.++.+++||||+++++.+...+..+++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            567778899999999999998853    3579999987543 33456899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +||+++++|.+++.....  .++|.                +...|+|+||+|+|
T Consensus        84 ~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~n  136 (266)
T cd05033          84 TEYMENGSLDKFLRENDG--KFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARN  136 (266)
T ss_pred             EEcCCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcce
Confidence            999999999999976432  34444                44468899999988

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.27  E-value=8e-12  Score=131.21  Aligned_cols=114  Identities=21%  Similarity=0.234  Sum_probs=91.8

Q ss_pred             cCCCCcceecccCceeEEEEEEcC--CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE--GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~--g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      ++|...+.||+|+||.||++....  +..||+|.+...   .....+.+.+|+.++..++||||+++++++.+.+..++|
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv  109 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV  109 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence            457777899999999999998754  368999998642   223456789999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |||+++|+|.++|.....-             ..|..-+...|+|+||||+|
T Consensus       110 ~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~N  161 (340)
T PTZ00426        110 LEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPEN  161 (340)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHH
Confidence            9999999999999764320             01223345578999999987

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.27  E-value=9.4e-12  Score=130.20  Aligned_cols=114  Identities=18%  Similarity=0.195  Sum_probs=92.8

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...+.||+|+||.||++.... ++.||+|.+.+.   .....+.|.+|+.++..++|+||+++++++.+.+..++|+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            356777899999999999999865 889999998642   2233466899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.++|......              ..|...+...|+|+||||+|
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~N  132 (331)
T cd05597          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDN  132 (331)
T ss_pred             ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHH
Confidence            999999999999653211              11334466789999999987

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.27  E-value=5.2e-12  Score=129.56  Aligned_cols=113  Identities=15%  Similarity=0.121  Sum_probs=92.2

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      +|...++||+|+||.||++.... ++.||+|.+....   ....+.+.+|+.++.+++||||+++++++.+....++|+|
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   81 (291)
T cd05612           2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME   81 (291)
T ss_pred             CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence            56777899999999999999864 8899999986421   2334678999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+++|+|.+++.....-             ..|..-+...|+|+||+|+|
T Consensus        82 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N  131 (291)
T cd05612          82 YVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPEN  131 (291)
T ss_pred             CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHH
Confidence            99999999999764310             11333456689999999987

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.26  E-value=8.9e-12  Score=131.21  Aligned_cols=116  Identities=19%  Similarity=0.291  Sum_probs=96.1

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC----ch-hhHHHHHHHHHHHHccC-CCcccceEEEEEeCCe
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS----SG-QGMEEFENEVLLIAKLQ-HRNLVKLIGCCTQRDE  574 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~----~~-~~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~~~~  574 (617)
                      ....|...+.||+|.||+|+.+.... +..||+|.+++.    .. ...+...+|+.+++.++ ||||++++.+......
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~   94 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK   94 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence            34567778899999999999997754 899999977643    11 23456678999999998 9999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      .++||||+.+|+|.+++.+..+-             ..++..++..|+||||||+|
T Consensus        95 ~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~EN  150 (370)
T KOG0583|consen   95 IYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPEN  150 (370)
T ss_pred             EEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHH
Confidence            99999999999999999984321             13566788899999999988

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.26  E-value=6.1e-12  Score=133.74  Aligned_cols=116  Identities=21%  Similarity=0.190  Sum_probs=93.8

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      ..++|...++||+|+||.||++.... ++.+|+|.+...   .....+.+.+|+.+++.++||||+++++++......++
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            34668888899999999999998865 889999998642   22334568899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+||+++|+|.+++......            ..|...+...|+|+||||+|
T Consensus       121 v~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~N  172 (370)
T cd05596         121 VMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDN  172 (370)
T ss_pred             EEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH
Confidence            99999999999999764311            01233355689999999987

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.26  E-value=4.6e-12  Score=136.12  Aligned_cols=109  Identities=28%  Similarity=0.330  Sum_probs=89.1

Q ss_pred             cceecccCceeEEEEEEcC-CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCC------eEEEEEe
Q 007129          509 KNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD------ERMLIYE  580 (617)
Q Consensus       509 ~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~------~~~lv~E  580 (617)
                      .+.||+|+||.||+|+.+. |+.||||..+.. .....+...+|+++++++.|+|||++.+.-.+..      ...+|||
T Consensus        18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmE   97 (732)
T KOG4250|consen   18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVME   97 (732)
T ss_pred             hhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEe
Confidence            3579999999999999654 999999999753 3455688999999999999999999998765543      5689999


Q ss_pred             ccCCCCHHHHHhcCCCCCc----------------CCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEH----------------FFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~----------------l~w~~r~~i~~~~~~~~n  617 (617)
                      ||++|||...|.++....-                |..-+--+|+||||||-|
T Consensus        98 yC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~N  150 (732)
T KOG4250|consen   98 YCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGN  150 (732)
T ss_pred             ecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCc
Confidence            9999999999998753211                333355689999999987

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.26  E-value=1.3e-11  Score=128.75  Aligned_cols=108  Identities=19%  Similarity=0.110  Sum_probs=88.5

Q ss_pred             ceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCC
Q 007129          510 NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNK  585 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~G  585 (617)
                      +.||+|+||.||++.... ++.+|+|.++..   .......+.+|+.++.+++||||+++.+++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            379999999999998764 889999998743   2234467889999999999999999999999999999999999999


Q ss_pred             CHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          586 SLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       586 sL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|.+++.....-             ..|..-+...|+|+||||+|
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~N  125 (323)
T cd05571          81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLEN  125 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHH
Confidence            999999754310             11334456689999999987

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.25  E-value=1e-11  Score=131.99  Aligned_cols=122  Identities=19%  Similarity=0.169  Sum_probs=98.2

Q ss_pred             HHHHHHhccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEe
Q 007129          496 WMAIANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ  571 (617)
Q Consensus       496 ~~~l~~at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~  571 (617)
                      +.++....++|...+.||+|+||.||++.... ++.+|+|.+...   .....+.+.+|+.++..++||||+++++.+..
T Consensus        35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~  114 (371)
T cd05622          35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  114 (371)
T ss_pred             HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence            34445556789989999999999999999875 788999998632   22334568899999999999999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHHhcCCCCC------------cCCHHHHHhhhhcccccCC
Q 007129          572 RDERMLIYEYLPNKSLNDFIFGFLYTE------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       572 ~~~~~lv~E~~~~GsL~~~L~~~~~~~------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      ....++|+||+++|+|.+++.......            .|...+...|+|+||||+|
T Consensus       115 ~~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~N  172 (371)
T cd05622         115 DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDN  172 (371)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHH
Confidence            999999999999999999997543110            1334456689999999988

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.25  E-value=2.3e-11  Score=122.58  Aligned_cols=111  Identities=30%  Similarity=0.483  Sum_probs=93.2

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      +|...++||+|+||.||++...+ ++.||+|.+... ....+++.+|+.++.+++|+|++++++++...+..++++||++
T Consensus         7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (263)
T cd05052           7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT   85 (263)
T ss_pred             HeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence            46667899999999999999865 788999998643 3446789999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      +++|.+++.... ...++|..                ...|+|+||+|+|
T Consensus        86 ~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~n  134 (263)
T cd05052          86 YGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARN  134 (263)
T ss_pred             CCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcce
Confidence            999999997643 23456654                3468899999998

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.25  E-value=2.3e-11  Score=122.45  Aligned_cols=113  Identities=24%  Similarity=0.383  Sum_probs=94.1

Q ss_pred             ccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      .++|...+.||+|++|.||++....++.||+|.++... ...++|.+|+.++++++|+|++++++++...+..++++||+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM   83 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence            35577778999999999999998778889999986432 34578999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      ++++|.+++.... ...++|..                ...|+|+||+|+|
T Consensus        84 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~N  133 (261)
T cd05068          84 KYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARN  133 (261)
T ss_pred             cCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcce
Confidence            9999999997643 22345553                3467889999987

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.25  E-value=3.3e-11  Score=122.87  Aligned_cols=114  Identities=32%  Similarity=0.442  Sum_probs=91.1

Q ss_pred             cCCCCcceecccCceeEEEEEEc-----CCcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-----EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-----~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      ++|+..++||+|+||.||+|...     .+..+|+|.+... ......+|.+|+.++++++||||+++++++..+...++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            34666689999999999999852     3578999999743 33445789999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCC--------------CCcCCHH----------------HHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLY--------------TEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~--------------~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ||||+++|+|.++|.....              ...+++.                +...|+|+||+|+|
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~n  154 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARN  154 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccce
Confidence            9999999999999963321              1224443                44468999999988

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins

Probab=99.24  E-value=7.8e-12  Score=100.50  Aligned_cols=71  Identities=24%  Similarity=0.430  Sum_probs=60.9

Q ss_pred             cCCCCceEEeecccCCCCcceeeecccchHHHHHHHhh---cccccccccccccCCCCceEeccccc-cccccccccccc
Q 007129          339 CEHGDGFLKRESVKLPDTRFSLVDNKISLLECKELCSK---NCSCTAYANADVRGGGSGCLLWFHDL-IDMKELSESGQD  414 (617)
Q Consensus       339 C~~~~~f~~~~~~~~p~~~~~~~~~~~s~~~C~~~Cl~---nCsC~a~~~~~~~~~~~gC~~~~~~l-~~~~~~~~~~~~  414 (617)
                      |...+.|+++.++++|++..      .+.++|++.|++   ||+|.||+|.+.   +.+|.+|.+++ .+++.....+.+
T Consensus         5 ~~~~g~fl~~~~~klpd~~~------~s~~eC~~~Cl~~~~nCsC~Aya~~~~---~~gC~~W~~~l~~d~~~~~~~g~~   75 (80)
T cd00129           5 CKSAGTTLIKIALKIKTTKA------NTADECANRCEKNGLPFSCKAFVFAKA---RKQCLWFPFNSMSGVRKEFSHGFD   75 (80)
T ss_pred             eecCCeEEEeecccCCcccc------cCHHHHHHHHhcCCCCCCceeeeccCC---CCCeEEecCcchhhHHhccCCCce
Confidence            33467899999999998755      589999999999   999999999752   35899999999 999888777899


Q ss_pred             eeee
Q 007129          415 LFVR  418 (617)
Q Consensus       415 ~~vr  418 (617)
                      +|+|
T Consensus        76 Ly~r   79 (80)
T cd00129          76 LYEN   79 (80)
T ss_pred             eEeE
Confidence            9997

Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.24  E-value=3.3e-11  Score=122.17  Aligned_cols=114  Identities=26%  Similarity=0.410  Sum_probs=92.9

Q ss_pred             cCCCCcceecccCceeEEEEEEcC------CcEEEEeecccCchh-hHHHHHHHHHHHHccCCCcccceEEEEEeCCeEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE------GQEIAAKRLSKSSGQ-GMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERM  576 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~------g~~vAvK~l~~~~~~-~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~  576 (617)
                      ++|.....||+|+||.||++....      .+.+++|.+...... ..++|.+|+.++.+++|+|++++++++......+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            456777899999999999998642      457999988654333 4578999999999999999999999999888999


Q ss_pred             EEEeccCCCCHHHHHhcCCCC------CcCCHHHHH----------------hhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYT------EHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~------~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      +|+||+++|+|.++|......      ..+.|..+.                +|+|+||+|+|
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~N  147 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARN  147 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccce
Confidence            999999999999999764311      135666444                58899999998

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.24  E-value=1.5e-11  Score=128.11  Aligned_cols=108  Identities=19%  Similarity=0.121  Sum_probs=87.7

Q ss_pred             ceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCC
Q 007129          510 NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNK  585 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~G  585 (617)
                      +.||+|+||.||++.... +..||+|.++..   .......+.+|+.++.+++||||+++++++......++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            379999999999998754 889999998643   2234467889999999999999999999999999999999999999


Q ss_pred             CHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          586 SLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       586 sL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|..++..... .            ..|...+...|+|+||||+|
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~N  125 (323)
T cd05595          81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLEN  125 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHH
Confidence            99998875431 0            01233355678999999987

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.24  E-value=1.5e-11  Score=131.01  Aligned_cols=90  Identities=30%  Similarity=0.495  Sum_probs=76.8

Q ss_pred             cCCCCcceecccCceeEEEEEEc------CCcEEEEeecccCc-hhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKSS-GQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDER  575 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~------~g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~  575 (617)
                      ++|...+.||+|+||.||++...      .+..||+|+++... ....+.+.+|+.++..+ +|+|||+++++|......
T Consensus        38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~  117 (374)
T cd05106          38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPV  117 (374)
T ss_pred             HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCe
Confidence            46777889999999999998742      23579999997532 33356789999999999 899999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhc
Q 007129          576 MLIYEYLPNKSLNDFIFG  593 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~  593 (617)
                      ++|+||+++|+|.++|+.
T Consensus       118 ~lv~ey~~~g~L~~~l~~  135 (374)
T cd05106         118 LVITEYCCYGDLLNFLRK  135 (374)
T ss_pred             EEeHhhccCCcHHHHHHh
Confidence            999999999999999964

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.24  E-value=2.2e-11  Score=123.14  Aligned_cols=107  Identities=24%  Similarity=0.368  Sum_probs=86.0

Q ss_pred             eecccCceeEEEEEEcC---CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCC
Q 007129          511 KLGEGGFGPVYKGVLIE---GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKS  586 (617)
Q Consensus       511 ~lG~G~fG~Vykg~l~~---g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~Gs  586 (617)
                      +||+|+||.||+|....   ...+++|.+.... .....+|.+|+.+++.++|+||+++++.+......++|+||+++|+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            69999999999997654   3468888876432 3345678999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCC--CCcC----------------CHHHHHhhhhcccccCC
Q 007129          587 LNDFIFGFLY--TEHF----------------FWSFFFSFENLSLVDRN  617 (617)
Q Consensus       587 L~~~L~~~~~--~~~l----------------~w~~r~~i~~~~~~~~n  617 (617)
                      |.++|.....  ....                ..-+...|+|+||||+|
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~N  130 (269)
T cd05042          82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRN  130 (269)
T ss_pred             HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhh
Confidence            9999976532  1112                22355688999999988

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.24  E-value=2.1e-11  Score=122.89  Aligned_cols=100  Identities=36%  Similarity=0.559  Sum_probs=81.8

Q ss_pred             cceecccCceeEEEEEEc-----CCcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          509 KNKLGEGGFGPVYKGVLI-----EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       509 ~~~lG~G~fG~Vykg~l~-----~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      .+.||.|.||.||+|.+.     .+..|+||.++.. .....++|.+|+..+.+++||||++++|+|...+..++|+||+
T Consensus         4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~   83 (259)
T PF07714_consen    4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC   83 (259)
T ss_dssp             EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred             eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence            468999999999999997     1568999999643 3445789999999999999999999999999888899999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHHHHHhhh
Q 007129          583 PNKSLNDFIFGFLYTEHFFWSFFFSFE  609 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~~r~~i~  609 (617)
                      ++|+|.++|.... ...++|.++..|+
T Consensus        84 ~~g~L~~~L~~~~-~~~~~~~~~~~i~  109 (259)
T PF07714_consen   84 PGGSLDDYLKSKN-KEPLSEQQRLSIA  109 (259)
T ss_dssp             TTEBHHHHHHHTC-TTTSBHHHHHHHH
T ss_pred             ccccccccccccc-ccccccccccccc
Confidence            9999999999862 3457777766554

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.24  E-value=1.8e-11  Score=129.68  Aligned_cols=113  Identities=19%  Similarity=0.229  Sum_probs=93.5

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      +|...+.||+|+||.||++.... ++.||+|.++..   .....+.+.+|+.++..++|+|++++++.+......+||||
T Consensus         2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E   81 (360)
T cd05627           2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME   81 (360)
T ss_pred             CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence            56777899999999999998865 889999998642   22334678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+++|+|.++|..... .            ..|...+...|+|+||||+|
T Consensus        82 ~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~N  131 (360)
T cd05627          82 FLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDN  131 (360)
T ss_pred             CCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHH
Confidence            9999999999975432 0            11344566789999999987

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.24  E-value=2.8e-11  Score=126.48  Aligned_cols=108  Identities=19%  Similarity=0.117  Sum_probs=88.2

Q ss_pred             ceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCC
Q 007129          510 NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNK  585 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~G  585 (617)
                      +.||+|+||.||++.... ++.||+|.+...   .......+.+|+.++..++||||+++.+++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            369999999999998754 889999998643   2334567899999999999999999999999999999999999999


Q ss_pred             CHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          586 SLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       586 sL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|..++.....-             ..|..-++..|+|+||||+|
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~N  125 (328)
T cd05593          81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLEN  125 (328)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHH
Confidence            999998654310             01233355689999999987

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.24  E-value=1.6e-11  Score=128.60  Aligned_cols=113  Identities=17%  Similarity=0.163  Sum_probs=91.5

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      +|...++||+|+||.||++.... ++.+|+|.+.+.   .....+.|..|+.++..++|+||+++.+++......++|||
T Consensus         2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (332)
T cd05623           2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD   81 (332)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence            56777899999999999999876 778999998642   12233568899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+++|+|.++|......              ..|...+...|+|+||||+|
T Consensus        82 y~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~N  132 (332)
T cd05623          82 YYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDN  132 (332)
T ss_pred             ccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHH
Confidence            99999999999763211              01233355678999999987

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.24  E-value=3.8e-11  Score=122.41  Aligned_cols=112  Identities=30%  Similarity=0.468  Sum_probs=91.0

Q ss_pred             cCCCCcceecccCceeEEEEEEc-----CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeC--CeEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-----EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR--DERM  576 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-----~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~--~~~~  576 (617)
                      .+|...+.||+|+||.||++.++     .+..||+|.+........++|.+|+.++.+++|||++++.+++...  ...+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            35666789999999999999863     3778999999766666678899999999999999999999987543  4678


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +|+||+++|+|.+++....  ..++|.                +...|+|+||+|+|
T Consensus        84 lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~n  138 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKHR--ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRN  138 (284)
T ss_pred             EEEEecCCCCHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhh
Confidence            9999999999999997542  235555                34467889999987

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.24  E-value=1.6e-11  Score=127.33  Aligned_cols=106  Identities=17%  Similarity=0.118  Sum_probs=87.0

Q ss_pred             ecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCCH
Q 007129          512 LGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSL  587 (617)
Q Consensus       512 lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~GsL  587 (617)
                      ||+|+||.||++.... ++.||+|.++..   .....+.+.+|+.++.+++||||+++++++...+..++|+||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            6999999999999865 789999998642   234456788999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          588 NDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       588 ~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      .++|.....-             ..|..-+...|+|+||||+|
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~N  123 (312)
T cd05585          81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPEN  123 (312)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHH
Confidence            9999754310             01233355678999999987

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.24  E-value=5.2e-11  Score=118.85  Aligned_cols=106  Identities=28%  Similarity=0.451  Sum_probs=88.7

Q ss_pred             ceecccCceeEEEEEEcCCcEEEEeecccCch-hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCCHH
Q 007129          510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSG-QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLN  588 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~-~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~GsL~  588 (617)
                      +.||+|+||.||++...+++.+|+|.+..... .....|.+|+.++.+++|||++++++++......++|+||+++++|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            36899999999999988888999999875433 33457999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          589 DFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       589 ~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      +++....  ..++|.++.                .|+|+||+|+|
T Consensus        81 ~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~n  123 (250)
T cd05085          81 SFLRKKK--DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARN  123 (250)
T ss_pred             HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChhe
Confidence            9997543  235555443                57889999987

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.24  E-value=3.1e-11  Score=121.26  Aligned_cols=110  Identities=28%  Similarity=0.435  Sum_probs=91.1

Q ss_pred             CCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      +|...+.||+|+||.||++...++..+|+|.+... ....++|.+|+.++.+++||||+++++++.+....++++||+++
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05113           5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN   83 (256)
T ss_pred             HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCC-cccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence            35566799999999999998877777999998643 23357899999999999999999999999998899999999999


Q ss_pred             CCHHHHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          585 KSLNDFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      |+|.+++.....  .++|.+++                .|+|+||+|+|
T Consensus        84 ~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~n  130 (256)
T cd05113          84 GCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARN  130 (256)
T ss_pred             CcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcce
Confidence            999999976432  35555333                58889999987

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.23  E-value=4.2e-11  Score=123.88  Aligned_cols=110  Identities=16%  Similarity=0.114  Sum_probs=90.9

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      +|...++||+|+||.||++.... +..+|+|.+... .....+++.+|++++.+++||||+++++++...+..++|+||+
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~   81 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM   81 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence            57778899999999999998764 778999988643 2334467899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHH----------------H-HHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWS----------------F-FFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~----------------~-r~~i~~~~~~~~n  617 (617)
                      ++++|.+++....   .+++.                + +..|+|+||+|+|
T Consensus        82 ~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~n  130 (308)
T cd06615          82 DGGSLDQVLKKAG---RIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSN  130 (308)
T ss_pred             CCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHH
Confidence            9999999997542   23332                2 2468999999987

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.23  E-value=3.3e-11  Score=121.63  Aligned_cols=106  Identities=19%  Similarity=0.303  Sum_probs=86.2

Q ss_pred             ceecccCceeEEEEEEcC-------------CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEE
Q 007129          510 NKLGEGGFGPVYKGVLIE-------------GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERM  576 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-------------g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~  576 (617)
                      +.||+|+||.||+|....             ...|++|.+..........|..|+.++..++||||+++++++......+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            368999999999998632             2258999887554455568899999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCcCCHHHH----------------HhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYTEHFFWSFF----------------FSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~~~l~w~~r----------------~~i~~~~~~~~n  617 (617)
                      +|+||+++|+|..++....  ..+++..+                ..|+|+||||+|
T Consensus        81 lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~N  135 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRKS--DVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKN  135 (262)
T ss_pred             EEEecccCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCccc
Confidence            9999999999999987543  23455433                368999999998

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.23  E-value=1.8e-11  Score=127.91  Aligned_cols=111  Identities=22%  Similarity=0.254  Sum_probs=92.1

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      +|...+.||+|+||.||++.... ++.+|+|.++...   ....+.+.+|+.++..++|+||+++.+++......++|||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (330)
T cd05601           2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME   81 (330)
T ss_pred             CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence            57777899999999999998764 8899999987432   2344678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCC----------------HHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFF----------------WSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~----------------w~~r~~i~~~~~~~~n  617 (617)
                      |+++|+|.+++.....  .++                .-+...|+|+||||+|
T Consensus        82 ~~~~~~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~N  132 (330)
T cd05601          82 YQPGGDLLSLLNRYED--QFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPEN  132 (330)
T ss_pred             CCCCCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHh
Confidence            9999999999976421  222                2355689999999998

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.23  E-value=4e-11  Score=121.83  Aligned_cols=116  Identities=23%  Similarity=0.399  Sum_probs=92.9

Q ss_pred             hccCCCCcceecccCceeEEEEEEc------CCcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCe
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDE  574 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~------~g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~  574 (617)
                      .+++|...++||+|+||.||++...      .+..||+|.+.... .....+|.+|+.++..++|+||+++++++.++..
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4566888899999999999998763      24679999986432 2345679999999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcCCC-------CCcCCHHHHH----------------hhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLY-------TEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~-------~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      .++|+||+++|+|.+++.+...       ...++|.+..                .++|+||+|+|
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~N  149 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARN  149 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchhe
Confidence            9999999999999999975321       1234555433                57899999998

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.23  E-value=4e-11  Score=128.52  Aligned_cols=92  Identities=26%  Similarity=0.439  Sum_probs=77.5

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC------CcEEEEeecccCch-hhHHHHHHHHHHHHccC-CCcccceEEEEEeCCe
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE------GQEIAAKRLSKSSG-QGMEEFENEVLLIAKLQ-HRNLVKLIGCCTQRDE  574 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~------g~~vAvK~l~~~~~-~~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~~~~  574 (617)
                      .+++...++||+|+||.||++....      +..||+|+++.... ...+.+.+|+.++.++. |||||+++|++.....
T Consensus        36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~  115 (401)
T cd05107          36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP  115 (401)
T ss_pred             HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence            3456667899999999999998632      45799999975432 33457999999999997 9999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcC
Q 007129          575 RMLIYEYLPNKSLNDFIFGF  594 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~  594 (617)
                      .++|+||+++|+|.++|+..
T Consensus       116 ~~iv~E~~~~g~L~~~l~~~  135 (401)
T cd05107         116 IYIITEYCRYGDLVDYLHRN  135 (401)
T ss_pred             cEEEEeccCCCcHHHHHHhc
Confidence            99999999999999999753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.23  E-value=6.4e-13  Score=127.99  Aligned_cols=113  Identities=22%  Similarity=0.395  Sum_probs=88.8

Q ss_pred             CCCCcceecccCceeEEEEEE-cCCcEEEEeeccc--CchhhHHHHHHHHHHHHccCCCcccceEE-EEEeCCe-EEEEE
Q 007129          505 NFSDKNKLGEGGFGPVYKGVL-IEGQEIAAKRLSK--SSGQGMEEFENEVLLIAKLQHRNLVKLIG-CCTQRDE-RMLIY  579 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l-~~g~~vAvK~l~~--~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g-~~~~~~~-~~lv~  579 (617)
                      +|...++||+|.||.|||+.. .+|..+|.|.++-  .+.+..+....|+.++++|+|||||+.++ -+.+..+ +.|||
T Consensus        20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm   99 (375)
T KOG0591|consen   20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM   99 (375)
T ss_pred             HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence            345567999999999999976 4589999999862  34566778999999999999999999998 5566666 78999


Q ss_pred             eccCCCCHHHHHhcCCC-C----CcCCHHH----------------HHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLY-T----EHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~-~----~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      ||+..|+|...|..-++ +    ...-|+-                |-.|+||||||.|
T Consensus       100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaN  158 (375)
T KOG0591|consen  100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPAN  158 (375)
T ss_pred             HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchh
Confidence            99999999999874322 1    1233541                2238999999998

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.23  E-value=2.5e-11  Score=123.27  Aligned_cols=112  Identities=26%  Similarity=0.415  Sum_probs=90.2

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCC--eEEEEEecc
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD--ERMLIYEYL  582 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~--~~~lv~E~~  582 (617)
                      ....+.||+|+||.||++...+ |...|||.+........+.+.+|+.+|.+++|||||+.+|......  ...+.|||+
T Consensus        19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~   98 (313)
T KOG0198|consen   19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYA   98 (313)
T ss_pred             hhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeecc
Confidence            4456789999999999999876 8899999987543333677999999999999999999999855544  588999999


Q ss_pred             CCCCHHHHHhcCCCCCc--------------CCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEH--------------FFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~--------------l~w~~r~~i~~~~~~~~n  617 (617)
                      ++|+|.+++.+....-.              |..-+.-.|+|+||||+|
T Consensus        99 ~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~N  147 (313)
T KOG0198|consen   99 PGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPAN  147 (313)
T ss_pred             CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccce
Confidence            99999999987642101              222244469999999998

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.23  E-value=4.3e-11  Score=136.88  Aligned_cols=114  Identities=18%  Similarity=0.267  Sum_probs=92.6

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...++||+|+||.||++.... ++.||+|+++...   ....+.|.+|+.++++++||||+++++++.+.+..+++|
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            356777899999999999998765 8899999986431   233467999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCC--------CCcCC----------------HHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLY--------TEHFF----------------WSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~--------~~~l~----------------w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.++|.....        ...++                ..+...|+|+||||+|
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeN  143 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDN  143 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchhe
Confidence            99999999999864211        11122                3345589999999998

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.23  E-value=3.7e-11  Score=122.81  Aligned_cols=111  Identities=24%  Similarity=0.278  Sum_probs=89.5

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      |...++||+|+||.||++.... ++.||+|.+....   ......+.+|+.++..++|||++++++.+..++..++||||
T Consensus         2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05605           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence            5566799999999999998754 8899999986432   22235678999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +++|+|.+++.... ...+++.                +...|+|+||+|+|
T Consensus        82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~N  132 (285)
T cd05605          82 MNGGDLKFHIYNMG-NPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPEN  132 (285)
T ss_pred             cCCCcHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHH
Confidence            99999999987542 2234444                34468889999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.22  E-value=3.9e-11  Score=121.13  Aligned_cols=114  Identities=19%  Similarity=0.314  Sum_probs=92.9

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      ++|...++||+|+||.||+|... +++.||+|.+........+.+.+|+.++.+++|||++++++.+...+..++|+||+
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~   88 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC   88 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence            45777789999999999999975 47889999987544445567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++++|.+++..... .            ..+...+...|+|+||+|+|
T Consensus        89 ~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~n  136 (267)
T cd06646          89 GGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGAN  136 (267)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHH
Confidence            99999999865321 0            11233345578899999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.22  E-value=4.9e-11  Score=120.42  Aligned_cols=112  Identities=25%  Similarity=0.495  Sum_probs=92.3

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-C---cEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-G---QEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g---~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      ++|+..+.||+|+||.||++.... +   ..+|+|.++.. .....++|..|+.++.+++|+|++++.+++......++|
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII   84 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence            467777899999999999999864 3   36999998654 234457899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      |||+++++|.+++....  ..++|.++.                .|+|+||+|+|
T Consensus        85 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~N  137 (268)
T cd05063          85 TEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARN  137 (268)
T ss_pred             EEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhh
Confidence            99999999999997643  235555444                57899999988

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.22  E-value=1.6e-11  Score=123.36  Aligned_cols=106  Identities=26%  Similarity=0.399  Sum_probs=87.2

Q ss_pred             ceecccCceeEEEEEEcC--------CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          510 NKLGEGGFGPVYKGVLIE--------GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~--------g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      +.||+|+||.||++....        ...+|+|.+........++|..|+.++..++|||++++++++..+...++|+||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            369999999999998643        234888888655455567899999999999999999999999998999999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHHHH----------------HhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWSFF----------------FSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~~r----------------~~i~~~~~~~~n  617 (617)
                      +++|+|.++|.....  .++|..+                ..|+|+||+|+|
T Consensus        81 ~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~n  130 (258)
T cd05078          81 VKFGSLDTYLKKNKN--LINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKN  130 (258)
T ss_pred             CCCCcHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccce
Confidence            999999999976532  3455433                478899999988

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.22  E-value=6.8e-12  Score=122.80  Aligned_cols=117  Identities=21%  Similarity=0.247  Sum_probs=99.8

Q ss_pred             HHHHHHhccCCCCcceecccCceeEEEEEE-cCCcEEEEeecccCchhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCC
Q 007129          496 WMAIANATENFSDKNKLGEGGFGPVYKGVL-IEGQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRD  573 (617)
Q Consensus       496 ~~~l~~at~~f~~~~~lG~G~fG~Vykg~l-~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~  573 (617)
                      +.++..-|+     +.||+|+++.|--++- ..|.++|||++.+.....+....+|++++... .|+||+.|+.++.+..
T Consensus        75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~  149 (463)
T KOG0607|consen   75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT  149 (463)
T ss_pred             HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence            455555553     5899999999987754 46999999999988777778899999999987 4999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCC-------------CCcCCHHHHHhhhhcccccCC
Q 007129          574 ERMLIYEYLPNKSLNDFIFGFLY-------------TEHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       574 ~~~lv~E~~~~GsL~~~L~~~~~-------------~~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ..|||+|-|.+|.|..+|+.++.             ...||..+...|||+||||.|
T Consensus       150 ~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPEN  206 (463)
T KOG0607|consen  150 RFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPEN  206 (463)
T ss_pred             eEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccc
Confidence            99999999999999999986532             134888899999999999988

>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

Probab=99.22  E-value=1.6e-11  Score=101.03  Aligned_cols=80  Identities=50%  Similarity=0.941  Sum_probs=64.2

Q ss_pred             CCCcCCC---CceEEeecccCCCCcceeeecccchHHHHHHHhhcccccccccccccCCCCceEeccccccccccccccc
Q 007129          336 QLDCEHG---DGFLKRESVKLPDTRFSLVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHDLIDMKELSESG  412 (617)
Q Consensus       336 ~~~C~~~---~~f~~~~~~~~p~~~~~~~~~~~s~~~C~~~Cl~nCsC~a~~~~~~~~~~~gC~~~~~~l~~~~~~~~~~  412 (617)
                      +++|..+   +.|+.++++++|+..+..  ..+++++|++.|++||+|+||+|.+   ++.+|.+|...+.+.......+
T Consensus         2 ~~~C~~~~~~~~f~~~~~~~~~~~~~~~--~~~s~~~C~~~Cl~nCsC~a~~~~~---~~~~C~~~~~~~~~~~~~~~~~   76 (84)
T cd01098           2 PLNCGGDGSTDGFLKLPDVKLPDNASAI--TAISLEECREACLSNCSCTAYAYNN---GSGGCLLWNGLLNNLRSLSSGG   76 (84)
T ss_pred             CcccCCCCCCCEEEEeCCeeCCCchhhh--ccCCHHHHHHHHhcCCCcceeeecC---CCCeEEEEeceecceEeecCCC
Confidence            3467544   689999999999876653  5679999999999999999999864   3568999999988877655456


Q ss_pred             cceeeeec
Q 007129          413 QDLFVRMA  420 (617)
Q Consensus       413 ~~~~vr~~  420 (617)
                      ..+|||++
T Consensus        77 ~~~yiKv~   84 (84)
T cd01098          77 GTLYLRLA   84 (84)
T ss_pred             cEEEEEeC
Confidence            78999874

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.22  E-value=5.5e-11  Score=121.66  Aligned_cols=114  Identities=30%  Similarity=0.512  Sum_probs=93.4

Q ss_pred             cCCCCcceecccCceeEEEEEEc------CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~------~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      ++|...+.||+|+||.||++...      ++..+|+|.+........+.|.+|+.++.+++|||++++++++......++
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   84 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            45677789999999999999752      245689999876655667789999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCC----------CCcCCHHHHH----------------hhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLY----------TEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~----------~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      |+||+++++|.++|.....          ...+++.+++                .|+|+||+|+|
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~N  150 (288)
T cd05093          85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRN  150 (288)
T ss_pred             EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcce
Confidence            9999999999999975321          1236665443                57889999987

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.21  E-value=6.9e-11  Score=118.21  Aligned_cols=106  Identities=24%  Similarity=0.378  Sum_probs=88.2

Q ss_pred             ceecccCceeEEEEEEc-CCcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCCH
Q 007129          510 NKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSL  587 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~GsL  587 (617)
                      ++||+|+||.||++... +++.+|+|.+... .......|.+|+.++.+++||||+++++++......++|+||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            36999999999999986 4889999987643 234456799999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          588 NDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       588 ~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      .+++....  ..++|..                ...|+|+||+|.|
T Consensus        81 ~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~n  124 (252)
T cd05084          81 LTFLRTEG--PRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARN  124 (252)
T ss_pred             HHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchhe
Confidence            99996532  2355553                3368899999987

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.21  E-value=1.7e-11  Score=129.44  Aligned_cols=114  Identities=22%  Similarity=0.362  Sum_probs=94.5

Q ss_pred             HhccCCCCcceecccCceeEEEEEEcCCcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          501 NATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       501 ~at~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      +..+.+...+.||+|+||+||+|.+.  ..||||.|+..  +.+..++|++||.++++.+|.||+-+.|+|..++. .||
T Consensus       389 Ip~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIi  465 (678)
T KOG0193|consen  389 IPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AII  465 (678)
T ss_pred             cCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eee
Confidence            33445566779999999999999984  36999999743  45667899999999999999999999999998877 999


Q ss_pred             EeccCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ..++++-+|..+||..+.+              .-++.-+-.+|||+|||-.|
T Consensus       466 TqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnN  518 (678)
T KOG0193|consen  466 TQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNN  518 (678)
T ss_pred             ehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccc
Confidence            9999999999999975421              12566677799999999776

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.21  E-value=4.3e-11  Score=121.04  Aligned_cols=108  Identities=26%  Similarity=0.319  Sum_probs=86.0

Q ss_pred             ceecccCceeEEEEEEcC---CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCC
Q 007129          510 NKLGEGGFGPVYKGVLIE---GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNK  585 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~---g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~G  585 (617)
                      ++||+|+||.||+|...+   +..+|+|.++... ......|.+|+.++++++|||++++++++.+....++||||+++|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            368999999999998754   3579999886543 234457999999999999999999999999999999999999999


Q ss_pred             CHHHHHhcCCC--CCcCCHH----------------HHHhhhhcccccCC
Q 007129          586 SLNDFIFGFLY--TEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       586 sL~~~L~~~~~--~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +|.++|.....  ...+++.                +...++|+||||+|
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~n  130 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRN  130 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcce
Confidence            99999975321  1223433                33357889999987

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.21  E-value=6.6e-11  Score=118.63  Aligned_cols=111  Identities=28%  Similarity=0.396  Sum_probs=92.6

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      ++|...+.||+|+||.||++.. .++.||+|.++.... ..+++.+|+.++.+++|+|++++++++......++|+||++
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   83 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA   83 (256)
T ss_pred             hhccceeeeecCCCceEEEEEe-cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence            4567778999999999999987 478999999975433 56789999999999999999999999998899999999999


Q ss_pred             CCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +++|.+++..... ..++|.                +...|+|+||+|+|
T Consensus        84 ~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~N  132 (256)
T cd05039          84 KGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARN  132 (256)
T ss_pred             CCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccce
Confidence            9999999976431 234444                44477899999987

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.21  E-value=5.7e-11  Score=119.44  Aligned_cols=111  Identities=30%  Similarity=0.389  Sum_probs=91.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      ++|...++||+|+||.||++..++++.+|+|.+.... ...++|.+|+.++.+++|+|+++++++. .....++++||++
T Consensus         6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~~   83 (260)
T cd05067           6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYME   83 (260)
T ss_pred             HHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcCC
Confidence            4567778999999999999998888999999987433 3456899999999999999999999886 4567899999999


Q ss_pred             CCCHHHHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      +|+|.+++.... ...+++.+++                .|+|+||+|+|
T Consensus        84 ~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~n  132 (260)
T cd05067          84 NGSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAAN  132 (260)
T ss_pred             CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHh
Confidence            999999997643 2345555444                68889999987

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.21  E-value=3.5e-11  Score=121.61  Aligned_cols=112  Identities=25%  Similarity=0.375  Sum_probs=90.8

Q ss_pred             cCCCCcceecccCceeEEEEEEcC----CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE----GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~----g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      .+|...+.||+|+||.||+|....    ...+|+|.++... ....+.|.+|+.++.+++||||+++++++......++|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            346667899999999999998742    3379999986432 33457899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +||+++++|.+++....  ..+++.                +...|+|+||+|+|
T Consensus        84 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~n  136 (267)
T cd05066          84 TEYMENGSLDAFLRKHD--GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN  136 (267)
T ss_pred             EEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhc
Confidence            99999999999997643  234444                34468899999987

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.20  E-value=1.2e-11  Score=129.04  Aligned_cols=117  Identities=23%  Similarity=0.282  Sum_probs=98.7

Q ss_pred             HhccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeE
Q 007129          501 NATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDER  575 (617)
Q Consensus       501 ~at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~  575 (617)
                      ...++|..++.||+|+|.+|+++.-.. ++++|||++.+.   ....++-...|-.+|.+| .||.|++|+--+.+...+
T Consensus        70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL  149 (604)
T KOG0592|consen   70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL  149 (604)
T ss_pred             CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence            345778889999999999999998866 899999999753   223345677888899999 899999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+|+||+++|+|.++|..-.. +            ..|+..+...||||||||.|
T Consensus       150 YFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPEN  204 (604)
T KOG0592|consen  150 YFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPEN  204 (604)
T ss_pred             EEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhh
Confidence            999999999999999986432 1            23777899999999999988

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.20  E-value=7.1e-11  Score=123.30  Aligned_cols=108  Identities=13%  Similarity=0.206  Sum_probs=87.6

Q ss_pred             cceeccc--CceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          509 KNKLGEG--GFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       509 ~~~lG~G--~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      .++||+|  +|++||++.... ++.||+|+++...  ....+.+.+|+.+++.++||||+++++++...+..++|+||++
T Consensus         3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~   82 (327)
T cd08227           3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA   82 (327)
T ss_pred             hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence            4589999  789999998864 8899999986432  2334567889999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +|+|.+++..... ..+++.                +...|+|+||||+|
T Consensus        83 ~~~l~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~N  131 (327)
T cd08227          83 YGSAKDLICTHFM-DGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASH  131 (327)
T ss_pred             CCcHHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhh
Confidence            9999999965321 123443                45578899999998

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.20  E-value=1.2e-11  Score=130.48  Aligned_cols=112  Identities=18%  Similarity=0.202  Sum_probs=89.3

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      |...++||+|+||.||++.... ++.||||.+.... ....+.|.+|+.++.+++|+||+++++++...+..++|+||++
T Consensus        76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  155 (353)
T PLN00034         76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMD  155 (353)
T ss_pred             HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCC
Confidence            4455789999999999998764 8899999986432 2334679999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCC---------CCcCCHHHHHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLY---------TEHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~---------~~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|+|.........         -..|...+...|+|+||||+|
T Consensus       156 ~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  198 (353)
T PLN00034        156 GGSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSN  198 (353)
T ss_pred             CCcccccccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHH
Confidence            9998754322110         012445567789999999987

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.20  E-value=2e-11  Score=130.17  Aligned_cols=113  Identities=23%  Similarity=0.328  Sum_probs=95.4

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      .+..++.||.|+-|.|..|+... |+.+|||.+.+..   ........+|+.+|+-+.|||+++|+.++.+..++|||.|
T Consensus        13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE   92 (786)
T KOG0588|consen   13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE   92 (786)
T ss_pred             ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence            35567899999999999998755 9999999997542   1223457889999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+++|.|+++|..+..-             .-++..++++|+|+||||.|
T Consensus        93 yv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpEN  142 (786)
T KOG0588|consen   93 YVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPEN  142 (786)
T ss_pred             ecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchh
Confidence            99999999999876431             12567799999999999987

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.20  E-value=6.3e-11  Score=118.77  Aligned_cols=104  Identities=27%  Similarity=0.417  Sum_probs=84.2

Q ss_pred             ceecccCceeEEEEEEcCCc-----------EEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          510 NKLGEGGFGPVYKGVLIEGQ-----------EIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~g~-----------~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      +.||+|+||.||+|...+..           .+++|.+...... ...|.+|+.++++++|||++++++++.. ...++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            37999999999999986532           4788877543322 6789999999999999999999999988 778999


Q ss_pred             EeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +||+++|+|.+++.....  .+++.                +...|+|+||||+|
T Consensus        79 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~N  131 (259)
T cd05037          79 EEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKN  131 (259)
T ss_pred             EEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccce
Confidence            999999999999986532  34444                33468999999998

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.20  E-value=6.9e-11  Score=121.96  Aligned_cols=113  Identities=26%  Similarity=0.352  Sum_probs=91.8

Q ss_pred             cCCCCcceecccCceeEEEEEEc------CCcEEEEeecccCc-hhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKSS-GQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDER  575 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~------~g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~  575 (617)
                      ++|...++||+|+||.||++...      .+..||||+++... ....+.+.+|+.++.++ +|+||+++++++...+..
T Consensus        35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~  114 (302)
T cd05055          35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI  114 (302)
T ss_pred             HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence            56777889999999999999752      24579999987542 33456799999999999 799999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++++||+++|+|.+++.... ...+++.                +...|+|+||+|+|
T Consensus       115 ~lv~e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~N  171 (302)
T cd05055         115 LVITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN  171 (302)
T ss_pred             EEEEEcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccce
Confidence            99999999999999997643 2224544                44468999999988

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.20  E-value=3.1e-11  Score=127.08  Aligned_cols=113  Identities=22%  Similarity=0.260  Sum_probs=93.0

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      +|...++||+|+||.||++.... ++.||+|.++...   ....+.+.+|+.++..++|+||+++++++.+.+..++|+|
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (350)
T cd05573           2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME   81 (350)
T ss_pred             CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence            56777899999999999999864 8899999986431   2345678999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+++|+|.+++..... .            ..|...+...|+|+||||+|
T Consensus        82 ~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~N  131 (350)
T cd05573          82 YMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDN  131 (350)
T ss_pred             CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH
Confidence            9999999999976521 0            01233356678999999987

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.20  E-value=3.5e-11  Score=121.63  Aligned_cols=110  Identities=25%  Similarity=0.402  Sum_probs=90.4

Q ss_pred             CCCcceecccCceeEEEEEEcC-C---cEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-G---QEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g---~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      +...+.||+|+||.||+|.... +   ..||+|.+... .....++|..|+.++++++|||++++.+++......++|+|
T Consensus         6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e   85 (269)
T cd05065           6 VKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITE   85 (269)
T ss_pred             eEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEe
Confidence            5566899999999999999864 3   36999998753 34456789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      |+++|+|.+++....  ..+++.+                ...++|+||+|+|
T Consensus        86 ~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~n  136 (269)
T cd05065          86 FMENGALDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARN  136 (269)
T ss_pred             cCCCCcHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChhe
Confidence            999999999997643  2345543                3467789999987

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.20  E-value=1e-10  Score=117.48  Aligned_cols=113  Identities=27%  Similarity=0.421  Sum_probs=94.2

Q ss_pred             ccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      .++|...++||+|+||.||++...+++.+|||.+... ....+++.+|+.++.+++|+|++++++++......++|+||+
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   83 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPG-TMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM   83 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCC-ccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence            4567778899999999999999877888999998643 234578999999999999999999999999888999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      ++++|.+++.... ...++|.+                ...|+|+||+|+|
T Consensus        84 ~~~~L~~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~n  133 (261)
T cd05034          84 SKGSLLDFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARN  133 (261)
T ss_pred             CCCCHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchhe
Confidence            9999999997643 22355543                3468889999987

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.20  E-value=3.6e-11  Score=124.81  Aligned_cols=111  Identities=26%  Similarity=0.427  Sum_probs=89.1

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-Cc----EEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQ----EIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~----~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      .+|...+.||+|+||.||+|.... +.    .||+|.++... ....++|.+|+.++..++||||++++|+|... ...+
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            457778899999999999998743 33    48999987443 34457899999999999999999999999764 5679


Q ss_pred             EEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++||+++|+|.+++.....  .+++.                +...|+|+||||+|
T Consensus        86 v~e~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~N  139 (316)
T cd05108          86 ITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARN  139 (316)
T ss_pred             eeecCCCCCHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhh
Confidence            9999999999999986432  23333                44578899999998

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.20  E-value=5.8e-11  Score=120.66  Aligned_cols=114  Identities=31%  Similarity=0.530  Sum_probs=92.4

Q ss_pred             cCCCCcceecccCceeEEEEEEcC------CcEEEEeecccCchh-hHHHHHHHHHHHHccCCCcccceEEEEEeCCeEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE------GQEIAAKRLSKSSGQ-GMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERM  576 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~------g~~vAvK~l~~~~~~-~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~  576 (617)
                      .+|...+.||+|+||.||++...+      +..||||.+...... ..+.|.+|+.++.+++|+|++++++++......+
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            346667899999999999998743      468999998754433 4578999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCCC-----------CCcCCHH----------------HHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLY-----------TEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~-----------~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +|+||+++|+|.++|.....           ...+.+.                +...|+|+||+|+|
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~n  152 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRN  152 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccce
Confidence            99999999999999975421           1223443                44578899999987

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.20  E-value=3.8e-11  Score=132.02  Aligned_cols=112  Identities=18%  Similarity=0.111  Sum_probs=90.6

Q ss_pred             CCCcceecccCceeEEEEEEcC--CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE--GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~--g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      |...+.||+|+||.||++....  +..||+|.+..........+.+|+.+++.++|||||++++++...+..+|||||++
T Consensus        69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~  148 (478)
T PTZ00267         69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS  148 (478)
T ss_pred             EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence            6667899999999999997643  56788887755444455678899999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCC-CCcCC----------------HHHHHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLY-TEHFF----------------WSFFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~-~~~l~----------------w~~r~~i~~~~~~~~n  617 (617)
                      +|+|.++|..... ...++                ..+...|+|+||||+|
T Consensus       149 gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~N  199 (478)
T PTZ00267        149 GGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSAN  199 (478)
T ss_pred             CCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHh
Confidence            9999998865311 22233                3355579999999998

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.19  E-value=4.2e-11  Score=122.63  Aligned_cols=113  Identities=23%  Similarity=0.288  Sum_probs=90.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ++|...++||+|+||.||++.... ++.||+|.++... ......+.+|+.++.+++||||+++++++......++|+||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            457777899999999999998864 7899999986432 23345788999999999999999999999988899999999


Q ss_pred             cCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++ |+|.+++......              ..|..-+...|+|+||||+|
T Consensus        85 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~N  133 (288)
T cd07871          85 LD-SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQN  133 (288)
T ss_pred             CC-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH
Confidence            97 5999998654211              01233355689999999987

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.19  E-value=9.1e-11  Score=119.51  Aligned_cols=114  Identities=27%  Similarity=0.469  Sum_probs=93.1

Q ss_pred             cCCCCcceecccCceeEEEEEEc------CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~------~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      .++...++||+|+||.||++...      .+..+|+|.+........+.|.+|+.++..++|+||+++++++......++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            34556679999999999999742      256799999887666667889999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCC------------CCcCCHH----------------HHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLY------------TEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~------------~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++||+++|+|.++|.....            ...++|.                +...|+|+||+|+|
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~n  152 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRN  152 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhh
Confidence            9999999999999976421            1224444                44577899999987

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.19  E-value=7.3e-11  Score=118.43  Aligned_cols=110  Identities=26%  Similarity=0.396  Sum_probs=90.6

Q ss_pred             CCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      +|...+.||+|+||.||++....+..+|+|.+.... ...++|.+|+.++.+++|+|++++++++......++|+||+++
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN   83 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence            356678999999999999988777789999886432 2346789999999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      ++|.+++.....  .++|..                ...|+|+||+|+|
T Consensus        84 ~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~n  130 (256)
T cd05059          84 GCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARN  130 (256)
T ss_pred             CCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhh
Confidence            999999975432  344443                3457889999987

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.19  E-value=2.7e-11  Score=124.59  Aligned_cols=115  Identities=21%  Similarity=0.237  Sum_probs=88.6

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--------------hhhHHHHHHHHHHHHccCCCcccceEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--------------GQGMEEFENEVLLIAKLQHRNLVKLIG  567 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--------------~~~~~~f~~Ev~~l~~l~H~nlv~l~g  567 (617)
                      .+.|...++||+|.||.|-++.-.. ++.||||.+.+..              ....+...+|+.+|++++|||||+|+.
T Consensus        96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE  175 (576)
T KOG0585|consen   96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE  175 (576)
T ss_pred             hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence            4678888899999999999998654 8999999996421              112367899999999999999999999


Q ss_pred             EEEeC--CeEEEEEeccCCCCHHHHHhcCC-C------------CCcCCHHHHHhhhhcccccCC
Q 007129          568 CCTQR--DERMLIYEYLPNKSLNDFIFGFL-Y------------TEHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       568 ~~~~~--~~~~lv~E~~~~GsL~~~L~~~~-~------------~~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +-.++  ..+|||+|||..|.+...=-+.. .            -.-|..-+--.||||||||+|
T Consensus       176 vLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsN  240 (576)
T KOG0585|consen  176 VLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSN  240 (576)
T ss_pred             eecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhh
Confidence            88664  56899999999998753321111 0            012556677799999999998

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.19  E-value=1.2e-10  Score=116.59  Aligned_cols=112  Identities=21%  Similarity=0.232  Sum_probs=92.4

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeeccc--CchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSK--SSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~--~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      +|+..+.||+|+||.||++.... +..+++|.+..  ......+++.+|+.++++++|||++++++++.+....++|+||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            35666899999999999999864 88999998863  2344567899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      +++++|.++|.... ...+++.+                ...|+|+||+|+|
T Consensus        81 ~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~n  131 (256)
T cd08529          81 AENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLN  131 (256)
T ss_pred             CCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcce
Confidence            99999999998642 22344443                3367889999987

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.19  E-value=8.5e-11  Score=120.28  Aligned_cols=116  Identities=22%  Similarity=0.356  Sum_probs=91.5

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC------CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCe
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE------GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDE  574 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~------g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~  574 (617)
                      .+++|...++||+|+||.||+|...+      +..||+|.+.... .....++.+|+.++..++|+|++++++++.....
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP   83 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            34567778899999999999997642      4579999886432 2334578899999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcCCC-------CCcCC----------------HHHHHhhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLY-------TEHFF----------------WSFFFSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~-------~~~l~----------------w~~r~~i~~~~~~~~n  617 (617)
                      .++||||+++|+|.++|.....       ...++                ..+...|+|+||+|+|
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~n  149 (288)
T cd05061          84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARN  149 (288)
T ss_pred             cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChhe
Confidence            9999999999999999975321       11222                2345578999999988

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.19  E-value=7.9e-11  Score=119.73  Aligned_cols=115  Identities=27%  Similarity=0.459  Sum_probs=93.6

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC------CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE------GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDER  575 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~------g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~  575 (617)
                      +++|...+.||+|+||.||++....      +..||+|.+.... ......|.+|+.++++++|+||+++++++.+....
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR   84 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence            4567778899999999999998854      4578999886433 33456799999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCCC----CCcCCHHHHH----------------hhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLY----TEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~----~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      ++|+||+++++|.+++.....    ...++|..++                .|+|+||+|+|
T Consensus        85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~n  146 (277)
T cd05036          85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARN  146 (277)
T ss_pred             EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhe
Confidence            999999999999999976431    1246665544                47899999987

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.19  E-value=6e-11  Score=121.57  Aligned_cols=112  Identities=24%  Similarity=0.362  Sum_probs=94.4

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      +.|...++||+|+||.||++.... +..+++|.+........+.+.+|+.++++++|+|++++++++......++||||+
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   91 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC   91 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence            446667799999999999999865 8899999997666666788999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++++|..++.....  .+++.                +...|+|+||+|+|
T Consensus        92 ~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~N  140 (292)
T cd06644          92 PGGAVDAIMLELDR--GLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGN  140 (292)
T ss_pred             CCCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcce
Confidence            99999988865321  23443                44578999999988

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.19  E-value=5.1e-11  Score=124.18  Aligned_cols=108  Identities=22%  Similarity=0.224  Sum_probs=87.4

Q ss_pred             ceecccCceeEEEEEEc----CCcEEEEeecccCc----hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          510 NKLGEGGFGPVYKGVLI----EGQEIAAKRLSKSS----GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~----~g~~vAvK~l~~~~----~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      +.||+|+||.||++...    .++.||+|.++...    ......+.+|+.++..++||||+++++++...+..++||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            58999999999999763    47889999986421    22335678999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +++|+|.+++.....-             ..|..-+...|+|+||||+|
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~N  130 (323)
T cd05584          82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPEN  130 (323)
T ss_pred             CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH
Confidence            9999999998654310             11344466789999999987

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.19  E-value=8.3e-11  Score=119.88  Aligned_cols=106  Identities=25%  Similarity=0.280  Sum_probs=85.4

Q ss_pred             ecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCCH
Q 007129          512 LGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSL  587 (617)
Q Consensus       512 lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~GsL  587 (617)
                      ||+|+||.||++.... ++.+|+|.+....   ....+.+..|+.++.+++|+|++++.+++......++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            6999999999998764 8899999986432   22346778999999999999999999999999999999999999999


Q ss_pred             HHHHhcCC-CCCcCCHH----------------HHHhhhhcccccCC
Q 007129          588 NDFIFGFL-YTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       588 ~~~L~~~~-~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ..++.... ....+++.                +...|+|+||+|+|
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N  127 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPEN  127 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH
Confidence            99886432 12234444                44578899999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.19  E-value=3.7e-11  Score=122.21  Aligned_cols=112  Identities=22%  Similarity=0.306  Sum_probs=94.1

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      ++|...++||+|+||.||++.... +..+|+|.+........+.|.+|+.++++++|+|++++++.+..+...++|+||+
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC   84 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence            456777899999999999999864 7899999987655566678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCH----------------HHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      ++++|.+++.....  .+++                -+...|+|+||+|+|
T Consensus        85 ~~~~L~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~n  133 (280)
T cd06611          85 DGGALDSIMLELER--GLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGN  133 (280)
T ss_pred             CCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhh
Confidence            99999999875421  2333                344578999999987

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.19  E-value=9.9e-11  Score=122.12  Aligned_cols=108  Identities=19%  Similarity=0.101  Sum_probs=86.6

Q ss_pred             ceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCC
Q 007129          510 NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNK  585 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~G  585 (617)
                      +.||+|+||.||++.... ++.||+|.++..   ......++..|+.++..++||||+++.+++......++||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            369999999999998754 889999998643   2234467889999999999999999999999999999999999999


Q ss_pred             CHHHHHhcCCCC-------------CcCCHHHH-HhhhhcccccCC
Q 007129          586 SLNDFIFGFLYT-------------EHFFWSFF-FSFENLSLVDRN  617 (617)
Q Consensus       586 sL~~~L~~~~~~-------------~~l~w~~r-~~i~~~~~~~~n  617 (617)
                      +|..++.....-             ..|...+. ..|+|+||||+|
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~N  126 (325)
T cd05594          81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLEN  126 (325)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCe
Confidence            999998654310             01222233 579999999998

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.18  E-value=5.4e-11  Score=122.70  Aligned_cols=114  Identities=22%  Similarity=0.286  Sum_probs=91.5

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch-hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG-QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~-~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      .++|...++||+|+||.||++.... ++.||+|.+..... .....+.+|+.++++++||||+++++++......++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            3567778899999999999999864 88999999864332 223567899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |++ ++|.+++......              ..|..-+...|+|+||||+|
T Consensus        84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~N  133 (303)
T cd07869          84 YVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQN  133 (303)
T ss_pred             CCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH
Confidence            995 7888888654211              11334456689999999987

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.18  E-value=5.8e-11  Score=124.13  Aligned_cols=108  Identities=16%  Similarity=0.148  Sum_probs=87.3

Q ss_pred             ceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          510 NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      +.||+|+||.||++.... ++.||+|.++..   .....+.+..|..++.++ +||||+++++++......++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            379999999999998865 789999999743   223346688999999888 799999999999999999999999999


Q ss_pred             CCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+|.+++..... .            ..|..-+...|+|+||+|+|
T Consensus        81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~N  126 (329)
T cd05588          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDN  126 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHH
Confidence            999998865431 0            11334455688999999987

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.18  E-value=4.9e-11  Score=121.89  Aligned_cols=114  Identities=16%  Similarity=0.229  Sum_probs=98.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ++|...++||.|.-+.||++.... +..||||++.-. .....+++++|+..|..++||||++.+..+..+.++++||.|
T Consensus        26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpf  105 (516)
T KOG0582|consen   26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPF  105 (516)
T ss_pred             cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehh
Confidence            557777899999999999998754 889999999733 234468999999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCC---------------CcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYT---------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~---------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |..||+.+.|...-..               +.|+.-++..-|||||||.|
T Consensus       106 Ma~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgn  156 (516)
T KOG0582|consen  106 MAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGN  156 (516)
T ss_pred             hcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceeccccccc
Confidence            9999999998754211               24788899999999999987

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.18  E-value=1e-10  Score=119.54  Aligned_cols=111  Identities=24%  Similarity=0.263  Sum_probs=89.5

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      |...+.||+|+||.||++.... ++.+|+|.+....   ....+.+.+|+.++..++|+|++++.+++..++..++++||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            4456789999999999998864 8899999986432   22335678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      +++++|.+++.... ...+++..                ...|+|+||+|+|
T Consensus        82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~N  132 (285)
T cd05632          82 MNGGDLKFHIYNMG-NPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPEN  132 (285)
T ss_pred             ccCccHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHH
Confidence            99999999987543 22345553                4468899999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.18  E-value=6.1e-11  Score=123.99  Aligned_cols=108  Identities=17%  Similarity=0.151  Sum_probs=86.5

Q ss_pred             ceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          510 NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      +.||+|+||.||++.... ++.+|+|.++..   .....+.+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            379999999999999865 789999998743   223445688898888776 899999999999999999999999999


Q ss_pred             CCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+|..++.....-             ..|.+-+...|+|+||||+|
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~N  126 (329)
T cd05618          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDN  126 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHH
Confidence            9999988654310             01333455688999999987

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.18  E-value=1.6e-10  Score=116.47  Aligned_cols=109  Identities=25%  Similarity=0.447  Sum_probs=89.6

Q ss_pred             CCCcceecccCceeEEEEEEcCCcEEEEeecccCc------hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSS------GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~------~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      |...+.||+|+||.||++....++.+|+|.++...      ....+.+.+|+.++++++|+|++++++++.+....++++
T Consensus         2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   81 (265)
T cd06631           2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM   81 (265)
T ss_pred             ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence            45567999999999999988778999999886321      122356899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ||+++++|.+++....   .+.+.                +...|+|+||+|+|
T Consensus        82 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~n  132 (265)
T cd06631          82 EFVPGGSISSILNRFG---PLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNN  132 (265)
T ss_pred             ecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHh
Confidence            9999999999997542   12333                34478999999987

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.18  E-value=5.3e-11  Score=121.48  Aligned_cols=113  Identities=19%  Similarity=0.248  Sum_probs=92.3

Q ss_pred             CCCCcceecccCceeEEEEEEc-CCcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      +|...+.||+|+||.||++... .+..+|+|.+... .....+++.+|+.++.+++|+|++++++.+...+..++|+||+
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence            4566779999999999999986 4889999988643 3344578999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHHH-----------------HHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWSF-----------------FFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~~-----------------r~~i~~~~~~~~n  617 (617)
                      ++++|..++........+++..                 ...|+|+||+|+|
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~n  133 (286)
T cd06622          82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTN  133 (286)
T ss_pred             CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHH
Confidence            9999999987642222345542                 2468899999987

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.17  E-value=6.2e-11  Score=124.64  Aligned_cols=91  Identities=23%  Similarity=0.425  Sum_probs=74.9

Q ss_pred             cCCCCcceecccCceeEEEEEE------cCCcEEEEeecccCc-hhhHHHHHHHHHHHHcc-CCCcccceEEEEEeC-Ce
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVL------IEGQEIAAKRLSKSS-GQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQR-DE  574 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l------~~g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~-~~  574 (617)
                      ++|...+.||+|+||.||++..      ..++.||||.++... ......+.+|+.++.++ +|+||+++++++... ..
T Consensus         7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~   86 (343)
T cd05103           7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP   86 (343)
T ss_pred             hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence            4577788999999999999973      236789999997532 33456789999999999 789999999988654 56


Q ss_pred             EEEEEeccCCCCHHHHHhcC
Q 007129          575 RMLIYEYLPNKSLNDFIFGF  594 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~  594 (617)
                      .++++||+++|+|.++|...
T Consensus        87 ~~lv~ey~~~g~L~~~i~~~  106 (343)
T cd05103          87 LMVIVEFCKFGNLSNYLRSK  106 (343)
T ss_pred             eEEEEeccCCCcHHHHHHhc
Confidence            78999999999999999753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.17  E-value=4.7e-11  Score=122.06  Aligned_cols=91  Identities=30%  Similarity=0.541  Sum_probs=78.7

Q ss_pred             ccCCCCcceecccCceeEEEEEEc------CCcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDER  575 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~------~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~  575 (617)
                      .++|...++||+|+||.||++...      .+..+|+|.+... .....++|.+|+.++++++|||++++++++......
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            456788889999999999999864      3578999998643 234457899999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhc
Q 007129          576 MLIYEYLPNKSLNDFIFG  593 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~  593 (617)
                      ++++||+++|+|.++|..
T Consensus        84 ~lv~e~~~~~~L~~~l~~  101 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRH  101 (288)
T ss_pred             EEEEecCCCCCHHHHHHH
Confidence            999999999999999975

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.17  E-value=9.9e-11  Score=119.96  Aligned_cols=113  Identities=28%  Similarity=0.485  Sum_probs=92.5

Q ss_pred             CCCCcceecccCceeEEEEEEc------CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~------~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      +|...+.||+|+||.||++...      +...+++|.+........+.|.+|+.++.+++|+|++++++++......++|
T Consensus         6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   85 (291)
T cd05094           6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMV   85 (291)
T ss_pred             HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEE
Confidence            4566679999999999999753      2456899998765555567899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCC-------------CCcCCHHHHH----------------hhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLY-------------TEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~-------------~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      |||+++++|.+++.....             ...++|..+.                .|+|+||+|+|
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~N  153 (291)
T cd05094          86 FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRN  153 (291)
T ss_pred             EecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcce
Confidence            999999999999975421             1236666444                67889999988

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.17  E-value=7.6e-11  Score=121.29  Aligned_cols=114  Identities=24%  Similarity=0.358  Sum_probs=93.4

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      .+|...+.||+|+||.||++... .++.||+|.+........+.+.+|+.+++.++|+|++++++++..+...++|+||+
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   98 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   98 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence            45777789999999999999874 48899999997554455577899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++++|.+++......            ..|..-+...|+|+||+|+|
T Consensus        99 ~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~N  145 (297)
T cd06656          99 AGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDN  145 (297)
T ss_pred             CCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH
Confidence            999999998653211            01233344578999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.17  E-value=8.4e-11  Score=122.44  Aligned_cols=108  Identities=22%  Similarity=0.209  Sum_probs=86.5

Q ss_pred             ceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          510 NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      ++||+|+||.||++.... ++.||+|.++..   .....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            369999999999999865 789999998643   223445678898888866 799999999999999999999999999


Q ss_pred             CCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+|..++.....-             ..|..-++..|+|+||||+|
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~N  126 (321)
T cd05591          81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDN  126 (321)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH
Confidence            9999998754310             01233356689999999987

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.17  E-value=1.1e-10  Score=117.61  Aligned_cols=111  Identities=27%  Similarity=0.397  Sum_probs=89.3

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      +.|...++||+|+||.||++...+...||+|.++.. ....++|.+|+.++..++|+|++++++++. ....++|+||++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~   83 (262)
T cd05071           6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS   83 (262)
T ss_pred             HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccC-ccCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCC
Confidence            446777899999999999998877778999999743 223467999999999999999999999874 456789999999


Q ss_pred             CCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +|+|.+++.... ...++|.                ++..|+|+||+|+|
T Consensus        84 ~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~N  132 (262)
T cd05071          84 KGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN  132 (262)
T ss_pred             CCcHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCccc
Confidence            999999997542 1223333                55578899999988

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.17  E-value=1e-10  Score=121.59  Aligned_cols=108  Identities=23%  Similarity=0.202  Sum_probs=85.9

Q ss_pred             ceecccCceeEEEEEEc----CCcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          510 NKLGEGGFGPVYKGVLI----EGQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~----~g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      +.||+|+||.||++...    .++.+|+|.+....  ......+..|+.++.+++||||+++++++...+..++|+||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            57999999999988752    47899999987432  2234567889999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|+|.+++.....-             ..|...+...|+|+||+|+|
T Consensus        82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N  128 (318)
T cd05582          82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPEN  128 (318)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHH
Confidence            99999999654210             01223355678999999987

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.17  E-value=1.8e-11  Score=120.84  Aligned_cols=113  Identities=21%  Similarity=0.291  Sum_probs=88.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch-hhH-HHHHHHHHHHHccCCCcccceEEEEEe--CCeEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG-QGM-EEFENEVLLIAKLQHRNLVKLIGCCTQ--RDERMLI  578 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~-~~~-~~f~~Ev~~l~~l~H~nlv~l~g~~~~--~~~~~lv  578 (617)
                      +.|...+.|++|.||.||+|..+. ++.||+|+++.... .+. -.-++||.++.+++|||||.+.-+...  -+..+||
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V  155 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV  155 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence            446667899999999999999865 88999999974321 111 235789999999999999999876654  3568999


Q ss_pred             EeccCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||||++ +|...|...+++              +-+...+..=|+|||||++|
T Consensus       156 Me~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SN  207 (419)
T KOG0663|consen  156 MEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSN  207 (419)
T ss_pred             HHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhh
Confidence            999987 899998876532              11455577789999999998

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.17  E-value=1.5e-10  Score=116.30  Aligned_cols=111  Identities=26%  Similarity=0.381  Sum_probs=89.7

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      ++|...++||+|+||.||++....+..+|+|.+.... ...+.|.+|+.++.+++|+|++++++++. ....+++|||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~   83 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT-MSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS   83 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecCCceeEEEEecCCC-CCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence            3456678999999999999998878889999986532 23467999999999999999999999874 566889999999


Q ss_pred             CCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      +++|.+++.+.. ...+++.+                ...|+|+||+|.|
T Consensus        84 ~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~N  132 (260)
T cd05070          84 KGSLLDFLKDGE-GRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSAN  132 (260)
T ss_pred             CCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccce
Confidence            999999997643 22355543                3357899999987

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.16  E-value=6.2e-11  Score=125.83  Aligned_cols=115  Identities=22%  Similarity=0.279  Sum_probs=97.7

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ...|....+||+|.|++|..+.... +..||+|.+++..  ....+.+.+|+.+|..+.|||||+|+.+......+++|+
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~  134 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM  134 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence            4556777899999999999998865 8999999997643  333456899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||..+|.+++||..+.+-             ..++..++-.|+|+|||+.|
T Consensus       135 eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eN  185 (596)
T KOG0586|consen  135 EYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAEN  185 (596)
T ss_pred             EeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhh
Confidence            999999999999865431             23566688899999999987

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.16  E-value=1.7e-10  Score=116.04  Aligned_cols=111  Identities=26%  Similarity=0.338  Sum_probs=90.7

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      +.+...++||+|+||.||++....+..+|+|.+... ....+.|.+|+.++++++|+|++++.+++.. ...++++||++
T Consensus         6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~   83 (260)
T cd05073           6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMA   83 (260)
T ss_pred             cceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCC
Confidence            456777899999999999999877788999988643 3345789999999999999999999999877 77899999999


Q ss_pred             CCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      +|+|.+++.... ...++|.+                ...++|+||+|+|
T Consensus        84 ~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~n  132 (260)
T cd05073          84 KGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAAN  132 (260)
T ss_pred             CCcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcce
Confidence            999999997643 22345543                3367889999987

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.16  E-value=7.8e-11  Score=120.99  Aligned_cols=114  Identities=27%  Similarity=0.417  Sum_probs=90.3

Q ss_pred             cCCCCcceecccCceeEEEEEEcC---------------CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE---------------GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIG  567 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~---------------g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g  567 (617)
                      +.|...++||+|+||.||++....               ...||+|.++.. .....+.|.+|++++.+++|+|++++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            456677899999999999987532               235899998653 3344568999999999999999999999


Q ss_pred             EEEeCCeEEEEEeccCCCCHHHHHhcCCCC---------CcCCHH----------------HHHhhhhcccccCC
Q 007129          568 CCTQRDERMLIYEYLPNKSLNDFIFGFLYT---------EHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       568 ~~~~~~~~~lv~E~~~~GsL~~~L~~~~~~---------~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++...+..++||||+++++|.++|......         ..++|.                +...|+|+||+|+|
T Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~N  159 (295)
T cd05097          85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRN  159 (295)
T ss_pred             EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhh
Confidence            999999999999999999999999653210         123443                44577899999988

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.16  E-value=1.5e-10  Score=117.75  Aligned_cols=105  Identities=20%  Similarity=0.237  Sum_probs=84.6

Q ss_pred             ecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCCH
Q 007129          512 LGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSL  587 (617)
Q Consensus       512 lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~GsL  587 (617)
                      ||+|+||.||++.... |+.+|+|.+....   ......+..|+.++.+++||||+++.+++....+.++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            6999999999998865 8999999986321   12234567799999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          588 NDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       588 ~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      .+++.... ...+++..                ...|+|+||+|+|
T Consensus        81 ~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~N  125 (277)
T cd05607          81 KYHIYNVG-ERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPEN  125 (277)
T ss_pred             HHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHh
Confidence            99886543 22355553                3467889999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.16  E-value=5e-11  Score=121.74  Aligned_cols=113  Identities=21%  Similarity=0.278  Sum_probs=89.3

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      +|...+.||+|+||.||++.... ++.+|+|++....  ....+.+.+|+.++.+++||||+++++++...+..++|+||
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY   81 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence            57777899999999999999865 7889999986432  23346788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++++.|..+...... .            ..|.+.+...|+|+||||+|
T Consensus        82 ~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~N  130 (287)
T cd07848          82 VEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPEN  130 (287)
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH
Confidence            998877655432211 0            11334456689999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.16  E-value=9.4e-11  Score=119.64  Aligned_cols=111  Identities=16%  Similarity=0.175  Sum_probs=90.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ++|...++||+|+||.||++.... ++.+|+|.+.... ....++|.+|++++..++||||+++++++......+||+||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            345566799999999999998764 8889999876432 34457899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHHH-----------------HHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWSF-----------------FFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~~-----------------r~~i~~~~~~~~n  617 (617)
                      +++++|.+++....   .++|..                 +..|+|+||+|+|
T Consensus        85 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~n  134 (284)
T cd06620          85 MDCGSLDRIYKKGG---PIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSN  134 (284)
T ss_pred             CCCCCHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHH
Confidence            99999999886532   233332                 2358899999876

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.15  E-value=1.5e-10  Score=119.04  Aligned_cols=110  Identities=24%  Similarity=0.388  Sum_probs=92.2

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      .+|...++||.|+||.||++... .++.||+|.+........+.+.+|+.+++.++|+|++++++++......++|+||+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            34777789999999999999864 48899999987554445678899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      ++++|.+++.+.    .++|.++.                .|+|+||+|+|
T Consensus        99 ~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~N  145 (296)
T cd06655          99 AGGSLTDVVTET----CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDN  145 (296)
T ss_pred             CCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH
Confidence            999999998653    24555433                57889999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.15  E-value=6.7e-11  Score=123.34  Aligned_cols=111  Identities=23%  Similarity=0.243  Sum_probs=85.4

Q ss_pred             CCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHH---HccCCCcccceEEEEEeCCeEEEEE
Q 007129          507 SDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLI---AKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       507 ~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l---~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ...+.||+|+||.||++.... ++.||||.++...   ....+.+.+|+.++   ..++||||+++++++...+..++||
T Consensus         2 ~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~   81 (324)
T cd05589           2 RCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVM   81 (324)
T ss_pred             eEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEE
Confidence            446789999999999998864 8899999986431   23345667776554   5678999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|..++......            ..|..-+...|+|+||||+|
T Consensus        82 E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~N  131 (324)
T cd05589          82 EYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDN  131 (324)
T ss_pred             cCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHH
Confidence            999999999988653211            01222355678999999987

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.15  E-value=1.9e-10  Score=116.29  Aligned_cols=112  Identities=28%  Similarity=0.436  Sum_probs=88.5

Q ss_pred             CCCcceecccCceeEEEEEEcC----CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCe-----
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE----GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDE-----  574 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~----g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~-----  574 (617)
                      |...+.||+|+||.||++....    +..||+|+++..  .....+++.+|+..+..++|+|++++++++...+.     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            3456789999999999998753    367999998743  23445789999999999999999999999877554     


Q ss_pred             -EEEEEeccCCCCHHHHHhcCC---CCCcCCHH----------------HHHhhhhcccccCC
Q 007129          575 -RMLIYEYLPNKSLNDFIFGFL---YTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       575 -~~lv~E~~~~GsL~~~L~~~~---~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                       .++++||+++|+|..++....   ....+++.                +...|+|+||||+|
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~N  143 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARN  143 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhe
Confidence             789999999999999996542   12235544                44578999999988

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.15  E-value=1e-10  Score=120.64  Aligned_cols=114  Identities=29%  Similarity=0.470  Sum_probs=90.8

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-Cc--EEEEeecccC-chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQ--EIAAKRLSKS-SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~--~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      ++|...+.||+|+||.||++.... +.  .+|+|.++.. .....++|.+|+.++.++ +|+||+++++++...+..++|
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv   86 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   86 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence            456777899999999999998754 43  4688877643 334557899999999999 899999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCC-------------CCcCCHH----------------HHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLY-------------TEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~-------------~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +||+++|+|.++|.....             ...+++.                +...|+|+||+|+|
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~N  154 (303)
T cd05088          87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARN  154 (303)
T ss_pred             EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchhe
Confidence            999999999999975421             1123333                55578899999988

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.15  E-value=6.7e-11  Score=119.97  Aligned_cols=114  Identities=21%  Similarity=0.232  Sum_probs=95.4

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      +.|...+.||.|.-|+||.+.+.+ +...|+|.+.+..   +......+.|-++|+.++||-|+.|++.+......+|+|
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence            345556789999999999999976 6889999997642   344556778889999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCC---------------cCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTE---------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~---------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      |||++|+|+..++....+.               .|+.-+-+.||=|||||.|
T Consensus       157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPEN  209 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPEN  209 (459)
T ss_pred             ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcce
Confidence            9999999999998754322               2566677788999999988

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.15  E-value=1.9e-10  Score=118.21  Aligned_cols=114  Identities=28%  Similarity=0.447  Sum_probs=90.8

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-Cc--EEEEeecccC-chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQ--EIAAKRLSKS-SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~--~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      ++|...+.||+|+||.||++...+ +.  .+++|.++.. .....+.|.+|+.++.++ +|||++++++++......+++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            456777899999999999998865 33  4788888743 334457899999999999 799999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCC-------------CCcCCHH----------------HHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLY-------------TEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~-------------~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +||+++|+|.++|.....             ...+.+.                +...|+|+||+|+|
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~N  149 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARN  149 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcce
Confidence            999999999999975321             1124444                33478999999988

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.15  E-value=7.1e-11  Score=114.93  Aligned_cols=114  Identities=24%  Similarity=0.283  Sum_probs=96.6

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch---hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG---QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~---~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      .+|...+.||.|+||.|...+.+. |..+|+|.|++..-   ...+...+|..++..+.||.+++|.+-+.+...++|||
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            457777899999999999998876 78899999975432   33456788999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||.++|.|+.+|+...+ .            ..|+.-+-..|+-|||||.|
T Consensus       124 eyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPEN  174 (355)
T KOG0616|consen  124 EYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPEN  174 (355)
T ss_pred             eccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHH
Confidence            99999999999997543 1            13666778899999999987

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.15  E-value=2.2e-10  Score=116.76  Aligned_cols=109  Identities=23%  Similarity=0.334  Sum_probs=91.2

Q ss_pred             CCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCC
Q 007129          507 SDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNK  585 (617)
Q Consensus       507 ~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~G  585 (617)
                      ...++||+|+||.||++.... +..+++|.+........+.|.+|+.++..++|+|++++++++...+..++|+||++++
T Consensus         8 ~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~   87 (282)
T cd06643           8 EIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGG   87 (282)
T ss_pred             HHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCC
Confidence            344689999999999999865 7788999987655666788999999999999999999999999999999999999999


Q ss_pred             CHHHHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          586 SLNDFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       586 sL~~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      +|..++....  ..++|..+.                .|+|+||+|+|
T Consensus        88 ~l~~~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~n  133 (282)
T cd06643          88 AVDAVMLELE--RPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGN  133 (282)
T ss_pred             cHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCccc
Confidence            9999887532  235555433                57789999987

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.15  E-value=1.6e-10  Score=118.13  Aligned_cols=111  Identities=24%  Similarity=0.261  Sum_probs=89.5

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      |...+.||+|+||.||++.... ++.+|+|.+....   ....+.+.+|+.++.+++|++++.+.+.+...+..++|+||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            4556789999999999998865 8899999986432   22335678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCC----------------HHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFF----------------WSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~----------------w~~r~~i~~~~~~~~n  617 (617)
                      +++|+|.+++..... ..++                .-+...|+|+||+|+|
T Consensus        82 ~~g~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~N  132 (285)
T cd05630          82 MNGGDLKFHIYHMGE-AGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPEN  132 (285)
T ss_pred             cCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHH
Confidence            999999999865321 1233                3345578999999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.15  E-value=1.1e-10  Score=119.94  Aligned_cols=114  Identities=27%  Similarity=0.427  Sum_probs=90.8

Q ss_pred             cCCCCcceecccCceeEEEEEEc-----------------CCcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccce
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-----------------EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKL  565 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-----------------~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l  565 (617)
                      ++|+..++||+|+||.||++...                 ++..+|+|.+... .....++|.+|+.++.+++|+|++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~   84 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL   84 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            45777889999999999987532                 1346899998743 33445789999999999999999999


Q ss_pred             EEEEEeCCeEEEEEeccCCCCHHHHHhcCCCC--------CcCCHH----------------HHHhhhhcccccCC
Q 007129          566 IGCCTQRDERMLIYEYLPNKSLNDFIFGFLYT--------EHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       566 ~g~~~~~~~~~lv~E~~~~GsL~~~L~~~~~~--------~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++++......++|+||+++|+|.+++......        ..++|.                +...|+|+||||+|
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~N  160 (296)
T cd05095          85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRN  160 (296)
T ss_pred             EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChhe
Confidence            99999999999999999999999999764311        123333                44578999999988

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.15  E-value=1.5e-10  Score=116.58  Aligned_cols=114  Identities=21%  Similarity=0.328  Sum_probs=93.4

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|+..++||+|+||.||++... .++.+|+|.++..   .....+.+.+|++++.+++|+|++++++++...+..++|+
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            46777889999999999999987 5889999988532   2334578999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCC-CCcCCHH----------------HHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLY-TEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~-~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.+++..... ...+++.                +...|+|+||+|+|
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~n  136 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPAN  136 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhh
Confidence            99999999999865321 2234443                44578899999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.15  E-value=8.4e-11  Score=122.60  Aligned_cols=113  Identities=22%  Similarity=0.169  Sum_probs=90.0

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCC-CcccceEEEEEeCCeEEEEE
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQH-RNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H-~nlv~l~g~~~~~~~~~lv~  579 (617)
                      +|...+.||+|+||.||++.... ++.||+|.+...   .....+.+..|+.++..++| ++|+++.+++...+..++||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            35667899999999999999865 778999998643   22345678899999999866 56888999998899999999


Q ss_pred             eccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.+++..... .            ..|.+-+...|+|+||||+|
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~N  131 (324)
T cd05587          81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDN  131 (324)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHH
Confidence            99999999999875431 0            11344566789999999987

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.15  E-value=1.7e-10  Score=117.42  Aligned_cols=112  Identities=26%  Similarity=0.365  Sum_probs=91.2

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch-hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG-QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~-~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      +|...++||+|++|.||++.... +..||+|.++.... ...+.+.+|+.++++++|+|++++++++...+..++|+||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            36667899999999999999864 88999999875432 23467889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      + |+|.+++........+++....                .|+|+||+|+|
T Consensus        81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~n  130 (284)
T cd07836          81 D-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQN  130 (284)
T ss_pred             C-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHH
Confidence            8 5899998765433446666443                47899999876

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.15  E-value=1.3e-10  Score=119.63  Aligned_cols=110  Identities=23%  Similarity=0.343  Sum_probs=92.0

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      ..|...++||+|+||.||++... .++.+|+|.+........+.+.+|+.++..+.|+|++++++.+..+...++|+||+
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~   99 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence            45666789999999999999865 48899999987654455678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++++|.+++....    +++.                +...|+|+||+|+|
T Consensus       100 ~~~~L~~~~~~~~----~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~N  146 (296)
T cd06654         100 AGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN  146 (296)
T ss_pred             CCCCHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH
Confidence            9999999986532    3333                34478899999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.15  E-value=6.2e-11  Score=124.89  Aligned_cols=114  Identities=27%  Similarity=0.360  Sum_probs=95.9

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch---hhHHHHHHHHHHHHccC-CCcccceEEEEEeCCeEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG---QGMEEFENEVLLIAKLQ-HRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~---~~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~~~~~~lv  578 (617)
                      ..|...++||+|.||.||++..+. |+.+|+|.+.+...   ...+.+.+|+.+|.++. |||+|.+.+.+......++|
T Consensus        35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lv  114 (382)
T KOG0032|consen   35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLV  114 (382)
T ss_pred             ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEE
Confidence            456666899999999999999987 89999999975433   24468999999999998 99999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||++.+|.|.+.|......            ..+...+...|+|+||||.|
T Consensus       115 mEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN  165 (382)
T KOG0032|consen  115 MELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPEN  165 (382)
T ss_pred             EEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHH
Confidence            9999999999999875111            12344577899999999987

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.15  E-value=2.7e-10  Score=115.83  Aligned_cols=108  Identities=20%  Similarity=0.278  Sum_probs=88.9

Q ss_pred             CCCcceecccCceeEEEEEEc-CCcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          506 FSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      |...++||+|+||.||++... ++..+|+|.+.... ....+.|.+|+.++.+++|||++++++++..+...++|+||++
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG   85 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence            555678999999999999875 47899999876432 3345679999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      +++|.+++...    .+++..                ...|+|+||+|+|
T Consensus        86 ~~~l~~~i~~~----~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~N  131 (277)
T cd06641          86 GGSALDLLEPG----PLDETQIATILREILKGLDYLHSEKKIHRDIKAAN  131 (277)
T ss_pred             CCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHh
Confidence            99999998643    244543                3357889999887

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.15  E-value=1.1e-10  Score=121.36  Aligned_cols=108  Identities=22%  Similarity=0.192  Sum_probs=85.0

Q ss_pred             ceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHc-cCCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          510 NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAK-LQHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~-l~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      +.||+|+||.||++.... ++.||||.++...   ....+.+..|..++.. ++||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            379999999999999865 7899999986431   2334566778877776 4899999999999999999999999999


Q ss_pred             CCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+|.+++.....-             ..|..-+...|+|+||||+|
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~N  126 (316)
T cd05619          81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDN  126 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHH
Confidence            9999999754210             01233355588999999987

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.14  E-value=2.3e-10  Score=117.38  Aligned_cols=114  Identities=30%  Similarity=0.437  Sum_probs=92.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-----------------CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccce
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-----------------GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKL  565 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-----------------g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l  565 (617)
                      .+|...++||+|+||.||++....                 +..||+|.+... .....++|.+|+.++.+++|||++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~   84 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL   84 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence            456777899999999999987643                 245899998743 33456789999999999999999999


Q ss_pred             EEEEEeCCeEEEEEeccCCCCHHHHHhcCCC--------CCcCCHH----------------HHHhhhhcccccCC
Q 007129          566 IGCCTQRDERMLIYEYLPNKSLNDFIFGFLY--------TEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       566 ~g~~~~~~~~~lv~E~~~~GsL~~~L~~~~~--------~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++++......++++||+++++|.++|.....        ...+++.                +...|+|+||||+|
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~N  160 (296)
T cd05051          85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRN  160 (296)
T ss_pred             EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhc
Confidence            9999999999999999999999999976431        1134444                44477899999998

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.14  E-value=2e-10  Score=115.08  Aligned_cols=106  Identities=32%  Similarity=0.455  Sum_probs=88.7

Q ss_pred             ceecccCceeEEEEEEcC--C--cEEEEeecccCch-hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          510 NKLGEGGFGPVYKGVLIE--G--QEIAAKRLSKSSG-QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~--g--~~vAvK~l~~~~~-~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      ++||+|++|.||++....  +  ..||+|.+..... ...+.|.+|+.++.+++|+||+++++.+.. ...++|+||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            368999999999998754  2  3699999976544 556789999999999999999999999988 888999999999


Q ss_pred             CCHHHHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          585 KSLNDFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      |+|.+++.+... ..++|....                .|+|+||+|+|
T Consensus        80 ~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~n  127 (257)
T cd05040          80 GSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARN  127 (257)
T ss_pred             CcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhCCccccccCccc
Confidence            999999987542 346666444                68999999988

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.14  E-value=2.4e-10  Score=117.06  Aligned_cols=88  Identities=30%  Similarity=0.495  Sum_probs=74.9

Q ss_pred             CCCcceecccCceeEEEEEEcC------CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE------GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~------g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      |...+.||+|+||.||+|....      ...+|+|.+.... ....+++.+|+.++..++||||+++++.+...+..+++
T Consensus         2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (290)
T cd05045           2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI   81 (290)
T ss_pred             ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence            5566799999999999998632      3578999886433 33457899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhc
Q 007129          579 YEYLPNKSLNDFIFG  593 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~  593 (617)
                      +||+++|+|.++|..
T Consensus        82 ~e~~~~~~L~~~l~~   96 (290)
T cd05045          82 VEYAKYGSLRSFLRE   96 (290)
T ss_pred             EEecCCCCHHHHHHh
Confidence            999999999999865

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.14  E-value=9.5e-11  Score=121.25  Aligned_cols=113  Identities=23%  Similarity=0.295  Sum_probs=89.6

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      +.|...++||+|+||.||++.... ++.||+|.++... ......+.+|+.++.+++||||+++++++...+..++||||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            456777899999999999998764 7889999986432 22335688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +++ +|.+++......              ..|..-+...|+|+||+|+|
T Consensus        86 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~N  134 (309)
T cd07872          86 LDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQN  134 (309)
T ss_pred             CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH
Confidence            974 899888654311              01223345578999999987

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.14  E-value=1.9e-11  Score=122.44  Aligned_cols=107  Identities=24%  Similarity=0.413  Sum_probs=81.5

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCe-----EEEEE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDE-----RMLIY  579 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~-----~~lv~  579 (617)
                      +...+++|.|+||.||+|.+.. ++.||||+.-...+    .--+|+.+|+++.|||||+|+-++....+     ..||+
T Consensus        26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl  101 (364)
T KOG0658|consen   26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL  101 (364)
T ss_pred             EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence            4456799999999999999976 78999998853322    22468889999999999999988876322     35899


Q ss_pred             eccCCCCHHHHHhcC---CCC------CcCCH--------HHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGF---LYT------EHFFW--------SFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~---~~~------~~l~w--------~~r~~i~~~~~~~~n  617 (617)
                      ||||. +|.++++.-   +++      ++..|        -+...|.||||||.|
T Consensus       102 eymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqN  155 (364)
T KOG0658|consen  102 EYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQN  155 (364)
T ss_pred             HhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChhe
Confidence            99986 899999842   111      12233        366899999999998

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.14  E-value=7.8e-11  Score=122.64  Aligned_cols=108  Identities=23%  Similarity=0.234  Sum_probs=87.0

Q ss_pred             ceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          510 NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      +.||+|+||.||++.... ++.||+|.++..   .....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            379999999999999865 789999998642   223446778888888876 699999999999999999999999999


Q ss_pred             CCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+|.+++.....-             ..|..-+...|+|+||||+|
T Consensus        81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~N  126 (320)
T cd05590          81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDN  126 (320)
T ss_pred             chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHH
Confidence            9999998764320             11344466689999999987

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.14  E-value=2.3e-10  Score=115.06  Aligned_cols=104  Identities=30%  Similarity=0.438  Sum_probs=83.2

Q ss_pred             eecccCceeEEEEEEc--C-CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCC
Q 007129          511 KLGEGGFGPVYKGVLI--E-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKS  586 (617)
Q Consensus       511 ~lG~G~fG~Vykg~l~--~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~Gs  586 (617)
                      +||+|+||.||+|.+.  + +..||+|.+.... ....++|.+|+.++++++|+||+++++++. ....++|+||+++|+
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence            5899999999999874  2 4579999987543 334567999999999999999999999885 457889999999999


Q ss_pred             HHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          587 LNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       587 L~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |.+++....  ..+++.                +...|+|+||+|+|
T Consensus        81 L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~n  125 (257)
T cd05115          81 LNKFLSGKK--DEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARN  125 (257)
T ss_pred             HHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchhe
Confidence            999997532  234444                44467999999987

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.14  E-value=1e-10  Score=118.42  Aligned_cols=107  Identities=21%  Similarity=0.342  Sum_probs=84.7

Q ss_pred             eecccCceeEEEEEEcCC---cEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCC
Q 007129          511 KLGEGGFGPVYKGVLIEG---QEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKS  586 (617)
Q Consensus       511 ~lG~G~fG~Vykg~l~~g---~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~Gs  586 (617)
                      +||+|+||.||++...++   ..+++|.+.... ....+.|.+|+.+++.++||||+++++.+......++|+||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            699999999999976543   346677665432 3445789999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCC-CCc----------------CCHHHHHhhhhcccccCC
Q 007129          587 LNDFIFGFLY-TEH----------------FFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       587 L~~~L~~~~~-~~~----------------l~w~~r~~i~~~~~~~~n  617 (617)
                      |.++|..... ...                |..-+...|+|+||+|+|
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~n  129 (268)
T cd05086          82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRN  129 (268)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccce
Confidence            9999975421 111                233355688999999998

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.14  E-value=1.9e-10  Score=118.90  Aligned_cols=114  Identities=24%  Similarity=0.389  Sum_probs=91.5

Q ss_pred             cCCCCcceecccCceeEEEEEEcC--------CcEEEEeecccC-chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCC
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE--------GQEIAAKRLSKS-SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRD  573 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~--------g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~  573 (617)
                      ++|...++||+|+||.||++....        ...+|+|.++.. ......++..|+.++.++ +|+||+++++++....
T Consensus        18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   97 (307)
T cd05098          18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   97 (307)
T ss_pred             HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence            457778899999999999987532        346999998753 234456789999999999 7999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCC-------------CCcCCHHH----------------HHhhhhcccccCC
Q 007129          574 ERMLIYEYLPNKSLNDFIFGFLY-------------TEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       574 ~~~lv~E~~~~GsL~~~L~~~~~-------------~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      ..++|+||+++|+|.++|.....             ...++|.+                ...|+|+||+|+|
T Consensus        98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N  170 (307)
T cd05098          98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARN  170 (307)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHh
Confidence            99999999999999999976421             12356643                3468899999987

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.14  E-value=1.4e-10  Score=118.07  Aligned_cols=114  Identities=32%  Similarity=0.519  Sum_probs=91.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-C-----cEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-G-----QEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERM  576 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g-----~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~  576 (617)
                      ++|...+.||+|+||.||+|.... +     ..||+|.+.... ....++|.+|+.++.+++|||++++++++......+
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            356677899999999999998743 2     579999986432 334567999999999999999999999999989999


Q ss_pred             EEEeccCCCCHHHHHhcCCCC-------------CcCCHH----------------HHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYT-------------EHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~-------------~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +++||+++|+|.++|......             ..+++.                +...|+|+||+|+|
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~N  154 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARN  154 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccce
Confidence            999999999999999754210             234443                44467889999988

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.14  E-value=1.7e-10  Score=117.30  Aligned_cols=115  Identities=20%  Similarity=0.372  Sum_probs=92.5

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-----CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEe-CCeE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-----GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ-RDER  575 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-----g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~-~~~~  575 (617)
                      .++|...+.||+|+||.||+|....     +..|++|.+... .....+.+.+|+.++.+++|+|++++++++.. +...
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   84 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP   84 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence            4567777899999999999999865     678999988743 33445779999999999999999999999877 4678


Q ss_pred             EEEEeccCCCCHHHHHhcCCCC-----CcCCHHHHH----------------hhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYT-----EHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~-----~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      ++++||+++|+|.++|......     ..+++.++.                .|+|+||+|+|
T Consensus        85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~n  147 (280)
T cd05043          85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARN  147 (280)
T ss_pred             EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhh
Confidence            8999999999999999764322     346666544                45689999887

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.14  E-value=1.4e-10  Score=117.00  Aligned_cols=114  Identities=21%  Similarity=0.363  Sum_probs=92.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      ++|...++||+|+||.||++.... ++.+|+|.++.........+.+|+.++..++|||++++++.+...+..++|+||+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            345566789999999999998754 8899999987554455567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++++|.+++..... .            ..+...+...|+|+||+|+|
T Consensus        89 ~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~n  136 (267)
T cd06645          89 GGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGAN  136 (267)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH
Confidence            99999999865431 0            01233345578999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.14  E-value=1.4e-10  Score=116.20  Aligned_cols=112  Identities=26%  Similarity=0.452  Sum_probs=91.1

Q ss_pred             CCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      +|...+.||+|+||.||++....+..+|+|.+... .....+|.+|+.++.+++|||++++++++......++|+||+++
T Consensus         5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   83 (256)
T cd05112           5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG-AMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH   83 (256)
T ss_pred             HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCC-CCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence            45666899999999999998877889999988643 23346799999999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCC----C----------cCCHHHHHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLYT----E----------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~----~----------~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++|.+++......    .          .+.+.++..|+|+||+|+|
T Consensus        84 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~n  130 (256)
T cd05112          84 GCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARN  130 (256)
T ss_pred             CcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccce
Confidence            9999999754311    0          1222345578899999988

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.13  E-value=1e-10  Score=121.71  Aligned_cols=108  Identities=19%  Similarity=0.180  Sum_probs=84.1

Q ss_pred             ceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHH-HHHccCCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          510 NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVL-LIAKLQHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~-~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      ++||+|+||.||++.... ++.+|+|.+....   .....++..|.. ++..++||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            379999999999999865 7899999986432   122345566654 57889999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+|..++.....-             ..|...+...|+|+||||+|
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~N  126 (321)
T cd05603          81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPEN  126 (321)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHH
Confidence            9999988654210             11334456689999999987

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.13  E-value=2.3e-10  Score=118.12  Aligned_cols=110  Identities=15%  Similarity=0.215  Sum_probs=91.3

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      +|...+.||+|+||.||++.... ++.|++|.+....   ....+.+.+|+.++..++||||+++++.+..+.+.++|+|
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME   81 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence            56777899999999999998865 7899999986542   2334678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |+++++|.++|....   .+.+.                +...|+|+||+|+|
T Consensus        82 ~~~g~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~N  131 (305)
T cd05609          82 YVEGGDCATLLKNIG---ALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDN  131 (305)
T ss_pred             cCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHH
Confidence            999999999996543   23333                34478899999987

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.13  E-value=2.6e-10  Score=115.99  Aligned_cols=111  Identities=31%  Similarity=0.500  Sum_probs=89.8

Q ss_pred             CCCCcceecccCceeEEEEEEc-----CCcEEEEeecccCchh-hHHHHHHHHHHHHccCCCcccceEEEEEe--CCeEE
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLI-----EGQEIAAKRLSKSSGQ-GMEEFENEVLLIAKLQHRNLVKLIGCCTQ--RDERM  576 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~-----~g~~vAvK~l~~~~~~-~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~--~~~~~  576 (617)
                      .|...+.||+|+||.||++.+.     .+..+|||.+...... ..++|.+|+.++..++|+|++++.+++..  +...+
T Consensus         5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05038           5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR   84 (284)
T ss_pred             hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence            3555679999999999999874     2578999999754332 46789999999999999999999999877  55789


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      +++||+++++|.+++....  ..++|..++                .|+|+||+|+|
T Consensus        85 lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~n  139 (284)
T cd05038          85 LIMEYLPSGSLRDYLQRHR--DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARN  139 (284)
T ss_pred             EEEecCCCCCHHHHHHhCc--cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHh
Confidence            9999999999999997643  235555443                57889999987

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.13  E-value=3.4e-10  Score=113.31  Aligned_cols=109  Identities=27%  Similarity=0.458  Sum_probs=89.8

Q ss_pred             CCCcceecccCceeEEEEEEc-CCcEEEEeecccCc-----hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS-----GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~-----~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      |...+.||+|+||.||+|... ++..|++|.+....     .+..+++.+|+.++++++|+|++++.+++......++++
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL   81 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence            445678999999999999987 58899999886432     234578999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      ||+++++|.+++....   .+++..                ...|+|+||+|+|
T Consensus        82 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~n  132 (258)
T cd06632          82 ELVPGGSLAKLLKKYG---SFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGAN  132 (258)
T ss_pred             EecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH
Confidence            9999999999997543   244443                3456789999887

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.13  E-value=1.9e-10  Score=119.66  Aligned_cols=105  Identities=25%  Similarity=0.227  Sum_probs=86.2

Q ss_pred             ceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          510 NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      +.||+|+||.||++.... ++.+|+|.++..   .....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            379999999999999865 789999998743   223446678888888887 799999999999999999999999999


Q ss_pred             CCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |+|..++....   .+++.                +...|+|+||+|+|
T Consensus        81 ~~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~N  126 (318)
T cd05570          81 GDLMFHIQRSG---RFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDN  126 (318)
T ss_pred             CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHH
Confidence            99999987643   23443                45578999999987

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.13  E-value=4.3e-11  Score=123.71  Aligned_cols=112  Identities=21%  Similarity=0.272  Sum_probs=94.7

Q ss_pred             CCCcceecccCceeEEEEEEc-CCcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          506 FSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      |...+.||+|.|..|-.+..- .|..||||.+.+..  ......+.+|++.|+-+||||||+|+.+...+..+|||+|.-
T Consensus        20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELG   99 (864)
T KOG4717|consen   20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELG   99 (864)
T ss_pred             ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEec
Confidence            455678999999998777653 48999999997642  333457889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      .+|+|++||..+...              ..+++.+.+++.|+||||.|
T Consensus       100 D~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPEN  148 (864)
T KOG4717|consen  100 DGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPEN  148 (864)
T ss_pred             CCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcce
Confidence            999999999976431              24788899999999999988

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.13  E-value=3.9e-10  Score=112.94  Aligned_cols=111  Identities=19%  Similarity=0.202  Sum_probs=91.4

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      |+..+.||+|+||.||.+.... ++.+++|.+...  .....+++.+|+.++++++|+|++++++++.+....++++||+
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~   81 (256)
T cd08221           2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYA   81 (256)
T ss_pred             ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEec
Confidence            5667899999999999888654 888999987643  3455678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++|+|.+++.... ...+++.                ++.+|+|+||+|+|
T Consensus        82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~n  131 (256)
T cd08221          82 NGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLN  131 (256)
T ss_pred             CCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHh
Confidence            9999999997642 2234443                45567899999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.13  E-value=2.1e-10  Score=118.31  Aligned_cols=114  Identities=24%  Similarity=0.423  Sum_probs=91.1

Q ss_pred             cCCCCcceecccCceeEEEEEEc--------CCcEEEEeecccC-chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCC
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI--------EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRD  573 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~--------~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~  573 (617)
                      ++|...+.||+|+||.||++...        ++..||+|.+... .....+++.+|+.++..+ +||||+++++++....
T Consensus        15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~   94 (304)
T cd05101          15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG   94 (304)
T ss_pred             HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCC
Confidence            45666789999999999999752        2357999988643 234457899999999999 8999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCC-------------CCcCCHH----------------HHHhhhhcccccCC
Q 007129          574 ERMLIYEYLPNKSLNDFIFGFLY-------------TEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       574 ~~~lv~E~~~~GsL~~~L~~~~~-------------~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ..++||||+++|+|.++|.....             ...++|.                +...|+|+||+|+|
T Consensus        95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~N  167 (304)
T cd05101          95 PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARN  167 (304)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccce
Confidence            99999999999999999986421             1235554                33468899999988

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.13  E-value=2.9e-10  Score=114.98  Aligned_cols=111  Identities=27%  Similarity=0.461  Sum_probs=86.0

Q ss_pred             CCcceecccCceeEEEEEEcC-Cc--EEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeC------CeE
Q 007129          507 SDKNKLGEGGFGPVYKGVLIE-GQ--EIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR------DER  575 (617)
Q Consensus       507 ~~~~~lG~G~fG~Vykg~l~~-g~--~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~------~~~  575 (617)
                      ...++||+|+||.||+|.... +.  .+|+|.++..  .....+.|.+|+.++..++|+||+++++++...      ...
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            345789999999999999865 33  5899988643  344567899999999999999999999988542      246


Q ss_pred             EEEEeccCCCCHHHHHhcCC---CCCcCCHHH----------------HHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFL---YTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~---~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      ++++||+++|+|.+++...+   ....++|..                ...|+|+||||.|
T Consensus        82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~N  142 (272)
T cd05075          82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARN  142 (272)
T ss_pred             EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhh
Confidence            89999999999999885322   123355653                3468899999988

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.13  E-value=1.9e-10  Score=116.84  Aligned_cols=112  Identities=20%  Similarity=0.314  Sum_probs=91.2

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      |+..++||.|+||.||++.... +..||+|.+... .....+.+.+|+.++.+++|+|++++++++......++|+||++
T Consensus         6 y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06640           6 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLG   85 (277)
T ss_pred             hhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCC
Confidence            4556789999999999998764 789999988643 23445789999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|+|.+++......            ..+.+-+...|+|+||+|+|
T Consensus        86 ~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~N  131 (277)
T cd06640          86 GGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAAN  131 (277)
T ss_pred             CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhh
Confidence            99999998753211            01233355578999999987

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.13  E-value=1.3e-10  Score=121.24  Aligned_cols=108  Identities=18%  Similarity=0.161  Sum_probs=84.6

Q ss_pred             ceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHH-HHHccCCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          510 NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVL-LIAKLQHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~-~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      +.||+|+||.||++.... ++.+|+|.+...   ......++..|.. ++..++||||+++++.+...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            369999999999998754 889999998643   2233455666665 46778999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+|..++.....-             ..|..-+...|+|+||||+|
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~N  126 (325)
T cd05604          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPEN  126 (325)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHH
Confidence            9999988754310             11334466789999999987

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.12  E-value=3.4e-10  Score=114.60  Aligned_cols=108  Identities=31%  Similarity=0.507  Sum_probs=86.9

Q ss_pred             ceecccCceeEEEEEEcC-Cc--EEEEeecccC-chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          510 NKLGEGGFGPVYKGVLIE-GQ--EIAAKRLSKS-SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-g~--~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      +.||+|+||.||++...+ +.  .+|+|.+... .....+.|.+|+.++.++ +|||++++++++...+..+++|||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            368999999999999865 43  4788888643 344557899999999999 899999999999999999999999999


Q ss_pred             CCHHHHHhcCCC-------------CCcCCHHHH----------------HhhhhcccccCC
Q 007129          585 KSLNDFIFGFLY-------------TEHFFWSFF----------------FSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~-------------~~~l~w~~r----------------~~i~~~~~~~~n  617 (617)
                      |+|.++|.....             ...+.+.++                ..|+|+||+|+|
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~n  142 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARN  142 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccce
Confidence            999999975421             123455543                368899999998

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.12  E-value=1.6e-10  Score=116.52  Aligned_cols=114  Identities=20%  Similarity=0.298  Sum_probs=91.7

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...+.||+|+||.||++... ++..+|||.+...   .....++|.+|+.++..++|+|++++++++.+.+..++++
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            34666789999999999999975 5889999987642   2234468999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCC-CCCcCCHH----------------HHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFL-YTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~-~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ||+++++|.+++.... ....++|.                +...|+|+||+|+|
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~n  136 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPAN  136 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH
Confidence            9999999999986421 12345555                33467889999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.12  E-value=2.4e-10  Score=115.25  Aligned_cols=114  Identities=19%  Similarity=0.303  Sum_probs=91.4

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...++||+|+||.||++... .++.||||.+...   .......|.+|+.+++.++|||++++++++...+..++++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            46777889999999999999876 4889999987532   2334467899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCC-CCcCC----------------HHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLY-TEHFF----------------WSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~-~~~l~----------------w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.+++..... ...++                .-+...|+|+||+|+|
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~n  136 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPAN  136 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHH
Confidence            99999999998853211 12222                2255578899999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.12  E-value=2.5e-10  Score=115.85  Aligned_cols=114  Identities=21%  Similarity=0.337  Sum_probs=91.8

Q ss_pred             cCCCCcceecccCceeEEEEEEcC------CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE------GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERM  576 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~------g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~  576 (617)
                      ++|...++||+|+||.||++....      +..||+|.+.... .....+|.+|+.++..++|+|++++++++......+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   85 (277)
T cd05032           6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL   85 (277)
T ss_pred             HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence            456777899999999999998753      3679999986442 344568999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCCC-------CCcCCHH----------------HHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLY-------TEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~-------~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +|+||+++|+|.++|.....       ...++|.                +...|+|+||+|+|
T Consensus        86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~n  149 (277)
T cd05032          86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARN  149 (277)
T ss_pred             EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChhe
Confidence            99999999999999975421       1124444                34468899999987

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.12  E-value=1.4e-10  Score=117.99  Aligned_cols=113  Identities=14%  Similarity=0.176  Sum_probs=89.9

Q ss_pred             CCCCcceecccCceeEEEEEEc-CCcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      +|...++||+|+||.||++... .++.+|+|.+... .....++|.+|+.++.+++|||++++++++...+..++|+||+
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   81 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM   81 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence            4566679999999999999875 4789999998643 3344568999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCC---------CCcCCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLY---------TEHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~---------~~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++++|..+..-+..         -..|..-+...|+|+||+|+|
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N  125 (279)
T cd06619          82 DGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSN  125 (279)
T ss_pred             CCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHH
Confidence            99999766432110         012344456689999999987

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.12  E-value=9.7e-11  Score=127.69  Aligned_cols=92  Identities=22%  Similarity=0.489  Sum_probs=69.4

Q ss_pred             hccCCCCcceecccCceeEEEEEE-----------------cCCcEEEEeecccCchhhHHHH--------------HHH
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVL-----------------IEGQEIAAKRLSKSSGQGMEEF--------------ENE  550 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l-----------------~~g~~vAvK~l~~~~~~~~~~f--------------~~E  550 (617)
                      ..++|...++||+|+||.||+|.+                 ..++.||||++........++|              ..|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            467899999999999999999974                 1256799999864333223334              446


Q ss_pred             HHHHHccCCCcc-----cceEEEEEe--------CCeEEEEEeccCCCCHHHHHhc
Q 007129          551 VLLIAKLQHRNL-----VKLIGCCTQ--------RDERMLIYEYLPNKSLNDFIFG  593 (617)
Q Consensus       551 v~~l~~l~H~nl-----v~l~g~~~~--------~~~~~lv~E~~~~GsL~~~L~~  593 (617)
                      +.++.+++|.++     ++++++|..        .+..+|||||+++|+|.++|+.
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~  278 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDG  278 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhh
Confidence            677777766654     678888754        3568999999999999999975

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.12  E-value=3.5e-11  Score=125.78  Aligned_cols=103  Identities=25%  Similarity=0.390  Sum_probs=86.2

Q ss_pred             CCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCC
Q 007129          507 SDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKS  586 (617)
Q Consensus       507 ~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~Gs  586 (617)
                      +..+-||.|+-|.||.|++ .++.||||+++...       ..+|+.|++|+|+||+.+.|+|....-.+||||||+.|-
T Consensus       127 sELeWlGSGaQGAVF~Grl-~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~Gq  198 (904)
T KOG4721|consen  127 SELEWLGSGAQGAVFLGRL-HNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQ  198 (904)
T ss_pred             hhhhhhccCcccceeeeec-cCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeecccccc
Confidence            3456899999999999999 56889999886432       256788999999999999999999999999999999999


Q ss_pred             HHHHHhcCCC---CCcCCHHH----------HHhhhhcccccCC
Q 007129          587 LNDFIFGFLY---TEHFFWSF----------FFSFENLSLVDRN  617 (617)
Q Consensus       587 L~~~L~~~~~---~~~l~w~~----------r~~i~~~~~~~~n  617 (617)
                      |.+.|...+.   ..+.+|.+          --+|||+|||-=|
T Consensus       199 L~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPN  242 (904)
T KOG4721|consen  199 LYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPN  242 (904)
T ss_pred             HHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCc
Confidence            9999987642   33567874          4489999999755

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.12  E-value=3.1e-10  Score=114.39  Aligned_cols=114  Identities=24%  Similarity=0.375  Sum_probs=88.0

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC-----chhhHHHHHHHHHHHHccCCCcccceEEEEEeC--CeE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS-----SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR--DER  575 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~-----~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~--~~~  575 (617)
                      ++|...+.||+|+||.||++...+ +..||+|.+...     .....+.+.+|+.++.+++||||+++++++.+.  ...
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            467778899999999999998865 889999987522     123356789999999999999999999988763  457


Q ss_pred             EEEEeccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++++||+++++|.+++..... .            ..|...+...|+|+||+|+|
T Consensus        82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~n  136 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGAN  136 (265)
T ss_pred             EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHH
Confidence            899999999999999865421 0            01122234468899999987

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.11  E-value=1.8e-10  Score=117.56  Aligned_cols=111  Identities=29%  Similarity=0.441  Sum_probs=89.2

Q ss_pred             CCCCcceecccCceeEEEEEEc-----CCcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeC--CeEE
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLI-----EGQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR--DERM  576 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~-----~g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~--~~~~  576 (617)
                      .|...++||+|+||.||++.+.     .+..||+|.++... ....+.|.+|+.++++++|||++++.+++...  ...+
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK   84 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence            3566789999999999999853     36789999987443 34457899999999999999999999998775  5678


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +|+||+++++|.+++....  ..++|.                +...|+|+||+|+|
T Consensus        85 lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~N  139 (284)
T cd05079          85 LIMEFLPSGSLKEYLPRNK--NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARN  139 (284)
T ss_pred             EEEEccCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchhe
Confidence            9999999999999996542  234555                34467889999988

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.11  E-value=5.9e-10  Score=111.63  Aligned_cols=111  Identities=21%  Similarity=0.234  Sum_probs=90.1

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      |...++||+|+||.||++.... ++.+|+|.++.. .....+.+.+|+.++.+++|+|++++.+.+......++++||++
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   81 (255)
T cd08219           2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD   81 (255)
T ss_pred             ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCC
Confidence            5556899999999999998764 889999988632 23445788999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCcCC----------------HHHHHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFF----------------WSFFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~----------------w~~r~~i~~~~~~~~n  617 (617)
                      +|+|.+++..... ..++                .-+...|+|+||+|+|
T Consensus        82 ~~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~n  130 (255)
T cd08219          82 GGDLMQKIKLQRG-KLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKN  130 (255)
T ss_pred             CCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcce
Confidence            9999999865321 1222                2234478999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.11  E-value=2.5e-10  Score=114.67  Aligned_cols=114  Identities=23%  Similarity=0.349  Sum_probs=94.9

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      ++|...+.||+|+||.||++.... ++.+++|.+........+.+.+|+.++.+++|||+++++++.......++++||+
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~   82 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC   82 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence            467777899999999999998865 7789999987655556788999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++++|.+++......              ..|...+..+|+|+||+|+|
T Consensus        83 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~n  131 (262)
T cd06613          83 GGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGAN  131 (262)
T ss_pred             CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhh
Confidence            999999998764211              11233355678999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.11  E-value=1.5e-10  Score=120.36  Aligned_cols=108  Identities=22%  Similarity=0.166  Sum_probs=83.8

Q ss_pred             ceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHc-cCCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          510 NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAK-LQHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~-l~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      ++||+|+||.||++.... ++.||+|.++..   .....+.+..|..++.. .+||||+++++++......++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            379999999999999865 788999998643   12334556667776665 4899999999999999999999999999


Q ss_pred             CCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+|..++.....-             ..|...+...|+|+||||+|
T Consensus        81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~N  126 (316)
T cd05592          81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDN  126 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHH
Confidence            9999998754310             01233355679999999987

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.11  E-value=2.6e-10  Score=114.95  Aligned_cols=110  Identities=18%  Similarity=0.350  Sum_probs=89.4

Q ss_pred             CCCCcceecccCceeEEEEEEc-CCcEEEEeecccCc------hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS------GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~------~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      +|+..+.||+|++|.||++... .++.+|+|.+....      ....+.+.+|+.++++++|+||+++++++.+.+..++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            3566789999999999999874 48899999986422      1234689999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |+||+++++|.++|....   .+++.                +...++|+||+|+|
T Consensus        81 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~n  133 (268)
T cd06630          81 FVEWMAGGSVSHLLSKYG---AFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGAN  133 (268)
T ss_pred             EEeccCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence            999999999999997543   23333                33467888998876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.11  E-value=8.7e-11  Score=129.72  Aligned_cols=115  Identities=25%  Similarity=0.362  Sum_probs=92.3

Q ss_pred             ccCCCCcceecccCceeEEEEEEcCC-cEEEEeecccCchhhHHHHHHHHHHHHccC-CCcccceEEE-EEe------CC
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIEG-QEIAAKRLSKSSGQGMEEFENEVLLIAKLQ-HRNLVKLIGC-CTQ------RD  573 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~g-~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~-H~nlv~l~g~-~~~------~~  573 (617)
                      ...+...+.|.+|||+.||.+....+ ..+|+|++-.......+..++||++|++|. |+|||.+++. ...      .-
T Consensus        36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~  115 (738)
T KOG1989|consen   36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW  115 (738)
T ss_pred             CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence            34456678999999999999999775 999999998777888899999999999996 9999999993 222      13


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCCCC---------------cCCHHHHHh--hhhcccccCC
Q 007129          574 ERMLIYEYLPNKSLNDFIFGFLYTE---------------HFFWSFFFS--FENLSLVDRN  617 (617)
Q Consensus       574 ~~~lv~E~~~~GsL~~~L~~~~~~~---------------~l~w~~r~~--i~~~~~~~~n  617 (617)
                      +.+|+||||++|+|-+||.......               .+.-.+.++  |||||||..|
T Consensus       116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiEN  176 (738)
T KOG1989|consen  116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIEN  176 (738)
T ss_pred             EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhh
Confidence            6789999999999999998543222               122335556  9999999887

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.11  E-value=2.8e-10  Score=118.87  Aligned_cols=108  Identities=18%  Similarity=0.140  Sum_probs=86.3

Q ss_pred             ceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          510 NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      +.||+|+||.||++.... ++.+|+|.++...   ....+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            379999999999999865 7899999997432   23446688999999888 699999999999999999999999999


Q ss_pred             CCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+|..++..... .            ..|..-+...|+|+||||+|
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~N  126 (327)
T cd05617          81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDN  126 (327)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH
Confidence            999998865421 0            01233345578999999987

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.11  E-value=2.5e-10  Score=116.91  Aligned_cols=116  Identities=24%  Similarity=0.410  Sum_probs=92.2

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC------CcEEEEeecccC-chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCC
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE------GQEIAAKRLSKS-SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRD  573 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~------g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~  573 (617)
                      ..++|...+.||+|+||.||++....      ...+|+|.+... ......++.+|+.++.++ +|+|++++++++...+
T Consensus        10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~   89 (293)
T cd05053          10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG   89 (293)
T ss_pred             CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence            34567777899999999999998743      357999998743 334456799999999999 7999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHhcCC-------------CCCcCCHH----------------HHHhhhhcccccCC
Q 007129          574 ERMLIYEYLPNKSLNDFIFGFL-------------YTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       574 ~~~lv~E~~~~GsL~~~L~~~~-------------~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ..++++||+++|+|.+++....             ....++|.                +...|+|+||+|+|
T Consensus        90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~N  162 (293)
T cd05053          90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARN  162 (293)
T ss_pred             CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceee
Confidence            9999999999999999996431             12234444                44578899999988

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.11  E-value=2.3e-10  Score=114.49  Aligned_cols=111  Identities=21%  Similarity=0.295  Sum_probs=91.3

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      |+..+.||+|+||.||++.... +..+|+|.+...  .....+.+.+|+.+++.++|+|++++++.+......++|+||+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   81 (257)
T cd08225           2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYC   81 (257)
T ss_pred             ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecC
Confidence            5667899999999999999875 788999998642  2234567899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHHHH----------------HhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWSFF----------------FSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~~r----------------~~i~~~~~~~~n  617 (617)
                      ++++|.+++.... ...++|..+                ..|+|+||+|+|
T Consensus        82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~n  131 (257)
T cd08225          82 DGGDLMKRINRQR-GVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQN  131 (257)
T ss_pred             CCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHH
Confidence            9999999997643 224566544                467888998876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.11  E-value=1.7e-10  Score=119.79  Aligned_cols=108  Identities=21%  Similarity=0.158  Sum_probs=85.6

Q ss_pred             ceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          510 NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      ++||+|+||.||++.... +..||+|.++...   ....+.+..|..++..+ +|||++++++++...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            479999999999999865 7899999986431   23345677788777754 899999999999999999999999999


Q ss_pred             CCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+|..++.....-             ..|...+...|+|+||||+|
T Consensus        81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~N  126 (316)
T cd05620          81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDN  126 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHH
Confidence            9999998764310             01233455689999999987

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.11  E-value=2.4e-10  Score=121.58  Aligned_cols=112  Identities=14%  Similarity=0.215  Sum_probs=88.4

Q ss_pred             CCCCcceecccCceeEEEEEEc-CCcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCC-----eEE
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD-----ERM  576 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~-----~~~  576 (617)
                      +|+..++||+|+||.||++... +++.||+|++...  .....+++.+|+.++..++|+||+++++++....     +.+
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            3677789999999999999875 4889999998643  2234567899999999999999999999998766     789


Q ss_pred             EEEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|+||+. ++|.+++.....-             ..|..-+...|+|+||||+|
T Consensus        81 lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~N  133 (372)
T cd07853          81 VVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGN  133 (372)
T ss_pred             EEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHH
Confidence            9999996 6888888654310             01223355579999999988

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.11  E-value=3.9e-10  Score=114.72  Aligned_cols=111  Identities=28%  Similarity=0.470  Sum_probs=89.3

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-Cc----EEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQ----EIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~----~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      .+|...+.||+|+||.||++.... +.    .+|+|.+.... ....+++.+|+.++.+++|+|++++++++.. ...++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            345666899999999999998754 32    58999886543 3445789999999999999999999999987 78899


Q ss_pred             EEeccCCCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      |+||+++|+|.++|.....  .+++..                ...|+|+||+|+|
T Consensus        86 v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~n  139 (279)
T cd05057          86 ITQLMPLGCLLDYVRNHKD--NIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARN  139 (279)
T ss_pred             EEecCCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcce
Confidence            9999999999999976432  244443                3478899999987

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.11  E-value=3.5e-10  Score=114.35  Aligned_cols=111  Identities=25%  Similarity=0.410  Sum_probs=89.1

Q ss_pred             cCCCCcceecccCceeEEEEEEcCC----cEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEG----QEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g----~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      ++|...++||+|+||.||+|...+.    ..||+|...... ....+.|.+|+.++.+++|||++++++++.. +..++|
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv   84 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV   84 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence            3466678999999999999987542    468999886543 4456789999999999999999999998864 567899


Q ss_pred             EeccCCCCHHHHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      +||+++|+|.++|....  ..++|.++.                .++|+||+|+|
T Consensus        85 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~n  137 (270)
T cd05056          85 MELAPLGELRSYLQVNK--YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARN  137 (270)
T ss_pred             EEcCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChhe
Confidence            99999999999997542  236666544                56799999987

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.11  E-value=3e-10  Score=118.40  Aligned_cols=113  Identities=22%  Similarity=0.162  Sum_probs=88.1

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEEE
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      +|...+.||+|+||.||++.... ++.+|+|.+....   ....+.+..|..++..+ +|++|+++.+++...+..++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            35667899999999999998865 7799999986432   22345677788888777 6899999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.+++..... .            ..|..-+...|+|+||||+|
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~N  131 (323)
T cd05616          81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDN  131 (323)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHH
Confidence            99999999999865431 0            01233355578999999987

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.11  E-value=1.5e-10  Score=117.99  Aligned_cols=121  Identities=24%  Similarity=0.337  Sum_probs=93.8

Q ss_pred             HHHHHHhccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHcc-CCCcccceEEEEEe--
Q 007129          496 WMAIANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQ--  571 (617)
Q Consensus       496 ~~~l~~at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~--  571 (617)
                      +..+..+.++|...+.||+|+||.||++.... ++.+|+|.+.... ...+++.+|+.++.++ +|+|++++++++..  
T Consensus        10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   88 (286)
T cd06638          10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD   88 (286)
T ss_pred             eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence            34556677889988999999999999998865 7899999886432 2236788999999999 69999999998853  


Q ss_pred             ---CCeEEEEEeccCCCCHHHHHhcCC-CCCcCCHH----------------HHHhhhhcccccCC
Q 007129          572 ---RDERMLIYEYLPNKSLNDFIFGFL-YTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       572 ---~~~~~lv~E~~~~GsL~~~L~~~~-~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                         ++..++||||+++++|.+++.... ....+++.                +...|+|+||+|+|
T Consensus        89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~n  154 (286)
T cd06638          89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNN  154 (286)
T ss_pred             cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHh
Confidence               456899999999999999886421 12234432                44578899999987

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.11  E-value=2.5e-10  Score=114.76  Aligned_cols=114  Identities=25%  Similarity=0.437  Sum_probs=92.1

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-----hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-----GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-----~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      ++|...+.||+|++|.||++.... ++.+|+|.+....     ....+.+.+|+.++.+++||||+++++++......++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            467788999999999999998754 8899999886321     1234578999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+||+++++|.+++..... .            ..|..-+...|+|+||+|+|
T Consensus        82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~n  134 (263)
T cd06625          82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGAN  134 (263)
T ss_pred             EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence            9999999999999865321 0            01233356678999999987

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.10  E-value=1.7e-10  Score=131.72  Aligned_cols=114  Identities=19%  Similarity=0.225  Sum_probs=94.1

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...++||+|+||.||++.... ++.||+|.++...   ....+.+..|+.++..++|+||+++++++......+|||
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            567778899999999999999864 8899999986432   233467899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++++|.++|..... .            ..|+..+...|+|+||||+|
T Consensus        84 Ey~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~N  134 (669)
T cd05610          84 EYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDN  134 (669)
T ss_pred             eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHH
Confidence            99999999999975321 0            11445566789999999987

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.10  E-value=5e-10  Score=112.69  Aligned_cols=114  Identities=20%  Similarity=0.259  Sum_probs=93.7

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ++|+..+.||.|+||.||++.... +..+|+|.+... .....+.+.+|+..++.++|+|++++++.+...+..++|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            357778899999999999999754 788999998643 233567899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +++++|.+++........+++.                +...|+|+||+|+|
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~n  132 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGN  132 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHh
Confidence            9999999999764322335554                34467899999887

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.10  E-value=3.6e-10  Score=117.76  Aligned_cols=108  Identities=19%  Similarity=0.182  Sum_probs=83.5

Q ss_pred             ceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHH-HHHccCCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          510 NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVL-LIAKLQHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~-~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      +.||+|+||.||++.... ++.||+|.+....   .....++..|.. ++..++||||+++++.+...+..++|+||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            379999999999999864 8899999986431   222345555554 56789999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+|.+++.....-             ..|..-+...|+|+||||+|
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~N  126 (323)
T cd05575          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPEN  126 (323)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHH
Confidence            9999999754310             01222345589999999987

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.10  E-value=4.5e-10  Score=114.42  Aligned_cols=110  Identities=25%  Similarity=0.331  Sum_probs=89.6

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      +|...++||+|+||.||++.... ++.||+|++....  ....+.+.+|+.++.+++|+|++++++++......++|+||
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~   81 (286)
T cd07847           2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY   81 (286)
T ss_pred             ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence            46667899999999999999875 8899999886432  22345688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHHHH----------------HhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWSFF----------------FSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~~r----------------~~i~~~~~~~~n  617 (617)
                      ++++.|..++....   .++|..+                ..|+|+||+|+|
T Consensus        82 ~~~~~l~~~~~~~~---~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~n  130 (286)
T cd07847          82 CDHTVLNELEKNPR---GVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPEN  130 (286)
T ss_pred             cCccHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhh
Confidence            99998888775432   3555543                357899999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.10  E-value=3.6e-10  Score=118.38  Aligned_cols=113  Identities=23%  Similarity=0.395  Sum_probs=90.4

Q ss_pred             CCCCcceecccCceeEEEEEEcC--------CcEEEEeecccC-chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCe
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE--------GQEIAAKRLSKS-SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDE  574 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~--------g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~  574 (617)
                      .|...+.||+|+||.||++....        ...||+|.++.. .....+++.+|+.++.++ +|+||+++++++.+...
T Consensus        13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~   92 (334)
T cd05100          13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP   92 (334)
T ss_pred             HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCc
Confidence            45667899999999999997521        236899988643 234457899999999999 89999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcCC-------------CCCcCCHHH----------------HHhhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFL-------------YTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~-------------~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      .++++||+++|+|.++|....             ....++|.+                ...|+|+||+|+|
T Consensus        93 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~N  164 (334)
T cd05100          93 LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARN  164 (334)
T ss_pred             eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccce
Confidence            999999999999999997532             123466653                3458999999988

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.10  E-value=2.6e-10  Score=118.83  Aligned_cols=112  Identities=22%  Similarity=0.167  Sum_probs=87.6

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccC-CCcccceEEEEEeCCeEEEEEe
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQ-HRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      |...+.||+|+||.||++.... ++.||+|.+...   .....+.+..|..++..+. |++|+++.+++...+..++|||
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME   81 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence            5566899999999999998764 889999998643   1233466888998888875 5778889999988899999999


Q ss_pred             ccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+++|+|.+++..... .            ..|..-+...|+|+||||+|
T Consensus        82 y~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~N  131 (323)
T cd05615          82 YVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDN  131 (323)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH
Confidence            9999999999875431 0            01333355678999999987

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.10  E-value=1.8e-10  Score=117.07  Aligned_cols=108  Identities=19%  Similarity=0.309  Sum_probs=88.4

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      |+..+.||+|+||.||+|.... +..||+|.++... ....+.+.+|+.++++++|+||+++++++......++|+||++
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG   85 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence            3445689999999999998754 7889999886432 3445689999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      +++|.+++....    +.+..                ...|+|+||+|+|
T Consensus        86 ~~~L~~~~~~~~----~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~n  131 (277)
T cd06642          86 GGSALDLLKPGP----LEETYIATILREILKGLDYLHSERKIHRDIKAAN  131 (277)
T ss_pred             CCcHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHhcCCeeccCCChhe
Confidence            999999986432    34433                3377889999987

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.10  E-value=4.4e-10  Score=112.87  Aligned_cols=103  Identities=28%  Similarity=0.404  Sum_probs=82.8

Q ss_pred             eecccCceeEEEEEEc---CCcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCC
Q 007129          511 KLGEGGFGPVYKGVLI---EGQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNK  585 (617)
Q Consensus       511 ~lG~G~fG~Vykg~l~---~g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~G  585 (617)
                      +||+|+||.||+|...   .+..+|+|.++...  ....++|.+|+.+++.++|+||+++++++. .+..++|+||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            6899999999999763   36789999986432  334578999999999999999999999885 55678999999999


Q ss_pred             CHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          586 SLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       586 sL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +|.+++....   .+++.                +...|+|+||+|+|
T Consensus        81 ~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~n  125 (257)
T cd05116          81 PLNKFLQKNK---HVTEKNITELVHQVSMGMKYLEETNFVHRDLAARN  125 (257)
T ss_pred             cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhh
Confidence            9999996543   23333                34467899999987

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.10  E-value=4.1e-10  Score=114.75  Aligned_cols=111  Identities=27%  Similarity=0.347  Sum_probs=89.5

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      |...+.||+|++|.||++.... +..||+|.++...  ....+.+.+|+.++..++|||++++++++..+...++|+||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (285)
T cd07861           2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFL   81 (285)
T ss_pred             ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecC
Confidence            5566799999999999999864 8899999986432  223467899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      + ++|.+++........+++.                +...|+|+||+|+|
T Consensus        82 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~n  131 (285)
T cd07861          82 S-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQN  131 (285)
T ss_pred             C-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHH
Confidence            7 7899988653322334443                45678899999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.10  E-value=2.9e-10  Score=113.57  Aligned_cols=106  Identities=31%  Similarity=0.453  Sum_probs=88.7

Q ss_pred             ceecccCceeEEEEEEcCCcEEEEeecccCch-hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCCHH
Q 007129          510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSG-QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLN  588 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~-~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~GsL~  588 (617)
                      ++||+|+||.||++...+++.||+|.+..... ...++|.+|+.++.+++|+||+++++++......++|+||+++++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            37999999999999987789999999875433 35578999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          589 DFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       589 ~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +++.....  .+++.                ++..|+|+||+|+|
T Consensus        81 ~~l~~~~~--~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~n  123 (251)
T cd05041          81 TFLRKKKN--RLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARN  123 (251)
T ss_pred             HHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcce
Confidence            99965421  23332                44478899999987

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.10  E-value=1.8e-10  Score=118.36  Aligned_cols=110  Identities=25%  Similarity=0.363  Sum_probs=91.3

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      ..|...+.||+|+||.||++... ++..+|+|.+........+.+.+|+.++.+++|||++++++.+...+..++|+||+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   98 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL   98 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence            45667789999999999999865 47889999986544444578899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++++|.+++....    +++.                +...|+|+||+|+|
T Consensus        99 ~~~~L~~~~~~~~----l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~N  145 (293)
T cd06647          99 AGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN  145 (293)
T ss_pred             CCCcHHHHHhhcC----CCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHH
Confidence            9999999996542    3333                44467889999887

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.10  E-value=2.8e-10  Score=115.13  Aligned_cols=115  Identities=24%  Similarity=0.402  Sum_probs=90.5

Q ss_pred             HhccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHcc-CCCcccceEEEEEeC------
Q 007129          501 NATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQR------  572 (617)
Q Consensus       501 ~at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~------  572 (617)
                      .+++.|...++||+|+||.||+|.... ++.||+|.+... .....++..|+.++.++ +|+|++++++++...      
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC-CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence            355667777899999999999998865 788999998643 33456789999999998 799999999998753      


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCCCCCcCCHHHH----------------HhhhhcccccCC
Q 007129          573 DERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFF----------------FSFENLSLVDRN  617 (617)
Q Consensus       573 ~~~~lv~E~~~~GsL~~~L~~~~~~~~l~w~~r----------------~~i~~~~~~~~n  617 (617)
                      ...++++||+++|+|.+++.... ...+.|...                ..|+|+||+|+|
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~n  141 (272)
T cd06637          82 DQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQN  141 (272)
T ss_pred             cEEEEEEEcCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHH
Confidence            45789999999999999998643 234555433                356778888876

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.09  E-value=2.2e-10  Score=119.75  Aligned_cols=113  Identities=19%  Similarity=0.202  Sum_probs=89.4

Q ss_pred             CCCCcceecccCceeEEEEEEc----CCcEEEEeecccCc----hhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeE
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLI----EGQEIAAKRLSKSS----GQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDER  575 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~----~g~~vAvK~l~~~~----~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~  575 (617)
                      +|...++||+|+||.||++...    .++.||+|.+.+..    ....+.+..|+.++..+ +|+||+++++++......
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            3566789999999999998753    47889999986421    22345688999999999 599999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++|+||+++|+|.+++.....-             ..|...+...|+|+||||+|
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~N  135 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLEN  135 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHH
Confidence            9999999999999999754310             11333456679999999987

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.09  E-value=4e-10  Score=115.42  Aligned_cols=113  Identities=25%  Similarity=0.266  Sum_probs=91.3

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      +|...+.||+|+||.||++.... ++.+|+|.+....   ....+.+.+|++++.+++|||++++++++......++|+|
T Consensus         2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   81 (290)
T cd05580           2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME   81 (290)
T ss_pred             ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence            56677899999999999998865 8899999986432   2335678999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+++++|.+++..... .            ..|...+...|+|+||+|+|
T Consensus        82 ~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~n  131 (290)
T cd05580          82 YVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPEN  131 (290)
T ss_pred             cCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHH
Confidence            9999999999976431 0            01222344578899999987

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.09  E-value=5.2e-10  Score=112.04  Aligned_cols=111  Identities=21%  Similarity=0.265  Sum_probs=89.9

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      |+..++||+|+||.+|++.... ++.+|+|.+...  .....+++.+|+.++++++|+|++++.+++...+..++|+||+
T Consensus         2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08218           2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYC   81 (256)
T ss_pred             ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecC
Confidence            5667899999999999998764 789999998632  3344568999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHHHH----------------HhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWSFF----------------FSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~~r----------------~~i~~~~~~~~n  617 (617)
                      ++++|.+++.... ...+++.+.                ..++|+||+|+|
T Consensus        82 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~n  131 (256)
T cd08218          82 EGGDLYKKINAQR-GVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQN  131 (256)
T ss_pred             CCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHH
Confidence            9999999997542 222444433                367788888876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.09  E-value=5.8e-10  Score=113.65  Aligned_cols=107  Identities=30%  Similarity=0.479  Sum_probs=85.9

Q ss_pred             CCcceecccCceeEEEEEEc-----CCcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeC--CeEEEE
Q 007129          507 SDKNKLGEGGFGPVYKGVLI-----EGQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR--DERMLI  578 (617)
Q Consensus       507 ~~~~~lG~G~fG~Vykg~l~-----~g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~--~~~~lv  578 (617)
                      ...+.||+|+||.||++.+.     ++..||+|.++... ....+.|.+|+.++.+++||||+++.+++...  ...+++
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI   86 (283)
T ss_pred             eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence            55679999999999886542     46789999987542 33457899999999999999999999988764  357899


Q ss_pred             EeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +||+++|+|.+++....    ++|.                +...|+|+||||+|
T Consensus        87 ~e~~~~~~l~~~~~~~~----l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~N  137 (283)
T cd05080          87 MEYVPLGSLRDYLPKHK----LNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARN  137 (283)
T ss_pred             ecCCCCCCHHHHHHHcC----CCHHHHHHHHHHHHHHHHHHHHCCeeccccChhe
Confidence            99999999999997542    4444                44478899999987

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.09  E-value=3.2e-10  Score=113.99  Aligned_cols=108  Identities=26%  Similarity=0.457  Sum_probs=84.5

Q ss_pred             ceecccCceeEEEEEEcC----CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEe-CCeEEEEEeccC
Q 007129          510 NKLGEGGFGPVYKGVLIE----GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ-RDERMLIYEYLP  583 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~----g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~-~~~~~lv~E~~~  583 (617)
                      +.||+|+||.||+|...+    ...+|+|.+... .....+.|.+|+.+++.++|||++++++++.. ....++++||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            468999999999998643    357999998643 33456789999999999999999999998764 455789999999


Q ss_pred             CCCHHHHHhcCCCCC--------------cCCHHHHHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTE--------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~--------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|+|.+++.......              .|.+-+...|+|+||+|+|
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~n  128 (262)
T cd05058          81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARN  128 (262)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcce
Confidence            999999997543210              1233345578999999998

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.09  E-value=5.3e-10  Score=112.44  Aligned_cols=110  Identities=25%  Similarity=0.317  Sum_probs=88.2

Q ss_pred             CCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      .|...++||+|+||.||++....+..+|+|.+.... ...+.|.+|+.++.+++|+|++++++++. ....+++|||+++
T Consensus         7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~   84 (260)
T cd05069           7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGK   84 (260)
T ss_pred             HeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCC
Confidence            355667999999999999998777789999886432 33467899999999999999999999874 5668899999999


Q ss_pred             CCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |+|.+++.... ...++|.                +...|+|+||+|+|
T Consensus        85 ~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~N  132 (260)
T cd05069          85 GSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAAN  132 (260)
T ss_pred             CCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcce
Confidence            99999997643 2234444                44467889999987

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.08  E-value=3.4e-10  Score=115.34  Aligned_cols=112  Identities=29%  Similarity=0.423  Sum_probs=88.6

Q ss_pred             CCCcceecccCceeEEEEEEcC------CcEEEEeecccCch-hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE------GQEIAAKRLSKSSG-QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~------g~~vAvK~l~~~~~-~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      |...++||+|+||.||+|....      ++.||+|+++.... ...+.|.+|+.++.+++||||+++++++......+++
T Consensus         7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~   86 (283)
T cd05091           7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMI   86 (283)
T ss_pred             HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEE
Confidence            4445689999999999998642      46899999974432 3346799999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCC-------------CCCcCCHH----------------HHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFL-------------YTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~-------------~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +||+++++|.++|....             .+..+++.                +...|+|+||||.|
T Consensus        87 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~N  154 (283)
T cd05091          87 FSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRN  154 (283)
T ss_pred             EEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhh
Confidence            99999999999985321             01224443                33467999999988

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.08  E-value=3e-10  Score=121.61  Aligned_cols=107  Identities=13%  Similarity=0.107  Sum_probs=87.5

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      ..|...++||+|+||.||++.... ++.||+|...      .+.+.+|+.++++++|||||++++++......++|+|++
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~  165 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY  165 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence            568888999999999999998755 7899999653      245789999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      . ++|.+++.....-             ..|...+...|+|+||||+|
T Consensus       166 ~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~N  212 (391)
T PHA03212        166 K-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAEN  212 (391)
T ss_pred             C-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHh
Confidence            5 7899888654310             11333355679999999998

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.08  E-value=6e-10  Score=111.72  Aligned_cols=110  Identities=25%  Similarity=0.421  Sum_probs=88.7

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEe-CCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ-RDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~-~~~~~lv~E~~  582 (617)
                      ++|...+.||+|+||.||++.. .+..+|+|.++..  ...+.|.+|+.++++++|+|++++++++.. .+..++++||+
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~   82 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   82 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence            3566678999999999999976 4778999988643  235679999999999999999999997654 46689999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      ++++|.+++.... ...++|..+.                .|+|+||+|+|
T Consensus        83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~n  132 (256)
T cd05082          83 AKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARN  132 (256)
T ss_pred             CCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchhe
Confidence            9999999997643 2335555443                58899999987

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.08  E-value=5.6e-10  Score=111.70  Aligned_cols=108  Identities=33%  Similarity=0.532  Sum_probs=89.4

Q ss_pred             ceecccCceeEEEEEEcC----CcEEEEeecccCchh-hHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          510 NKLGEGGFGPVYKGVLIE----GQEIAAKRLSKSSGQ-GMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~----g~~vAvK~l~~~~~~-~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      +.||+|+||.||++....    +..+++|.+...... ..+++.+|+..+..++|+|++++++++......++|+||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            479999999999999864    778999999754332 367899999999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCCC------CCcCCHH----------------HHHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLY------TEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~------~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++|.+++.....      ...+++.                +...|+|+||+|+|
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~n  135 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARN  135 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcce
Confidence            999999987521      1334554                44467889999987

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.08  E-value=4.9e-10  Score=116.21  Aligned_cols=114  Identities=25%  Similarity=0.404  Sum_probs=90.6

Q ss_pred             cCCCCcceecccCceeEEEEEEc--------CCcEEEEeecccC-chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCC
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI--------EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRD  573 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~--------~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~  573 (617)
                      ++|...++||+|+||.||++...        ....+|+|.++.. ......++.+|+.++.++ +||||+++++++....
T Consensus        12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (314)
T cd05099          12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG   91 (314)
T ss_pred             HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence            45667789999999999999742        2456899988743 334457899999999999 6999999999999989


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCC-------------CCcCCHHH----------------HHhhhhcccccCC
Q 007129          574 ERMLIYEYLPNKSLNDFIFGFLY-------------TEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       574 ~~~lv~E~~~~GsL~~~L~~~~~-------------~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      ..++++||+++|+|.++|.....             ...++|.+                ...|+|+||+|+|
T Consensus        92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N  164 (314)
T cd05099          92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARN  164 (314)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccccee
Confidence            99999999999999999975321             12355543                3477899999988

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.08  E-value=6.5e-10  Score=112.09  Aligned_cols=112  Identities=22%  Similarity=0.399  Sum_probs=88.6

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCch---------hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG---------QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDER  575 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~---------~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~  575 (617)
                      |.....||+|+||.||+|.... ++.+|+|.+.....         ...+.+.+|+.++.+++||||+++++++.+....
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            3445789999999999998754 78999998854321         1235688999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++++||+++++|.+++..... .            ..+...+...|+|+||+|+|
T Consensus        82 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~n  136 (267)
T cd06628          82 NIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGAN  136 (267)
T ss_pred             EEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHH
Confidence            999999999999999965421 0            01233455578999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.08  E-value=2.8e-10  Score=117.23  Aligned_cols=113  Identities=25%  Similarity=0.320  Sum_probs=89.5

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      +.|...++||+|+||.||++.... ++.||+|.++... ......+.+|+.++.+++||||+++++++......++|+||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            456677899999999999998764 7899999986432 23345678999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++ ++|.+++......              ..|..-+...|+|+||+|+|
T Consensus        86 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~N  134 (301)
T cd07873          86 LD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQN  134 (301)
T ss_pred             cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHH
Confidence            97 6999998764321              01222345578899999987

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.08  E-value=5.2e-10  Score=114.89  Aligned_cols=109  Identities=22%  Similarity=0.286  Sum_probs=89.0

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCchh-----hHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQ-----GMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~-----~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      |...+.||+|+||.||+|.... ++.||+|.++.....     ....+..|+.++.+++|+|++++++++......++||
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF   81 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence            5556789999999999999764 889999999754322     2346788999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCcCCHHHH----------------HhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEHFFWSFF----------------FSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~l~w~~r----------------~~i~~~~~~~~n  617 (617)
                      ||+ .|+|.++|.+..  ..+++...                ..|+|+||+|+|
T Consensus        82 e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~n  132 (298)
T cd07841          82 EFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNN  132 (298)
T ss_pred             ccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhh
Confidence            999 999999997643  23555543                356789999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.08  E-value=5.6e-10  Score=113.26  Aligned_cols=112  Identities=19%  Similarity=0.337  Sum_probs=90.1

Q ss_pred             CCCcceecccCceeEEEEEEc-CCcEEEEeecccC-chhhHHHHHHHHHHHHccC---CCcccceEEEEEeCCeEEEEEe
Q 007129          506 FSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQ---HRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~---H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      |+..+.||+|+||.||++... +++.+|+|.++.. .....+++.+|+.++++++   |||++++++++......++|+|
T Consensus         3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e   82 (277)
T cd06917           3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME   82 (277)
T ss_pred             hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence            555678999999999999975 4889999998643 3345578899999999986   9999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+++++|.+++......            ..|..-+...|+|+||+|+|
T Consensus        83 ~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~n  131 (277)
T cd06917          83 YAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAAN  131 (277)
T ss_pred             cCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHH
Confidence            99999999998654210            01223356678999999987

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.08  E-value=2.4e-10  Score=117.33  Aligned_cols=104  Identities=22%  Similarity=0.285  Sum_probs=88.0

Q ss_pred             ceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCCHH
Q 007129          510 NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLN  588 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~GsL~  588 (617)
                      ..||+|+||.||++.... +..||+|.+........+.+.+|+..+..++|+|++++++.+..++..++|+||+++++|.
T Consensus        28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~  107 (292)
T cd06658          28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALT  107 (292)
T ss_pred             hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHH
Confidence            579999999999998754 8899999987655555678999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          589 DFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       589 ~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +++....    +++.                +...|+|+||+|+|
T Consensus       108 ~~~~~~~----l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~N  148 (292)
T cd06658         108 DIVTHTR----MNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDS  148 (292)
T ss_pred             HHHhcCC----CCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHH
Confidence            9885432    3333                44468899999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.07  E-value=2.9e-10  Score=118.57  Aligned_cols=108  Identities=19%  Similarity=0.170  Sum_probs=82.9

Q ss_pred             ceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHH-HHHccCCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          510 NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVL-LIAKLQHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~-~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      +.||+|+||.||++.... ++.+|+|.+....   .....++..|.. ++..++|+||+++++++...+..++|+||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            379999999999999865 7789999986421   122334455544 56778999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+|.+++.....-             ..|..-+...|+|+||||+|
T Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~N  126 (325)
T cd05602          81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPEN  126 (325)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHH
Confidence            9999999764321             01233355689999999987

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.07  E-value=2.5e-10  Score=119.43  Aligned_cols=111  Identities=15%  Similarity=0.266  Sum_probs=86.7

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeC-----CeEEE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR-----DERML  577 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~-----~~~~l  577 (617)
                      |...++||+|+||.||++.... ++.||||++...  .......+.+|+.++.+++||||+++.+++...     ...++
T Consensus         2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l   81 (338)
T cd07859           2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV   81 (338)
T ss_pred             eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence            5566899999999999998764 889999998642  223345789999999999999999999988643     24799


Q ss_pred             EEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+||++ ++|.+++.....-             ..|.+-+...|+|+||||+|
T Consensus        82 v~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~N  133 (338)
T cd07859          82 VFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKN  133 (338)
T ss_pred             EEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH
Confidence            999995 7899988654210             12444566789999999987

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.07  E-value=6.5e-10  Score=111.19  Aligned_cols=111  Identities=17%  Similarity=0.213  Sum_probs=90.4

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      |...+.||+|+||.||++.... ++.+|+|.+...  .....+.+.+|+.++++++|||++++++.+...+..++|+||+
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08220           2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYA   81 (256)
T ss_pred             ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecC
Confidence            5567899999999999998754 788999998643  2344578999999999999999999999999899999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHHHH----------------HhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWSFF----------------FSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~~r----------------~~i~~~~~~~~n  617 (617)
                      ++++|.+++.... ...+++...                ..|+|+||+|+|
T Consensus        82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~n  131 (256)
T cd08220          82 PGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQN  131 (256)
T ss_pred             CCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence            9999999997643 223455433                357788888876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.07  E-value=3.4e-10  Score=130.21  Aligned_cols=116  Identities=17%  Similarity=0.196  Sum_probs=90.7

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEe--CCeEE
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ--RDERM  576 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~--~~~~~  576 (617)
                      ..+.|...++||+|+||.||++.... +..+|+|.+...  .......|..|+.++.+++|||||++++++..  ....+
T Consensus        11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly   90 (1021)
T PTZ00266         11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY   90 (1021)
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence            44678888899999999999999865 678999988632  33445789999999999999999999998754  35688


Q ss_pred             EEEeccCCCCHHHHHhcCCC-CCcCCHH----------------HHH-------hhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLY-TEHFFWS----------------FFF-------SFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~-~~~l~w~----------------~r~-------~i~~~~~~~~n  617 (617)
                      |||||+++|+|.++|..... ...+++.                +..       .|+|+||||+|
T Consensus        91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeN  155 (1021)
T PTZ00266         91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQN  155 (1021)
T ss_pred             EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHH
Confidence            99999999999999975311 1223433                332       28999999987

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.07  E-value=2.8e-11  Score=124.55  Aligned_cols=112  Identities=26%  Similarity=0.346  Sum_probs=90.4

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHH--HHHHHHHHccC-CCcccceEEEEEeCC-eEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEF--ENEVLLIAKLQ-HRNLVKLIGCCTQRD-ERMLI  578 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f--~~Ev~~l~~l~-H~nlv~l~g~~~~~~-~~~lv  578 (617)
                      +.|...++||.|.||.||+++-.. +..||||++++.-. ..+|.  ++|+..|.+|. |||||+|.....+.. .+++|
T Consensus        10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~-s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV   88 (538)
T KOG0661|consen   10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFY-SWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV   88 (538)
T ss_pred             HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhc-cHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence            445666899999999999998765 88999999975322 23433  68999999998 999999999998887 89999


Q ss_pred             EeccCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||||+ -+|.+.+.++++-              .-|+..++-.+-|||+||.|
T Consensus        89 fE~Md-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPEN  140 (538)
T KOG0661|consen   89 FEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPEN  140 (538)
T ss_pred             HHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhh
Confidence            99995 5899998776321              12566678888999999988

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.07  E-value=3.2e-10  Score=114.50  Aligned_cols=108  Identities=30%  Similarity=0.475  Sum_probs=86.6

Q ss_pred             ceecccCceeEEEEEEcC-------CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          510 NKLGEGGFGPVYKGVLIE-------GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-------g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      +.||+|+||.||++...+       +..+|+|.+.... .....+|.+|+.+++.++||||+++++++......++|+||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            368999999999998753       2578999886432 24457899999999999999999999999998999999999


Q ss_pred             cCCCCHHHHHhcCCC----CCcCCHHH----------------HHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLY----TEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~----~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      +++|+|.++|.+...    ...++|.+                ...|+|+||+|+|
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~n  136 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARN  136 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChhe
Confidence            999999999975321    12345543                4457789999987

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.07  E-value=3.8e-10  Score=112.84  Aligned_cols=110  Identities=36%  Similarity=0.560  Sum_probs=90.2

Q ss_pred             CCcceecccCceeEEEEEEcC-C----cEEEEeecccCchh-hHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          507 SDKNKLGEGGFGPVYKGVLIE-G----QEIAAKRLSKSSGQ-GMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       507 ~~~~~lG~G~fG~Vykg~l~~-g----~~vAvK~l~~~~~~-~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ...+.||+|+||.||++...+ +    ..||+|.+...... ..+.+..|+..+..++|+|++++++++...+..++++|
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            345789999999999999865 3    78999999754332 56789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |+++++|.+++...... .+++.                +...++|+||+|+|
T Consensus        82 ~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~n  133 (258)
T smart00219       82 YMEGGDLLDYLRKNRPK-ELSLSDLLSFALQIARGMEYLESKNFIHRDLAARN  133 (258)
T ss_pred             ccCCCCHHHHHHhhhhc-cCCHHHHHHHHHHHHHHHHHHhcCCeeecccccce
Confidence            99999999999764321 14444                44467889999987

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.07  E-value=7.6e-10  Score=113.00  Aligned_cols=113  Identities=26%  Similarity=0.354  Sum_probs=95.4

Q ss_pred             hccCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      .++.|...+.||+|+||.||++... .+..+++|.+..... ..+++.+|++++.+++|+|++++++++......++++|
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   95 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME   95 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence            4566777789999999999999987 488999999875433 56789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      |+++++|.+++....  ..+++..+.                .|+|+||+|+|
T Consensus        96 ~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~n  146 (286)
T cd06614          96 YMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDN  146 (286)
T ss_pred             ccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhh
Confidence            999999999998753  246666544                57788888887

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.07  E-value=6e-10  Score=113.45  Aligned_cols=110  Identities=27%  Similarity=0.402  Sum_probs=85.5

Q ss_pred             CCCCcceecccCceeEEEEEEcC-Cc----EEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQ----EIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~----~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      +|...+.||+|+||.||++.... ++    .+++|.+.... .....++..|+..++++.||||+++++++. ....+++
T Consensus         8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i   86 (279)
T cd05111           8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLV   86 (279)
T ss_pred             hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEE
Confidence            45666799999999999998743 43    47888876432 233467888999999999999999999875 4557789


Q ss_pred             EeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +||+++|+|.+++....  ..++|.                +...|+|+||+|+|
T Consensus        87 ~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~n  139 (279)
T cd05111          87 TQLSPLGSLLDHVRQHR--DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARN  139 (279)
T ss_pred             EEeCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcce
Confidence            99999999999997643  234444                44468899999988

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.07  E-value=7.7e-10  Score=111.19  Aligned_cols=109  Identities=24%  Similarity=0.380  Sum_probs=90.5

Q ss_pred             CCCcceecccCceeEEEEEEc-CCcEEEEeecccCch--hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          506 FSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSG--QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~--~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      |...+.||+|+||.||++... +++.+++|.++....  ...+++..|+.+++.++|+||+++++++...+..++|+||+
T Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06626           2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC   81 (264)
T ss_pred             ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence            455679999999999999876 488999999875433  35678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++++|.+++....   .+++.                +...|+|+||+|+|
T Consensus        82 ~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~n  129 (264)
T cd06626          82 SGGTLEELLEHGR---ILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPAN  129 (264)
T ss_pred             CCCcHHHHHhhcC---CCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH
Confidence            9999999997653   13333                33467889999876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.07  E-value=2.7e-11  Score=117.55  Aligned_cols=110  Identities=21%  Similarity=0.331  Sum_probs=95.0

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      |....+||+|++|.|||+..+. |+.+|+|.+..  ..+.++..+|+.+|.+...+++|+.+|.+.....+++|||||--
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA  112 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA  112 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence            4556799999999999998875 99999999864  35678999999999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||..+.++-.++.              +-|.+-+-++-||+||||-|
T Consensus       113 GSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGN  159 (502)
T KOG0574|consen  113 GSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGN  159 (502)
T ss_pred             CcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhccccc
Confidence            9999998765421              12567788899999999977

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.07  E-value=8.6e-10  Score=114.37  Aligned_cols=112  Identities=21%  Similarity=0.240  Sum_probs=92.2

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch---hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG---QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~---~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      +|...+.||+|+||.||++.... ++.+|+|.+.....   ...+.+..|++++..++|+||+++++.+......++|+|
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   81 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD   81 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence            56677899999999999999876 88999999875322   245678999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |+++++|.+++.... ...+++.                +...|+|+||+|+|
T Consensus        82 ~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N  133 (316)
T cd05574          82 YCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPEN  133 (316)
T ss_pred             ecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHH
Confidence            999999999987542 2233433                44567899999987

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.06  E-value=3.2e-10  Score=117.66  Aligned_cols=108  Identities=23%  Similarity=0.372  Sum_probs=89.6

Q ss_pred             cceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCC
Q 007129          509 KNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNK  585 (617)
Q Consensus       509 ~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~G  585 (617)
                      .+.||.|.||+||-|+.+. |+.||||.+.+.  .....+++++|+.++.+++||.||.|...|...+..+.|||-+ +|
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~G  647 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HG  647 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cc
Confidence            4799999999999999865 999999999754  3455688999999999999999999999999999999999999 67


Q ss_pred             CHHHHHhcCCCCCc---------------CCHHHHHhhhhcccccCC
Q 007129          586 SLNDFIFGFLYTEH---------------FFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       586 sL~~~L~~~~~~~~---------------l~w~~r~~i~~~~~~~~n  617 (617)
                      +..+.|.++.+.++               |..-+-.+|+|=||||.|
T Consensus       648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPEN  694 (888)
T KOG4236|consen  648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPEN  694 (888)
T ss_pred             hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchh
Confidence            77777776543222               334455689999999987

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.06  E-value=7.3e-10  Score=112.29  Aligned_cols=109  Identities=19%  Similarity=0.251  Sum_probs=89.9

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      +|...+.||.|+||.||++.... ++.+|+|.+.... .....++.+|+.++++++|+|++++.+++.+....++|+||+
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC   81 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence            45666789999999999999864 8899999986432 344567899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      ++++|.+++...    .+++..                ...|+|+||+|+|
T Consensus        82 ~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~n  128 (274)
T cd06609          82 GGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAAN  128 (274)
T ss_pred             CCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH
Confidence            999999999764    234443                3357888888876

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.06  E-value=1.9e-10  Score=115.35  Aligned_cols=112  Identities=23%  Similarity=0.416  Sum_probs=90.1

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch-hhH-HHHHHHHHHHHccCCCc-ccceEEEEEeCC------e
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG-QGM-EEFENEVLLIAKLQHRN-LVKLIGCCTQRD------E  574 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~-~~~-~~f~~Ev~~l~~l~H~n-lv~l~g~~~~~~------~  574 (617)
                      .|...++||+|.||.||+|+... |+.||+|+++-... ++. ..-.+|+.++.+++|+| +|+|.+++...+      .
T Consensus        12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~   91 (323)
T KOG0594|consen   12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK   91 (323)
T ss_pred             HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence            34555689999999999999865 88999999974322 222 45689999999999999 999999998877      6


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCC-----------------CcCCHHHHHhhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLYT-----------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~~-----------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      .+||+||+. -+|..|+....+.                 .-++..++-+|+||||||.|
T Consensus        92 l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQN  150 (323)
T KOG0594|consen   92 LYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQN  150 (323)
T ss_pred             EEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcce
Confidence            889999995 5999999765421                 12456688899999999988

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.06  E-value=1e-09  Score=110.76  Aligned_cols=111  Identities=26%  Similarity=0.436  Sum_probs=88.5

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-----hhhHHHHHHHHHHHHccCCCcccceEEEEEe--CCeE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-----GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ--RDER  575 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-----~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~--~~~~  575 (617)
                      .+|...+.||+|+||.||++.... +..+|+|.+....     .+..+.+.+|+.++.+++||||+++++++..  ....
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            467778899999999999998765 8899999885321     2334678999999999999999999998865  3567


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++++||+++++|.+++....   .+++.                +...|+|+||+|+|
T Consensus        82 ~l~~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~n  136 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGAN  136 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHH
Confidence            89999999999999997542   23333                34577889999876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.05  E-value=7.3e-10  Score=112.10  Aligned_cols=109  Identities=20%  Similarity=0.367  Sum_probs=87.0

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCch----------hhHHHHHHHHHHHHccCCCcccceEEEEEeCCe
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG----------QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDE  574 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~----------~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~  574 (617)
                      |...+.||+|+||.||+|.... ++.+|+|.++....          ...+.+.+|+.++..++|+|++++++++...+.
T Consensus         3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   82 (272)
T cd06629           3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY   82 (272)
T ss_pred             eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence            3456789999999999998754 88999998753111          113568899999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCCCcCCHHHH----------------HhhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLYTEHFFWSFF----------------FSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~~~~l~w~~r----------------~~i~~~~~~~~n  617 (617)
                      .++|+||+++|+|.+++....   .+++..+                ..++|+||+|+|
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~n  138 (272)
T cd06629          83 LSIFLEYVPGGSIGSCLRTYG---RFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADN  138 (272)
T ss_pred             eEEEEecCCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhh
Confidence            999999999999999997642   3444432                356788998876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.05  E-value=9.9e-10  Score=110.22  Aligned_cols=104  Identities=34%  Similarity=0.481  Sum_probs=83.9

Q ss_pred             ceecccCceeEEEEEEcC-C---cEEEEeecccCch-hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          510 NKLGEGGFGPVYKGVLIE-G---QEIAAKRLSKSSG-QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-g---~~vAvK~l~~~~~-~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      ++||+|+||.||+|.+.. +   ..+|+|.+..... ...+++.+|+.++.++.|+|++++++++. .+..++|+||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            479999999999998743 2   6899999875433 34568999999999999999999999875 5678999999999


Q ss_pred             CCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |+|.++|....   .+++.                +...|+|+||+|+|
T Consensus        80 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~n  125 (257)
T cd05060          80 GPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARN  125 (257)
T ss_pred             CcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccce
Confidence            99999997643   23333                44468899999987

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.05  E-value=3.3e-10  Score=124.96  Aligned_cols=116  Identities=17%  Similarity=0.175  Sum_probs=91.0

Q ss_pred             hccCCCCcceecccCceeEEEEEEc-CCcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCC-----
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD-----  573 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~-----  573 (617)
                      ..++|...++||+|+||.||++... +++.||||.+...  .......+.+|+..+..++|+|+++++..+....     
T Consensus        30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~  109 (496)
T PTZ00283         30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE  109 (496)
T ss_pred             cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence            3467888899999999999999875 4899999998643  3445567899999999999999999987765432     


Q ss_pred             ---eEEEEEeccCCCCHHHHHhcCCC-CCcC----------------CHHHHHhhhhcccccCC
Q 007129          574 ---ERMLIYEYLPNKSLNDFIFGFLY-TEHF----------------FWSFFFSFENLSLVDRN  617 (617)
Q Consensus       574 ---~~~lv~E~~~~GsL~~~L~~~~~-~~~l----------------~w~~r~~i~~~~~~~~n  617 (617)
                         ..++||||+++|+|.++|..... ...+                ..-+...|+|+||||+|
T Consensus       110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~N  173 (496)
T PTZ00283        110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSAN  173 (496)
T ss_pred             cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHH
Confidence               36799999999999999975321 1223                33456689999999988

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.05  E-value=5.1e-10  Score=111.92  Aligned_cols=110  Identities=24%  Similarity=0.300  Sum_probs=92.4

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      ++|...++||+|+||.||++...+ ++.+++|.+.....  .++|.+|+.++++++|+|++++++++......++++||+
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~   80 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC   80 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence            567778899999999999999876 78999999864322  678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      ++++|.+++....  ..++|..                ..+|+|+||+|+|
T Consensus        81 ~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~n  129 (256)
T cd06612          81 GAGSVSDIMKITN--KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGN  129 (256)
T ss_pred             CCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcce
Confidence            9999999996532  2344443                3367889999887

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.05  E-value=4.9e-10  Score=117.56  Aligned_cols=90  Identities=24%  Similarity=0.475  Sum_probs=73.5

Q ss_pred             cCCCCcceecccCceeEEEEEEcC------CcEEEEeecccCc-hhhHHHHHHHHHHHHcc-CCCcccceEEEEEeC-Ce
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE------GQEIAAKRLSKSS-GQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQR-DE  574 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~------g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~-~~  574 (617)
                      +.|...+.||+|+||.||++...+      ++.||+|+++... ....+.+..|+.++.++ +|+||++++++|... ..
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~   86 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP   86 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence            457777899999999999997532      4689999987432 23346788999999999 899999999988654 56


Q ss_pred             EEEEEeccCCCCHHHHHhc
Q 007129          575 RMLIYEYLPNKSLNDFIFG  593 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~  593 (617)
                      .++++||+++|+|.++|..
T Consensus        87 ~~~v~ey~~~~~L~~~i~~  105 (337)
T cd05054          87 LMVIVEYCKFGNLSNYLRS  105 (337)
T ss_pred             EEEEEecCCCCCHHHHHHh
Confidence            7899999999999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.05  E-value=7.8e-10  Score=112.65  Aligned_cols=109  Identities=20%  Similarity=0.256  Sum_probs=89.8

Q ss_pred             CCCcceecccCceeEEEEEEc-CCcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          506 FSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      |...+.||+|+||.||++... +++.||+|++....  ....+.+.+|+.++++++|+|++++++++..+...++|+||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   81 (286)
T cd07832           2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM   81 (286)
T ss_pred             ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence            556678999999999999985 48899999987543  333568999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHHHH----------------HhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWSFF----------------FSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~~r----------------~~i~~~~~~~~n  617 (617)
                       +++|.+++....  ..+++.++                ..|+|+||+|+|
T Consensus        82 -~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~n  129 (286)
T cd07832          82 -PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPAN  129 (286)
T ss_pred             -CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHH
Confidence             999999987543  23455433                467889999876

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.05  E-value=2.4e-10  Score=128.73  Aligned_cols=117  Identities=28%  Similarity=0.395  Sum_probs=95.1

Q ss_pred             HhccCCCCcceecccCceeEEEEEEcC--------CcEEEEeecccC-chhhHHHHHHHHHHHHcc-CCCcccceEEEEE
Q 007129          501 NATENFSDKNKLGEGGFGPVYKGVLIE--------GQEIAAKRLSKS-SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCT  570 (617)
Q Consensus       501 ~at~~f~~~~~lG~G~fG~Vykg~l~~--------g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~  570 (617)
                      ...+++...+.||+|.||.|++|.+..        ...||||.++.. .....+.+..|+.+|..+ +|+|++.|+|+|.
T Consensus       293 ~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t  372 (609)
T KOG0200|consen  293 IPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACT  372 (609)
T ss_pred             echhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeec
Confidence            344555556699999999999998742        346999999754 334567899999999998 6999999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHhcCC---------C---C-----------------CcCCHHHHHhhhhcccccCC
Q 007129          571 QRDERMLIYEYLPNKSLNDFIFGFL---------Y---T-----------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       571 ~~~~~~lv~E~~~~GsL~~~L~~~~---------~---~-----------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      .+++.++|.||+++|+|.+||+..+         .   .                 .-+.|-....++||||||||
T Consensus       373 ~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRN  448 (609)
T KOG0200|consen  373 QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARN  448 (609)
T ss_pred             cCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhh
Confidence            9999999999999999999999876         0   0                 01345567789999999998

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.05  E-value=7.1e-11  Score=120.62  Aligned_cols=113  Identities=17%  Similarity=0.251  Sum_probs=95.6

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      .|+..+.||+|+||.||||.... ++.||+|.+.-. .....++.++|+.++++++++|+.+.+|.+..+..++++||||
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~   93 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC   93 (467)
T ss_pred             ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence            35555799999999999999865 789999999743 4455688999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      .+|++.+.|..... .            ..|+.-+--+.||+||||.|
T Consensus        94 ~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaan  141 (467)
T KOG0201|consen   94 GGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAAN  141 (467)
T ss_pred             cCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccc
Confidence            99999999975432 1            13566677789999999998

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.05  E-value=7.7e-10  Score=113.24  Aligned_cols=113  Identities=24%  Similarity=0.306  Sum_probs=89.9

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch-hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG-QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~-~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++++|...++||+|+||.||++.... ++.+|+|.+..... .....+.+|+.++..++|+|++++.+++......++|+
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            35678888899999999999998754 88999999864332 22346789999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCcCCH----------------HHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      ||++ ++|.+++.....  .+.+                .+...|+|+||+|+|
T Consensus        83 e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~N  133 (291)
T cd07870          83 EYMH-TDLAQYMIQHPG--GLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQN  133 (291)
T ss_pred             eccc-CCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHH
Confidence            9995 788887765321  1222                244578999999987

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.04  E-value=1.2e-10  Score=117.26  Aligned_cols=112  Identities=20%  Similarity=0.325  Sum_probs=89.3

Q ss_pred             CCCcceecccCceeEEEEEE-cCCcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          506 FSDKNKLGEGGFGPVYKGVL-IEGQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l-~~g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      |...+.||+|.||+|-++.- ..|++||||.+++.   +.++.-..++|+++|+.|+||||+.++.++...+...|||||
T Consensus        55 yE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEY  134 (668)
T KOG0611|consen   55 YEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEY  134 (668)
T ss_pred             HHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEe
Confidence            44456899999999999876 45999999999754   345556789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCC-------------cCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTE-------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~-------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      ..+|.|.+|+....+-.             ..-+.+.-+++|+|||-.|
T Consensus       135 aS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLEN  183 (668)
T KOG0611|consen  135 ASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLEN  183 (668)
T ss_pred             cCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhh
Confidence            99999999997643210             1122344467888888655

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.04  E-value=7.4e-10  Score=110.90  Aligned_cols=108  Identities=25%  Similarity=0.373  Sum_probs=87.1

Q ss_pred             CCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      +|...+.||+|+||.||++.. .++.+|+|.++..  ...+.|.+|+.++.+++|||++++++++... ..++++||+++
T Consensus         7 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~   82 (254)
T cd05083           7 KLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSK   82 (254)
T ss_pred             HceeeeeeccCCCCceEeccc-CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCC
Confidence            466678999999999999975 6778999998643  2346799999999999999999999998654 57899999999


Q ss_pred             CCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      |+|.+++.... ...+++..                ...++|+||+|+|
T Consensus        83 ~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~n  130 (254)
T cd05083          83 GNLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARN  130 (254)
T ss_pred             CCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcce
Confidence            99999997653 22345543                3467889999987

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.03  E-value=4.2e-10  Score=114.72  Aligned_cols=110  Identities=24%  Similarity=0.296  Sum_probs=89.2

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      +|...++||+|+||.||++...+ ++.+|+|++....  ....+.+.+|++++..++|||++++++++......++|+||
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   81 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF   81 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence            46667899999999999999865 8899999886432  22346789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      ++++.|.+++....   .++|..                ...|+|+||+|+|
T Consensus        82 ~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~n  130 (286)
T cd07846          82 VDHTVLDDLEKYPN---GLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPEN  130 (286)
T ss_pred             CCccHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHH
Confidence            99999988775432   245554                3467788888876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.03  E-value=6.5e-10  Score=113.03  Aligned_cols=111  Identities=25%  Similarity=0.403  Sum_probs=88.1

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCc----EEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQ----EIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~----~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      ++|...++||+|+||.||+|... ++.    .||+|.++.. .....+++.+|+.++..++|+|++++++++.. ...++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l   85 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL   85 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence            45677789999999999999864 344    4899998643 33445789999999999999999999999975 45779


Q ss_pred             EEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++||+++|+|.++++....  .+.+.                +...|+|+||+|+|
T Consensus        86 ~~~~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~N  139 (279)
T cd05109          86 VTQLMPYGCLLDYVRENKD--RIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARN  139 (279)
T ss_pred             EEEcCCCCCHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccccccce
Confidence            9999999999999976432  23333                44578999999998

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.03  E-value=5.7e-10  Score=114.79  Aligned_cols=104  Identities=22%  Similarity=0.265  Sum_probs=87.2

Q ss_pred             ceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCCHH
Q 007129          510 NKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLN  588 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~GsL~  588 (617)
                      .+||+|+||.||++... +++.||+|.+........+.+.+|+..+..++|||++++++++..++..++|+||+++++|.
T Consensus        27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~  106 (297)
T cd06659          27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALT  106 (297)
T ss_pred             hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHH
Confidence            47999999999999875 48899999986544445577899999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          589 DFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       589 ~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      .++....    +++.                +...|+|+||+|+|
T Consensus       107 ~~~~~~~----~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~N  147 (297)
T cd06659         107 DIVSQTR----LNEEQIATVCESVLQALCYLHSQGVIHRDIKSDS  147 (297)
T ss_pred             HHHhhcC----CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence            9885432    3443                34477899999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.03  E-value=8.2e-10  Score=112.37  Aligned_cols=113  Identities=17%  Similarity=0.207  Sum_probs=86.8

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHH-HHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLL-IAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~-l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ++|...+.||+|+||.||++.... |+.||+|+++... .....++..|+.. ++.++|||++++++++...+..++++|
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            357777899999999999999864 8899999987432 2334456666664 566789999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCC-CCCcCCHHH-----------------HHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFL-YTEHFFWSF-----------------FFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~-~~~~l~w~~-----------------r~~i~~~~~~~~n  617 (617)
                      |++ |+|.+++.... ....+++..                 +..|+|+||+|+|
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~n  134 (283)
T cd06617          81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSN  134 (283)
T ss_pred             hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHH
Confidence            996 78988886532 223455543                 3478899999876

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.03  E-value=5.1e-10  Score=117.06  Aligned_cols=112  Identities=13%  Similarity=0.054  Sum_probs=82.6

Q ss_pred             hccCCCCcceecccCceeEEEEEEc--CCcEEEEeecccC-----chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCe
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLI--EGQEIAAKRLSKS-----SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDE  574 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~--~g~~vAvK~l~~~-----~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~  574 (617)
                      ..+.|...+.||+|+||+||++...  .++.+|||++...     .....+.|.+|+.++.+++|+|++..+..   .+.
T Consensus        16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~   92 (365)
T PRK09188         16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGK   92 (365)
T ss_pred             ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCC
Confidence            3467888899999999999999875  3677899987532     12234679999999999999999964322   246


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCC-------CcCCHHHHHhhhhccc-ccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLYT-------EHFFWSFFFSFENLSL-VDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~~-------~~l~w~~r~~i~~~~~-~~~n  617 (617)
                      .+|||||+++++|... ......       ..|.-.++..|+|+|| ||.|
T Consensus        93 ~~LVmE~~~G~~L~~~-~~~~~~~~~~~i~~aL~~lH~~gIiHrDL~KP~N  142 (365)
T PRK09188         93 DGLVRGWTEGVPLHLA-RPHGDPAWFRSAHRALRDLHRAGITHNDLAKPQN  142 (365)
T ss_pred             cEEEEEccCCCCHHHh-CccchHHHHHHHHHHHHHHHHCCCeeCCCCCcce
Confidence            7999999999999732 211100       1244456678999999 9988

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.03  E-value=1.6e-10  Score=120.63  Aligned_cols=114  Identities=18%  Similarity=0.192  Sum_probs=92.1

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeeccc--CchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCe-EEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSK--SSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDE-RMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~--~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~-~~lv~  579 (617)
                      ++|...+++|+|+||.++....+. +..+++|.+.-  .+....+.-.+|+.++++++|||||.....+.+.+. .+|||
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            456667899999999998777654 77899998863  344445678999999999999999999999999887 89999


Q ss_pred             eccCCCCHHHHHhcCCC-----CCcCCHH----------HHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLY-----TEHFFWS----------FFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~-----~~~l~w~----------~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.+.|...+.     +..+.|-          ++-+|.|+|||+.|
T Consensus        84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~N  136 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCAN  136 (426)
T ss_pred             eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhh
Confidence            99999999999987541     1223333          56689999999987

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.02  E-value=1e-09  Score=112.62  Aligned_cols=108  Identities=23%  Similarity=0.293  Sum_probs=87.7

Q ss_pred             ceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCCHH
Q 007129          510 NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLN  588 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~GsL~  588 (617)
                      .+||+|+||.||++.... +..||+|.+........+.+.+|+.++..++|+|++++++.+...+..++|+||+++++|.
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  105 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT  105 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence            479999999999998854 8899999986544455677999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCC------------cCCHHHHHhhhhcccccCC
Q 007129          589 DFIFGFLYTE------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       589 ~~L~~~~~~~------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      +++.......            .+..-+...|+|+||+|+|
T Consensus       106 ~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~N  146 (292)
T cd06657         106 DIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDS  146 (292)
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH
Confidence            9885432110            1122244468899999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.02  E-value=8.6e-10  Score=120.02  Aligned_cols=106  Identities=15%  Similarity=0.120  Sum_probs=87.6

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ...|...+.||+|+||.||++.... ++.||||...      ...+.+|+.++++++|+|||++++++...+..+||+|+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~  241 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK  241 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            3467778899999999999999876 7889999642      23467899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      + .++|.+++....  ..++|.                ++..|+|+||||+|
T Consensus       242 ~-~~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~N  290 (461)
T PHA03211        242 Y-RSDLYTYLGARL--RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTEN  290 (461)
T ss_pred             c-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHH
Confidence            9 479999986532  235555                34478999999987

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.02  E-value=9.6e-10  Score=111.92  Aligned_cols=121  Identities=23%  Similarity=0.342  Sum_probs=94.6

Q ss_pred             CHHHHHHhccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHcc-CCCcccceEEEEEe-
Q 007129          495 DWMAIANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQ-  571 (617)
Q Consensus       495 ~~~~l~~at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~-  571 (617)
                      ++.++..+.+.|...+.||+|+||.||++.... ++.+|+|.+... .....++..|+.++.++ +|+|++++++++.. 
T Consensus         7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   85 (282)
T cd06636           7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKK   85 (282)
T ss_pred             hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC-hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence            455556667788888899999999999999855 788999988543 33446788999999998 79999999999863 


Q ss_pred             -----CCeEEEEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          572 -----RDERMLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       572 -----~~~~~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                           ....+++|||+++|+|.+++.... ...+++.                +...|+|+||+|+|
T Consensus        86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~n  151 (282)
T cd06636          86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQN  151 (282)
T ss_pred             cccCCCCEEEEEEEeCCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH
Confidence                 456799999999999999997543 2223333                44567889999887

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.02  E-value=1.8e-09  Score=107.74  Aligned_cols=109  Identities=31%  Similarity=0.438  Sum_probs=91.2

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCch--hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG--QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~--~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      |+..+.||+|++|.||++.... ++.+++|.+.....  ...+.+.+|++++.+++|+|++++++++...+..++++||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (254)
T cd06627           2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA   81 (254)
T ss_pred             ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence            5566899999999999998764 78999999975433  45578999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++++|.+++....   .+++.                ++..|+|+||+|+|
T Consensus        82 ~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~n  129 (254)
T cd06627          82 ENGSLRQIIKKFG---PFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAAN  129 (254)
T ss_pred             CCCcHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHH
Confidence            9999999986542   34444                34577899999887

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.02  E-value=5.7e-10  Score=114.14  Aligned_cols=113  Identities=25%  Similarity=0.327  Sum_probs=89.6

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch-hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG-QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~-~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ++|...+.||+|++|.||++.... ++.||+|.+..... .....+.+|+.++.+++|+||+++++++......++|+||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            456777899999999999999864 78999999864322 2235678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++ ++|.+++......              ..|..-+...|+|+||+|+|
T Consensus        85 ~~-~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~n  133 (291)
T cd07844          85 LD-TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQN  133 (291)
T ss_pred             CC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHH
Confidence            98 5999998754321              01223355578999999986

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.02  E-value=1.8e-09  Score=110.31  Aligned_cols=112  Identities=21%  Similarity=0.294  Sum_probs=90.4

Q ss_pred             CCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          506 FSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      |...+.||+|++|.||++... .++.+++|.+........+.+.+|+.++..++|+|++++++++...+..++++||+++
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~  100 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG  100 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence            333469999999999999875 4789999998655445567789999999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++|.+++...+..            ..|..-+...|+|+||+|+|
T Consensus       101 ~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~N  145 (285)
T cd06648         101 GALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDS  145 (285)
T ss_pred             CCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhh
Confidence            9999998763211            01223345578899999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.02  E-value=1.5e-09  Score=108.64  Aligned_cols=111  Identities=16%  Similarity=0.149  Sum_probs=88.3

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEe-CCeEEEEEec
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ-RDERMLIYEY  581 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~-~~~~~lv~E~  581 (617)
                      |...+.||+|++|.||++.... ++.+|+|.+...  .....+.+.+|+.++++++|+|++++.+.+.. ....++++||
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~   81 (257)
T cd08223           2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF   81 (257)
T ss_pred             ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence            5667899999999999998765 788999998642  23445678999999999999999999987754 4467899999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +++++|.+++.... ...+++.                +...|+|+||+|+|
T Consensus        82 ~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~n  132 (257)
T cd08223          82 CEGGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQN  132 (257)
T ss_pred             cCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchh
Confidence            99999999997643 2234444                44477999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.02  E-value=1e-09  Score=112.40  Aligned_cols=123  Identities=23%  Similarity=0.307  Sum_probs=95.7

Q ss_pred             cCHHHHHHhccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHcc-CCCcccceEEEEEe
Q 007129          494 FDWMAIANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQ  571 (617)
Q Consensus       494 ~~~~~l~~at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~  571 (617)
                      +...++..++++|...+.||+|+||.||++.... ++.+|+|.+.... ...+++.+|+.++.++ +|||++++++++..
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   90 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK   90 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence            4455666778899999999999999999998854 7899999986432 2346778899999998 89999999999876


Q ss_pred             C-----CeEEEEEeccCCCCHHHHHhcCC-CCCcCCHH----------------HHHhhhhcccccCC
Q 007129          572 R-----DERMLIYEYLPNKSLNDFIFGFL-YTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       572 ~-----~~~~lv~E~~~~GsL~~~L~~~~-~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      .     ...++|+||+++|+|.+++.... ....+.|.                +...|+|+||+|+|
T Consensus        91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~n  158 (291)
T cd06639          91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNN  158 (291)
T ss_pred             ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHH
Confidence            4     35799999999999999986421 12234444                44567889999887

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.02  E-value=8.3e-10  Score=112.89  Aligned_cols=113  Identities=18%  Similarity=0.169  Sum_probs=88.9

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeC--CeEEEEEe
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR--DERMLIYE  580 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~--~~~~lv~E  580 (617)
                      +|...+.||.|++|.||++.... ++.+|+|.+.... ....+++.+|++++++++||||+++++++...  ...++|||
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e   81 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME   81 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence            46667899999999999999865 7889999987432 34457899999999999999999999988653  46799999


Q ss_pred             ccCCCCHHHHHhcCCC-CCc----------------CCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLY-TEH----------------FFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~-~~~----------------l~w~~r~~i~~~~~~~~n  617 (617)
                      |+++++|.+++..... ...                |.+-+...++|+||+|+|
T Consensus        82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~n  135 (287)
T cd06621          82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSN  135 (287)
T ss_pred             ecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH
Confidence            9999999998753211 111                333456678899999876

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.02  E-value=8.1e-10  Score=111.19  Aligned_cols=113  Identities=16%  Similarity=0.175  Sum_probs=92.0

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      +|...+.||+|+||.||++.... ++.+|+|.+.... ....+++.+|+..+++++||||+++.+.+......++++||+
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM   81 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence            45566789999999999999864 8899999987543 345578999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCC--------------CcCCHHHH-HhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYT--------------EHFFWSFF-FSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~--------------~~l~w~~r-~~i~~~~~~~~n  617 (617)
                      ++++|.+++......              ..+..-+. ..|+|+||+|+|
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~n  131 (265)
T cd06605          82 DGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSN  131 (265)
T ss_pred             CCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHH
Confidence            999999999764211              01233345 788899999876

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.02  E-value=6.5e-10  Score=111.40  Aligned_cols=110  Identities=28%  Similarity=0.418  Sum_probs=88.0

Q ss_pred             CcceecccCceeEEEEEEcC-CcEEEEeecccCchhhH--HHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          508 DKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGM--EEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       508 ~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~--~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      ..++||+|+||.||++.... ++.+|+|.+........  ....+|+..+.+++||||++++++.......++|+||+++
T Consensus         3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~   82 (260)
T PF00069_consen    3 LVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPG   82 (260)
T ss_dssp             EEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETT
T ss_pred             EeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccccc
Confidence            45789999999999999976 66899999976543332  2446699999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++|.++|..... .            ..|..-+...|+|+||+|.|
T Consensus        83 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~N  128 (260)
T PF00069_consen   83 GSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPEN  128 (260)
T ss_dssp             EBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGG
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999982211 0            11333355688899999987

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.02  E-value=6.8e-10  Score=113.11  Aligned_cols=111  Identities=25%  Similarity=0.370  Sum_probs=89.0

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      +|...+.||+|+||.||++.... ++.||||.+....  ....+.+.+|+.++.+++|||++++++++......++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            36667899999999999998864 8899999886432  22335789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++ ++|.+++.... ...+++.                ++..|+|+||+|+|
T Consensus        81 ~~-~~l~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~n  130 (284)
T cd07860          81 LH-QDLKKFMDASP-LSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN  130 (284)
T ss_pred             cc-cCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH
Confidence            95 68999987643 2234443                44567889999886

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.02  E-value=6.3e-10  Score=116.17  Aligned_cols=108  Identities=14%  Similarity=0.217  Sum_probs=86.8

Q ss_pred             ceeccc--CceeEEEEEEc-CCcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          510 NKLGEG--GFGPVYKGVLI-EGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       510 ~~lG~G--~fG~Vykg~l~-~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      ++||+|  +||+||++... .++.||+|.+...  .....+.+.+|+.++..++||||+++++++..+...++|+||+++
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            356766  89999999875 4899999998642  233457889999999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCC---------------CcCCHHHHHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLYT---------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~---------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+|.+++......               ..|+.-+...|+|+||||+|
T Consensus        84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~N  131 (328)
T cd08226          84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASH  131 (328)
T ss_pred             CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence            9999998754211               01344455578999999987

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.01  E-value=2.2e-09  Score=111.56  Aligned_cols=109  Identities=22%  Similarity=0.364  Sum_probs=87.9

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      |...+.||+|+||.||++.... +..+|+|.+....   ....+++.+|+.++++++|+|++++++++......++|+||
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence            5566789999999999998754 7899999986432   23346789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      ++ |+|.+++....  ..++|.++.                .|+|+||+|+|
T Consensus       107 ~~-g~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~N  155 (317)
T cd06635         107 CL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGN  155 (317)
T ss_pred             CC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCccc
Confidence            96 68888776432  235665443                56889999987

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.01  E-value=1.4e-09  Score=110.43  Aligned_cols=105  Identities=25%  Similarity=0.296  Sum_probs=84.8

Q ss_pred             ecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCCH
Q 007129          512 LGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSL  587 (617)
Q Consensus       512 lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~GsL  587 (617)
                      ||+|+||+||++.... ++.+|+|.+....   ....+.+..|++++..++|||++++++.+...+..++|+||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            6899999999998754 8899999986432   22345678899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          588 NDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       588 ~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      .++|..... ..+.+.                +...|+|+||+|+|
T Consensus        81 ~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~N  125 (277)
T cd05577          81 KYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPEN  125 (277)
T ss_pred             HHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH
Confidence            999976542 224443                44467899999887

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.01  E-value=7.8e-10  Score=111.91  Aligned_cols=112  Identities=28%  Similarity=0.372  Sum_probs=85.8

Q ss_pred             CCCcceecccCceeEEEEEEcC----CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCC------
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE----GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD------  573 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~----g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~------  573 (617)
                      |...+.||+|+||.||++....    ++.||||.+...  .....+++.+|+.++++++|||++++++++....      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            3445789999999999998642    578999988643  3344678999999999999999999999886532      


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCC---CCcCCH----------------HHHHhhhhcccccCC
Q 007129          574 ERMLIYEYLPNKSLNDFIFGFLY---TEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       574 ~~~lv~E~~~~GsL~~~L~~~~~---~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      ..++++||+++|+|..++.....   ...+++                .+...|+|+||+|+|
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~n  143 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARN  143 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhh
Confidence            24789999999999998864321   112333                355588999999998

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.01  E-value=1.6e-09  Score=108.87  Aligned_cols=113  Identities=19%  Similarity=0.213  Sum_probs=91.9

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch-hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG-QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~-~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      +|...+.||+|++|.||++.... ++.+++|++..... ...+++.+|+..+.+++|+|++++++++......++|+||+
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM   81 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence            56677899999999999999876 88999999875433 44678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCC-C------------CcCCHHHH-HhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLY-T------------EHFFWSFF-FSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~-~------------~~l~w~~r-~~i~~~~~~~~n  617 (617)
                      ++++|.+++..... .            ..+..-+. ..++|+||+|+|
T Consensus        82 ~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~n  130 (264)
T cd06623          82 DGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSN  130 (264)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHH
Confidence            99999999975421 0            01222244 677888888876

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.01  E-value=1.4e-09  Score=112.16  Aligned_cols=111  Identities=28%  Similarity=0.488  Sum_probs=86.6

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-Cc----EEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQ----EIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~----~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      ++|...+.||+|+||.||++.... +.    .+|+|.+.... .....+|.+|+.++..++|||+++++|++... ..++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~   85 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL   85 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence            456667799999999999998743 43    57899886543 23345799999999999999999999998754 5679


Q ss_pred             EEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++||+++|+|.+++.....  .+++.                +...|+|+||+|+|
T Consensus        86 v~e~~~~g~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~N  139 (303)
T cd05110          86 VTQLMPHGCLLDYVHEHKD--NIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARN  139 (303)
T ss_pred             eehhcCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHhhcCeeccccccce
Confidence            9999999999999976431  23333                44488999999998

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.01  E-value=3.8e-10  Score=113.22  Aligned_cols=113  Identities=18%  Similarity=0.179  Sum_probs=91.8

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      +|...+.||.|+||.||++.... ++.+|+|.+....   ....+.+.+|+.++++++|||++++++++.++...++|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            35667899999999999999864 8899999986432   2446789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+++++|.+++..... .            ..|.+-+...|+|+||+|+|
T Consensus        81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~n  130 (258)
T cd05578          81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDN  130 (258)
T ss_pred             CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHH
Confidence            9999999999975411 1            11334456678899999876

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.00  E-value=2.6e-10  Score=103.13  Aligned_cols=111  Identities=22%  Similarity=0.368  Sum_probs=85.6

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhh-HHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQG-MEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~-~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      +...++||+|.+|+|||+.-.+ ++.||+|+++-.. .++ -..-.+|+.+++.++|.|||+|+........+-||+||+
T Consensus         4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c   83 (292)
T KOG0662|consen    4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC   83 (292)
T ss_pred             hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence            3345789999999999998766 7889999986322 222 256789999999999999999999999899999999999


Q ss_pred             CCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      . .+|..|..+-...              +-|...+--++.++||||.|
T Consensus        84 d-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqn  131 (292)
T KOG0662|consen   84 D-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQN  131 (292)
T ss_pred             h-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcce
Confidence            4 4676665432110              12455566789999999987

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.00  E-value=2e-09  Score=111.18  Aligned_cols=111  Identities=23%  Similarity=0.340  Sum_probs=89.0

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ..|...++||+|+||.||++.... ++.||+|.+...   .....+++.+|+.++..++|||++++.+++......++|+
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence            346667899999999999998864 889999988632   2233467899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      ||++ |+|.+++....  ..+++..+.                .|+|+||+|+|
T Consensus        95 e~~~-g~l~~~~~~~~--~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~n  145 (307)
T cd06607          95 EYCL-GSASDILEVHK--KPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGN  145 (307)
T ss_pred             HhhC-CCHHHHHHHcc--cCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCccc
Confidence            9996 68887775432  235666443                56889999987

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.00  E-value=8.5e-11  Score=131.95  Aligned_cols=121  Identities=18%  Similarity=0.183  Sum_probs=102.5

Q ss_pred             HHHHHHhccCCCCcceecccCceeEEEEEEcC-CcEEEEeeccc---CchhhHHHHHHHHHHHHccCCCcccceEEEEEe
Q 007129          496 WMAIANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSK---SSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ  571 (617)
Q Consensus       496 ~~~l~~at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~---~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~  571 (617)
                      ..+++...++|...++||+|+||.|.....+. ++.+|.|++.+   ..+.....|+.|-.+|..-..+.||.|+-.+.+
T Consensus        67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD  146 (1317)
T KOG0612|consen   67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD  146 (1317)
T ss_pred             HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence            34555566889999999999999999999876 88999999986   345566789999999999999999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHHhcCCCCCcCCHH--------------HHHhhhhcccccCC
Q 007129          572 RDERMLIYEYLPNKSLNDFIFGFLYTEHFFWS--------------FFFSFENLSLVDRN  617 (617)
Q Consensus       572 ~~~~~lv~E~~~~GsL~~~L~~~~~~~~l~w~--------------~r~~i~~~~~~~~n  617 (617)
                      ..++|+|||||++|+|-.+|-+.. +.+=+|.              +++.-+||||||-|
T Consensus       147 ~~~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDN  205 (1317)
T KOG0612|consen  147 ERYLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDN  205 (1317)
T ss_pred             ccceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhccceeccCCcce
Confidence            999999999999999999996654 3333454              67788999999988

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.00  E-value=2.2e-09  Score=106.55  Aligned_cols=110  Identities=29%  Similarity=0.425  Sum_probs=92.2

Q ss_pred             CCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          506 FSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      |...+.||+|++|.||++... ++..+++|++........+++.+|+..+++++|+|++++++++......++++||+++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~   81 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG   81 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence            556679999999999999986 4889999999765445668899999999999999999999999999999999999999


Q ss_pred             CCHHHHHhcCCCCCcCCHHHH----------------HhhhhcccccCC
Q 007129          585 KSLNDFIFGFLYTEHFFWSFF----------------FSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~~~l~w~~r----------------~~i~~~~~~~~n  617 (617)
                      ++|.+++....  ..+++...                ..++|+||+|+|
T Consensus        82 ~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~n  128 (253)
T cd05122          82 GSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAAN  128 (253)
T ss_pred             CcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHH
Confidence            99999997652  23555543                356788888876

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.00  E-value=1.8e-09  Score=110.47  Aligned_cols=111  Identities=22%  Similarity=0.317  Sum_probs=82.4

Q ss_pred             CCCCcceecccCceeEEEEEEc--CCcEEEEeecccCc--hhhHHHHHHHHHHHHcc---CCCcccceEEEEEe-----C
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLI--EGQEIAAKRLSKSS--GQGMEEFENEVLLIAKL---QHRNLVKLIGCCTQ-----R  572 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~--~g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l---~H~nlv~l~g~~~~-----~  572 (617)
                      +|...++||+|+||.||++...  .++.||+|.++...  ......+.+|+.++..+   +||||+++++++..     .
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            4666789999999999999863  36789999886432  22234567777776665   69999999999853     3


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCCCCCcCCH----------------HHHHhhhhcccccCC
Q 007129          573 DERMLIYEYLPNKSLNDFIFGFLYTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       573 ~~~~lv~E~~~~GsL~~~L~~~~~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      ...++|+||++ ++|.+++.... ...+++                -+...|+|+||||+|
T Consensus        82 ~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~N  140 (290)
T cd07862          82 TKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQN  140 (290)
T ss_pred             CcEEEEEccCC-CCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHH
Confidence            45789999996 69999987542 122333                345678999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=98.98  E-value=1.3e-09  Score=110.06  Aligned_cols=112  Identities=20%  Similarity=0.296  Sum_probs=86.4

Q ss_pred             CCCcceecccCceeEEEEEEcC--CcEEEEeecccC----------chhhHHHHHHHHHHHHc-cCCCcccceEEEEEeC
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE--GQEIAAKRLSKS----------SGQGMEEFENEVLLIAK-LQHRNLVKLIGCCTQR  572 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~--g~~vAvK~l~~~----------~~~~~~~f~~Ev~~l~~-l~H~nlv~l~g~~~~~  572 (617)
                      |+..++||+|+||.||++....  ++.+|+|.+...          ......++..|+.++.+ ++|+|++++++++.+.
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   81 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN   81 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence            5667899999999999999865  678999987522          12234567889888875 7999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCC-CCCcCCHHH-----------------HHhhhhcccccCC
Q 007129          573 DERMLIYEYLPNKSLNDFIFGFL-YTEHFFWSF-----------------FFSFENLSLVDRN  617 (617)
Q Consensus       573 ~~~~lv~E~~~~GsL~~~L~~~~-~~~~l~w~~-----------------r~~i~~~~~~~~n  617 (617)
                      +..++++||+++++|.+++.... ....+++..                 ...|+|+||+|+|
T Consensus        82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~n  144 (269)
T cd08528          82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNN  144 (269)
T ss_pred             CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHH
Confidence            99999999999999999885421 122344442                 2347888998887

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.98  E-value=2.7e-09  Score=106.44  Aligned_cols=109  Identities=24%  Similarity=0.385  Sum_probs=90.1

Q ss_pred             CCCcceecccCceeEEEEEEc-CCcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeC--CeEEEEEe
Q 007129          506 FSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR--DERMLIYE  580 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~--~~~~lv~E  580 (617)
                      |...+.||+|++|.||++... ++..|++|.+....  ....+.+.+|+..+++++|+|++++++.+...  ...++++|
T Consensus         2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   81 (260)
T cd06606           2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE   81 (260)
T ss_pred             ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence            556679999999999999987 48899999986543  24567899999999999999999999999988  88999999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      |+++++|.+++....   .++|..                +..++|+||+|+|
T Consensus        82 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~n  131 (260)
T cd06606          82 YVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGAN  131 (260)
T ss_pred             ecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHH
Confidence            999999999997653   355554                3456778887765

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=98.98  E-value=1.6e-09  Score=109.43  Aligned_cols=116  Identities=22%  Similarity=0.311  Sum_probs=92.3

Q ss_pred             HhccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCC-----
Q 007129          501 NATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRD-----  573 (617)
Q Consensus       501 ~at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~-----  573 (617)
                      .++++|...+.||+|+||.||++.... ++.+++|.+.... ...++|.+|+.++.++ +|+|++++++++....     
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND   81 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence            356778888999999999999999864 7889999886543 3346899999999999 6999999999997654     


Q ss_pred             -eEEEEEeccCCCCHHHHHhcCC-CCCcCCHH----------------HHHhhhhcccccCC
Q 007129          574 -ERMLIYEYLPNKSLNDFIFGFL-YTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       574 -~~~lv~E~~~~GsL~~~L~~~~-~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                       ..++|+||+++++|.+++.... ....+++.                +..+|+|+||+|+|
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~n  143 (275)
T cd06608          82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQN  143 (275)
T ss_pred             eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHH
Confidence             4799999999999999987532 12234443                45577889999876

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.98  E-value=2.2e-09  Score=110.00  Aligned_cols=112  Identities=21%  Similarity=0.269  Sum_probs=87.0

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCe-----E
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDE-----R  575 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~-----~  575 (617)
                      +|+..+.||+|+||.||++.... ++.||+|.++...  ......+.+|+.++..+ +|+|++++++++...+.     .
T Consensus         2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~   81 (295)
T cd07837           2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL   81 (295)
T ss_pred             CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence            56777899999999999999864 8899999876432  22346788999999999 56999999999887665     7


Q ss_pred             EEEEeccCCCCHHHHHhcCCC--CCcCCHH----------------HHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLY--TEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~--~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++|+||+++ +|.+++.....  ...+++.                +...|+|+||+|+|
T Consensus        82 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~n  140 (295)
T cd07837          82 YLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQN  140 (295)
T ss_pred             EEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHH
Confidence            999999985 89998875432  1234444                34468899999987

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.98  E-value=1e-11  Score=117.40  Aligned_cols=114  Identities=26%  Similarity=0.378  Sum_probs=92.5

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecc--cCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLS--KSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~--~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      +.|+.-++||+|.|..||+..... |+.+|+|.+.  +.+..+.+++.+|+.+...++|||||+|+.-..+....+||+|
T Consensus        11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe   90 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD   90 (355)
T ss_pred             hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence            345555799999999999887644 8888888875  2344567889999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCC-------------CCcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLY-------------TEHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~-------------~~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|.+++|.+-|...-.             -..|+..+--.|+|+|+||.|
T Consensus        91 ~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~n  140 (355)
T KOG0033|consen   91 LVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPEN  140 (355)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhh
Confidence            9999999876543210             023677788899999999987

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=98.98  E-value=1e-09  Score=114.70  Aligned_cols=106  Identities=18%  Similarity=0.139  Sum_probs=81.5

Q ss_pred             ecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHcc---CCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          512 LGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKL---QHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       512 lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l---~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      ||+|+||.||++.... ++.||||.+....   ......+..|..++...   +||||+++...+......++||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            6999999999998765 8899999986421   12234455666666654   699999999999999999999999999


Q ss_pred             CCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+|.++|.....-             ..|..-+...|+|+||||+|
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~N  126 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPEN  126 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHH
Confidence            9999998754310             01233355678999999987

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>PHA03209 serine/threonine kinase US3; Provisional

Probab=98.97  E-value=2.5e-09  Score=113.07  Aligned_cols=108  Identities=11%  Similarity=0.092  Sum_probs=87.2

Q ss_pred             HhccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          501 NATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       501 ~at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ....+|...+.||+|+||.||++.... +..||+|.....      ....|+.++.+++|+||+++++++......++|+
T Consensus        63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  136 (357)
T PHA03209         63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL  136 (357)
T ss_pred             hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence            344678889999999999999999865 678999975432      2356899999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      ||+ .++|.+++....  ..++|..                ...|+|+||||+|
T Consensus       137 e~~-~~~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  187 (357)
T PHA03209        137 PHY-SSDLYTYLTKRS--RPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTEN  187 (357)
T ss_pred             Ecc-CCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH
Confidence            999 579999986542  2355553                3467899999987

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.97  E-value=3.4e-09  Score=106.80  Aligned_cols=111  Identities=23%  Similarity=0.400  Sum_probs=87.8

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC-----chhhHHHHHHHHHHHHccCCCcccceEEEEEeC--CeE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS-----SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR--DER  575 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~-----~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~--~~~  575 (617)
                      .+|...+.||+|+||.||++.... +..+|+|.+...     ..+..+.|.+|+.++++++|+||+++++++...  ...
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            467778899999999999998755 889999987421     223456899999999999999999999988664  457


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++++||+++++|.+++....   .+++.                +...|+|+||+|+|
T Consensus        82 ~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~n  136 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGAN  136 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHH
Confidence            89999999999999987532   12332                34467888998876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>PRK10345 hypothetical protein; Provisional

Probab=98.96  E-value=1.5e-09  Score=105.08  Aligned_cols=109  Identities=19%  Similarity=0.255  Sum_probs=82.8

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHcc-----CCCcccceEEEEEeCC---eEE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKL-----QHRNLVKLIGCCTQRD---ERM  576 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l-----~H~nlv~l~g~~~~~~---~~~  576 (617)
                      ++..+.||+|+||.||+  .+. +.. +||++........+++.+|+..+..+     .||||++++|+..+..   ..+
T Consensus         4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~   80 (210)
T PRK10345          4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY   80 (210)
T ss_pred             cCCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence            34457999999999996  433 444 68887654444567899999999999     5799999999998763   333


Q ss_pred             -EEEec--cCCCCHHHHHhcCCCC-----------CcCCHHHHHhhhhcccccCC
Q 007129          577 -LIYEY--LPNKSLNDFIFGFLYT-----------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       577 -lv~E~--~~~GsL~~~L~~~~~~-----------~~l~w~~r~~i~~~~~~~~n  617 (617)
                       +|+||  ++.|+|.++|.+....           ..+.+-+..+|+|+||||.|
T Consensus        81 ~~I~e~~G~~~~tL~~~l~~~~~~e~~~~~~~~L~~l~~yLh~~~IvhrDlKp~N  135 (210)
T PRK10345         81 DVIADFDGKPSITLTEFAEQCRYEEDVAQLRQLLKKLKRYLLDNRIVTMELKPQN  135 (210)
T ss_pred             EEEecCCCCcchhHHHHHHcccccHhHHHHHHHHHHHHHHHHHCCEeecCCCHHH
Confidence             78999  6689999999653211           11256678899999999988

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=98.96  E-value=2.6e-09  Score=107.09  Aligned_cols=112  Identities=19%  Similarity=0.244  Sum_probs=86.8

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEe--CCeEEEEEe
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ--RDERMLIYE  580 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~--~~~~~lv~E  580 (617)
                      |...+.||.|+||.||++.... ++.+|+|.+...  .....+++..|+.++++++|+|++++++++..  +...++++|
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e   81 (265)
T cd08217           2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME   81 (265)
T ss_pred             ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence            5556799999999999998754 788999988632  33445679999999999999999999998764  456789999


Q ss_pred             ccCCCCHHHHHhcCCC-CCcCCHHH---------------------HHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLY-TEHFFWSF---------------------FFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~-~~~l~w~~---------------------r~~i~~~~~~~~n  617 (617)
                      |+++++|.+++..... ...+++..                     ...|+|+||+|+|
T Consensus        82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~n  140 (265)
T cd08217          82 YCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPAN  140 (265)
T ss_pred             hccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHH
Confidence            9999999999975321 22345442                     3348888888876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=98.96  E-value=3.5e-09  Score=108.52  Aligned_cols=112  Identities=22%  Similarity=0.264  Sum_probs=88.4

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ++|...++||+|++|.||++.... ++.||+|.+....  ....+.+.+|+.++.+++|+|++++++++......++|+|
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            456777899999999999999864 8899999986432  2334678999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |++ ++|.+++..... ..+++.                +..+|+|+||+|+|
T Consensus        82 ~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~n  132 (294)
T PLN00009         82 YLD-LDLKKHMDSSPD-FAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQN  132 (294)
T ss_pred             ccc-ccHHHHHHhCCC-CCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcce
Confidence            996 588888754321 112222                34477899999987

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.96  E-value=3.9e-10  Score=118.79  Aligned_cols=113  Identities=27%  Similarity=0.384  Sum_probs=93.5

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      .|..-++||+|+-|.||.+.-.. ++.||||++........+-..+|+.+|...+|+|||+++..+...+++++|||||+
T Consensus       274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~  353 (550)
T KOG0578|consen  274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYME  353 (550)
T ss_pred             hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecC
Confidence            35556799999999999997644 88999999976544445667899999999999999999999988999999999999


Q ss_pred             CCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|+|.+.+-...-.            ..|..-+.-.|||+|||-.|
T Consensus       354 ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDn  399 (550)
T KOG0578|consen  354 GGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDN  399 (550)
T ss_pred             CCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccce
Confidence            99999988654211            23667788899999999765

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=98.95  E-value=1.5e-09  Score=109.23  Aligned_cols=121  Identities=20%  Similarity=0.287  Sum_probs=95.5

Q ss_pred             HHHHHhccCCCCcceecccCceeEEEEEEcC------CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEE
Q 007129          497 MAIANATENFSDKNKLGEGGFGPVYKGVLIE------GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCC  569 (617)
Q Consensus       497 ~~l~~at~~f~~~~~lG~G~fG~Vykg~l~~------g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~  569 (617)
                      .++......+.....+-+|.||.||.|.+.+      .+.|-||.++.. +.-...-|..|..++..+.|||+..+.|.+
T Consensus       277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~  356 (563)
T KOG1024|consen  277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS  356 (563)
T ss_pred             HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence            3444445567777789999999999997643      356788888643 444557899999999999999999999999


Q ss_pred             EeC-CeEEEEEeccCCCCHHHHHh-----cCCCCC----------------cCCHHHHHhhhhcccccCC
Q 007129          570 TQR-DERMLIYEYLPNKSLNDFIF-----GFLYTE----------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       570 ~~~-~~~~lv~E~~~~GsL~~~L~-----~~~~~~----------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++. ...+.+|.++.-|+|+.||.     +.....                .++.-++..|||-||||||
T Consensus       357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRN  426 (563)
T KOG1024|consen  357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARN  426 (563)
T ss_pred             eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhc
Confidence            885 45789999999999999998     332211                2466689999999999998

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.95  E-value=3.4e-09  Score=106.54  Aligned_cols=103  Identities=21%  Similarity=0.156  Sum_probs=85.0

Q ss_pred             ecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCCH
Q 007129          512 LGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSL  587 (617)
Q Consensus       512 lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~GsL  587 (617)
                      ||+|+||.||++.... ++.+|+|.+....   ....+.+.+|+.++..++|||++++++.+..+...++++||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            6899999999999865 8899999986432   23346799999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          588 NDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       588 ~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      .++|.+..   .+.+.                +...++|+||+|+|
T Consensus        81 ~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~n  123 (262)
T cd05572          81 WTILRDRG---LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPEN  123 (262)
T ss_pred             HHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHH
Confidence            99997643   23333                23358889998876

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.95  E-value=1.8e-09  Score=117.40  Aligned_cols=111  Identities=18%  Similarity=0.357  Sum_probs=82.8

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeC--------
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR--------  572 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~--------  572 (617)
                      ....|...++||+|+||.||++...+ ++.||||++....    ....+|+.++..++|||||++++++...        
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            34568888999999999999999865 8899999885321    2345799999999999999999876432        


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCC-CCCcC----------------CHHHHHhhhhcccccCC
Q 007129          573 DERMLIYEYLPNKSLNDFIFGFL-YTEHF----------------FWSFFFSFENLSLVDRN  617 (617)
Q Consensus       573 ~~~~lv~E~~~~GsL~~~L~~~~-~~~~l----------------~w~~r~~i~~~~~~~~n  617 (617)
                      ...++||||++ ++|.+++.... ....+                ..-+...|+|+||||+|
T Consensus       140 ~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~N  200 (440)
T PTZ00036        140 IFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQN  200 (440)
T ss_pred             eEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHH
Confidence            24668999997 57877765321 11122                33355689999999998

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=98.95  E-value=1.6e-09  Score=114.71  Aligned_cols=114  Identities=19%  Similarity=0.252  Sum_probs=87.8

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCC------
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD------  573 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~------  573 (617)
                      .++|...+.||+|+||.||++.... +..||+|.+...  .......+.+|+.++..++||||+++++++....      
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   99 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ   99 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence            4678888999999999999998754 889999998643  2334567889999999999999999999886543      


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCCC-----------CcCCHHHHHhhhhcccccCC
Q 007129          574 ERMLIYEYLPNKSLNDFIFGFLYT-----------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       574 ~~~lv~E~~~~GsL~~~L~~~~~~-----------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ..++|+||+++ +|...+...-..           ..|..-+...|+|+||||+|
T Consensus       100 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~N  153 (359)
T cd07876         100 DVYLVMELMDA-NLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN  153 (359)
T ss_pred             eeEEEEeCCCc-CHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH
Confidence            46899999964 677666432110           11344466789999999987

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=98.94  E-value=3.3e-09  Score=107.93  Aligned_cols=110  Identities=22%  Similarity=0.340  Sum_probs=88.1

Q ss_pred             CCCcceecccCceeEEEEEEc-CCcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          506 FSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      |+..++||+|++|.||++... +|..||+|++....  ....+.+.+|+.++.+++|+|++++++++...+..++++||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            345678999999999999876 48999999986432  223467889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      + ++|.+++.... ...+++..+.                +++|+||+|+|
T Consensus        81 ~-~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~n  129 (283)
T cd07835          81 D-LDLKKYMDSSP-LTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQN  129 (283)
T ss_pred             C-cCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHH
Confidence            5 79999987643 2345665444                56788888876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.93  E-value=1.5e-10  Score=122.18  Aligned_cols=108  Identities=23%  Similarity=0.369  Sum_probs=93.5

Q ss_pred             ceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCCHH
Q 007129          510 NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLN  588 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~GsL~  588 (617)
                      ..||.|+||+|||+.-++ +-..|.|.+...+....++|+-|+++++...||+||+|++.+...+.++++.|||.+|-.+
T Consensus        38 GELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVD  117 (1187)
T KOG0579|consen   38 GELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVD  117 (1187)
T ss_pred             hhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHh
Confidence            479999999999998876 5567889888777888899999999999999999999999888889999999999999998


Q ss_pred             HHHhcCCC--------------CCcCCHHHHHhhhhcccccCC
Q 007129          589 DFIFGFLY--------------TEHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       589 ~~L~~~~~--------------~~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ..+..-.+              -..|.|-+--+|||+||||-|
T Consensus       118 aimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGN  160 (1187)
T KOG0579|consen  118 AIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGN  160 (1187)
T ss_pred             HHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccc
Confidence            87664211              124889999999999999977

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.93  E-value=2e-09  Score=112.50  Aligned_cols=117  Identities=20%  Similarity=0.261  Sum_probs=91.6

Q ss_pred             HHhccCCCCcceecccCceeEEEEEEc-CCcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEe-CCeE
Q 007129          500 ANATENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ-RDER  575 (617)
Q Consensus       500 ~~at~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~-~~~~  575 (617)
                      ...+++|...+.||+|+||.||++... .+..||+|++...  .....+.+.+|+.++..++|||++++.+++.. ....
T Consensus         6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~   85 (328)
T cd07856           6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI   85 (328)
T ss_pred             eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence            446778888899999999999999876 4889999988532  22335678899999999999999999998866 5678


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCC------------cCCHHHHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYTE------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~~------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++++||+ +++|..++.......            .|..-+...|+|+||+|+|
T Consensus        86 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~N  138 (328)
T cd07856          86 YFVTELL-GTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSN  138 (328)
T ss_pred             EEEeehh-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH
Confidence            8999998 568998886533111            1233456689999999987

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.93  E-value=4.9e-09  Score=107.23  Aligned_cols=112  Identities=20%  Similarity=0.184  Sum_probs=87.1

Q ss_pred             CCCcceecccCceeEEEEEEc----CCcEEEEeecccCc----hhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLI----EGQEIAAKRLSKSS----GQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERM  576 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~----~g~~vAvK~l~~~~----~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~  576 (617)
                      |...+.||+|+||.||++...    +|..||+|+++...    ....+.+.+|+.++.++ +|+||+++++++......+
T Consensus         2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (290)
T cd05613           2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH   81 (290)
T ss_pred             ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence            556679999999999998763    57889999986432    12346788999999999 6999999999998888999


Q ss_pred             EEEeccCCCCHHHHHhcCCCCC-------------cCCHHHHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYTE-------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~~-------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|+||+++++|.++|.....-.             .|..-+...|+|+||+|+|
T Consensus        82 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~n  135 (290)
T cd05613          82 LILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLEN  135 (290)
T ss_pred             EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHH
Confidence            9999999999999997543100             0122244467799999987

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.92  E-value=2.3e-09  Score=107.51  Aligned_cols=103  Identities=19%  Similarity=0.236  Sum_probs=85.9

Q ss_pred             ecccCceeEEEEEEcC-CcEEEEeecccCch---hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCCH
Q 007129          512 LGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG---QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSL  587 (617)
Q Consensus       512 lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~---~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~GsL  587 (617)
                      ||+|+||.||++.... ++.+++|.+.....   ...+.+.+|+.++.+++|+|++++++.+......++++||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            6899999999999875 88999999864322   3456899999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          588 NDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       588 ~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      .+++.+..   .+++.                +...|+|+||+|+|
T Consensus        81 ~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~n  123 (265)
T cd05579          81 ASLLENVG---SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDN  123 (265)
T ss_pred             HHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHH
Confidence            99997643   23333                44578889998876

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>PHA03207 serine/threonine kinase US3; Provisional

Probab=98.92  E-value=3.3e-09  Score=113.68  Aligned_cols=105  Identities=11%  Similarity=0.118  Sum_probs=84.9

Q ss_pred             cCCCCcceecccCceeEEEEEEcC---CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE---GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~---g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ..|...++||+|+||.||++...+   +..||+|.+...     +.+.+|+.++.+++|||||++++++......++++|
T Consensus        92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e  166 (392)
T PHA03207         92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMP  166 (392)
T ss_pred             CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEeh
Confidence            457778899999999999997643   567999987532     345689999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++. ++|.+++....   .+.|.                +...|+|+||||+|
T Consensus       167 ~~~-~~l~~~l~~~~---~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~N  215 (392)
T PHA03207        167 KYK-CDLFTYVDRSG---PLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTEN  215 (392)
T ss_pred             hcC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHH
Confidence            995 78999984322   23333                45578999999987

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.91  E-value=3.6e-10  Score=118.84  Aligned_cols=111  Identities=24%  Similarity=0.373  Sum_probs=90.2

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      |...++||.|+||.||-+.... .+.||||++.-.   +.....+.++||..+.++.|||.+...||+......+|||||
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY  107 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY  107 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence            5666899999999999998754 678999998633   334456789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      | -||-.+.|--.++.              .-|.+-+-..+||+||||-|
T Consensus       108 C-lGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGN  156 (948)
T KOG0577|consen  108 C-LGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGN  156 (948)
T ss_pred             H-hccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccc
Confidence            9 56777776543321              12556678899999999977

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.91  E-value=3.2e-09  Score=109.85  Aligned_cols=111  Identities=21%  Similarity=0.243  Sum_probs=85.7

Q ss_pred             CCCcceecccCceeEEEEEEcC---CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeC--CeEEE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE---GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR--DERML  577 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~---g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~--~~~~l  577 (617)
                      |...++||+|+||.||++....   ++.+|+|.+....   ....+.+.+|+.++.+++|||++++++++...  ...++
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   81 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL   81 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence            4556789999999999999854   6899999987532   33346788999999999999999999999988  78999


Q ss_pred             EEeccCCCCHHHHHhcCCC--CCcCCH----------------HHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLY--TEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~--~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      |+||+++ +|.+++.....  ...+..                -+...|+|+||+|+|
T Consensus        82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~N  138 (316)
T cd07842          82 LFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPAN  138 (316)
T ss_pred             EEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHH
Confidence            9999974 77777654321  112222                244568899999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.91  E-value=3.6e-09  Score=108.76  Aligned_cols=113  Identities=25%  Similarity=0.358  Sum_probs=88.1

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCC-----
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD-----  573 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~-----  573 (617)
                      ..++|...++||+|+||.||+|.... ++.||+|.++...  ......+.+|+.++.+++|||++++++++.+..     
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~   84 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF   84 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence            45678888899999999999999865 8899999986432  223356788999999999999999999987654     


Q ss_pred             -----eEEEEEeccCCCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          574 -----ERMLIYEYLPNKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       574 -----~~~lv~E~~~~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                           ..++|+||+++ +|..++....  ..++|..                ...|+|+||+|+|
T Consensus        85 ~~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~n  146 (302)
T cd07864          85 KKDKGAFYLVFEYMDH-DLMGLLESGL--VHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSN  146 (302)
T ss_pred             cccCCcEEEEEcccCc-cHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence                 78999999975 7877776542  2344443                3367888998876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.91  E-value=3.1e-09  Score=110.29  Aligned_cols=106  Identities=20%  Similarity=0.237  Sum_probs=81.0

Q ss_pred             cceecccCceeEEEEEEcC---CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEe--CCeEEEEEeccC
Q 007129          509 KNKLGEGGFGPVYKGVLIE---GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ--RDERMLIYEYLP  583 (617)
Q Consensus       509 ~~~lG~G~fG~Vykg~l~~---g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~--~~~~~lv~E~~~  583 (617)
                      .++||+|+||.||++...+   ++.+|+|.+...  .....+.+|+.++.+++||||+++++++..  ....++++||++
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            3689999999999998753   578999998643  223567899999999999999999998854  456789999995


Q ss_pred             CCCHHHHHhcCCC------CCc----------------CCHHHHHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLY------TEH----------------FFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~------~~~----------------l~w~~r~~i~~~~~~~~n  617 (617)
                       ++|.+++.....      ...                |..-+...|+|+||||+|
T Consensus        84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~N  138 (317)
T cd07868          84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPAN  138 (317)
T ss_pred             -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHH
Confidence             588888753211      111                334456689999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.91  E-value=1.9e-09  Score=109.29  Aligned_cols=110  Identities=23%  Similarity=0.279  Sum_probs=90.2

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccC-CCcccceEEEEEeCCeEEEEE
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQ-HRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      +|...+.||+|+||.||++.... ++.+|+|.+...   .....+.+.+|+.++.+++ |+||+++++.+...+..++|+
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   81 (280)
T cd05581           2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL   81 (280)
T ss_pred             CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence            56677899999999999999864 889999988642   2233467899999999998 999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ||+++++|.+++....   .+++.                +...++|+||+|+|
T Consensus        82 e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~n  132 (280)
T cd05581          82 EYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPEN  132 (280)
T ss_pred             cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHH
Confidence            9999999999997653   34554                34466778888876

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=98.91  E-value=2.4e-09  Score=112.57  Aligned_cols=115  Identities=19%  Similarity=0.283  Sum_probs=87.9

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeC------
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR------  572 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~------  572 (617)
                      ..+.|...+.||+|+||.||++.... ++.||||.+....  ....+.+.+|+.++.+++|+||+++++++...      
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF   92 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence            34668888899999999999998754 7899999986432  23346788999999999999999999887543      


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          573 DERMLIYEYLPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       573 ~~~~lv~E~~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ...++++|++ +++|.+++......            ..|..-+...|+|+||||+|
T Consensus        93 ~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~N  148 (343)
T cd07878          93 NEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSN  148 (343)
T ss_pred             CcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhh
Confidence            3568999988 78998887543211            11333456689999999998

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.91  E-value=7.7e-09  Score=103.16  Aligned_cols=112  Identities=21%  Similarity=0.266  Sum_probs=91.4

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      |...+.||+|+||.||++.... +..+++|++....  ....+++.+|++++.+++|+|++++.+.+......++|+||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~   81 (258)
T cd08215           2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYA   81 (258)
T ss_pred             ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEec
Confidence            5566789999999999999864 8899999987542  245578999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCC-CCcCCHH----------------HHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLY-TEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~-~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++++|.+++..... ...+++.                +...++|+||+|+|
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~n  133 (258)
T cd08215          82 DGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQN  133 (258)
T ss_pred             CCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHH
Confidence            99999999976421 1234444                45577888888876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.90  E-value=6.3e-09  Score=107.93  Aligned_cols=109  Identities=22%  Similarity=0.340  Sum_probs=86.7

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      |...++||+|+||.||+|.... +..|++|.+....   ....+.+.+|+.++.+++|||++++++++.+....++|+||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            4445689999999999998754 7899999986432   23346788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      +. |+|.+++....  ..++|.+                ...|+|+||+|+|
T Consensus       103 ~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~n  151 (313)
T cd06633         103 CL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGN  151 (313)
T ss_pred             CC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhh
Confidence            95 68888876532  2355543                3467889999987

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=98.90  E-value=3.7e-09  Score=107.75  Aligned_cols=110  Identities=20%  Similarity=0.250  Sum_probs=87.9

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      +|...++||+|+||.||++.... ++.||+|.++..  .....+.+.+|++++++++|+|++++++++...+..++++||
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   81 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY   81 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence            46667899999999999999865 789999988643  233347899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++++.|..++....   .+++.                +...|+|+||+|+|
T Consensus        82 ~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~n  130 (288)
T cd07833          82 VERTLLELLEASPG---GLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPEN  130 (288)
T ss_pred             CCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH
Confidence            99877766654322   23433                34467889998876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.90  E-value=7e-09  Score=105.38  Aligned_cols=108  Identities=22%  Similarity=0.241  Sum_probs=84.1

Q ss_pred             CCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHHHHccC-CCcccceEEEEEeC--CeEEEEEec
Q 007129          507 SDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQ-HRNLVKLIGCCTQR--DERMLIYEY  581 (617)
Q Consensus       507 ~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~~--~~~~lv~E~  581 (617)
                      ...++||+|+||.||++.... ++.+|+|.++... ........+|+..+.++. |+|++++++++.+.  +..++|+||
T Consensus         2 ~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~   81 (282)
T cd07831           2 KILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFEL   81 (282)
T ss_pred             ceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEec
Confidence            445789999999999998764 8899999986432 222234567888888885 99999999999887  889999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      ++ |+|.+++....  ..++|....                .|+|+||+|+|
T Consensus        82 ~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~n  130 (282)
T cd07831          82 MD-MNLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPEN  130 (282)
T ss_pred             CC-ccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHH
Confidence            96 68998887643  246666444                57888998877

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.90  E-value=6e-09  Score=105.99  Aligned_cols=108  Identities=23%  Similarity=0.313  Sum_probs=87.0

Q ss_pred             CCcceecccCceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeC--CeEEEEEec
Q 007129          507 SDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR--DERMLIYEY  581 (617)
Q Consensus       507 ~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~--~~~~lv~E~  581 (617)
                      ...++||+|+||.||++.... ++.+|+|.+....  ....+.+.+|+.++.+++|+|++++++++...  ...++|+||
T Consensus         2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~   81 (287)
T cd07840           2 EKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEY   81 (287)
T ss_pred             eeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecc
Confidence            445789999999999999875 7899999997542  23346788999999999999999999999887  889999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      ++ ++|.+++....  ..+++..                ...++|+||+|+|
T Consensus        82 ~~-~~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~n  130 (287)
T cd07840          82 MD-HDLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSN  130 (287)
T ss_pred             cc-ccHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHH
Confidence            97 48999987642  2345543                3457788998876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=98.89  E-value=3.8e-09  Score=107.48  Aligned_cols=110  Identities=28%  Similarity=0.338  Sum_probs=87.3

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCch-hhHHHHHHHHHHHHccC-CCcccceEEEEEeCCeEEEEEecc
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG-QGMEEFENEVLLIAKLQ-HRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~-~~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      |...+.||+|+||.||+|...+ ++.|++|++..... .......+|+..+.+++ |+|++++++++......++|+||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            3456789999999999999865 78899999864322 22334567899999999 999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                       +|+|.+++.... ...++|..                ...|+|+||+|+|
T Consensus        81 -~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~n  129 (283)
T cd07830          81 -EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPEN  129 (283)
T ss_pred             -CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhh
Confidence             889999987653 22355553                3468899999887

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=98.89  E-value=2.7e-09  Score=109.30  Aligned_cols=111  Identities=23%  Similarity=0.301  Sum_probs=87.9

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch--hhHHHHHHHHHHHHccCCCcccceEEEEEeC--CeEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG--QGMEEFENEVLLIAKLQHRNLVKLIGCCTQR--DERMLI  578 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~--~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~--~~~~lv  578 (617)
                      ++|...+.||+|+||.||++.... ++.+|+|.++....  .....+.+|+.++.+++|||++++++++...  ...++|
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            456677899999999999999865 78999999864322  2234678899999999999999999998877  889999


Q ss_pred             EeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +||++ ++|.+++.....  .+++.                +...|+|+||+|+|
T Consensus        85 ~e~~~-~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~n  136 (293)
T cd07843          85 MEYVE-HDLKSLMETMKQ--PFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSN  136 (293)
T ss_pred             ehhcC-cCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHH
Confidence            99997 599998876432  34544                33467889999886

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.89  E-value=1.4e-09  Score=116.99  Aligned_cols=118  Identities=21%  Similarity=0.260  Sum_probs=94.1

Q ss_pred             HHhccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCe
Q 007129          500 ANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDE  574 (617)
Q Consensus       500 ~~at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~  574 (617)
                      ....++|...++||+|.||+|+.+.++. ++.+|||.+++.   ...+.+..+.|..++.-. +||-|++|++++...++
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~  443 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH  443 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence            3445789999999999999999999976 789999999864   456678888898887766 59999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++.||||..+|++..+.+.....            ..|+.-+.-.||-||||=-|
T Consensus       444 l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdN  498 (694)
T KOG0694|consen  444 LFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDN  498 (694)
T ss_pred             EEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhh
Confidence            99999999999955444432211            12555566689999998655

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=98.89  E-value=1.5e-09  Score=110.57  Aligned_cols=109  Identities=22%  Similarity=0.323  Sum_probs=87.1

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      |...++||+|+||.||++.... |+.+|+|.++...  ......+.+|+.++.+++|+|++++++++......++|+||+
T Consensus         2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (284)
T cd07839           2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC   81 (284)
T ss_pred             ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence            5556789999999999999864 8899999986432  222356888999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      + ++|.+++....  ..+++.                +...|+|+||+|+|
T Consensus        82 ~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~n  129 (284)
T cd07839          82 D-QDLKKYFDSCN--GDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQN  129 (284)
T ss_pred             C-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHH
Confidence            7 58888886532  123443                44578899999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.88  E-value=4.9e-09  Score=109.85  Aligned_cols=110  Identities=21%  Similarity=0.330  Sum_probs=87.1

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeC--CeEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQR--DERM  576 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~--~~~~  576 (617)
                      .++|...+.||+|+||.||+|.... +..+|+|++...  .......+.+|+.++.++ +|+||+++++++...  ...+
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   85 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY   85 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence            3556777899999999999999864 788999988532  233446788899999999 999999999988653  4679


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      +|+||++ ++|..++...    .++|..+.                .|+|+||+|+|
T Consensus        86 lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~n  137 (337)
T cd07852          86 LVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSN  137 (337)
T ss_pred             EEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH
Confidence            9999997 6999998653    35555443                57889999987

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.88  E-value=4.3e-09  Score=110.71  Aligned_cols=115  Identities=17%  Similarity=0.290  Sum_probs=88.1

Q ss_pred             hccCCCCcceecccCceeEEEEEEc-CCcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCC-----
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD-----  573 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~-----  573 (617)
                      ..+.|...+.||+|+||.||++... ++..||||++...  .....+.+.+|+.++.+++|+||+++++++....     
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF   92 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence            4567888889999999999999875 4889999998532  2233457889999999999999999999886543     


Q ss_pred             -eEEEEEeccCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          574 -ERMLIYEYLPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       574 -~~~lv~E~~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                       ..++|+||+ +++|.+++......            ..|..-++..|+|+||+|+|
T Consensus        93 ~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~N  148 (343)
T cd07880          93 HDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGN  148 (343)
T ss_pred             ceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence             358999999 77999888643211            01233355688999999987

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=98.87  E-value=8.6e-09  Score=106.79  Aligned_cols=106  Identities=22%  Similarity=0.227  Sum_probs=80.2

Q ss_pred             cceecccCceeEEEEEEcC---CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEe--CCeEEEEEeccC
Q 007129          509 KNKLGEGGFGPVYKGVLIE---GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ--RDERMLIYEYLP  583 (617)
Q Consensus       509 ~~~lG~G~fG~Vykg~l~~---g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~--~~~~~lv~E~~~  583 (617)
                      ..+||+|+||.||++...+   +..+|+|.+....  ....+.+|+.++.+++||||+++++++..  ....++|+||++
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE   83 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence            3589999999999999754   4689999886432  23568899999999999999999998854  456789999986


Q ss_pred             CCCHHHHHhcCC------CCCcCCHH----------------HHHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFL------YTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~------~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                       ++|.+++....      ....+.+.                +...|+|+||||+|
T Consensus        84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~N  138 (317)
T cd07867          84 -HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPAN  138 (317)
T ss_pred             -CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHH
Confidence             47887775321      11224443                34478999999987

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=98.87  E-value=3.3e-09  Score=112.09  Aligned_cols=115  Identities=18%  Similarity=0.232  Sum_probs=87.4

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeC------
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR------  572 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~------  572 (617)
                      ..++|...+.||+|+||.||++.... ++.||||.+...  .....+.+.+|+.++..++||||+++++++...      
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            34678888899999999999998754 789999998643  223446788999999999999999999988643      


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCCCC-----------CcCCHHHHHhhhhcccccCC
Q 007129          573 DERMLIYEYLPNKSLNDFIFGFLYT-----------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       573 ~~~~lv~E~~~~GsL~~~L~~~~~~-----------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ...++|+||+++ +|.+++...-..           ..|..-++..|+|+||||+|
T Consensus        95 ~~~~lv~e~~~~-~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~N  149 (355)
T cd07874          95 QDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN  149 (355)
T ss_pred             ceeEEEhhhhcc-cHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHH
Confidence            346899999964 677776432100           11333466689999999987

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=98.87  E-value=7.4e-09  Score=105.65  Aligned_cols=110  Identities=21%  Similarity=0.301  Sum_probs=81.3

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCch--hhHHHHHHHHHHHHcc---CCCcccceEEEEEe-----CCe
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG--QGMEEFENEVLLIAKL---QHRNLVKLIGCCTQ-----RDE  574 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~--~~~~~f~~Ev~~l~~l---~H~nlv~l~g~~~~-----~~~  574 (617)
                      |...++||+|+||.||++.... ++.||+|.++....  .....+.+|+.++..+   +||||+++++++..     ...
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~   81 (288)
T cd07863           2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK   81 (288)
T ss_pred             ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence            5566799999999999998865 88999999864321  2224566777766655   79999999998864     245


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCCCcCCH----------------HHHHhhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLYTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      .++++||++ ++|.+++..... ..+++                -+...|+|+||||+|
T Consensus        82 ~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~N  138 (288)
T cd07863          82 VTLVFEHVD-QDLRTYLDKVPP-PGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPEN  138 (288)
T ss_pred             EEEEEcccc-cCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence            789999997 589998875421 12333                355578999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=98.87  E-value=3.1e-09  Score=106.55  Aligned_cols=113  Identities=18%  Similarity=0.283  Sum_probs=91.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeeccc--CchhhHHHHHHHHHHHHccCCCcccceEEEEEe-----CCeE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSK--SSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ-----RDER  575 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~--~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~-----~~~~  575 (617)
                      ..|...+.||+|++|.|.++.... |..||||++..  ......+.-.+|+.+++.++|+||+.+......     -+..
T Consensus        22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv  101 (359)
T KOG0660|consen   22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV  101 (359)
T ss_pred             ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence            334445789999999999998865 89999999973  234455778899999999999999999988765     3568


Q ss_pred             EEEEeccCCCCHHHHHhcCC-CC------------CcCCHHHHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFL-YT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~-~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+|+|+| .-+|...|.... ..            ..|.|-+-.+|+||||||+|
T Consensus       102 YiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsN  155 (359)
T KOG0660|consen  102 YLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSN  155 (359)
T ss_pred             EEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhh
Confidence            9999999 568888887654 11            23778888899999999998

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.87  E-value=1.1e-08  Score=104.07  Aligned_cols=104  Identities=22%  Similarity=0.191  Sum_probs=78.4

Q ss_pred             eecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHH---HHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          511 KLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLL---IAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       511 ~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~---l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      .||+|+||.||++.... ++.+|+|.+....   ......+.+|..+   +...+|+|++.+.+.+...+..++|+||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            48999999999998865 8899999886432   1222334445433   334479999999999999899999999999


Q ss_pred             CCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +|+|.+++....   .+.|.                +...|+|+||+|+|
T Consensus        81 ~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~N  127 (279)
T cd05633          81 GGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPAN  127 (279)
T ss_pred             CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHH
Confidence            999999987543   24444                44568899999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.86  E-value=9.8e-09  Score=103.08  Aligned_cols=107  Identities=20%  Similarity=0.180  Sum_probs=80.8

Q ss_pred             ceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHH-HccCCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          510 NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLI-AKLQHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l-~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      +.||+|+||.||++.... ++.||+|.++...   ......+..|..++ ...+|+|++++++++...+..++|+||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            479999999999998854 8899999986432   12223455555444 455899999999999999999999999999


Q ss_pred             CCHHHHHhcCCCCCc--------------CCHHHHHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLYTEH--------------FFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~~~--------------l~w~~r~~i~~~~~~~~n  617 (617)
                      ++|.+++.... ...              |..-+...|+|+||+|+|
T Consensus        82 ~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~n  127 (260)
T cd05611          82 GDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPEN  127 (260)
T ss_pred             CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH
Confidence            99999997543 111              222344578899999886

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.86  E-value=7.4e-09  Score=103.44  Aligned_cols=112  Identities=23%  Similarity=0.267  Sum_probs=89.9

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      |...++||+|+||.||++.... ++.+++|.+...  ......++.+|+.++++++|+||+++++++......++|+||+
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (256)
T cd08530           2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYA   81 (256)
T ss_pred             ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhc
Confidence            5567899999999999998754 788999998643  2334567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCC-CCCcCCHHHH----------------HhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFL-YTEHFFWSFF----------------FSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~-~~~~l~w~~r----------------~~i~~~~~~~~n  617 (617)
                      ++++|.+++.... ....+++...                ..++|+||+|.|
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~n  133 (256)
T cd08530          82 PFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSAN  133 (256)
T ss_pred             CCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcce
Confidence            9999999987621 1234555543                356788998887

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=98.85  E-value=4.7e-09  Score=111.34  Aligned_cols=114  Identities=18%  Similarity=0.221  Sum_probs=86.7

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeC------C
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR------D  573 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~------~  573 (617)
                      .++|...++||+|+||.||++.... ++.||||++...  .....+.+.+|+.++..++||||+++++++...      .
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~  102 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  102 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence            4678888899999999999998754 788999998643  233456788999999999999999999987543      3


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCCC-----------CcCCHHHHHhhhhcccccCC
Q 007129          574 ERMLIYEYLPNKSLNDFIFGFLYT-----------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       574 ~~~lv~E~~~~GsL~~~L~~~~~~-----------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ..++||||++ ++|.+++......           ..|..-+...|+|+||||+|
T Consensus       103 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~N  156 (364)
T cd07875         103 DVYIVMELMD-ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN  156 (364)
T ss_pred             eEEEEEeCCC-CCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHH
Confidence            5799999996 4787777432110           11233355689999999987

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.85  E-value=8.7e-09  Score=107.83  Aligned_cols=108  Identities=19%  Similarity=0.221  Sum_probs=83.9

Q ss_pred             cceecccCceeEEEEEEcC-CcEEEEeecccCchhh--------------HHHHHHHHHHHHccCCCcccceEEEEEeCC
Q 007129          509 KNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQG--------------MEEFENEVLLIAKLQHRNLVKLIGCCTQRD  573 (617)
Q Consensus       509 ~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~--------------~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~  573 (617)
                      .+.||+|+||.||++.... ++.||||.+.......              ...+.+|+.++..++|+|++++++++...+
T Consensus        14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   93 (335)
T PTZ00024         14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD   93 (335)
T ss_pred             hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC
Confidence            4579999999999998764 8899999886432111              125789999999999999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          574 ERMLIYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       574 ~~~lv~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ..++|+||++ |+|.+++.....-             ..|..-+...|+|+||+|+|
T Consensus        94 ~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~n  149 (335)
T PTZ00024         94 FINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPAN  149 (335)
T ss_pred             cEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHH
Confidence            9999999996 7999998653210             01222345578999999987

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.85  E-value=6.7e-09  Score=109.31  Aligned_cols=121  Identities=20%  Similarity=0.284  Sum_probs=91.9

Q ss_pred             HHHHHHhccCCCCcceecccCceeEEEEEEc-CCcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeC
Q 007129          496 WMAIANATENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR  572 (617)
Q Consensus       496 ~~~l~~at~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~  572 (617)
                      ..++...+++|...+.||+|+||.||++... .++.||+|++...  .....+.+.+|+.++.+++|+||+++.+++...
T Consensus         9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~   88 (345)
T cd07877           9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA   88 (345)
T ss_pred             HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence            4556777889999999999999999999865 4889999998643  223346788999999999999999999988643


Q ss_pred             ------CeEEEEEeccCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          573 ------DERMLIYEYLPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       573 ------~~~~lv~E~~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                            ...++++|++ +++|.+++......            ..|..-+...|+|+||+|+|
T Consensus        89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~N  150 (345)
T cd07877          89 RSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN  150 (345)
T ss_pred             ccccccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHH
Confidence                  3367888876 78998887643211            11233355578899999987

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.85  E-value=1e-08  Score=105.96  Aligned_cols=112  Identities=24%  Similarity=0.303  Sum_probs=87.0

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch--hhHHHHHHHHHHHHccCCCcccceEEEEEeC--CeEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG--QGMEEFENEVLLIAKLQHRNLVKLIGCCTQR--DERML  577 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~--~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~--~~~~l  577 (617)
                      .++|...+.||+|+||.||++.... ++.||+|.++....  .....+.+|+.++.+++|+|++++++++...  +..++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            4567778899999999999999865 88999999863321  2234567899999999999999999998764  46799


Q ss_pred             EEeccCCCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      |+||++ ++|.+++....  ..+++..                ...|+|+||+|+|
T Consensus        86 v~e~~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~n  138 (309)
T cd07845          86 VMEYCE-QDLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSN  138 (309)
T ss_pred             EEecCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence            999996 58988886532  2345543                4467889999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.85  E-value=6.7e-09  Score=106.09  Aligned_cols=112  Identities=20%  Similarity=0.191  Sum_probs=86.9

Q ss_pred             CCCcceecccCceeEEEEEEc----CCcEEEEeecccCc----hhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLI----EGQEIAAKRLSKSS----GQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERM  576 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~----~g~~vAvK~l~~~~----~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~  576 (617)
                      |...+.||+|+||.||++...    ++..+|||.++...    ....+.+.+|+.++.++ +|+|++++++.+..+...+
T Consensus         2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~   81 (288)
T cd05583           2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH   81 (288)
T ss_pred             ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence            455678999999999998753    36789999986432    22345788999999999 6999999999998889999


Q ss_pred             EEEeccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|+||+++|+|.+++..... .            ..|...+...++|+||+|+|
T Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~n  135 (288)
T cd05583          82 LILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLEN  135 (288)
T ss_pred             EEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH
Confidence            99999999999999875421 0            01222345578899999887

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.85  E-value=4.3e-09  Score=110.29  Aligned_cols=114  Identities=15%  Similarity=0.253  Sum_probs=87.9

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeC-----CeE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR-----DER  575 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~-----~~~  575 (617)
                      .++|...++||+|+||.||++.... ++.||+|.+.... ......+.+|+.++.+++|+||+++++++...     ...
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            3568888899999999999998754 8899999986432 23446788999999999999999999887654     357


Q ss_pred             EEEEeccCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++++||++ ++|..++......            ..|..-+...|+|+||+|+|
T Consensus        84 ~lv~e~~~-~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~N  136 (336)
T cd07849          84 YIVQELME-TDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSN  136 (336)
T ss_pred             EEEehhcc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHH
Confidence            99999996 5888887543211            11333455689999999987

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>PTZ00284 protein kinase; Provisional

Probab=98.84  E-value=7.3e-09  Score=113.72  Aligned_cols=118  Identities=18%  Similarity=0.182  Sum_probs=86.0

Q ss_pred             HHHHhccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCC------CcccceEEEEE
Q 007129          498 AIANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQH------RNLVKLIGCCT  570 (617)
Q Consensus       498 ~l~~at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H------~nlv~l~g~~~  570 (617)
                      ++...+++|...++||+|+||.||++.... ++.||||+++.. ....+++..|+.++.+++|      .+++++..++.
T Consensus       123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~  201 (467)
T PTZ00284        123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV-PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ  201 (467)
T ss_pred             ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc-hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence            344456788888999999999999998765 788999998643 2233456667777766654      45888888876


Q ss_pred             eC-CeEEEEEeccCCCCHHHHHhcCCC-C------------CcCCHHHH-HhhhhcccccCC
Q 007129          571 QR-DERMLIYEYLPNKSLNDFIFGFLY-T------------EHFFWSFF-FSFENLSLVDRN  617 (617)
Q Consensus       571 ~~-~~~~lv~E~~~~GsL~~~L~~~~~-~------------~~l~w~~r-~~i~~~~~~~~n  617 (617)
                      .. .+.++|+|++ +++|.++|..... .            ..|..-+. ..|+|+||||+|
T Consensus       202 ~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~N  262 (467)
T PTZ00284        202 NETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPEN  262 (467)
T ss_pred             cCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHH
Confidence            54 5678999988 7789998875421 0            01333343 689999999998

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=98.84  E-value=8.2e-09  Score=106.87  Aligned_cols=106  Identities=13%  Similarity=0.133  Sum_probs=82.6

Q ss_pred             eecccCceeEEEEEEcCCcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCCHH
Q 007129          511 KLGEGGFGPVYKGVLIEGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLN  588 (617)
Q Consensus       511 ~lG~G~fG~Vykg~l~~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~GsL~  588 (617)
                      .+|.|+++.|+++.. .++.||||++...  .....+.+.+|+.+++.++|+||+++++++...+..++++||+++|+|.
T Consensus         9 ~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~   87 (314)
T cd08216           9 CFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCE   87 (314)
T ss_pred             hhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHH
Confidence            445556666666554 5889999998643  3455678999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCC---------------cCCHHHHHhhhhcccccCC
Q 007129          589 DFIFGFLYTE---------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       589 ~~L~~~~~~~---------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      +++.......               .|..-+...|+|+||+|+|
T Consensus        88 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~N  131 (314)
T cd08216          88 DLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASH  131 (314)
T ss_pred             HHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcce
Confidence            9997642111               1223345579999999998

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.83  E-value=5e-09  Score=105.24  Aligned_cols=112  Identities=22%  Similarity=0.235  Sum_probs=84.7

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccC-----chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS-----SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~-----~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      |...++||+|+||.||++.... +..+++|.++..     ......++..|+.++.+++|||++++++++.+....++|+
T Consensus         2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT   81 (260)
T ss_pred             ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence            4556799999999999998754 444555555421     2233456778999999999999999999999888999999


Q ss_pred             eccCCCCHHHHHhcCC-CCCcCCHHH----------------HHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFL-YTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~-~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      ||+++++|.+++.... ....+++..                ...|+|+||+|+|
T Consensus        82 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~n  136 (260)
T cd08222          82 EYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKN  136 (260)
T ss_pred             EeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhh
Confidence            9999999999987522 123455543                3467788998887

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.83  E-value=9.8e-09  Score=106.18  Aligned_cols=109  Identities=26%  Similarity=0.383  Sum_probs=86.0

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      |+..+.||+|+||.||+|.... +..+|+|.+...   .....+++.+|+.+++.++|+|++++++++......++|+||
T Consensus        17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   96 (308)
T cd06634          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY   96 (308)
T ss_pred             HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence            5555789999999999999864 788999988632   223346788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +. |+|.+++....  ..+++.                +...|+|+||+|+|
T Consensus        97 ~~-~~l~~~~~~~~--~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~n  145 (308)
T cd06634          97 CL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGN  145 (308)
T ss_pred             cC-CCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHh
Confidence            96 68888775432  123433                33467789999887

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=98.83  E-value=3.7e-09  Score=113.49  Aligned_cols=111  Identities=19%  Similarity=0.334  Sum_probs=90.6

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccC-C-----CcccceEEEEEeCCeEEE
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQ-H-----RNLVKLIGCCTQRDERML  577 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~-H-----~nlv~l~g~~~~~~~~~l  577 (617)
                      .|...+.||+|.||.|.|+.... ++.||||+++.. ..-..+-..|+.+|..|+ |     -|+|+++.++..+++.+|
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            46677899999999999998765 899999999754 333456678898988886 3     499999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCCCC---------------cCCHHHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTE---------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~---------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+|.+. -+|.+||..++.+.               .|.--+-+.|||-||||.|
T Consensus       266 VfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPEN  319 (586)
T KOG0667|consen  266 VFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPEN  319 (586)
T ss_pred             eehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhh
Confidence            999984 59999998776432               1333466799999999998

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.81  E-value=6.2e-09  Score=109.41  Aligned_cols=113  Identities=19%  Similarity=0.283  Sum_probs=88.3

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeC----------
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR----------  572 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~----------  572 (617)
                      .+|...+.||+|+||.||++.... ++.||+|.+........+.+.+|+.++.+++||||+++++++...          
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS   84 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence            457777899999999999998865 889999998755555567899999999999999999998766543          


Q ss_pred             ----CeEEEEEeccCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          573 ----DERMLIYEYLPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       573 ----~~~~lv~E~~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                          ...++|+||++ ++|.+++......            ..|..-+..+|+|+||+|+|
T Consensus        85 ~~~~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~N  144 (342)
T cd07854          85 LTELNSVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPAN  144 (342)
T ss_pred             ccccceEEEEeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH
Confidence                35789999997 5999888643211            11333355689999999987

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.81  E-value=8.1e-09  Score=105.46  Aligned_cols=111  Identities=18%  Similarity=0.278  Sum_probs=83.3

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHHHHccC-CCcccceEEEEEeCCeEEEEEec
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQ-HRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      +|...++||+|+||.||++.... ++.+|+|.+.... ......+.+|+.++.++. |+||+++++++......++++||
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            34445689999999999998765 8899999986432 334567899999999996 99999999999998899999999


Q ss_pred             cCCCCHHHH---HhcCCCCCcCCHH-----------------HHHhhhhcccccCC
Q 007129          582 LPNKSLNDF---IFGFLYTEHFFWS-----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~---L~~~~~~~~l~w~-----------------~r~~i~~~~~~~~n  617 (617)
                      ++ ++|.++   +.... ...+++.                 ....|+|+||+|+|
T Consensus        85 ~~-~~l~~l~~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~N  138 (288)
T cd06616          85 MD-ISLDKFYKYVYEVL-KSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSN  138 (288)
T ss_pred             cc-CCHHHHHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHH
Confidence            86 455543   32221 1223332                 23479999999987

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.81  E-value=1.8e-08  Score=102.47  Aligned_cols=104  Identities=23%  Similarity=0.196  Sum_probs=78.4

Q ss_pred             eecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHH---HHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          511 KLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVL---LIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       511 ~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~---~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      .||+|+||.||++.... ++.||+|.+....   ......+..|..   .+....||+++++.+++...+..++|+||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            48999999999998755 8899999986432   122223444443   3444579999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCcCCHHHH----------------HhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFFWSFF----------------FSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~w~~r----------------~~i~~~~~~~~n  617 (617)
                      +|+|.+++....   .+.|..+                ..|+|+||+|+|
T Consensus        81 g~~L~~~l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~n  127 (278)
T cd05606          81 GGDLHYHLSQHG---VFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPAN  127 (278)
T ss_pred             CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHH
Confidence            999999886532   3555543                357889999887

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=98.81  E-value=2.3e-09  Score=102.05  Aligned_cols=114  Identities=22%  Similarity=0.193  Sum_probs=90.8

Q ss_pred             cCCCCcceecccCceeEEEEEE-cCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeC-----CeEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVL-IEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR-----DERML  577 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l-~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~-----~~~~l  577 (617)
                      +.|...++||+|||..||.++- ..+..+|+|++.-...++.+..++|++..++++||||++++.++..+     .+.+|
T Consensus        21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yl  100 (302)
T KOG2345|consen   21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYL  100 (302)
T ss_pred             ceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEE
Confidence            4566678999999999999874 44889999999876677888999999999999999999998877543     45899


Q ss_pred             EEeccCCCCHHHHHhcCCCC-CcCCHHH----------------HHh--hhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYT-EHFFWSF----------------FFS--FENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~-~~l~w~~----------------r~~--i~~~~~~~~n  617 (617)
                      ++.|...|+|.+.|...+.+ ..++-.+                -..  -||+||||.|
T Consensus       101 l~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~N  159 (302)
T KOG2345|consen  101 LLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPAN  159 (302)
T ss_pred             EeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcce
Confidence            99999999999999764322 1233222                223  6899999998

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.81  E-value=2.3e-08  Score=101.09  Aligned_cols=107  Identities=18%  Similarity=0.129  Sum_probs=77.8

Q ss_pred             ccCCCCccee--cccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEE
Q 007129          503 TENFSDKNKL--GEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       503 t~~f~~~~~l--G~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      .++|...+.+  |+|+||.||++.... +..+|+|.+........     |+.....+ +|+|++++++.+...+..++|
T Consensus        13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv   87 (267)
T PHA03390         13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLI   87 (267)
T ss_pred             HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCeeEEE
Confidence            3445544454  999999999998764 78899998864321111     22222212 699999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      +||+++|+|.+++....   .++|..                ...|+|+||+|+|
T Consensus        88 ~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~n  139 (267)
T PHA03390         88 MDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLEN  139 (267)
T ss_pred             EEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHH
Confidence            99999999999997643   355553                3456789999887

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.80  E-value=4.3e-09  Score=112.63  Aligned_cols=107  Identities=21%  Similarity=0.356  Sum_probs=91.2

Q ss_pred             eecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCCHHH
Q 007129          511 KLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLND  589 (617)
Q Consensus       511 ~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~GsL~~  589 (617)
                      +||+|.+|+||-|...+ ...+|||.++....+..+-+..|+.+.+.++|.|||+.+|.+.+++...|.||-+|+|||.+
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs  661 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS  661 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence            79999999999998766 45689999987666667788999999999999999999999999999999999999999999


Q ss_pred             HHhcCC---C--C-----------CcCCHHHHHhhhhcccccCC
Q 007129          590 FIFGFL---Y--T-----------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       590 ~L~~~~---~--~-----------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|++.=   +  .           .-|..-+-.+|.|+|||--|
T Consensus       662 LLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDN  705 (1226)
T KOG4279|consen  662 LLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDN  705 (1226)
T ss_pred             HHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCc
Confidence            998641   1  1           11556677799999999766

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.80  E-value=1.8e-08  Score=100.28  Aligned_cols=103  Identities=24%  Similarity=0.267  Sum_probs=85.8

Q ss_pred             ecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCCH
Q 007129          512 LGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSL  587 (617)
Q Consensus       512 lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~GsL  587 (617)
                      ||+|+||.||++.... ++.+|+|.+....   ....+.+..|+.++++++|+|++++++.+..+...++||||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            6999999999999865 8899999986532   22456899999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          588 NDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       588 ~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      .+++....   .+++.                +...++|+||+|+|
T Consensus        81 ~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~n  123 (250)
T cd05123          81 FSHLSKEG---RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPEN  123 (250)
T ss_pred             HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcce
Confidence            99997643   24444                33467899999987

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.80  E-value=4.9e-09  Score=115.92  Aligned_cols=113  Identities=18%  Similarity=0.300  Sum_probs=83.0

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC--CcEEEEe------------------ecccCchhhHHHHHHHHHHHHccCCCcc
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE--GQEIAAK------------------RLSKSSGQGMEEFENEVLLIAKLQHRNL  562 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~--g~~vAvK------------------~l~~~~~~~~~~f~~Ev~~l~~l~H~nl  562 (617)
                      .++|...++||+|+||.||++....  +...++|                  .+. ........|.+|+.++.+++|+||
T Consensus       147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~HpnI  225 (501)
T PHA03210        147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHENI  225 (501)
T ss_pred             hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCCc
Confidence            4678888999999999999987643  1112222                  111 112234578999999999999999


Q ss_pred             cceEEEEEeCCeEEEEEeccCCCCHHHHHhcCCC---CC---------------cCCHHHHHhhhhcccccCC
Q 007129          563 VKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLY---TE---------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       563 v~l~g~~~~~~~~~lv~E~~~~GsL~~~L~~~~~---~~---------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      |++++++......++|+|++ .++|.+++.+...   ..               .|.+.+...|+|+||||+|
T Consensus       226 v~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~N  297 (501)
T PHA03210        226 LKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLEN  297 (501)
T ss_pred             CcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence            99999999999999999998 4688888765421   11               1334456689999999987

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=98.78  E-value=1e-09  Score=105.34  Aligned_cols=110  Identities=19%  Similarity=0.233  Sum_probs=84.8

Q ss_pred             CCcceecccCceeEEEEEEcC-CcEEEEeecccCch-hhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEEEeccC
Q 007129          507 SDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG-QGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       507 ~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~-~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      ....+||.|.||+|+|-..+. |+..|||+++.... ...++|+.|.++..+- ..||||+++|.+...+..++-||.|.
T Consensus        67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd  146 (361)
T KOG1006|consen   67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD  146 (361)
T ss_pred             HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh
Confidence            334589999999999998865 99999999985543 5567899999865554 78999999999999999999999994


Q ss_pred             CCCHHHHHh---cCCCC---------------CcCCH-HHHHhhhhcccccCC
Q 007129          584 NKSLNDFIF---GFLYT---------------EHFFW-SFFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~---~~~~~---------------~~l~w-~~r~~i~~~~~~~~n  617 (617)
                       -||+.+-.   +..+.               ..|+. ++.++|||||+||+|
T Consensus       147 -~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSN  198 (361)
T KOG1006|consen  147 -ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSN  198 (361)
T ss_pred             -hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhh
Confidence             46765422   11100               12444 578999999999998

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.77  E-value=2.2e-08  Score=102.80  Aligned_cols=111  Identities=14%  Similarity=0.250  Sum_probs=86.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHHHHccC-CCcccceEEEEEeCCeEEEEEe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQ-HRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ++|...+.||+|+||.||++.... ++.||||.++... .....++..|+.++.+.+ |+|++++++++......++++|
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e   94 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME   94 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence            456667899999999999999976 8899999987432 234456777887777775 9999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCCHHHH-----------------HhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFFWSFF-----------------FSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~w~~r-----------------~~i~~~~~~~~n  617 (617)
                      |++ ++|..++....  ..+++..+                 ..|+|+||+|+|
T Consensus        95 ~~~-~~l~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~n  145 (296)
T cd06618          95 LMS-TCLDKLLKRIQ--GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSN  145 (296)
T ss_pred             ccC-cCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHH
Confidence            985 47777665422  24555543                 468889999887

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.77  E-value=2.2e-08  Score=97.69  Aligned_cols=89  Identities=35%  Similarity=0.475  Sum_probs=78.4

Q ss_pred             CCcceecccCceeEEEEEEcC-CcEEEEeecccCchh-hHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          507 SDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQ-GMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       507 ~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~-~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      ...+.||+|++|.||++...+ ++.+|+|.+...... ..+.+.+|+..+.+++|+|++++++++......++++||+++
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~   81 (225)
T smart00221        2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEG   81 (225)
T ss_pred             ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCC
Confidence            445789999999999999976 889999999755443 567899999999999999999999999998999999999999


Q ss_pred             CCHHHHHhcCC
Q 007129          585 KSLNDFIFGFL  595 (617)
Q Consensus       585 GsL~~~L~~~~  595 (617)
                      ++|.+++....
T Consensus        82 ~~L~~~~~~~~   92 (225)
T smart00221       82 GDLFDYLRKKG   92 (225)
T ss_pred             CCHHHHHHhcc
Confidence            99999997643

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.77  E-value=1.5e-08  Score=102.83  Aligned_cols=108  Identities=24%  Similarity=0.317  Sum_probs=87.9

Q ss_pred             CCcceecccCceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          507 SDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       507 ~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      ...+.||+|.||.||++.... ++.+|+|.+....  ....+.+..|+.++++++|+|++++++++......++|+||++
T Consensus         2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   81 (282)
T cd07829           2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD   81 (282)
T ss_pred             eeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC
Confidence            345689999999999999876 8899999987543  2334678899999999999999999999999999999999998


Q ss_pred             CCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                       ++|.+++....  ..+++.                +...|+|+||+|+|
T Consensus        82 -~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~n  128 (282)
T cd07829          82 -MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQN  128 (282)
T ss_pred             -cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhe
Confidence             59999997652  124444                44467889998887

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.77  E-value=1.5e-08  Score=104.42  Aligned_cols=111  Identities=22%  Similarity=0.309  Sum_probs=85.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCe------
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDE------  574 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~------  574 (617)
                      ++|...++||+|+||.||++.... ++.||||.+....  ......+.+|+.++++++|||++++++++...+.      
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   91 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK   91 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence            457778899999999999998864 8899999885332  2223456789999999999999999999876543      


Q ss_pred             --EEEEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          575 --RMLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       575 --~~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                        .++|+||++ ++|.+++....  ..+++.                +...|+|+||+|+|
T Consensus        92 ~~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~n  149 (310)
T cd07865          92 GSFYLVFEFCE-HDLAGLLSNKN--VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAAN  149 (310)
T ss_pred             ceEEEEEcCCC-cCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH
Confidence              499999996 58888886542  124443                34468889999886

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.77  E-value=1.2e-08  Score=106.87  Aligned_cols=110  Identities=13%  Similarity=0.232  Sum_probs=86.9

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEe----CCeEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ----RDERM  576 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~----~~~~~  576 (617)
                      ++|...+.||+|+||.||++.... +..||+|++....  ....+.+.+|+.++..++||||+++++++..    ....+
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   84 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY   84 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence            567777899999999999998765 8899999986432  2345678889999999999999999987753    35679


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +|+||+. |+|.+++....   .+++.                +...|+|+||+|+|
T Consensus        85 lv~e~~~-~~l~~~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~N  137 (334)
T cd07855          85 VVMDLME-SDLHHIIHSDQ---PLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSN  137 (334)
T ss_pred             EEEehhh-hhHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH
Confidence            9999995 69999986543   24433                45577899999987

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.77  E-value=1.7e-08  Score=105.82  Aligned_cols=110  Identities=16%  Similarity=0.275  Sum_probs=86.0

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeC-----CeE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR-----DER  575 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~-----~~~  575 (617)
                      +.|...+.||+|+||.||++.... +..||||.+...  .......+.+|+.++..++|+|++++++++...     ...
T Consensus         5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~   84 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV   84 (337)
T ss_pred             cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence            457777899999999999998754 889999998643  233345778899999999999999999987654     357


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++|+||+. ++|.+++....   .++..                +...|+|+||+|+|
T Consensus        85 ~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~N  138 (337)
T cd07858          85 YIVYELMD-TDLHQIIRSSQ---TLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSN  138 (337)
T ss_pred             EEEEeCCC-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHH
Confidence            99999996 78998886542   23332                44478899999987

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.76  E-value=1.4e-08  Score=105.86  Aligned_cols=108  Identities=19%  Similarity=0.255  Sum_probs=87.7

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCC-----eEEE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD-----ERML  577 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~-----~~~l  577 (617)
                      |...+.||+|+||.||++.... ++.+|+|++....  ....+.+.+|+.++..++|+||+++.+++....     ..++
T Consensus         2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l   81 (330)
T cd07834           2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI   81 (330)
T ss_pred             ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence            5566799999999999999865 8899999987543  344568999999999999999999999988765     7899


Q ss_pred             EEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++||++ ++|.+++....   .+++.                +...|+|+||+|.|
T Consensus        82 v~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~n  133 (330)
T cd07834          82 VTELME-TDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSN  133 (330)
T ss_pred             Eecchh-hhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence            999998 58999886542   34444                33468899999876

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=98.76  E-value=3.1e-08  Score=104.53  Aligned_cols=114  Identities=20%  Similarity=0.246  Sum_probs=87.0

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeC------C
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR------D  573 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~------~  573 (617)
                      .+.|...+.||+|+||.||++.... ++.||+|.+...  .....+++.+|+.++..++|+|++++++++...      .
T Consensus        15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   94 (353)
T cd07850          15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ   94 (353)
T ss_pred             hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence            4668878899999999999998764 889999998642  233446788999999999999999999987643      3


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCCC-----------CcCCHHHHHhhhhcccccCC
Q 007129          574 ERMLIYEYLPNKSLNDFIFGFLYT-----------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       574 ~~~lv~E~~~~GsL~~~L~~~~~~-----------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ..++|+||+. ++|.+.+...-..           ..|..-+...|+|+||+|+|
T Consensus        95 ~~~lv~e~~~-~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~N  148 (353)
T cd07850          95 DVYLVMELMD-ANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN  148 (353)
T ss_pred             cEEEEEeccC-CCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHH
Confidence            5699999995 5888887542100           01233355678999999987

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=98.76  E-value=1.8e-08  Score=102.31  Aligned_cols=108  Identities=23%  Similarity=0.344  Sum_probs=86.9

Q ss_pred             CCcceecccCceeEEEEEEc-CCcEEEEeecccCch--hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          507 SDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSG--QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       507 ~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~--~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      ...+.||+|++|.||++... +++.+++|.+.....  .....+.+|+.++++++|+|++++++++..+...++|+||++
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   81 (283)
T cd05118           2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD   81 (283)
T ss_pred             ccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccC
Confidence            34568999999999999886 488899999864322  235678899999999999999999999999999999999997


Q ss_pred             CCCHHHHHhcCCCCCcCCHHHH----------------HhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFFWSFF----------------FSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~w~~r----------------~~i~~~~~~~~n  617 (617)
                      + +|.+++....  ..+++..+                .+|+|+||+|+|
T Consensus        82 ~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~n  128 (283)
T cd05118          82 T-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPEN  128 (283)
T ss_pred             C-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHH
Confidence            5 8988887642  23555443                367889999887

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.75  E-value=8.5e-09  Score=98.72  Aligned_cols=106  Identities=15%  Similarity=0.089  Sum_probs=71.5

Q ss_pred             ceecccCceeEEEEEEcCCcEEEEeecccCch--hh-------HHHH-----------------HHHHHHHHccCCCccc
Q 007129          510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSG--QG-------MEEF-----------------ENEVLLIAKLQHRNLV  563 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~--~~-------~~~f-----------------~~Ev~~l~~l~H~nlv  563 (617)
                      ..||+|+||.||++...+|+.||||.++....  ..       ...|                 ..|+..+.++.|+++.
T Consensus         3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~   82 (190)
T cd05147           3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP   82 (190)
T ss_pred             CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence            57999999999999988899999999964321  11       1122                 3488999999877764


Q ss_pred             ceEEEEEeCCeEEEEEeccCCCCHHHHHhcC-CCC------------CcCCHH-HHHhhhhcccccCC
Q 007129          564 KLIGCCTQRDERMLIYEYLPNKSLNDFIFGF-LYT------------EHFFWS-FFFSFENLSLVDRN  617 (617)
Q Consensus       564 ~l~g~~~~~~~~~lv~E~~~~GsL~~~L~~~-~~~------------~~l~w~-~r~~i~~~~~~~~n  617 (617)
                      ....+.  ....+|||||+++++|...+... ...            ..|.-. ++..|+|+||||+|
T Consensus        83 ~p~~~~--~~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~N  148 (190)
T cd05147          83 CPEPIL--LKSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYN  148 (190)
T ss_pred             CCcEEE--ecCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH
Confidence            433322  22348999999988776553222 111            112322 46689999999998

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.73  E-value=1.8e-08  Score=105.87  Aligned_cols=113  Identities=21%  Similarity=0.316  Sum_probs=84.8

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCC------e
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD------E  574 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~------~  574 (617)
                      +.|...+.||+|+||.||+|... .++.||+|++...  .......+.+|+.++..++|+||+++++++....      +
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   94 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD   94 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence            67777889999999999999875 4889999998642  1223456889999999999999999999886543      4


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCC-----------CcCCHHHHHhhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLYT-----------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~~-----------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      .++|+||+.. +|..++...-..           ..|...+...|+|+||+|+|
T Consensus        95 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~N  147 (342)
T cd07879          95 FYLVMPYMQT-DLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGN  147 (342)
T ss_pred             EEEEeccccc-CHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH
Confidence            6899999964 777765321100           11233355678999999987

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.72  E-value=6.3e-08  Score=98.53  Aligned_cols=110  Identities=21%  Similarity=0.343  Sum_probs=83.0

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCch--hhHHHHHHHHHHHHcc---CCCcccceEEEEEeCCe-----
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG--QGMEEFENEVLLIAKL---QHRNLVKLIGCCTQRDE-----  574 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~--~~~~~f~~Ev~~l~~l---~H~nlv~l~g~~~~~~~-----  574 (617)
                      |...++||+|+||.||++.... ++.+|+|.++....  .....+.+|+.++.++   .|+|++++++++.....     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            3456789999999999999875 88999999964321  2234567787766655   69999999999988776     


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      .++++||++ ++|.+++.... ...++|....                .|+|+||+|+|
T Consensus        81 ~~l~~e~~~-~~l~~~l~~~~-~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~n  137 (287)
T cd07838          81 LTLVFEHVD-QDLATYLSKCP-KPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQN  137 (287)
T ss_pred             eEEEehhcc-cCHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhh
Confidence            899999997 58999887543 2235555433                56788888877

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.71  E-value=2.2e-08  Score=105.20  Aligned_cols=112  Identities=21%  Similarity=0.304  Sum_probs=93.8

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecc--cCchhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEEEe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLS--KSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~--~~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ..|+..++||+||...|||+...+.+.+|+|++.  ..+.+....|++|+..|.++ +|.+||+|+.|-...+.+|||||
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE  440 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME  440 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence            3466678999999999999998888888988875  34566778999999999999 59999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCCHHHHH---------------hhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFFWSFFF---------------SFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~w~~r~---------------~i~~~~~~~~n  617 (617)
                      |- .-+|...|.... ...++|-.|+               .|+|-||||+|
T Consensus       441 ~G-d~DL~kiL~k~~-~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPAN  490 (677)
T KOG0596|consen  441 CG-DIDLNKILKKKK-SIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPAN  490 (677)
T ss_pred             cc-cccHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHHHhceeecCCCccc
Confidence            87 459999998765 4455565443               79999999998

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.69  E-value=2e-08  Score=103.61  Aligned_cols=114  Identities=24%  Similarity=0.315  Sum_probs=85.9

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch--hhHHHHHHHHHHHHccCCCcccceEEEEEeCC------
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG--QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD------  573 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~--~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~------  573 (617)
                      .++|...++||+|+||.||++.... ++.+|+|++.....  .....+.+|++++..++|+||+++++++.+..      
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            4678888899999999999999764 78999999864322  22346789999999999999999998875533      


Q ss_pred             --eEEEEEeccCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          574 --ERMLIYEYLPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       574 --~~~lv~E~~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                        ..++|+||+.. +|...+......              ..|..-+...|+|+||+|+|
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~n  145 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAAN  145 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence              46899999964 788877654321              11233355578999999886

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.69  E-value=1.7e-08  Score=112.42  Aligned_cols=116  Identities=16%  Similarity=0.179  Sum_probs=84.9

Q ss_pred             hccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCc-------hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCe
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSS-------GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDE  574 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~-------~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~  574 (617)
                      ....+...++||+|+||.||+|.+.....++.+++.+..       ....+.+.+|+.++..++|++++....++.....
T Consensus       331 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~  410 (535)
T PRK09605        331 VKRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE  410 (535)
T ss_pred             cccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence            334445678999999999999988554333222222111       1123568999999999999999998888888778


Q ss_pred             EEEEEeccCCCCHHHHHhcCCC-----CCcCCHHHHHhhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLY-----TEHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~-----~~~l~w~~r~~i~~~~~~~~n  617 (617)
                      .++||||+++++|.+++.....     ...|..-+...|+|+|+||+|
T Consensus       411 ~~lv~E~~~g~~L~~~l~~~~~~~~~i~~~L~~lH~~giiHrDlkp~N  458 (535)
T PRK09605        411 KTIVMEYIGGKDLKDVLEGNPELVRKVGEIVAKLHKAGIVHGDLTTSN  458 (535)
T ss_pred             CEEEEEecCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCChHH
Confidence            8999999999999998852110     123555677789999999998

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=98.67  E-value=1.1e-08  Score=98.59  Aligned_cols=114  Identities=19%  Similarity=0.294  Sum_probs=91.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc----h----hhHHHHHHHHHHHHcc-CCCcccceEEEEEeCC
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS----G----QGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRD  573 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~----~----~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~  573 (617)
                      +.+.+.+.||+|..+.|.+...+. |++.|+|++....    +    .-.++-++|+.+++++ .||+|+.|...+..+.
T Consensus        17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s   96 (411)
T KOG0599|consen   17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA   96 (411)
T ss_pred             hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence            456677899999999999888765 7889999986321    1    1235567899999997 7999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCC------C-------CcCCHHHHHhhhhcccccCC
Q 007129          574 ERMLIYEYLPNKSLNDFIFGFLY------T-------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       574 ~~~lv~E~~~~GsL~~~L~~~~~------~-------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ..++|+|.|+.|.|+++|.+.-.      +       ......+..+|.|+||||.|
T Consensus        97 F~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpEN  153 (411)
T KOG0599|consen   97 FVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPEN  153 (411)
T ss_pred             hhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhh
Confidence            99999999999999999986421      0       11345577899999999987

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.67  E-value=2e-08  Score=105.57  Aligned_cols=114  Identities=18%  Similarity=0.317  Sum_probs=87.6

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCe-----
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDE-----  574 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~-----  574 (617)
                      .++|...+.||+|+||.||++.... ++.||+|.+...  .....+.+.+|+.++++++|+|++++++++...+.     
T Consensus        14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07851          14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ   93 (343)
T ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence            4667778899999999999999865 789999998643  22334678889999999999999999987766554     


Q ss_pred             -EEEEEeccCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          575 -RMLIYEYLPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       575 -~~lv~E~~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                       .++|+||+ +++|.+++......            ..|..-+...|+|+||+|+|
T Consensus        94 ~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~N  148 (343)
T cd07851          94 DVYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSN  148 (343)
T ss_pred             cEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH
Confidence             89999999 67999998653211            01222345578899999986

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=98.66  E-value=6.5e-08  Score=106.77  Aligned_cols=120  Identities=22%  Similarity=0.318  Sum_probs=93.2

Q ss_pred             HHHHHHhccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHcc-CCCcccceEEEEEe--
Q 007129          496 WMAIANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQ--  571 (617)
Q Consensus       496 ~~~l~~at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~--  571 (617)
                      +..+...++.|...+++|.|.+|.||++.-.+ ++.+|||++... ....++...|..++... +|||++.++|++..  
T Consensus        11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~-~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~   89 (953)
T KOG0587|consen   11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT-EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKD   89 (953)
T ss_pred             hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC-ccccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence            34445566778888899999999999998765 889999988654 33446677778777776 79999999999875  


Q ss_pred             ---CCeEEEEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          572 ---RDERMLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       572 ---~~~~~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                         +++++||||||.+||..+++.+-. ...++|.                ++-++||+|+|--|
T Consensus        90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~N  153 (953)
T KOG0587|consen   90 PGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQN  153 (953)
T ss_pred             CCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCce
Confidence               568999999999999999987654 3345554                56678888887544

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.64  E-value=1.1e-07  Score=99.34  Aligned_cols=108  Identities=19%  Similarity=0.166  Sum_probs=82.5

Q ss_pred             CCCcceecccCceeEEEEEEcC---CcEEEEeecccCc--hhhHHHHHHHHHHHHcc-CCCcccceEEEEEeC----CeE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE---GQEIAAKRLSKSS--GQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQR----DER  575 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~---g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~----~~~  575 (617)
                      |...+.||+|+||.||++....   +..+|+|++....  ....+.+.+|+.++.++ +||||+++++++...    ...
T Consensus         2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~   81 (332)
T cd07857           2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL   81 (332)
T ss_pred             ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence            5556789999999999999753   6789999986421  22346788999999999 599999999976543    456


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++++||+. ++|.+++....   .+++.                +...|+|+||+|+|
T Consensus        82 ~~~~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~N  135 (332)
T cd07857          82 YLYEELME-ADLHQIIRSGQ---PLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGN  135 (332)
T ss_pred             EEEEeccc-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH
Confidence            88889886 68999986533   23333                55578999999987

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.62  E-value=2.5e-07  Score=88.48  Aligned_cols=104  Identities=31%  Similarity=0.425  Sum_probs=84.9

Q ss_pred             ecccCceeEEEEEEcC-CcEEEEeecccCchh-hHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCCHHH
Q 007129          512 LGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQ-GMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLND  589 (617)
Q Consensus       512 lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~-~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~GsL~~  589 (617)
                      ||+|.+|.||++.... ++.+++|.+...... ..+.+.+|+..+..++|++++++++++......++++||+++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            6899999999999865 889999998754332 35789999999999999999999999999899999999999999999


Q ss_pred             HHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          590 FIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       590 ~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++....  ..+++.                +...++|+||+|.|
T Consensus        81 ~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~n  122 (215)
T cd00180          81 LLKENE--GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPEN  122 (215)
T ss_pred             HHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhh
Confidence            997641  123333                33367788888876

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.61  E-value=4.5e-08  Score=95.45  Aligned_cols=114  Identities=11%  Similarity=-0.012  Sum_probs=86.0

Q ss_pred             ccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhH---H------HHHHHHHHHHccCCCcccceEEEEEeC-
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGM---E------EFENEVLLIAKLQHRNLVKLIGCCTQR-  572 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~---~------~f~~Ev~~l~~l~H~nlv~l~g~~~~~-  572 (617)
                      .+.|...+.+|.|+||.||.... +++.+|+|.+........   +      .|.+|+..+.+++|++|..+..+.... 
T Consensus        30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~  108 (232)
T PRK10359         30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE  108 (232)
T ss_pred             hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence            57788889999999999998654 577899999964322111   2      268999999999999999998875532 


Q ss_pred             -------CeEEEEEeccCCCCHHHHHhcCCC-----CCcCCHHHHHhhhhcccccCC
Q 007129          573 -------DERMLIYEYLPNKSLNDFIFGFLY-----TEHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       573 -------~~~~lv~E~~~~GsL~~~L~~~~~-----~~~l~w~~r~~i~~~~~~~~n  617 (617)
                             ...+|+|||+++.+|.++......     ...+.-.++..|+|+|++|.|
T Consensus       109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~~~~~~~~~i~~~l~~lH~~gi~H~Dikp~N  165 (232)
T PRK10359        109 RKTLRYAHTYIMLIEYIEGVELNDMPEISEDVKAKIKASIESLHQHGMVSGDPHKGN  165 (232)
T ss_pred             cccccccCCeEEEEEEECCccHHHhhhccHHHHHHHHHHHHHHHHcCCccCCCChHH
Confidence                   357899999999999887432110     112444578899999999998

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.61  E-value=1.4e-07  Score=90.41  Aligned_cols=106  Identities=15%  Similarity=0.129  Sum_probs=72.9

Q ss_pred             ceecccCceeEEEEEEcCCcEEEEeecccCchh---------------------h-----HHHHHHHHHHHHccCCCccc
Q 007129          510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQ---------------------G-----MEEFENEVLLIAKLQHRNLV  563 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~---------------------~-----~~~f~~Ev~~l~~l~H~nlv  563 (617)
                      ..||+|+||.||++...+|+.||||.++.....                     .     ...+..|...+.++.|+++.
T Consensus         3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~   82 (190)
T cd05145           3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVP   82 (190)
T ss_pred             ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            579999999999999878999999998753210                     0     12246788999999999876


Q ss_pred             ceEEEEEeCCeEEEEEeccCCCCHHHH-HhcCCCC------------CcCCHHHH-HhhhhcccccCC
Q 007129          564 KLIGCCTQRDERMLIYEYLPNKSLNDF-IFGFLYT------------EHFFWSFF-FSFENLSLVDRN  617 (617)
Q Consensus       564 ~l~g~~~~~~~~~lv~E~~~~GsL~~~-L~~~~~~------------~~l~w~~r-~~i~~~~~~~~n  617 (617)
                      ....+...  +.+|||||++++++... +......            ..+...+. ..|+|+||||.|
T Consensus        83 ~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~N  148 (190)
T cd05145          83 VPEPILLK--KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYN  148 (190)
T ss_pred             CceEEEec--CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhh
Confidence            55444332  34899999998865443 3322110            00122234 789999999998

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=98.60  E-value=1.5e-08  Score=99.35  Aligned_cols=113  Identities=23%  Similarity=0.384  Sum_probs=83.4

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-----CcEEEEeecccCc-hhhH-HHHHHHHHHHHccCCCcccceEEEEEe-CCeE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-----GQEIAAKRLSKSS-GQGM-EEFENEVLLIAKLQHRNLVKLIGCCTQ-RDER  575 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-----g~~vAvK~l~~~~-~~~~-~~f~~Ev~~l~~l~H~nlv~l~g~~~~-~~~~  575 (617)
                      ..|....+||+|.+|.|||+.-.+     ...+|+|+++... ..+. ..-.+|+.++++++|+||+.|.-++.+ ....
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v  103 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV  103 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence            346666789999999999997643     2368999997432 2222 467899999999999999999988877 7788


Q ss_pred             EEEEeccCCCCHHHHHhcCCC--CCcC--------CHH--------HHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLY--TEHF--------FWS--------FFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~--~~~l--------~w~--------~r~~i~~~~~~~~n  617 (617)
                      +|++||.++ +|...|+-++.  .+.+        =|.        +-==|+||||||+|
T Consensus       104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaN  162 (438)
T KOG0666|consen  104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPAN  162 (438)
T ss_pred             EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcce
Confidence            999999987 78887764432  1112        122        22247899999998

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.60  E-value=6.2e-08  Score=93.36  Aligned_cols=106  Identities=18%  Similarity=0.128  Sum_probs=80.7

Q ss_pred             eecccCceeEEEEEEcCCcEEEEeecccCch--------hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          511 KLGEGGFGPVYKGVLIEGQEIAAKRLSKSSG--------QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       511 ~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~--------~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      .||+|+||.||+|.. ++..+++|.......        ...+.+.+|+.++..++|+++.....++......++||||+
T Consensus         1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            489999999999985 577899998643211        11356789999999999888766666666777789999999


Q ss_pred             CCCCHHHHHhcCCC------CCcCCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLY------TEHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~------~~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++++|.+++.....      -..|..-++..|+|+|++|+|
T Consensus        80 ~g~~l~~~~~~~~~~~~~~i~~~l~~lH~~gi~H~Dl~~~N  120 (199)
T TIGR03724        80 EGKPLKDVIEEGNDELLREIGRLVGKLHKAGIVHGDLTTSN  120 (199)
T ss_pred             CCccHHHHHhhcHHHHHHHHHHHHHHHHHCCeecCCCCcce
Confidence            99999998865321      112445577789999999998

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.60  E-value=1.2e-07  Score=92.20  Aligned_cols=107  Identities=13%  Similarity=0.086  Sum_probs=81.6

Q ss_pred             ceecccCceeEEEEEEcCCcEEEEeecccCch--------hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSG--------QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~--------~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      +.||+|++|.||+|.. .+..+++|.......        .....+.+|+.++..++|+++.....++......+++|||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            5799999999999987 677889997643211        1124688999999999999998888887777888999999


Q ss_pred             cCCCCHHHHHhcCCC---------CCcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLY---------TEHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~---------~~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +++++|.+++.....         ...|.-.+...|+|+|++|+|
T Consensus        81 ~~G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~N  125 (211)
T PRK14879         81 IEGEPLKDLINSNGMEELELSREIGRLVGKLHSAGIIHGDLTTSN  125 (211)
T ss_pred             eCCcCHHHHHHhccHHHHHHHHHHHHHHHHHHhCCcccCCCCccc
Confidence            999999999865321         011222345578999999988

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.57  E-value=6.6e-08  Score=95.90  Aligned_cols=98  Identities=23%  Similarity=0.110  Sum_probs=76.9

Q ss_pred             cCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCCHHHHHhc
Q 007129          515 GGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFG  593 (617)
Q Consensus       515 G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~GsL~~~L~~  593 (617)
                      |.||.||++.... ++.+|+|++....     ++..|...+....|||++++++++.+....++|+||+++|+|.+++..
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            8899999998764 7899999986532     344555556667899999999999999999999999999999999865


Q ss_pred             CCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          594 FLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       594 ~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ... .            ..|.+-+...|+|+||||+|
T Consensus        79 ~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~N  115 (237)
T cd05576          79 FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNN  115 (237)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHH
Confidence            421 0            11334466689999999987

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.56  E-value=1.9e-07  Score=91.88  Aligned_cols=99  Identities=24%  Similarity=0.271  Sum_probs=81.8

Q ss_pred             CceeEEEEEEcC-CcEEEEeecccCchhh-HHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCCHHHHHhc
Q 007129          516 GFGPVYKGVLIE-GQEIAAKRLSKSSGQG-MEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFG  593 (617)
Q Consensus       516 ~fG~Vykg~l~~-g~~vAvK~l~~~~~~~-~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~GsL~~~L~~  593 (617)
                      +||.||++.... ++.+++|.+....... .+.|.+|+..+++++|+|++++++++......++++||+++++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            589999999975 8899999997654444 68999999999999999999999999999999999999999999999976


Q ss_pred             CCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          594 FLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       594 ~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ...   +++.                +...|+|+||.|+|
T Consensus        81 ~~~---~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~n  117 (244)
T smart00220       81 RGR---LSEDEARFYARQILSALEYLHSNGIIHRDLKPEN  117 (244)
T ss_pred             ccC---CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHH
Confidence            431   3333                33466778888776

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=98.54  E-value=7e-08  Score=101.89  Aligned_cols=114  Identities=23%  Similarity=0.250  Sum_probs=87.9

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch--------hhHHHHHHHHHHHHccC---CCcccceEEEEEe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG--------QGMEEFENEVLLIAKLQ---HRNLVKLIGCCTQ  571 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~--------~~~~~f~~Ev~~l~~l~---H~nlv~l~g~~~~  571 (617)
                      .+|+...+||+|+||.|+.+.++. ..+|.||.+.+...        ......-.|+.+|+.+.   |+||++++.++.+
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            346777899999999999999976 56899999864211        11123457999999997   9999999999999


Q ss_pred             CCeEEEEEecc-CCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          572 RDERMLIYEYL-PNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       572 ~~~~~lv~E~~-~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      .+..+|++|-. ++-+|++||.-+.+=             .-+..-+-+.|+|||||+.|
T Consensus       641 dd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikden  700 (772)
T KOG1152|consen  641 DDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDEN  700 (772)
T ss_pred             CCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceeccccccc
Confidence            99999999964 677899998654320             11344467799999999987

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=98.54  E-value=2.1e-08  Score=98.00  Aligned_cols=110  Identities=23%  Similarity=0.171  Sum_probs=84.5

Q ss_pred             ccCCCC-cceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHcc-CCCcccceEEEEEe----CCeE
Q 007129          503 TENFSD-KNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQ----RDER  575 (617)
Q Consensus       503 t~~f~~-~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~----~~~~  575 (617)
                      +++|+. ..+||-|--|+|.....+. ++..|+|.|...     ..-++||++.-.. .|||||+++.++..    ..-+
T Consensus        60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL  134 (400)
T KOG0604|consen   60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL  134 (400)
T ss_pred             hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence            444442 3689999999999998866 888999998532     3446777754443 79999999988754    3456


Q ss_pred             EEEEeccCCCCHHHHHhcCCCC---------------CcCCHHHHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYT---------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~---------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++|||+|++|.|+.-|.++...               ..+..-++++||||||||.|
T Consensus       135 LiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpEN  191 (400)
T KOG0604|consen  135 LIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPEN  191 (400)
T ss_pred             EeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhh
Confidence            8999999999999999876421               13567799999999999988

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.52  E-value=2.1e-08  Score=114.71  Aligned_cols=112  Identities=21%  Similarity=0.333  Sum_probs=90.4

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      .....+||.|.||.||-+.-.+ |...|||.++...  ........+|+.++..|.|||+|+.+|+-.+++..+|.||||
T Consensus      1237 Wqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC 1316 (1509)
T KOG4645|consen 1237 WQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYC 1316 (1509)
T ss_pred             eccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHh
Confidence            3456789999999999998765 8889999886432  333467889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCC--Cc-----------CCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYT--EH-----------FFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~--~~-----------l~w~~r~~i~~~~~~~~n  617 (617)
                      ++|+|.+.+...+-.  ..           +..-+.-.|.|+|+||.|
T Consensus      1317 ~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aN 1364 (1509)
T KOG4645|consen 1317 EGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPAN 1364 (1509)
T ss_pred             ccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccc
Confidence            999999999765321  11           122244489999999988

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=98.50  E-value=6.6e-08  Score=98.81  Aligned_cols=116  Identities=22%  Similarity=0.369  Sum_probs=94.7

Q ss_pred             HHhccCCCCcceecccCceeEEEEEEcC----CcEEEEeecccCchhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCe
Q 007129          500 ANATENFSDKNKLGEGGFGPVYKGVLIE----GQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDE  574 (617)
Q Consensus       500 ~~at~~f~~~~~lG~G~fG~Vykg~l~~----g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~  574 (617)
                      ....+.|...++||+|.|++||++.+..    .+.||+|.+...+  ......+|++++..+ .|.|++++.++....+.
T Consensus        32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~  109 (418)
T KOG1167|consen   32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ  109 (418)
T ss_pred             hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence            3345667888999999999999998753    5689999997543  234578999999998 58999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCC----------CcCCHHHHHhhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLYT----------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~~----------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ..+|+||+++-...+++++-...          ..|...+...|||+||||.|
T Consensus       110 v~ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsN  162 (418)
T KOG1167|consen  110 VAIVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSN  162 (418)
T ss_pred             eEEEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccCccccCCCccc
Confidence            99999999999999988764321          23555677799999999998

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.48  E-value=1.4e-07  Score=100.56  Aligned_cols=123  Identities=16%  Similarity=0.259  Sum_probs=96.1

Q ss_pred             CHHHHHHhc---cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEE
Q 007129          495 DWMAIANAT---ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIG  567 (617)
Q Consensus       495 ~~~~l~~at---~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g  567 (617)
                      .|..|+++.   ..|...+.||-|+||.|-.+.-.+ ...+|.|.|++.+   +......+.|-.+|+..+.+.||+|+-
T Consensus       617 nYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyy  696 (1034)
T KOG0608|consen  617 NYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYY  696 (1034)
T ss_pred             hHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEE
Confidence            455555553   447778899999999998876544 5678999997643   344456789999999999999999999


Q ss_pred             EEEeCCeEEEEEeccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          568 CCTQRDERMLIYEYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       568 ~~~~~~~~~lv~E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      .+.+...+|+||||+++|++-.+|....- .            ..++--+.+..||+||||-|
T Consensus       697 SFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDN  759 (1034)
T KOG0608|consen  697 SFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDN  759 (1034)
T ss_pred             EeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccc
Confidence            99999999999999999999998876431 1            12344466677899999987

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=98.48  E-value=1.2e-07  Score=105.97  Aligned_cols=112  Identities=21%  Similarity=0.293  Sum_probs=73.0

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC-----CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEE------EE
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE-----GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGC------CT  570 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~-----g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~------~~  570 (617)
                      ..++|...++||+|+||.||+|.+.+     +..||||++.....  .+.+..|.  +....+.+++.+...      +.
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e~--l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNER--VRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHHH--HHhhchhhHHHHHHhhhcccccc
Confidence            45778888999999999999999854     57899998864221  22222221  111122222221111      34


Q ss_pred             eCCeEEEEEeccCCCCHHHHHhcCCCC---------------------------------CcCCHHHHHhhhhcccccCC
Q 007129          571 QRDERMLIYEYLPNKSLNDFIFGFLYT---------------------------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       571 ~~~~~~lv~E~~~~GsL~~~L~~~~~~---------------------------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ...+.+||+||+++++|.+++......                                 ..|...+...|+|+||||+|
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~N  285 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQN  285 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHH
Confidence            567789999999999999998754210                                 01334455689999999988

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=98.46  E-value=5.9e-08  Score=99.77  Aligned_cols=115  Identities=22%  Similarity=0.225  Sum_probs=96.2

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      .+.|..-++||+|+||.|+-.+... |+-+|.|+|.+.   .+++..--++|-.++.+++.+-||.|--.+.....++||
T Consensus       184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV  263 (591)
T KOG0986|consen  184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV  263 (591)
T ss_pred             ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence            3568888999999999999998876 888999988642   234445568899999999999999999899999999999


Q ss_pred             EeccCCCCHHHHHhcCCCC---------------CcCCHHHHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYT---------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~---------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +..|.+|+|..+|......               --|...+|..|.-|||||.|
T Consensus       264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeN  317 (591)
T KOG0986|consen  264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPEN  317 (591)
T ss_pred             EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhh
Confidence            9999999999999876521               12566788999999999988

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=98.46  E-value=1e-07  Score=88.66  Aligned_cols=118  Identities=19%  Similarity=0.236  Sum_probs=88.3

Q ss_pred             HHHhccCCCCcceecccCceeEEEEEEc-CCcEEEEeecccC-chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeE
Q 007129          499 IANATENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDER  575 (617)
Q Consensus       499 l~~at~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~  575 (617)
                      +..+.+++.....||+|++|.|-+-++. +|+..|||+++.. ..+..+..++|+.+..+. ..|..|.++|........
T Consensus        41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv  120 (282)
T KOG0984|consen   41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV  120 (282)
T ss_pred             cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence            4445566666779999999999877764 4899999999743 445667888999876654 799999999998888899


Q ss_pred             EEEEeccCCCCHHHHHhc---CCCC--------------CcC-CHHHHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFG---FLYT--------------EHF-FWSFFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~---~~~~--------------~~l-~w~~r~~i~~~~~~~~n  617 (617)
                      ++-||.|. -||+.|-..   ....              ..| -.+.++++||||+||+|
T Consensus       121 wIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsN  179 (282)
T KOG0984|consen  121 WICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSN  179 (282)
T ss_pred             EEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcce
Confidence            99999995 477665331   1110              011 23589999999999998

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.45  E-value=1.1e-07  Score=101.76  Aligned_cols=110  Identities=24%  Similarity=0.322  Sum_probs=84.6

Q ss_pred             CcceecccCceeEEEEEEcC-CcEEEEeec--cc--CchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCe--EEEEEe
Q 007129          508 DKNKLGEGGFGPVYKGVLIE-GQEIAAKRL--SK--SSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDE--RMLIYE  580 (617)
Q Consensus       508 ~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l--~~--~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~--~~lv~E  580 (617)
                      ...+||+|+|-+||||.... |.+||=-.+  +.  .++...+.|..|+.+++.|+|+|||+++.++.....  .-+|.|
T Consensus        44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE  123 (632)
T KOG0584|consen   44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE  123 (632)
T ss_pred             hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence            34689999999999998754 767763222  11  244556899999999999999999999998887554  678999


Q ss_pred             ccCCCCHHHHHhcCCC---CCcCCHHHHH------------hhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLY---TEHFFWSFFF------------SFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~---~~~l~w~~r~------------~i~~~~~~~~n  617 (617)
                      .|..|+|..|+...++   +..-.|.+-.            =|||||||=-|
T Consensus       124 L~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDN  175 (632)
T KOG0584|consen  124 LFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDN  175 (632)
T ss_pred             cccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccce
Confidence            9999999999987653   2335665433            48999998655

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.43  E-value=3.9e-09  Score=100.58  Aligned_cols=109  Identities=21%  Similarity=0.370  Sum_probs=83.3

Q ss_pred             CcceecccCceeEEEEEEcC-CcEEEEeeccc-Cchhh-HHHHHHHHHHHHccCCCcccceEEEEEe--------CCeEE
Q 007129          508 DKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSK-SSGQG-MEEFENEVLLIAKLQHRNLVKLIGCCTQ--------RDERM  576 (617)
Q Consensus       508 ~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~-~~~~~-~~~f~~Ev~~l~~l~H~nlv~l~g~~~~--------~~~~~  576 (617)
                      ...++|+|.||.||++..++ |+.||+|++-- ....+ -..-.+|+.++..+.|+|++.++..|..        ....+
T Consensus        21 k~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~y  100 (376)
T KOG0669|consen   21 KLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFY  100 (376)
T ss_pred             HHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceee
Confidence            34689999999999999876 77889887632 11112 1345789999999999999999887754        23479


Q ss_pred             EEEeccCCCCHHHHHhcCCCCC--------------cCCHHHHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYTE--------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~~--------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||++++++ +|+-.|-+...+-              -|..-+|.+|+|+|+||.|
T Consensus       101 lVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaN  154 (376)
T KOG0669|consen  101 LVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAAN  154 (376)
T ss_pred             eeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhh
Confidence            99999976 8988887653321              1456689999999999988

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=98.41  E-value=2.2e-07  Score=102.18  Aligned_cols=107  Identities=27%  Similarity=0.346  Sum_probs=83.6

Q ss_pred             CCCcceecccCcee-EEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEEEeccC
Q 007129          506 FSDKNKLGEGGFGP-VYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       506 f~~~~~lG~G~fG~-Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      |...+.+|.|+-|+ ||+|.+ .|++||||++-.   ...+-..+||..+..- .||||||.++.-.++..+||..|.| 
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC-  585 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC-  585 (903)
T ss_pred             eccHHHcccCCCCcEEEEEee-CCceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence            55567889999886 799998 788999999842   2233457899988887 6999999998888888999999999 


Q ss_pred             CCCHHHHHhcCCC----CC-------------cCCHHHHHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLY----TE-------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~----~~-------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      .-+|.+++..+..    ..             -|..-+-++|+||||||-|
T Consensus       586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQN  636 (903)
T KOG1027|consen  586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQN  636 (903)
T ss_pred             hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCce
Confidence            5699999987411    11             1333466889999999988

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.40  E-value=1e-07  Score=93.99  Aligned_cols=115  Identities=20%  Similarity=0.123  Sum_probs=90.7

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      .++|...++||+|.||+|....-+. ++.+|+|+|++.   .+.....-..|-+++...+||-|..|.-.+.....++.|
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV  246 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV  246 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence            4678888899999999999988765 889999999764   233344557788999999999999999888889999999


Q ss_pred             EeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |||..+|.|+.+|...+.-             ..|+.-+-..|+-+|||-.|
T Consensus       247 MeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLEN  298 (516)
T KOG0690|consen  247 MEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLEN  298 (516)
T ss_pred             EEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhh
Confidence            9999999999888653210             13555555677777877554

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.38  E-value=6.5e-07  Score=86.31  Aligned_cols=115  Identities=17%  Similarity=0.098  Sum_probs=77.4

Q ss_pred             HHHhccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCch----------------------hhHHHHHHHHHHHHc
Q 007129          499 IANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSG----------------------QGMEEFENEVLLIAK  556 (617)
Q Consensus       499 l~~at~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~----------------------~~~~~f~~Ev~~l~~  556 (617)
                      +......+...+.||+|+||.||++..++|+.||||+++....                      .....+..|...+..
T Consensus        10 ~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   89 (198)
T cd05144          10 LVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKA   89 (198)
T ss_pred             HHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHH
Confidence            3333333566689999999999999987899999998653210                      011236778888888


Q ss_pred             cCCC--cccceEEEEEeCCeEEEEEeccCCCCHHHHHhcCCCC-------CcCCHHHHHhhhhcccccCC
Q 007129          557 LQHR--NLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYT-------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       557 l~H~--nlv~l~g~~~~~~~~~lv~E~~~~GsL~~~L~~~~~~-------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +.|+  .+.+.++    ....++||||+++++|.+.+......       ..+.-.+...|+|+||+|.|
T Consensus        90 l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~N  155 (198)
T cd05144          90 LYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVLEDPEEVLDEILEEIVKAYKHGIIHGDLSEFN  155 (198)
T ss_pred             HHHcCCCCCceee----cCCceEEEEEeCCcchhhccccccHHHHHHHHHHHHHHHHHCCCCcCCCCccc
Confidence            8877  4445443    24458999999999998765311101       01122245689999999998

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=98.38  E-value=6.6e-08  Score=91.10  Aligned_cols=112  Identities=16%  Similarity=0.352  Sum_probs=87.7

Q ss_pred             ccCCCCcceecccCceeEEEEEE-cCCcEEEEeecccCchhhHHHHHHHHHHHHccC-CCcccceEEEEEeCC--eEEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVL-IEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQ-HRNLVKLIGCCTQRD--ERMLI  578 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l-~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~~~--~~~lv  578 (617)
                      .++|...+++|+|.++.||.|.- .+.+.+.||.|++.   ..+...+|+.++.++. ||||++|+....++.  ...||
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi  113 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI  113 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence            35677778999999999999975 35778999999753   3467889999999996 999999999886643  45799


Q ss_pred             EeccCCCCHHHHHhc---CC-------CCCcCCHHHHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFG---FL-------YTEHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~---~~-------~~~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +||+.+-+....-..   ..       .-+.||..+-..|+|+|+||-|
T Consensus       114 FE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhN  162 (338)
T KOG0668|consen  114 FEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHN  162 (338)
T ss_pred             hhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcce
Confidence            999998776543211   00       0135899999999999999987

>PHA02882 putative serine/threonine kinase; Provisional

Probab=98.27  E-value=1.9e-06  Score=88.41  Aligned_cols=113  Identities=16%  Similarity=0.198  Sum_probs=72.3

Q ss_pred             cCCCCcceecccCceeEEEEEEcCC----cEEEEeecccCchhhH-----------HHHHHHHHHHHccCCCcccceEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEG----QEIAAKRLSKSSGQGM-----------EEFENEVLLIAKLQHRNLVKLIGC  568 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g----~~vAvK~l~~~~~~~~-----------~~f~~Ev~~l~~l~H~nlv~l~g~  568 (617)
                      +.|...++||+|+||.||++...+.    ..+|+|..........           .....+...+..++|+|+++++++
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~   91 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC   91 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence            4577788999999999999997553    3556665332111110           112233445567789999999998


Q ss_pred             EEeCC----eEEEEEeccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          569 CTQRD----ERMLIYEYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       569 ~~~~~----~~~lv~E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +....    ..++++|++. .++.+.+..... .            ..|..-+...|+|+||||+|
T Consensus        92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~N  156 (294)
T PHA02882         92 GSFKRCRMYYRFILLEKLV-ENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPEN  156 (294)
T ss_pred             eeEecCCceEEEEEEehhc-cCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence            76543    3467888764 356555543210 0            12445567789999999998

>cd00028 B_lectin Bulb-type mannose-specific lectin

Probab=98.21  E-value=5.1e-06  Score=72.65  Aligned_cols=85  Identities=22%  Similarity=0.367  Sum_probs=59.6

Q ss_pred             Eee-cCCceEEEecCC-CcEEEEecCCC-CCCCceEEEecCCCEEEecCCCCCCCcceEeecCCCcccccCCceeeeeee
Q 007129           86 ISS-QGNATLVLLNST-NGIVWSSNASR-TARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLV  162 (617)
Q Consensus        86 l~~-~G~~~L~l~d~~-~~~vWss~~~~-~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~PtDTlLpgq~L~~~~~  162 (617)
                      ... ||+  |++.+.. +.++|++|+.. ......+.|.++|||||++.+    +.++|+|=-.                
T Consensus        26 ~q~~dgn--lv~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~----g~~vW~S~~~----------------   83 (116)
T cd00028          26 MQSRDYN--LILYKGSSRTVVWVANRDNPSGSSCTLTLQSDGNLVIYDGS----GTVVWSSNTT----------------   83 (116)
T ss_pred             CCCCeEE--EEEEeCCCCeEEEECCCCCCCCCCEEEEEecCCCeEEEcCC----CcEEEEeccc----------------
Confidence            344 788  9998765 57999999863 234567899999999999864    6789986211                


Q ss_pred             cCceeEEEEcccCCCCCCeeeEEEeCCCCCcEEEEEcCCeeeEeeC
Q 007129          163 TGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAG  208 (617)
Q Consensus       163 tg~~~~l~Sw~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~~~g  208 (617)
                                     ...+.+.+.|+++|...++-.+ ..+.|.+.
T Consensus        84 ---------------~~~~~~~~~L~ddGnlvl~~~~-~~~~W~Sf  113 (116)
T cd00028          84 ---------------RVNGNYVLVLLDDGNLVLYDSD-GNFLWQSF  113 (116)
T ss_pred             ---------------CCCCceEEEEeCCCCEEEECCC-CCEEEcCC
Confidence                           0245678889999976654322 45567654

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.21  E-value=1.4e-06  Score=79.07  Aligned_cols=106  Identities=14%  Similarity=0.050  Sum_probs=77.8

Q ss_pred             cceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCC--CcccceEEEEEeCCeEEEEEeccCCCC
Q 007129          509 KNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQH--RNLVKLIGCCTQRDERMLIYEYLPNKS  586 (617)
Q Consensus       509 ~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H--~nlv~l~g~~~~~~~~~lv~E~~~~Gs  586 (617)
                      .+.||+|.++.||++...+ ..+++|.......  ...+.+|+..+..++|  .++.+++++....+..++++||++++.
T Consensus         3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~   79 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET   79 (155)
T ss_pred             ceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence            4689999999999999854 7899998865432  5679999999999976  588999988887788999999999887


Q ss_pred             HHHH---HhcCCCCCcCCHHHHH------hhhhcccccCC
Q 007129          587 LNDF---IFGFLYTEHFFWSFFF------SFENLSLVDRN  617 (617)
Q Consensus       587 L~~~---L~~~~~~~~l~w~~r~------~i~~~~~~~~n  617 (617)
                      +..+   ...........+-.++      .++|+|++|+|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~N  119 (155)
T cd05120          80 LDEVSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGN  119 (155)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcce
Confidence            7642   0000001112222333      48999999988

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>smart00108 B_lectin Bulb-type mannose-specific lectin

Probab=98.20  E-value=5.7e-06  Score=72.15  Aligned_cols=86  Identities=24%  Similarity=0.394  Sum_probs=59.4

Q ss_pred             EEEeecCCceEEEecCC-CcEEEEecCCCC-CCCceEEEecCCCEEEecCCCCCCCcceEeecCCCcccccCCceeeeee
Q 007129           84 LNISSQGNATLVLLNST-NGIVWSSNASRT-ARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNL  161 (617)
Q Consensus        84 l~l~~~G~~~L~l~d~~-~~~vWss~~~~~-~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~PtDTlLpgq~L~~~~  161 (617)
                      +.+..||+  ||+.+.. +.++|++++... .....+.|.++|||||++.+    +.++|+|=  + .            
T Consensus        24 ~~~q~dgn--lV~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~----g~~vW~S~--t-~------------   82 (114)
T smart00108       24 LIMQNDYN--LILYKSSSRTVVWVANRDNPVSDSCTLTLQSDGNLVLYDGD----GRVVWSSN--T-T------------   82 (114)
T ss_pred             cCCCCCEE--EEEEECCCCcEEEECCCCCCCCCCEEEEEeCCCCEEEEeCC----CCEEEEec--c-c------------
Confidence            34456888  9998765 579999998532 23367889999999999864    67899971  1 0            


Q ss_pred             ecCceeEEEEcccCCCCCCeeeEEEeCCCCCcEEEEEcCCeeeEee
Q 007129          162 VTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRA  207 (617)
Q Consensus       162 ~tg~~~~l~Sw~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~~~  207 (617)
                                      ...+.|.+.|+++|...++-. ...+.|.+
T Consensus        83 ----------------~~~~~~~~~L~ddGnlvl~~~-~~~~~W~S  111 (114)
T smart00108       83 ----------------GANGNYVLVLLDDGNLVIYDS-DGNFLWQS  111 (114)
T ss_pred             ----------------CCCCceEEEEeCCCCEEEECC-CCCEEeCC
Confidence                            124567888999998765432 23466764

>smart00090 RIO RIO-like kinase

Probab=98.19  E-value=2.9e-06  Score=84.13  Aligned_cols=109  Identities=17%  Similarity=0.073  Sum_probs=72.8

Q ss_pred             CCCCcceecccCceeEEEEE--EcCCcEEEEeecccCchh------------------------hHHHHHHHHHHHHccC
Q 007129          505 NFSDKNKLGEGGFGPVYKGV--LIEGQEIAAKRLSKSSGQ------------------------GMEEFENEVLLIAKLQ  558 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~--l~~g~~vAvK~l~~~~~~------------------------~~~~f~~Ev~~l~~l~  558 (617)
                      .|...+.||+|+||.||++.  ..+|+.||+|.++.....                        ....+..|+..+.++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            35566899999999999998  457999999998643210                        0123568999999997


Q ss_pred             CCc--ccceEEEEEeCCeEEEEEeccCCCCHHHHHhcCCCCCc-------------CCHHHHHh-hhhcccccCC
Q 007129          559 HRN--LVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEH-------------FFWSFFFS-FENLSLVDRN  617 (617)
Q Consensus       559 H~n--lv~l~g~~~~~~~~~lv~E~~~~GsL~~~L~~~~~~~~-------------l~w~~r~~-i~~~~~~~~n  617 (617)
                      |..  +.+++..    ...+|||||+++++|...+........             +.--+... |+|+|++|+|
T Consensus       109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~N  179 (237)
T smart00090      109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYN  179 (237)
T ss_pred             hcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhh
Confidence            533  3344432    235899999999888766532211100             11112335 9999999998

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.18  E-value=5.7e-07  Score=102.72  Aligned_cols=80  Identities=29%  Similarity=0.458  Sum_probs=64.0

Q ss_pred             HhccCCCCcceecccCceeEEEEEEc-CCcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          501 NATENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       501 ~at~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      +-.++|...+.||+||||.|||++-+ ||+.+|||++... +........+|+.++++|+|||||+++..+.+.....-+
T Consensus       476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~  555 (1351)
T KOG1035|consen  476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV  555 (1351)
T ss_pred             hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence            34567888899999999999999876 5999999999744 333345788999999999999999999888775544433


Q ss_pred             Ee
Q 007129          579 YE  580 (617)
Q Consensus       579 ~E  580 (617)
                      +|
T Consensus       556 ~e  557 (1351)
T KOG1035|consen  556 LE  557 (1351)
T ss_pred             cc
Confidence            33

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.18  E-value=1.6e-06  Score=82.62  Aligned_cols=111  Identities=23%  Similarity=0.306  Sum_probs=85.4

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccCC-CcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQH-RNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H-~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ..|...++||.|+||.+|.|..- +|.+||+|.-...  ....++.-|..+...++| ..+..+..+..+..+-.||||.
T Consensus        15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~--a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdL   92 (341)
T KOG1163|consen   15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK--AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDL   92 (341)
T ss_pred             cceEEEEeecCCchhheeeeeeccCCceEEEEeeccc--CCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeec
Confidence            56778899999999999999864 5999999975432  334567888888888875 5777778888888899999998


Q ss_pred             cCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      + +.||.+...=-.++              ..++.-++...||+||||.|
T Consensus        93 L-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdN  141 (341)
T KOG1163|consen   93 L-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDN  141 (341)
T ss_pred             c-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccc
Confidence            8 78888765421111              12456678889999999988

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.17  E-value=7.2e-07  Score=102.27  Aligned_cols=113  Identities=19%  Similarity=0.258  Sum_probs=77.0

Q ss_pred             hccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccC---CCcccceEEEEEeCCeEEEE
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQ---HRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~---H~nlv~l~g~~~~~~~~~lv  578 (617)
                      ..+.|...++||+|+||+||+|...+|+.||+|.-+....-   ||---..++.+|+   -+.+..+..+..-.+.-+||
T Consensus       696 ~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv  772 (974)
T KOG1166|consen  696 GGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLV  772 (974)
T ss_pred             cceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCcceee
Confidence            34567777899999999999999988999999987654322   2222222333333   12233333333445667899


Q ss_pred             EeccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      .||.+.|+|.+++...+. .            ..++.-++.+|||+||||+|
T Consensus       773 ~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDN  824 (974)
T KOG1166|consen  773 SEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDN  824 (974)
T ss_pred             eeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcce
Confidence            999999999999984431 0            11344489999999999998

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.12  E-value=1.1e-06  Score=87.10  Aligned_cols=113  Identities=18%  Similarity=0.160  Sum_probs=88.9

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~l  577 (617)
                      ..+|...++||+|++.+|..+.+.. .+.+|+|.+++.   ..+.++..+.|-.++... .||-+|.|+.++.....++.
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff  328 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF  328 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence            4678888999999999999999876 788999998753   334556677887777765 79999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCCCCcCCHHHHH---------------hhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTEHFFWSFFF---------------SFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~~l~w~~r~---------------~i~~~~~~~~n  617 (617)
                      |.||+++|+|-.++...  +++..-..||               .||-+|||-.|
T Consensus       329 vieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~rgiiyrdlkldn  381 (593)
T KOG0695|consen  329 VIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDN  381 (593)
T ss_pred             EEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccc
Confidence            99999999998888654  3344444444               56677776544

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=98.12  E-value=1.4e-06  Score=89.30  Aligned_cols=109  Identities=21%  Similarity=0.203  Sum_probs=79.8

Q ss_pred             CCCcceecccCceeEEEEEEc-CCcEEEEeecccC---ch----hhHHHHHHHHHHHHccCCCcccceEEEEEe-CCeEE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS---SG----QGMEEFENEVLLIAKLQHRNLVKLIGCCTQ-RDERM  576 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~---~~----~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~-~~~~~  576 (617)
                      |-..++||+|+|..|||+..- ..+-||||+-...   ..    .-.+.-.+|..+.+.|.||.||+++.++.- ....+
T Consensus       465 YLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFC  544 (775)
T KOG1151|consen  465 YLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFC  544 (775)
T ss_pred             HHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccce
Confidence            334578999999999999653 3677999875321   11    112346788899999999999999998865 45678


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCcCCHHHHH------------------hhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYTEHFFWSFFF------------------SFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~~~l~w~~r~------------------~i~~~~~~~~n  617 (617)
                      -|+||+++.+|+.||..++   ++.-+...                  -|||-||||.|
T Consensus       545 TVLEYceGNDLDFYLKQhk---lmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgN  600 (775)
T KOG1151|consen  545 TVLEYCEGNDLDFYLKQHK---LMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGN  600 (775)
T ss_pred             eeeeecCCCchhHHHHhhh---hhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCcc
Confidence            9999999999999997654   23333222                  36778888876

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.11  E-value=6e-06  Score=86.05  Aligned_cols=112  Identities=18%  Similarity=0.221  Sum_probs=87.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccC-----C---CcccceEEEEEe---
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQ-----H---RNLVKLIGCCTQ---  571 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~-----H---~nlv~l~g~~~~---  571 (617)
                      ..|...++||=|.|.+||.+.... .+.||+|+.+.. ..-.+.-+.||+++.+++     |   .+||+|+.++..   
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            446677899999999999998654 678999998643 334466788999998873     3   479999998865   


Q ss_pred             -CCeEEEEEeccCCCCHHHHHhcCCCCC---------------cCCH-HHHHhhhhcccccCC
Q 007129          572 -RDERMLIYEYLPNKSLNDFIFGFLYTE---------------HFFW-SFFFSFENLSLVDRN  617 (617)
Q Consensus       572 -~~~~~lv~E~~~~GsL~~~L~~~~~~~---------------~l~w-~~r~~i~~~~~~~~n  617 (617)
                       +.++++|+|++ +-+|..+|.....+.               -||. .+++.|||-||||.|
T Consensus       157 NG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPEN  218 (590)
T KOG1290|consen  157 NGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPEN  218 (590)
T ss_pred             CCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcce
Confidence             46799999999 678998888654431               2555 467899999999988

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.10  E-value=7.1e-06  Score=78.66  Aligned_cols=105  Identities=15%  Similarity=0.047  Sum_probs=75.8

Q ss_pred             CcceecccCceeEEEEEEcCCcEEEEeecccCchh----hHHHHHHHHHHHHccC-CCcccceEEEEEeCCeEEEEEecc
Q 007129          508 DKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQ----GMEEFENEVLLIAKLQ-HRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       508 ~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~----~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      ....|++|+||.||...- .+..++.+.+......    ...-|.+|++++.+++ |+++.+++++    ...+++|||+
T Consensus         6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI   80 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL   80 (218)
T ss_pred             cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence            456899999999996654 5777877777543221    1125889999999995 5889999886    4468999999


Q ss_pred             CCCCHHHHHhcCCC------CCcCCHHHHHhhhhccc-ccCC
Q 007129          583 PNKSLNDFIFGFLY------TEHFFWSFFFSFENLSL-VDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~------~~~l~w~~r~~i~~~~~-~~~n  617 (617)
                      ++.+|...+.....      ...|...++..|+|+|| ||.|
T Consensus        81 ~G~~L~~~~~~~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~N  122 (218)
T PRK12274         81 AGAAMYQRPPRGDLAYFRAARRLLQQLHRCGVAHNDLAKEAN  122 (218)
T ss_pred             cCccHHhhhhhhhHHHHHHHHHHHHHHHHCcCccCCCCCcce
Confidence            99999765422110      12355567889999999 7887

>smart00473 PAN_AP divergent subfamily of APPLE domains

Probab=98.08  E-value=6.1e-06  Score=66.27  Aligned_cols=72  Identities=35%  Similarity=0.687  Sum_probs=52.9

Q ss_pred             CceEEeecccCCCCcceeeecccchHHHHHHHhh-cccccccccccccCCCCceEecc-ccccccccccccccceeee
Q 007129          343 DGFLKRESVKLPDTRFSLVDNKISLLECKELCSK-NCSCTAYANADVRGGGSGCLLWF-HDLIDMKELSESGQDLFVR  418 (617)
Q Consensus       343 ~~f~~~~~~~~p~~~~~~~~~~~s~~~C~~~Cl~-nCsC~a~~~~~~~~~~~gC~~~~-~~l~~~~~~~~~~~~~~vr  418 (617)
                      ..|..++++.+++..... ....++++|++.|++ +|+|.||.|..   ++.+|.+|. ..+.+.......+.++|.+
T Consensus         4 ~~f~~~~~~~l~~~~~~~-~~~~s~~~C~~~C~~~~~~C~s~~y~~---~~~~C~l~~~~~~~~~~~~~~~~~~~y~~   77 (78)
T smart00473        4 DCFVRLPNTKLPGFSRIV-ISVASLEECASKCLNSNCSCRSFTYNN---GTKGCLLWSESSLGDARLFPSGGVDLYEK   77 (78)
T ss_pred             ceeEEecCccCCCCccee-EcCCCHHHHHHHhCCCCCceEEEEEcC---CCCEEEEeeCCccccceecccCCceeEEe
Confidence            468899999998655433 346799999999999 99999999864   456899999 6666665333444455543

Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=98.04  E-value=1.2e-06  Score=84.76  Aligned_cols=108  Identities=14%  Similarity=0.223  Sum_probs=80.8

Q ss_pred             cceecccCceeEEEEEEcC-CcEEEEeecccC-chhhHHHHHHHHHHHHccC-CCcccceEEEEEeCCeEEEEEeccCCC
Q 007129          509 KNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQ-HRNLVKLIGCCTQRDERMLIYEYLPNK  585 (617)
Q Consensus       509 ~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~~~~~~lv~E~~~~G  585 (617)
                      ...||.|.-|.|++..+.. |..+|||.+.+. ..+..+..+..+.++.+-+ .|.||+.+|++.......+-||.|.- 
T Consensus        97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~-  175 (391)
T KOG0983|consen   97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST-  175 (391)
T ss_pred             HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH-
Confidence            4579999999999999976 889999999764 3445567788888777765 89999999999999999999998842 


Q ss_pred             CHHHHHhcCCCC--------------CcCCH-HHHHhhhhcccccCC
Q 007129          586 SLNDFIFGFLYT--------------EHFFW-SFFFSFENLSLVDRN  617 (617)
Q Consensus       586 sL~~~L~~~~~~--------------~~l~w-~~r~~i~~~~~~~~n  617 (617)
                      -++.+|......              +.|++ +.+-.|||+|+||+|
T Consensus       176 C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSN  222 (391)
T KOG0983|consen  176 CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSN  222 (391)
T ss_pred             HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccc
Confidence            223333221110              12333 567789999999998

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.02  E-value=6.6e-07  Score=96.19  Aligned_cols=115  Identities=20%  Similarity=0.286  Sum_probs=91.3

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      .++|.....+|.|.+|.|||++... +..+|||.++-.......-.+.|+.+++.-+|||||.++|.+......++.|||
T Consensus        14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy   93 (829)
T KOG0576|consen   14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY   93 (829)
T ss_pred             ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence            4566667799999999999998765 889999999755555566778899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCC-------------CCcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLY-------------TEHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~-------------~~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +.+|+|.+.-|....             -.-|...+-..-+|||||-.|
T Consensus        94 cgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGan  142 (829)
T KOG0576|consen   94 CGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGAN  142 (829)
T ss_pred             cCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccc
Confidence            999999976442110             112455555666888888766

>cd05119 RIO RIO kinase family, catalytic domain

Probab=97.98  E-value=8.2e-06  Score=77.63  Aligned_cols=105  Identities=18%  Similarity=0.202  Sum_probs=64.9

Q ss_pred             cceecccCceeEEEEEEcCCcEEEEeecccCch--hhHHHH----------------------HHHHHHHHccCCCc--c
Q 007129          509 KNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSG--QGMEEF----------------------ENEVLLIAKLQHRN--L  562 (617)
Q Consensus       509 ~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~--~~~~~f----------------------~~Ev~~l~~l~H~n--l  562 (617)
                      .+.||+|+||.||++...+++.||||.++....  .....+                      ..|...+..+.+..  +
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            357999999999999987799999998764321  111111                      34555555554432  3


Q ss_pred             cceEEEEEeCCeEEEEEeccCCC-----CHHHHHhcCCCC-------CcCCHHHH-HhhhhcccccCC
Q 007129          563 VKLIGCCTQRDERMLIYEYLPNK-----SLNDFIFGFLYT-------EHFFWSFF-FSFENLSLVDRN  617 (617)
Q Consensus       563 v~l~g~~~~~~~~~lv~E~~~~G-----sL~~~L~~~~~~-------~~l~w~~r-~~i~~~~~~~~n  617 (617)
                      .+.+++    ...++||||++++     .|.+........       ..+...+. ..|+|+||+|.|
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~N  145 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREAGLVHGDLSEYN  145 (187)
T ss_pred             CceEec----CCCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhccCcCcCCCChhh
Confidence            444433    3458999999994     444433211000       11333445 789999999988

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.97  E-value=1.6e-06  Score=88.25  Aligned_cols=115  Identities=23%  Similarity=0.198  Sum_probs=87.1

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~l  577 (617)
                      ..+|....+||+|+||+|..+..+. .+.+|||+|++.   ...+.+.-+.|-++++-. +.|-||+|+.++..-+.++.
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF  427 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF  427 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence            3468888899999999999998765 678999999754   223445556677777665 57899999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCC-CC------------cCCHHHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLY-TE------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~-~~------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||||+.+|+|-.+|..-.+ +.            -|=.-+...||-+|||-.|
T Consensus       428 VMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDN  480 (683)
T KOG0696|consen  428 VMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDN  480 (683)
T ss_pred             EEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccc
Confidence            9999999999999875432 11            1233355578888887655

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=97.92  E-value=4.8e-06  Score=80.75  Aligned_cols=112  Identities=16%  Similarity=0.218  Sum_probs=85.8

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHcc-CCCcccceEEE-EEeCCeEEEEEec
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGC-CTQRDERMLIYEY  581 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~-~~~~~~~~lv~E~  581 (617)
                      .|...+.||+|.||.+..+..+. .+.+++|.+... ....++|.+|..---.| .|.||+.-+.. +...+....++||
T Consensus        25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~  103 (378)
T KOG1345|consen   25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF  103 (378)
T ss_pred             hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence            35556789999999999999876 678999988643 23457899998654444 68999977653 4445666789999


Q ss_pred             cCCCCHHHHHhcCCC------------CCcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLY------------TEHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~------------~~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|.|+|.+-+-...-            .+.++..+--+|.|||||+.|
T Consensus       104 aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eN  151 (378)
T KOG1345|consen  104 APRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAEN  151 (378)
T ss_pred             CccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccce
Confidence            999999987765321            135788899999999999987

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=97.91  E-value=8.9e-06  Score=82.51  Aligned_cols=113  Identities=21%  Similarity=0.222  Sum_probs=87.0

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCC--C----cccceEEEEEeCCeE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQH--R----NLVKLIGCCTQRDER  575 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H--~----nlv~l~g~~~~~~~~  575 (617)
                      ++.|....++|+|.||.|.+..... +..||||+++.. ..-.+.-+-|+.++.++.+  |    -+|.+..++.-.++.
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi  166 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI  166 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence            4667777899999999999987754 788999999754 3345667889999999832  2    356777788889999


Q ss_pred             EEEEeccCCCCHHHHHhcCCCC-CcCC--------------HHHHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYT-EHFF--------------WSFFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~-~~l~--------------w~~r~~i~~~~~~~~n  617 (617)
                      +||+|.| +-|+.+||..+... -+++              ..+-++|+|-||||.|
T Consensus       167 Civfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPEN  222 (415)
T KOG0671|consen  167 CIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPEN  222 (415)
T ss_pred             EEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChhe
Confidence            9999988 66999999875432 1222              2366789999999988

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.83  E-value=3.4e-05  Score=80.36  Aligned_cols=112  Identities=23%  Similarity=0.246  Sum_probs=82.0

Q ss_pred             CCCCcceecccCceeEEEEEEcCC--cEEEEeecccCchhhHHHHHHHHHHHHccCC----CcccceEEEE-EeCCeEEE
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIEG--QEIAAKRLSKSSGQGMEEFENEVLLIAKLQH----RNLVKLIGCC-TQRDERML  577 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~g--~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H----~nlv~l~g~~-~~~~~~~l  577 (617)
                      .|...++||+|+||.||++.-...  ..+|+|............+..|+.++..+.+    +++.+++... ......++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            677889999999999999987553  4788887754433333378888888888863    5788888777 46678899


Q ss_pred             EEeccCCCCHHHHHhcCC-CC-C-------------cCCHHHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFL-YT-E-------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~-~~-~-------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+.+ +.+|.++..... ++ .             .|.--++...+||||||.|
T Consensus        99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N  152 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPEN  152 (322)
T ss_pred             EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHH
Confidence            99977 889999774332 11 1             1233366688999999987

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=97.82  E-value=6.1e-05  Score=74.81  Aligned_cols=107  Identities=15%  Similarity=0.118  Sum_probs=76.2

Q ss_pred             ceec-ccCceeEEEEEEcCCcEEEEeecccCc-------------hhhHHHHHHHHHHHHccCCCcc--cceEEEEEeCC
Q 007129          510 NKLG-EGGFGPVYKGVLIEGQEIAAKRLSKSS-------------GQGMEEFENEVLLIAKLQHRNL--VKLIGCCTQRD  573 (617)
Q Consensus       510 ~~lG-~G~fG~Vykg~l~~g~~vAvK~l~~~~-------------~~~~~~f~~Ev~~l~~l~H~nl--v~l~g~~~~~~  573 (617)
                      ..|| .|+.|+||+.... +..++||......             ......+.+|+.++..++|+++  ++.+++.....
T Consensus        37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~  115 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH  115 (239)
T ss_pred             ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence            4788 8999999998874 6778888774311             1223567889999999998775  67777654432


Q ss_pred             e----EEEEEeccCC-CCHHHHHhcCCCC--------CcCCHHHHHhhhhcccccCC
Q 007129          574 E----RMLIYEYLPN-KSLNDFIFGFLYT--------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       574 ~----~~lv~E~~~~-GsL~~~L~~~~~~--------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      .    .++|+||+++ .+|.+++......        ..+.-.++..|+|+||+|.|
T Consensus       116 ~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~~~~~i~~~l~~lH~~GI~HrDlkp~N  172 (239)
T PRK01723        116 GLFYRADILIERIEGARDLVALLQEAPLSEEQWQAIGQLIARFHDAGVYHADLNAHN  172 (239)
T ss_pred             CcceeeeEEEEecCCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHCCCCCCCCCchh
Confidence            2    2599999997 6999888653211        11333467789999999998

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.80  E-value=2.2e-05  Score=84.95  Aligned_cols=108  Identities=19%  Similarity=0.196  Sum_probs=69.4

Q ss_pred             ceecccCceeEEEEEEcCCcEEEEeecccCchhhH------------------------------H----------HHHH
Q 007129          510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGM------------------------------E----------EFEN  549 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~------------------------------~----------~f~~  549 (617)
                      +.||.|++|.||+|.+.+|+.||||..+.......                              +          +|.+
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~  202 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR  202 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence            57999999999999999999999999865321110                              0          2455


Q ss_pred             HHHHHHcc----CCCcccceEEEE-EeCCeEEEEEeccCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcc
Q 007129          550 EVLLIAKL----QHRNLVKLIGCC-TQRDERMLIYEYLPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLS  612 (617)
Q Consensus       550 Ev~~l~~l----~H~nlv~l~g~~-~~~~~~~lv~E~~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~  612 (617)
                      |+..+.++    +|.+-+.+-..+ ......+|||||+++++|.+++......            ..+.-..+..++|+|
T Consensus       203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~g~~H~D  282 (437)
T TIGR01982       203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRDGFFHAD  282 (437)
T ss_pred             HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCceeCC
Confidence            66555554    232223322222 2245578999999999998876432100            011223455789999


Q ss_pred             cccCC
Q 007129          613 LVDRN  617 (617)
Q Consensus       613 ~~~~n  617 (617)
                      ++|.|
T Consensus       283 ~hPgN  287 (437)
T TIGR01982       283 LHPGN  287 (437)
T ss_pred             CCccc
Confidence            99988

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=97.80  E-value=3.8e-06  Score=81.25  Aligned_cols=99  Identities=23%  Similarity=0.375  Sum_probs=77.9

Q ss_pred             ceecccCceeEEEEEEcCCcEEEEeeccc--CchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCCH
Q 007129          510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSK--SSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSL  587 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~g~~vAvK~l~~--~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~GsL  587 (617)
                      .+|.+...|..|+|.+. |..+.+|.+..  .+....++|..|.-.++-+.||||+.++|.|..+..+.++..|||.|||
T Consensus       196 tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsl  274 (448)
T KOG0195|consen  196 TKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSL  274 (448)
T ss_pred             hhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHH
Confidence            47888888999999994 45566677653  2333446899999889889999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcCCHHHHHhhhh
Q 007129          588 NDFIFGFLYTEHFFWSFFFSFEN  610 (617)
Q Consensus       588 ~~~L~~~~~~~~l~w~~r~~i~~  610 (617)
                      ...|+... ...+|-.+..+.|+
T Consensus       275 ynvlhe~t-~vvvd~sqav~fal  296 (448)
T KOG0195|consen  275 YNVLHEQT-SVVVDHSQAVRFAL  296 (448)
T ss_pred             HHHHhcCc-cEEEecchHHHHHH
Confidence            99999865 44556555544443

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=97.72  E-value=1.3e-05  Score=86.42  Aligned_cols=111  Identities=25%  Similarity=0.219  Sum_probs=85.3

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEEEe
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ++.+.....+|.|+|+.|-.+.... ++..+||++.+..    .+-.+|+.++... +|+|++++.+.+..+.+.++|+|
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            4455666789999999998888754 8889999997542    2234566444444 79999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCC--C----------cCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYT--E----------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~--~----------~l~w~~r~~i~~~~~~~~n  617 (617)
                      .+.+|-|.+-++..+..  .          .++.-++-.++||||||.|
T Consensus       397 ~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~N  445 (612)
T KOG0603|consen  397 LLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGN  445 (612)
T ss_pred             hccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhh
Confidence            99999999888765421  1          1233366789999999988

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.67  E-value=5.4e-06  Score=80.25  Aligned_cols=111  Identities=15%  Similarity=0.256  Sum_probs=84.0

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCC-----eEEE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD-----ERML  577 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~-----~~~l  577 (617)
                      +.+.+-||-|+||.||....+. |+.||.|++...  .-...+.+.+|++++.-++|.|++.++..-....     +.|.
T Consensus        55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV  134 (449)
T KOG0664|consen   55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV  134 (449)
T ss_pred             CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence            3455789999999999988764 899999998643  2233467899999999999999999987765432     4678


Q ss_pred             EEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +.|.| ..+|++.|.++..-             +-|.+-+--+|.|+||||-|
T Consensus       135 ~TELm-QSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGN  186 (449)
T KOG0664|consen  135 LTELM-QSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGN  186 (449)
T ss_pred             HHHHH-HhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCcc
Confidence            88988 45888877764210             12455567789999999977

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=97.62  E-value=4.4e-06  Score=87.34  Aligned_cols=113  Identities=19%  Similarity=0.130  Sum_probs=91.4

Q ss_pred             CCCCcceecccCceeEEEEEEcCCc-EEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIEGQ-EIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~g~-~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ++.....||-|+||.|=........ ..|+|.+++.   .....+....|-.+|-+.+.+.||+|+--+.+..+.|++||
T Consensus       421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE  500 (732)
T KOG0614|consen  421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME  500 (732)
T ss_pred             hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence            3444557999999999888875533 4788888643   23344567889999999999999999988888999999999


Q ss_pred             ccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      -|-+|.|...|++... .            ..++.-+|..||-+||||.|
T Consensus       501 aClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPEN  550 (732)
T KOG0614|consen  501 ACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPEN  550 (732)
T ss_pred             hhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhh
Confidence            9999999999987542 1            23788899999999999988

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Probab=97.60  E-value=0.00069  Score=58.88  Aligned_cols=100  Identities=28%  Similarity=0.464  Sum_probs=64.7

Q ss_pred             CEEEeCCCeEEEEeeCCCCCCCcEEEEEecccCCCcEEEEcC-CCCCCCCCCceEEEeecCCceEEEecCCCcEEEEecC
Q 007129           31 ETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVAN-RDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNA  109 (617)
Q Consensus        31 ~~lvS~~g~F~~GF~~~~~~~~~~lgIw~~~~~~~tvVW~AN-r~~pv~~~~~~l~l~~~G~~~L~l~d~~~~~vWss~~  109 (617)
                      +.+.+.+|.+.|-|-..|+     | +.|..  ..++||..+ ...... ....+.|..+||  |||+|..+.++|+|..
T Consensus        12 ~p~~~~s~~~~L~l~~dGn-----L-vl~~~--~~~~iWss~~t~~~~~-~~~~~~L~~~GN--lvl~d~~~~~lW~Sf~   80 (114)
T PF01453_consen   12 SPLTSSSGNYTLILQSDGN-----L-VLYDS--NGSVIWSSNNTSGRGN-SGCYLVLQDDGN--LVLYDSSGNVLWQSFD   80 (114)
T ss_dssp             EEEEECETTEEEEEETTSE-----E-EEEET--TTEEEEE--S-TTSS--SSEEEEEETTSE--EEEEETTSEEEEESTT
T ss_pred             cccccccccccceECCCCe-----E-EEEcC--CCCEEEEecccCCccc-cCeEEEEeCCCC--EEEEeecceEEEeecC
Confidence            4565655888888877664     1 33432  357799994 333322 357899999999  9999999999999954


Q ss_pred             CCCCCCceEEEec--CCCEEEecCCCCCCCcceEeecCCCc
Q 007129          110 SRTARNPVAVLLE--SGNLVVKDGKDIDPDNFLWQSFDYPS  148 (617)
Q Consensus       110 ~~~~~~~~a~Lld--~GNlVl~~~~~~~~~~~lWqSFd~Pt  148 (617)
                      .  .........+  .||++ ...    ...+.|.|=+.|+
T Consensus        81 ~--ptdt~L~~q~l~~~~~~-~~~----~~~~sw~s~~dps  114 (114)
T PF01453_consen   81 Y--PTDTLLPGQKLGDGNVT-GKN----DSLTSWSSNTDPS  114 (114)
T ss_dssp             S--SS-EEEEEET--TSEEE-EES----TSSEEEESS----
T ss_pred             C--CccEEEeccCcccCCCc-ccc----ceEEeECCCCCCC
Confidence            2  3445566777  88888 543    2467898876663

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=97.58  E-value=0.00023  Score=72.57  Aligned_cols=110  Identities=27%  Similarity=0.354  Sum_probs=85.9

Q ss_pred             CCCcceecccCceeEEEEEEcCCcEEEEeecccCchh---hHHHHHHHHHHHHccCCC-cccceEEEEEeCCeEEEEEec
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQ---GMEEFENEVLLIAKLQHR-NLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~---~~~~f~~Ev~~l~~l~H~-nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      |.....||.|+||.||++...  ..+++|.+......   ....|.+|+.++..+.|+ +++++..........++++|+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   79 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY   79 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence            344568999999999999886  78899988754222   367899999999999988 799999999777778999999


Q ss_pred             cCCCCHHHHHhcCC---C-C------------CcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFL---Y-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~---~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +.+++|.+++....   . .            ..+...++..++|+|+||.|
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~n  131 (384)
T COG0515          80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPEN  131 (384)
T ss_pred             CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHH
Confidence            99999997776542   1 0            01334566679999999876

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.54  E-value=8.7e-05  Score=74.20  Aligned_cols=111  Identities=17%  Similarity=0.234  Sum_probs=77.7

Q ss_pred             cCCCCcceecccCceeEEEEEE-cCCcEEEEeecccCchhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVL-IEGQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l-~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      -+|...++||+|+||.++.|.- -+++.||||.-...+  ..-++..|....+.| ..++|...+-+-.++.+-.||+|.
T Consensus        28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL  105 (449)
T KOG1165|consen   28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL  105 (449)
T ss_pred             ccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence            4678889999999999999974 468999999764332  234566666666666 568888888888888888999998


Q ss_pred             cCCCCHHHHHh--cCCCC--Cc----------CCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIF--GFLYT--EH----------FFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~--~~~~~--~~----------l~w~~r~~i~~~~~~~~n  617 (617)
                      + +-||.++.-  +.+..  ..          +..-+--++|-+||||.|
T Consensus       106 L-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdN  154 (449)
T KOG1165|consen  106 L-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDN  154 (449)
T ss_pred             h-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccc
Confidence            8 778887643  22211  00          111123356678999987

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=97.46  E-value=5.5e-05  Score=79.56  Aligned_cols=111  Identities=16%  Similarity=0.178  Sum_probs=87.2

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccC------CCcccceEEEEEeCCeEEE
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQ------HRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~------H~nlv~l~g~~~~~~~~~l  577 (617)
                      .|......|+|-|+.|.++.... |+.||||++... ....+.=++|+++|.+|+      .-|.++|+-.+...++++|
T Consensus       433 RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLCl  511 (752)
T KOG0670|consen  433 RYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCL  511 (752)
T ss_pred             eeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEE
Confidence            35545568999999999998754 889999999753 333456678999999985      3488999998999999999


Q ss_pred             EEeccCCCCHHHHHhcCCCCC----------------cCCHHHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTE----------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~----------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+|-+ .-+|.+.|..-.++.                .|..-+++.|+|-||||-|
T Consensus       512 VFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDN  566 (752)
T KOG0670|consen  512 VFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDN  566 (752)
T ss_pred             Eehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccc
Confidence            99987 558999987543221                2566789999999999987

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.33  E-value=0.00021  Score=78.67  Aligned_cols=112  Identities=14%  Similarity=0.136  Sum_probs=70.6

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchh------------------------------hHH--------
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQ------------------------------GME--------  545 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~------------------------------~~~--------  545 (617)
                      .|.. +.||.|++|+||++.+++ |+.||||.+++....                              -.+        
T Consensus       121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~  199 (537)
T PRK04750        121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD  199 (537)
T ss_pred             hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence            4665 689999999999999988 999999998743110                              001        


Q ss_pred             --HHHHHHHHHHccC----CCcccceEEEEEe-CCeEEEEEeccCCCCHHHH--HhcCCC-CCcCC---------HHHHH
Q 007129          546 --EFENEVLLIAKLQ----HRNLVKLIGCCTQ-RDERMLIYEYLPNKSLNDF--IFGFLY-TEHFF---------WSFFF  606 (617)
Q Consensus       546 --~f~~Ev~~l~~l~----H~nlv~l~g~~~~-~~~~~lv~E~~~~GsL~~~--L~~~~~-~~~l~---------w~~r~  606 (617)
                        +|.+|+..+.+++    +.+.+.+-..+.+ ....+|||||++++.|.++  +..... ...+.         =-.+.
T Consensus       200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~~  279 (537)
T PRK04750        200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRD  279 (537)
T ss_pred             hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHhC
Confidence              2455555444442    4433433333322 4567899999999999874  322111 00111         11366


Q ss_pred             hhhhcccccCC
Q 007129          607 SFENLSLVDRN  617 (617)
Q Consensus       607 ~i~~~~~~~~n  617 (617)
                      .+.|+|++|-|
T Consensus       280 GffHaDpHPGN  290 (537)
T PRK04750        280 GFFHADMHPGN  290 (537)
T ss_pred             CeeeCCCChHH
Confidence            88999999987

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=97.15  E-value=0.00012  Score=72.94  Aligned_cols=89  Identities=21%  Similarity=0.256  Sum_probs=66.9

Q ss_pred             CcEEEEeeccc--CchhhHHHHHHHHHHHHccCCCcccceEEEEEeCC------eEEEEEeccCCCCHHHHHhcCCC---
Q 007129          528 GQEIAAKRLSK--SSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD------ERMLIYEYLPNKSLNDFIFGFLY---  596 (617)
Q Consensus       528 g~~vAvK~l~~--~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~------~~~lv~E~~~~GsL~~~L~~~~~---  596 (617)
                      ++.||+|++..  ......+.-.+|..++..+.|+|+++++.++....      +.++|+||| ..+|...+.-..-   
T Consensus        41 ~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m-~~nl~~vi~~elDH~t  119 (369)
T KOG0665|consen   41 GRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELM-DANLCQVILMELDHET  119 (369)
T ss_pred             cCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhh-hhHHHHHHHHhcchHH
Confidence            77899998743  22344566788999999999999999999987643      469999999 5688888762210   


Q ss_pred             --------CCcCCHHHHHhhhhcccccCC
Q 007129          597 --------TEHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       597 --------~~~l~w~~r~~i~~~~~~~~n  617 (617)
                              ...+...++..|+||||||+|
T Consensus       120 is~i~yq~~~~ik~lhs~~IihRdLkPsn  148 (369)
T KOG0665|consen  120 ISYILYQMLCGIKHLHSAGIIHRDLKPSN  148 (369)
T ss_pred             HHHHHHHHHHHHHHHHhcceeecccCccc
Confidence                    011334578899999999998

>cd05151 ChoK Choline Kinase (ChoK)

Probab=96.83  E-value=0.0028  Score=58.87  Aligned_cols=76  Identities=16%  Similarity=0.100  Sum_probs=54.4

Q ss_pred             ceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCccc-ceEEEEEeCCeEEEEEeccCCCCHH
Q 007129          510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV-KLIGCCTQRDERMLIYEYLPNKSLN  588 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv-~l~g~~~~~~~~~lv~E~~~~GsL~  588 (617)
                      +.|+.|.++.||+.... ++.+++|....... ....+.+|+..+..+.+.+++ +++.+.  ....++||||+++.++.
T Consensus         4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~   79 (170)
T cd05151           4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELL   79 (170)
T ss_pred             eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccc
Confidence            57889999999999874 77899998754321 223567888888888655544 444443  33457999999998876


Q ss_pred             H
Q 007129          589 D  589 (617)
Q Consensus       589 ~  589 (617)
                      .
T Consensus        80 ~   80 (170)
T cd05151          80 T   80 (170)
T ss_pred             c
Confidence            4

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins

Probab=96.31  E-value=0.0034  Score=49.81  Aligned_cols=49  Identities=20%  Similarity=0.388  Sum_probs=35.4

Q ss_pred             ecccCCCCcceeeecccchHHHHHHHhhcccccccccccccCCCCceEecccc
Q 007129          349 ESVKLPDTRFSLVDNKISLLECKELCSKNCSCTAYANADVRGGGSGCLLWFHD  401 (617)
Q Consensus       349 ~~~~~p~~~~~~~~~~~s~~~C~~~Cl~nCsC~a~~~~~~~~~~~gC~~~~~~  401 (617)
                      +++.++..+..... ..+.++|+..|+.+|+|.||.|..   +...|.++...
T Consensus        10 ~~~~~~g~d~~~~~-~~s~~~Cq~~C~~~~~C~afT~~~---~~~~C~lk~~~   58 (73)
T cd01100          10 SNVDFRGGDLSTVF-ASSAEQCQAACTADPGCLAFTYNT---KSKKCFLKSSE   58 (73)
T ss_pred             CCCccccCCcceee-cCCHHHHHHHcCCCCCceEEEEEC---CCCeEEcccCC
Confidence            45666665554333 558999999999999999999863   34579875543

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=96.21  E-value=0.011  Score=57.51  Aligned_cols=82  Identities=15%  Similarity=0.227  Sum_probs=62.8

Q ss_pred             ceecccCceeEEEEEEcCCcEEEEeecccCch-hhHHHHHHHHHHHHccCC--CcccceEEEEEeCC---eEEEEEeccC
Q 007129          510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSG-QGMEEFENEVLLIAKLQH--RNLVKLIGCCTQRD---ERMLIYEYLP  583 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~-~~~~~f~~Ev~~l~~l~H--~nlv~l~g~~~~~~---~~~lv~E~~~  583 (617)
                      +.|+.|..+.||+....+|..+++|....... ....++.+|+.++..+.+  .++.+++.+.....   ..++||||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            46899999999999987668899998754322 134678999999999875  44577777776542   5689999999


Q ss_pred             CCCHHHHH
Q 007129          584 NKSLNDFI  591 (617)
Q Consensus       584 ~GsL~~~L  591 (617)
                      +.+|.+.+
T Consensus        84 G~~l~~~~   91 (223)
T cd05154          84 GRVLRDRL   91 (223)
T ss_pred             CEecCCCC
Confidence            98887755

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=95.06  E-value=0.073  Score=50.89  Aligned_cols=119  Identities=20%  Similarity=0.238  Sum_probs=79.9

Q ss_pred             CCccCHHHHHHhccCCCCcceecccCc-eeEEEEEEcCCcEEEEeeccc------------Cch---------hhHHHHH
Q 007129          491 LPIFDWMAIANATENFSDKNKLGEGGF-GPVYKGVLIEGQEIAAKRLSK------------SSG---------QGMEEFE  548 (617)
Q Consensus       491 ~~~~~~~~l~~at~~f~~~~~lG~G~f-G~Vykg~l~~g~~vAvK~l~~------------~~~---------~~~~~f~  548 (617)
                      +..|+.     -+.+|+..+.||.|.- |.|||..+ +|+.+|+|....            ...         ...+-|.
T Consensus        29 L~~F~~-----h~~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~  102 (207)
T PF13095_consen   29 LEPFTH-----HGDDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFN  102 (207)
T ss_pred             cCCcCC-----CCCcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHH
Confidence            445655     2267888899999999 99999998 677999999321            000         1123588


Q ss_pred             HHHHHHHccC---CCcc--cceEEEEEeC------------------CeEEEEEeccCCCC--HHHHHhcCCCCCcCCHH
Q 007129          549 NEVLLIAKLQ---HRNL--VKLIGCCTQR------------------DERMLIYEYLPNKS--LNDFIFGFLYTEHFFWS  603 (617)
Q Consensus       549 ~Ev~~l~~l~---H~nl--v~l~g~~~~~------------------~~~~lv~E~~~~Gs--L~~~L~~~~~~~~l~w~  603 (617)
                      .|.+..++|+   +.++  |+.+|+..=.                  ....||.||++...  -...+...  ...+.-.
T Consensus       103 ~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~~~~~~~~~~~--~~dl~~~  180 (207)
T PF13095_consen  103 CECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDPPLQIRDIPQM--LRDLKIL  180 (207)
T ss_pred             HHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCccccchhHHHHH--HHHHHHH
Confidence            9999888875   4466  8999987322                  12468999987665  11111110  1124456


Q ss_pred             HHHhhhhcccccCC
Q 007129          604 FFFSFENLSLVDRN  617 (617)
Q Consensus       604 ~r~~i~~~~~~~~n  617 (617)
                      ++..|..+|++++|
T Consensus       181 ~k~gI~~~Dv~~~n  194 (207)
T PF13095_consen  181 HKLGIVPRDVKPRN  194 (207)
T ss_pred             HHCCeeeccCcccc
Confidence            88999999999987

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=94.22  E-value=0.13  Score=48.17  Aligned_cols=106  Identities=16%  Similarity=0.121  Sum_probs=73.5

Q ss_pred             eecccCceeEEEEEEcCCcEEEEee-cccCch-------hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          511 KLGEGGFGPVYKGVLIEGQEIAAKR-LSKSSG-------QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       511 ~lG~G~fG~Vykg~l~~g~~vAvK~-l~~~~~-------~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      .+++|+-..++.+.+. |..+.+|. +++.-+       -..+.-.+|+.++.+++--.|....-+..++....|+|||.
T Consensus         3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I   81 (204)
T COG3642           3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI   81 (204)
T ss_pred             hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence            5778998999988763 44455553 222211       11234678999999887666665566667788888999999


Q ss_pred             CCCCHHHHHhcCCCC------CcCCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYT------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++-.|.++|......      ..+-=.++-.|+|+||-.+|
T Consensus        82 ~G~~lkd~l~~~~~~~~r~vG~~vg~lH~~givHGDLTtsN  122 (204)
T COG3642          82 EGELLKDALEEARPDLLREVGRLVGKLHKAGIVHGDLTTSN  122 (204)
T ss_pred             CChhHHHHHHhcchHHHHHHHHHHHHHHhcCeecCCCccce
Confidence            999999999876210      11233467789999999988

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=93.53  E-value=0.16  Score=48.62  Aligned_cols=104  Identities=10%  Similarity=0.028  Sum_probs=63.3

Q ss_pred             ceecccCceeEEEEEEcC-------CcEEEEeecccCc----------------------hhhHHHHH----HHHHHHHc
Q 007129          510 NKLGEGGFGPVYKGVLIE-------GQEIAAKRLSKSS----------------------GQGMEEFE----NEVLLIAK  556 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~-------g~~vAvK~l~~~~----------------------~~~~~~f~----~Ev~~l~~  556 (617)
                      ..||.|.-+.||.|.-.+       +..+|||..+...                      ....+.+.    +|...|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            368999999999997653       4789999754210                      00012233    78888888


Q ss_pred             cCC--CcccceEEEEEeCCeEEEEEeccCCCCHHH-HHhcCCCC---------C---cCCHH-HHHhhhhcccccCC
Q 007129          557 LQH--RNLVKLIGCCTQRDERMLIYEYLPNKSLND-FIFGFLYT---------E---HFFWS-FFFSFENLSLVDRN  617 (617)
Q Consensus       557 l~H--~nlv~l~g~~~~~~~~~lv~E~~~~GsL~~-~L~~~~~~---------~---~l~w~-~r~~i~~~~~~~~n  617 (617)
                      +..  -++.+++++    ...+|||||+.+..+.. .|.+....         .   .+.-. ++..|+|+||.++|
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~N  155 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYN  155 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence            743  455566654    45679999997653322 22221100         0   01111 56789999999987

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=93.47  E-value=0.32  Score=46.64  Aligned_cols=109  Identities=15%  Similarity=0.171  Sum_probs=76.6

Q ss_pred             CCcceecccCceeEEEEEEcCCcEEEEeecccCc----------------hhhHHHHHHHHHHHHccC------CCcccc
Q 007129          507 SDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSS----------------GQGMEEFENEVLLIAKLQ------HRNLVK  564 (617)
Q Consensus       507 ~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~----------------~~~~~~f~~Ev~~l~~l~------H~nlv~  564 (617)
                      +....||+|+.-.||...  +.....||......                ....+++.+|+.-...+.      +.+|.+
T Consensus         4 ~~~~~i~~G~~R~cy~HP--~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r   81 (199)
T PF10707_consen    4 SESDLIAQGGERDCYQHP--DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPR   81 (199)
T ss_pred             CCCcccccCCCceEEECC--CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCccccccc
Confidence            344689999999999754  44456677775443                122456677776554444      889999


Q ss_pred             eEEEEEeCCeEEEEEeccC------CCCHHHHHhcCCCC--------CcCCHHHHHhhhhcccccCC
Q 007129          565 LIGCCTQRDERMLIYEYLP------NKSLNDFIFGFLYT--------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       565 l~g~~~~~~~~~lv~E~~~------~GsL~~~L~~~~~~--------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++|........-+|+|.+.      .-+|.+++......        ...+|-.+.+|+..|++|.|
T Consensus        82 ~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~~~~~~L~~f~~~l~~~~Iv~~dl~~~N  148 (199)
T PF10707_consen   82 FYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGGLTEELRQALDEFKRYLLDHHIVIRDLNPHN  148 (199)
T ss_pred             EeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCCccHHHHHHHHHHHHHHHHcCCeecCCCccc
Confidence            9999999888889999753      34688888654321        23456677899999999988

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PF15102 TMEM154: TMEM154 protein family

Probab=93.16  E-value=0.14  Score=45.48  Aligned_cols=30  Identities=33%  Similarity=0.445  Sum_probs=12.5

Q ss_pred             EEEEeehhHHHHHHHHhhhhheeeeecccc
Q 007129          438 VAIVITSVLLVTGVILLGGFVYLWKRRHRK  467 (617)
Q Consensus       438 i~i~v~~~~~~~~l~~~~~~~~~~rr~~~~  467 (617)
                      ++|+|..+++++++++++++++++||+|.+
T Consensus        59 LmIlIP~VLLvlLLl~vV~lv~~~kRkr~K   88 (146)
T PF15102_consen   59 LMILIPLVLLVLLLLSVVCLVIYYKRKRTK   88 (146)
T ss_pred             EEEeHHHHHHHHHHHHHHHheeEEeecccC
Confidence            334444344444444444443444444443

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]

Probab=92.34  E-value=0.25  Score=33.63  Aligned_cols=29  Identities=21%  Similarity=0.363  Sum_probs=13.3

Q ss_pred             ceEEEEeehhHHHHHHHHhhhhheeeeecc
Q 007129          436 KKVAIVITSVLLVTGVILLGGFVYLWKRRH  465 (617)
Q Consensus       436 ~~i~i~v~~~~~~~~l~~~~~~~~~~rr~~  465 (617)
                      ..+.+.+++.++++++++++++ ++|+||+
T Consensus        11 vaIa~~VvVPV~vI~~vl~~~l-~~~~rR~   39 (40)
T PF08693_consen   11 VAIAVGVVVPVGVIIIVLGAFL-FFWYRRK   39 (40)
T ss_pred             EEEEEEEEechHHHHHHHHHHh-heEEecc
Confidence            3444444554444444444333 4455443

This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=92.03  E-value=0.14  Score=55.58  Aligned_cols=56  Identities=30%  Similarity=0.415  Sum_probs=48.8

Q ss_pred             HccCCCcccceEEEEEeCCeEEEEEeccCCCCHHHHHhcCCCCCcCCHHHHHhhhhcc
Q 007129          555 AKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFFFSFENLS  612 (617)
Q Consensus       555 ~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~GsL~~~L~~~~~~~~l~w~~r~~i~~~~  612 (617)
                      ..++|.|+.+++|.+..+++.++|.+|++.|+|.+.|...  ...+||..++.++.+-
T Consensus         2 ~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~--~~~~d~~F~~s~~rdi   57 (484)
T KOG1023|consen    2 RQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE--DIKLDYFFILSFIRDI   57 (484)
T ss_pred             cccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc--ccCccHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999874  4568999888776543

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=91.60  E-value=0.76  Score=43.19  Aligned_cols=108  Identities=17%  Similarity=0.133  Sum_probs=70.2

Q ss_pred             cceecccCceeEEEEEEcCCcEEEEeec-ccCc-------hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          509 KNKLGEGGFGPVYKGVLIEGQEIAAKRL-SKSS-------GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       509 ~~~lG~G~fG~Vykg~l~~g~~vAvK~l-~~~~-------~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ...+-+|+-+.|+++.+ .|+...||.- .+.-       .-....-++|++.+.+++--.|..-.-++.+...-.|+||
T Consensus        12 l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME   90 (229)
T KOG3087|consen   12 LELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME   90 (229)
T ss_pred             ceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence            45788999999999987 5666555543 2211       1123456889999998865555544445556666678999


Q ss_pred             ccCC-CCHHHHHhcCCCCCc-----CCHH----------HHHhhhhcccccCC
Q 007129          581 YLPN-KSLNDFIFGFLYTEH-----FFWS----------FFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~-GsL~~~L~~~~~~~~-----l~w~----------~r~~i~~~~~~~~n  617 (617)
                      |.++ .++.+|+........     .+..          ++=.|||+||--+|
T Consensus        91 ~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSN  143 (229)
T KOG3087|consen   91 FIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSN  143 (229)
T ss_pred             eccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccc
Confidence            9966 478888875432111     1222          34478999998777

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=91.29  E-value=0.04  Score=60.14  Aligned_cols=107  Identities=20%  Similarity=0.152  Sum_probs=78.7

Q ss_pred             eecccCceeEEEEEE----cCCcEEEEeecccCchh--hHHHHHHHHHHHHccC-CCcccceEEEEEeCCeEEEEEeccC
Q 007129          511 KLGEGGFGPVYKGVL----IEGQEIAAKRLSKSSGQ--GMEEFENEVLLIAKLQ-HRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       511 ~lG~G~fG~Vykg~l----~~g~~vAvK~l~~~~~~--~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      .+|+|.||.|+...-    +.+..+|.|.+++.+..  .......|..++...+ ||.+|++.-++......+++++|..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            368999999875432    22667888887643211  1124456667777776 9999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|.|...+......             -.++..+.+.||.+|+|+.|
T Consensus        81 gg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~en  127 (612)
T KOG0603|consen   81 GGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLEN  127 (612)
T ss_pred             cchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccc
Confidence            99998777654321             13677788999999999876

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=91.25  E-value=0.53  Score=43.94  Aligned_cols=78  Identities=21%  Similarity=0.328  Sum_probs=55.9

Q ss_pred             cceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCCHH
Q 007129          509 KNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLN  588 (617)
Q Consensus       509 ~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~GsL~  588 (617)
                      ...|++|.+|.||.|.+ .|..+|+|.-+..  .....+..|++++..+...++..=+-.+   ++..+.|||+.+-.|.
T Consensus        27 ~~~L~KG~~s~Vyl~~~-~~~~~a~Kvrr~d--s~r~~l~kEakiLeil~g~~~~p~vy~y---g~~~i~me~i~G~~L~  100 (201)
T COG2112          27 EKELAKGTTSVVYLGEW-RGGEVALKVRRRD--SPRRNLEKEAKILEILAGEGVTPEVYFY---GEDFIRMEYIDGRPLG  100 (201)
T ss_pred             hhhhhcccccEEEEeec-cCceEEEEEecCC--cchhhHHHHHHHHHHhhhcCCCceEEEe---chhhhhhhhhcCcchh
Confidence            45899999999999988 4558888876543  3457889999999888766665432222   2234559999888887


Q ss_pred             HHHh
Q 007129          589 DFIF  592 (617)
Q Consensus       589 ~~L~  592 (617)
                      +.-.
T Consensus       101 ~~~~  104 (201)
T COG2112         101 KLEI  104 (201)
T ss_pred             hhhh
Confidence            6654

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=91.17  E-value=0.095  Score=36.46  Aligned_cols=33  Identities=24%  Similarity=0.573  Sum_probs=25.5

Q ss_pred             cccccc-cccCCceeeccCCCCcccccCCCCCcC
Q 007129          285 DQCDNY-ALCGAYAVCNMNSNSAKCECLEGFVPK  317 (617)
Q Consensus       285 ~~C~~~-~~CG~~g~C~~~~~~~~C~C~~Gf~~~  317 (617)
                      |+|... ..|.+++.|......+.|.|++||+..
T Consensus         3 dEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~~~   36 (42)
T PF07645_consen    3 DECAEGPHNCPENGTCVNTEGSYSCSCPPGYELN   36 (42)
T ss_dssp             STTTTTSSSSSTTSEEEEETTEEEEEESTTEEEC
T ss_pred             cccCCCCCcCCCCCEEEcCCCCEEeeCCCCcEEC
Confidence            567774 489999999765445589999999843

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=91.12  E-value=0.4  Score=52.82  Aligned_cols=86  Identities=16%  Similarity=0.283  Sum_probs=56.0

Q ss_pred             CCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhh------------------------------HHH--------
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQG------------------------------MEE--------  546 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~------------------------------~~~--------  546 (617)
                      .|.. +-|+.++-|+||++++++|+.||||..++.-...                              .++        
T Consensus       127 eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~E  205 (517)
T COG0661         127 EFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREE  205 (517)
T ss_pred             HcCC-CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHH
Confidence            3543 5789999999999999999999999975431110                              111        


Q ss_pred             --HHHHHHHHHcc----C-CCcccceEEEEEeCCeEEEEEeccCCCCHHHHH
Q 007129          547 --FENEVLLIAKL----Q-HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI  591 (617)
Q Consensus       547 --f~~Ev~~l~~l----~-H~nlv~l~g~~~~~~~~~lv~E~~~~GsL~~~L  591 (617)
                        |.+|+.-+.++    + .+++.=-.-|..-.....|+|||+++-.+.+..
T Consensus       206 lDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~  257 (517)
T COG0661         206 LDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIA  257 (517)
T ss_pred             hCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHH
Confidence              34455444443    2 233322222333356788999999999998884

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=89.45  E-value=0.027  Score=65.23  Aligned_cols=111  Identities=14%  Similarity=0.145  Sum_probs=75.7

Q ss_pred             CCCCcceecccCceeEEEEEEcCCcEEEEeecccCc-hhhHHHHHHHHHH--HHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSS-GQGMEEFENEVLL--IAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~-~~~~~~f~~Ev~~--l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ++...+.||.+.|=+|.+++.+.|. |.||..-+.. .-..+.|.++++-  +.-++|||.+.+.-.-......|||-+|
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy  102 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY  102 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence            4566678999999999999987776 8888875433 3334556555543  3445899999876554445556788888


Q ss_pred             cCCCCHHHHHhcCCC--C-----------CcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLY--T-----------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~--~-----------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ..+ +|.+-|-.+..  .           ..++=.++..|.|+|||-.|
T Consensus       103 vkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsEN  150 (1431)
T KOG1240|consen  103 VKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSEN  150 (1431)
T ss_pred             Hhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccce
Confidence            844 77777643211  0           12334488999999999877

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=89.44  E-value=0.71  Score=46.85  Aligned_cols=111  Identities=23%  Similarity=0.246  Sum_probs=65.8

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeeccc---CchhhHHHHHHHHHHHHccCC-----------CcccceEEEEE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSK---SSGQGMEEFENEVLLIAKLQH-----------RNLVKLIGCCT  570 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~---~~~~~~~~f~~Ev~~l~~l~H-----------~nlv~l~g~~~  570 (617)
                      +...+.||.|+++.||.++... ++.+|||....   ......+++++|...+..+.+           .-++.+--.-.
T Consensus        14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i   93 (288)
T PF14531_consen   14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI   93 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred             EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence            3445689999999999999876 89999998742   233456788888876665433           12222211111


Q ss_pred             e--------CC--------eEEEEEeccCCCCHHHHHh---cCCCC-C----------------cCCHHHHHhhhhcccc
Q 007129          571 Q--------RD--------ERMLIYEYLPNKSLNDFIF---GFLYT-E----------------HFFWSFFFSFENLSLV  614 (617)
Q Consensus       571 ~--------~~--------~~~lv~E~~~~GsL~~~L~---~~~~~-~----------------~l~w~~r~~i~~~~~~  614 (617)
                      .        ..        ..+++|+-+ .++|.+++.   ..... .                ..-+-++..|+|+||+
T Consensus        94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~  172 (288)
T PF14531_consen   94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK  172 (288)
T ss_dssp             TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred             cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence            1        11        135677766 678887743   22111 1                1234467788899999


Q ss_pred             cCC
Q 007129          615 DRN  617 (617)
Q Consensus       615 ~~n  617 (617)
                      |.|
T Consensus       173 ~~n  175 (288)
T PF14531_consen  173 PEN  175 (288)
T ss_dssp             GGG
T ss_pred             eee
Confidence            877

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=89.41  E-value=0.34  Score=31.58  Aligned_cols=31  Identities=23%  Similarity=0.587  Sum_probs=22.8

Q ss_pred             cccccccCCceeeccCCCCcccccCCCCCcC
Q 007129          287 CDNYALCGAYAVCNMNSNSAKCECLEGFVPK  317 (617)
Q Consensus       287 C~~~~~CG~~g~C~~~~~~~~C~C~~Gf~~~  317 (617)
                      |.....|..++.|......+.|.|++||...
T Consensus         2 C~~~~~C~~~~~C~~~~~~~~C~C~~g~~g~   32 (36)
T cd00053           2 CAASNPCSNGGTCVNTPGSYRCVCPPGYTGD   32 (36)
T ss_pred             CCCCCCCCCCCEEecCCCCeEeECCCCCccc
Confidence            4435678889999765444589999999654

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=89.26  E-value=0.11  Score=58.50  Aligned_cols=109  Identities=17%  Similarity=0.185  Sum_probs=70.1

Q ss_pred             CcceecccCceeEEEEEEcC-CcEEEEeecc----cC-ch-hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          508 DKNKLGEGGFGPVYKGVLIE-GQEIAAKRLS----KS-SG-QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       508 ~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~----~~-~~-~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ..+.+|.|.+|.|+...... ....+.|...    .. .. .....+..|..+-..+.|+|++..+....+.....-+||
T Consensus       322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE  401 (601)
T KOG0590|consen  322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME  401 (601)
T ss_pred             ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence            45689999999776665433 2223333221    11 11 111225667777778899999887766666555555699


Q ss_pred             ccCCCCHHHHHhcCCC--CCc-----------CCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLY--TEH-----------FFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~--~~~-----------l~w~~r~~i~~~~~~~~n  617 (617)
                      |+++ +|..++.+..+  ...           +...+-..|+|+|+|+.|
T Consensus       402 ~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~en  450 (601)
T KOG0590|consen  402 YCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLEN  450 (601)
T ss_pred             cccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCcccc
Confidence            9999 99999987522  111           244566678999999987

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=89.10  E-value=0.21  Score=43.71  Aligned_cols=43  Identities=21%  Similarity=0.352  Sum_probs=32.5

Q ss_pred             ceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHH
Q 007129          510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIA  555 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~  555 (617)
                      +-|+.|+.|+||+|.+++|+.||||..++...   +.+...+.+|.
T Consensus        17 ~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~---~~i~~Dl~~l~   59 (119)
T PF03109_consen   17 EPLASASIAQVHRARLKDGEEVAVKVQRPGIE---EQIEADLRILR   59 (119)
T ss_pred             chhhheehhhheeeeecccchhhhhhcchHHH---HHHHHHHHHHH
Confidence            57999999999999999999999999865432   34444444443

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>KOG1219 consensus Uncharacterized conserved protein, contains laminin, cadherin and EGF domains [Signal transduction mechanisms]

Probab=88.67  E-value=0.73  Score=57.13  Aligned_cols=35  Identities=20%  Similarity=0.482  Sum_probs=25.4

Q ss_pred             cccccccccCCceeeccCC-CCcccccCCCCCcCCcc
Q 007129          285 DQCDNYALCGAYAVCNMNS-NSAKCECLEGFVPKSPS  320 (617)
Q Consensus       285 ~~C~~~~~CG~~g~C~~~~-~~~~C~C~~Gf~~~~~~  320 (617)
                      +.|. -..|-.-|.|+..+ ..+.|.||+-|..+.-+
T Consensus      3865 d~C~-~npCqhgG~C~~~~~ggy~CkCpsqysG~~CE 3900 (4289)
T KOG1219|consen 3865 DPCN-DNPCQHGGTCISQPKGGYKCKCPSQYSGNHCE 3900 (4289)
T ss_pred             cccc-cCcccCCCEecCCCCCceEEeCcccccCcccc
Confidence            5664 35688888897653 34589999999887543

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=88.41  E-value=0.25  Score=53.84  Aligned_cols=110  Identities=17%  Similarity=0.093  Sum_probs=77.0

Q ss_pred             CCcceecc--cCceeEEEEEE--c-CCcEEEEeeccc--CchhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEE
Q 007129          507 SDKNKLGE--GGFGPVYKGVL--I-EGQEIAAKRLSK--SSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       507 ~~~~~lG~--G~fG~Vykg~l--~-~g~~vAvK~l~~--~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      .....+|.  |.+|.||++..  . ++..+|+|+-+.  ..+.....=.+|+....++ .|+|.|+.......++..++-
T Consensus       117 ~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiq  196 (524)
T KOG0601|consen  117 PISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQ  196 (524)
T ss_pred             ccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceee
Confidence            33457899  99999999988  3 377899998432  2223333335566666666 499999988888889999999


Q ss_pred             EeccCCCCHHHHHhcCCC------------------CCcCCHHHHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLY------------------TEHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~------------------~~~l~w~~r~~i~~~~~~~~n  617 (617)
                      .|++. .+|..+.+....                  ...|.|.+--.|.+.|++|.|
T Consensus       197 tE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~  252 (524)
T KOG0601|consen  197 TELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPAN  252 (524)
T ss_pred             ecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhh
Confidence            99884 788888764321                  113455555678888888765

>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region

Probab=87.40  E-value=0.7  Score=41.49  Aligned_cols=19  Identities=11%  Similarity=-0.043  Sum_probs=9.7

Q ss_pred             cceEEEEeehhHHHHHHHH
Q 007129          435 KKKVAIVITSVLLVTGVIL  453 (617)
Q Consensus       435 ~~~i~i~v~~~~~~~~l~~  453 (617)
                      .+.++|.+++++.+.++++
T Consensus        47 nknIVIGvVVGVGg~ill~   65 (154)
T PF04478_consen   47 NKNIVIGVVVGVGGPILLG   65 (154)
T ss_pred             CccEEEEEEecccHHHHHH
Confidence            3456666666554444433

The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].

>PLN00181 protein SPA1-RELATED; Provisional

Probab=87.32  E-value=0.11  Score=61.26  Aligned_cols=60  Identities=15%  Similarity=0.042  Sum_probs=41.6

Q ss_pred             cCC-CcccceEEEE-------EeCCeEEEEEeccCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccc
Q 007129          557 LQH-RNLVKLIGCC-------TQRDERMLIYEYLPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLV  614 (617)
Q Consensus       557 l~H-~nlv~l~g~~-------~~~~~~~lv~E~~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~  614 (617)
                      ++| .||+++++.+       .+....++++||+ .++|.++|......              ..|+..+...|+|+|||
T Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlK  107 (793)
T PLN00181         29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVR  107 (793)
T ss_pred             hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Confidence            345 5777788776       2334567888988 56999999754211              11345577789999999


Q ss_pred             cCC
Q 007129          615 DRN  617 (617)
Q Consensus       615 ~~n  617 (617)
                      |.|
T Consensus       108 P~N  110 (793)
T PLN00181        108 PSC  110 (793)
T ss_pred             chh
Confidence            998

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=86.19  E-value=0.63  Score=31.16  Aligned_cols=31  Identities=29%  Similarity=0.686  Sum_probs=23.2

Q ss_pred             cccccccccCCceeeccCCCCcccccCCCCC
Q 007129          285 DQCDNYALCGAYAVCNMNSNSAKCECLEGFV  315 (617)
Q Consensus       285 ~~C~~~~~CG~~g~C~~~~~~~~C~C~~Gf~  315 (617)
                      ++|.....|...+.|........|.|++||.
T Consensus         3 ~~C~~~~~C~~~~~C~~~~g~~~C~C~~g~~   33 (39)
T smart00179        3 DECASGNPCQNGGTCVNTVGSYRCECPPGYT   33 (39)
T ss_pred             ccCcCCCCcCCCCEeECCCCCeEeECCCCCc
Confidence            4576546788888997654445899999997

>PF00024 PAN_1: PAN domain This Prosite entry concerns apple domains, a subset of PAN domains; InterPro: IPR003014 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []

Probab=85.87  E-value=1.2  Score=35.15  Aligned_cols=56  Identities=23%  Similarity=0.405  Sum_probs=40.9

Q ss_pred             ceEEeecccCCCCcceeeecccchHHHHHHHhhccc-ccccccccccCCCCceEecccccc
Q 007129          344 GFLKRESVKLPDTRFSLVDNKISLLECKELCSKNCS-CTAYANADVRGGGSGCLLWFHDLI  403 (617)
Q Consensus       344 ~f~~~~~~~~p~~~~~~~~~~~s~~~C~~~Cl~nCs-C~a~~~~~~~~~~~gC~~~~~~l~  403 (617)
                      .|.++.+..+........ ...++++|...|+.+=. |.+|.|..   ....|.+......
T Consensus         3 ~f~~~~~~~l~~~~~~~~-~v~s~~~C~~~C~~~~~~C~s~~y~~---~~~~C~L~~~~~~   59 (79)
T PF00024_consen    3 AFERIPGYRLSGHSIKEI-NVPSLEECAQLCLNEPRRCKSFNYDP---SSKTCYLSSSDRS   59 (79)
T ss_dssp             TEEEEEEEEEESCEEEEE-EESSHHHHHHHHHHSTT-ESEEEEET---TTTEEEEECSSSS
T ss_pred             CeEEECCEEEeCCcceEE-cCCCHHHHHhhcCcCcccCCeEEEEC---CCCEEEEcCCCCC
Confidence            477777777776544444 45599999999999999 99999864   3457988655443

These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs It has been shown that, the N-terminal N domains of members of the plasminogen/hepatocyte growth factor family, the apple domains of the plasma prekallikrein/coagulation factor XI family, and domains of various nematode proteins belong to the same module superfamily, the PAN module []. PAN contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge that links the N and C termini of the domain.; PDB: 1GP9_C 2QJ2_B 1GMO_H 1NK1_B 3MKP_B 1BHT_B 3HN4_A 1GMN_A 3HMS_A 3HMT_B ....

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=84.06  E-value=0.33  Score=52.18  Aligned_cols=74  Identities=22%  Similarity=0.379  Sum_probs=57.8

Q ss_pred             HHhccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCC
Q 007129          500 ANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD  573 (617)
Q Consensus       500 ~~at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~  573 (617)
                      ..-.++|.....+|+|+||+|+.+.... +-..|||+|.-.. ........+|+..++++.|++++++...+..++
T Consensus        45 sr~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~~~  120 (516)
T KOG1033|consen   45 SREANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYERP  120 (516)
T ss_pred             hhhhccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceecCC
Confidence            3345778888999999999999988765 4478999986433 334457888999999999999999877666543

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=83.43  E-value=0.44  Score=30.91  Aligned_cols=26  Identities=27%  Similarity=0.556  Sum_probs=19.7

Q ss_pred             ccCCceeeccCC-CCcccccCCCCCcC
Q 007129          292 LCGAYAVCNMNS-NSAKCECLEGFVPK  317 (617)
Q Consensus       292 ~CG~~g~C~~~~-~~~~C~C~~Gf~~~  317 (617)
                      .|...|.|.... ..+.|.|++||...
T Consensus         5 ~C~n~g~C~~~~~~~y~C~C~~G~~G~   31 (32)
T PF00008_consen    5 PCQNGGTCIDLPGGGYTCECPPGYTGK   31 (32)
T ss_dssp             SSTTTEEEEEESTSEEEEEEBTTEEST
T ss_pred             cCCCCeEEEeCCCCCEEeECCCCCccC
Confidence            688889997543 44589999999753

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=83.11  E-value=14  Score=37.21  Aligned_cols=106  Identities=12%  Similarity=-0.012  Sum_probs=62.8

Q ss_pred             eecccCceeEEEEEEcCCcEEEEeecccCch-----------hhHHHHHHHHHHHHccC--CCcccceEEEEEe-----C
Q 007129          511 KLGEGGFGPVYKGVLIEGQEIAAKRLSKSSG-----------QGMEEFENEVLLIAKLQ--HRNLVKLIGCCTQ-----R  572 (617)
Q Consensus       511 ~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~-----------~~~~~f~~Ev~~l~~l~--H~nlv~l~g~~~~-----~  572 (617)
                      .+-+.....|.+..+ +|+.+.||+......           .....+.+|...+.++.  .-...+++++...     .
T Consensus        29 ~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~  107 (268)
T PRK15123         29 VFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT  107 (268)
T ss_pred             EEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence            333333344667666 677899996642211           11124778888887774  3334455556543     2


Q ss_pred             CeEEEEEeccCCC-CHHHHHhcCC-CCC--------------cCCHHHHHhhhhcccccCC
Q 007129          573 DERMLIYEYLPNK-SLNDFIFGFL-YTE--------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       573 ~~~~lv~E~~~~G-sL~~~L~~~~-~~~--------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      ..-+||+|++++- +|.+++.+-. ...              .+-=.+...|+|+|+.++|
T Consensus       108 ~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~N  168 (268)
T PRK15123        108 RTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICH  168 (268)
T ss_pred             ceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhh
Confidence            3467999999876 8999885311 000              0111245579999999987

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=82.61  E-value=2  Score=40.85  Aligned_cols=95  Identities=17%  Similarity=0.073  Sum_probs=54.6

Q ss_pred             eEEEEEEcCCcEEEEeecccC--------------ch------------hhHHHHHHHHHHHHccCCC--cccceEEEEE
Q 007129          519 PVYKGVLIEGQEIAAKRLSKS--------------SG------------QGMEEFENEVLLIAKLQHR--NLVKLIGCCT  570 (617)
Q Consensus       519 ~Vykg~l~~g~~vAvK~l~~~--------------~~------------~~~~~f~~Ev~~l~~l~H~--nlv~l~g~~~  570 (617)
                      .||.|...+|..+|||.-+..              .+            .......+|...|.++...  ++.+++.+. 
T Consensus         1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~-   79 (188)
T PF01163_consen    1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN-   79 (188)
T ss_dssp             EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred             CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence            389999888999999975321              00            0113467899999999765  455555442 


Q ss_pred             eCCeEEEEEeccC--CCCHHHHHhcC---CC-----CCcCC----HHHHHhhhhcccccCC
Q 007129          571 QRDERMLIYEYLP--NKSLNDFIFGF---LY-----TEHFF----WSFFFSFENLSLVDRN  617 (617)
Q Consensus       571 ~~~~~~lv~E~~~--~GsL~~~L~~~---~~-----~~~l~----w~~r~~i~~~~~~~~n  617 (617)
                         ...|||||++  +..+.......   ..     ...+.    --++..|+|+||-++|
T Consensus        80 ---~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~N  137 (188)
T PF01163_consen   80 ---RNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYN  137 (188)
T ss_dssp             ---TTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTS
T ss_pred             ---CCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceecCCChhh
Confidence               3469999998  54444332221   00     01122    1246789999999887

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=82.36  E-value=1.2  Score=29.29  Aligned_cols=32  Identities=25%  Similarity=0.613  Sum_probs=22.9

Q ss_pred             cccccccccCCceeeccCCCCcccccCCCCCc
Q 007129          285 DQCDNYALCGAYAVCNMNSNSAKCECLEGFVP  316 (617)
Q Consensus       285 ~~C~~~~~CG~~g~C~~~~~~~~C~C~~Gf~~  316 (617)
                      ++|.....|...+.|........|.|++||..
T Consensus         3 ~~C~~~~~C~~~~~C~~~~~~~~C~C~~g~~g   34 (38)
T cd00054           3 DECASGNPCQNGGTCVNTVGSYRCSCPPGYTG   34 (38)
T ss_pred             ccCCCCCCcCCCCEeECCCCCeEeECCCCCcC
Confidence            45765456888889975544458999999865

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>PRK10593 hypothetical protein; Provisional

Probab=82.10  E-value=4.3  Score=41.65  Aligned_cols=79  Identities=14%  Similarity=0.114  Sum_probs=56.3

Q ss_pred             CCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCC---CcccceEEEEEe---CCeEEEEE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQH---RNLVKLIGCCTQ---RDERMLIY  579 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H---~nlv~l~g~~~~---~~~~~lv~  579 (617)
                      ....+.||.|..+.||+-...+++ +.+|..+.  ......|..|...+..+..   ..+.++++.|..   .+..+|||
T Consensus        16 ~~~~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm   92 (297)
T PRK10593         16 LSRVECISEQPYAALWALYDSQGN-PMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL   92 (297)
T ss_pred             hheeeecCCccceeEEEEEcCCCC-EEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence            334568999999999998765553 55565432  1123578899998888743   467788888754   35679999


Q ss_pred             eccCCCCH
Q 007129          580 EYLPNKSL  587 (617)
Q Consensus       580 E~~~~GsL  587 (617)
                      |+++++++
T Consensus        93 E~i~G~~~  100 (297)
T PRK10593         93 ERLRGVSV  100 (297)
T ss_pred             eccCCEec
Confidence            99998765

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=81.56  E-value=2.8  Score=46.36  Aligned_cols=32  Identities=19%  Similarity=0.393  Sum_probs=27.4

Q ss_pred             CCCcceecccCceeEEEEEEcCCcEEEEeeccc
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSK  538 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~  538 (617)
                      |.. +.||.-+.|+|+++.+++|+.||||.-++
T Consensus       164 f~~-~piaaASlaQVhrA~L~~G~~VaVKVQ~P  195 (538)
T KOG1235|consen  164 FDE-EPIAAASLAQVHRARLKNGEDVAVKVQHP  195 (538)
T ss_pred             cCc-chhhhcchhheEEEEecCCCEEEEEecCc
Confidence            443 57999999999999999999999998654

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=81.32  E-value=0.35  Score=54.63  Aligned_cols=113  Identities=18%  Similarity=0.156  Sum_probs=78.3

Q ss_pred             CCCCcceecccCceeEEEEEEcC--CcEEEEeecccCc--hhhHHHHHHHHHHHHccC-CCcccceEEEEEeCCeEEEEE
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE--GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQ-HRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~--g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      .+...+.||+|.|+.|-......  ...+|+|.+....  ....+....|..+-..+. |+|++++++...+.+..+++.
T Consensus        21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~  100 (601)
T KOG0590|consen   21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL  100 (601)
T ss_pred             cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence            34445679999999988776533  3456777665332  111223334555555555 999999999999999999999


Q ss_pred             eccCCCCHHHHH-hcCC-C-------------CCcCCHHH-HHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFI-FGFL-Y-------------TEHFFWSF-FFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L-~~~~-~-------------~~~l~w~~-r~~i~~~~~~~~n  617 (617)
                      ||..+|++++.+ .... .             ...+...+ ...+.++|+||.|
T Consensus       101 ~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n  154 (601)
T KOG0590|consen  101 SYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSN  154 (601)
T ss_pred             CcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCcc
Confidence            999999999998 3321 0             12244445 6679999999986

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=81.26  E-value=1.9  Score=48.02  Aligned_cols=57  Identities=18%  Similarity=0.278  Sum_probs=46.0

Q ss_pred             CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          527 EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       527 ~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      ++.+|.|...+.......+...+.++.++.++||||++++....+.+..|||+|-+.
T Consensus        36 ~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~   92 (690)
T KOG1243|consen   36 DGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR   92 (690)
T ss_pred             cCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc
Confidence            477888888765544334456777889999999999999999999999999999863

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=80.98  E-value=9.7  Score=40.74  Aligned_cols=83  Identities=13%  Similarity=0.161  Sum_probs=57.0

Q ss_pred             ceecccCceeEEEEEEcCC-cEEEEeecccC-----c--hhhHHHHHHHHHHHHccC---CCcccceEEEEEeCCeEEEE
Q 007129          510 NKLGEGGFGPVYKGVLIEG-QEIAAKRLSKS-----S--GQGMEEFENEVLLIAKLQ---HRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~g-~~vAvK~l~~~-----~--~~~~~~f~~Ev~~l~~l~---H~nlv~l~g~~~~~~~~~lv  578 (617)
                      +.||.|.+..||+....+| +.+.||.-...     .  +...+.+..|.+.|..+.   ...+.+++.+  ..+..++|
T Consensus        32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV  109 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV  109 (401)
T ss_pred             eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence            5799999999999999776 48999975321     1  123456777777777652   2456667766  33557899


Q ss_pred             EeccCCCC-HHHHHhcC
Q 007129          579 YEYLPNKS-LNDFIFGF  594 (617)
Q Consensus       579 ~E~~~~Gs-L~~~L~~~  594 (617)
                      |||+++.. |.+.|...
T Consensus       110 ME~L~~~~~lr~~Ll~g  126 (401)
T PRK09550        110 MEDLSDHKILRKGLIDG  126 (401)
T ss_pred             EecCCCccHHHHHHhcC
Confidence            99998644 55665544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	617
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		6e-17
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		2e-16
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		2e-14
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		2e-14
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-13
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-13
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		2e-13
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		2e-12
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		1e-08
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		2e-08
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		2e-08
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		3e-08
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		7e-08
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		7e-08
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		8e-08
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		9e-08
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		1e-07
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		1e-07
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		1e-07
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-07
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		1e-07
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		1e-07
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		1e-07
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		1e-07
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		1e-07
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		1e-07
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-07
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		1e-07
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		1e-07
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-07
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		1e-07
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		1e-07
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-07
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		1e-07
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		1e-07
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		2e-07
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-07
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		2e-07
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-07
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		3e-07
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		3e-07
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		3e-07
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		3e-07
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		3e-07
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		3e-07
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		3e-07
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		3e-07
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		3e-07
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		3e-07
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		3e-07
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		3e-07
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		3e-07
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		4e-07
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		4e-07
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		1e-06
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		3e-06
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		7e-06
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		7e-06
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		1e-05
1fvr_A	327	Tie2 Kinase Domain Length = 327		1e-05
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		1e-05
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		2e-05
3a4o_X	286	Lyn Kinase Domain Length = 286		2e-05
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		3e-05
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		3e-05
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		3e-05
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		3e-05
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		3e-05
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		3e-05
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		3e-05
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		3e-05
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		3e-05
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		3e-05
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		3e-05
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		3e-05
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		3e-05
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		4e-05
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		4e-05
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		4e-05
2pl0_A	289	Lck Bound To Imatinib Length = 289		4e-05
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		4e-05
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		4e-05
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		4e-05
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		4e-05
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		4e-05
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		4e-05
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		4e-05
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		4e-05
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		5e-05
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		5e-05
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		6e-05
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		6e-05
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		6e-05
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		8e-05
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		9e-05
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		9e-05
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		9e-05
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		9e-05
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		9e-05
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		9e-05
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-04
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		1e-04
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		1e-04
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		1e-04
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		1e-04
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		1e-04
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		1e-04
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		1e-04
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		1e-04
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-04
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		1e-04
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		1e-04
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		1e-04
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		1e-04
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		1e-04
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		1e-04
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		1e-04
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-04
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		1e-04
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		1e-04
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		1e-04
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		1e-04
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		1e-04
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		1e-04
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		1e-04
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		1e-04
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		1e-04
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		1e-04
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		1e-04
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		1e-04
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		1e-04
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		1e-04
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-04
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-04
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-04
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		2e-04
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-04
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		2e-04
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		2e-04
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-04
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-04
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		2e-04
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		2e-04
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		2e-04
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		2e-04
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-04
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-04
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		3e-04
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		3e-04
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		3e-04
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		3e-04
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		3e-04
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		3e-04
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		5e-04
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		5e-04
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		5e-04
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		5e-04
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		5e-04
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		5e-04
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		5e-04
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		5e-04
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		5e-04
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		6e-04
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		6e-04
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		6e-04
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		6e-04
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		6e-04
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		7e-04
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		7e-04
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		7e-04
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		7e-04
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		7e-04
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		7e-04
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		7e-04
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		7e-04
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		8e-04
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		8e-04
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		8e-04
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		8e-04
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		8e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 45/99 (45%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Query: 490 ELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGME-EFE 548
           +L  F    +  A++NFS+KN LG GGFG VYKG L +G  +A KRL +   QG E +F+
Sbjct: 24  QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 549 NEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSL 587
            EV +I+   HRNL++L G C    ER+L+Y Y+ N S+
Sbjct: 84  TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 122

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/99 (44%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 490 ELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGME-EFE 548
           +L  F    +  A++NF +KN LG GGFG VYKG L +G  +A KRL +   QG E +F+
Sbjct: 16  QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 549 NEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSL 587
            EV +I+   HRNL++L G C    ER+L+Y Y+ N S+
Sbjct: 76  TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 114

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/107 (42%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Query: 487 EEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEE 546
           E   +P+ D   +  AT NF  K  +G G FG VYKGVL +G ++A KR +  S QG+EE
Sbjct: 25  ESYRVPLVD---LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEE 81
Query: 547 FENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFG 593
           FE E+  ++  +H +LV LIG C +R+E +LIY+Y+ N +L   ++G
Sbjct: 82  FETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG 128

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/107 (42%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Query: 487 EEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEE 546
           E   +P+ D   +  AT NF  K  +G G FG VYKGVL +G ++A KR +  S QG+EE
Sbjct: 25  ESYRVPLVD---LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEE 81
Query: 547 FENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFG 593
           FE E+  ++  +H +LV LIG C +R+E +LIY+Y+ N +L   ++G
Sbjct: 82  FETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG 128

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 11/106 (10%)
Query: 494 FDWMAIANATENFSDK------NKLGEGGFGPVYKGVLIEGQEIAAKRLSK----SSGQG 543
           F +  + N T NF ++      NK+GEGGFG VYKG  +    +A K+L+     ++ + 
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 73
Query: 544 MEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLND 589
            ++F+ E+ ++AK QH NLV+L+G  +  D+  L+Y Y+PN SL D
Sbjct: 74  KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 11/106 (10%)
Query: 494 FDWMAIANATENFSDK------NKLGEGGFGPVYKGVLIEGQEIAAKRLSK----SSGQG 543
           F +  + N T NF ++      NK+GEGGFG VYKG  +    +A K+L+     ++ + 
Sbjct: 9   FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 67
Query: 544 MEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLND 589
            ++F+ E+ ++AK QH NLV+L+G  +  D+  L+Y Y+PN SL D
Sbjct: 68  KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 113

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 11/106 (10%)
Query: 494 FDWMAIANATENFSDK------NKLGEGGFGPVYKGVLIEGQEIAAKRLSK----SSGQG 543
           F +  + N T NF ++      NK+GEGGFG VYKG  +    +A K+L+     ++ + 
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 73
Query: 544 MEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLND 589
            ++F+ E+ ++AK QH NLV+L+G  +  D+  L+Y Y+PN SL D
Sbjct: 74  KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 11/106 (10%)
Query: 494 FDWMAIANATENFSDK------NKLGEGGFGPVYKGVLIEGQEIAAKRLSK----SSGQG 543
           F +  + N T NF ++      NK GEGGFG VYKG  +    +A K+L+     ++ + 
Sbjct: 6   FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 64
Query: 544 MEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLND 589
            ++F+ E+ + AK QH NLV+L+G  +  D+  L+Y Y PN SL D
Sbjct: 65  KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLD 110

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 489 MELPIFDWMAIANATE----NFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLS- 537
           ME+P+ +    A   E          +LGE  FG VYKG L       + Q +A K L  
Sbjct: 7   MEMPLINQHKQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKD 66
Query: 538 KSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           K+ G   EEF +E +L A+LQH N+V L+G  T+     +I+ Y  +  L++F+
Sbjct: 67  KAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 120

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 49/87 (56%)
Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
           + + K+KLG G +G VY GV  +     A +  K     +EEF  E  ++ +++H NLV+
Sbjct: 33  DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 92
Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT      ++ EY+P  +L D++
Sbjct: 93  LLGVCTLEPPFYIVTEYMPYGNLLDYL 119

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 510 NKLGEGGFGPVYKGVLI------EGQEIAAKRLS-KSSGQGMEEFENEVLLIAKLQHRNL 562
            +LGE  FG VYKG L       + Q +A K L  K+ G   EEF +E +L A+LQH N+
Sbjct: 15  EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 563 VKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           V L+G  T+     +I+ Y  +  L++F+
Sbjct: 75  VCLLGVVTKDQPLSMIFSYCSHGDLHEFL 103

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 504 ENFSDKNKLGEGGFGPVYKGV---LIEGQE---IAAKRLSKSSGQGMEEFENEVLLIAKL 557
            N   K +LGEG FG V+      L   Q+   +A K L  +S    ++F  E  L+  L
Sbjct: 13  HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 558 QHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           QH ++VK  G C + D  ++++EY+ +  LN F+
Sbjct: 73  QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFL 106

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 50/87 (57%)
Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
           + + K+KLG G FG VY+GV  +     A +  K     +EEF  E  ++ +++H NLV+
Sbjct: 12  DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 71
Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT+     +I E++   +L D++
Sbjct: 72  LLGVCTREPPFYIITEFMTYGNLLDYL 98

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 509 KNKLGEGGFGPVYKGV---LIEGQE---IAAKRLSKSSGQGMEEFENEVLLIAKLQHRNL 562
           K +LGEG FG V+      L+  Q+   +A K L ++S    ++F+ E  L+  LQH+++
Sbjct: 23  KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 82
Query: 563 VKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           V+  G CT+    ++++EY+ +  LN F+
Sbjct: 83  VRFFGVCTEGRPLLMVFEYMRHGDLNRFL 111

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 509 KNKLGEGGFGPVYKGV---LIEGQE---IAAKRLSKSSGQGMEEFENEVLLIAKLQHRNL 562
           K +LGEG FG V+      L+  Q+   +A K L ++S    ++F+ E  L+  LQH+++
Sbjct: 17  KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 76
Query: 563 VKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           V+  G CT+    ++++EY+ +  LN F+
Sbjct: 77  VRFFGVCTEGRPLLMVFEYMRHGDLNRFL 105

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 509 KNKLGEGGFGPVYKGV---LIEGQE---IAAKRLSKSSGQGMEEFENEVLLIAKLQHRNL 562
           K +LGEG FG V+      L+  Q+   +A K L ++S    ++F+ E  L+  LQH+++
Sbjct: 46  KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 105
Query: 563 VKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           V+  G CT+    ++++EY+ +  LN F+
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFL 134

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
           + + K+KLG G +G VY+GV  +     A +  K     +EEF  E  ++ +++H NLV+
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 78
Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT+     +I E++   +L D++
Sbjct: 79  LLGVCTREPPFYIIIEFMTYGNLLDYL 105

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
           + + K+KLG G +G VY+GV  +     A +  K     +EEF  E  ++ +++H NLV+
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 78
Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT+     +I E++   +L D++
Sbjct: 79  LLGVCTREPPFYIITEFMTYGNLLDYL 105

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
           + + K+KLG G +G VY+GV  +     A +  K     +EEF  E  ++ +++H NLV+
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 73
Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT+     +I E++   +L D++
Sbjct: 74  LLGVCTREPPFYIITEFMTYGNLLDYL 100

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
           + + K+KLG G +G VY+GV  +     A +  K     +EEF  E  ++ +++H NLV+
Sbjct: 12  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 71
Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT+     +I E++   +L D++
Sbjct: 72  LLGVCTREPPFYIIIEFMTYGNLLDYL 98

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
           + + K+KLG G +G VY+GV  +     A +  K     +EEF  E  ++ +++H NLV+
Sbjct: 18  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 77
Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT+     +I E++   +L D++
Sbjct: 78  LLGVCTREPPFYIITEFMTYGNLLDYL 104

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
           + + K+KLG G +G VY+GV  +     A +  K     +EEF  E  ++ +++H NLV+
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 73
Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT+     +I E++   +L D++
Sbjct: 74  LLGVCTREPPFYIITEFMTYGNLLDYL 100

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
           + + K+KLG G +G VY+GV  +     A +  K     +EEF  E  ++ +++H NLV+
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 78
Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT+     +I E++   +L D++
Sbjct: 79  LLGVCTREPPFYIITEFMTYGNLLDYL 105

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
           + + K+KLG G +G VY+GV  +     A +  K     +EEF  E  ++ +++H NLV+
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 73
Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT+     +I E++   +L D++
Sbjct: 74  LLGVCTREPPFYIIIEFMTYGNLLDYL 100

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
           + + K+KLG G +G VY+GV  +     A +  K     +EEF  E  ++ +++H NLV+
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 73
Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT+     +I E++   +L D++
Sbjct: 74  LLGVCTREPPFYIIIEFMTYGNLLDYL 100

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
           + + K+KLG G +G VY+GV  +     A +  K     +EEF  E  ++ +++H NLV+
Sbjct: 15  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 74
Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT+     +I E++   +L D++
Sbjct: 75  LLGVCTREPPFYIIIEFMTYGNLLDYL 101

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 48/83 (57%)
Query: 509 KNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGC 568
           K+KLG G +G VY+GV  +     A +  K     +EEF  E  ++ +++H NLV+L+G 
Sbjct: 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 569 CTQRDERMLIYEYLPNKSLNDFI 591
           CT+     +I E++   +L D++
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYL 307

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
           + + K+KLG G +G VY+GV  +     A +  K     +EEF  E  ++ +++H NLV+
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 73
Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT+     +I E++   +L D++
Sbjct: 74  LLGVCTREPPFYIITEFMTYGNLLDYL 100

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
           + + K+KLG G +G VY+GV  +     A +  K     +EEF  E  ++ +++H NLV+
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 73
Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT+     +I E++   +L D++
Sbjct: 74  LLGVCTREPPFYIITEFMTYGNLLDYL 100

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
           + + K+KLG G +G VY+GV  +     A +  K     +EEF  E  ++ +++H NLV+
Sbjct: 16  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 75
Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT+     +I E++   +L D++
Sbjct: 76  LLGVCTREPPFYIITEFMTYGNLLDYL 102

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
           + + K+KLG G +G VY+GV  +     A +  K     +EEF  E  ++ +++H NLV+
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 78
Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT+     +I E++   +L D++
Sbjct: 79  LLGVCTREPPFYIITEFMTYGNLLDYL 105

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
           + + K+KLG G +G VY+GV  +     A +  K     +EEF  E  ++ +++H NLV+
Sbjct: 15  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 74
Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT+     +I E++   +L D++
Sbjct: 75  LLGVCTREPPFYIITEFMTYGNLLDYL 101

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
           + + K+KLG G +G VY+GV  +     A +  K     +EEF  E  ++ +++H NLV+
Sbjct: 16  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 75
Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT+     +I E++   +L D++
Sbjct: 76  LLGVCTREPPFYIITEFMTYGNLLDYL 102

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
           + + K+KLG G +G VY+GV  +     A +  K     +EEF  E  ++ +++H NLV+
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 78
Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT+     +I E++   +L D++
Sbjct: 79  LLGVCTREPPFYIITEFMTYGNLLDYL 105

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
           + + K+KLG G +G VY+GV  +     A +  K     +EEF  E  ++ +++H NLV+
Sbjct: 16  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 75
Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT+     +I E++   +L D++
Sbjct: 76  LLGVCTREPPFYIITEFMTYGNLLDYL 102

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
           + + K+KLG G +G VY+GV  +     A +  K     +EEF  E  ++ +++H NLV+
Sbjct: 27  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 86
Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT+     +I E++   +L D++
Sbjct: 87  LLGVCTREPPFYIITEFMTYGNLLDYL 113

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
           + + K+KLG G +G VY+GV  +     A +  K     +EEF  E  ++ +++H NLV+
Sbjct: 12  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 71
Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L+G CT+     +I E++   +L D++
Sbjct: 72  LLGVCTREPPFYIITEFMTYGNLLDYL 98

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 48/83 (57%)
Query: 509 KNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGC 568
           K+KLG G +G VY+GV  +     A +  K     +EEF  E  ++ +++H NLV+L+G 
Sbjct: 264 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 569 CTQRDERMLIYEYLPNKSLNDFI 591
           CT+     +I E++   +L D++
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYL 346

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 510 NKLGEGGFGPV----YKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
            +LG+G FG V    Y  +    G+ +A K+L  S+ + + +FE E+ ++  LQH N+VK
Sbjct: 47  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 565 LIGCCTQRDER--MLIYEYLPNKSLNDFI 591
             G C     R   LI EYLP  SL D++
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 135

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 510 NKLGEGGFGPV----YKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
            +LG+G FG V    Y  +    G+ +A K+L  S+ + + +FE E+ ++  LQH N+VK
Sbjct: 23  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 565 LIGCCTQRDER--MLIYEYLPNKSLNDFI 591
             G C     R   LI EYLP  SL D++
Sbjct: 83  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 111

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 510 NKLGEGGFGPV----YKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
            +LG+G FG V    Y  +    G+ +A K+L  S+ + + +FE E+ ++  LQH N+VK
Sbjct: 19  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 565 LIGCCTQRDER--MLIYEYLPNKSLNDFI 591
             G C     R   LI EYLP  SL D++
Sbjct: 79  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 107

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 510 NKLGEGGFGPV----YKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
            +LG+G FG V    Y  +    G+ +A K+L  S+ + + +FE E+ ++  LQH N+VK
Sbjct: 20  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 565 LIGCCTQRDER--MLIYEYLPNKSLNDFI 591
             G C     R   LI EYLP  SL D++
Sbjct: 80  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 108

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 510 NKLGEGGFGPV----YKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
            +LG+G FG V    Y  +    G+ +A K+L  S+ + + +FE E+ ++  LQH N+VK
Sbjct: 21  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 565 LIGCCTQRDER--MLIYEYLPNKSLNDFI 591
             G C     R   LI EYLP  SL D++
Sbjct: 81  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 109

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 510 NKLGEGGFGPV----YKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
            +LG+G FG V    Y  +    G+ +A K+L  S+ + + +FE E+ ++  LQH N+VK
Sbjct: 22  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 565 LIGCCTQRDER--MLIYEYLPNKSLNDFI 591
             G C     R   LI EYLP  SL D++
Sbjct: 82  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 110

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 510 NKLGEGGFGPV----YKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
            +LG+G FG V    Y  +    G+ +A K+L  S+ + + +FE E+ ++  LQH N+VK
Sbjct: 15  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 565 LIGCCTQRDER--MLIYEYLPNKSLNDFI 591
             G C     R   LI EYLP  SL D++
Sbjct: 75  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 103

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 510 NKLGEGGFGPV----YKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
            +LG+G FG V    Y  +    G+ +A K+L  S+ + + +FE E+ ++  LQH N+VK
Sbjct: 14  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 565 LIGCCTQRDER--MLIYEYLPNKSLNDFI 591
             G C     R   LI EYLP  SL D++
Sbjct: 74  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 102

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 510 NKLGEGGFGPV----YKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
            +LG+G FG V    Y  +    G+ +A K+L  S+ + + +FE E+ ++  LQH N+VK
Sbjct: 19  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 565 LIGCCTQRDER--MLIYEYLPNKSLNDFI 591
             G C     R   LI EYLP  SL D++
Sbjct: 79  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 107

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 510 NKLGEGGFGPV----YKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
            +LG+G FG V    Y  +    G+ +A K+L  S+ + + +FE E+ ++  LQH N+VK
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 565 LIGCCTQRDER--MLIYEYLPNKSLNDFI 591
             G C     R   LI EYLP  SL D++
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 510 NKLGEGGFGPV----YKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
            +LG+G FG V    Y  +    G+ +A K+L  S+ + + +FE E+ ++  LQH N+VK
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 565 LIGCCTQRDER--MLIYEYLPNKSLNDFI 591
             G C     R   LI EYLP  SL D++
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 510 NKLGEGGFGPV----YKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
            +LG+G FG V    Y  +    G+ +A K+L  S+ + + +FE E+ ++  LQH N+VK
Sbjct: 17  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 565 LIGCCTQRDER--MLIYEYLPNKSLNDFI 591
             G C     R   LI EYLP  SL D++
Sbjct: 77  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 105

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 510 NKLGEGGFGPV----YKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
            +LG+G FG V    Y  +    G+ +A K+L  S+ + + +FE E+ ++  LQH N+VK
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 565 LIGCCTQRDER--MLIYEYLPNKSLNDFI 591
             G C     R   LI EYLP  SL D++
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 510 NKLGEGGFGPV----YKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
            +LG+G FG V    Y  +    G+ +A K+L  S+ + + +FE E+ ++  LQH N+VK
Sbjct: 34  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 565 LIGCCTQRDER--MLIYEYLPNKSLNDFI 591
             G C     R   LI EYLP  SL D++
Sbjct: 94  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 122

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 510 NKLGEGGFGPV----YKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK 564
            +LG+G FG V    Y  +    G+ +A K+L  S+ + + +FE E+ ++  LQH N+VK
Sbjct: 34  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 565 LIGCCTQRDER--MLIYEYLPNKSLNDFI 591
             G C     R   LI EYLP  SL D++
Sbjct: 94  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 122

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 509 KNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNL 562
           K +LGEG FG V+           +   +A K L   +    ++F+ E  L+  LQH ++
Sbjct: 20  KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 563 VKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           VK  G C   D  ++++EY+ +  LN F+
Sbjct: 80  VKFYGVCGDGDPLIMVFEYMKHGDLNKFL 108

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 511 KLGEGGFGPV----YKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKL 565
           +LG+G FG V    Y  +    G+ +A K+L  S+ + + +FE E+ ++  LQH N+VK 
Sbjct: 20  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 566 IGCCTQRDER--MLIYEYLPNKSLNDFI 591
            G C     R   LI E+LP  SL +++
Sbjct: 80  KGVCYSAGRRNLKLIMEFLPYGSLREYL 107

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 53/86 (61%), Gaps = 7/86 (8%)
Query: 512 LGEGGFGPVYKGVLI-EGQ----EIAAKRLSKSSG-QGMEEFENEVLLIAKLQHRNLVKL 565
           LG G FG VYKG+ + EG+     +A K L++++G +   EF +E L++A + H +LV+L
Sbjct: 46  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 566 IGCCTQRDERMLIYEYLPNKSLNDFI 591
           +G C     + L+ + +P+  L +++
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYV 130

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 53/86 (61%), Gaps = 7/86 (8%)
Query: 512 LGEGGFGPVYKGVLI-EGQ----EIAAKRLSKSSG-QGMEEFENEVLLIAKLQHRNLVKL 565
           LG G FG VYKG+ + EG+     +A K L++++G +   EF +E L++A + H +LV+L
Sbjct: 23  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 566 IGCCTQRDERMLIYEYLPNKSLNDFI 591
           +G C     + L+ + +P+  L +++
Sbjct: 83  LGVCLSPTIQ-LVTQLMPHGCLLEYV 107

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 12/105 (11%)
Query: 492 PIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEG---QEIAAKRLSK-SSGQGMEEF 547
           P+ DW  I      F D   +GEG FG V K  + +     + A KR+ + +S     +F
Sbjct: 17  PVLDWNDI-----KFQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDF 69
Query: 548 ENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
             E+ ++ KL  H N++ L+G C  R    L  EY P+ +L DF+
Sbjct: 70  AGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 114

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 12/105 (11%)
Query: 492 PIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEG---QEIAAKRLSK-SSGQGMEEF 547
           P+ DW  I      F D   +GEG FG V K  + +     + A KR+ + +S     +F
Sbjct: 20  PVLDWNDI-----KFQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDF 72
Query: 548 ENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
             E+ ++ KL  H N++ L+G C  R    L  EY P+ +L DF+
Sbjct: 73  AGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 117

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 12/105 (11%)
Query: 492 PIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEG---QEIAAKRLSK-SSGQGMEEF 547
           P+ DW  I      F D   +GEG FG V K  + +     + A KR+ + +S     +F
Sbjct: 10  PVLDWNDI-----KFQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDF 62
Query: 548 ENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
             E+ ++ KL  H N++ L+G C  R    L  EY P+ +L DF+
Sbjct: 63  AGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 107

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 502 ATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQ 558
           + ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           H N+VKL+      ++  L++E+L ++ L DF+
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFM 92

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
            +LG G FG V+ G      ++A K L K     ++ F  E  L+  LQH  LV+L    
Sbjct: 19  KRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 570 TQRDERMLIYEYLPNKSLNDFI 591
           T+ +   +I EY+   SL DF+
Sbjct: 78  TREEPIYIITEYMAKGSLLDFL 99

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
            KLG G FG V+ G      ++A K L K     ++ F  E  L+  LQH  LV+L    
Sbjct: 18  KKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 570 TQRDERMLIYEYLPNKSLNDFI 591
           T+ +   +I E++   SL DF+
Sbjct: 77  TKEEPIYIITEFMAKGSLLDFL 98

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
            ++G G FG V+ G  +   ++A K + +      E+F  E  ++ KL H  LV+L G C
Sbjct: 13  QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 570 TQRDERMLIYEYLPNKSLNDFI 591
            ++    L++E++ +  L+D++
Sbjct: 72  LEQAPICLVFEFMEHGCLSDYL 93

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
            ++G G FG V+ G  +   ++A K + +      E+F  E  ++ KL H  LV+L G C
Sbjct: 16  QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 570 TQRDERMLIYEYLPNKSLNDFI 591
            ++    L++E++ +  L+D++
Sbjct: 75  LEQAPICLVFEFMEHGCLSDYL 96

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
            ++G G FG V+ G  +   ++A K + +      E+F  E  ++ KL H  LV+L G C
Sbjct: 11  QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 570 TQRDERMLIYEYLPNKSLNDFI 591
            ++    L++E++ +  L+D++
Sbjct: 70  LEQAPICLVFEFMEHGCLSDYL 91

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E      +LG G FG V+ G      ++A K L + S    + F  E  L+ +LQH+ LV
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 71
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +L    TQ +   +I EY+ N SL DF+
Sbjct: 72  RLYAVVTQ-EPIYIITEYMENGSLVDFL 98

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E      +LG G FG V+ G      ++A K L + S    + F  E  L+ +LQH+ LV
Sbjct: 15  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 73
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +L    TQ +   +I EY+ N SL DF+
Sbjct: 74  RLYAVVTQ-EPIYIITEYMENGSLVDFL 100

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E      +LG G FG V+ G      ++A K L + S    + F  E  L+ +LQH+ LV
Sbjct: 14  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 72
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +L    TQ +   +I EY+ N SL DF+
Sbjct: 73  RLYAVVTQ-EPIYIITEYMENGSLVDFL 99

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 500 ANATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAK 556
           A + + +    KLGEG +G VYK +  +  + +A KR+  +   +G+      EV L+ +
Sbjct: 30  ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKE 89
Query: 557 LQHRNLVKLIGCCTQRDERMLIYEYLPN 584
           LQHRN+++L           LI+EY  N
Sbjct: 90  LQHRNIIELKSVIHHNHRLHLIFEYAEN 117

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
            ++G G FG V+ G  +   ++A K + +      E+F  E  ++ KL H  LV+L G C
Sbjct: 13  QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 570 TQRDERMLIYEYLPNKSLNDFI 591
            ++    L++E++ +  L+D++
Sbjct: 72  LEQAPICLVFEFMEHGCLSDYL 93

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E      +LG G FG V+ G      ++A K L + S    + F  E  L+ +LQH+ LV
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 71
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +L    TQ +   +I EY+ N SL DF+
Sbjct: 72  RLYAVVTQ-EPIYIITEYMENGSLVDFL 98

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 505 NFSDKNKLGEGGFGPVYK----GVLI--EGQEIAAKRLSKSSGQGME-EFENEVLLIAKL 557
           N      +GEG FG V++    G+L       +A K L + +   M+ +F+ E  L+A+ 
Sbjct: 48  NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF 107
Query: 558 QHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
            + N+VKL+G C       L++EY+    LN+F+
Sbjct: 108 DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFL 141

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E      +LG G FG V+ G      ++A K L + S    + F  E  L+ +LQH+ LV
Sbjct: 19  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 77
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +L    TQ +   +I EY+ N SL DF+
Sbjct: 78  RLYAVVTQ-EPIYIITEYMENGSLVDFL 104

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E      +LG G FG V+ G      ++A K L + S    + F  E  L+ +LQH+ LV
Sbjct: 18  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 76
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +L    TQ +   +I EY+ N SL DF+
Sbjct: 77  RLYAVVTQ-EPIYIITEYMENGSLVDFL 103

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 509 KNKLGEGGFGPVYKGVLIEGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLI 566
           K K+G G FG V++     G ++A K L +     + + EF  EV ++ +L+H N+V  +
Sbjct: 42  KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 567 GCCTQRDERMLIYEYLPNKSL 587
           G  TQ     ++ EYL   SL
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSL 121

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E      +LG G FG V+ G      ++A K L + S    + F  E  L+ +LQH+ LV
Sbjct: 22  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 80
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +L    TQ +   +I EY+ N SL DF+
Sbjct: 81  RLYAVVTQ-EPIYIITEYMENGSLVDFL 107

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E      +LG G FG V+ G      ++A K L + S    + F  E  L+ +LQH+ LV
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 71
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +L    TQ +   +I EY+ N SL DF+
Sbjct: 72  RLYAVVTQ-EPIYIITEYMENGSLVDFL 98

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E      +LG G FG V+ G      ++A K L + S    + F  E  L+ +LQH+ LV
Sbjct: 23  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 81
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +L    TQ +   +I EY+ N SL DF+
Sbjct: 82  RLYAVVTQ-EPIYIITEYMENGSLVDFL 108

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 509 KNKLGEGGFGPVYKGVLIEGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLI 566
           K K+G G FG V++     G ++A K L +     + + EF  EV ++ +L+H N+V  +
Sbjct: 42  KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 567 GCCTQRDERMLIYEYLPNKSL 587
           G  TQ     ++ EYL   SL
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSL 121

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E      +LG G FG V+ G      ++A K L + S    + F  E  L+ +LQH+ LV
Sbjct: 8   ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 66
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +L    TQ +   +I EY+ N SL DF+
Sbjct: 67  RLYAVVTQ-EPIYIITEYMENGSLVDFL 93

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E      +LG G FG V+ G      ++A K L + S    + F  E  L+ +LQH+ LV
Sbjct: 9   ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 67
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +L    TQ +   +I EY+ N SL DF+
Sbjct: 68  RLYAVVTQ-EPIYIITEYMENGSLVDFL 94

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 502 ATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQ 558
           + ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           H N+VKL+      ++  L++E+L +  L DF+
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFM 95

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E      +LG G FG V+ G      ++A K L + S    + F  E  L+ +LQH+ LV
Sbjct: 19  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 77
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +L    TQ +   +I EY+ N SL DF+
Sbjct: 78  RLYAVVTQ-EPIYIITEYMENGSLVDFL 104

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
            +LG G FG V+ G      ++A K L + S    + F  E  L+ +LQH+ LV+L    
Sbjct: 27  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 570 TQRDERMLIYEYLPNKSLNDFI 591
           TQ +   +I EY+ N SL DF+
Sbjct: 86  TQ-EPIYIITEYMENGSLVDFL 106

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 502 ATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQ 558
           + ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L 
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           H N+VKL+      ++  L++E+L +  L DF+
Sbjct: 63  HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFM 94

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 506 FSDKNKLGEGGFGPVYKGVLIEGQEIAA-KRLSKSSGQGMEEFEN---EVLLIAKLQHRN 561
           FSD  ++G G FG VY    +   E+ A K++S S  Q  E++++   EV  + KL+H N
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 562 LVKLIGCCTQRDERMLIYEY 581
            ++  GC  +     L+ EY
Sbjct: 77  TIQYRGCYLREHTAWLVMEY 96

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 506 FSDKNKLGEGGFGPVYKGVLIEGQEIAA-KRLSKSSGQGMEEFEN---EVLLIAKLQHRN 561
           FSD  ++G G FG VY    +   E+ A K++S S  Q  E++++   EV  + KL+H N
Sbjct: 56  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 562 LVKLIGCCTQRDERMLIYEY 581
            ++  GC  +     L+ EY
Sbjct: 116 TIQYRGCYLREHTAWLVMEY 135

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
            ++G G FG V+ G  +   ++A K + + S    ++F  E  ++ KL H  LV+L G C
Sbjct: 33  QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 570 TQRDERMLIYEYLPNKSLNDFI 591
            ++    L++E++ +  L+D++
Sbjct: 92  LEQAPICLVFEFMEHGCLSDYL 113

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 10/83 (12%)
Query: 509 KNKLGEGGFGPVYKGVLIEGQEIAAKR---LSKSSGQ-----GMEEFENEVLLIAKLQHR 560
           + ++G+GGFG V+KG L++ + + A +   L  S G+       +EF+ EV +++ L H 
Sbjct: 24  EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 561 NLVKLIGCCTQRDERMLIYEYLP 583
           N+VKL G     +   ++ E++P
Sbjct: 84  NIVKLYGL--MHNPPRMVMEFVP 104

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 10/83 (12%)
Query: 509 KNKLGEGGFGPVYKGVLIEGQEIAAKR---LSKSSGQ-----GMEEFENEVLLIAKLQHR 560
           + ++G+GGFG V+KG L++ + + A +   L  S G+       +EF+ EV +++ L H 
Sbjct: 24  EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 561 NLVKLIGCCTQRDERMLIYEYLP 583
           N+VKL G     +   ++ E++P
Sbjct: 84  NIVKLYGL--MHNPPRMVMEFVP 104

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 10/83 (12%)
Query: 509 KNKLGEGGFGPVYKGVLIEGQEIAAKR---LSKSSGQ-----GMEEFENEVLLIAKLQHR 560
           + ++G+GGFG V+KG L++ + + A +   L  S G+       +EF+ EV +++ L H 
Sbjct: 24  EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 561 NLVKLIGCCTQRDERMLIYEYLP 583
           N+VKL G     +   ++ E++P
Sbjct: 84  NIVKLYGL--MHNPPRMVMEFVP 104

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQ-------EIAAKRLSK-SSGQGMEEFENEVLLIA 555
           +N +    LG G FG VY+G  + G        ++A K L +  S Q   +F  E L+I+
Sbjct: 31  KNITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 89
Query: 556 KLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           KL H+N+V+ IG   Q   R ++ E +    L  F+
Sbjct: 90  KLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 125

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVL------IEGQEIAAKRLSK-SSGQGMEEFENEVLLIAK 556
           +N +    LG G FG VY+G +          ++A K L +  S Q   +F  E L+I+K
Sbjct: 45  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 557 LQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L H+N+V+ IG   Q   R ++ E +    L  F+
Sbjct: 105 LNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 139

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 502 ATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQ 558
           + ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           H N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 92

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 502 ATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQ 558
           + ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L 
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           H N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 63  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 94

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 502 ATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQ 558
           + ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           H N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 95

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 502 ATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQ 558
           + ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L 
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           H N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 63  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 94

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 502 ATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQ 558
           + ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L 
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           H N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 62  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 93

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 502 ATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQ 558
           + ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L 
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           H N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 63  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 94

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 502 ATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQ 558
           + ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           H N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 92

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 504 ENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQHR 560
           ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 561 NLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 92

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 504 ENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQHR 560
           ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 561 NLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 92

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
            ++G G FG V+ G  +   ++A K + +      E+F  E  ++ KL H  LV+L G C
Sbjct: 14  QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 570 TQRDERMLIYEYLPNKSLNDFI 591
            ++    L+ E++ +  L+D++
Sbjct: 73  LEQAPICLVTEFMEHGCLSDYL 94

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 504 ENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQHR 560
           ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 561 NLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 91

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 502 ATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQ 558
           + ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           H N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 95

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 504 ENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQHR 560
           ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 561 NLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 91

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 502 ATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQ 558
           + ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           H N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 92

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 502 ATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQ 558
           + ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L 
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           H N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 62  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 93

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
            +LG G FG V  G    GQ   A ++ K      +EF  E  ++  L H  LV+L G C
Sbjct: 30  KELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 570 TQRDERMLIYEYLPNKSLNDFI 591
           T++    +I EY+ N  L +++
Sbjct: 89  TKQRPIFIITEYMANGCLLNYL 110

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 502 ATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQ 558
           + ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L 
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           H N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 62  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 93

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 502 ATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQ 558
           + ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L 
Sbjct: 5   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           H N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 65  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 96

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 504 ENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQHR 560
           ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L H 
Sbjct: 7   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 561 NLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 67  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 96

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
            +LG G FG V  G    GQ   A ++ K      +EF  E  ++  L H  LV+L G C
Sbjct: 15  KELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 570 TQRDERMLIYEYLPNKSLNDFI 591
           T++    +I EY+ N  L +++
Sbjct: 74  TKQRPIFIITEYMANGCLLNYL 95

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 502 ATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQ 558
           + ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           H N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFM 95

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 504 ENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQHR 560
           ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 561 NLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 92

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 504 ENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQHR 560
           ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 561 NLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 92

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
            +LG G FG V  G    GQ   A ++ K      +EF  E  ++  L H  LV+L G C
Sbjct: 14  KELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 570 TQRDERMLIYEYLPNKSLNDFI 591
           T++    +I EY+ N  L +++
Sbjct: 73  TKQRPIFIITEYMANGCLLNYL 94

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 502 ATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQ 558
           + ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           H N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 92

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
            +LG G FG V  G    GQ   A ++ K      +EF  E  ++  L H  LV+L G C
Sbjct: 15  KELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 570 TQRDERMLIYEYLPNKSLNDFI 591
           T++    +I EY+ N  L +++
Sbjct: 74  TKQRPIFIITEYMANGCLLNYL 95

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
            +LG G FG V  G    GQ   A ++ K      +EF  E  ++  L H  LV+L G C
Sbjct: 21  KELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 570 TQRDERMLIYEYLPNKSLNDFI 591
           T++    +I EY+ N  L +++
Sbjct: 80  TKQRPIFIITEYMANGCLLNYL 101

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
            +LG G FG V  G    GQ   A ++ K      +EF  E  ++  L H  LV+L G C
Sbjct: 30  KELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 570 TQRDERMLIYEYLPNKSLNDFI 591
           T++    +I EY+ N  L +++
Sbjct: 89  TKQRPIFIITEYMANGCLLNYL 110

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 504 ENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQHR 560
           ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 561 NLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 91

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 504 ENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQHR 560
           ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 561 NLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 91

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 504 ENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQHR 560
           ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L H 
Sbjct: 10  ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 561 NLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 70  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 99

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 504 ENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQHR 560
           ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L H 
Sbjct: 10  ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 561 NLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 70  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 99

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
            +LG G FG V  G    GQ   A ++ K      +EF  E  ++  L H  LV+L G C
Sbjct: 10  KELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 570 TQRDERMLIYEYLPNKSLNDFI 591
           T++    +I EY+ N  L +++
Sbjct: 69  TKQRPIFIITEYMANGCLLNYL 90

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 504 ENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQHR 560
           ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L H 
Sbjct: 4   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 561 NLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 64  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 93

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 512 LGEGGFGPVYKGVLIEGQEIAAKRLSKSS----GQGMEEFENEVLLIAKLQHRNLVKLIG 567
           +G GGFG VY+   I G E+A K           Q +E    E  L A L+H N++ L G
Sbjct: 15  IGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 568 CCTQRDERMLIYEYLPNKSLNDFIFG 593
            C +     L+ E+     LN  + G
Sbjct: 74  VCLKEPNLCLVMEFARGGPLNRVLSG 99

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 512 LGEGGFGPVYKGVLI-EGQEIAA----KRLSKSSG-QGMEEFENEVLLIAKLQHRNLVKL 565
           LG G FG V+KGV I EG+ I      K +   SG Q  +   + +L I  L H ++V+L
Sbjct: 39  LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 566 IGCCTQRDERMLIYEYLPNKSLNDFI 591
           +G C     + L+ +YLP  SL D +
Sbjct: 99  LGLCPGSSLQ-LVTQYLPLGSLLDHV 123

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 512 LGEGGFGPVYKGVLI-EGQEIAA----KRLSKSSG-QGMEEFENEVLLIAKLQHRNLVKL 565
           LG G FG V+KGV I EG+ I      K +   SG Q  +   + +L I  L H ++V+L
Sbjct: 21  LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 566 IGCCTQRDERMLIYEYLPNKSLNDFI 591
           +G C     + L+ +YLP  SL D +
Sbjct: 81  LGLCPGSSLQ-LVTQYLPLGSLLDHV 105

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 502 ATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQ 558
           + ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 559 HRNLVKLIGCCTQRDERMLIYEYL 582
           H N+VKL+      ++  L++E+L
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFL 87

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 502 ATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQ 558
           + ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L 
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 559 HRNLVKLIGCCTQRDERMLIYEYL 582
           H N+VKL+      ++  L++E+L
Sbjct: 62  HPNIVKLLDVIHTENKLYLVFEFL 85

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 14/91 (15%)
Query: 512 LGEGGFG--------PVYKGVLIEGQEIAAKRLSKSSGQGMEE-FENEVLLIAKLQHRNL 562
           LGEG FG        P   G    G+ +A K L +  G  +   ++ E+ ++  L H ++
Sbjct: 17  LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 563 VKLIGCCTQRDER--MLIYEYLPNKSLNDFI 591
           VK  GCC  + E+   L+ EY+P  SL D++
Sbjct: 74  VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL 104

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 512 LGEGGFGPVYKGVLIE----GQ----EIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           LG+G F  ++KGV  E    GQ    E+  K L K+     E F     +++KL H++LV
Sbjct: 16  LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
              G C   DE +L+ E++   SL+ ++
Sbjct: 76  LNYGVCVCGDENILVQEFVKFGSLDTYL 103

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVL------IEGQEIAAKRLSK-SSGQGMEEFENEVLLIAK 556
           +N +    LG G FG VY+G +          ++A K L +  S Q   +F  E L+I+K
Sbjct: 31  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 557 LQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
             H+N+V+ IG   Q   R ++ E +    L  F+
Sbjct: 91  FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 125

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVL------IEGQEIAAKRLSK-SSGQGMEEFENEVLLIAK 556
           +N +    LG G FG VY+G +          ++A K L +  S Q   +F  E L+I+K
Sbjct: 31  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 557 LQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
             H+N+V+ IG   Q   R ++ E +    L  F+
Sbjct: 91  FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 125

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVL------IEGQEIAAKRLSK-SSGQGMEEFENEVLLIAK 556
           +N +    LG G FG VY+G +          ++A K L +  S Q   +F  E L+I+K
Sbjct: 22  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 81
Query: 557 LQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
             H+N+V+ IG   Q   R ++ E +    L  F+
Sbjct: 82  FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 116

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 14/91 (15%)
Query: 512 LGEGGFG--------PVYKGVLIEGQEIAAKRLSKSSGQGMEE-FENEVLLIAKLQHRNL 562
           LGEG FG        P   G    G+ +A K L +  G  +   ++ E+ ++  L H ++
Sbjct: 16  LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 563 VKLIGCCTQRDER--MLIYEYLPNKSLNDFI 591
           VK  GCC  + E+   L+ EY+P  SL D++
Sbjct: 73  VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL 103

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQ-------EIAAKRLSK-SSGQGMEEFENEVLLIA 555
           +N +    LG G FG VY+G  + G        ++A K L +  S Q   +F  E L+I+
Sbjct: 37  KNITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 95
Query: 556 KLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           K  H+N+V+ IG   Q   R ++ E +    L  F+
Sbjct: 96  KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 131

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVL------IEGQEIAAKRLSK-SSGQGMEEFENEVLLIAK 556
           +N +    LG G FG VY+G +          ++A K L +  S Q   +F  E L+I+K
Sbjct: 45  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 557 LQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
             H+N+V+ IG   Q   R ++ E +    L  F+
Sbjct: 105 FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL 139

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQ-------EIAAKRLSK-SSGQGMEEFENEVLLIA 555
           +N +    LG G FG VY+G  + G        ++A K L +  S Q   +F  E L+I+
Sbjct: 30  KNITLIRGLGHGAFGEVYEG-QVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 88
Query: 556 KLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           K  H+N+V+ IG   Q   R ++ E +    L  F+
Sbjct: 89  KFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL 124

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVL------IEGQEIAAKRLSK-SSGQGMEEFENEVLLIAK 556
           +N +    LG G FG VY+G +          ++A K L +  S Q   +F  E L+I+K
Sbjct: 30  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 557 LQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
             H+N+V+ IG   Q   R ++ E +    L  F+
Sbjct: 90  FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 124

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQ-------EIAAKRLSK-SSGQGMEEFENEVLLIA 555
           +N +    LG G FG VY+G  + G        ++A K L +  S Q   +F  E L+I+
Sbjct: 47  KNITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 105
Query: 556 KLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           K  H+N+V+ IG   Q   R ++ E +    L  F+
Sbjct: 106 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 141

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQ-------EIAAKRLSK-SSGQGMEEFENEVLLIA 555
           +N +    LG G FG VY+G  + G        ++A K L +  S Q   +F  E L+I+
Sbjct: 48  KNITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 106
Query: 556 KLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           K  H+N+V+ IG   Q   R ++ E +    L  F+
Sbjct: 107 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 142

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQ-------EIAAKRLSK-SSGQGMEEFENEVLLIA 555
           +N +    LG G FG VY+G  + G        ++A K L +  S Q   +F  E L+I+
Sbjct: 71  KNITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 129
Query: 556 KLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           K  H+N+V+ IG   Q   R ++ E +    L  F+
Sbjct: 130 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 165

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQ-------EIAAKRLSK-SSGQGMEEFENEVLLIA 555
           +N +    LG G FG VY+G  + G        ++A K L +  S Q   +F  E L+I+
Sbjct: 57  KNITLIRGLGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIIS 115
Query: 556 KLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           K  H+N+V+ IG   Q   R ++ E +    L  F+
Sbjct: 116 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 151

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 512 LGEGGFGPVYKGVLIEGQ-----EIAAKRLSKSSGQGME-EFENEVLLIAKLQHRNLVKL 565
           +G G FG VYKG+L          +A K L     +    +F  E  ++ +  H N+++L
Sbjct: 52  IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 566 IGCCTQRDERMLIYEYLPNKSLNDFI 591
            G  ++    M+I EY+ N +L+ F+
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFL 137

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVL------IEGQEIAAKRLSKS-SGQGMEEFENEVLLIAK 556
           +N +    LG G FG VY+G +          ++A K L +  S Q   +F  E L+I+K
Sbjct: 45  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISK 104
Query: 557 LQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
             H+N+V+ IG   Q   R ++ E +    L  F+
Sbjct: 105 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 139

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 504 ENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQHR 560
           ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 561 NLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           N+VKL+      ++  L++E++ ++ L  F+
Sbjct: 62  NIVKLLDVIHTENKLYLVFEHV-HQDLKTFM 91

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 502 ATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQ 558
           + ENF    K+GEG +G VYK    + G+ +A K++   +  +G+      E+ L+ +L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           H N+VKL+      ++  L++E++ ++ L  F+
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFM 95

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 512 LGEGGFGPVYKGVLIE----GQ----EIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           LG+G F  ++KGV  E    GQ    E+  K L K+     E F     +++KL H++LV
Sbjct: 16  LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
              G C   DE +L+ E++   SL+ ++
Sbjct: 76  LNYGVCFCGDENILVQEFVKFGSLDTYL 103

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 504 ENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQHR 560
           ENF    K+GEG +G VYK    + G+ +A  ++   +  +G+      E+ L+ +L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 561 NLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 92

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 504 ENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFE-NEVLLIAKLQHR 560
           ENF    K+GEG +G VYK    + G+ +A  ++   +  +G+      E+ L+ +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 561 NLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           N+VKL+      ++  L++E+L ++ L  F+
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM 91

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 486 EEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLSKSSGQGM 544
           +EE+   +   +++ +  + ++   K+G+G  G VY  + +  GQE+A ++++       
Sbjct: 2   DEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK 61
Query: 545 EEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           E   NE+L++ + ++ N+V  +      DE  ++ EYL   SL D +
Sbjct: 62  ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV 108

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 14/91 (15%)
Query: 512 LGEGGFG--------PVYKGVLIEGQEIAAKRLSKSSG-QGMEEFENEVLLIAKLQHRNL 562
           LGEG FG        P   G    G+ +A K L    G Q    ++ E+ ++  L H ++
Sbjct: 22  LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 563 VKLIGCCTQRDER--MLIYEYLPNKSLNDFI 591
           +K  GCC  + E+   L+ EY+P  SL D++
Sbjct: 79  IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL 109

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 14/91 (15%)
Query: 512 LGEGGFG--------PVYKGVLIEGQEIAAKRLSKSSG-QGMEEFENEVLLIAKLQHRNL 562
           LGEG FG        P   G    G+ +A K L    G Q    ++ E+ ++  L H ++
Sbjct: 22  LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 563 VKLIGCCTQRDER--MLIYEYLPNKSLNDFI 591
           +K  GCC  + E+   L+ EY+P  SL D++
Sbjct: 79  IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL 109

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 486 EEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLSKSSGQGM 544
           +EE+   +   +++ +  + ++   K+G+G  G VY  + +  GQE+A ++++       
Sbjct: 2   DEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK 61
Query: 545 EEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           E   NE+L++ + ++ N+V  +      DE  ++ EYL   SL D +
Sbjct: 62  ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV 108

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 512 LGEGGFGPVYK-GVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCT 570
           LG G FG V+K      G ++AAK +     +  EE +NE+ ++ +L H NL++L     
Sbjct: 97  LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE 156
Query: 571 QRDERMLIYEYLPNKSLNDFIFGFLY 596
            +++ +L+ EY+    L D I    Y
Sbjct: 157 SKNDIVLVMEYVDGGELFDRIIDESY 182

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 486 EEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLSKSSGQGM 544
           +EE+   +   +++ +  + ++   K+G+G  G VY  + +  GQE+A ++++       
Sbjct: 2   DEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK 61
Query: 545 EEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           E   NE+L++ + ++ N+V  +      DE  ++ EYL   SL D +
Sbjct: 62  ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV 108

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E+   + KLG+G FG V+ G       +A K L K      E F  E  ++ KL+H  LV
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLV 243
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFIFG 593
           +L    ++ +   ++ EY+   SL DF+ G
Sbjct: 244 QLYAVVSE-EPIYIVTEYMSKGSLLDFLKG 272

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E+   + KLG+G FG V+ G       +A K L K      E F  E  ++ KL+H  LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFIFG 593
           +L    ++ +   ++ EY+   SL DF+ G
Sbjct: 243 QLYAVVSE-EPIYIVTEYMSKGSLLDFLKG 271

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E+   + KLG G FG V+     +  ++A K + K     +E F  E  ++  LQH  LV
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 240
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           KL    T ++   +I E++   SL DF+
Sbjct: 241 KLHAVVT-KEPIYIITEFMAKGSLLDFL 267

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E+   + KLG+G FG V+ G       +A K L K      E F  E  ++ KL+H  LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFIFG 593
           +L    ++ +   ++ EY+   SL DF+ G
Sbjct: 243 QLYAVVSE-EPIYIVTEYMSKGSLLDFLKG 271

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 486 EEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLSKSSGQGM 544
           +EE+   +   +++ +  + ++   K+G+G  G VY  + +  GQE+A ++++       
Sbjct: 3   DEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK 62
Query: 545 EEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           E   NE+L++ + ++ N+V  +      DE  ++ EYL   SL D +
Sbjct: 63  ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV 109

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E+   + KLG+G FG V+ G       +A K L K      E F  E  ++ KL+H  LV
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFIFG 593
           +L    ++    ++I EY+   SL DF+ G
Sbjct: 77  QLYAVVSEEPIYIVI-EYMSKGSLLDFLKG 105

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E  +   +LG G FG V  G   +GQ   A ++ K      +EF  E   + KL H  LV
Sbjct: 8   EEITLLKELGSGQFGVVKLGKW-KGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLV 66
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           K  G C++     ++ EY+ N  L +++
Sbjct: 67  KFYGVCSKEYPIYIVTEYISNGCLLNYL 94

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E+   + KLG+G FG V+ G       +A K L K      E F  E  ++ KL+H  LV
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFIFG 593
           +L    ++    ++I EY+   SL DF+ G
Sbjct: 77  QLYAVVSEEPIYIVI-EYMSKGSLLDFLKG 105

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 511 KLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCT 570
           KLG+G FG V+ G       +A K L K      E F  E  ++ KL+H  LV+L    +
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 571 QRDERMLIYEYLPNKSLNDFIFG 593
           + +   ++ EY+   SL DF+ G
Sbjct: 333 E-EPIYIVTEYMSKGSLLDFLKG 354

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 499 IANATENFSD----KNKLGEGGFGPVYKGVL-IEGQEIAAKRLS--KSSGQGMEEFENEV 551
           + NA+  FSD    K +LG+G F  V + V    G E AAK ++  K S +  ++ E E 
Sbjct: 20  MMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREA 79
Query: 552 LLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSL-NDFIFGFLYTE 598
            +  KLQH N+V+L     +     L+++ +    L  D +    Y+E
Sbjct: 80  RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE 127

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E+   + KLG G FG V+     +  ++A K + K     +E F  E  ++  LQH  LV
Sbjct: 15  ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 73
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           KL    T ++   +I E++   SL DF+
Sbjct: 74  KLHAVVT-KEPIYIITEFMAKGSLLDFL 100

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E+   + KLG G FG V+     +  ++A K + K     +E F  E  ++  LQH  LV
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 246
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           KL    T ++   +I E++   SL DF+
Sbjct: 247 KLHAVVT-KEPIYIITEFMAKGSLLDFL 273

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E+   + KLG+G FG V+ G       +A K L K      E F  E  ++ KL+H  LV
Sbjct: 8   ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 66
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFIFG 593
           +L    ++ +   ++ EY+   SL DF+ G
Sbjct: 67  QLYAVVSE-EPIXIVTEYMSKGSLLDFLKG 95

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E+   + KLG+G FG V+ G       +A K L K      E F  E  ++ KL+H  LV
Sbjct: 7   ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 65
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFIFG 593
           +L    ++ +   ++ EY+   SL DF+ G
Sbjct: 66  QLYAVVSE-EPIYIVTEYMSKGSLLDFLKG 94

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E+   + KLG+G FG V+ G       +A K L K      E F  E  ++ KL+H  LV
Sbjct: 9   ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 67
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFIFG 593
           +L    ++ +   ++ EY+   SL DF+ G
Sbjct: 68  QLYAVVSE-EPIYIVTEYMSKGSLLDFLKG 96

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E+   + KLG+G FG V+ G       +A K L K      E F  E  ++ KL+H  LV
Sbjct: 11  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 69
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFIFG 593
           +L    ++ +   ++ EY+   SL DF+ G
Sbjct: 70  QLYAVVSE-EPIYIVTEYMSKGSLLDFLKG 98

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E+   + KLG+G FG V+ G       +A K L K      E F  E  ++ KL+H  LV
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFIFG 593
           +L    ++ +   ++ EY+   SL DF+ G
Sbjct: 77  QLYAVVSE-EPIYIVTEYMSKGSLLDFLKG 105

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E+   + KLG+G FG V+ G       +A K L K      E F  E  ++ KL+H  LV
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFIFG 593
           +L    ++ +   ++ EY+   SL DF+ G
Sbjct: 77  QLYAVVSE-EPIYIVTEYMSKGSLLDFLKG 105

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 497 MAIANATENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLSKSSGQGMEEFENEVLLIA 555
           +++ +  + ++   K+G+G  G VY  + +  GQE+A ++++       E   NE+L++ 
Sbjct: 14  VSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMR 73
Query: 556 KLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           + ++ N+V  +      DE  ++ EYL   SL D +
Sbjct: 74  ENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV 109

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	617
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	6e-47
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	2e-46
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	2e-45
3soc_A	322	Activin receptor type-2A; structural genomics cons	5e-26
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	9e-24
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	4e-19
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	8e-19
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-18
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-18
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	6e-18
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	9e-18
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-17
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	3e-17
4aoj_A	329	High affinity nerve growth factor receptor; transf	5e-17
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	6e-17
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	6e-17
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	8e-17
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	8e-17
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-16
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	3e-16
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	3e-16
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	3e-16
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	4e-16
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	4e-16
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	5e-16
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	9e-16
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	1e-15
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-15
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-15
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-15
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-15
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-15
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	3e-15
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	5e-15
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	7e-15
3pls_A	298	Macrophage-stimulating protein receptor; protein k	7e-15
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	9e-15
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	1e-14
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-14
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-14
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-14
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	1e-14
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	1e-14
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-14
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-14
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-14
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	4e-14
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	4e-14
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	4e-14
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	4e-14
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	4e-14
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	5e-14
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	5e-14
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	6e-14
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	7e-14
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	8e-14
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	1e-13
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-13
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-13
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-13
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-13
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-13
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-13
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-13
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	3e-13
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	3e-13
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	6e-13
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	7e-13
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	7e-13
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	9e-13
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-12
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-12
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-12
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	3e-12
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-12
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-12
1kj1_A	109	Lectin I, lecgna 1; BULB lectin, mannose, plant pr	3e-12
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	7e-12
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-11
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-11
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	8e-11
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	8e-11
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-10
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-10
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-10
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-10
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	3e-10
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-10
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	6e-10
2a19_B	284	Interferon-induced, double-stranded RNA-activated	7e-10
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	7e-10
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	8e-10
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-09
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	1e-09
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-09
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	1e-09
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-09
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-09
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-09
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-09
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-09
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	4e-09
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	4e-09
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	4e-09
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	6e-09
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	7e-09
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	7e-09
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	7e-09
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	7e-09
3bhy_A	283	Death-associated protein kinase 3; death associate	9e-09
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	9e-09
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	9e-09
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-08
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-08
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	1e-08
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-08
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-08
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	2e-08
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-08
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-08
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-08
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	4e-08
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	4e-08
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	4e-08
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	4e-08
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	5e-08
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	6e-08
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	6e-08
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	8e-08
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	9e-08
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	1e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-07
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	2e-07
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	4e-04
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-07
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-07
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	3e-07
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-07
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	7e-07
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	8e-07
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	7e-06
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	9e-07
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	1e-06
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	1e-06
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-06
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-06
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-06
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-06
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-06
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-06
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-06
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-06
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	3e-06
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	3e-06
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	4e-06
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	5e-06
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	6e-06
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	7e-06
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	1e-05
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-05
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-05
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	5e-05
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	5e-05
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	8e-05
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-04
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-04
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-04
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	3e-04
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	5e-04
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	6e-04
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	7e-04
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	9e-04

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  166 bits (423), Expect = 6e-47
 Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 11/133 (8%)

Query: 481 DRGNREEEMELPIFDWMAIANATENFSDK------NKLGEGGFGPVYKGVLIEGQEIAAK 534
           ++     +     F +  + N T NF ++      NK+GEGGFG VYKG +     +A K
Sbjct: 2   NKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVK 60

Query: 535 RLSK----SSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDF 590
           +L+     ++ +  ++F+ E+ ++AK QH NLV+L+G  +  D+  L+Y Y+PN SL D 
Sbjct: 61  KLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR 120

Query: 591 IFGFLYTEHFFWS 603
           +     T    W 
Sbjct: 121 LSCLDGTPPLSWH 133

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  165 bits (420), Expect = 2e-46
 Identities = 44/102 (43%), Positives = 62/102 (60%), Gaps = 1/102 (0%)

Query: 493 IFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGME-EFENEV 551
            F    +  A++NFS+KN LG GGFG VYKG L +G  +A KRL +   QG E +F+ EV
Sbjct: 19  RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEV 78

Query: 552 LLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFG 593
            +I+   HRNL++L G C    ER+L+Y Y+ N S+   +  
Sbjct: 79  EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE 120

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  162 bits (413), Expect = 2e-45
 Identities = 44/124 (35%), Positives = 71/124 (57%)

Query: 470 KTDGSSKLDYNDRGNREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQ 529
            +  ++ ++     +     E      + +  AT NF  K  +G G FG VYKGVL +G 
Sbjct: 5   YSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGA 64

Query: 530 EIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLND 589
           ++A KR +  S QG+EEFE E+  ++  +H +LV LIG C +R+E +LIY+Y+ N +L  
Sbjct: 65  KVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKR 124

Query: 590 FIFG 593
            ++G
Sbjct: 125 HLYG 128

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  107 bits (270), Expect = 5e-26
 Identities = 21/97 (21%), Positives = 39/97 (40%), Gaps = 6/97 (6%)

Query: 499 IANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQ 558
           +   +           G FG V+K   +  + +A K       Q  +  E EV  +  ++
Sbjct: 19  LYFQSMPLQLLEVKARGRFGCVWKAQ-LLNEYVAVKIFPIQDKQSWQ-NEYEVYSLPGMK 76

Query: 559 HRNLVKLIGCCTQRD----ERMLIYEYLPNKSLNDFI 591
           H N+++ IG   +      +  LI  +    SL+DF+
Sbjct: 77  HENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL 113

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  101 bits (254), Expect = 9e-24
 Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 10/124 (8%)

Query: 489 MELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFE 548
           ME    +        +N      +G G +G VYKG L + + +A K  S ++ Q     E
Sbjct: 1   MEAAASEPSL---DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFIN-E 55

Query: 549 NEVLLIAKLQHRNLVKLIGCCT-----QRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWS 603
             +  +  ++H N+ + I          R E +L+ EY PN SL  ++            
Sbjct: 56  KNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCR 115

Query: 604 FFFS 607
              S
Sbjct: 116 LAHS 119

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 86.6 bits (215), Expect = 4e-19
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 5/87 (5%)

Query: 509 KNKLGEGGFGPVYKGVLIEGQEIAAKRLSKS----SGQGMEEFENEVLLIAKLQHRNLVK 564
           +  +G GGFG VY+     G E+A K           Q +E    E  L A L+H N++ 
Sbjct: 12  EEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70

Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           L G C +     L+ E+     LN  +
Sbjct: 71  LRGVCLKEPNLCLVMEFARGGPLNRVL 97

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 86.6 bits (215), Expect = 8e-19
 Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 16/135 (11%)

Query: 462 KRRHRKQGKTDGSSKLDYNDRGNREEEMELPIFDWMAIANATENFSD---KNKLGEGGFG 518
           K  H     +D       N       + +    D   I      + D   K K+G G FG
Sbjct: 2   KHHHHHHPMSDYDIPTTENLYFQGAMDGD----DMD-I-----PWCDLNIKEKIGAGSFG 51

Query: 519 PVYKGVLIEGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERM 576
            V++     G ++A K L +     + + EF  EV ++ +L+H N+V  +G  TQ     
Sbjct: 52  TVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110

Query: 577 LIYEYLPNKSLNDFI 591
           ++ EYL   SL   +
Sbjct: 111 IVTEYLSRGSLYRLL 125

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 85.0 bits (211), Expect = 1e-18
 Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 8/94 (8%)

Query: 505 NFSD---KNKLGEGGFGPVYKGVLIEGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQH 559
           +F       KL E   G ++KG   +G +I  K L     S +   +F  E   +    H
Sbjct: 8   DFKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66

Query: 560 RNLVKLIGCCTQRDER--MLIYEYLPNKSLNDFI 591
            N++ ++G C         LI  ++P  SL + +
Sbjct: 67  PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVL 100

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 85.5 bits (212), Expect = 2e-18
 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 1/84 (1%)

Query: 509 KNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIG 567
              LG+G FG   K    E G+ +  K L +   +    F  EV ++  L+H N++K IG
Sbjct: 15  GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74

Query: 568 CCTQRDERMLIYEYLPNKSLNDFI 591
              +      I EY+   +L   I
Sbjct: 75  VLYKDKRLNFITEYIKGGTLRGII 98

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 84.3 bits (209), Expect = 6e-18
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 7/89 (7%)

Query: 509 KNKLGEGGFGPVYKGVLI-----EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
             +LG+G FG V            G+ +A K+L  S+ + + +FE E+ ++  LQH N+V
Sbjct: 46  LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 105

Query: 564 KLIGCCTQRDER--MLIYEYLPNKSLNDF 590
           K  G C     R   LI EYLP  SL D+
Sbjct: 106 KYKGVCYSAGRRNLKLIMEYLPYGSLRDY 134

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 83.1 bits (206), Expect = 9e-18
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 7/89 (7%)

Query: 509 KNKLGEGGFGPVYKGVLI-----EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
             +LG+G FG V            G+ +A K+L  S+ + + +FE E+ ++  LQH N+V
Sbjct: 15  LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 74

Query: 564 KLIGCCTQRDER--MLIYEYLPNKSLNDF 590
           K  G C     R   LI EYLP  SL D+
Sbjct: 75  KYKGVCYSAGRRNLKLIMEYLPYGSLRDY 103

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 82.4 bits (204), Expect = 2e-17
 Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 10/96 (10%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQG-------MEEFENEVLLIA 555
                + ++G+GGFG V+KG L++    +A K L     +G        +EF+ EV +++
Sbjct: 19  NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78

Query: 556 KLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
            L H N+VKL G         ++ E++P   L   +
Sbjct: 79  NLNHPNIVKLYGLMHN--PPRMVMEFVPCGDLYHRL 112

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 81.5 bits (202), Expect = 3e-17
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 6/88 (6%)

Query: 509 KNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNL 562
           K +LGEG FG V+           +   +A K L   +    ++F+ E  L+  LQH ++
Sbjct: 20  KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79

Query: 563 VKLIGCCTQRDERMLIYEYLPNKSLNDF 590
           VK  G C   D  ++++EY+ +  LN F
Sbjct: 80  VKFYGVCGDGDPLIMVFEYMKHGDLNKF 107

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 81.6 bits (202), Expect = 5e-17
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 6/88 (6%)

Query: 509 KNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNL 562
           K +LGEG FG V+           +   +A K L ++S    ++F+ E  L+  LQH+++
Sbjct: 46  KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 105

Query: 563 VKLIGCCTQRDERMLIYEYLPNKSLNDF 590
           V+  G CT+    ++++EY+ +  LN F
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRF 133

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 80.4 bits (199), Expect = 6e-17
 Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVL--------IEGQEIAAKRLSKSSGQGMEEFENEVLLIA 555
           E+      LG+G F  ++KGV         +   E+  K L K+     E F     +++
Sbjct: 8   EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMS 67

Query: 556 KLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDF 590
           KL H++LV   G C   DE +L+ E++   SL+ +
Sbjct: 68  KLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTY 102

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 81.2 bits (201), Expect = 6e-17
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 7/89 (7%)

Query: 509 KNKLGEGGFGPVYKGVLI-----EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
            ++LG+G FG V            G  +A K+L  S      +F+ E+ ++  L    +V
Sbjct: 28  ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIV 87

Query: 564 KLIGCCTQRDER--MLIYEYLPNKSLNDF 590
           K  G       +   L+ EYLP+  L DF
Sbjct: 88  KYRGVSYGPGRQSLRLVMEYLPSGCLRDF 116

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 80.5 bits (199), Expect = 8e-17
 Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 5/88 (5%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           +    +  +G G FG V K      +++A K++   S    + F  E+  ++++ H N+V
Sbjct: 8   KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIE--SESERKAFIVELRQLSRVNHPNIV 64

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           KL G C       L+ EY    SL + +
Sbjct: 65  KLYGACLN--PVCLVMEYAEGGSLYNVL 90

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 80.3 bits (199), Expect = 8e-17
 Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 7/89 (7%)

Query: 509 KNKLGEGGFGPVYKGVLI------EGQEIAAKRLSK-SSGQGMEEFENEVLLIAKLQHRN 561
             +LGE  FG VYKG L       + Q +A K L   + G   EEF +E +L A+LQH N
Sbjct: 14  MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPN 73

Query: 562 LVKLIGCCTQRDERMLIYEYLPNKSLNDF 590
           +V L+G  T+     +I+ Y  +  L++F
Sbjct: 74  VVCLLGVVTKDQPLSMIFSYCSHGDLHEF 102

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 79.7 bits (197), Expect = 2e-16
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 8/91 (8%)

Query: 509 KNKLGEGGFGPVYKGVLI-----EGQEIAAKRLSKSSG-QGMEEFENEVLLIAKLQHRNL 562
              LGEG FG V            G+ +A K L   +G Q    ++ E+ ++  L H ++
Sbjct: 36  IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95

Query: 563 VKLIGCCTQRDER--MLIYEYLPNKSLNDFI 591
           +K  GCC         L+ EY+P  SL D++
Sbjct: 96  IKYKGCCEDAGAASLQLVMEYVPLGSLRDYL 126

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 78.9 bits (195), Expect = 3e-16
 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 8/91 (8%)

Query: 509 KNKLGEGGFGPVYKGVLI-----EGQEIAAKRL-SKSSGQGMEEFENEVLLIAKLQHRNL 562
              LGEG FG V            G+++A K L  +S G  + + + E+ ++  L H N+
Sbjct: 26  IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 85

Query: 563 VKLIGCCTQRDER--MLIYEYLPNKSLNDFI 591
           VK  G CT+       LI E+LP+ SL +++
Sbjct: 86  VKYKGICTEDGGNGIKLIMEFLPSGSLKEYL 116

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 78.0 bits (193), Expect = 3e-16
 Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 1/82 (1%)

Query: 509 KNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGC 568
             ++G G FG V+ G  +   ++A K + +      E+F  E  ++ KL H  LV+L G 
Sbjct: 13  VQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 71

Query: 569 CTQRDERMLIYEYLPNKSLNDF 590
           C ++    L+ E++ +  L+D+
Sbjct: 72  CLEQAPICLVTEFMEHGCLSDY 93

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 79.3 bits (196), Expect = 3e-16
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 7/89 (7%)

Query: 509 KNKLGEGGFGPVYKGVLI------EGQEIAAKRL-SKSSGQGMEEFENEVLLIAKLQHRN 561
              +GEG FG V++              +A K L  ++S     +F+ E  L+A+  + N
Sbjct: 52  VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPN 111

Query: 562 LVKLIGCCTQRDERMLIYEYLPNKSLNDF 590
           +VKL+G C       L++EY+    LN+F
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEF 140

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 78.9 bits (195), Expect = 4e-16
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 7/89 (7%)

Query: 509 KNKLGEGGFGPVYKGVLI------EGQEIAAKRLSK-SSGQGMEEFENEVLLIAKLQHRN 561
              LG G FG VY+G +          ++A K L +  S Q   +F  E L+I+K  H+N
Sbjct: 35  IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 94

Query: 562 LVKLIGCCTQRDERMLIYEYLPNKSLNDF 590
           +V+ IG   Q   R ++ E +    L  F
Sbjct: 95  IVRCIGVSLQSLPRFILMELMAGGDLKSF 123

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 78.0 bits (193), Expect = 5e-16
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 7/94 (7%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVL--IEGQE----IAAKRL-SKSSGQGMEEFENEVLLIAK 556
           +N      LGEG FG V K     ++G+     +A K L   +S   + +  +E  ++ +
Sbjct: 23  KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82

Query: 557 LQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDF 590
           + H +++KL G C+Q    +LI EY    SL  F
Sbjct: 83  VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGF 116

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 77.8 bits (192), Expect = 9e-16
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 4/85 (4%)

Query: 509 KNKLGEGGFGPVYKGVLIEGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLI 566
              +G+G FG VY G      E+A + +     +   ++ F+ EV+   + +H N+V  +
Sbjct: 38  GELIGKGRFGQVYHGRW--HGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95

Query: 567 GCCTQRDERMLIYEYLPNKSLNDFI 591
           G C       +I      ++L   +
Sbjct: 96  GACMSPPHLAIITSLCKGRTLYSVV 120

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 78.2 bits (193), Expect = 1e-15
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 7/89 (7%)

Query: 509 KNKLGEGGFGPVYKGVLI------EGQEIAAKRLSK-SSGQGMEEFENEVLLIAKLQHRN 561
              LG G FG VY+G +          ++A K L +  S Q   +F  E L+I+K  H+N
Sbjct: 76  IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 135

Query: 562 LVKLIGCCTQRDERMLIYEYLPNKSLNDF 590
           +V+ IG   Q   R ++ E +    L  F
Sbjct: 136 IVRCIGVSLQSLPRFILLELMAGGDLKSF 164

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 76.9 bits (190), Expect = 1e-15
 Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 7/89 (7%)

Query: 509 KNKLGEGGFGPVYKGVLI------EGQEIAAKRLSK-SSGQGMEEFENEVLLIAKLQHRN 561
             +LG+G FG VY+GV            +A K +++ +S +   EF NE  ++ +    +
Sbjct: 30  SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 89

Query: 562 LVKLIGCCTQRDERMLIYEYLPNKSLNDF 590
           +V+L+G  +Q    ++I E +    L  +
Sbjct: 90  VVRLLGVVSQGQPTLVIMELMTRGDLKSY 118

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 76.5 bits (189), Expect = 1e-15
 Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 1/87 (1%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           ++ +   +LG G FG V  G      ++A K + K      +EF  E  ++  L H  LV
Sbjct: 24  KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLV 82

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDF 590
           +L G CT++    +I EY+ N  L ++
Sbjct: 83  QLYGVCTKQRPIFIITEYMANGCLLNY 109

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 76.9 bits (190), Expect = 2e-15
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 5/87 (5%)

Query: 509 KNKLGEGGFGPVYKGVLIEGQE---IAAKRL-SKSSGQGMEEFENEVLLIAKL-QHRNLV 563
           ++ +GEG FG V K  + +       A KR+   +S     +F  E+ ++ KL  H N++
Sbjct: 30  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDF 590
            L+G C  R    L  EY P+ +L DF
Sbjct: 90  NLLGACEHRGYLYLAIEYAPHGNLLDF 116

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 76.1 bits (188), Expect = 2e-15
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 1/87 (1%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E  +   +LG G FG V  G      ++A K + K      +EF  E   + KL H  LV
Sbjct: 8   EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLV 66

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDF 590
           K  G C++     ++ EY+ N  L ++
Sbjct: 67  KFYGVCSKEYPIYIVTEYISNGCLLNY 93

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 75.4 bits (186), Expect = 3e-15
 Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 5/90 (5%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRN 561
              +   ++G G FG VYKG      ++A K L+ +  + Q ++ F+NEV ++ K +H N
Sbjct: 24  GQITVGQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 81

Query: 562 LVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           ++  +G  T   +  ++ ++    SL   +
Sbjct: 82  ILLFMGYSTA-PQLAIVTQWCEGSSLYHHL 110

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 76.1 bits (188), Expect = 3e-15
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 7/88 (7%)

Query: 510 NKLGEGGFGPVYKGVLIEGQE-----IAAKRLSK-SSGQGMEEFENEVLLIAKLQHRNLV 563
             LG G FG VYKG+ I   E     +A K L + +S +  +E  +E  ++A + + ++ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +L+G C       LI + +P   L D++
Sbjct: 81  RLLGICLT-STVQLITQLMPFGCLLDYV 107

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 76.1 bits (188), Expect = 5e-15
 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 2/89 (2%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVL-IEGQEIAAKRL-SKSSGQGMEEFENEVLLIAKLQHRN 561
           E+     ++G G FG V+ G L  +   +A K            +F  E  ++ +  H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173

Query: 562 LVKLIGCCTQRDERMLIYEYLPNKSLNDF 590
           +V+LIG CTQ+    ++ E +       F
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTF 202

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 74.6 bits (184), Expect = 7e-15
 Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 6/88 (6%)

Query: 510 NKLGEGGFGPVYKGVLIEG----QEIAAKRLSK-SSGQGMEEFENEVLLIAKLQHRNLVK 564
             +G G FG VY G L++        A K L++ +    + +F  E +++    H N++ 
Sbjct: 31  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90

Query: 565 LIGCCTQRDE-RMLIYEYLPNKSLNDFI 591
           L+G C + +   +++  Y+ +  L +FI
Sbjct: 91  LLGICLRSEGSPLVVLPYMKHGDLRNFI 118

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 74.6 bits (184), Expect = 7e-15
 Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 14/111 (12%)

Query: 487 EEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQE----IAAKRLSK-SSG 541
           +++ +P  + +              +G+G FG VY G  I+  +     A K LS+ +  
Sbjct: 12  KDVLIP-HERVVT-------HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEM 63

Query: 542 QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDER-MLIYEYLPNKSLNDFI 591
           Q +E F  E LL+  L H N++ LIG     +    ++  Y+ +  L  FI
Sbjct: 64  QQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFI 114

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 74.6 bits (184), Expect = 9e-15
 Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 11/94 (11%)

Query: 509 KNKLGEGGFGPVYKGVLI----EGQEIAAKRLSK--SSGQGMEEFENEVLLIAKLQHRNL 562
              LGEG FG V +G L        ++A K +    SS + +EEF +E   +    H N+
Sbjct: 39  GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98

Query: 563 VKLIGCCTQRD-----ERMLIYEYLPNKSLNDFI 591
           ++L+G C +       + M+I  ++    L+ ++
Sbjct: 99  IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL 132

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 74.3 bits (183), Expect = 1e-14
 Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 7/89 (7%)

Query: 509 KNKLGEGGFGPVYKGVLI---EGQEI--AAKRLSKSSG-QGMEEFENEVLLIAKLQHRNL 562
              LG G FG V+KGV I   E  +I    K +   SG Q  +   + +L I  L H ++
Sbjct: 18  LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 77

Query: 563 VKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           V+L+G C       L+ +YLP  SL D +
Sbjct: 78  VRLLGLCPG-SSLQLVTQYLPLGSLLDHV 105

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 74.3 bits (183), Expect = 1e-14
 Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 12/95 (12%)

Query: 509 KNKLGEGGFGPVYKGVLI----EGQEIAAKRLSK--SSGQGMEEFENEVLLIAKLQHRNL 562
              LG+G FG V +  L        ++A K L     +   +EEF  E   + +  H ++
Sbjct: 28  GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHV 87

Query: 563 VKLIGCCTQRDER------MLIYEYLPNKSLNDFI 591
            KL+G   +   +      M+I  ++ +  L+ F+
Sbjct: 88  AKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFL 122

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 74.3 bits (183), Expect = 1e-14
 Identities = 30/140 (21%), Positives = 49/140 (35%), Gaps = 11/140 (7%)

Query: 459 YLWKRRHRKQGKTDGSSKLDYNDRGNREEEMELPIFDWMAIANATENFSDKNKLGEGGFG 518
           Y  + R+  Q +         ++     +  E             EN      LG G FG
Sbjct: 3   YKKQFRYESQLQM-VQVTGSSDNEYFYVDFREYEYDLKWEFPR--ENLEFGKVLGSGAFG 59

Query: 519 PVYKGVLI------EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCT 570
            V               ++A K L +       E   +E+ ++ +L  H N+V L+G CT
Sbjct: 60  KVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 119

Query: 571 QRDERMLIYEYLPNKSLNDF 590
                 LI+EY     L ++
Sbjct: 120 LSGPIYLIFEYCCYGDLLNY 139

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 74.2 bits (183), Expect = 1e-14
 Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 21/148 (14%)

Query: 456 GFVYLWKRRHRKQGKTDGSSKLDYNDRGNREEEMELPIFD-WMAIANATE----NFSDKN 510
           G  Y +K++ + Q +       + N      +  +LP  + W       E    N     
Sbjct: 1   GVDYKYKQKPKYQVRWKIIESYEGNSYTF-IDPTQLPYNEKW-------EFPRNNLQFGK 52

Query: 511 KLGEGGFGPVYKGVL--IEGQE----IAAKRL-SKSSGQGMEEFENEVLLIAKL-QHRNL 562
            LG G FG V +     +  ++    +A K L S +     E   +E+ +++ L QH N+
Sbjct: 53  TLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112

Query: 563 VKLIGCCTQRDERMLIYEYLPNKSLNDF 590
           V L+G CT     ++I EY     L +F
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNF 140

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 74.2 bits (183), Expect = 1e-14
 Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 10/97 (10%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLI--------EGQEIAAKRL-SKSSGQGMEEFENEVLLI 554
           +  +    LGEG FG V     +        E   +A K L   ++ + + +  +E+ ++
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94

Query: 555 AKL-QHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDF 590
             + +H+N++ L+G CTQ     +I EY    +L ++
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 131

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 74.7 bits (184), Expect = 1e-14
 Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 10/97 (10%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLI--------EGQEIAAKRL-SKSSGQGMEEFENEVLLI 554
           +  +    LGEG FG V     +        E   +A K L   ++ + + +  +E+ ++
Sbjct: 81  DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140

Query: 555 AKL-QHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDF 590
             + +H+N++ L+G CTQ     +I EY    +L ++
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 177

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 73.0 bits (180), Expect = 2e-14
 Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 4/83 (4%)

Query: 509 KNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGC 568
              +G+G FG V  G    G ++A K +   +    + F  E  ++ +L+H NLV+L+G 
Sbjct: 26  LQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGV 82

Query: 569 CTQRDER-MLIYEYLPNKSLNDF 590
             +      ++ EY+   SL D+
Sbjct: 83  IVEEKGGLYIVTEYMAKGSLVDY 105

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 74.0 bits (182), Expect = 2e-14
 Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 6/88 (6%)

Query: 510 NKLGEGGFGPVYKGVLIEG----QEIAAKRLSK-SSGQGMEEFENEVLLIAKLQHRNLVK 564
             +G G FG VY G L++        A K L++ +    + +F  E +++    H N++ 
Sbjct: 95  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154

Query: 565 LIGCCTQRDE-RMLIYEYLPNKSLNDFI 591
           L+G C + +   +++  Y+ +  L +FI
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFI 182

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 73.0 bits (180), Expect = 2e-14
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 2/83 (2%)

Query: 509 KNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIG 567
           K+KLG G +G VY+GV       +A K L K     +EEF  E  ++ +++H NLV+L+G
Sbjct: 18  KHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76

Query: 568 CCTQRDERMLIYEYLPNKSLNDF 590
            CT+     +I E++   +L D+
Sbjct: 77  VCTREPPFYIITEFMTYGNLLDY 99

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 73.1 bits (180), Expect = 4e-14
 Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 5/87 (5%)

Query: 509 KNKLGEGGFGPVYKGVLI----EGQEIAAKRL-SKSSGQGMEEFENEVLLIAKLQHRNLV 563
           +  +G G  G V  G L         +A K L +  + +   +F +E  ++ +  H N++
Sbjct: 54  EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDF 590
           +L G  T+    M++ EY+ N SL+ F
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTF 140

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 72.7 bits (179), Expect = 4e-14
 Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 7/88 (7%)

Query: 510 NKLGEGGFGPVYKGVLIEGQE-----IAAKRL-SKSSGQGMEEFENEVLLIAKLQHRNLV 563
             LG G FG VYKG+ I   E     +A K L   +S +  +E  +E  ++A + + ++ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +L+G C       LI + +P   L D++
Sbjct: 81  RLLGICLT-STVQLITQLMPFGCLLDYV 107

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 73.2 bits (180), Expect = 4e-14
 Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 10/92 (10%)

Query: 509 KNKLGEGGFGPVYKGVLI--------EGQEIAAKRL-SKSSGQGMEEFENEVLLIAKL-Q 558
              LGEG FG V     I           ++A K L S ++ + + +  +E+ ++  + +
Sbjct: 74  GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133

Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDF 590
           H+N++ L+G CTQ     +I EY    +L ++
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREY 165

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 72.7 bits (179), Expect = 4e-14
 Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 8/95 (8%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKS-SGQGMEEFENEVLLIAK 556
              S    LG G FG V +              +A K L  S      E   +E+ +++ 
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 557 L-QHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDF 590
           L  H N+V L+G CT     ++I EY     L +F
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNF 117

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 74.5 bits (183), Expect = 4e-14
 Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 8/134 (5%)

Query: 462 KRRHRKQGKTDGSSKLDYNDRGNREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVY 521
           +++  +      S   DY +  + E+   +P      I    E       +GEG FG V+
Sbjct: 350 EKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQR--ERIELGRCIGEGQFGDVH 407

Query: 522 KGVLI--EGQEI--AAKRL-SKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERM 576
           +G+ +  E   +  A K   + +S    E+F  E L + +  H ++VKLIG  T+ +   
Sbjct: 408 QGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVW 466

Query: 577 LIYEYLPNKSLNDF 590
           +I E      L  F
Sbjct: 467 IIMELCTLGELRSF 480

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 72.3 bits (178), Expect = 5e-14
 Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 9/91 (9%)

Query: 509 KNKLGEGGFGPVYKGVLI------EGQEIAAKRL-SKSSGQGMEEFENEVLLIAKL-QHR 560
              LG G FG V +            + +A K L   ++        +E+ ++  +  H 
Sbjct: 32  GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91

Query: 561 NLVKLIGCCTQRDE-RMLIYEYLPNKSLNDF 590
           N+V L+G CT+     M+I E+    +L+ +
Sbjct: 92  NVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 122

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 71.9 bits (177), Expect = 5e-14
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 509 KNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGC 568
             +LG G FG V+ G      ++A K L K      + F  E  L+ +LQH+ LV+L   
Sbjct: 18  VERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 76

Query: 569 CTQRDERMLIYEYLPNKSLNDF 590
            TQ +   +I EY+ N SL DF
Sbjct: 77  VTQ-EPIYIITEYMENGSLVDF 97

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 72.4 bits (178), Expect = 6e-14
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 6/88 (6%)

Query: 509 KNKLGEGGFGPVYKGVLIEGQE-----IAAKRLSK-SSGQGMEEFENEVLLIAKLQHRNL 562
           +  +G G FG VYKG+L          +A K L    + +   +F  E  ++ +  H N+
Sbjct: 49  QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108

Query: 563 VKLIGCCTQRDERMLIYEYLPNKSLNDF 590
           ++L G  ++    M+I EY+ N +L+ F
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKF 136

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 73.3 bits (180), Expect = 7e-14
 Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 2/82 (2%)

Query: 510 NKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGC 568
           +KLG G +G VY+GV       +A K L K     +EEF  E  ++ +++H NLV+L+G 
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 284

Query: 569 CTQRDERMLIYEYLPNKSLNDF 590
           CT+     +I E++   +L D+
Sbjct: 285 CTREPPFYIITEFMTYGNLLDY 306

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 72.1 bits (177), Expect = 8e-14
 Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 9/105 (8%)

Query: 491 LPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENE 550
           LP+     IA   +      ++G+G +G V+ G    G+++A K    +        E E
Sbjct: 27  LPLLVQRTIA---KQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEA-SWFRETE 81

Query: 551 VLLIAKLQHRNLVKLIGCCTQ----RDERMLIYEYLPNKSLNDFI 591
           +     ++H N++  I    +      +  LI +Y  N SL D++
Sbjct: 82  IYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL 126

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 72.0 bits (177), Expect = 1e-13
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 5/87 (5%)

Query: 509 KNKLGEGGFGPVYKGVLIEGQE----IAAKRLSK-SSGQGMEEFENEVLLIAKLQHRNLV 563
              +G G FG V  G L    +    +A K L    + +   +F  E  ++ +  H N++
Sbjct: 50  DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDF 590
           +L G  T+    M++ EY+ N SL+ F
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSF 136

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 71.7 bits (176), Expect = 1e-13
 Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 9/105 (8%)

Query: 491 LPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENE 550
           LP+     IA        +  +G+G FG V++G    G+E+A K  S    +     E E
Sbjct: 32  LPLLVQRTIA---RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAE 86

Query: 551 VLLIAKLQHRNLVKLIGCCTQRD----ERMLIYEYLPNKSLNDFI 591
           +     L+H N++  I    + +    +  L+ +Y  + SL D++
Sbjct: 87  IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL 131

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 70.8 bits (174), Expect = 1e-13
 Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 6/86 (6%)

Query: 510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
             +G+G +G V++G   +G+ +A K  S    +     E E+     L+H N++  I   
Sbjct: 14  ECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEK-SWFRETELYNTVMLRHENILGFIASD 71

Query: 570 T----QRDERMLIYEYLPNKSLNDFI 591
                   +  LI  Y    SL D++
Sbjct: 72  MTSRHSSTQLWLITHYHEMGSLYDYL 97

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 70.7 bits (174), Expect = 1e-13
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 5/86 (5%)

Query: 509 KNKLGEGGFGPVYKGVLIEGQE---IAAKRLSK-SSGQGMEEFENEVLLIAKLQHRNLVK 564
             +LG G FG V +GV    ++   +A K L + +     EE   E  ++ +L +  +V+
Sbjct: 15  DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 74

Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDF 590
           LIG C   +  ML+ E      L+ F
Sbjct: 75  LIGVCQA-EALMLVMEMAGGGPLHKF 99

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 72.4 bits (178), Expect = 1e-13
 Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 4/83 (4%)

Query: 509 KNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGC 568
              +G+G FG V  G    G ++A K +   +    + F  E  ++ +L+H NLV+L+G 
Sbjct: 198 LQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGV 254

Query: 569 CTQRDER-MLIYEYLPNKSLNDF 590
             +      ++ EY+   SL D+
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDY 277

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 70.9 bits (174), Expect = 2e-13
 Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 3/137 (2%)

Query: 465 HRKQGKTDGSSKLDYNDRGNREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGV 524
            + +GK DG    DY+       +  +P    +   +  + +    +LG G FG V++ V
Sbjct: 12  SKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCV 71

Query: 525 LIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP 583
               G+   AK ++          +NE+ ++ +L H  L+ L      + E +LI E+L 
Sbjct: 72  EKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS 131

Query: 584 NKSLNDFIF--GFLYTE 598
              L D I    +  +E
Sbjct: 132 GGELFDRIAAEDYKMSE 148

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 71.9 bits (176), Expect = 2e-13
 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 5/87 (5%)

Query: 509 KNKLGEGGFGPVYKGVLIEGQE---IAAKRL-SKSSGQGMEEFENEVLLIAKLQHRNLVK 564
             +LG G FG V +GV    ++   +A K L   +     EE   E  ++ +L +  +V+
Sbjct: 341 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 400

Query: 565 LIGCCTQRDERMLIYEYLPNKSLNDFI 591
           LIG C   +  ML+ E      L+ F+
Sbjct: 401 LIGVCQ-AEALMLVMEMAGGGPLHKFL 426

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 71.3 bits (175), Expect = 2e-13
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)

Query: 510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
            KLG G FG V+     +  ++A K + K     +E F  E  ++  LQH  LVKL    
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 252

Query: 570 TQRDERMLIYEYLPNKSLNDF 590
           T+ +   +I E++   SL DF
Sbjct: 253 TK-EPIYIITEFMAKGSLLDF 272

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 69.6 bits (171), Expect = 3e-13
 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 8/88 (9%)

Query: 511 KLGEGGFGPVYKGVL--IEGQEI--AAKRL---SKSSGQGMEEFENEVLLIAKLQHRNLV 563
           KLG+G FG V +G      G+ +  A K L     S  + M++F  EV  +  L HRNL+
Sbjct: 25  KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +L G         ++ E  P  SL D +
Sbjct: 85  RLYGVVLT-PPMKMVTELAPLGSLLDRL 111

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 69.3 bits (170), Expect = 6e-13
 Identities = 29/137 (21%), Positives = 53/137 (38%), Gaps = 2/137 (1%)

Query: 464 RHRKQGKTDGSSKLDYNDRGN-REEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYK 522
            H      D  ++  Y   G    E+ +  +   +   +         K+GEG  G V  
Sbjct: 4   HHHHSSGVDLGTENLYFQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCL 63

Query: 523 GVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY 581
                 G+++A K +     Q  E   NEV+++   QH N+V++       +E  ++ E+
Sbjct: 64  AREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEF 123

Query: 582 LPNKSLNDFIFGFLYTE 598
           L   +L D +      E
Sbjct: 124 LQGGALTDIVSQVRLNE 140

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 68.4 bits (168), Expect = 7e-13
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)

Query: 509 KNKLGEGGFGPVYKGVLI--EGQEI--AAKRLSK-SSGQGMEEFENEVLLIAKLQHRNLV 563
              LGEG FG VY+GV    +G++I  A K   K  +    E+F +E +++  L H ++V
Sbjct: 17  NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           KLIG   + +   +I E  P   L  ++
Sbjct: 77  KLIGIIEE-EPTWIIMELYPYGELGHYL 103

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 68.4 bits (168), Expect = 7e-13
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 6/85 (7%)

Query: 511 KLGEGGFGPVYKGVLI--EGQEI--AAKRLSK-SSGQGMEEFENEVLLIAKLQHRNLVKL 565
            +GEG FG V++G+ +  E   +  A K     +S    E+F  E L + +  H ++VKL
Sbjct: 22  CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81

Query: 566 IGCCTQRDERMLIYEYLPNKSLNDF 590
           IG  T+ +   +I E      L  F
Sbjct: 82  IGVITE-NPVWIIMELCTLGELRSF 105

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 68.0 bits (167), Expect = 9e-13
 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 6/85 (7%)

Query: 511 KLGEGGFGPVYKGVL-IEGQEI--AAKRLSK--SSGQGMEEFENEVLLIAKLQHRNLVKL 565
           +LG G FG V KG   ++      A K L    +     +E   E  ++ +L +  +V++
Sbjct: 24  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83

Query: 566 IGCCTQRDERMLIYEYLPNKSLNDF 590
           IG C   +  ML+ E      LN +
Sbjct: 84  IGICEA-ESWMLVMEMAELGPLNKY 107

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 67.7 bits (166), Expect = 1e-12
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 11/112 (9%)

Query: 481 DRGNREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS 539
           D  +   E +    +            D+  LG+G +G VY G  +     IA K + + 
Sbjct: 9   DCESDLLEYDYEYDENG----------DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER 58

Query: 540 SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
             +  +    E+ L   L+H+N+V+ +G  ++     +  E +P  SL+  +
Sbjct: 59  DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALL 110

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 69.1 bits (169), Expect = 2e-12
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)

Query: 510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
            KLG+G FG V+ G       +A K L K      E F  E  ++ KL+H  LV+L    
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331

Query: 570 TQRDERMLIYEYLPNKSLNDF 590
           ++ +   ++ EY+   SL DF
Sbjct: 332 SE-EPIYIVTEYMSKGSLLDF 351

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 68.6 bits (168), Expect = 2e-12
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)

Query: 510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
            KLG+G FG V+ G       +A K L K      E F  E  ++ KL+H  LV+L    
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248

Query: 570 TQRDERMLIYEYLPNKSLNDF 590
           ++ +   ++ EY+   SL DF
Sbjct: 249 SE-EPIYIVTEYMSKGSLLDF 268

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 67.0 bits (164), Expect = 3e-12
 Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 1/90 (1%)

Query: 503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRN 561
            E +    +LG+G FG VYK    E G   AAK +   S + +E++  E+ ++A   H  
Sbjct: 18  NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 77

Query: 562 LVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +VKL+G      +  ++ E+ P  +++  +
Sbjct: 78  IVKLLGAYYHDGKLWIMIEFCPGGAVDAIM 107

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 66.9 bits (164), Expect = 3e-12
 Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRN 561
            + ++   K+G+G  G VY  + +  GQE+A ++++       E   NE+L++ + ++ N
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78

Query: 562 LVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTE 598
           +V  +      DE  ++ EYL   SL D +      E
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE 115

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 68.3 bits (167), Expect = 3e-12
 Identities = 27/138 (19%), Positives = 54/138 (39%), Gaps = 3/138 (2%)

Query: 464 RHRKQGKTDGSSKLDYNDRGNREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKG 523
              K  +  G+   +Y++      +   P    +   +  +++    +LG G FG V++ 
Sbjct: 117 EQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRV 176

Query: 524 VLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL 582
                G   AAK +        E    E+  ++ L+H  LV L       +E ++IYE++
Sbjct: 177 TERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236

Query: 583 PNKSLNDFIF--GFLYTE 598
               L + +       +E
Sbjct: 237 SGGELFEKVADEHNKMSE 254

>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109

 Score = 62.6 bits (152), Expect = 3e-12
 Identities = 26/129 (20%), Positives = 48/129 (37%), Gaps = 21/129 (16%)

Query: 18  RDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPL 77
           R+ L  G+ +  G++L      +                + Y    + T +W +N     
Sbjct: 1   RNLLTNGEGLYAGQSLDVEP--YHFIMQEDCNL------VLYD---HSTSVWASNTGILG 49

Query: 78  SDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPD 137
                   + S GN   V+ ++    +W+S++ R   N V VL E GN+V+         
Sbjct: 50  KKGC-KAVLQSDGN--FVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYGSD----- 101

Query: 138 NFLWQSFDY 146
             +W +  Y
Sbjct: 102 --IWSTGTY 108

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 65.8 bits (161), Expect = 7e-12
 Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 10/112 (8%)

Query: 504 ENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNL 562
           +++    KLGEGGF  V     L +G   A KR+     Q  EE + E  +     H N+
Sbjct: 29  KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNI 88

Query: 563 VKLIGCCTQRDERM----LIYEYLPNKSLNDFI-----FGFLYTEHFFWSFF 605
           ++L+  C +         L+  +    +L + I      G   TE       
Sbjct: 89  LRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLL 140

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 65.9 bits (161), Expect = 1e-11
 Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 13/143 (9%)

Query: 469 GKTDGSSKLDYNDRGNREEEMELP----IFDWMAIANATENFSD------KNKLGEGGFG 518
              D + ++    +      +++P     FD   +       +          LG G FG
Sbjct: 44  SNADLTERMPVKSKRTSALAVDIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFG 103

Query: 519 PVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML 577
            V+K      G ++AAK +     +  EE +NE+ ++ +L H NL++L      +++ +L
Sbjct: 104 QVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVL 163

Query: 578 IYEYLPNKSLNDFIF--GFLYTE 598
           + EY+    L D I    +  TE
Sbjct: 164 VMEYVDGGELFDRIIDESYNLTE 186

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 64.7 bits (158), Expect = 1e-11
 Identities = 20/88 (22%), Positives = 42/88 (47%), Gaps = 7/88 (7%)

Query: 511 KLGEGGFGPVYKGV-LIEGQEIAAK--RLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIG 567
           ++G G F  VYKG+      E+A    +  K +    + F+ E  ++  LQH N+V+   
Sbjct: 33  EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 92

Query: 568 CC--TQRDERML--IYEYLPNKSLNDFI 591
               T + ++ +  + E + + +L  ++
Sbjct: 93  SWESTVKGKKCIVLVTELMTSGTLKTYL 120

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 62.3 bits (152), Expect = 8e-11
 Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 17/119 (14%)

Query: 503 TENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRN 561
             +F +   LG+G FG V K    ++ +  A K++  +  + +    +EV+L+A L H+ 
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASLNHQY 63

Query: 562 LVKLIGC----------CTQRDERMLIY---EYLPNKSLNDFIF--GFLYTEHFFWSFF 605
           +V+               T   ++  ++   EY  N +L D I           +W  F
Sbjct: 64  VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF 122

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110

 Score = 58.3 bits (141), Expect = 8e-11
 Identities = 23/125 (18%), Positives = 46/125 (36%), Gaps = 21/125 (16%)

Query: 19  DTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLS 78
           ++L+   S+  G +L     S+ L              + Y    +G  +W +N     S
Sbjct: 2   NSLSSPNSLFTGHSL-EVGPSYRLIMQGDCNF------VLYD---SGKPVWASNTGGLGS 51

Query: 79  DRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDN 138
                L      N  LV+ + +N ++W +  +    + V VL +  N+V+          
Sbjct: 52  GCRLTL----HNNGNLVIYDQSNRVIWQTKTNGKEDHYVLVLQQDRNVVIY-------GP 100

Query: 139 FLWQS 143
            +W +
Sbjct: 101 VVWAT 105

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 62.3 bits (152), Expect = 1e-10
 Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 8/102 (7%)

Query: 504 ENFSDK----NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQ 558
           +   +K      LG G FG V++ V     +   AK +    G      + E+ ++   +
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIAR 59

Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF--GFLYTE 598
           HRN++ L       +E ++I+E++    + + I    F   E
Sbjct: 60  HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNE 101

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 62.3 bits (151), Expect = 2e-10
 Identities = 21/97 (21%), Positives = 41/97 (42%), Gaps = 9/97 (9%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKSSGQG-MEEFENEVLLIAK 556
           +       LG G FG V +            + +A K L + +         +E+ ++  
Sbjct: 22  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 81

Query: 557 L-QHRNLVKLIGCCTQRDER-MLIYEYLPNKSLNDFI 591
           +  H N+V L+G CT+     M+I E+    +L+ ++
Sbjct: 82  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 118

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 61.2 bits (149), Expect = 2e-10
 Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 3/90 (3%)

Query: 503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRN 561
            E F    KLGEG +G VYK +  E GQ +A K++       ++E   E+ ++ +    +
Sbjct: 28  EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPH 85

Query: 562 LVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +VK  G   +  +  ++ EY    S++D I
Sbjct: 86  VVKYYGSYFKNTDLWIVMEYCGAGSVSDII 115

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 61.3 bits (149), Expect = 2e-10
 Identities = 22/131 (16%), Positives = 46/131 (35%), Gaps = 15/131 (11%)

Query: 462 KRRHRKQGKTDGSSKLDYNDRGNREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVY 521
            +  R   +T+ +  +   ++    +        W          + + ++G G FG V+
Sbjct: 25  AKLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHW---------MTHQPRVGRGSFGEVH 75

Query: 522 KGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE 580
           +    + G + A K++     +       E++  A L    +V L G   +     +  E
Sbjct: 76  RMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130

Query: 581 YLPNKSLNDFI 591
            L   SL   I
Sbjct: 131 LLEGGSLGQLI 141

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 61.5 bits (149), Expect = 3e-10
 Identities = 14/95 (14%), Positives = 30/95 (31%), Gaps = 6/95 (6%)

Query: 503 TENFSDKNKLGEGGFGPVYKGV------LIEGQEIAAKRLSKSSGQGMEEFENEVLLIAK 556
           ++     + LGEG F  VY+            Q+   K    ++          +  +  
Sbjct: 64  SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKP 123

Query: 557 LQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
                 +K       ++  +L+ E     +L + I
Sbjct: 124 SMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAI 158

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 60.8 bits (148), Expect = 3e-10
 Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 5/92 (5%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRN 561
             +S   ++G GG   V++ +  + Q  A K ++      Q ++ + NE+  + KLQ  +
Sbjct: 28  RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 87

Query: 562 L--VKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
              ++L           ++ E   N  LN ++
Sbjct: 88  DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWL 118

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 60.5 bits (147), Expect = 6e-10
 Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 6/108 (5%)

Query: 504 ENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAK--RLSKSSGQGMEEFENEVLLIAKLQHR 560
           E +    K+GEG FG         +G++   K   +S+ S +  EE   EV ++A ++H 
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83

Query: 561 NLVKLIGCCTQRDERMLIYEYLPNKSLNDFI---FGFLYTEHFFWSFF 605
           N+V+      +     ++ +Y     L   I    G L+ E     +F
Sbjct: 84  NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWF 131

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 59.6 bits (145), Expect = 7e-10
 Identities = 30/123 (24%), Positives = 47/123 (38%), Gaps = 24/123 (19%)

Query: 504 ENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNL 562
            +F +   +G GGFG V+K    I+G+    KR+  ++    E+ E EV  +AKL H N+
Sbjct: 11  MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNI 66

Query: 563 VKLIGCCTQRDERM----------------LIYEYLPNKSLNDFI---FGFLYTEHFFWS 603
           V   GC    D                   +  E+    +L  +I    G    +     
Sbjct: 67  VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126

Query: 604 FFF 606
            F 
Sbjct: 127 LFE 129

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 60.1 bits (146), Expect = 7e-10
 Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 5/86 (5%)

Query: 510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNL--VKL 565
            ++G GG   V++ +  + Q  A K ++      Q ++ + NE+  + KLQ  +   ++L
Sbjct: 15  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 74

Query: 566 IGCCTQRDERMLIYEYLPNKSLNDFI 591
                      ++ E   N  LN ++
Sbjct: 75  YDYEITDQYIYMVMEC-GNIDLNSWL 99

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 59.3 bits (144), Expect = 8e-10
 Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 2/94 (2%)

Query: 500 ANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLS-KSSGQGMEEFENEVLLIAKL 557
           A+  E F+   K+G+G FG V+KG+     + +A K +  + +   +E+ + E+ ++++ 
Sbjct: 18  ADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC 77

Query: 558 QHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
               + K  G   +  +  +I EYL   S  D +
Sbjct: 78  DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL 111

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 59.8 bits (145), Expect = 1e-09
 Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 5/86 (5%)

Query: 510 NKLGEGGFGPVYKGVLIEGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNL--VKL 565
            ++G GG   V++ +  + Q  A K ++      Q ++ + NE+  + KLQ  +   ++L
Sbjct: 62  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121

Query: 566 IGCCTQRDERMLIYEYLPNKSLNDFI 591
                      ++ E   N  LN ++
Sbjct: 122 YDYEITDQYIYMVMEC-GNIDLNSWL 146

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115

 Score = 55.3 bits (133), Expect = 1e-09
 Identities = 28/125 (22%), Positives = 43/125 (34%), Gaps = 22/125 (17%)

Query: 19  DTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLS 78
           + L  GQ++    +L +    + L   +          + Y+   NG  IW +N D    
Sbjct: 3   NVLLSGQTLHADHSLQAGA--YTLTIQNKCNL------VKYQ---NGRQIWASNTDR--R 49

Query: 79  DRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDN 138
                L + S GN  LV+ +  N  VW S           VL + G  V+          
Sbjct: 50  GSGCRLTLLSDGN--LVIYDHNNNDVWGSACWGDNGKYALVLQKDGRFVIY-------GP 100

Query: 139 FLWQS 143
            LW  
Sbjct: 101 VLWSL 105

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 59.4 bits (144), Expect = 1e-09
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 5/106 (4%)

Query: 482 RGNREEEMELP-IFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLS-- 537
            G R   ++ P + +     +  + FSD  ++G G FG VY    +   + +A K++S  
Sbjct: 31  AGGRAGSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYS 90

Query: 538 -KSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL 582
            K S +  ++   EV  + KL+H N ++  GC  +     L+ EY 
Sbjct: 91  GKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC 136

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112

 Score = 55.3 bits (133), Expect = 1e-09
 Identities = 26/125 (20%), Positives = 49/125 (39%), Gaps = 20/125 (16%)

Query: 19  DTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLS 78
           D LN G  +  G +L      +     +        L ++     N   +W +  +   S
Sbjct: 2   DRLNSGHQLDTGGSLA--EGGYLFIIQNDCN-----LVLYD----NNRAVWASGTNGKAS 50

Query: 79  DRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDN 138
                L + + GN  LV+ +  +  +W+SN +R   N   +L    N+V+ D      +N
Sbjct: 51  GCV--LKMQNDGN--LVIYSG-SRAIWASNTNRQNGNYYLILQRDRNVVIYDNS----NN 101

Query: 139 FLWQS 143
            +W +
Sbjct: 102 AIWAT 106

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 58.9 bits (143), Expect = 2e-09
 Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 4/84 (4%)

Query: 512 LGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEE-FENEVLLIAKLQHRNLVKLIG 567
           LG+GGF   ++    +  +  A K + KS        E    E+ +   L H+++V   G
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108

Query: 568 CCTQRDERMLIYEYLPNKSLNDFI 591
                D   ++ E    +SL +  
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELH 132

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 58.3 bits (142), Expect = 2e-09
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 7/96 (7%)

Query: 503 TENFSDK----NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIA 555
           +  FSD      +LG+G F  V + V    G E AAK ++    S +  ++ E E  +  
Sbjct: 1   STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60

Query: 556 KLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           KLQH N+V+L     +     L+++ +    L + I
Sbjct: 61  KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI 96

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 58.0 bits (141), Expect = 2e-09
 Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 4/84 (4%)

Query: 512 LGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEE-FENEVLLIAKLQHRNLVKLIG 567
           LG+GGF   ++    +  +  A K + KS        E    E+ +   L H+++V   G
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82

Query: 568 CCTQRDERMLIYEYLPNKSLNDFI 591
                D   ++ E    +SL +  
Sbjct: 83  FFEDNDFVFVVLELCRRRSLLELH 106

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 58.0 bits (141), Expect = 2e-09
 Identities = 20/104 (19%), Positives = 41/104 (39%), Gaps = 8/104 (7%)

Query: 503 TENFSDK----NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKL 557
             + +      N +G G +G V   V        AAK++ K   + ++ F+ E+ ++  L
Sbjct: 4   KGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL 63

Query: 558 QHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF--GFLYTEH 599
            H N+++L        +  L+ E      L + +      + E 
Sbjct: 64  DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV-FRES 106

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 58.1 bits (141), Expect = 2e-09
 Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 9/111 (8%)

Query: 504 ENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRL---SKSSGQGMEEFENEVLLIAKLQH 559
            NF  + K+G G F  VY+   L++G  +A K++        +   +   E+ L+ +L H
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91

Query: 560 RNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI-----FGFLYTEHFFWSFF 605
            N++K      + +E  ++ E      L+  I        L  E   W +F
Sbjct: 92  PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYF 142

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 57.7 bits (140), Expect = 4e-09
 Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 14/109 (12%)

Query: 503 TENFSD----KNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS------GQGMEEFENEV 551
            +   D      +LG G F  V K      G E AAK + K        G   EE E EV
Sbjct: 7   QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREV 66

Query: 552 LLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF--GFLYTE 598
            ++ ++ H N++ L      R + +LI E +    L DF+       +E
Sbjct: 67  SILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSE 114

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 57.7 bits (140), Expect = 4e-09
 Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 12/108 (11%)

Query: 503 TENFSDK----NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS------SGQGMEEFENEV 551
            +   D      +LG G F  V K      G E AAK + K        G   EE E EV
Sbjct: 7   QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREV 66

Query: 552 LLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI-FGFLYTE 598
            ++ ++ H N++ L      R + +LI E +    L DF+      +E
Sbjct: 67  SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE 114

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 57.3 bits (139), Expect = 4e-09
 Identities = 32/104 (30%), Positives = 44/104 (42%), Gaps = 6/104 (5%)

Query: 503 TENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKR--LSKSSGQGMEEFENEVLLIAKL-Q 558
           T  F +  K+G G FG V+K V  ++G   A KR     +     +    EV   A L Q
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69

Query: 559 HRNLVKLIGCCTQRDERMLIY-EYLPNKSLNDFIFGFLYTEHFF 601
           H ++V+      + D  MLI  EY    SL D I        +F
Sbjct: 70  HSHVVRYFSAWAEDD-HMLIQNEYCNGGSLADAISENYRIMSYF 112

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 56.9 bits (138), Expect = 6e-09
 Identities = 27/119 (22%), Positives = 53/119 (44%), Gaps = 15/119 (12%)

Query: 496 WMAIANATENFSDK----NKLGEGGFGPVYKGVLIE-GQEIAAK-----RLSKSSGQGME 545
            + +A+    F D       +G+G F  V + +  E GQ+ A K     + + S G   E
Sbjct: 12  ILDMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTE 71

Query: 546 EFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI-----FGFLYTEH 599
           + + E  +   L+H ++V+L+   +      +++E++    L   I      GF+Y+E 
Sbjct: 72  DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA 130

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 56.6 bits (137), Expect = 7e-09
 Identities = 19/93 (20%), Positives = 40/93 (43%), Gaps = 2/93 (2%)

Query: 501 NATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLS-KSSGQGMEEFENEVLLIAKLQ 558
              +++  +  +G G    V         +++A KR++ +     M+E   E+  +++  
Sbjct: 12  INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 71

Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           H N+V        +DE  L+ + L   S+ D I
Sbjct: 72  HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDII 104

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 56.7 bits (137), Expect = 7e-09
 Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 4/95 (4%)

Query: 501 NATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEE-FENEVLLIAKLQ 558
            +   +   + LG+G    V++G   + G   A K  +  S     +    E  ++ KL 
Sbjct: 6   TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN 65

Query: 559 HRNLVKLIGCCTQRDERM--LIYEYLPNKSLNDFI 591
           H+N+VKL     +   R   LI E+ P  SL   +
Sbjct: 66  HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVL 100

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 56.9 bits (138), Expect = 7e-09
 Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 11/91 (12%)

Query: 503 TENFSDK----NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS------SGQGMEEFENEV 551
            EN  D      +LG G F  V K      G + AAK + K        G   E+ E EV
Sbjct: 6   QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65

Query: 552 LLIAKLQHRNLVKLIGCCTQRDERMLIYEYL 582
            ++ ++QH N++ L      + + +LI E +
Sbjct: 66  SILKEIQHPNVITLHEVYENKTDVILILELV 96

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 57.4 bits (139), Expect = 7e-09
 Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 7/102 (6%)

Query: 497 MAIANATENFSDK----NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFEN 549
           M I +   + S+      KLG G +G V          E A K + K+  S     +   
Sbjct: 26  MFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE 85

Query: 550 EVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           EV ++  L H N++KL      +    L+ E      L D I
Sbjct: 86  EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEI 127

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 56.0 bits (136), Expect = 9e-09
 Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 10/108 (9%)

Query: 500 ANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS------SGQGMEEFENEVL 552
           +   +++    +LG G F  V K      G+E AAK + K        G   EE E EV 
Sbjct: 1   SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 60

Query: 553 LIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF--GFLYTE 598
           ++ +++H N++ L      + + +LI E +    L DF+       TE
Sbjct: 61  ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES-LTE 107

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 56.6 bits (137), Expect = 9e-09
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 7/100 (7%)

Query: 499 IANATENFSDK----NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEV 551
           + NA+  FSD      +LG+G F  V + V    G E AAK ++    S +  ++ E E 
Sbjct: 20  MMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREA 79

Query: 552 LLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
            +  KLQH N+V+L     +     L+++ +    L + I
Sbjct: 80  RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI 119

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 56.0 bits (136), Expect = 9e-09
 Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 8/104 (7%)

Query: 503 TENFSDK----NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKL 557
           T N          LG G F  V+       G+  A K + KS        ENE+ ++ K+
Sbjct: 4   TTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI 63

Query: 558 QHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF--GFLYTEH 599
           +H N+V L           L+ + +    L D I   G  YTE 
Sbjct: 64  KHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGV-YTEK 106

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 55.8 bits (135), Expect = 1e-08
 Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 18/120 (15%)

Query: 504 ENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRN 561
            +F     LG GGFG V++    ++    A KR+         E+   EV  +AKL+H  
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64

Query: 562 LVKLIGC---------CTQRDERMLIY---EYLPNKSLNDFI----FGFLYTEHFFWSFF 605
           +V+                   ++ +Y   +    ++L D++                 F
Sbjct: 65  IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 55.7 bits (135), Expect = 1e-08
 Identities = 23/112 (20%), Positives = 39/112 (34%), Gaps = 10/112 (8%)

Query: 504 ENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHR 560
           E++     +G G +G   K     +G+ +  K L     +    +   +EV L+ +L+H 
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65

Query: 561 NLVKLIGCCTQRDERML--IYEYLPNKSLNDFI-----FGFLYTEHFFWSFF 605
           N+V+       R    L  + EY     L   I           E F     
Sbjct: 66  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM 117

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109

 Score = 52.2 bits (125), Expect = 1e-08
 Identities = 29/125 (23%), Positives = 45/125 (36%), Gaps = 22/125 (17%)

Query: 19  DTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLS 78
           + L  G+++  GE L   N  +                + Y        IW  N      
Sbjct: 2   NILYSGETLSPGEFL--NNGRYVFIMQEDCNL------VLYD---VDKPIWATNTGGL-- 48

Query: 79  DRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDN 138
           DR   L++ S GN  LV+ +  N  +W+SN      N V VL +  N+V+          
Sbjct: 49  DRRCHLSMQSDGN--LVVYSPRNNPIWASNTGGENGNYVCVLQKDRNVVIY-------GT 99

Query: 139 FLWQS 143
             W +
Sbjct: 100 ARWAT 104

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 55.8 bits (135), Expect = 1e-08
 Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 7/115 (6%)

Query: 484 NREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQG 543
           +      L   D  A+ +    F     +G G +G VYKG  ++  ++AA ++   +G  
Sbjct: 4   SDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE 63

Query: 544 MEEFENEVLLIAKL-QHRNLVKLIGC------CTQRDERMLIYEYLPNKSLNDFI 591
            EE + E+ ++ K   HRN+    G           D+  L+ E+    S+ D I
Sbjct: 64  EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI 118

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 55.3 bits (134), Expect = 2e-08
 Identities = 23/105 (21%), Positives = 35/105 (33%), Gaps = 6/105 (5%)

Query: 503 TENFSDK----NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEE-FENEVLLIAK 556
                D      KLG G FG V+       G E   K ++K   Q   E  E E+ ++  
Sbjct: 17  QGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKS 76

Query: 557 LQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFF 601
           L H N++K+           ++ E      L + I          
Sbjct: 77  LDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKAL 121

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119

 Score = 51.8 bits (124), Expect = 2e-08
 Identities = 23/137 (16%), Positives = 43/137 (31%), Gaps = 24/137 (17%)

Query: 7   FLFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGT 66
            +F           L+  +S+     ++     +     +          + Y    N  
Sbjct: 3   IIFSKQPDDNHPQILHATESL----EILFGTHVYRFIMQTDCNL------VLYD---NNN 49

Query: 67  VIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNL 126
            IW  N     +       +   G   LV++ + N  VW S  +  A + V VL    N+
Sbjct: 50  PIWATNTGGLGNG--CRAVLQPDGV--LVVITNENVTVWQSPVAGKAGHYVLVLQPDRNV 105

Query: 127 VVKDGKDIDPDNFLWQS 143
           V+         + LW +
Sbjct: 106 VIY-------GDALWAT 115

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 55.9 bits (135), Expect = 2e-08
 Identities = 32/103 (31%), Positives = 44/103 (42%), Gaps = 8/103 (7%)

Query: 497 MAIANATENFSDK----NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFE 548
           M + ++T  FSD+      LG+G FG V        GQE A K +SK         E   
Sbjct: 15  MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 74

Query: 549 NEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
            EV L+ +L H N++KL      +    L+ E      L D I
Sbjct: 75  REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI 117

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 55.6 bits (134), Expect = 2e-08
 Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 4/95 (4%)

Query: 501 NATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEE-FENEVLLIAKLQ 558
            +   +   + LG+G    V++G   + G   A K  +  S     +    E  ++ KL 
Sbjct: 6   TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN 65

Query: 559 HRNLVKLIGCCTQRDERM--LIYEYLPNKSLNDFI 591
           H+N+VKL     +   R   LI E+ P  SL   +
Sbjct: 66  HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVL 100

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 54.5 bits (132), Expect = 3e-08
 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 7/87 (8%)

Query: 503 TENFSDK----NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIA 555
              F+++      LG+G FG V K       QE A K ++K+    +       EV L+ 
Sbjct: 17  QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLK 76

Query: 556 KLQHRNLVKLIGCCTQRDERMLIYEYL 582
           KL H N++KL           ++ E  
Sbjct: 77  KLDHPNIMKLFEILEDSSSFYIVGELY 103

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 55.2 bits (133), Expect = 4e-08
 Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 7/98 (7%)

Query: 505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEV-LLIAKLQHRNLV 563
           +F  K+ LG G  G +    + + +++A KR+           + EV LL    +H N++
Sbjct: 25  SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVI 81

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI--FGFLYTEH 599
           +       R  + +  E     +L +++    F +   
Sbjct: 82  RYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGL 118

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 54.5 bits (131), Expect = 4e-08
 Identities = 22/118 (18%), Positives = 45/118 (38%), Gaps = 6/118 (5%)

Query: 480 NDRGNREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAK---- 534
           +   +     E   F   ++    + +  K  +G+G +G V   +  +     A K    
Sbjct: 2   HHHHHHSSGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNK 61

Query: 535 -RLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
            ++ + + + +E  + EV L+ KL H N+ +L           L+ E      L D +
Sbjct: 62  NKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKL 119

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 54.2 bits (131), Expect = 4e-08
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 7/87 (8%)

Query: 503 TENFSD-----KNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAK 556
           +  F D     ++ LGEG    V   + +   QE A K + K  G        EV ++ +
Sbjct: 7   SGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQ 66

Query: 557 LQ-HRNLVKLIGCCTQRDERMLIYEYL 582
            Q HRN+++LI    + D   L++E +
Sbjct: 67  CQGHRNVLELIEFFEEEDRFYLVFEKM 93

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 53.7 bits (130), Expect = 4e-08
 Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 512 LGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEE-FENEVLLIAKLQHRNLVKLIG 567
           LG+G F  VY+   I  G E+A K + K +    GM +  +NEV +  +L+H ++++L  
Sbjct: 19  LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78

Query: 568 CCTQRDERMLIYEYLPNKSLNDFI 591
                +   L+ E   N  +N ++
Sbjct: 79  YFEDSNYVYLVLEMCHNGEMNRYL 102

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 54.7 bits (132), Expect = 5e-08
 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 7/87 (8%)

Query: 503 TENFSDK----NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIA 555
              F+++      LG+G FG V K       QE A K ++K+    +       EV L+ 
Sbjct: 17  QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLK 76

Query: 556 KLQHRNLVKLIGCCTQRDERMLIYEYL 582
           KL H N++KL           ++ E  
Sbjct: 77  KLDHPNIMKLFEILEDSSSFYIVGELY 103

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 54.4 bits (131), Expect = 6e-08
 Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 9/98 (9%)

Query: 499 IANATENFSD----KNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEV-LL 553
           I N  ++  +    +  LG G  G V      +G+ +A KR+        +    E+ LL
Sbjct: 6   IPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLL 62

Query: 554 IAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
                H N+++     T      +  E   N +L D +
Sbjct: 63  TESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLV 99

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 54.0 bits (130), Expect = 6e-08
 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 9/90 (10%)

Query: 511 KLGEGGFGPVYKGV-LIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQ-HRNLVKLIGC 568
            L EGGF  VY+   +  G+E A KRL  +  +       EV  + KL  H N+V+    
Sbjct: 35  VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94

Query: 569 CTQRDERM-------LIYEYLPNKSLNDFI 591
            +   E         L+   L    L +F+
Sbjct: 95  ASIGKEESDTGQAEFLLLTELCKGQLVEFL 124

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109

 Score = 49.9 bits (119), Expect = 8e-08
 Identities = 28/127 (22%), Positives = 40/127 (31%), Gaps = 25/127 (19%)

Query: 17  ARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAP 76
             + L  GQ++     L   N  F+L           Y G W     N            
Sbjct: 2   GTNYLLSGQTLDTEGHLK--NGDFDLVMQDDCNL-VLYNGNWQSNTAN------------ 46

Query: 77  LSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDP 136
            + R   L ++  G   LV+ N     VW S A     N  AV+   G LVV        
Sbjct: 47  -NGRDCKLTLTDYGE--LVIKNGDGSTVWKSGAQSVKGNYAAVVHPDGRLVVF------- 96

Query: 137 DNFLWQS 143
              +++ 
Sbjct: 97  GPSVFKI 103

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 53.5 bits (129), Expect = 9e-08
 Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 12/88 (13%)

Query: 503 TENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFEN-EVLLIAKLQHRN 561
              +++   +G G FG V++  L+E  E+A K++ +      + F+N E+ ++  ++H N
Sbjct: 39  EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPN 93

Query: 562 LVKLIGCCTQRDERM------LIYEYLP 583
           +V L        ++       L+ EY+P
Sbjct: 94  VVDLKAFFYSNGDKKDEVFLNLVLEYVP 121

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113

 Score = 49.5 bits (118), Expect = 1e-07
 Identities = 18/112 (16%), Positives = 35/112 (31%), Gaps = 13/112 (11%)

Query: 17  ARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAP 76
            R+ L   Q + D   L + +  + L              +  K      ++W +     
Sbjct: 5   VRNVLFSSQVMYDNAQLATRD--YSLVMRDDCNL------VLTKG-SKTNIVWESGTS-- 53

Query: 77  LSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVV 128
              R     +    +  L + +     V+ SN      + V +L  +G  VV
Sbjct: 54  --GRGQHCFMRLGHSGELDITDDRLNTVFVSNTVGQEGDYVLILQINGQAVV 103

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 53.7 bits (128), Expect = 2e-07
 Identities = 77/546 (14%), Positives = 155/546 (28%), Gaps = 141/546 (25%)

Query: 114 RNPVAVLLES--GNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISS 171
           ++ ++V  ++   N   KD +D+       +  D   HI+++      + V+G  R    
Sbjct: 19  KDILSVFEDAFVDNFDCKDVQDMPKSILSKEEID---HIIMSK-----DAVSGTLRLF-- 68

Query: 172 WKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIR--YRAGSWNGLHWTGMPQLQPNPVYTF 229
           W       +           V + V      +R  Y    +         + QP+ +   
Sbjct: 69  WTLLSKQEE----------MVQKFV---EEVLRINY---KFLMSPIKTEQR-QPSMMTR- 110

Query: 230 EYVS------NENEVFYRFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSG-- 281
            Y+       N+N+VF      K +V  +     L    R   + + +  A  V   G  
Sbjct: 111 MYIEQRDRLYNDNQVF-----AKYNVSRLQPYLKL----R-QALLELRP-AKNVLIDGVL 159

Query: 282 ------LILDQCDNYALCGAYAVCNMNS-----NSAKCECLEGFVPKSPSEWDLLDK-SD 329
                 + LD C +Y +      C M+      N   C   E           +L+    
Sbjct: 160 GSGKTWVALDVCLSYKV-----QCKMDFKIFWLNLKNCNSPE----------TVLEMLQK 204

Query: 330 GCVRRTQLDCEHGDGF----LKRESVKLPDTR-FSLVDNKISLLECKELCSKNC------ 378
              +         D      L+  S++    R       +  LL    + +         
Sbjct: 205 LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL 264

Query: 379 SC-----TAYAN-ADVRGGGSGCLLWFHDLIDMKELSESGQDLFVRMAASELDDIERKKP 432
           SC     T +    D     +   +            E  + L ++       D+    P
Sbjct: 265 SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV-KSLLLKYLDCRPQDL----P 319

Query: 433 KKKKKVAIVITSVLLVTGVI--LLGGFVYLWKR-RHRKQGKTDGSSKLDYNDRGNREEEM 489
           ++                +I   +   +  W   +H    K     +   N      E  
Sbjct: 320 REVLTTN------PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV----LEPA 369

Query: 490 EL-PIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFE 548
           E   +FD +++      F     +       ++  V+     +   +L K S        
Sbjct: 370 EYRKMFDRLSV------FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS-------- 415

Query: 549 NEVLLIAKLQHRNLVKLIGC-----CTQRDE----RMLIYEYLPNKSLNDFIFGFLYTEH 599
               L+ K    + + +            +E    R ++  Y   K+ +       Y + 
Sbjct: 416 ----LVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ 471

Query: 600 FFWSFF 605
           +F+S  
Sbjct: 472 YFYSHI 477

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 52.6 bits (126), Expect = 2e-07
 Identities = 20/111 (18%), Positives = 39/111 (35%), Gaps = 2/111 (1%)

Query: 504 ENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLS-KSSGQGMEEFENEVLLIAKLQHRN 561
            +F     +G GGFG V++    ++    A KR+   +     E+   EV  +AKL+H  
Sbjct: 6   TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65

Query: 562 LVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFFFSFENLS 612
           +V+      +        E       ++     L +     +       + 
Sbjct: 66  IVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMD 116

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110

 Score = 49.1 bits (117), Expect = 2e-07
 Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 16/115 (13%)

Query: 14  TATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANR 73
                + L  GQ +     L + N   +L            L ++  K       W +N 
Sbjct: 2   IPFTNNLLFSGQVLYGDGRLTAKN--HQLVMQGDCN-----LVLYGGKY-----GWQSNT 49

Query: 74  DAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVV 128
               +     L ++ +G   L++ +     +WSS +S      V +L + G  V+
Sbjct: 50  HG--NGEHCFLRLNHKGE--LIIKDDDFKTIWSSRSSSKQGEYVLILQDDGFGVI 100

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110

 Score = 39.5 bits (92), Expect = 4e-04
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 8/72 (11%)

Query: 72  NRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDG 131
             D  L+ ++  L +    N  LVL        W SN      +    L   G L++KD 
Sbjct: 16  YGDGRLTAKNHQLVMQGDCN--LVLYGGK--YGWQSNTHGNGEHCFLRLNHKGELIIKDD 71

Query: 132 KDIDPDNFLWQS 143
                   +W S
Sbjct: 72  D----FKTIWSS 79

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 52.7 bits (127), Expect = 2e-07
 Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 7/86 (8%)

Query: 503 TENFSDK----NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEE--FENEVLLIA 555
              F+++     +LG+G F  V + V +  GQE AA  ++       +    E E  +  
Sbjct: 6   CTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICR 65

Query: 556 KLQHRNLVKLIGCCTQRDERMLIYEY 581
            L+H N+V+L    ++     LI++ 
Sbjct: 66  LLKHPNIVRLHDSISEEGHHYLIFDL 91

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 52.3 bits (126), Expect = 2e-07
 Identities = 25/109 (22%), Positives = 40/109 (36%), Gaps = 14/109 (12%)

Query: 503 TENFSDK-----NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLI 554
            ENF++       +LG G F  V + +    GQE AAK L K         E  +E+ ++
Sbjct: 23  MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVL 82

Query: 555 AKLQHR-NLVKLIGCCTQRDERMLIYEYLPNKSLNDFI----FGFLYTE 598
              +    ++ L        E +LI EY     +             +E
Sbjct: 83  ELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEM-VSE 130

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 52.2 bits (125), Expect = 3e-07
 Identities = 15/94 (15%), Positives = 30/94 (31%), Gaps = 5/94 (5%)

Query: 503 TENFSDKNKLGEG--GFGPVYKGVLIEGQEIAA-KR--LSKSSGQGMEEFENEVLLIAKL 557
              +     +G+G      V         E    +R  L   S + +   + E+ +    
Sbjct: 24  GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF 83

Query: 558 QHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
            H N+V         +E  ++  ++   S  D I
Sbjct: 84  NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLI 117

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 51.8 bits (125), Expect = 3e-07
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 14/87 (16%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFEN--------EVLLIA 555
           E +    K+GEG +G VYK    +G+ +A KR+       ++  +         E+ L+ 
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIR------LDAEDEGIPSTAIREISLLK 74

Query: 556 KLQHRNLVKLIGCCTQRDERMLIYEYL 582
           +L H N+V LI          L++E++
Sbjct: 75  ELHHPNIVSLIDVIHSERCLTLVFEFM 101

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 51.2 bits (122), Expect = 7e-07
 Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)

Query: 505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEE-FENEVLLIAKLQHRNL 562
            +  K +LG GGFG V + +  + G+++A K+  +       E +  E+ ++ KL H N+
Sbjct: 15  PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 74

Query: 563 VKLI------GCCTQRDERMLIYEYLPNKSLNDFI 591
           V               D  +L  EY     L  ++
Sbjct: 75  VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL 109

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276

 Score = 50.0 bits (118), Expect = 8e-07
 Identities = 35/171 (20%), Positives = 60/171 (35%), Gaps = 22/171 (12%)

Query: 14  TATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANR 73
                  L   Q++  G+ L+S N+ F+L     G      L I      NG  +WVAN 
Sbjct: 10  NGVGTSVLPAYQTLSAGQYLLSPNQRFKLLLQGDGN-----LVIQD----NGATVWVANE 60

Query: 74  DAP----LSDRSGALNISSQGNATLVLLNSTNGIVWSS-----NASRTARNPVAVLLESG 124
             P    +  R+    ++        L + +   VW +      ++        VL + G
Sbjct: 61  QQPFSSTIPLRNKKAPLAFYVQYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDG 120

Query: 125 NLVVKDGKDI--DPDNFLWQSFDYPSHILIAGMKL--GVNLVTGLNRFISS 171
           N+V+ D   +               S +L  G +L  GV    G ++ +  
Sbjct: 121 NIVLVDSLALWNGTPAIPLVPGAIDSLLLAPGSELVQGVVYGAGASKLVFQ 171

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276

 Score = 47.0 bits (110), Expect = 7e-06
 Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 12/86 (13%)

Query: 63  GNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLE 122
            NG   W A      +   GA+    QG+  LV+  + N ++W S+    A + V  L  
Sbjct: 181 PNGAATWNAG-----TQGKGAVRAVFQGDGNLVVYGAGNAVLWHSHTGGHA-SAVLRLQA 234

Query: 123 SGNLVVKDGKDIDPDNFLWQSFDYPS 148
           +G++ + D K +      W  F +  
Sbjct: 235 NGSIAILDEKPV------WARFGFQP 254

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 49.8 bits (120), Expect = 9e-07
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 14/87 (16%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFEN--------EVLLIA 555
           E +    K+GEG +G VYK     G+  A K++       +E+ +         E+ ++ 
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIR------LEKEDEGIPSTTIREISILK 55

Query: 556 KLQHRNLVKLIGCCTQRDERMLIYEYL 582
           +L+H N+VKL      +   +L++E+L
Sbjct: 56  ELKHSNIVKLYDVIHTKKRLVLVFEHL 82

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 49.9 bits (120), Expect = 1e-06
 Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 17/89 (19%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFEN---------EVLL 553
           E +    K+GEG +G V+K    + GQ +A K+        +E  ++         E+ +
Sbjct: 3   EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF-------LESEDDPVIKKIALREIRM 55

Query: 554 IAKLQHRNLVKLIGCCTQRDERMLIYEYL 582
           + +L+H NLV L+    ++    L++EY 
Sbjct: 56  LKQLKHPNLVNLLEVFRRKRRLHLVFEYC 84

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 49.9 bits (120), Expect = 1e-06
 Identities = 19/96 (19%), Positives = 42/96 (43%), Gaps = 12/96 (12%)

Query: 497 MAIANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFEN------ 549
           + + +  + +   + LGEG F  VYK       Q +A K++         E ++      
Sbjct: 3   LDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGH---RSEAKDGINRTA 59

Query: 550 --EVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP 583
             E+ L+ +L H N++ L+     +    L+++++ 
Sbjct: 60  LREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME 95

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 49.4 bits (119), Expect = 1e-06
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 15/88 (17%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFEN--------EVLLI 554
           ENF    K+GEG +G VYK      G+ +A K++       ++            E+ L+
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 56

Query: 555 AKLQHRNLVKLIGCCTQRDERMLIYEYL 582
            +L H N+VKL+      ++  L++E+L
Sbjct: 57  KELNHPNIVKLLDVIHTENKLYLVFEFL 84

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 49.6 bits (119), Expect = 1e-06
 Identities = 28/145 (19%), Positives = 53/145 (36%), Gaps = 10/145 (6%)

Query: 462 KRRHRKQGKTDGSSKLDYNDRGNREEEMELPIFDWMAIANATENFSDK----NKLGEGGF 517
                  G  +   +   +   +        + D+    +  +  SD     ++LG G  
Sbjct: 7   HSSGVDLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGAT 66

Query: 518 GPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERM 576
             VY+       +  A K L K+  +  +    E+ ++ +L H N++KL        E  
Sbjct: 67  SIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPNIIKLKEIFETPTEIS 124

Query: 577 LIYEYLPNKSLNDFIF--GFLYTEH 599
           L+ E +    L D I   G+ Y+E 
Sbjct: 125 LVLELVTGGELFDRIVEKGY-YSER 148

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 49.4 bits (119), Expect = 1e-06
 Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 15/88 (17%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAA-KRLSKSSGQGMEEFEN--------EVLLI 554
           + +    K+GEG +G V+K    E  EI A KR+       +++ +         E+ L+
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR------LDDDDEGVPSSALREICLL 55

Query: 555 AKLQHRNLVKLIGCCTQRDERMLIYEYL 582
            +L+H+N+V+L        +  L++E+ 
Sbjct: 56  KELKHKNIVRLHDVLHSDKKLTLVFEFC 83

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 49.6 bits (119), Expect = 2e-06
 Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 11/104 (10%)

Query: 503 TENFSD----KNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKL 557
           +  F+D    K  +G G +    + +      E A K + KS     EE E   +L+   
Sbjct: 17  SIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIE---ILLRYG 73

Query: 558 QHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF--GFLYTEH 599
           QH N++ L           ++ E +    L D I    F ++E 
Sbjct: 74  QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF-FSER 116

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 50.1 bits (120), Expect = 2e-06
 Identities = 24/104 (23%), Positives = 36/104 (34%), Gaps = 18/104 (17%)

Query: 497 MAIANATENFSDK----NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS------------ 539
           M +        +      KLG G +G V          E A K + KS            
Sbjct: 25  MYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNK 84

Query: 540 -SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL 582
              +  EE  NE+ L+  L H N++KL      +    L+ E+ 
Sbjct: 85  NIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFY 128

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 49.7 bits (119), Expect = 2e-06
 Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 13/89 (14%)

Query: 503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFEN-EVLLIAKLQHR 560
             +++D   +G G FG VY+  L + G+ +A K++ +      + F+N E+ ++ KL H 
Sbjct: 53  EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHC 107

Query: 561 NLVKLIGCCTQRDERM------LIYEYLP 583
           N+V+L        E+       L+ +Y+P
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP 136

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 49.1 bits (118), Expect = 2e-06
 Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 17/89 (19%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFEN---------EVLL 553
           E + +   +GEG +G V K    + G+ +A K+        +E  ++         E+ L
Sbjct: 25  EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKF-------LESDDDKMVKKIAMREIKL 77

Query: 554 IAKLQHRNLVKLIGCCTQRDERMLIYEYL 582
           + +L+H NLV L+  C ++    L++E++
Sbjct: 78  LKQLRHENLVNLLEVCKKKKRWYLVFEFV 106

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 15/88 (17%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFEN--------EVLLI 554
           + +    KLGEG +G VYK +     + +A KR+       +E  E         EV L+
Sbjct: 34  DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIR------LEHEEEGVPGTAIREVSLL 87

Query: 555 AKLQHRNLVKLIGCCTQRDERMLIYEYL 582
            +LQHRN+++L           LI+EY 
Sbjct: 88  KELQHRNIIELKSVIHHNHRLHLIFEYA 115

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 48.7 bits (117), Expect = 3e-06
 Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 14/90 (15%)

Query: 501 NATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFEN-------EVL 552
           +++  F    KLG G +  VYKG+    G  +A K +       ++  E        E+ 
Sbjct: 2   SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVK------LDSEEGTPSTAIREIS 55

Query: 553 LIAKLQHRNLVKLIGCCTQRDERMLIYEYL 582
           L+ +L+H N+V+L       ++  L++E++
Sbjct: 56  LMKELKHENIVRLYDVIHTENKLTLVFEFM 85

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 48.4 bits (116), Expect = 3e-06
 Identities = 21/121 (17%), Positives = 44/121 (36%), Gaps = 18/121 (14%)

Query: 495 DWMAIANATENFSDK----NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGM----- 544
             +  +++T  F +       LG G    V + +     +E A K +  + G        
Sbjct: 4   AALPGSHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEV 63

Query: 545 ----EEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF--GFLYT 597
               E    EV ++ K+  H N+++L           L+++ +    L D++       +
Sbjct: 64  QELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT-LS 122

Query: 598 E 598
           E
Sbjct: 123 E 123

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 48.4 bits (116), Expect = 4e-06
 Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 14/87 (16%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFEN-------EVLLIA 555
           E +   +KLGEG +  VYKG        +A K +       +E  E        EV L+ 
Sbjct: 2   ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIR------LEHEEGAPCTAIREVSLLK 55

Query: 556 KLQHRNLVKLIGCCTQRDERMLIYEYL 582
            L+H N+V L           L++EYL
Sbjct: 56  DLKHANIVTLHDIIHTEKSLTLVFEYL 82

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 48.1 bits (115), Expect = 5e-06
 Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 13/82 (15%)

Query: 499 IANATENFSDK----NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEE------- 546
           ++   +   D+      LG G  G V      +  +++A K +SK               
Sbjct: 1   MSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL 60

Query: 547 -FENEVLLIAKLQHRNLVKLIG 567
             E E+ ++ KL H  ++K+  
Sbjct: 61  NVETEIEILKKLNHPCIIKIKN 82

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 47.8 bits (114), Expect = 6e-06
 Identities = 23/149 (15%), Positives = 52/149 (34%), Gaps = 13/149 (8%)

Query: 462 KRRHRKQGKTDGSSKLDYNDRGNREEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVY 521
                +  K + +      +   +    E  + DW A     + +  K+ +G G    V 
Sbjct: 52  ANLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVR 111

Query: 522 KGVLIE-GQEIAAKRLSKSSGQG--------MEEFENEVLLIAKL-QHRNLVKLIGCCTQ 571
           + V    G E A K +  ++ +          E    E  ++ ++  H +++ LI     
Sbjct: 112 RCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES 171

Query: 572 RDERMLIYEYLPNKSLNDFIF--GFLYTE 598
                L+++ +    L D++       +E
Sbjct: 172 SSFMFLVFDLMRKGELFDYLTEKVA-LSE 199

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 47.8 bits (114), Expect = 7e-06
 Identities = 19/102 (18%), Positives = 37/102 (36%), Gaps = 14/102 (13%)

Query: 503 TENFSDK----NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEE--------FEN 549
            +   D+      LG G  G V      +  +++A + +SK                 E 
Sbjct: 130 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVET 189

Query: 550 EVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           E+ ++ KL H  ++K+       D   ++ E +    L D +
Sbjct: 190 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKV 230

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 46.4 bits (111), Expect = 1e-05
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 4/92 (4%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEE-FENEVLLIAKLQH 559
           E+F     LG+G FG VY     +    +A K L K+     G+E     EV + + L+H
Sbjct: 9   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68

Query: 560 RNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
            N+++L G         LI EY P  ++   +
Sbjct: 69  PNILRLYGYFHDATRVYLILEYAPLGTVYREL 100

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 24/109 (22%), Positives = 40/109 (36%), Gaps = 9/109 (8%)

Query: 504 ENFSDKNKLGEGGFGPVYKGV-LIEGQEIAAKRLSKSSGQGMEEFE--NEVLLIAKL-QH 559
           ++F   ++LG G +G V+K     +G+  A KR         +      EV    K+ QH
Sbjct: 57  QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116

Query: 560 RNLVKLIGCCTQRDERMLIY-EYLPNKSLNDFI--FGFLYTEHFFWSFF 605
              V+L     +    + +  E     SL      +G    E   W + 
Sbjct: 117 PCCVRLEQ-AWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYL 163

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 45.0 bits (107), Expect = 4e-05
 Identities = 22/89 (24%), Positives = 31/89 (34%), Gaps = 12/89 (13%)

Query: 503 TENFSD-------KNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLI 554
              F            LGEG F    K V  +  Q  A K +SK         + E+  +
Sbjct: 3   DSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM---EANTQKEITAL 59

Query: 555 AKLQ-HRNLVKLIGCCTQRDERMLIYEYL 582
              + H N+VKL      +    L+ E L
Sbjct: 60  KLCEGHPNIVKLHEVFHDQLHTFLVMELL 88

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 44.9 bits (107), Expect = 5e-05
 Identities = 20/96 (20%), Positives = 39/96 (40%), Gaps = 23/96 (23%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAA-KRLSKSSGQGMEEFEN--------EVLLI 554
             +    K+G+G FG V+K    +  +  A K++       ME  +         E+ ++
Sbjct: 17  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL------MENEKEGFPITALREIKIL 70

Query: 555 AKLQHRNLVKLIGCCTQRDERM--------LIYEYL 582
             L+H N+V LI  C  +            L++++ 
Sbjct: 71  QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFC 106

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 44.7 bits (105), Expect = 5e-05
 Identities = 10/62 (16%), Positives = 19/62 (30%), Gaps = 4/62 (6%)

Query: 512 LGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIG 567
           L  G    V+    +E  ++ A K  +     S   +E         A+L   +  +   
Sbjct: 70  LRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARD 129

Query: 568 CC 569
             
Sbjct: 130 RR 131

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 44.4 bits (105), Expect = 8e-05
 Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 21/84 (25%)

Query: 511 KLGEGGFGPVYKGVLIE---GQEIAAKRLSKSSGQGMEEFEN-------EVLLIAKLQHR 560
           K+G G +G VYK    +    ++ A K++         E          E+ L+ +L+H 
Sbjct: 28  KVGRGTYGHVYKAKRKDGKDDKDYALKQI---------EGTGISMSACREIALLRELKHP 78

Query: 561 NLVKLIGCCTQRDER--MLIYEYL 582
           N++ L        +R   L+++Y 
Sbjct: 79  NVISLQKVFLSHADRKVWLLFDYA 102

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 44.1 bits (104), Expect = 1e-04
 Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 8/91 (8%)

Query: 511 KLGEGGFGPVYKGV--LIEGQEIAAKRLSKSSGQGMEE-FENEVLLIAKLQHRNLVKL-- 565
            +  GG G +Y  +   + G+ +  K L  S     +     E   +A++ H ++V++  
Sbjct: 87  CIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFN 146

Query: 566 IGCCTQRDERMLIY---EYLPNKSLNDFIFG 593
               T R    + Y   EY+  +SL      
Sbjct: 147 FVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ 177

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 16/72 (22%), Positives = 24/72 (33%), Gaps = 12/72 (16%)

Query: 503 TENFSD-----KNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEV-LLIA 555
               +D     K  LG G  G V +      GQ+ A K L  S      +   EV     
Sbjct: 23  KYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQ 77

Query: 556 KLQHRNLVKLIG 567
                ++V ++ 
Sbjct: 78  ASGGPHIVCILD 89

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 42.8 bits (101), Expect = 2e-04
 Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 7/62 (11%)

Query: 508 DKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEV-LLIAKLQHRNLVKL 565
               LG G  G V +       ++ A K L         +   EV L     Q  ++V++
Sbjct: 66  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRI 120

Query: 566 IG 567
           + 
Sbjct: 121 VD 122

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 7/61 (11%)

Query: 509 KNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEV-LLIAKLQHRNLVKLI 566
              LG G  G V +       ++ A K L         +   EV L     Q  ++V+++
Sbjct: 23  SQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIV 77

Query: 567 G 567
            
Sbjct: 78  D 78

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 41.4 bits (98), Expect = 5e-04
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)

Query: 512 LGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEE-FENEVLLIAKLQHRNLVKLIG 567
           LG+G FG VY     +    +A K L KS    +G+E     E+ + + L+H N++++  
Sbjct: 22  LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81

Query: 568 CCTQRDERMLIYEYLPNKSLNDFI 591
               R    L+ E+ P   L   +
Sbjct: 82  YFHDRKRIYLMLEFAPRGELYKEL 105

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 41.2 bits (97), Expect = 6e-04
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 10/90 (11%)

Query: 512 LGEGGFGPVYKGV-LIEGQEIAAKRLSKSSGQGMEEFEN------EVLLIAKLQHR--NL 562
           LG GGFG VY G+ + +   +A K + K       E  N      EV+L+ K+      +
Sbjct: 51  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110

Query: 563 VKLIGCCTQRDERMLIYEY-LPNKSLNDFI 591
           ++L+    + D  +LI E   P + L DFI
Sbjct: 111 IRLLDWFERPDSFVLILERPEPVQDLFDFI 140

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 41.0 bits (97), Expect = 7e-04
 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 2/82 (2%)

Query: 512 LGEGGFGPVYKGV-LIEGQEIAAKRLSKSSGQGMEE-FENEVLLIAKLQHRNLVKLIGCC 569
           LGEG +G V   V  +  + +A K +         E  + E+ +   L H N+VK  G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74

Query: 570 TQRDERMLIYEYLPNKSLNDFI 591
            + + + L  EY     L D I
Sbjct: 75  REGNIQYLFLEYCSGGELFDRI 96

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236

 Score = 40.3 bits (93), Expect = 9e-04
 Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 4/65 (6%)

Query: 64  NGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLES 123
               +W  N     +     L    Q N  + +L + N  VW+S  SR+A   V VL   
Sbjct: 167 RDDRVWSTNTAGKGTGCRAVL----QPNGRMDVLTNQNIAVWTSGNSRSAGRYVFVLQPD 222

Query: 124 GNLVV 128
            NL +
Sbjct: 223 RNLAI 227

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	617
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	100.0
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	100.0
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	99.84
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	99.83
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	99.83
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	99.81
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.8
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.8
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.79
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.78
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.73
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	99.72
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.72
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.71
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.7
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.69
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.69
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.68
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.67
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.66
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	99.66
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.64
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.62
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	99.62
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.61
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.6
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	99.59
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	99.59
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.57
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.54
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.53
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	99.53
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.52
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.51
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	99.51
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.5
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.49
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.49
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.47
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.46
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.46
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.45
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.45
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.44
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.44
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.43
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.42
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.42
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.42
3uqc_A	286	Probable conserved transmembrane protein; structur	99.42
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.41
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.41
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.41
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.41
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.41
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.4
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.4
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.4
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.4
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.4
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.39
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.39
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.39
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.39
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	99.39
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.39
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.39
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.39
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.39
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.38
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.38
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.38
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.38
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.38
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.38
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.37
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.37
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.37
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.36
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.36
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.36
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.36
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.36
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.35
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.35
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.35
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.35
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.35
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.35
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.35
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.35
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.34
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.34
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.34
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.34
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.34
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.34
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.34
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.34
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.34
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.33
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.33
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.33
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.33
3niz_A	311	Rhodanese family protein; structural genomics, str	99.33
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.33
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.33
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.32
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.32
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.32
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.32
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.32
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.32
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.31
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.31
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.31
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.31
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.31
3bhy_A	283	Death-associated protein kinase 3; death associate	99.31
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.31
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.3
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.3
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.3
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.3
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.3
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.3
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.3
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.3
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.3
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.3
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.3
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.3
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.3
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.3
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.3
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.29
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.29
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.29
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.29
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.29
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.29
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.29
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.29
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.29
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.29
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.29
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.28
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.28
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.28
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.28
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.28
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.28
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.28
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.28
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.28
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.28
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.28
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.27
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.27
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.27
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.27
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.27
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.27
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.27
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.27
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.27
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.27
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.27
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.27
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.27
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.27
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.27
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.26
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.26
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.26
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.26
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.26
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.26
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.26
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.25
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.25
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.25
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.25
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.24
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.24
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.24
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.24
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.24
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.24
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.24
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.23
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.23
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.23
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.23
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.23
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.23
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.23
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.23
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.22
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.22
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.22
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.22
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.21
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.21
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	99.21
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.21
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.21
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.21
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.21
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.21
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.2
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.2
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.2
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.2
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.2
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.19
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.19
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.19
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.19
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.18
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	99.18
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.18
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.18
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.18
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.17
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.16
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.16
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.16
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.16
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.15
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.15
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.15
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.15
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.14
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.14
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.14
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.14
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.13
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.13
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.12
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.12
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.11
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.11
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.11
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.11
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.11
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.11
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	99.11
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.1
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.1
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.1
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.09
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.09
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.08
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.06
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.06
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.06
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.05
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.05
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.04
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.02
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.02
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.02
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.01
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.0
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	98.99
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.99
2dyl_A	318	Dual specificity mitogen-activated protein kinase	98.99
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	98.99
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.97
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.97
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	98.96
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.94
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	98.87
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	98.66
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	98.62
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.51
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	98.5
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.39
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	96.72
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.64
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	95.52
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	91.03
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	90.44
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	88.33
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	86.24
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	85.55
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	84.0
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	83.69
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	83.57
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	81.89

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=100.00  E-value=8e-44  Score=357.49  Aligned_cols=233  Identities=18%  Similarity=0.220  Sum_probs=180.7

Q ss_pred             cccccccccCCCcccCCCEEEeCCCeEEEEeeCCCCCCCcEEEEEecccCCCcEEEEcCCCCCCCCC----CceEEEeec
Q 007129           14 TATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDR----SGALNISSQ   89 (617)
Q Consensus        14 ~~~~~~~l~~g~~l~~~~~lvS~~g~F~~GF~~~~~~~~~~lgIw~~~~~~~tvVW~ANr~~pv~~~----~~~l~l~~~   89 (617)
                      ++++.|+|++|++|+++++||||+|+|+||||+++   +.||   |+  +.+ |||+||||+|+.++    +++|+|+.|
T Consensus        10 ~~~~~~~l~~g~~l~~~~~l~S~~g~F~lgf~~~~---~~~l---y~--~~~-vvW~Anr~~p~~~~~~~~~~~l~l~~~   80 (276)
T 3m7h_A           10 NGVGTSVLPAYQTLSAGQYLLSPNQRFKLLLQGDG---NLVI---QD--NGA-TVWVANEQQPFSSTIPLRNKKAPLAFY   80 (276)
T ss_dssp             CCTTSSEECTTEEBCTTCEEECTTSSEEEEECTTS---CEEE---EE--TTE-EEEECSTTSTTEEEEECCCTTCCSEEE
T ss_pred             ccccCCEecCCCEecCCCEEEcCCCcEEEEEECCC---CeEE---EC--CCC-eEEECCCCCCcCCcccccceEEEEeCC
Confidence            45678999999999999999999999999999543   5676   76  677 99999999999874    789999999


Q ss_pred             CCceEEE--ecCCCcEEEEecCCCC-----CCCceEEEecCCCEEEecCCCCCCCcceEeecCCCcccccCCceeeeeee
Q 007129           90 GNATLVL--LNSTNGIVWSSNASRT-----ARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLV  162 (617)
Q Consensus        90 G~~~L~l--~d~~~~~vWss~~~~~-----~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~PtDTlLpgq~L~~~~~  162 (617)
                      |+  |+|  .|++|++||+|++...     ..+.+|+|+|+|||||+|      +.+||||  ||||||||||+|+.++.
T Consensus        81 G~--Lvl~~~~~~~~~vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~------~~~lWqS--~ptdtlLpg~~~~~~l~  150 (276)
T 3m7h_A           81 VQ--YGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD------SLALWNG--TPAIPLVPGAIDSLLLA  150 (276)
T ss_dssp             ES--SSEEEEEGGGTEEEEECCCCCCCTTHHHHEEEEECTTSCEEEEE------EEEEEES--CTTSCCCCSCTTCEEEC
T ss_pred             Cc--EEEEEeCCCCCEEEEeCCCcccccccCCceEEEEeCCCCEEecC------CceeeCc--ccccccccccccccccc
Confidence            99  888  8888999999997631     345789999999999997      4589999  99999999999999888


Q ss_pred             cCceeEEEEcccCCCCCCeeeEEEeCCCCCcEEEEEc-CCeeeEeeCCCCCceeecccCCCCCCceEEEEEEcCC-eEEE
Q 007129          163 TGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRK-GSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNEN-EVFY  240 (617)
Q Consensus       163 tg~~~~l~Sw~s~~d~s~G~~~l~~~~~g~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  240 (617)
                      +|..  |   ++.+||++|.|+++|+++|.  +++++ +..+||++|+|++...  ...+....  .+.+.++++ ..++
T Consensus       151 ~g~~--L---~S~~dps~G~fsl~l~~dGn--lvLy~~~~~~yW~Sgt~~~~~~--~l~l~~dG--nLvl~d~~~~~vWs  219 (276)
T 3m7h_A          151 PGSE--L---VQGVVYGAGASKLVFQGDGN--LVAYGPNGAATWNAGTQGKGAV--RAVFQGDG--NLVVYGAGNAVLWH  219 (276)
T ss_dssp             SSEE--E---CTTCEEEETTEEEEECTTSC--EEEECTTSSEEEECCCTTTTCC--EEEECTTS--CEEEECTTSCEEEE
T ss_pred             cCcc--c---ccCCCCCCceEEEeecCCce--EEEEeCCCeEEEECCCCCCccE--EEEEcCCC--eEEEEeCCCcEEEE
Confidence            8765  5   57899999999999999995  34454 4689999999975321  11122222  223333333 3333


Q ss_pred             EEEecCCCceeEEEEccCCCceEEEEecCCCceeeeeccccccc
Q 007129          241 RFNLIKSSVPSMMVMNPLGDPQRLTWMEQTQKWAPFVPFSGLIL  284 (617)
Q Consensus       241 ~~~~~~~~~~~~~~l~~~G~l~~~~w~~~~~~w~~~~~~~~~~~  284 (617)
                      ++.  .....+|++|+.||++++|.|   ...|..+   +.+|.
T Consensus       220 S~t--~~~~~~rl~Ld~dGnLvly~~---~~~Wqsf---~~~P~  255 (276)
T 3m7h_A          220 SHT--GGHASAVLRLQANGSIAILDE---KPVWARF---GFQPT  255 (276)
T ss_dssp             CSC--TTCTTCEEEECTTSCEEEEEE---EEEEESS---SCCTT
T ss_pred             ecC--CCCCCEEEEEcCCccEEEEcC---CCeEEcc---CccCC
Confidence            322  223358999999999999998   3456665   55553

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=100.00  E-value=1.1e-36  Score=300.74  Aligned_cols=217  Identities=17%  Similarity=0.176  Sum_probs=167.0

Q ss_pred             cccccccCCCcccCCCEEEeCCCeEEEEeeCCCCCCCcEEEEEecccCCCcEEEEcCCCCCCCCCCceEEEeecCCceEE
Q 007129           16 TARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLV   95 (617)
Q Consensus        16 ~~~~~l~~g~~l~~~~~lvS~~g~F~~GF~~~~~~~~~~lgIw~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~~~L~   95 (617)
                      ++.|+|.+|++|.++++|  ++|.|+|||+.+++.      ++|..   +|+||+|||+.|   .+++|+|+.|||  ||
T Consensus         6 ~~~~~i~~g~~L~~g~~l--~~g~f~l~f~~~gnl------~ly~~---~~~vW~an~~~~---~~~~l~l~~dGn--Lv   69 (236)
T 1dlp_A            6 GLSHEGSHPQTLHAAQSL--ELSSFRFTMQSDCNL------VLFDS---DVRVWASNTAGA---TGCRAVLQSDGL--LV   69 (236)
T ss_dssp             CSSSSSCSCSCCCTTCEE--CSTTEEEEECTTSCE------EEEES---SSEEECCCCCSC---SCCBCCBCSSSC--BC
T ss_pred             eccceeCCCCEECCCCEE--EcCCEEEEECCCCcE------EEEEC---CEEEEECCCCCC---CCeEEEEcCCCc--EE
Confidence            557999999999999999  599999999876642      24543   799999999988   468999999999  99


Q ss_pred             EecCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecCCCcccc-cCCceeeeee-ecCc-----eeE
Q 007129           96 LLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHIL-IAGMKLGVNL-VTGL-----NRF  168 (617)
Q Consensus        96 l~d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~PtDTl-Lpgq~L~~~~-~tg~-----~~~  168 (617)
                      |+|++|.+||+|++........|+|+|+|||||++.       ++||||||||||+ ||||  +.+. .+|+     ++.
T Consensus        70 l~d~~~~~vW~s~~~~~~~~~~~~l~d~Gnlvl~~~-------~~W~S~~~p~~t~~lp~~--g~d~L~~gq~~~~~~~~  140 (236)
T 1dlp_A           70 ILTAQNTIRWSSGTKGSIGNYVLVLQPDRTVTIYGP-------GLWDSGTSNKGSVVVANN--GNSILYSTQGNDNHPQT  140 (236)
T ss_dssp             CBCTTTCCSCCCCCCCCSSCCEEEECSSSCEEEECS-------EEEECSCCCSSCCCCSSC--CCEECCCC--CCCCCCE
T ss_pred             EEcCCCcEEEeCCccccCCcEEEEEeCCCCEEEecC-------CEEECCCCCCcccccCCc--cceEEecCCcCCCccce
Confidence            999999999999986434456899999999999952       7999999999877 5655  4443 4444     557


Q ss_pred             EEEcccCCCCCCeeeEEEeCCCCCcEEEEEcCCeeeEeeCCCCCceeecccCCCCCCceEEEEEEcCCeEEEEEEecCCC
Q 007129          169 ISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNGLHWTGMPQLQPNPVYTFEYVSNENEVFYRFNLIKSS  248 (617)
Q Consensus       169 l~Sw~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (617)
                      |+   +.+||++|.|+|+++++|  +++++++..+||++++|++. +...+++..... .+.+..++.+.+.++.... .
T Consensus       141 L~---s~~d~s~G~~~l~l~~dG--~LvL~~~~~~~W~s~~~~~~-~~~~~~L~~~Gn-l~ly~~~~~~vw~s~~~~~-~  212 (236)
T 1dlp_A          141 LH---ATQSLQLSPYRLSMETDC--NLVLFDRDDRVWSTNTAGKG-TGCRAVLQPNGR-MDVLTNQNIAVWTSGNSRS-A  212 (236)
T ss_dssp             EC---SSCCCBCSSCEEEEETTT--EEEEEBTTBCCSCCCCCSSC-SSCEEEEETTTE-EEEEETTTEEEEECCCCCS-S
T ss_pred             EE---cCcEeecCcEEEEECCCC--cEEEEcCCEeEEeCCCcCCC-CceEEEECCCCc-EEEEeCCCcEEEEeCCCCC-C
Confidence            77   478999999999999999  67778887899999999753 455566654442 2233333444454444333 2


Q ss_pred             ceeEEEEccCCCceEEE
Q 007129          249 VPSMMVMNPLGDPQRLT  265 (617)
Q Consensus       249 ~~~~~~l~~~G~l~~~~  265 (617)
                      ..+|++|++||++++|.
T Consensus       213 ~~~rl~Ld~dG~l~ly~  229 (236)
T 1dlp_A          213 GRYVFVLQPDRNLAIYG  229 (236)
T ss_dssp             SCCEEEECSSSCEEEEC
T ss_pred             CCEEEEEcCCCcEEEeC
Confidence            46899999999999994

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=99.84  E-value=2e-20  Score=163.05  Aligned_cols=108  Identities=21%  Similarity=0.331  Sum_probs=93.4

Q ss_pred             cccccccCCCcccCCCEEE--eCCCeEEEEeeCCCCCCCcEEEEEecccCCCcEEEEcCCCCCCCCCCceEEEeecCCce
Q 007129           16 TARDTLNLGQSIRDGETLV--SANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNAT   93 (617)
Q Consensus        16 ~~~~~l~~g~~l~~~~~lv--S~~g~F~~GF~~~~~~~~~~lgIw~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~~~   93 (617)
                      ++.++|.+|++|.+|++|+  |++|.|+|+|+.+++-      +||++   +++||+|||+.|  +.++.|+|..|||  
T Consensus         6 ~~~~~l~~g~~L~~g~~l~~~S~~g~~~L~~~~dgnl------vly~~---~~~vW~sn~~~~--~~~~~l~l~~dGN--   72 (119)
T 1b2p_A            6 SKQPDDNHPQILHATESLEILFGTHVYRFIMQTDCNL------VLYDN---NNPIWATNTGGL--GNGCRAVLQPDGV--   72 (119)
T ss_dssp             CSCSSSCCCCEEETTCEEEEEETTEEEEEEECTTSCE------EEEET---TEEEEECCCTTS--CSSCEEEECTTSC--
T ss_pred             ecCcccCCCCEEcCCCEEEEeCCCCCEEEEEecCCCE------EEEEC---CEEEEeCCCccC--CCceEEEEccCCE--
Confidence            4578999999999999999  9999999999998751      58875   799999999877  2357899999999  


Q ss_pred             EEEecCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEee
Q 007129           94 LVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQS  143 (617)
Q Consensus        94 L~l~d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqS  143 (617)
                      |||+|.++.++|+|++....+...++|+|+|||||++.       ++|||
T Consensus        73 LVl~d~~~~~lW~S~~~~~~g~~~l~l~~~Gnlvl~~~-------~~W~S  115 (119)
T 1b2p_A           73 LVVITNENVTVWQSPVAGKAGHYVLVLQPDRNVVIYGD-------ALWAT  115 (119)
T ss_dssp             EEEECTTCCEEEECSCCCCSSCEEEEECTTSCEEEEES-------EEEEC
T ss_pred             EEEEeCCCcEEEcCCCCCCCCCEEEEEECCCcEEEECc-------cEeCC
Confidence            99999999999999976444456799999999999972       69998

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=99.83  E-value=3.2e-20  Score=159.71  Aligned_cols=110  Identities=22%  Similarity=0.427  Sum_probs=94.2

Q ss_pred             cccccCCCcccCCCEEEeCCCeEEEEeeCCCCCCCcEEEEEecccCCCcEEEEcCCCCCCCCCCceEEEeecCCceEEEe
Q 007129           18 RDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLL   97 (617)
Q Consensus        18 ~~~l~~g~~l~~~~~lvS~~g~F~~GF~~~~~~~~~~lgIw~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~~~L~l~   97 (617)
                      +|+|.+|+.|..+++|+ ++|.|+|+|+..|+-      |+|.   .+++||+||++.|.  .++.+.|..|||  |||+
T Consensus         1 ~d~l~~g~~L~~g~~l~-~~~~~~l~~~~dGnl------vl~~---~~~~vW~sn~~~~~--~~~~l~l~~dGN--LVl~   66 (110)
T 3a0c_A            1 VNSLSSPNSLFTGHSLE-VGPSYRLIMQGDCNF------VLYD---SGKPVWASNTGGLG--SGCRLTLHNNGN--LVIY   66 (110)
T ss_dssp             CCEEETTCEECTTCEEE-ETTTEEEEECTTSCE------EEEE---TTEEEEECCCTTSC--SSCEEEECTTSC--EEEE
T ss_pred             CCEeCCCCEECCCCEEE-ECCCEEEEEcCCCcE------EEEE---CCEEEEECCCCCCC--CcEEEEEeCCCC--EEEE
Confidence            47899999999999999 999999999887762      6786   37999999998773  347899999999  9999


Q ss_pred             cCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecCCCc
Q 007129           98 NSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPS  148 (617)
Q Consensus        98 d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~Pt  148 (617)
                      |.++.++|+|++........++|+|+|||||++.       .+||||+||.
T Consensus        67 ~~~~~~~W~S~t~~~~g~~~l~l~~dGnlvl~~~-------~~W~S~~~~~  110 (110)
T 3a0c_A           67 DQSNRVIWQTKTNGKEDHYVLVLQQDRNVVIYGP-------VVWATGSGPA  110 (110)
T ss_dssp             CTTCCEEEECCCCCSSSCCEEEECTTSCEEEECS-------EEEECSCCC-
T ss_pred             CCCCcEEEecCCCCCCCCEEEEEeCCccEEEECC-------CEecCCCcCC
Confidence            9999999999986444456799999999999862       6999999983

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=99.83  E-value=3.8e-20  Score=157.51  Aligned_cols=105  Identities=21%  Similarity=0.453  Sum_probs=89.4

Q ss_pred             cccccCCCcccCCCEEEeCCCeEEEEeeCCCCCCCcEEEEEecccCCCcEEEEcCCCCCCCCCCceEEEeecCCceEEEe
Q 007129           18 RDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLL   97 (617)
Q Consensus        18 ~~~l~~g~~l~~~~~lvS~~g~F~~GF~~~~~~~~~~lgIw~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~~~L~l~   97 (617)
                      .++|.+|+.|..|++|+|  |.|.|.|...++     |.++.    ..++||+|||+.|... .+.|+|+.|||  |+|+
T Consensus         1 kn~L~~g~~L~~g~~L~s--g~y~l~~q~DgN-----Lvly~----~~~~vW~ant~~~~~~-~~~L~l~~dGn--LvL~   66 (105)
T 4h3o_A            1 RNILDNNEGLYAGQSLDV--EPYHFIMQDDCN-----LVLYD----HSTSTWASNTEIGGKS-GCSAVLQSDGN--FVVY   66 (105)
T ss_dssp             CCEECTTEEECTTCEEEE--TTEEEEECTTSC-----EEEEE----TTEEEEECCCCCTTCC-SCEEEECTTSC--EEEE
T ss_pred             CCCcCCCCEEcCCCEEEE--CCEEEEECCCCe-----EEEEE----CCEEEEEecCCCCCCc-cEEEEEeCCcc--EEEE
Confidence            368999999999999998  889999987765     34433    4689999999999764 47899999999  9999


Q ss_pred             cCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEee
Q 007129           98 NSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQS  143 (617)
Q Consensus        98 d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqS  143 (617)
                      |+++.+||+|++.......+|+|+|+|||||++.       .||||
T Consensus        67 d~~~~~vWss~t~~~~~~~~l~L~ddGNlVly~~-------~~W~S  105 (105)
T 4h3o_A           67 DSSGRSLWASHSTRGSGNYILILQDDGNVIIYGS-------DIWST  105 (105)
T ss_dssp             CTTCCEEEECCCCCCSSCEEEEECTTSCEEEEES-------EEEEC
T ss_pred             CCCcEEEEEecCCCCCCCEEEEEeCCCeEEEECC-------cEecC
Confidence            9999999999987555567899999999999963       49998

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=99.81  E-value=1.8e-19  Score=156.44  Aligned_cols=110  Identities=25%  Similarity=0.395  Sum_probs=92.9

Q ss_pred             cccccCCCcccCCCEEEeCCCeEEEEeeCCCCCCCcEEEEEecccCCCcEEEEcCCCCCCCCCCceEEEeecCCceEEEe
Q 007129           18 RDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLL   97 (617)
Q Consensus        18 ~~~l~~g~~l~~~~~lvS~~g~F~~GF~~~~~~~~~~lgIw~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~~~L~l~   97 (617)
                      .|+|.+||+|..+++|+  +|.|+|+|+.+++   .   ++|.   .+++||+|||+.|.  .++.|+|..+||  |+|+
T Consensus         2 ~dtl~~gq~L~~g~~L~--~g~~~L~~~~dgn---l---vly~---~~~~vW~sn~~~~~--~~~~l~l~~~Gn--Lvl~   66 (115)
T 2dpf_A            2 DNVLLSGQTLHADHSLQ--AGAYTLTIQNKCN---L---VKYQ---NGRQIWASNTDRRG--SGCRLTLLSDGN--LVIY   66 (115)
T ss_dssp             CCEEETTCEEETTEEEE--ETTEEEEECTTSC---E---EEEE---TTEEEEECSCTTSC--SSCEEEECTTSC--EEEE
T ss_pred             CCEeCCCCEECCCCEEE--CCCEEEEEcCCCc---E---EEEe---CCEEEEeCCCCCCC--CceEEEECCCCc--EEEE
Confidence            48999999999999998  8999999987764   2   3464   47899999999883  357899999999  9999


Q ss_pred             cCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecCCCcc
Q 007129           98 NSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSH  149 (617)
Q Consensus        98 d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~PtD  149 (617)
                      |.++.++|+|++..+.....++|+|+|||||++.       ++||||.++..
T Consensus        67 d~~~~~vW~S~~~~~~g~~~l~l~~dGnlvl~~~-------~~W~S~~~~~~  111 (115)
T 2dpf_A           67 DHNNNDVWGSACWGDNGKYALVLQKDGRFVIYGP-------VLWSLGPNGCR  111 (115)
T ss_dssp             CTTCCEEEECCCCCSSSCCEEEECTTSCEEEECS-------EEECSSTTCBC
T ss_pred             CCCceEEEEcCCCCCCCCEEEEEeCCCeEEEECC-------CEEECCCCCCc
Confidence            9989999999986444456799999999999952       69999998764

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.80  E-value=5.6e-20  Score=187.44  Aligned_cols=114  Identities=30%  Similarity=0.512  Sum_probs=96.7

Q ss_pred             cCCCCcceecccCceeEEEEEEc------CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~------~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      ++|...++||+|+||.||+|.+.      ++..||||+++.......++|.+|+.+|++++|||||+++|+|.++++.+|
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            45677789999999999999874      367899999987777777899999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCC----------CCCcCCHHHHH----------------hhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFL----------YTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~----------~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      |||||++|+|.++|+...          ....|+|.+++                .|+||||||+|
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~N  158 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRN  158 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhh
Confidence            999999999999997642          23457887555                67899999998

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.80  E-value=8.5e-20  Score=188.64  Aligned_cols=114  Identities=27%  Similarity=0.473  Sum_probs=98.7

Q ss_pred             cCCCCcceecccCceeEEEEEEc------CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~------~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      ++|...++||+|+||.||+|.+.      +++.||||+++.......++|.+|+.+|++++|||||+++|+|.+.+..+|
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            45666789999999999999874      367899999987777777899999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCC------------CCcCCHHHHH----------------hhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLY------------TEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~------------~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      |||||++|+|.++|+....            ...|+|.+++                .|+||||||+|
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~N  188 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRN  188 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhh
Confidence            9999999999999986532            2357887665                57899999998

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=99.79  E-value=3.6e-19  Score=153.86  Aligned_cols=110  Identities=23%  Similarity=0.474  Sum_probs=92.2

Q ss_pred             cccccCCCcccCCCEEEeCCCeEEEEeeCCCCCCCcEEEEEecccCCCcEEEEcCCCCCCCCCCceEEEeecCCceEEEe
Q 007129           18 RDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLL   97 (617)
Q Consensus        18 ~~~l~~g~~l~~~~~lvS~~g~F~~GF~~~~~~~~~~lgIw~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~~~L~l~   97 (617)
                      +|+|.+||+|..|++|  ++|.|+|+|+.+++-      ++|.+   +++||+||++.+  +.++.|.|..+||  |||+
T Consensus         1 tdtl~~gq~L~~g~~L--~~~~~~L~~~~dgnl------vl~~~---~~~vW~sn~~~~--~~~~~l~l~~~GN--Lvl~   65 (112)
T 1xd5_A            1 SDRLNSGHQLDTGGSL--AEGGYLFIIQNDCNL------VLYDN---NRAVWASGTNGK--ASGCVLKMQNDGN--LVIY   65 (112)
T ss_dssp             CCEEETTEEECTTCEE--EETTEEEEECTTSCE------EEEET---TEEEEECCCTTS--CSSEEEEECTTSC--EEEE
T ss_pred             CCCCCCCCEECCCCEE--eCCCEEEEEcCCCcE------EEEEC---CEEEEeCCCcCC--CCCEEEEEeCCCC--EEEE
Confidence            4899999999999999  589999999998762      46764   689999999864  3457899999999  9999


Q ss_pred             cCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecCCC
Q 007129           98 NSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYP  147 (617)
Q Consensus        98 d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~P  147 (617)
                      | ++.++|+|.+........++|+++|||||++..    +.++||||+|.
T Consensus        66 d-~~~~~W~S~~~~~~g~~~l~l~~dGnlvl~~~~----~~~~W~S~~~~  110 (112)
T 1xd5_A           66 S-GSRAIWASNTNRQNGNYYLILQRDRNVVIYDNS----NNAIWATHTNV  110 (112)
T ss_dssp             E-TTEEEEECCCCCSCCCCEEEECTTSCEEEECTT----SCEEEECCCCC
T ss_pred             c-CCEEEEECCccCCCCCEEEEEeCCCcEEEECCC----CceEEECCCcc
Confidence            9 788999999764444567999999999999742    56899999985

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.78  E-value=2.5e-19  Score=183.40  Aligned_cols=112  Identities=33%  Similarity=0.461  Sum_probs=93.0

Q ss_pred             CCCcceecccCceeEEEEEEc------CCcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~------~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      +...++||+|+||.||+|.+.      .++.||||+++.. .....++|.+|+.++++++|||||+++|+|.+.++.+||
T Consensus        28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV  107 (308)
T 4gt4_A           28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI  107 (308)
T ss_dssp             EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence            445679999999999999973      3678999999754 334457899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCC-------------CCcCCHHHHH----------------hhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLY-------------TEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~-------------~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      ||||++|+|.++|+....             +..|+|..++                .|+||||||+|
T Consensus       108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~N  175 (308)
T 4gt4_A          108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRN  175 (308)
T ss_dssp             EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccc
Confidence            999999999999975421             2357887655                57899999998

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.73  E-value=7.2e-18  Score=172.04  Aligned_cols=110  Identities=23%  Similarity=0.365  Sum_probs=92.2

Q ss_pred             ccCCCCcceecccCceeEEEEEEcCCcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      .+++...++||+|+||.||+|.+.  ..||||.++..  ..+..++|.+|+.++++++|||||+++|+|.+ +..+||||
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE  111 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ  111 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence            356777889999999999999874  36999998643  34556889999999999999999999999865 56899999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCCHHHH----------------HhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFFWSFF----------------FSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~w~~r----------------~~i~~~~~~~~n  617 (617)
                      ||++|+|.++|+...  ..++|.++                ..|+||||||+|
T Consensus       112 y~~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~N  162 (307)
T 3omv_A          112 WCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNN  162 (307)
T ss_dssp             CCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSS
T ss_pred             cCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHH
Confidence            999999999998653  34677644                488999999999

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=99.72  E-value=2.4e-17  Score=141.51  Aligned_cols=104  Identities=28%  Similarity=0.446  Sum_probs=86.4

Q ss_pred             ccccCCCcccCCCEEEeCCCeEEEEeeCCCCCCCcEEEEEecccCCCcEEEEcCCCCCCCCCCceEEEeecCCceEEEec
Q 007129           19 DTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLN   98 (617)
Q Consensus        19 ~~l~~g~~l~~~~~lvS~~g~F~~GF~~~~~~~~~~lgIw~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~~~L~l~d   98 (617)
                      ++|.+||.|..|++|+  +|.|+|.|+..++   .   +.|..   .++||++|++.+  +.++.|.|..|||  |+|.|
T Consensus         2 ntL~~gq~L~~g~~L~--~g~~~L~~q~dGn---L---vly~~---~~~vW~snt~~~--~~~~~l~l~~dGN--Lvl~~   66 (109)
T 3dzw_A            2 NILYSGETLSPGEFLN--NGRYVFIMQEDCN---L---VLYDV---DKPIWATNTGGL--DRRCHLSMQSDGN--LVVYS   66 (109)
T ss_dssp             CEEETTEEECTTCEEE--ETTEEEEECTTSC---E---EEEET---TEEEEECCCTTS--SSSCEEEECTTSC--EEEEC
T ss_pred             CCcCCCCEeCCCCEEE--CCCEEEEEcCCCc---E---EEEeC---CEEEEECCcccC--CCCEEEEEeCCCC--EEEEC
Confidence            5899999999999997  7999999988775   2   23654   589999999876  2357899999999  99999


Q ss_pred             CCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeec
Q 007129           99 STNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSF  144 (617)
Q Consensus        99 ~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSF  144 (617)
                      .++.++|+|++.......+|+|+|+|||||++.       ++|||=
T Consensus        67 ~~~~~~W~S~t~~~~~~~~~~L~ddGNlvly~~-------~~W~s~  105 (109)
T 3dzw_A           67 PRNNPIWASNTGGENGNYVCVLQKDRNVVIYGT-------ARWATG  105 (109)
T ss_dssp             TTSCEEEECCCCCSSSCEEEEECTTSCEEEEES-------CCCCCC
T ss_pred             CCCCEEEECCCCCCCCCEEEEEeCCCEEEEECC-------CEEeCC
Confidence            989999999986433346799999999999973       589983

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.72  E-value=1.6e-17  Score=172.18  Aligned_cols=113  Identities=21%  Similarity=0.249  Sum_probs=91.1

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ++|...++||+|+||.||++.... |+.||||+++..  .....+.|.+|+.++++++|||||++++++.+.+..+||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            678888999999999999999864 899999999643  34456789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCc----------------CCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEH----------------FFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~----------------l~w~~r~~i~~~~~~~~n  617 (617)
                      |+++|+|.++|...+. ..                |...+...|+||||||.|
T Consensus       104 y~~gg~L~~~i~~~~~-~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~N  155 (350)
T 4b9d_A          104 YCEGGDLFKRINAQKG-VLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQN  155 (350)
T ss_dssp             CCTTCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGG
T ss_pred             CCCCCcHHHHHHHcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHH
Confidence            9999999999975431 12                334467799999999998

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.71  E-value=1.4e-17  Score=170.43  Aligned_cols=107  Identities=22%  Similarity=0.372  Sum_probs=85.5

Q ss_pred             CCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCC----eEEEEEe
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD----ERMLIYE  580 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~----~~~lv~E  580 (617)
                      ++...++||+|+||.||+|.+ .|+.||||+++... .....+..|+..+.+++|||||+++|+|.+.+    +.+||||
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~-~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E   81 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD   81 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc-hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence            355668999999999999998 68999999996432 11223345666667889999999999998754    5799999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCCHHHHH------------------------hhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFFWSFFF------------------------SFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~w~~r~------------------------~i~~~~~~~~n  617 (617)
                      ||++|+|.++|+..    .++|..++                        .|+||||||+|
T Consensus        82 y~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~N  138 (303)
T 3hmm_A           82 YHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN  138 (303)
T ss_dssp             CCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGG
T ss_pred             CCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCccc
Confidence            99999999999764    37777654                        57899999998

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.70  E-value=9e-18  Score=173.68  Aligned_cols=114  Identities=21%  Similarity=0.272  Sum_probs=97.5

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      ..|...++||+|+||.||++.... |+.||||+++.......+.+.+|+.+|++++|||||++++++.+.+..+||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            457778899999999999999865 8999999997554555677999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++|+|.++|......            ..|...+...||||||||.|
T Consensus       154 ~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~N  200 (346)
T 4fih_A          154 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS  200 (346)
T ss_dssp             TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             CCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHH
Confidence            999999999764321            12445577799999999998

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.69  E-value=2.3e-17  Score=174.87  Aligned_cols=114  Identities=21%  Similarity=0.272  Sum_probs=98.6

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      +.|...++||+|+||.||++.... |+.||||++........+.+.+|+.+|++++|||||++++++...+..+||||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            457778899999999999999865 8999999997655555677999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++|+|.++|...+..            ..|...+...||||||||.|
T Consensus       231 ~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~N  277 (423)
T 4fie_A          231 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS  277 (423)
T ss_dssp             TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTT
T ss_pred             CCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHH
Confidence            999999999754321            12455677899999999998

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.69  E-value=3.8e-17  Score=170.21  Aligned_cols=124  Identities=20%  Similarity=0.329  Sum_probs=99.0

Q ss_pred             cCHHHHHHhccCCCCcceecccCceeEEEEEEcC------CcEEEEeecccCc-hhhHHHHHHHHHHHHccC-CCcccce
Q 007129          494 FDWMAIANATENFSDKNKLGEGGFGPVYKGVLIE------GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQ-HRNLVKL  565 (617)
Q Consensus       494 ~~~~~l~~at~~f~~~~~lG~G~fG~Vykg~l~~------g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~-H~nlv~l  565 (617)
                      ++..+.+...++|...++||+|+||.||+|....      ++.||||+++... ....++|.+|+.+|.++. |||||++
T Consensus        54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l  133 (353)
T 4ase_A           54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL  133 (353)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence            3444445566788889999999999999998753      3579999997543 344578999999999995 4999999


Q ss_pred             EEEEEeC-CeEEEEEeccCCCCHHHHHhcCCC-------------CCcCCHHHHH----------------hhhhccccc
Q 007129          566 IGCCTQR-DERMLIYEYLPNKSLNDFIFGFLY-------------TEHFFWSFFF----------------SFENLSLVD  615 (617)
Q Consensus       566 ~g~~~~~-~~~~lv~E~~~~GsL~~~L~~~~~-------------~~~l~w~~r~----------------~i~~~~~~~  615 (617)
                      +|+|.+. ...+||||||++|+|.++|+....             +..|+|.+++                .|+||||||
T Consensus       134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~  213 (353)
T 4ase_A          134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA  213 (353)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCc
Confidence            9999775 568999999999999999986421             2347776554                578999999


Q ss_pred             CC
Q 007129          616 RN  617 (617)
Q Consensus       616 ~n  617 (617)
                      +|
T Consensus       214 ~N  215 (353)
T 4ase_A          214 RN  215 (353)
T ss_dssp             GG
T ss_pred             cc
Confidence            98

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.68  E-value=8.7e-17  Score=163.95  Aligned_cols=114  Identities=22%  Similarity=0.283  Sum_probs=91.3

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCC--------
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD--------  573 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~--------  573 (617)
                      ++|...++||+|+||.||++.... ++.||||+++... ....+.|.+|+.++++++|||||++++++.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            357778899999999999999764 8999999997443 344578999999999999999999999987544        


Q ss_pred             ----eEEEEEeccCCCCHHHHHhcCCCCCcC----------------CHHHHHhhhhcccccCC
Q 007129          574 ----ERMLIYEYLPNKSLNDFIFGFLYTEHF----------------FWSFFFSFENLSLVDRN  617 (617)
Q Consensus       574 ----~~~lv~E~~~~GsL~~~L~~~~~~~~l----------------~w~~r~~i~~~~~~~~n  617 (617)
                          ..+|||||+++|+|.++|.........                ..-+...|+||||||.|
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~N  148 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSN  148 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHH
Confidence                368999999999999999875432223                33466689999999998

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.67  E-value=8.1e-17  Score=163.00  Aligned_cols=108  Identities=22%  Similarity=0.311  Sum_probs=88.3

Q ss_pred             CCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEe----CCeEEEEE
Q 007129          507 SDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ----RDERMLIY  579 (617)
Q Consensus       507 ~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~----~~~~~lv~  579 (617)
                      ...++||+|+||.||+|.... +..||+|.+...  .....+.|.+|+.++++++|||||++++++..    ....+|||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            345689999999999999865 889999998643  34456789999999999999999999999865    24578999


Q ss_pred             eccCCCCHHHHHhcCCCCCcCCHH----------------HHHh--hhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEHFFWS----------------FFFS--FENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~--i~~~~~~~~n  617 (617)
                      |||++|+|.++|....   .+++.                +...  |+||||||.|
T Consensus       109 Ey~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~N  161 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDN  161 (290)
T ss_dssp             ECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGG
T ss_pred             eCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhh
Confidence            9999999999997643   24443                3334  9999999998

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.66  E-value=4.2e-17  Score=166.16  Aligned_cols=114  Identities=22%  Similarity=0.201  Sum_probs=97.4

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...++||+|+||.||++.... ++.||||.+++.   .....+.+.+|+.++++++|||||++++++.+.+..+|||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            568888999999999999999865 899999999643   2334578999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.++|..... .            ..|...+...|+||||||.|
T Consensus       112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeN  162 (311)
T 4aw0_A          112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN  162 (311)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHH
Confidence            99999999999976432 1            12555678899999999998

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.66  E-value=2.7e-16  Score=134.93  Aligned_cols=104  Identities=19%  Similarity=0.309  Sum_probs=83.7

Q ss_pred             ccccccCCCcccCCCEEEeCCCeEEEEeeCCCCCCCcEEEEEecccCCCcEEEEcCCCCCCCCCCceEEEeecCCceEEE
Q 007129           17 ARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVL   96 (617)
Q Consensus        17 ~~~~l~~g~~l~~~~~lvS~~g~F~~GF~~~~~~~~~~lgIw~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~~~L~l   96 (617)
                      +.|+|.+||.|..|+.|+|.  .|.|-|...++     |.+ |..    ++||++|++..  +.++.|.|..|||  |+|
T Consensus         5 ~~dtL~~gq~L~~g~~L~sg--~~~L~~q~dGn-----Lvl-~~~----~~vW~snt~~~--~~~~~l~l~~dGN--Lvl   68 (110)
T 3r0e_B            5 TNNLLFSGQVLYGDGRLTAK--NHQLVMQGDCN-----LVL-YGG----KYGWQSNTHGN--GEHCFLRLNHKGE--LII   68 (110)
T ss_dssp             BTTEEETTCEEETTEEEECS--SCEEEECTTSC-----EEE-ECS----SSCEECCCTTS--SSSCEEEECTTSC--EEE
T ss_pred             ccCEECCCCEecCCCEEEeC--CEEEEEcCCCe-----EEE-ECC----eEEEECCCcCC--CcCEEEEEeCCCc--EEE
Confidence            57999999999999999984  58887755553     223 643    58999999863  2346899999999  999


Q ss_pred             ecCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEee
Q 007129           97 LNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQS  143 (617)
Q Consensus        97 ~d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqS  143 (617)
                      .|.++.++|+|++.......+|+|+|+|||||++.       .+|+|
T Consensus        69 ~d~~~~~iW~S~t~~~~~~~~~~L~~dGNlvly~~-------~~W~t  108 (110)
T 3r0e_B           69 KDDDFKTIWSSRSSSKQGEYVLILQDDGFGVIYGP-------AIFET  108 (110)
T ss_dssp             ECTTCCEEEECCCCCSSSCCEEEECTTSCEEEECS-------EEEES
T ss_pred             EeCCCCEEEEcCCcCCCCCEEEEEcCCccEEEecC-------CEecC
Confidence            99999999999986433447899999999999972       59987

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.64  E-value=1.4e-16  Score=164.11  Aligned_cols=109  Identities=19%  Similarity=0.181  Sum_probs=90.7

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      +.|...++||+|+||.||++.... |+.||||+++...     .+.+|+.++++++|||||++++++.+.+..+||||||
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  132 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL  132 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence            456667889999999999999865 8999999996432     1247999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++|+|.++|..... .            ..|...+...||||||||.|
T Consensus       133 ~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~N  180 (336)
T 4g3f_A          133 EGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADN  180 (336)
T ss_dssp             TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGG
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHH
Confidence            99999999975431 0            11344467789999999998

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.62  E-value=5e-16  Score=155.89  Aligned_cols=113  Identities=25%  Similarity=0.349  Sum_probs=91.0

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...++||+|+||.||++.... ++.||||.+++..   ....+.|.+|+.++++++|||||++++++.+.+..+|||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            578888999999999999998754 8999999996432   233567999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+ +|+|.++|.....-             ..|...+...|+||||||.|
T Consensus        93 Ey~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~N  142 (275)
T 3hyh_A           93 EYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPEN  142 (275)
T ss_dssp             ECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTT
T ss_pred             eCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHH
Confidence            999 68999999765321             11455577899999999998

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.62  E-value=2.9e-15  Score=129.20  Aligned_cols=107  Identities=19%  Similarity=0.298  Sum_probs=86.5

Q ss_pred             ccccccCCCcccCCCEEEeCCCeEEEEeeCCCCCCCcEEEEEecccCCCcEEEEcCCCCCCCCCCceEEEeecCCceEEE
Q 007129           17 ARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVL   96 (617)
Q Consensus        17 ~~~~l~~g~~l~~~~~lvS~~g~F~~GF~~~~~~~~~~lgIw~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~~~L~l   96 (617)
                      +.|+|.+||.|..++.|.+  |.|.|-|...|+     |.+ |.. ...++||.+|++.+-  .+..|.|..|||  |||
T Consensus         5 ~~~tL~~gq~L~~g~~L~~--g~~~L~~q~dGN-----LvL-~~~-~~~~~vWssnt~~~~--~~~~l~l~~dGN--LVl   71 (113)
T 3mez_B            5 VRNVLFSSQVMYDNAQLAT--RDYSLVMRDDCN-----LVL-TKG-SKTNIVWESGTSGRG--QHCFMRLGHSGE--LDI   71 (113)
T ss_dssp             CSSEEETTCEEETTCEEEE--TTEEEEECTTSC-----EEE-EET-TTTEEEEECCCTTSC--SSCEEEECTTSC--EEE
T ss_pred             cCCEeCCCCEECCCCEeEc--CCEEEEEcCCCE-----EEE-EEC-CCCEEEEECCcccCC--cCEEEEEeCCCc--EEE
Confidence            4689999999999999975  889998877664     333 332 136899999998762  357899999999  999


Q ss_pred             ecCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEee
Q 007129           97 LNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQS  143 (617)
Q Consensus        97 ~d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqS  143 (617)
                      .|.++.++|+|++.......+|+|+|+|||||++.       .+|+|
T Consensus        72 ~d~~~~~iW~S~t~~~~~~~~~~L~~dGnlvly~~-------~~W~s  111 (113)
T 3mez_B           72 TDDRLNTVFVSNTVGQEGDYVLILQINGQAVVYGP-------AVWST  111 (113)
T ss_dssp             ECTTSCEEEECSCCCSSSCCEEEECTTSCEEEECS-------EEEES
T ss_pred             ECCCCCEEEECCCcCCCCCEEEEEcCCceEEEecC-------CEecC
Confidence            99999999999986433457899999999999962       59997

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=99.61  E-value=2.2e-15  Score=129.97  Aligned_cols=96  Identities=22%  Similarity=0.323  Sum_probs=77.3

Q ss_pred             CCCCCCceEEEeecCCceEEEecCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecCCCcccccCCc
Q 007129           76 PLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGM  155 (617)
Q Consensus        76 pv~~~~~~l~l~~~G~~~L~l~d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~PtDTlLpgq  155 (617)
                      |+.+...+|.|..||+  |+|.+. +++||++++........++|+|+|||||++ .    +.++||||+.         
T Consensus        15 ~L~~~~~~L~~~~dgn--lvl~~~-~~~vW~sn~~~~~~~~~l~l~~~GNLvl~d-~----~~~~W~S~~~---------   77 (112)
T 1xd5_A           15 SLAEGGYLFIIQNDCN--LVLYDN-NRAVWASGTNGKASGCVLKMQNDGNLVIYS-G----SRAIWASNTN---------   77 (112)
T ss_dssp             EEEETTEEEEECTTSC--EEEEET-TEEEEECCCTTSCSSEEEEECTTSCEEEEE-T----TEEEEECCCC---------
T ss_pred             EEeCCCEEEEEcCCCc--EEEEEC-CEEEEeCCCcCCCCCEEEEEeCCCCEEEEc-C----CEEEEECCcc---------
Confidence            4434557899999999  999987 789999998633345789999999999998 4    5789999953         


Q ss_pred             eeeeeeecCceeEEEEcccCCCCCCeeeEEEeCCCCCcEEEEEc-CCeeeEeeCCCCC
Q 007129          156 KLGVNLVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRK-GSTIRYRAGSWNG  212 (617)
Q Consensus       156 ~L~~~~~tg~~~~l~Sw~s~~d~s~G~~~l~~~~~g~~~~~~~~-~~~~~~~~g~~~~  212 (617)
                                            +++|.|++.|+++|.  ++++. +..+||++++|+|
T Consensus        78 ----------------------~~~g~~~l~l~~dGn--lvl~~~~~~~~W~S~~~~g  111 (112)
T 1xd5_A           78 ----------------------RQNGNYYLILQRDRN--VVIYDNSNNAIWATHTNVG  111 (112)
T ss_dssp             ----------------------CSCCCCEEEECTTSC--EEEECTTSCEEEECCCCCC
T ss_pred             ----------------------CCCCCEEEEEeCCCc--EEEECCCCceEEECCCccC
Confidence                                  456889999999998  44554 5678999999986

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.60  E-value=1.2e-16  Score=162.59  Aligned_cols=114  Identities=22%  Similarity=0.183  Sum_probs=89.8

Q ss_pred             cCCCCcceecccCceeEEEEEEc----CCcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI----EGQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~----~g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      ++|...++||+|+||.||++...    .++.||||.+++..  ......+.+|+.++++++|||||++++++.+.+..+|
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            46788899999999999999763    26789999996432  2334578999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||||+++|+|.++|..... .            ..|...+...|+||||||.|
T Consensus       104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~N  156 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPEN  156 (304)
T ss_dssp             EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGG
T ss_pred             EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHH
Confidence            9999999999999976432 0            12555688899999999998

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=99.59  E-value=4.3e-15  Score=127.58  Aligned_cols=89  Identities=26%  Similarity=0.391  Sum_probs=72.5

Q ss_pred             CCceEEEeecCCceEEEecCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecCCCcccccCCceeee
Q 007129           80 RSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGV  159 (617)
Q Consensus        80 ~~~~l~l~~~G~~~L~l~d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~PtDTlLpgq~L~~  159 (617)
                      ...+|.|..|||  |+|+| .+++||++++........++|+|+|||||++.+    +.+|||||.              
T Consensus        20 ~~~~l~~~~dGn--lvl~~-~~~~vW~sn~~~~~~~~~l~l~~dGNLVl~~~~----~~~~W~S~t--------------   78 (110)
T 3a0c_A           20 PSYRLIMQGDCN--FVLYD-SGKPVWASNTGGLGSGCRLTLHNNGNLVIYDQS----NRVIWQTKT--------------   78 (110)
T ss_dssp             TTEEEEECTTSC--EEEEE-TTEEEEECCCTTSCSSCEEEECTTSCEEEECTT----CCEEEECCC--------------
T ss_pred             CCEEEEEcCCCc--EEEEE-CCEEEEECCCCCCCCcEEEEEeCCCCEEEECCC----CcEEEecCC--------------
Confidence            357899999999  99998 478999999864334568999999999999863    679999993              


Q ss_pred             eeecCceeEEEEcccCCCCCCeeeEEEeCCCCCcEEEEEcCCeeeEeeCCC
Q 007129          160 NLVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGSW  210 (617)
Q Consensus       160 ~~~tg~~~~l~Sw~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~~~g~~  210 (617)
                                       ++++|.|++.++++|.  ++++++  .||+++++
T Consensus        79 -----------------~~~~g~~~l~l~~dGn--lvl~~~--~~W~S~~~  108 (110)
T 3a0c_A           79 -----------------NGKEDHYVLVLQQDRN--VVIYGP--VVWATGSG  108 (110)
T ss_dssp             -----------------CCSSSCCEEEECTTSC--EEEECS--EEEECSCC
T ss_pred             -----------------CCCCCCEEEEEeCCcc--EEEECC--CEecCCCc
Confidence                             3467899999999997  455554  79998865

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.59  E-value=5.3e-15  Score=126.63  Aligned_cols=108  Identities=26%  Similarity=0.392  Sum_probs=87.0

Q ss_pred             ccccccCCCcccCCCEEEeCCCeEEEEeeCCCCCCCcEEEEEecccCCCcEEEEcCCCCCCCCCCceEEEeecCCceEEE
Q 007129           17 ARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVL   96 (617)
Q Consensus        17 ~~~~l~~g~~l~~~~~lvS~~g~F~~GF~~~~~~~~~~lgIw~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~~~L~l   96 (617)
                      |.|+|.+||.|..|+.|  .+|.|.|.|...++-      +.|..      +|.+|+..+  ..+..|+|..|||  |+|
T Consensus         2 ~~dtL~~gq~L~~g~~L--~~g~~~L~~q~dGNL------vl~~~------~Wssnt~~~--~~~~~l~l~~dGn--Lvl   63 (109)
T 3r0e_A            2 GTNYLLSGQTLDTEGHL--KNGDFDLVMQDDCNL------VLYNG------NWQSNTANN--GRDCKLTLTDYGE--LVI   63 (109)
T ss_dssp             CCSEEETTCEECTTCEE--EETTEEEEECTTSCE------EEETT------TEECCCTTS--CSSCEEEECTTSC--EEE
T ss_pred             ccCCcCCCCCcCCCCEe--ECCCEEEEEecCCeE------EEEeC------eEEcCCCCC--CCcEEEEEcCCCe--EEE
Confidence            57999999999999999  579999999777651      33542      699998865  2357899999999  999


Q ss_pred             ecCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecCCCcccccCC
Q 007129           97 LNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAG  154 (617)
Q Consensus        97 ~d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~PtDTlLpg  154 (617)
                      .|.++.++|+|++.......+|+|+|+|||||++.       .+|+|     .|.+||
T Consensus        64 ~d~~~~~vWss~t~~~~~~~~~~L~~dGNlvly~~-------~~W~s-----~t~~~~  109 (109)
T 3r0e_A           64 KNGDGSTVWKSGAQSVKGNYAAVVHPDGRLVVFGP-------SVFKI-----DPWVRG  109 (109)
T ss_dssp             ECTTSCEEEECCCCCSSSCCEEEEETTTEEEEECS-------EEEEE-----CTTSCC
T ss_pred             EeCCCCEEEcCCCcCCCcCEEEEEcCCCeEEEEec-------CEECC-----CCccCC
Confidence            99999999999986434456899999999999962       59997     555543

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.57  E-value=2.8e-15  Score=166.47  Aligned_cols=114  Identities=22%  Similarity=0.326  Sum_probs=98.1

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      ++|...++||+|+||.||++.... |+.||+|.+........+.+.+|+.+|+.++|||||++++++......+||||||
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            567888999999999999999865 8999999997665566678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++|+|.++|......              ..|...+...|+|+||||.|
T Consensus       237 ~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~N  285 (573)
T 3uto_A          237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPEN  285 (573)
T ss_dssp             CCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             CCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhh
Confidence            999999999754311              11344467789999999998

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.54  E-value=1.1e-14  Score=154.33  Aligned_cols=113  Identities=13%  Similarity=0.221  Sum_probs=92.3

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEe------CCe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ------RDE  574 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~------~~~  574 (617)
                      ++|...++||+|+||.||++.... |+.||||+++..  .....+.+.+|+.+|+.++|||||++++++..      ...
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            467888999999999999999864 899999999643  23445678999999999999999999998764      357


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      .+||||||+ |+|.++|.....-             ..|...+...|+|+||||.|
T Consensus       134 ~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~N  188 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSN  188 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG
T ss_pred             EEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccc
Confidence            899999995 7899999765320             12445577899999999998

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.53  E-value=9.5e-15  Score=150.60  Aligned_cols=128  Identities=35%  Similarity=0.564  Sum_probs=107.9

Q ss_pred             CCCccCHHHHHHhccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCch-hhHHHHHHHHHHHHccCCCcccceEEE
Q 007129          490 ELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSG-QGMEEFENEVLLIAKLQHRNLVKLIGC  568 (617)
Q Consensus       490 ~~~~~~~~~l~~at~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~-~~~~~f~~Ev~~l~~l~H~nlv~l~g~  568 (617)
                      ....+++.++..+.++|...+.||+|+||.||++...+++.||||++..... .....|.+|+.++.+++||||++++++
T Consensus        16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~   95 (326)
T 3uim_A           16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF   95 (326)
T ss_dssp             CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred             ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence            3556889999999999999999999999999999987799999999975432 223479999999999999999999999


Q ss_pred             EEeCCeEEEEEeccCCCCHHHHHhcCCC-CCcCCHHHH----------------H---hhhhcccccCC
Q 007129          569 CTQRDERMLIYEYLPNKSLNDFIFGFLY-TEHFFWSFF----------------F---SFENLSLVDRN  617 (617)
Q Consensus       569 ~~~~~~~~lv~E~~~~GsL~~~L~~~~~-~~~l~w~~r----------------~---~i~~~~~~~~n  617 (617)
                      +......++|+||+++|+|.++|..... ...++|..+                .   .|+|+||||+|
T Consensus        96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~N  164 (326)
T 3uim_A           96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAAN  164 (326)
T ss_dssp             ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGG
T ss_pred             EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhh
Confidence            9999999999999999999999987542 334666544                3   78999999988

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=99.53  E-value=4.7e-14  Score=122.66  Aligned_cols=86  Identities=24%  Similarity=0.345  Sum_probs=70.2

Q ss_pred             ceEEEeecCCceEEEecCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecCCCcccccCCceeeeee
Q 007129           82 GALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNL  161 (617)
Q Consensus        82 ~~l~l~~~G~~~L~l~d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~PtDTlLpgq~L~~~~  161 (617)
                      .+|.+..||+  |+|++. +++||++++........++|+|+|||||+|.+    +.++||||.                
T Consensus        32 ~~L~~~~dgn--lvly~~-~~~vW~sn~~~~~~~~~l~l~~dGNLVl~d~~----~~~lW~S~~----------------   88 (119)
T 1b2p_A           32 YRFIMQTDCN--LVLYDN-NNPIWATNTGGLGNGCRAVLQPDGVLVVITNE----NVTVWQSPV----------------   88 (119)
T ss_dssp             EEEEECTTSC--EEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECTT----CCEEEECSC----------------
T ss_pred             EEEEEecCCC--EEEEEC-CEEEEeCCCccCCCceEEEEccCCEEEEEeCC----CcEEEcCCC----------------
Confidence            5788999999  999987 78999999864334578999999999999853    679999993                


Q ss_pred             ecCceeEEEEcccCCCCCCeeeEEEeCCCCCcEEEEEcCCeeeEeeCC
Q 007129          162 VTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGS  209 (617)
Q Consensus       162 ~tg~~~~l~Sw~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~~~g~  209 (617)
                                     +|++|.|++.++++|.  +++++  ..||++|+
T Consensus        89 ---------------~~~~g~~~l~l~~~Gn--lvl~~--~~~W~Sg~  117 (119)
T 1b2p_A           89 ---------------AGKAGHYVLVLQPDRN--VVIYG--DALWATQT  117 (119)
T ss_dssp             ---------------CCCSSCEEEEECTTSC--EEEEE--SEEEECCC
T ss_pred             ---------------CCCCCCEEEEEECCCc--EEEEC--ccEeCCCC
Confidence                           4567899999999998  44454  38999875

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.52  E-value=7.4e-15  Score=151.21  Aligned_cols=124  Identities=37%  Similarity=0.616  Sum_probs=105.3

Q ss_pred             cCHHHHHHhccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCC
Q 007129          494 FDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD  573 (617)
Q Consensus       494 ~~~~~l~~at~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~  573 (617)
                      +.+.++..++++|...+.||+|+||.||++...+++.||||++........++|.+|+.++..++||||+++++++...+
T Consensus        29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  108 (321)
T 2qkw_B           29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN  108 (321)
T ss_dssp             -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred             ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence            34445566788999999999999999999998779999999987666666789999999999999999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCC-CCcCCHHHH----------------HhhhhcccccCC
Q 007129          574 ERMLIYEYLPNKSLNDFIFGFLY-TEHFFWSFF----------------FSFENLSLVDRN  617 (617)
Q Consensus       574 ~~~lv~E~~~~GsL~~~L~~~~~-~~~l~w~~r----------------~~i~~~~~~~~n  617 (617)
                      ..++|+||+++|+|.++|..... ...++|..+                ..|+|+||||+|
T Consensus       109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~N  169 (321)
T 2qkw_B          109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSIN  169 (321)
T ss_dssp             CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTT
T ss_pred             eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHH
Confidence            99999999999999999976542 224666544                467899999998

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.51  E-value=5.2e-14  Score=143.65  Aligned_cols=127  Identities=34%  Similarity=0.589  Sum_probs=107.3

Q ss_pred             CCCccCHHHHHHhccCCCCc------ceecccCceeEEEEEEcCCcEEEEeecccC----chhhHHHHHHHHHHHHccCC
Q 007129          490 ELPIFDWMAIANATENFSDK------NKLGEGGFGPVYKGVLIEGQEIAAKRLSKS----SGQGMEEFENEVLLIAKLQH  559 (617)
Q Consensus       490 ~~~~~~~~~l~~at~~f~~~------~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~----~~~~~~~f~~Ev~~l~~l~H  559 (617)
                      ....|++.++..++++|...      +.||+|+||.||++.. +++.||||.+...    .....+.|.+|+.++.+++|
T Consensus        11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h   89 (307)
T 2nru_A           11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH   89 (307)
T ss_dssp             CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred             CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence            45678999999999999877      8999999999999986 6889999998642    22345789999999999999


Q ss_pred             CcccceEEEEEeCCeEEEEEeccCCCCHHHHHhcCCCCCcCCHHHH----------------HhhhhcccccCC
Q 007129          560 RNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFF----------------FSFENLSLVDRN  617 (617)
Q Consensus       560 ~nlv~l~g~~~~~~~~~lv~E~~~~GsL~~~L~~~~~~~~l~w~~r----------------~~i~~~~~~~~n  617 (617)
                      |||+++++++...+..++|+||+++|+|.+++........++|..+                ..|+|+||+|+|
T Consensus        90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~N  163 (307)
T 2nru_A           90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSAN  163 (307)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHH
Confidence            9999999999999999999999999999999975433345666644                457899999987

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=99.51  E-value=9.8e-14  Score=120.15  Aligned_cols=90  Identities=26%  Similarity=0.383  Sum_probs=73.6

Q ss_pred             CceEEEeecCCceEEEecCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecCCCcccccCCceeeee
Q 007129           81 SGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVN  160 (617)
Q Consensus        81 ~~~l~l~~~G~~~L~l~d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~PtDTlLpgq~L~~~  160 (617)
                      ..+|.+..||+  |+|.+ .+++||++++........++|+|+|||||+|.+    +.++||||++|             
T Consensus        21 ~~~L~~~~dgn--lvly~-~~~~vW~sn~~~~~~~~~l~l~~~GnLvl~d~~----~~~vW~S~~~~-------------   80 (115)
T 2dpf_A           21 AYTLTIQNKCN--LVKYQ-NGRQIWASNTDRRGSGCRLTLLSDGNLVIYDHN----NNDVWGSACWG-------------   80 (115)
T ss_dssp             TEEEEECTTSC--EEEEE-TTEEEEECSCTTSCSSCEEEECTTSCEEEECTT----CCEEEECCCCC-------------
T ss_pred             CEEEEEcCCCc--EEEEe-CCEEEEeCCCCCCCCceEEEECCCCcEEEECCC----ceEEEEcCCCC-------------
Confidence            46789999999  99998 478999999763334568999999999999853    67899999983             


Q ss_pred             eecCceeEEEEcccCCCCCCeeeEEEeCCCCCcEEEEEcCCeeeEeeCCCCC
Q 007129          161 LVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNG  212 (617)
Q Consensus       161 ~~tg~~~~l~Sw~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~~~g~~~~  212 (617)
                                        ++|.|++.++++|.  +++++.  .||++++|..
T Consensus        81 ------------------~~g~~~l~l~~dGn--lvl~~~--~~W~S~~~~~  110 (115)
T 2dpf_A           81 ------------------DNGKYALVLQKDGR--FVIYGP--VLWSLGPNGC  110 (115)
T ss_dssp             ------------------SSSCCEEEECTTSC--EEEECS--EEECSSTTCB
T ss_pred             ------------------CCCCEEEEEeCCCe--EEEECC--CEEECCCCCC
Confidence                              45788999999997  555554  8999999974

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.50  E-value=3.8e-14  Score=146.11  Aligned_cols=122  Identities=20%  Similarity=0.220  Sum_probs=103.2

Q ss_pred             CccCHHHHHHhccC----------CCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccCCC
Q 007129          492 PIFDWMAIANATEN----------FSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHR  560 (617)
Q Consensus       492 ~~~~~~~l~~at~~----------f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~  560 (617)
                      +.+++++++.+++.          |...++||+|+||.||++... +|+.||||.+........+.+.+|+.++.+++||
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~  102 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF  102 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence            45888888888765          455678999999999999987 4899999999766556678899999999999999


Q ss_pred             cccceEEEEEeCCeEEEEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          561 NLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       561 nlv~l~g~~~~~~~~~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ||+++++++...+..++||||+++|+|.+++....    ++|.                +...|+|+||||+|
T Consensus       103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~N  171 (321)
T 2c30_A          103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR----LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDS  171 (321)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH
Confidence            99999999999999999999999999999986532    4444                44578899999988

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.49  E-value=2.1e-14  Score=150.19  Aligned_cols=114  Identities=19%  Similarity=0.296  Sum_probs=94.0

Q ss_pred             hccCCCCcceecccCceeEEEEEEc----CCcEEEEeecccCchhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEE
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLI----EGQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERM  576 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~----~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~  576 (617)
                      ..+.|...++||+|+||.||++..+    .++.||||.+...  .....+.+|+.++..+ +|||||+++.++...++.+
T Consensus        19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~   96 (361)
T 4f9c_A           19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV   96 (361)
T ss_dssp             GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred             ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence            4567999999999999999999763    2678999998643  2345788999999988 6999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCCCC----------CcCCHHHHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYT----------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~----------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |||||+++|+|.+++..-...          ..|...+...|+||||||.|
T Consensus        97 lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeN  147 (361)
T 4f9c_A           97 IAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSN  147 (361)
T ss_dssp             EEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             EEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHH
Confidence            999999999999998431100          12555678899999999998

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.49  E-value=6.2e-14  Score=143.46  Aligned_cols=112  Identities=25%  Similarity=0.382  Sum_probs=97.4

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      ++|...++||+|+||.||++.... ++.||+|.+........+.|.+|+.++.+++||||+++++++.+....++|+||+
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   89 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI   89 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence            456777899999999999999865 8899999987766677789999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++|+|.+++....  ..++|.                +...|+|+||||+|
T Consensus        90 ~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~N  138 (310)
T 3s95_A           90 KGGTLRGIIKSMD--SQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHN  138 (310)
T ss_dssp             TTCBHHHHHHHCC--TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTS
T ss_pred             CCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCe
Confidence            9999999998643  235555                44567899999998

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.47  E-value=2.4e-14  Score=153.82  Aligned_cols=123  Identities=16%  Similarity=0.142  Sum_probs=100.2

Q ss_pred             CHHHHHHhccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEE
Q 007129          495 DWMAIANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCT  570 (617)
Q Consensus       495 ~~~~l~~at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~  570 (617)
                      .+.++...+++|...++||+|+||.||++.... ++.||+|++++..   ....+.+.+|+.++..++||||+++++++.
T Consensus        65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  144 (437)
T 4aw2_A           65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ  144 (437)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence            345566677889999999999999999999876 7889999996421   122345899999999999999999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          571 QRDERMLIYEYLPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       571 ~~~~~~lv~E~~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +.+..+|||||+++|+|.++|......              ..|...+...|+|+||||+|
T Consensus       145 ~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~N  205 (437)
T 4aw2_A          145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDN  205 (437)
T ss_dssp             CSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             eCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHH
Confidence            999999999999999999999863211              01233356689999999998

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.46  E-value=5.4e-14  Score=156.17  Aligned_cols=115  Identities=20%  Similarity=0.154  Sum_probs=92.4

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHH---HHHHHHHHccCCCcccceEEEEEeCCeE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEF---ENEVLLIAKLQHRNLVKLIGCCTQRDER  575 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f---~~Ev~~l~~l~H~nlv~l~g~~~~~~~~  575 (617)
                      .++|...++||+|+||.||++.... |+.||||.+++..   ......+   +.++.++..++|||||++++++.+.+..
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence            3678888999999999999999875 8999999996421   1222233   3446677788999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|||||+++|+|.++|..... .            ..|...+...||||||||.|
T Consensus       268 ylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeN  322 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPAN  322 (689)
T ss_dssp             EEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGG
T ss_pred             EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHH
Confidence            999999999999999976432 1            12456678899999999998

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.46  E-value=1.3e-13  Score=140.43  Aligned_cols=115  Identities=22%  Similarity=0.349  Sum_probs=97.0

Q ss_pred             ccCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      .+.|...++||+|+||.||++... .++.||||.+........+.+.+|+.++.+++||||+++++++...+..++||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            356888899999999999999864 4889999998755555567899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +++|+|.+++......            ..|..-+...|+|+||||+|
T Consensus        99 ~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~N  146 (297)
T 3fxz_A           99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN  146 (297)
T ss_dssp             CTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             CCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHH
Confidence            9999999999764311            11344466689999999998

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.45  E-value=1e-13  Score=142.03  Aligned_cols=115  Identities=26%  Similarity=0.370  Sum_probs=96.5

Q ss_pred             hccCCCCcceecccCceeEEEEEEcCCcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ..++|...++||+|+||.||++.. .++.||||.+...  .....++|.+|+.++.+++||||+++++++......++|+
T Consensus        35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  113 (309)
T 3p86_A           35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT  113 (309)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred             ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence            346677788999999999999987 6889999998643  2344578999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCcCCHHHHH----------------h--hhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEHFFWSFFF----------------S--FENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~l~w~~r~----------------~--i~~~~~~~~n  617 (617)
                      ||+++|+|.++|........+++..+.                .  |+|+||||+|
T Consensus       114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~N  169 (309)
T 3p86_A          114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPN  169 (309)
T ss_dssp             ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGG
T ss_pred             ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhh
Confidence            999999999999875432336665443                4  9999999998

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.45  E-value=7.4e-14  Score=147.11  Aligned_cols=112  Identities=27%  Similarity=0.421  Sum_probs=94.2

Q ss_pred             cCCCCcceecccCceeEEEEEEc----CCcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI----EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~----~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      ++|...+.||+|+||.||+|...    .+..||||.++.. .....++|.+|+.++.+++||||+++++++......++|
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  124 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV  124 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence            56888899999999999999875    3678999999754 344567899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |||+++|+|.++|....  ..++|.                +...|+|+||||+|
T Consensus       125 ~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N  177 (373)
T 2qol_A          125 TEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN  177 (373)
T ss_dssp             EECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             EeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcce
Confidence            99999999999997643  235555                34468899999998

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.44  E-value=2.4e-13  Score=140.03  Aligned_cols=114  Identities=20%  Similarity=0.239  Sum_probs=92.9

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCC--------
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD--------  573 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~--------  573 (617)
                      ++|...+.||+|+||.||++... +++.||||+++... ....+.+.+|+.++.+++||||+++++++.+..        
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   85 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM   85 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence            45677789999999999999987 58999999997433 344578999999999999999999999987654        


Q ss_pred             -------------------------------------------------eEEEEEeccCCCCHHHHHhcCCCCCcCCH--
Q 007129          574 -------------------------------------------------ERMLIYEYLPNKSLNDFIFGFLYTEHFFW--  602 (617)
Q Consensus       574 -------------------------------------------------~~~lv~E~~~~GsL~~~L~~~~~~~~l~w--  602 (617)
                                                                       ..++||||+++|+|.+++.........++  
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~  165 (332)
T 3qd2_B           86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV  165 (332)
T ss_dssp             HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred             hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence                                                             27899999999999999987644333343  


Q ss_pred             --------------HHHHhhhhcccccCC
Q 007129          603 --------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       603 --------------~~r~~i~~~~~~~~n  617 (617)
                                    -+...|+|+||||.|
T Consensus       166 ~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N  194 (332)
T 3qd2_B          166 CLHIFIQIAEAVEFLHSKGLMHRDLKPSN  194 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             HHHHHHHHHHHHHHHHhCCeeecCCCccc
Confidence                          345689999999998

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.44  E-value=1.5e-13  Score=150.31  Aligned_cols=113  Identities=29%  Similarity=0.464  Sum_probs=96.1

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      .++|...++||+|+||.||+|.... +..||||.++.. ....++|.+|+.++.+++|||||+++++|......+|||||
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~  297 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF  297 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc-ccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence            4557778899999999999999976 889999999754 33467899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +++|+|.++|.... ...+++.                +...|+|+||||+|
T Consensus       298 ~~~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~N  348 (495)
T 1opk_A          298 MTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARN  348 (495)
T ss_dssp             CTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             cCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhh
Confidence            99999999998643 2235554                34468899999998

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.43  E-value=4.5e-14  Score=150.44  Aligned_cols=122  Identities=18%  Similarity=0.151  Sum_probs=99.7

Q ss_pred             HHHHHHhccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEe
Q 007129          496 WMAIANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ  571 (617)
Q Consensus       496 ~~~l~~at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~  571 (617)
                      +.++....++|...++||+|+||.||++.... ++.||+|++++..   ....+.+.+|+.++..++|||||++++++.+
T Consensus        61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~  140 (410)
T 3v8s_A           61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  140 (410)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence            34555567889999999999999999999875 8899999986421   2223458899999999999999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          572 RDERMLIYEYLPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       572 ~~~~~lv~E~~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ....+|||||+++|+|.++|......            ..|...+...|+|+||||.|
T Consensus       141 ~~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~N  198 (410)
T 3v8s_A          141 DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDN  198 (410)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             CCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHH
Confidence            99999999999999999999764321            11344466789999999998

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.42  E-value=2e-13  Score=141.10  Aligned_cols=115  Identities=23%  Similarity=0.320  Sum_probs=96.6

Q ss_pred             ccCCCCcceecccCceeEEEEEEc-CCcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      .++|...+.||+|+||.||++... .|+.||||++...  .....+.+.+|+.++..++||||+++++++...+..++|+
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            456888899999999999999984 5899999998643  3445678999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.++|.....-             ..|..-+...|+|+||||+|
T Consensus        94 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~N  144 (328)
T 3fe3_A           94 EYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAEN  144 (328)
T ss_dssp             CCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             ECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHH
Confidence            999999999999754321             11344567789999999998

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.42  E-value=5.6e-14  Score=149.83  Aligned_cols=123  Identities=16%  Similarity=0.147  Sum_probs=100.1

Q ss_pred             CHHHHHHhccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEE
Q 007129          495 DWMAIANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCT  570 (617)
Q Consensus       495 ~~~~l~~at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~  570 (617)
                      .+.++....++|...++||+|+||.||++.... ++.||+|++++..   ....+.+.+|+.++.+++||||+++++++.
T Consensus        52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  131 (412)
T 2vd5_A           52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ  131 (412)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence            345555667889999999999999999999864 8999999996421   223356899999999999999999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          571 QRDERMLIYEYLPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       571 ~~~~~~lv~E~~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ..+..+|||||+++|+|.++|......              ..|..-+...|+|+||||+|
T Consensus       132 ~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~N  192 (412)
T 2vd5_A          132 DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDN  192 (412)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             eCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHH
Confidence            999999999999999999999753211              01333466689999999998

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.42  E-value=2.1e-13  Score=136.45  Aligned_cols=111  Identities=24%  Similarity=0.389  Sum_probs=94.5

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      ++|...++||+|+||.||++...+++.||+|++... ....++|.+|+.++.+++||||+++++++.+....++||||++
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   88 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   88 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTT-SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             hhceeeheecCCCccEEEEEEecCCCeEEEEEeccc-ccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence            456777899999999999999988889999999753 2345789999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +|+|.+++.....  .+++.                +...|+|+||||+|
T Consensus        89 ~~~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~N  136 (269)
T 4hcu_A           89 HGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARN  136 (269)
T ss_dssp             TCBHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             CCcHHHHHHhcCc--ccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchhe
Confidence            9999999976432  34443                55578999999988

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.42  E-value=2.4e-13  Score=137.77  Aligned_cols=114  Identities=7%  Similarity=0.005  Sum_probs=95.7

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      +.|...+.||+|+||.||++.... ++.||||.+....   ....+.|.+|+..+.+++||||+++++++...+..++||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            457778899999999999999865 8999999997532   334578999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCC-----------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYT-----------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~-----------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++++|.++|......           ..|...+...|+|+||||.|
T Consensus       111 e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~N  159 (286)
T 3uqc_A          111 EWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSR  159 (286)
T ss_dssp             ECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGG
T ss_pred             EecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCccc
Confidence            999999999999543210           11445577799999999998

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.41  E-value=3.1e-13  Score=145.99  Aligned_cols=111  Identities=24%  Similarity=0.359  Sum_probs=93.1

Q ss_pred             ccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCC-eEEEEEec
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD-ERMLIYEY  581 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~-~~~lv~E~  581 (617)
                      .++|...++||+|+||.||+|... ++.||||.++...  ..++|.+|+.++.+++|||||++++++.+.. ..++||||
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~  268 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY  268 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred             hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence            456777889999999999999884 7899999997532  4578999999999999999999999988765 78999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +++|+|.++|.... ...+++.                +...|+|+||||+|
T Consensus       269 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~N  319 (450)
T 1k9a_A          269 MAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARN  319 (450)
T ss_dssp             CTTCBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             cCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhh
Confidence            99999999998653 2234444                44578999999998

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.41  E-value=1.7e-13  Score=148.29  Aligned_cols=114  Identities=26%  Similarity=0.322  Sum_probs=94.8

Q ss_pred             HhccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          501 NATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       501 ~at~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ...++|...++||+|+||.||+|....+..||||.++... ...++|.+|+.++.+++|||||++++++. .+..++|||
T Consensus       185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e  262 (454)
T 1qcf_A          185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE  262 (454)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred             echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence            3456677888999999999999999888899999997543 45688999999999999999999999986 667899999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCCH----------------HHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      |+++|+|.++|.... ...+++                -+...|+|+||||+|
T Consensus       263 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~N  314 (454)
T 1qcf_A          263 FMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAAN  314 (454)
T ss_dssp             CCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGG
T ss_pred             ecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHH
Confidence            999999999997542 112333                355578999999998

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.41  E-value=2.9e-13  Score=135.13  Aligned_cols=112  Identities=22%  Similarity=0.312  Sum_probs=94.1

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeC--CeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR--DERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~--~~~~lv~  579 (617)
                      ++|...+.||+|+||.||++.. .++.||||.+...  .....++|.+|+.++.+++||||+++++++...  ...++|+
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT   88 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence            4567778999999999999998 4889999998743  344557899999999999999999999999876  7789999


Q ss_pred             eccCCCCHHHHHhcCCCCCcCCHHHHH----------------h--hhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEHFFWSFFF----------------S--FENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~l~w~~r~----------------~--i~~~~~~~~n  617 (617)
                      ||+++|+|.++|.... ...+++..+.                .  |+|+||||+|
T Consensus        89 e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~N  143 (271)
T 3kmu_A           89 HWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRS  143 (271)
T ss_dssp             ECCTTCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGG
T ss_pred             cccCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccce
Confidence            9999999999998754 3346666444                4  8999999988

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.41  E-value=1.9e-13  Score=141.11  Aligned_cols=112  Identities=24%  Similarity=0.366  Sum_probs=93.1

Q ss_pred             cCCCCcceecccCceeEEEEEEcC----CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE----GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~----g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      +.|...+.||+|+||.||++....    +..||||.++.. .....++|.+|+.++.+++||||+++++++......++|
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  128 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV  128 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence            345667899999999999999852    456999999754 344567899999999999999999999999998999999


Q ss_pred             EeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |||+++|+|.++|....  ..+++.                +...|+|+||||+|
T Consensus       129 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~N  181 (325)
T 3kul_A          129 TEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARN  181 (325)
T ss_dssp             EECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             eeCCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcce
Confidence            99999999999997643  234444                55578899999988

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.41  E-value=7.7e-14  Score=147.17  Aligned_cols=113  Identities=23%  Similarity=0.344  Sum_probs=94.6

Q ss_pred             ccCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      .++|...++||+|+||.||+|... +++.||||.++... ....++|.+|+.++.+++||||+++++++...+..++|||
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  192 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME  192 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence            356777889999999999999997 48899999987542 3344679999999999999999999999999899999999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |+++|+|.++|....  ..+++.                +...|+|+||||+|
T Consensus       193 ~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~N  243 (377)
T 3cbl_A          193 LVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARN  243 (377)
T ss_dssp             CCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             cCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHH
Confidence            999999999997542  124443                45578899999998

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.40  E-value=2e-13  Score=143.58  Aligned_cols=114  Identities=24%  Similarity=0.423  Sum_probs=94.2

Q ss_pred             cCCCCcceecccCceeEEEEEEc--------CCcEEEEeecccC-chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCC
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI--------EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRD  573 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~--------~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~  573 (617)
                      ++|...+.||+|+||.||++...        .+..||||.++.. .....++|.+|+.++..+ +||||+++++++...+
T Consensus        81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~  160 (370)
T 2psq_A           81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG  160 (370)
T ss_dssp             GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred             HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence            56777889999999999999863        2457999999754 334567899999999999 8999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCC-------------CCcCCHH----------------HHHhhhhcccccCC
Q 007129          574 ERMLIYEYLPNKSLNDFIFGFLY-------------TEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       574 ~~~lv~E~~~~GsL~~~L~~~~~-------------~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ..++|+||+++|+|.++|.....             ...++|.                +...|+|+||||+|
T Consensus       161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  233 (370)
T 2psq_A          161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN  233 (370)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhh
Confidence            99999999999999999986531             1234443                55678999999998

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.40  E-value=3.6e-13  Score=140.61  Aligned_cols=102  Identities=22%  Similarity=0.370  Sum_probs=85.0

Q ss_pred             cCHHHHHHhccCCCCcceecccCceeEEEEEEc------CCcEEEEeecccC-chhhHHHHHHHHHHHHcc-CCCcccce
Q 007129          494 FDWMAIANATENFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKL-QHRNLVKL  565 (617)
Q Consensus       494 ~~~~~l~~at~~f~~~~~lG~G~fG~Vykg~l~------~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~nlv~l  565 (617)
                      +...+.....++|...++||+|+||.||++...      .++.||||+++.. .....+.|.+|+.++.++ +||||+++
T Consensus        12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~   91 (359)
T 3vhe_A           12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   91 (359)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence            445555667788999999999999999999842      2578999999754 334457899999999999 89999999


Q ss_pred             EEEEEeCCe-EEEEEeccCCCCHHHHHhcCC
Q 007129          566 IGCCTQRDE-RMLIYEYLPNKSLNDFIFGFL  595 (617)
Q Consensus       566 ~g~~~~~~~-~~lv~E~~~~GsL~~~L~~~~  595 (617)
                      ++++.+.+. .++||||+++|+|.++|....
T Consensus        92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~  122 (359)
T 3vhe_A           92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKR  122 (359)
T ss_dssp             EEEECSTTSCCEEEEECCTTEEHHHHHHTTT
T ss_pred             eeeeecCCCceEEEEEecCCCcHHHHHHhcc
Confidence            999987554 899999999999999998753

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.40  E-value=7.6e-13  Score=138.63  Aligned_cols=115  Identities=25%  Similarity=0.298  Sum_probs=95.0

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch------hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG------QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDER  575 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~------~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~  575 (617)
                      .+.|...++||+|+||.||++.... |+.||+|.++....      ...+.+.+|+.++.+++||||+++++++......
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            3567778899999999999999865 88999999875322      1357899999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++|+||+++|+|.++|.....-             ..|..-+...|+|+||||.|
T Consensus        91 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~N  145 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPEN  145 (361)
T ss_dssp             EEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH
Confidence            9999999999999999754310             01333456689999999998

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.40  E-value=2.3e-13  Score=147.16  Aligned_cols=113  Identities=27%  Similarity=0.390  Sum_probs=93.5

Q ss_pred             hccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ..++|...++||+|+||.||+|....+..||||.++... ...++|.+|+.++.+++||||+++++++.+ +..++||||
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~  259 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY  259 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence            345677788999999999999999878889999997543 345789999999999999999999999866 678999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +++|+|.++|.... ...+++.                +...|+|+||||+|
T Consensus       260 ~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~N  310 (452)
T 1fmk_A          260 MSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN  310 (452)
T ss_dssp             CTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             hcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhh
Confidence            99999999997532 1224433                55678999999998

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.40  E-value=4.4e-13  Score=141.76  Aligned_cols=112  Identities=25%  Similarity=0.322  Sum_probs=96.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      +.|...++||+|+||.||++.... ++.||+|.+..........+.+|+.++.+++||||+++++++......++||||+
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~  130 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  130 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence            567888899999999999999865 8899999997655556678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++|+|.+++.....  .+++.                +...|+|+||||+|
T Consensus       131 ~gg~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~N  179 (387)
T 1kob_A          131 SGGELFDRIAAEDY--KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPEN  179 (387)
T ss_dssp             CCCBHHHHTTCTTC--CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             CCCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHH
Confidence            99999999976431  23433                55688999999998

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.39  E-value=3.3e-13  Score=136.34  Aligned_cols=112  Identities=27%  Similarity=0.369  Sum_probs=94.8

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-C-------cEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-G-------QEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDER  575 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g-------~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~  575 (617)
                      ++|...+.||+|+||.||++.... +       ..||+|.+........+.|.+|+.++.+++||||+++++++...+..
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN   87 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred             hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence            456777899999999999998754 3       47999999766666678899999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++|+||+++|+|.++|.....  .+++.                +...|+|+||||+|
T Consensus        88 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~N  143 (289)
T 4fvq_A           88 ILVQEFVKFGSLDTYLKKNKN--CINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKN  143 (289)
T ss_dssp             EEEEECCTTCBHHHHHHHTGG--GCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             EEEEECCCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcce
Confidence            999999999999999986532  23433                45578999999998

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.39  E-value=6.3e-13  Score=136.94  Aligned_cols=111  Identities=19%  Similarity=0.283  Sum_probs=94.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      +.|...++||+|+||.||++.... ++.+|+|.+... ....+.+.+|+.++..++||||+++++++......++|+||+
T Consensus         5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~   83 (321)
T 1tki_A            5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence            567778899999999999999865 789999998643 344567899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCH----------------HHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      ++|+|.+++.....  .+++                -+...|+|+||||+|
T Consensus        84 ~g~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~N  132 (321)
T 1tki_A           84 SGLDIFERINTSAF--ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPEN  132 (321)
T ss_dssp             CCCBHHHHHTSSSC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             CCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHH
Confidence            99999999976431  2333                356688999999998

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.39  E-value=4.3e-13  Score=138.16  Aligned_cols=109  Identities=21%  Similarity=0.340  Sum_probs=90.3

Q ss_pred             ccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCC----eEEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD----ERMLI  578 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~----~~~lv  578 (617)
                      .++|...++||+|+||.||++... ++.||||++... ......+..|+.++.+++|||||++++++....    ..++|
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv  100 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ-DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI  100 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG-GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecC-chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence            356778889999999999999874 789999999643 233456677999999999999999999998754    36999


Q ss_pred             EeccCCCCHHHHHhcCCCCCcCCHHHHH--------------------------hhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYTEHFFWSFFF--------------------------SFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~~~l~w~~r~--------------------------~i~~~~~~~~n  617 (617)
                      +||+++|+|.++|....    ++|..+.                          .|+|+||||+|
T Consensus       101 ~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~N  161 (322)
T 3soc_A          101 TAFHEKGSLSDFLKANV----VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKN  161 (322)
T ss_dssp             EECCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGG
T ss_pred             EecCCCCCHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHh
Confidence            99999999999997643    6666543                          78999999998

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.39  E-value=2e-13  Score=138.56  Aligned_cols=112  Identities=30%  Similarity=0.443  Sum_probs=93.6

Q ss_pred             cCCCCcceecccCceeEEEEEEc-----CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeC--CeEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-----EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR--DERM  576 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-----~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~--~~~~  576 (617)
                      ++|...++||+|+||.||++.+.     .++.||||++........+.|.+|+.++.+++||||+++++++...  ...+
T Consensus        10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   89 (295)
T 3ugc_A           10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK   89 (295)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred             HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence            45677789999999999999852     4789999999876666678899999999999999999999998653  5589


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +|+||+++|+|.+++.....  .+++.                +...|+|+||||+|
T Consensus        90 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~N  144 (295)
T 3ugc_A           90 LIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN  144 (295)
T ss_dssp             EEEECCTTCBHHHHHHHCGG--GCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             EEEEeCCCCCHHHHHHhccc--ccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhh
Confidence            99999999999999976532  24444                45578999999998

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.39  E-value=1.5e-12  Score=111.72  Aligned_cols=103  Identities=17%  Similarity=0.257  Sum_probs=81.5

Q ss_pred             cccccCCCcccCCCEEEeCCCeEEEEeeCCCCCCCcEEEEEecccCCCcEEEEcCCCCCCCCCCceEEEeecCCceEEEe
Q 007129           18 RDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLL   97 (617)
Q Consensus        18 ~~~l~~g~~l~~~~~lvS~~g~F~~GF~~~~~~~~~~lgIw~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~~~L~l~   97 (617)
                      .++|.+||.|..|+.|  .+|.|.|.|...++   .   +.|..   .. ||.+|+..+-  ....|.|..|||  |||.
T Consensus         2 ~~~l~~gq~L~~g~~L--~~g~~~L~~q~dGn---L---vl~~~---~~-vW~snt~~~~--~~~~l~l~~dGN--LVl~   65 (111)
T 3mez_A            2 NNVLLTGDVIHTDNQL--SYESAAFVMQGDCN---L---VLYNE---AG-GFQSNTHGRG--VDCTLRLNNRGQ--LEIH   65 (111)
T ss_dssp             TTEEETTCEECTTCEE--EETTEEEEECTTSC---E---EEECS---SC-CEECCCTTSC--SSCEEEECTTSC--EEEE
T ss_pred             cCEeCCCCEeCCCCEE--ecCCEEEEEccCCe---E---EEECC---CC-EEECCcccCC--cCEEEEEcCCCc--EEEE
Confidence            4789999999999999  47899999977665   1   33543   23 9999998762  347899999999  9999


Q ss_pred             cCCCc-EEEEecCC--CCCCCceEEEecCCCEEEecCCCCCCCcceEee
Q 007129           98 NSTNG-IVWSSNAS--RTARNPVAVLLESGNLVVKDGKDIDPDNFLWQS  143 (617)
Q Consensus        98 d~~~~-~vWss~~~--~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqS  143 (617)
                      |.++. ++|+|++.  ......++.|+|+|||||++       ..+|+|
T Consensus        66 ~~~~~~~vW~S~t~~~~~~~~~~l~Lq~dGNlvly~-------~~~W~s  107 (111)
T 3mez_A           66 SANSNTPVWVYPRSVNTVRGNYAATLGPDQHVTIYG-------PAIWST  107 (111)
T ss_dssp             CSSCSSCSEEESSSCCCCSSCCEEEECTTSCEEEEC-------SEEEEC
T ss_pred             eCCCCEEEEEeccccCCCCcCEEEEECCCCeEEEec-------cCEEcc
Confidence            99876 59999963  22345679999999999996       359997

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.39  E-value=3.2e-13  Score=140.16  Aligned_cols=114  Identities=19%  Similarity=0.131  Sum_probs=95.4

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...+.||+|+||.||++.... ++.||+|.+++.   .....+.+.+|+.++.+++||||+++++++...+..++||
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            567778899999999999999865 899999999643   2334577899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.++|..... .            ..|..-+...|+|+||||+|
T Consensus        85 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~N  135 (337)
T 1o6l_A           85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLEN  135 (337)
T ss_dssp             ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHH
Confidence            99999999999975431 0            11344467789999999998

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.39  E-value=3.3e-13  Score=139.93  Aligned_cols=118  Identities=26%  Similarity=0.416  Sum_probs=97.3

Q ss_pred             HHhccCCCCcceecccCceeEEEEEEcC------CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeC
Q 007129          500 ANATENFSDKNKLGEGGFGPVYKGVLIE------GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR  572 (617)
Q Consensus       500 ~~at~~f~~~~~lG~G~fG~Vykg~l~~------g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~  572 (617)
                      ....++|...+.||+|+||.||++....      ++.||||.++.. .....+.|.+|+.++.+++||||+++++++...
T Consensus        43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~  122 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG  122 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence            3456778888999999999999999853      478999999754 334457899999999999999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCCC---------------------CCcCCHH----------------HHHhhhhccccc
Q 007129          573 DERMLIYEYLPNKSLNDFIFGFLY---------------------TEHFFWS----------------FFFSFENLSLVD  615 (617)
Q Consensus       573 ~~~~lv~E~~~~GsL~~~L~~~~~---------------------~~~l~w~----------------~r~~i~~~~~~~  615 (617)
                      +..++|+||+++|+|.++|.....                     ...+++.                +...|+|+||||
T Consensus       123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp  202 (343)
T 1luf_A          123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLAT  202 (343)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCc
Confidence            999999999999999999986421                     1234554                455788999999


Q ss_pred             CC
Q 007129          616 RN  617 (617)
Q Consensus       616 ~n  617 (617)
                      +|
T Consensus       203 ~N  204 (343)
T 1luf_A          203 RN  204 (343)
T ss_dssp             GG
T ss_pred             ce
Confidence            98

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.39  E-value=9.5e-13  Score=139.27  Aligned_cols=114  Identities=13%  Similarity=0.193  Sum_probs=95.7

Q ss_pred             ccCCCCcceeccc--CceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          503 TENFSDKNKLGEG--GFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       503 t~~f~~~~~lG~G--~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      .++|...++||+|  +||.||++.... ++.||||++...  .....+.+.+|+.+++.++|||||++++++...+..++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            3567778899999  999999999874 899999999643  23445778999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCCCCcCCH----------------HHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      |+||+++|+|.+++..... ..+++                -+...|+|+||||+|
T Consensus       104 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~N  158 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTHFM-DGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASH  158 (389)
T ss_dssp             EEECCTTCBHHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             EEEccCCCCHHHHHhhhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence            9999999999999976531 22333                355678999999998

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.38  E-value=9.2e-13  Score=133.84  Aligned_cols=114  Identities=23%  Similarity=0.334  Sum_probs=93.9

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      +.|...++||+|+||.||++.... ++.||+|.+...   .....+.|.+|+.++.+++||||+++++++...+..++||
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   90 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM   90 (294)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence            457778899999999999998754 889999998532   2344578999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.+++..... .            ..|...+...|+|+||||+|
T Consensus        91 e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~N  141 (294)
T 4eqm_A           91 EYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQN  141 (294)
T ss_dssp             ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH
Confidence            99999999999975431 0            01233356678999999998

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.38  E-value=7e-13  Score=139.58  Aligned_cols=107  Identities=27%  Similarity=0.355  Sum_probs=87.1

Q ss_pred             cceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCCH
Q 007129          509 KNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSL  587 (617)
Q Consensus       509 ~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~GsL  587 (617)
                      .+.||+|+||.||++.... ++.||+|.++.......++|.+|+.++.+++||||+++++++...+..+|||||+++|+|
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L  173 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL  173 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence            4679999999999998854 889999999866556678899999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          588 NDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       588 ~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      .++|....  ..+++.                +...|+|+||||+|
T Consensus       174 ~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N  217 (373)
T 2x4f_A          174 FDRIIDES--YNLTELDTILFMKQICEGIRHMHQMYILHLDLKPEN  217 (373)
T ss_dssp             HHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             HHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHH
Confidence            99997642  234444                44568899999998

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.38  E-value=1.1e-12  Score=134.71  Aligned_cols=114  Identities=22%  Similarity=0.218  Sum_probs=94.3

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCC--eEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD--ERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~--~~~lv~  579 (617)
                      +.|...++||+|+||.||++.... ++.||||.++... ....+.+.+|+.++.+++||||+++++++....  ..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            456777899999999999999876 8899999997533 344578899999999999999999999998765  779999


Q ss_pred             eccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.++|........+++.                +...|+|+||||+|
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~N  142 (319)
T 4euu_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGN  142 (319)
T ss_dssp             ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHH
Confidence            999999999999875433335555                44567899999998

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.38  E-value=9.5e-13  Score=138.00  Aligned_cols=115  Identities=25%  Similarity=0.375  Sum_probs=96.0

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      .++|...++||+|+||.||++.... ++.||+|.+...  .....+.+.+|+.++.+++||||+++++++.+....++|+
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            3567888899999999999999865 889999999643  3345578999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.++|.....-             ..|..-+...|+|+||||+|
T Consensus       108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~N  158 (362)
T 2bdw_A          108 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPEN  158 (362)
T ss_dssp             CCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGG
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHH
Confidence            999999999999764320             11334466789999999998

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.38  E-value=9.8e-13  Score=135.76  Aligned_cols=114  Identities=24%  Similarity=0.352  Sum_probs=93.7

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch------hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG------QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERM  576 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~------~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~  576 (617)
                      +.|...+.||+|+||.||++.... ++.||+|.+.....      ...+++.+|+.++.+++||||+++++++......+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            346777899999999999999865 88999999864321      23578999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|+||+++|+|.+++.....-             ..|..-+...|+|+||||+|
T Consensus        91 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~N  144 (326)
T 2y0a_A           91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPEN  144 (326)
T ss_dssp             EEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             EEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHH
Confidence            999999999999999754310             01233356688999999998

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.38  E-value=3e-13  Score=149.36  Aligned_cols=113  Identities=27%  Similarity=0.386  Sum_probs=93.5

Q ss_pred             hccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ..++|...++||+|+||.||+|....+..||||+++... ...++|.+|+.+|.+++|+||+++++++.+ +..+|||||
T Consensus       265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~  342 (535)
T 2h8h_A          265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY  342 (535)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred             chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence            345677788999999999999999878889999997543 345789999999999999999999999866 678999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCH----------------HHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      +++|+|.++|.... ...+++                .+...|+|+||||+|
T Consensus       343 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~N  393 (535)
T 2h8h_A          343 MSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN  393 (535)
T ss_dssp             CTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             hcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhh
Confidence            99999999997531 112333                355678999999998

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.37  E-value=1.7e-12  Score=131.30  Aligned_cols=114  Identities=20%  Similarity=0.273  Sum_probs=93.0

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      +.+.....||+|+||.||++.... ++.||||.+........+.+.+|+.++..++||||+++++++...+..++|+||+
T Consensus        22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  101 (295)
T 2clq_A           22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV  101 (295)
T ss_dssp             CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence            344555689999999999999754 7899999997665556688999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++++|.+++........+++.                +...|+|+||+|+|
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~N  152 (295)
T 2clq_A          102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDN  152 (295)
T ss_dssp             SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhh
Confidence            999999999865333233333                44578899999987

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.37  E-value=8.1e-13  Score=132.65  Aligned_cols=114  Identities=18%  Similarity=0.278  Sum_probs=95.8

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      +.|...++||+|+||.||++.... +..+|+|++........+.|.+|+.++.+++||||+++++++......++|+||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC   88 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence            457777899999999999999866 7789999997655566788999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++++|.+++.....-             ..|..-+...|+|+||+|+|
T Consensus        89 ~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~N  136 (277)
T 3f3z_A           89 TGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPEN  136 (277)
T ss_dssp             CSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHH
Confidence            999999998764310             01333356678999999987

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.37  E-value=4.4e-13  Score=135.06  Aligned_cols=112  Identities=28%  Similarity=0.413  Sum_probs=91.9

Q ss_pred             ccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      .++|...++||+|+||.||++....+..||+|.++... ...++|.+|+.++.+++||||+++++++......++|+||+
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  101 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM  101 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence            45677788999999999999999888899999997542 34578999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++|+|.+++.....  .+++.                +...|+|+||||+|
T Consensus       102 ~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~N  150 (283)
T 3gen_A          102 ANGCLLNYLREMRH--RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN  150 (283)
T ss_dssp             TTCBHHHHHHCGGG--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGG
T ss_pred             CCCcHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccce
Confidence            99999999976321  23433                55578999999988

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.36  E-value=7.3e-13  Score=138.22  Aligned_cols=114  Identities=17%  Similarity=0.220  Sum_probs=93.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-----hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-----GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-----~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      +.|...+.||+|+||.||++.... ++.||||.+....     ....+.+.+|+.++..++||||+++++++...+..++
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            457777899999999999998864 8999999985321     1245789999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCC-CCCc----------------CCHHHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFL-YTEH----------------FFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~-~~~~----------------l~w~~r~~i~~~~~~~~n  617 (617)
                      ||||+++|+|.++|.... ....                |...+...|+|+||||+|
T Consensus       104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~N  160 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHC  160 (351)
T ss_dssp             EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHH
Confidence            999999999998886431 1112                333456689999999998

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.36  E-value=1.1e-12  Score=137.14  Aligned_cols=115  Identities=23%  Similarity=0.235  Sum_probs=95.2

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~l  577 (617)
                      .++|...++||+|+||.||++.... ++.||||.+++.   .....+.+.+|+.++..+ +||||+++++++...+..++
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            4678888999999999999999865 889999999743   233456788999999988 79999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||||+++|+|.++|.....-             ..|..-+...|+|+||||+|
T Consensus       102 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~N  154 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDN  154 (353)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG
T ss_pred             EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHH
Confidence            99999999999999764310             11344466789999999998

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.36  E-value=3.5e-13  Score=141.60  Aligned_cols=114  Identities=28%  Similarity=0.397  Sum_probs=94.2

Q ss_pred             cCCCCcceecccCceeEEEEEEc------CCcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERM  576 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~------~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~  576 (617)
                      ++|...++||+|+||.||++...      .++.||||+++.. ......+|.+|+.++.+++||||+++++++......+
T Consensus        71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  150 (367)
T 3l9p_A           71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF  150 (367)
T ss_dssp             GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence            45777789999999999999953      2568999999643 3455568999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCCC----CCcCCHH----------------HHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLY----TEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~----~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +||||+++|+|.++|.....    ...+++.                +...|+|+||||+|
T Consensus       151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  211 (367)
T 3l9p_A          151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARN  211 (367)
T ss_dssp             EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhh
Confidence            99999999999999986431    1235544                45578999999998

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.36  E-value=4.4e-13  Score=133.94  Aligned_cols=111  Identities=26%  Similarity=0.362  Sum_probs=94.1

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      ++|...+.||+|+||.||++...++..||+|.++.. ....+++.+|+.++.+++||||+++++++......++|+||++
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (268)
T 3sxs_A            8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEG-SMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS   86 (268)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBT-TBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             hheeeeeeeccCCCceEEEEEecCceeEEEEEeccC-CCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence            557777899999999999999888889999999753 2345789999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCcCCH----------------HHHHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      +++|.+++....  ..+++                -+...|+|+||||+|
T Consensus        87 ~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~N  134 (268)
T 3sxs_A           87 NGCLLNYLRSHG--KGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARN  134 (268)
T ss_dssp             TCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGG
T ss_pred             CCcHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcce
Confidence            999999997642  12343                355678899999988

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.36  E-value=3.3e-13  Score=140.11  Aligned_cols=93  Identities=23%  Similarity=0.311  Sum_probs=80.6

Q ss_pred             HHhccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC-----chhhHHHHHHHHHHHHccCCCcccceEEEEEeCC
Q 007129          500 ANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS-----SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD  573 (617)
Q Consensus       500 ~~at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~-----~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~  573 (617)
                      ....++|...+.||+|+||.||++.... +..||+|.+...     .....+.+.+|+.++.+++||||+++++++.+.+
T Consensus        22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  101 (345)
T 3hko_A           22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ  101 (345)
T ss_dssp             HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence            4455678888999999999999998855 789999998642     2345578999999999999999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHh
Q 007129          574 ERMLIYEYLPNKSLNDFIF  592 (617)
Q Consensus       574 ~~~lv~E~~~~GsL~~~L~  592 (617)
                      ..++|+||+++|+|.++|.
T Consensus       102 ~~~lv~e~~~gg~L~~~l~  120 (345)
T 3hko_A          102 YICLVMELCHGGHLLDKLN  120 (345)
T ss_dssp             EEEEEEECCCSCBHHHHEE
T ss_pred             eEEEEEeCCCCCcHHHHHH
Confidence            9999999999999999985

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.35  E-value=8.8e-13  Score=135.96  Aligned_cols=114  Identities=22%  Similarity=0.259  Sum_probs=91.3

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ++|...++||+|+||.||++... .++.||||.+.... ....+.+.+|+.++..++||||+++++++...+..++||||
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   86 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence            56777889999999999999986 48899999986432 23346789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +++|+|.+++.....-             ..|..-+...|+|+||||+|
T Consensus        87 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~N  135 (323)
T 3tki_A           87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN  135 (323)
T ss_dssp             CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             CCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHH
Confidence            9999999999754210             01233355678999999988

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.35  E-value=1.5e-12  Score=135.47  Aligned_cols=114  Identities=17%  Similarity=0.165  Sum_probs=94.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      ++|...+.||+|+||.||++.... ++.||+|.++..   .....+.+.+|+.++.++ +||||+++++++......++|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            457778899999999999999865 889999999743   233456789999999987 899999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |||+++|+|.++|..... .            ..|..-+...|+|+||||+|
T Consensus        89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~N  140 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDN  140 (345)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHH
Confidence            999999999999975421 0            11344466789999999998

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.35  E-value=8.8e-13  Score=138.20  Aligned_cols=114  Identities=17%  Similarity=0.170  Sum_probs=95.4

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      .+.|...++||+|+||.||++.... ++.||||.+.... ...+.+.+|+.++..++||||+++++++......++|+||
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   97 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY   97 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence            3567788899999999999999874 8899999996532 3346789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +++|+|.+++.....-             ..|.+-+...|+|+||||+|
T Consensus        98 ~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~N  146 (361)
T 3uc3_A           98 ASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLEN  146 (361)
T ss_dssp             CCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGG
T ss_pred             CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH
Confidence            9999999999754310             11344567789999999998

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.35  E-value=1.4e-12  Score=135.92  Aligned_cols=113  Identities=23%  Similarity=0.238  Sum_probs=87.4

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      .+.|...++||+|+||.||++.... ++.||||.++..  ...+.+.+|+.++.+++||||+++++++......++||||
T Consensus        52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  129 (349)
T 2w4o_A           52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT--VDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL  129 (349)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc--hhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence            4567778899999999999999875 789999999743  2346788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +++|+|.+++.....-             ..|..-+...|+|+||||+|
T Consensus       130 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~N  178 (349)
T 2w4o_A          130 VTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPEN  178 (349)
T ss_dssp             CCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCccc
Confidence            9999999999764310             01233355678999999998

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.35  E-value=6.8e-13  Score=133.92  Aligned_cols=114  Identities=29%  Similarity=0.459  Sum_probs=96.2

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ..++|...+.||+|+||.||++.... +..||+|.+... ....++|.+|+.++.+++||||+++++++......++|+|
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   89 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE   89 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence            34567778899999999999999876 888999999643 3456789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |+++|+|.+++.... ...+++.                +...|+|+||+|.|
T Consensus        90 ~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~N  141 (288)
T 3kfa_A           90 FMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARN  141 (288)
T ss_dssp             CCTTEEHHHHHHHCC-TTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGG
T ss_pred             cCCCCcHHHHHHhcc-cCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcce
Confidence            999999999998643 2234444                55578899999988

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.35  E-value=1.1e-12  Score=139.14  Aligned_cols=114  Identities=22%  Similarity=0.218  Sum_probs=93.9

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCC--eEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD--ERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~--~~~lv~  579 (617)
                      +.|...++||+|+||.||++.... ++.||||.+.... ....+.+.+|+.++.+++||||+++++++....  ..++||
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence            456777899999999999999876 8999999997533 344578899999999999999999999998765  679999


Q ss_pred             eccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.++|........+++.                +...|+|+||||+|
T Consensus        89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N  142 (396)
T 4eut_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGN  142 (396)
T ss_dssp             CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHH
Confidence            999999999999765432225554                44578899999998

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.35  E-value=7.1e-13  Score=136.40  Aligned_cols=114  Identities=19%  Similarity=0.222  Sum_probs=94.4

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...+.||+|+||.||++.... ++.||+|.++...   ....+.+.+|+.++..++||||+++++++.+....++||
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            567778899999999999999864 8999999986431   234567889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.++|.....-             ..|..-+...|+|+||||+|
T Consensus        86 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~N  136 (318)
T 1fot_A           86 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPEN  136 (318)
T ss_dssp             CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGG
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhe
Confidence            999999999999764310             11333456679999999998

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.35  E-value=6.8e-13  Score=137.01  Aligned_cols=114  Identities=23%  Similarity=0.209  Sum_probs=88.6

Q ss_pred             cCCCCcceecccCceeEEEEEEc----CCcEEEEeecccCc----hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI----EGQEIAAKRLSKSS----GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDER  575 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~----~g~~vAvK~l~~~~----~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~  575 (617)
                      ++|...+.||+|+||.||++...    .++.||+|.++...    ......+.+|+.++.+++||||+++++++...+..
T Consensus        17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   96 (327)
T 3a62_A           17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL   96 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred             HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence            56777889999999999999873    58899999997532    23345688999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++||||+++|+|.++|.....-             ..|..-+...|+|+||||+|
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~N  151 (327)
T 3a62_A           97 YLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPEN  151 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTT
T ss_pred             EEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHH
Confidence            9999999999999999754310             01344466789999999998

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.34  E-value=1.3e-12  Score=136.03  Aligned_cols=117  Identities=21%  Similarity=0.193  Sum_probs=94.9

Q ss_pred             HhccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeE
Q 007129          501 NATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDER  575 (617)
Q Consensus       501 ~at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~  575 (617)
                      ...++|...+.||+|+||.||++.... ++.||+|.++...   ....+.+..|..++..+ +||||+++++++......
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~   93 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL   93 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence            345778888999999999999999865 8899999996432   23456788899998877 899999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++||||+++|+|.++|.....-             ..|..-+...|+|+||||.|
T Consensus        94 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~N  148 (345)
T 1xjd_A           94 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDN  148 (345)
T ss_dssp             EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhh
Confidence            9999999999999999753210             11334466789999999998

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.34  E-value=1.1e-12  Score=139.11  Aligned_cols=115  Identities=16%  Similarity=0.147  Sum_probs=93.2

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~l  577 (617)
                      .++|...++||+|+||.||++.... ++.||+|++++..   ....+.+.+|..++.++ +|||||++++++......+|
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            3568888999999999999999876 7889999997532   23345688999999887 89999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||||+++|+|..+|.....-             ..|..-+...|+|+||||.|
T Consensus       131 V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~N  183 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDN  183 (396)
T ss_dssp             EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG
T ss_pred             EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHH
Confidence            99999999999999764310             11344466789999999998

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.34  E-value=2.7e-12  Score=131.39  Aligned_cols=113  Identities=22%  Similarity=0.255  Sum_probs=92.5

Q ss_pred             CCCC-cceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEEEec
Q 007129          505 NFSD-KNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       505 ~f~~-~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      .|.. .+.||+|+||.||++... .++.||||.+........+.+.+|+.++.++ +||||+++++++...+..++||||
T Consensus        13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~   92 (316)
T 2ac3_A           13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK   92 (316)
T ss_dssp             SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEc
Confidence            3443 367999999999999875 4889999999765555667899999999885 799999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +++|+|.+++..... .            ..|..-+...|+|+||||+|
T Consensus        93 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~N  141 (316)
T 2ac3_A           93 MRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPEN  141 (316)
T ss_dssp             CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             CCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHH
Confidence            999999999976431 0            11333466688999999998

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.34  E-value=1.8e-12  Score=129.53  Aligned_cols=109  Identities=27%  Similarity=0.423  Sum_probs=86.8

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCc----hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSS----GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~----~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...++||+|+||.||++.. .+..||||.++...    ....+.+.+|+.++..++||||+++++++...+..++|+
T Consensus         7 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (271)
T 3dtc_A            7 AELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM   85 (271)
T ss_dssp             TSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred             hheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence            5677788999999999999997 48899999986432    233578999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCcCCHHHH----------------Hh---hhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEHFFWSFF----------------FS---FENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~l~w~~r----------------~~---i~~~~~~~~n  617 (617)
                      ||+++++|.+++....    +++...                ..   |+|+||||+|
T Consensus        86 e~~~~~~L~~~~~~~~----~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~N  138 (271)
T 3dtc_A           86 EFARGGPLNRVLSGKR----IPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSN  138 (271)
T ss_dssp             ECCTTEEHHHHHTSSC----CCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGG
T ss_pred             EcCCCCCHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHH
Confidence            9999999999996432    444433                33   7899999988

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.34  E-value=1.1e-12  Score=134.19  Aligned_cols=109  Identities=23%  Similarity=0.362  Sum_probs=89.0

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      ++|...+.||+|+||.||++.. .++.||||.+..  ....+.|.+|+.++.+++||||+++++++.  +..++||||++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~   82 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE   82 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSS--TTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred             hHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecC--hhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence            4566678999999999999987 478899999864  334578999999999999999999999876  45789999999


Q ss_pred             CCCHHHHHhcCCCCCcCCHHHH-------------------HhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFFWSFF-------------------FSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~w~~r-------------------~~i~~~~~~~~n  617 (617)
                      +|+|.++|........+++...                   ..|+|+||||+|
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~N  135 (307)
T 2eva_A           83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN  135 (307)
T ss_dssp             TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGG
T ss_pred             CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhH
Confidence            9999999987543223444432                   358999999998

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.34  E-value=1.5e-12  Score=137.35  Aligned_cols=114  Identities=16%  Similarity=0.172  Sum_probs=94.7

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...+.||+|+||.||++.... ++.||+|.+...   .....+.+.+|+.++..++|||||++++++......++|+
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            557778899999999999999865 889999998643   2334578999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.++|.....-             ..|..-+...|+|+||||.|
T Consensus        95 e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~N  145 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDN  145 (384)
T ss_dssp             CCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHH
Confidence            999999999999764310             01333456689999999998

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.34  E-value=1.7e-12  Score=130.59  Aligned_cols=114  Identities=27%  Similarity=0.327  Sum_probs=94.5

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccC--chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS--SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...++||+|+||.||++... +++.||+|.+...  ......++.+|+..+..+ +||||+++++++.+.+..++|+
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~   90 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN   90 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            55777889999999999999986 4899999998753  234457889999999999 9999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCC-CCcCCH----------------HHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLY-TEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~-~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.++|..... ...+++                -+...|+|+||||+|
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~N  145 (289)
T 1x8b_A           91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSN  145 (289)
T ss_dssp             ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHH
Confidence            99999999999975311 122333                356688999999998

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.34  E-value=1e-12  Score=141.47  Aligned_cols=115  Identities=25%  Similarity=0.354  Sum_probs=93.7

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      .++|...++||+|+||.||++.... ++.+|+|.+...  .....+.+.+|+.++..++||||+++++++.+.+..++||
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~   89 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF   89 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence            3557778899999999999998754 889999998643  2344567999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.++|.....-             ..|..-+...|+|+||||.|
T Consensus        90 E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~N  140 (444)
T 3soa_A           90 DLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPEN  140 (444)
T ss_dssp             CCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTT
T ss_pred             EeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHH
Confidence            999999999999765321             11344466789999999998

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.34  E-value=1.1e-12  Score=130.79  Aligned_cols=111  Identities=24%  Similarity=0.379  Sum_probs=94.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      ++|...+.||+|+||.||++...+++.||+|.+.... ...+++.+|+.++.+++||||+++++++...+..++|+||++
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME   86 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred             hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence            4567778999999999999999888899999997542 344789999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +++|.+++....  ..+++.                +...|+|+||+|+|
T Consensus        87 ~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~N  134 (267)
T 3t9t_A           87 HGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARN  134 (267)
T ss_dssp             TCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGG
T ss_pred             CCcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchhe
Confidence            999999997643  224443                45568899999987

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.33  E-value=2e-12  Score=142.71  Aligned_cols=114  Identities=24%  Similarity=0.268  Sum_probs=95.3

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      .++|...+.||+|+||.||++.... ++.||+|.+...   .....+.+.+|+.++.+++|||||++++++......++|
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            3567778899999999999999864 899999998643   223456789999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCCCCcCCH----------------HHHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      |||+++|+|.++|.... ...+++                -+...|+|+||||+|
T Consensus       263 mEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeN  316 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPEN  316 (576)
T ss_dssp             ECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             EEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchhe
Confidence            99999999999998653 222343                355679999999998

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.33  E-value=1.7e-12  Score=132.73  Aligned_cols=93  Identities=29%  Similarity=0.451  Sum_probs=80.5

Q ss_pred             ccCCCCcceecccCceeEEEEEEc------CCcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDER  575 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~------~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~  575 (617)
                      .++|...+.||+|+||.||++...      .+..||||.++.. .....+.+.+|+.++.+++||||+++++++...+..
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  101 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL  101 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence            456777889999999999999862      2478999999753 344557899999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFL  595 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~  595 (617)
                      ++|+||+++|+|.+++....
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~  121 (314)
T 2ivs_A          102 LLIVEYAKYGSLRGFLRESR  121 (314)
T ss_dssp             EEEEECCTTCBHHHHHHHTT
T ss_pred             EEEEeecCCCCHHHHHHHHh
Confidence            99999999999999998653

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.33  E-value=1.1e-12  Score=135.50  Aligned_cols=117  Identities=25%  Similarity=0.343  Sum_probs=94.5

Q ss_pred             HhccCCCCcceecccCceeEEEEEEcC-C-----cEEEEeecccCc-hhhHHHHHHHHHHHHcc-CCCcccceEEEEEeC
Q 007129          501 NATENFSDKNKLGEGGFGPVYKGVLIE-G-----QEIAAKRLSKSS-GQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQR  572 (617)
Q Consensus       501 ~at~~f~~~~~lG~G~fG~Vykg~l~~-g-----~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~  572 (617)
                      ...++|...+.||+|+||.||++.... +     ..||+|.+.... ....+.+.+|+.++.++ +||||+++++++...
T Consensus        43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~  122 (333)
T 2i1m_A           43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG  122 (333)
T ss_dssp             CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence            345778888999999999999998753 2     479999997543 34457899999999999 899999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCCC-----------CCcCCHH----------------HHHhhhhcccccCC
Q 007129          573 DERMLIYEYLPNKSLNDFIFGFLY-----------TEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       573 ~~~~lv~E~~~~GsL~~~L~~~~~-----------~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +..++|+||+++|+|.++|.....           ...+++.                +...|+|+||||+|
T Consensus       123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~N  194 (333)
T 2i1m_A          123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARN  194 (333)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccce
Confidence            999999999999999999975310           1123333                55578999999998

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.33  E-value=2e-12  Score=136.43  Aligned_cols=115  Identities=23%  Similarity=0.382  Sum_probs=94.2

Q ss_pred             ccCCCCcceecccCceeEEEEEEc--------CCcEEEEeecccC-chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeC
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLI--------EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQR  572 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~--------~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~  572 (617)
                      .++|...++||+|+||.||++...        .+..||||+++.. .....+++.+|+.++.++ +||||+++++++...
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  147 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD  147 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence            356777889999999999999863        2357999999754 344557899999999999 999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCCC-------------CCcCCHH----------------HHHhhhhcccccCC
Q 007129          573 DERMLIYEYLPNKSLNDFIFGFLY-------------TEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       573 ~~~~lv~E~~~~GsL~~~L~~~~~-------------~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +..++|+||+++|+|.++|.....             ...+++.                +...|+|+||||+|
T Consensus       148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N  221 (382)
T 3tt0_A          148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN  221 (382)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcce
Confidence            999999999999999999986531             1235555                44467899999988

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.33  E-value=1.1e-12  Score=134.33  Aligned_cols=113  Identities=24%  Similarity=0.321  Sum_probs=91.3

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ++|...++||+|+||.||++...+++.||+|++....  ....+.+.+|+.++.+++||||+++++++......++||||
T Consensus        21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  100 (311)
T 3niz_A           21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEF  100 (311)
T ss_dssp             CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEEC
T ss_pred             hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcC
Confidence            5677788999999999999999889999999986432  22346789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++ |+|.+++......              ..|..-+...|+|+||||+|
T Consensus       101 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~N  149 (311)
T 3niz_A          101 ME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQN  149 (311)
T ss_dssp             CS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             CC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHh
Confidence            97 5898888765321              01233355678999999998

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.33  E-value=1.7e-12  Score=132.00  Aligned_cols=113  Identities=24%  Similarity=0.350  Sum_probs=93.0

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      .+.|...+.||+|+||.||++.... ++.||+|.+........+.|.+|+.++.+++||||+++++++...+..++|+||
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   97 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF   97 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred             ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence            3567778899999999999999875 889999999766566678999999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCH----------------HHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      +++++|.+++.....  .+++                -+...|+|+||+|+|
T Consensus        98 ~~~~~l~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~N  147 (302)
T 2j7t_A           98 CPGGAVDAIMLELDR--GLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGN  147 (302)
T ss_dssp             CTTEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGG
T ss_pred             CCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHH
Confidence            999999999875321  2333                355678999999988

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.33  E-value=1.1e-12  Score=136.78  Aligned_cols=114  Identities=22%  Similarity=0.238  Sum_probs=95.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...+.||+|+||.||++.... ++.||+|.+....   ....+.+.+|+.++..++||||+++++++......++||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            567778899999999999999864 8999999986432   234578899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.++|..... .            ..|..-+...|+|+||||.|
T Consensus       121 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~N  171 (350)
T 1rdq_E          121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN  171 (350)
T ss_dssp             ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccce
Confidence            99999999999976431 0            11344567789999999998

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.32  E-value=2.8e-12  Score=132.19  Aligned_cols=112  Identities=27%  Similarity=0.352  Sum_probs=93.2

Q ss_pred             cCCCCcceecccCceeEEEEEE-----cCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEE--eCCeEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVL-----IEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCT--QRDERM  576 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l-----~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~--~~~~~~  576 (617)
                      ++|...++||+|+||.||++.+     ..++.||||++........+.|.+|+.++.+++||||+++++++.  .....+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            4577778999999999999985     247899999998766666788999999999999999999999987  456688


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +|+||+++|+|.++|....  ..+++.                +...|+|+||||+|
T Consensus       103 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~N  157 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARN  157 (327)
T ss_dssp             EEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             EEEeecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhh
Confidence            9999999999999997632  134554                44467899999988

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.32  E-value=3e-12  Score=132.40  Aligned_cols=115  Identities=23%  Similarity=0.426  Sum_probs=93.7

Q ss_pred             ccCCCCcceecccCceeEEEEEEc--------CCcEEEEeecccC-chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeC
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLI--------EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQR  572 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~--------~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~  572 (617)
                      .++|...+.||+|+||.||++...        .+..||||.++.. .....+++.+|+.++.++ +||||+++++++...
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            466778899999999999999873        3678999999754 334567899999999999 899999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCCC-------------CCcCCHH----------------HHHhhhhcccccCC
Q 007129          573 DERMLIYEYLPNKSLNDFIFGFLY-------------TEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       573 ~~~~lv~E~~~~GsL~~~L~~~~~-------------~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +..++|+||+++|+|.++|.....             ...+++.                +...|+|+||||+|
T Consensus       114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N  187 (334)
T 2pvf_A          114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN  187 (334)
T ss_dssp             SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccce
Confidence            999999999999999999986532             1125554                44568899999988

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.32  E-value=4.9e-12  Score=130.49  Aligned_cols=106  Identities=24%  Similarity=0.190  Sum_probs=88.6

Q ss_pred             cceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccC-CCcccceEEEEEeCCeEEEEEeccCCCC
Q 007129          509 KNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQ-HRNLVKLIGCCTQRDERMLIYEYLPNKS  586 (617)
Q Consensus       509 ~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~~~~~~lv~E~~~~Gs  586 (617)
                      .++||+|+||.||++.... ++.||||.+..   .....+.+|+.++..++ ||||+++++++.+....++||||+++|+
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK---RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEG---GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEECh---hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            4689999999999999865 88999999863   34567889999999997 9999999999999999999999999999


Q ss_pred             HHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          587 LNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       587 L~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |.++|.....-             ..|..-+...|+|+||||+|
T Consensus        93 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~N  136 (325)
T 3kn6_A           93 LFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPEN  136 (325)
T ss_dssp             HHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHH
Confidence            99999865310             01233355688999999998

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.32  E-value=1.8e-12  Score=145.41  Aligned_cols=104  Identities=31%  Similarity=0.461  Sum_probs=87.1

Q ss_pred             eecccCceeEEEEEEc---CCcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCCCC
Q 007129          511 KLGEGGFGPVYKGVLI---EGQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKS  586 (617)
Q Consensus       511 ~lG~G~fG~Vykg~l~---~g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~Gs  586 (617)
                      +||+|+||.||+|.+.   .+..||||.++... ....++|.+|+.++.+++|||||++++++.. +..+|||||+++|+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            7999999999999875   35679999997543 3456889999999999999999999999975 56899999999999


Q ss_pred             HHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          587 LNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       587 L~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |.++|....  ..+++.                +...|+|+||||+|
T Consensus       422 L~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~N  466 (613)
T 2ozo_A          422 LHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARN  466 (613)
T ss_dssp             HHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             HHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHH
Confidence            999997643  234554                45578999999998

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.32  E-value=1.9e-12  Score=130.75  Aligned_cols=114  Identities=23%  Similarity=0.228  Sum_probs=93.8

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      +.|...++||+|+||.||++.... +..+|+|.+.... ....+.+.+|+.++.+++||||+++++++......++|+||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            456777899999999999999865 8899999986432 34467899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCC-CCCcCCH----------------HHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFL-YTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~-~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      +++|+|.+++.... ....+++                -+...|+|+||+|.|
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~N  154 (285)
T 3is5_A          102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPEN  154 (285)
T ss_dssp             CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGG
T ss_pred             CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHH
Confidence            99999999986431 1122333                355578999999988

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.32  E-value=1.4e-12  Score=133.17  Aligned_cols=115  Identities=25%  Similarity=0.300  Sum_probs=94.3

Q ss_pred             ccCCCCcceecccCceeEEEEEEc------CCcEEEEeecccCc-hhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCe
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKSS-GQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDE  574 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~------~g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~  574 (617)
                      .++|...+.||+|+||.||++...      .++.||||.++... ....+.+.+|+.++.++ +||||+++++++...+.
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~  101 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence            356777889999999999999852      36789999997543 34457899999999999 99999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCC---------------CcCCHH----------------HHHhhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLYT---------------EHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~~---------------~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      .++|+||+++|+|.++|......               ..+++.                +...|+|+||||+|
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N  175 (313)
T 1t46_A          102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN  175 (313)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccce
Confidence            99999999999999999865321               124444                45578899999988

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.31  E-value=1e-12  Score=133.49  Aligned_cols=115  Identities=19%  Similarity=0.268  Sum_probs=86.7

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch--------------------------hhHHHHHHHHHHHH
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG--------------------------QGMEEFENEVLLIA  555 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~--------------------------~~~~~f~~Ev~~l~  555 (617)
                      .++|...++||+|+||.||++.... ++.||||.+.....                          ...++|.+|+.++.
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            3567788899999999999998764 88999999864321                          12357899999999


Q ss_pred             ccCCCcccceEEEEEe--CCeEEEEEeccCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          556 KLQHRNLVKLIGCCTQ--RDERMLIYEYLPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       556 ~l~H~nlv~l~g~~~~--~~~~~lv~E~~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +++||||+++++++..  ....++||||+++|+|.+++......            ..|..-+...|+|+||||+|
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~N  167 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSN  167 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH
Confidence            9999999999999987  56789999999999998865432110            01233355678999999988

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.31  E-value=3.7e-12  Score=128.51  Aligned_cols=110  Identities=27%  Similarity=0.494  Sum_probs=89.5

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchh-------hHHHHHHHHHHHHccCCCcccceEEEEEeCCeE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQ-------GMEEFENEVLLIAKLQHRNLVKLIGCCTQRDER  575 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~-------~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~  575 (617)
                      ++|...+.||+|+||.||++... +++.||+|.+......       ..++|.+|+.++.+++||||+++++++....  
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--   96 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--   96 (287)
T ss_dssp             TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred             ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence            56777889999999999999985 4889999998643221       1268999999999999999999999986554  


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCcCCHHHHH----------------h--hhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYTEHFFWSFFF----------------S--FENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~~~l~w~~r~----------------~--i~~~~~~~~n  617 (617)
                      ++|+||+++|+|.+++....  ..+++..+.                .  |+|+||||+|
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~N  154 (287)
T 4f0f_A           97 RMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPN  154 (287)
T ss_dssp             EEEEECCTTCBHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGG
T ss_pred             eEEEEecCCCCHHHHHhccc--CCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcce
Confidence            69999999999999997653  245665443                4  9999999998

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.31  E-value=2.2e-12  Score=133.85  Aligned_cols=116  Identities=27%  Similarity=0.396  Sum_probs=92.8

Q ss_pred             hccCCCCcceecccCceeEEEEEEc------CCcEEEEeecccC-chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCC
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRD  573 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~------~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~  573 (617)
                      ..++|...+.||+|+||.||++...      .+..||||.+... .....+.+.+|+.++.++ +||||+++++++...+
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  122 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  122 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence            4567888899999999999999862      2568999999743 233457899999999999 8999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCCC--------------------CcCCHH----------------HHHhhhhcccccCC
Q 007129          574 ERMLIYEYLPNKSLNDFIFGFLYT--------------------EHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       574 ~~~lv~E~~~~GsL~~~L~~~~~~--------------------~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ..++||||+++|+|.++|......                    ..++|.                +...|+|+||||+|
T Consensus       123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~N  202 (344)
T 1rjb_A          123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN  202 (344)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGG
T ss_pred             ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhh
Confidence            999999999999999999875321                    124544                44578999999988

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.31  E-value=2.4e-12  Score=129.60  Aligned_cols=114  Identities=25%  Similarity=0.374  Sum_probs=95.1

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ++|...++||+|+||.||++.... ++.||+|.+...  .....+.+.+|+.++.+++||||+++++++......++|+|
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   85 (284)
T 3kk8_A            6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD   85 (284)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEe
Confidence            567778899999999999999865 889999998643  33445789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+++|+|.+++.....-             ..|.+-+...|+|+||+|+|
T Consensus        86 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~N  135 (284)
T 3kk8_A           86 LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPEN  135 (284)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             cCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHH
Confidence            99999999988754310             12344466689999999988

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.31  E-value=2.1e-12  Score=132.86  Aligned_cols=114  Identities=25%  Similarity=0.310  Sum_probs=94.0

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch------hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG------QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERM  576 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~------~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~  576 (617)
                      +.|...+.||+|+||.||++.... ++.||+|.+.....      ...+++.+|+.++.+++||||+++++++......+
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV   91 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            456777899999999999999865 88999999864321      13578999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|+||+++++|.+++.....-             ..|..-+...|+|+||+|+|
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~N  145 (321)
T 2a2a_A           92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPEN  145 (321)
T ss_dssp             EEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHH
Confidence            999999999999999764310             01333456678999999988

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.31  E-value=3.7e-12  Score=128.14  Aligned_cols=111  Identities=25%  Similarity=0.319  Sum_probs=92.9

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch------hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG------QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERM  576 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~------~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~  576 (617)
                      ++|...+.||+|+||.||++.... ++.||+|.++....      ...++|.+|+.++.+++||||+++++++......+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            346777899999999999999874 88999999864321      23678999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +|+||+++++|.+++....   .+++.                +...|+|+||+|+|
T Consensus        85 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~N  138 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEKE---SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPEN  138 (283)
T ss_dssp             EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             EEEeecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHH
Confidence            9999999999999997532   23333                55578999999987

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.31  E-value=8e-13  Score=135.76  Aligned_cols=118  Identities=24%  Similarity=0.356  Sum_probs=95.3

Q ss_pred             HHhccCCCCcceecccCceeEEEEEEc------CCcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeC
Q 007129          500 ANATENFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR  572 (617)
Q Consensus       500 ~~at~~f~~~~~lG~G~fG~Vykg~l~------~g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~  572 (617)
                      ....++|...+.||+|+||.||++...      .++.||||.+.... .....+|.+|+.++.+++||||+++++++...
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~  100 (322)
T 1p4o_A           21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG  100 (322)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred             cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence            345577888899999999999999865      26789999997542 34456799999999999999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCCC-------CCcCCH----------------HHHHhhhhcccccCC
Q 007129          573 DERMLIYEYLPNKSLNDFIFGFLY-------TEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       573 ~~~~lv~E~~~~GsL~~~L~~~~~-------~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      ...++|+||+++|+|.++|.....       ...+++                -+...|+|+||||+|
T Consensus       101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~N  168 (322)
T 1p4o_A          101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARN  168 (322)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGG
T ss_pred             CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccce
Confidence            999999999999999999975210       112333                355578999999988

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.30  E-value=2.9e-12  Score=133.93  Aligned_cols=125  Identities=25%  Similarity=0.273  Sum_probs=101.5

Q ss_pred             CCccCHHHHHHhccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccC-----CCcccc
Q 007129          491 LPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQ-----HRNLVK  564 (617)
Q Consensus       491 ~~~~~~~~l~~at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~-----H~nlv~  564 (617)
                      ...+++.+.....+.|...++||+|+||.||++.... ++.||||.++.. ....+.+..|+.++..++     ||||++
T Consensus        22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~  100 (360)
T 3llt_A           22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVK  100 (360)
T ss_dssp             GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred             ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence            4445565555667889999999999999999999854 889999999642 344567888999999986     999999


Q ss_pred             eEEEEEeCCeEEEEEeccCCCCHHHHHhcCCCCC---------------cCCHHHHHhhhhcccccCC
Q 007129          565 LIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTE---------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       565 l~g~~~~~~~~~lv~E~~~~GsL~~~L~~~~~~~---------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      +++++...+..++||||+ +++|.+++.......               .|.+-+...|+|+||||+|
T Consensus       101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  167 (360)
T 3llt_A          101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPEN  167 (360)
T ss_dssp             EEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             ccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCccc
Confidence            999999999999999999 999999998654211               1333466689999999998

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.30  E-value=2e-12  Score=130.80  Aligned_cols=113  Identities=22%  Similarity=0.293  Sum_probs=92.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ++|...++||+|+||.||++....++.||+|++....  ....+.+.+|+.++.+++||||+++++++...+..++|+||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            3567778999999999999998779999999986432  22347889999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +++ +|.+++......              ..|..-+...|+|+||||+|
T Consensus        82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N  130 (288)
T 1ob3_A           82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQN  130 (288)
T ss_dssp             CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH
Confidence            975 999998764211              01333456688999999988

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.30  E-value=2.8e-12  Score=133.84  Aligned_cols=116  Identities=22%  Similarity=0.157  Sum_probs=95.3

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEE
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERM  576 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~  576 (617)
                      ..++|...+.||+|+||.||++.... ++.||+|.++..   .....+.+..|..++..+ +||||+++++++...+..+
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   97 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   97 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence            34678888999999999999999876 789999999643   223456789999999988 8999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +||||+++|+|.++|..... .            ..|..-+...|+|+||||.|
T Consensus        98 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~N  151 (353)
T 2i0e_A           98 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDN  151 (353)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHH
Confidence            99999999999999975321 0            11344466789999999998

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.30  E-value=1.2e-12  Score=134.45  Aligned_cols=117  Identities=23%  Similarity=0.382  Sum_probs=86.6

Q ss_pred             HhccCCCCcceecccCceeEEEEEEcC-Cc---EEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCe
Q 007129          501 NATENFSDKNKLGEGGFGPVYKGVLIE-GQ---EIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDE  574 (617)
Q Consensus       501 ~at~~f~~~~~lG~G~fG~Vykg~l~~-g~---~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~  574 (617)
                      ...++|...+.||+|+||.||++.... +.   .||||.++..  .....++|.+|+.++.+++||||+++++++.....
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   99 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA   99 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred             cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence            345678888999999999999998765 32   7999999743  34456789999999999999999999999987765


Q ss_pred             E------EEEEeccCCCCHHHHHhcCCC---CCcCCHH----------------HHHhhhhcccccCC
Q 007129          575 R------MLIYEYLPNKSLNDFIFGFLY---TEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       575 ~------~lv~E~~~~GsL~~~L~~~~~---~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      .      ++|+||+++|+|.+++.....   ...+++.                +...|+|+||||+|
T Consensus       100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~N  167 (323)
T 3qup_A          100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARN  167 (323)
T ss_dssp             -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcce
Confidence            5      899999999999999964321   1124443                55678999999988

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.30  E-value=4.4e-12  Score=138.99  Aligned_cols=115  Identities=23%  Similarity=0.260  Sum_probs=92.2

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch-------------hhHHHHHHHHHHHHccCCCcccceEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG-------------QGMEEFENEVLLIAKLQHRNLVKLIGC  568 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~-------------~~~~~f~~Ev~~l~~l~H~nlv~l~g~  568 (617)
                      .+.|...++||+|+||.||++.... ++.||+|.+.....             ...+++.+|+.++.+++||||++++++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            4668888999999999999999865 78999999864321             235689999999999999999999999


Q ss_pred             EEeCCeEEEEEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          569 CTQRDERMLIYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       569 ~~~~~~~~lv~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +......++|+||+++|+|.+++.....-             ..|..-+...|+|+||||+|
T Consensus       115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~N  176 (504)
T 3q5i_A          115 FEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPEN  176 (504)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             EEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHH
Confidence            99999999999999999999998754310             01333456689999999998

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.30  E-value=3.5e-12  Score=129.97  Aligned_cols=114  Identities=23%  Similarity=0.243  Sum_probs=91.5

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      +.|...+.||+|+||.||++... +++.||+|.++.......+.+.+|+.++.+++||||+++++++......++|+||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV   88 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence            45677789999999999999986 48899999997654445567999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++++|.+++..... .            ..|..-+...|+|+||+|+|
T Consensus        89 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~N  136 (304)
T 2jam_A           89 SGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPEN  136 (304)
T ss_dssp             CSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGG
T ss_pred             CCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHH
Confidence            99999999875431 0            01333456688999999988

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.30  E-value=1.1e-12  Score=141.42  Aligned_cols=114  Identities=19%  Similarity=0.108  Sum_probs=84.8

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...++||+|+||.||++.... ++.||||.+...   .......+.+|+.++..++||||+++++++...+..+|||
T Consensus       148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~  227 (446)
T 4ejn_A          148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM  227 (446)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred             HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence            567778899999999999998765 889999998642   2334467889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCC-------------CcCCHHHH-HhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYT-------------EHFFWSFF-FSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~-------------~~l~w~~r-~~i~~~~~~~~n  617 (617)
                      ||+++|+|.++|.....-             ..|..-+. ..|+|+||||+|
T Consensus       228 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~N  279 (446)
T 4ejn_A          228 EYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLEN  279 (446)
T ss_dssp             CCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGG
T ss_pred             eeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHH
Confidence            999999999999754310             01233344 679999999998

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.30  E-value=4e-12  Score=142.98  Aligned_cols=104  Identities=27%  Similarity=0.363  Sum_probs=86.1

Q ss_pred             ceecccCceeEEEEEEcC---CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          510 NKLGEGGFGPVYKGVLIE---GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~---g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      ++||+|+||.||+|.+..   ++.||||+++...  ....++|.+|+.++.+++|||||++++++. .+..+|||||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence            479999999999997642   5789999997532  334678999999999999999999999996 4568899999999


Q ss_pred             CCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          585 KSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |+|.++|....   .+++.                +...|+|+||||+|
T Consensus       454 g~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~N  499 (635)
T 4fl3_A          454 GPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARN  499 (635)
T ss_dssp             EEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             CCHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHh
Confidence            99999997643   24444                45578999999998

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.30  E-value=6e-12  Score=128.54  Aligned_cols=114  Identities=22%  Similarity=0.300  Sum_probs=93.4

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ++|...++||+|+||.||++.... ++.||||++....  ....+.+.+|+.++.+++||||+++++++......++|+|
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            457778899999999999999865 8999999886432  2335678999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+++++|.+++.....-             ..|..-+...|+|+||+|+|
T Consensus        83 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~N  132 (311)
T 4agu_A           83 YCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPEN  132 (311)
T ss_dssp             CCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             eCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhh
Confidence            99999999988754310             01233355678999999988

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.30  E-value=3.8e-12  Score=133.04  Aligned_cols=111  Identities=16%  Similarity=0.136  Sum_probs=93.9

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ++|...++||+|+||.||++.... ++.||+|.+... .....+.+.+|+.++.+++||||+++++++...+..++||||
T Consensus        33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  112 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH  112 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence            457778899999999999999864 889999998754 344457899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHH----------------HH-HhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWS----------------FF-FSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~----------------~r-~~i~~~~~~~~n  617 (617)
                      +++|+|.+++....   .+++.                +. ..|+|+||||+|
T Consensus       113 ~~~~~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~N  162 (360)
T 3eqc_A          113 MDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSN  162 (360)
T ss_dssp             CTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGG
T ss_pred             CCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHH
Confidence            99999999997643   13332                33 369999999988

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.30  E-value=2.5e-12  Score=131.71  Aligned_cols=115  Identities=23%  Similarity=0.280  Sum_probs=92.6

Q ss_pred             ccCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEe----CCeEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ----RDERML  577 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~----~~~~~l  577 (617)
                      .++|...+.||+|+||.||++... .++.||||++........+.+.+|+.++.+++||||+++++++..    ....++
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  107 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL  107 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence            356888899999999999999984 489999999876666667889999999999999999999999873    346789


Q ss_pred             EEeccCCCCHHHHHhcCC-CCCcCCHH----------------HHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFL-YTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~-~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |+||+++|+|.+++.... ....+++.                +...|+|+||+|+|
T Consensus       108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~N  164 (317)
T 2buj_A          108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTN  164 (317)
T ss_dssp             EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH
Confidence            999999999999997521 12235554                44578899999988

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.30  E-value=2.6e-12  Score=137.43  Aligned_cols=115  Identities=17%  Similarity=0.226  Sum_probs=90.1

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--------hhhHHHHHHHHHHHHccCCCcccceEEEEEeC
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--------GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR  572 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--------~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~  572 (617)
                      ..++|...++||+|+||.||++.... ++.||||.+....        ......+.+|+.++.+++||||+++++++. .
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~  211 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-A  211 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-S
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-c
Confidence            34678888999999999999998865 7899999986421        112235899999999999999999999974 5


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          573 DERMLIYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       573 ~~~~lv~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +..++||||+++|+|.+++.....-             ..|..-+...|+|+||||+|
T Consensus       212 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~N  269 (419)
T 3i6u_A          212 EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPEN  269 (419)
T ss_dssp             SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHh
Confidence            6689999999999999998764320             01233355678999999998

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.30  E-value=3.1e-12  Score=138.78  Aligned_cols=111  Identities=20%  Similarity=0.273  Sum_probs=93.5

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...+.||+|+||.||++... .|+.||||.+....   ....+.+.+|+.++..++||||+++++++......++|+
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~   95 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM   95 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            55777789999999999999986 48999999986432   123467999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.++|....   .+++.                +...|+|+||||+|
T Consensus        96 E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~N  146 (476)
T 2y94_A           96 EYVSGGELFDYICKNG---RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPEN  146 (476)
T ss_dssp             ECCSSEEHHHHTTSSS---SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGG
T ss_pred             eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHH
Confidence            9999999999997543   24433                55678999999998

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.30  E-value=2.3e-12  Score=130.92  Aligned_cols=112  Identities=28%  Similarity=0.428  Sum_probs=88.9

Q ss_pred             cCCCCcceecccCceeEEEEEE-----cCCcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeC--CeE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVL-----IEGQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR--DER  575 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l-----~~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~--~~~  575 (617)
                      +.|...++||+|+||.||++.+     ..++.||||.+... .....+.+.+|+.++.+++||||+++++++...  ...
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            3466678999999999999985     24789999999743 334457899999999999999999999999876  668


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++|+||+++|+|.+++.....  .+++.                +...|+|+||||.|
T Consensus       101 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~N  156 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKNKN--KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARN  156 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHHTT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             EEEEEeCCCCcHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchhe
Confidence            999999999999999965421  23433                55578899999988

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.30  E-value=2.4e-12  Score=129.25  Aligned_cols=112  Identities=25%  Similarity=0.367  Sum_probs=93.4

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...+.||+|+||.||++... .++.||||.+....   ....+.+.+|+.++.+++||||+++++++...+..++|+
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL   90 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence            56777889999999999999975 48999999986432   123478999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ||+++++|.+++....  ..+++.                +...|+|+||+|+|
T Consensus        91 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~N  142 (278)
T 3cok_A           91 EMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSN  142 (278)
T ss_dssp             ECCTTEEHHHHHHTCS--SCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGG
T ss_pred             ecCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH
Confidence            9999999999998642  224433                45578899999987

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.29  E-value=3.8e-12  Score=128.88  Aligned_cols=113  Identities=20%  Similarity=0.310  Sum_probs=89.9

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ++|...++||+|+||.||++.... ++.||||++...  .....+.+.+|+.++.+++||||+++++++......++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            456777899999999999999865 889999998643  23344788999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+++ +|.+++......              ..|..-+...|+|+||||+|
T Consensus        82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~N  131 (292)
T 3o0g_A           82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQN  131 (292)
T ss_dssp             CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence            9975 666666543211              01333355678999999988

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.29  E-value=1.5e-12  Score=133.22  Aligned_cols=114  Identities=18%  Similarity=0.197  Sum_probs=91.1

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCe----E
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDE----R  575 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~----~  575 (617)
                      +.|...++||+|+||.||++... .++.||||.++..   .....+.|.+|+.++.+++||||+++++++.....    .
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~   91 (311)
T 3ork_A           12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   91 (311)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence            56777889999999999999974 4889999999753   22334679999999999999999999999876443    4


Q ss_pred             EEEEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++||||+++|+|.+++.....-             ..|..-+...|+|+||||+|
T Consensus        92 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~N  146 (311)
T 3ork_A           92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPAN  146 (311)
T ss_dssp             EEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHH
Confidence            8999999999999999754310             11333456688999999988

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.29  E-value=2.5e-12  Score=132.56  Aligned_cols=112  Identities=30%  Similarity=0.447  Sum_probs=92.3

Q ss_pred             cCCCCcceecccCceeEEEEEE-----cCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCC--eEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVL-----IEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD--ERM  576 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l-----~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~--~~~  576 (617)
                      ++|...++||+|+||.||++.+     ..++.||||.+........+.|.+|+.++.+++||||+++++++...+  ..+
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  120 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK  120 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence            4567778999999999999985     247899999998766666788999999999999999999999986643  678


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +|+||+++|+|.++|.....  .+++.                +...|+|+||+|+|
T Consensus       121 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~N  175 (326)
T 2w1i_A          121 LIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN  175 (326)
T ss_dssp             EEECCCTTCBHHHHHHHSTT--SSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             EEEECCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcce
Confidence            99999999999999986532  24444                44568899999988

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.29  E-value=4.7e-12  Score=130.49  Aligned_cols=115  Identities=28%  Similarity=0.392  Sum_probs=92.3

Q ss_pred             ccCCCCcceecccCceeEEEEEEc------CCcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDER  575 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~------~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~  575 (617)
                      .++|...+.||+|+||.||++...      .+..||||.+... ......+|.+|+.++.+++||||+++++++......
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  108 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence            356788889999999999999842      3678999999743 344557899999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCCC----CCcCCHH----------------HHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLY----TEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~----~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++|+||+++|+|.++|.....    ...+++.                +...|+|+||+|+|
T Consensus       109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~N  170 (327)
T 2yfx_A          109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARN  170 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhH
Confidence            999999999999999986532    1235554                44568899999988

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.29  E-value=5.8e-12  Score=127.82  Aligned_cols=107  Identities=21%  Similarity=0.311  Sum_probs=86.0

Q ss_pred             ccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHc--cCCCcccceEEEEEeC----CeEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAK--LQHRNLVKLIGCCTQR----DERM  576 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~--l~H~nlv~l~g~~~~~----~~~~  576 (617)
                      .++|...++||+|+||.||++.. +++.||||++..   ...+.+..|.+++..  ++||||+++++++...    ...+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECG---GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecc---ccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence            35677889999999999999987 688999999864   334566677776666  7999999999987653    4578


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCcCCHH----------------H--------HHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYTEHFFWS----------------F--------FFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~--------r~~i~~~~~~~~n  617 (617)
                      +|+||+++|+|.+++...    .+++.                +        ...|+|+||||+|
T Consensus        83 lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~N  143 (301)
T 3q4u_A           83 LITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKN  143 (301)
T ss_dssp             EEECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGG
T ss_pred             EehhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHh
Confidence            999999999999999543    24554                3        5568999999998

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.29  E-value=4.4e-12  Score=127.30  Aligned_cols=114  Identities=20%  Similarity=0.217  Sum_probs=91.8

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEe--CCeEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ--RDERMLI  578 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~--~~~~~lv  578 (617)
                      ++|...+.||+|+||.||++.... ++.||+|.+...  .....+.|.+|+.++.+++||||+++++++..  ....++|
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   85 (279)
T 2w5a_A            6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   85 (279)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred             hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence            567778899999999999999864 889999998643  34455789999999999999999999998865  5678999


Q ss_pred             EeccCCCCHHHHHhcCCC-CCcCCHHHH----------------Hh-----hhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLY-TEHFFWSFF----------------FS-----FENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~-~~~l~w~~r----------------~~-----i~~~~~~~~n  617 (617)
                      +||+++|+|.+++..... ...+++...                ..     |+|+||+|+|
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~N  146 (279)
T 2w5a_A           86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN  146 (279)
T ss_dssp             EECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGG
T ss_pred             EeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhh
Confidence            999999999999975421 223555433                33     9999999987

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.29  E-value=5.6e-12  Score=129.48  Aligned_cols=108  Identities=27%  Similarity=0.433  Sum_probs=89.9

Q ss_pred             CCCcceecccCceeEEEEEEc-----CCcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeC--CeEEE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLI-----EGQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR--DERML  577 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~-----~g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~--~~~~l  577 (617)
                      |...++||+|+||.||++.+.     .++.||||++.... ....+.|.+|+.++.+++||||+++++++...  ...++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            466789999999999998763     47889999997543 34467899999999999999999999999884  67899


Q ss_pred             EEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |+||+++|+|.+++....    +++.                +...|+|+||||+|
T Consensus       113 v~e~~~~~~L~~~l~~~~----~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~N  164 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARN  164 (318)
T ss_dssp             EECCCTTCBHHHHGGGSC----CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             EEecccCCcHHHHHhhCC----CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchhe
Confidence            999999999999997643    4444                45568899999988

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.29  E-value=2.9e-12  Score=133.51  Aligned_cols=111  Identities=24%  Similarity=0.367  Sum_probs=90.9

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      +.|...++||+|+||.||++... +++.||||++....   ....++|.+|+.++.+++||||+++++++...+..++|+
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            34677789999999999999874 48899999986432   233468999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ||++ |+|.+++....  ..+++.                +...|+|+||||+|
T Consensus       134 e~~~-g~l~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N  184 (348)
T 1u5q_A          134 EYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGN  184 (348)
T ss_dssp             ECCS-EEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGG
T ss_pred             ecCC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHH
Confidence            9997 78988886432  234444                45578999999998

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.29  E-value=5.2e-12  Score=138.88  Aligned_cols=114  Identities=23%  Similarity=0.288  Sum_probs=95.0

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...+.||+|+||.||++.... ++.||+|++....   ....+.+.+|+.++.+++||||+++++++......++||
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm  264 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM  264 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence            567777899999999999999865 8999999996432   234567899999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCC-CCcCCHH----------------HHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLY-TEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~-~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.++|..... ...+++.                +...|+|+||||.|
T Consensus       265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~N  319 (543)
T 3c4z_A          265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPEN  319 (543)
T ss_dssp             CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHH
Confidence            99999999999976432 2234443                45678999999998

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.29  E-value=4e-12  Score=131.80  Aligned_cols=113  Identities=22%  Similarity=0.284  Sum_probs=92.3

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...+.||+|+||.||++... .++.||||.+....   ....+.+.+|+.++..++||||+++++++......++|+
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   88 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI   88 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            56777889999999999999985 48899999986421   222467999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+ +|+|.+++.....-             ..|..-+...|+|+||||+|
T Consensus        89 E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~N  138 (336)
T 3h4j_B           89 EYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPEN  138 (336)
T ss_dssp             CCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTT
T ss_pred             ECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhh
Confidence            999 78999998754310             11333466689999999998

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.28  E-value=2.9e-12  Score=140.07  Aligned_cols=114  Identities=23%  Similarity=0.234  Sum_probs=90.9

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      +.|...++||+|+||.||++.... +..||+|.+....  ....+.+.+|+.++..++|||||++++++......++|+|
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            347778899999999999999864 8899999987532  3345789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+++|+|.+++.....-             ..|..-+...|+|+||||+|
T Consensus       117 ~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~N  166 (494)
T 3lij_A          117 CYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPEN  166 (494)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhh
Confidence            99999999988754310             11344467789999999998

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.28  E-value=6.9e-12  Score=127.05  Aligned_cols=114  Identities=19%  Similarity=0.184  Sum_probs=93.1

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      +.|...+.||+|+||.||++.... ++.+|+|.+...   .....+.+.+|+.++.+++||||+++++++...+..++|+
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   94 (294)
T 2rku_A           15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL   94 (294)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence            456777899999999999999875 789999998643   2344578999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++++|.+++..... .            ..|..-+...|+|+||+|+|
T Consensus        95 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~N  145 (294)
T 2rku_A           95 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGN  145 (294)
T ss_dssp             ECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHh
Confidence            99999999999865321 0            01233355678899999987

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.28  E-value=3e-12  Score=132.12  Aligned_cols=111  Identities=27%  Similarity=0.427  Sum_probs=86.5

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-Cc----EEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQ----EIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~----~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      ++|...++||+|+||.||++.... ++    .||+|.+... .....++|.+|+.++.+++||||+++++++.... .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~   93 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence            457777899999999999999753 43    4688888643 3345678999999999999999999999998754 779


Q ss_pred             EEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |+||+++|+|.+++.....  .+++.                +...|+|+||||+|
T Consensus        94 v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~N  147 (327)
T 3poz_A           94 ITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARN  147 (327)
T ss_dssp             EEECCTTCBHHHHHHHSTT--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             EEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChhe
Confidence            9999999999999987532  24444                45578999999998

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.28  E-value=3.6e-12  Score=128.33  Aligned_cols=111  Identities=25%  Similarity=0.323  Sum_probs=90.3

Q ss_pred             cCCCCcceecccCceeEEEEEEcC----CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE----GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~----g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      +.|...+.||+|+||.||++....    +..||+|.++.. .....+.|.+|+.++.+++||||+++++++ ..+..++|
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv   93 (281)
T 1mp8_A           15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWII   93 (281)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEE
T ss_pred             HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEEE
Confidence            557777899999999999998753    457999998753 334457899999999999999999999997 45678899


Q ss_pred             EeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +||+++|+|.+++....  ..+++.                +...|+|+||||+|
T Consensus        94 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N  146 (281)
T 1mp8_A           94 MELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARN  146 (281)
T ss_dssp             EECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             EecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHH
Confidence            99999999999997643  234444                44568899999998

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.28  E-value=3.1e-12  Score=128.53  Aligned_cols=111  Identities=28%  Similarity=0.368  Sum_probs=91.3

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      ++|...+.||+|+||.||++...+++.||||.+... ....+.|.+|+.++.+++||||+++++++. .+..++|+||++
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~   90 (279)
T 1qpc_A           13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYME   90 (279)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred             HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCC-cccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCC
Confidence            557778899999999999999887889999998653 234578999999999999999999999986 456899999999


Q ss_pred             CCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +++|.+++.... ...+++.                +...|+|+||+|+|
T Consensus        91 ~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~N  139 (279)
T 1qpc_A           91 NGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN  139 (279)
T ss_dssp             TCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             CCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhh
Confidence            999999997532 1124443                45578999999987

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.28  E-value=3.3e-12  Score=132.20  Aligned_cols=112  Identities=26%  Similarity=0.430  Sum_probs=91.7

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-----CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-----GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-----g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      +.|...+.||+|+||.||++....     +..||||.++.. ......+|.+|+.++.+++||||+++++++......++
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  123 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI  123 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence            345556899999999999998753     235999999754 33445689999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |+||+++|+|.++|....  ..+++.                +...|+|+||||+|
T Consensus       124 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~N  177 (333)
T 1mqb_A          124 ITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARN  177 (333)
T ss_dssp             EEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             EEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhe
Confidence            999999999999997642  224443                45578999999988

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.28  E-value=2.2e-12  Score=135.24  Aligned_cols=113  Identities=17%  Similarity=0.145  Sum_probs=91.2

Q ss_pred             hccCCCCcceecccCceeEEEEE------EcCCcEEEEeecccCchhhHHHHHHHHHHHHccC---CCcccceEEEEEeC
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGV------LIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQ---HRNLVKLIGCCTQR  572 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~------l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~---H~nlv~l~g~~~~~  572 (617)
                      ..+.|...++||+|+||.||++.      ...++.||||.++..   ...++..|+.++..++   |+|++++++++...
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~  139 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ  139 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence            44667788899999999999994      345789999999643   3467888888888887   99999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCC--CCCcCCHH----------------HHHhhhhcccccCC
Q 007129          573 DERMLIYEYLPNKSLNDFIFGFL--YTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       573 ~~~~lv~E~~~~GsL~~~L~~~~--~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +..+|||||+++|+|.++|....  ....++|.                +...|+|+||||+|
T Consensus       140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~N  202 (365)
T 3e7e_A          140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDN  202 (365)
T ss_dssp             SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGG
T ss_pred             CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHH
Confidence            99999999999999999997421  12335554                45578999999998

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.28  E-value=4e-12  Score=138.60  Aligned_cols=114  Identities=25%  Similarity=0.257  Sum_probs=95.1

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      +.|...++||+|+||.||++.... ++.||||.+...   .....+.+.+|+.++.+++||||+++++++......++|+
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  105 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG  105 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            456777899999999999999864 899999998643   2345678999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.+++.....-             ..|..-+...|+|+||||+|
T Consensus       106 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~N  156 (484)
T 3nyv_A          106 EVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPEN  156 (484)
T ss_dssp             CCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHH
Confidence            999999999999765321             11334466689999999998

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.28  E-value=7.5e-12  Score=128.93  Aligned_cols=114  Identities=29%  Similarity=0.461  Sum_probs=91.1

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcE--EEEeecccC-chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQE--IAAKRLSKS-SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~--vAvK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      ++|...+.||+|+||.||++.... +..  +|+|.++.. .....+.+.+|+.++.++ +||||+++++++...+..++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            567778899999999999998864 554  599988643 234456799999999999 899999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCC-------------CCCcCCHH----------------HHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFL-------------YTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~-------------~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |||+++|+|.+++....             ....+++.                +...|+|+||||+|
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~N  172 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARN  172 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccce
Confidence            99999999999998653             11234554                44568999999988

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.28  E-value=7e-12  Score=129.78  Aligned_cols=114  Identities=19%  Similarity=0.184  Sum_probs=93.6

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      +.|...+.||+|+||.||++.... ++.+|+|.+...   .....+.+.+|+.++..++|+||+++++++.+.+..++|+
T Consensus        41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  120 (335)
T 2owb_A           41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL  120 (335)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence            557778899999999999999865 789999998643   2345578999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++++|.+++..... .            ..|..-+...|+|+||+|+|
T Consensus       121 e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~N  171 (335)
T 2owb_A          121 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGN  171 (335)
T ss_dssp             CCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             ecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchh
Confidence            99999999999875321 0            01233355678999999988

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.28  E-value=4.5e-12  Score=129.68  Aligned_cols=113  Identities=20%  Similarity=0.290  Sum_probs=87.5

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEE------------
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCT------------  570 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~------------  570 (617)
                      +.|...+.||+|+||.||++.... ++.||+|++........+++.+|+.++.+++||||+++++++.            
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   90 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS   90 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred             CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence            457778899999999999999876 8899999997666666788999999999999999999999873            


Q ss_pred             --eCCeEEEEEeccCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          571 --QRDERMLIYEYLPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       571 --~~~~~~lv~E~~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                        +....++|+||++ |+|.+++......            ..|..-+...|+|+||||+|
T Consensus        91 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N  150 (320)
T 2i6l_A           91 LTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPAN  150 (320)
T ss_dssp             CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGG
T ss_pred             ccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHH
Confidence              3467899999997 7999999653211            01333456688999999998

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.27  E-value=3.3e-12  Score=130.62  Aligned_cols=124  Identities=20%  Similarity=0.300  Sum_probs=97.7

Q ss_pred             cCHHHHHHhccCCCCcceecccCceeEEEEEEc------CCcEEEEeecccCc-hhhHHHHHHHHHHHHcc-CCCcccce
Q 007129          494 FDWMAIANATENFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKSS-GQGMEEFENEVLLIAKL-QHRNLVKL  565 (617)
Q Consensus       494 ~~~~~l~~at~~f~~~~~lG~G~fG~Vykg~l~------~g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l-~H~nlv~l  565 (617)
                      +...+.....++|...+.||+|+||.||++...      .++.||||.++... ....+.+.+|+.++.++ +||||+++
T Consensus        17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~   96 (316)
T 2xir_A           17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   96 (316)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence            444455556678888999999999999999852      35789999997543 34456899999999999 79999999


Q ss_pred             EEEEEeCC-eEEEEEeccCCCCHHHHHhcCCCC-------------CcCCH----------------HHHHhhhhccccc
Q 007129          566 IGCCTQRD-ERMLIYEYLPNKSLNDFIFGFLYT-------------EHFFW----------------SFFFSFENLSLVD  615 (617)
Q Consensus       566 ~g~~~~~~-~~~lv~E~~~~GsL~~~L~~~~~~-------------~~l~w----------------~~r~~i~~~~~~~  615 (617)
                      ++++...+ ..++|+||+++|+|.++|......             ..+++                -+...|+|+||||
T Consensus        97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp  176 (316)
T 2xir_A           97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA  176 (316)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCcc
Confidence            99987754 489999999999999999875421             11333                3556789999999


Q ss_pred             CC
Q 007129          616 RN  617 (617)
Q Consensus       616 ~n  617 (617)
                      +|
T Consensus       177 ~N  178 (316)
T 2xir_A          177 RN  178 (316)
T ss_dssp             GG
T ss_pred             ce
Confidence            88

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.27  E-value=1.7e-12  Score=133.40  Aligned_cols=114  Identities=22%  Similarity=0.343  Sum_probs=80.2

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      .++|...++||+|+||.||++.... ++.||+|.++... ....+.+.+|+.++.+++||||+++++++...+..++|+|
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            3567788899999999999998764 8899999986443 2334788999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCC---CCcCCH----------------HHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLY---TEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~---~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      |++ |+|.+++.....   ...+++                -+...|+|+||||.|
T Consensus        84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~N  138 (317)
T 2pmi_A           84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQN  138 (317)
T ss_dssp             CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHH
Confidence            998 699999875321   122333                355578999999988

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.27  E-value=3.2e-12  Score=133.60  Aligned_cols=120  Identities=18%  Similarity=0.173  Sum_probs=97.6

Q ss_pred             CHHHHHHhccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCch-----------hhHHHHHHHHHHHHccCCCccc
Q 007129          495 DWMAIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSG-----------QGMEEFENEVLLIAKLQHRNLV  563 (617)
Q Consensus       495 ~~~~l~~at~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~-----------~~~~~f~~Ev~~l~~l~H~nlv  563 (617)
                      ...++....+.|...+.||+|+||.||++....++.||||++.....           ...+.+.+|+.++.+++||||+
T Consensus        13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv   92 (362)
T 3pg1_A           13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL   92 (362)
T ss_dssp             HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence            35677788899999999999999999999987899999999853211           1237899999999999999999


Q ss_pred             ceEEEEEeC-----CeEEEEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          564 KLIGCCTQR-----DERMLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       564 ~l~g~~~~~-----~~~~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++++++...     ...++|+||++ |+|.+++....  ..+++.                +...|+|+||||+|
T Consensus        93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~N  164 (362)
T 3pg1_A           93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR--IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGN  164 (362)
T ss_dssp             CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHH
Confidence            999998653     35799999997 79999987653  234443                55678999999998

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.27  E-value=4.1e-12  Score=127.69  Aligned_cols=115  Identities=23%  Similarity=0.276  Sum_probs=93.7

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      .++|...+.||+|+||.||++.... +..||||.+....   ....+.+.+|+.++.+++||||+++++++......++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            4567778899999999999998865 7789999986432   22346799999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +||+++|+|.+++..... .            ..|..-+...|+|+||+|+|
T Consensus        88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~N  139 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN  139 (279)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGG
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHh
Confidence            999999999999975421 0            01233456689999999988

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.27  E-value=6.1e-12  Score=127.05  Aligned_cols=110  Identities=31%  Similarity=0.443  Sum_probs=89.1

Q ss_pred             CCCCcc-eecccCceeEEEEEEc---CCcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          505 NFSDKN-KLGEGGFGPVYKGVLI---EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       505 ~f~~~~-~lG~G~fG~Vykg~l~---~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++...+ +||+|+||.||++...   .+..||||.++.. .....+++.+|+.++.+++||||+++++++ +.+..++|+
T Consensus        10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~   88 (287)
T 1u59_A           10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM   88 (287)
T ss_dssp             GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred             HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence            333344 8999999999999864   4778999999754 344567899999999999999999999999 566789999


Q ss_pred             eccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ||+++++|.+++....  ..+++.                +...|+|+||+|+|
T Consensus        89 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N  140 (287)
T 1u59_A           89 EMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARN  140 (287)
T ss_dssp             ECCTTEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             EeCCCCCHHHHHHhCC--ccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchhe
Confidence            9999999999997543  234444                45578999999987

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.27  E-value=9e-12  Score=124.81  Aligned_cols=114  Identities=19%  Similarity=0.286  Sum_probs=94.2

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...+.||+|+||.||++... .++.||||.+....   ....+.+.+|+.++..++||||+++++++......++|+
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (276)
T 2h6d_A           11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM   90 (276)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence            56777889999999999999986 48999999986432   233568999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++++|.+++.....-             ..|..-+...|+|+||+|+|
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~N  141 (276)
T 2h6d_A           91 EYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPEN  141 (276)
T ss_dssp             ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGG
T ss_pred             eccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhh
Confidence            999999999999754310             01334466688999999987

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.27  E-value=7.7e-12  Score=128.05  Aligned_cols=111  Identities=22%  Similarity=0.180  Sum_probs=89.3

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccC--chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS--SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...++||+|+||.||++... +++.||||++...  ......++..|+..+.++ +||||+++++++.+++..+|||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            45788889999999999999987 4899999988643  233345566677666665 8999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      ||+ +++|.+++....  ..++|..                ...|+|+||||+|
T Consensus       137 e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~N  187 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPAN  187 (311)
T ss_dssp             ECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             ecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHH
Confidence            999 779999987643  2366654                4468999999998

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.27  E-value=1.5e-11  Score=125.09  Aligned_cols=110  Identities=21%  Similarity=0.284  Sum_probs=93.3

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      +.|...+.||+|+||.||++.... ++.||||.+.... ....+.+.+|+.++.+++||||+++++++......++|+||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  101 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY  101 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence            457777899999999999998754 8899999986432 34567899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +++++|.+++...    .+++.                +...|+|+||+|+|
T Consensus       102 ~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~N  149 (303)
T 3a7i_A          102 LGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSEKKIHRDIKAAN  149 (303)
T ss_dssp             CTTEEHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             CCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhe
Confidence            9999999999653    24444                45578999999987

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.27  E-value=8.9e-12  Score=127.40  Aligned_cols=115  Identities=13%  Similarity=0.085  Sum_probs=94.2

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      .++|...+.||+|+||.||++.... ++.||+|.+....   ....+.+.+|+.++.+++||||+++++++...+..++|
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            3678888999999999999999864 8899999986432   23347899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +||+++++|.+++..... .            ..|..-+...|+|+||+|+|
T Consensus       113 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~N  164 (309)
T 2h34_A          113 MRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPEN  164 (309)
T ss_dssp             EECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHH
Confidence            999999999999975421 0            01233355678999999987

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.27  E-value=1.2e-11  Score=125.12  Aligned_cols=109  Identities=22%  Similarity=0.314  Sum_probs=88.7

Q ss_pred             CCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEe----CCeEEEE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ----RDERMLI  578 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~----~~~~~lv  578 (617)
                      |...++||+|+||.||++.... +..||+|.+...  .....+.|.+|+.++.+++||||+++++++..    ....++|
T Consensus        28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv  107 (290)
T 1t4h_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence            5556789999999999998865 788999998643  34456789999999999999999999999875    3557999


Q ss_pred             EeccCCCCHHHHHhcCCCCCcCCHH----------------HHHh--hhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFS--FENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~--i~~~~~~~~n  617 (617)
                      +||+++|+|.+++....   .+++.                +...  |+|+||+|+|
T Consensus       108 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~N  161 (290)
T 1t4h_A          108 TELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDN  161 (290)
T ss_dssp             EECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGG
T ss_pred             EEecCCCCHHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHH
Confidence            99999999999997632   23443                3335  9999999988

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.27  E-value=3.5e-12  Score=131.73  Aligned_cols=115  Identities=24%  Similarity=0.333  Sum_probs=91.4

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch--hhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG--QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~--~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      ..++|...++||+|+||.||++.... ++.||||+++....  ...+.+.+|+.++.+++||||+++++++......++|
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  111 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI  111 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence            44678888999999999999998754 88999999964322  2346788999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +||++ |+|.+++.....-             ..|..-+...|+|+||||+|
T Consensus       112 ~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~N  162 (329)
T 3gbz_A          112 FEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQN  162 (329)
T ss_dssp             EECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             EecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHH
Confidence            99997 5999999765320             11334456689999999998

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.27  E-value=9.9e-12  Score=125.98  Aligned_cols=115  Identities=20%  Similarity=0.225  Sum_probs=93.1

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---------hhhHHHHHHHHHHHHccC-CCcccceEEEEEe
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---------GQGMEEFENEVLLIAKLQ-HRNLVKLIGCCTQ  571 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---------~~~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~  571 (617)
                      .++|...+.||+|+||.||++.... ++.||||.++...         ....+.+.+|+.++.+++ ||||+++++++..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            4667788899999999999999865 8899999986432         122467889999999995 9999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          572 RDERMLIYEYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       572 ~~~~~lv~E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ....++|+||+++++|.+++..... .            ..|..-+...|+|+||+|+|
T Consensus        96 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~N  154 (298)
T 1phk_A           96 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPEN  154 (298)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcce
Confidence            9999999999999999999976421 0            01233355678999999987

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.27  E-value=8.8e-12  Score=127.28  Aligned_cols=114  Identities=20%  Similarity=0.294  Sum_probs=92.0

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...+.||+|+||.||++... +++.||||.+...   .....+++.+|+.++.+++||||+++++++...+..++|+
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  111 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL  111 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence            45777889999999999999975 4899999998642   3345578999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCC-CCCcCCH----------------HHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFL-YTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~-~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.+++.... ....+++                -+...|+|+||+|+|
T Consensus       112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~N  166 (310)
T 2wqm_A          112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPAN  166 (310)
T ss_dssp             ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHH
Confidence            9999999999996421 1122333                355678999999987

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.27  E-value=1.9e-12  Score=136.14  Aligned_cols=115  Identities=17%  Similarity=0.153  Sum_probs=85.8

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHH-HHccCCCcccceEEEEEeCCeEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLL-IAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~-l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      .++|...+.||+|+||.||++.... ++.||+|.+++..   ....+.+.+|..+ +..++||||+++++++...+..++
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l  116 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF  116 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence            3568888999999999999999875 7899999996532   2334566777776 567899999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||||+++|+|.++|.....-             ..|..-+...|+|+||||.|
T Consensus       117 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~N  169 (373)
T 2r5t_A          117 VLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPEN  169 (373)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHH
Confidence            99999999999999754310             12444567789999999998

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.27  E-value=5e-12  Score=131.44  Aligned_cols=111  Identities=18%  Similarity=0.243  Sum_probs=90.2

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEEEe
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      .++|...+.||+|+||.||++.... ++.||||.++....    .+.+|++++.++ +||||+++++++.+....++|||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E   96 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE   96 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence            3557778899999999999999865 88999999965432    245678888887 79999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+++|+|.+++.....-             ..|..-+...|+|+||||+|
T Consensus        97 ~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~N  146 (342)
T 2qr7_A           97 LMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSN  146 (342)
T ss_dssp             CCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHH
Confidence            99999999999765320             11334466689999999998

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.26  E-value=5.4e-12  Score=137.64  Aligned_cols=114  Identities=25%  Similarity=0.248  Sum_probs=94.7

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      +.|...++||+|+||.||++... .++.||||.+...  .....+.+.+|+.++.+++||||+++++++......++|+|
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  101 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence            45777789999999999999986 4889999998642  23345789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+++|+|.+++.....-             ..|..-+...|+|+||||.|
T Consensus       102 ~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~N  151 (486)
T 3mwu_A          102 LYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPEN  151 (486)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHH
Confidence            99999999988754310             11344467789999999998

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.26  E-value=4.4e-12  Score=130.71  Aligned_cols=114  Identities=24%  Similarity=0.302  Sum_probs=92.1

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccC-CCcccceEEEEEe--------C
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQ-HRNLVKLIGCCTQ--------R  572 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~--------~  572 (617)
                      ..+|...++||+|+||.||++.... ++.||||++........+.+.+|+.++.++. ||||+++++++..        .
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            3467778899999999999999764 8899999987666666778999999999996 9999999999953        3


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCCCCCcCCHHHHH----------------h--hhhcccccCC
Q 007129          573 DERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFFF----------------S--FENLSLVDRN  617 (617)
Q Consensus       573 ~~~~lv~E~~~~GsL~~~L~~~~~~~~l~w~~r~----------------~--i~~~~~~~~n  617 (617)
                      ...++|+||++ |+|.++|........+++..+.                .  |+|+||||+|
T Consensus       107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~N  168 (337)
T 3ll6_A          107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVEN  168 (337)
T ss_dssp             EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGG
T ss_pred             ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCccc
Confidence            34789999995 8999998753223346665443                4  9999999988

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.26  E-value=4.2e-12  Score=128.69  Aligned_cols=113  Identities=22%  Similarity=0.346  Sum_probs=91.6

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEe-----------
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ-----------  571 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~-----------  571 (617)
                      ++|...+.||+|+||.||++... +++.||||.+.. .....+.+.+|+.++.+++||||+++++++.+           
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV   84 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE-EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec-cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence            45777789999999999999975 488999999964 34456789999999999999999999998865           


Q ss_pred             --CCeEEEEEeccCCCCHHHHHhcCCCCC--------------cCCHHHHHhhhhcccccCC
Q 007129          572 --RDERMLIYEYLPNKSLNDFIFGFLYTE--------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       572 --~~~~~lv~E~~~~GsL~~~L~~~~~~~--------------~l~w~~r~~i~~~~~~~~n  617 (617)
                        ....++|+||+++|+|.+++.......              .|..-+...|+|+||+|+|
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~N  146 (303)
T 1zy4_A           85 KKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMN  146 (303)
T ss_dssp             -CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             ccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHh
Confidence              346789999999999999998543110              1233356688999999988

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.26  E-value=8e-12  Score=125.12  Aligned_cols=114  Identities=22%  Similarity=0.257  Sum_probs=93.3

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ++|...+.||+|+||.||++.... ++.||||.+... .....+.+.+|+.++..++||||+++++++.+.+..++|+||
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence            457777899999999999999864 889999998643 234457899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +++++|.+++.....-             ..|..-+...|+|+||+|+|
T Consensus        87 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~N  135 (276)
T 2yex_A           87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN  135 (276)
T ss_dssp             CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             cCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHH
Confidence            9999999998654210             01233355678999999987

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.26  E-value=1.2e-11  Score=127.66  Aligned_cols=108  Identities=19%  Similarity=0.331  Sum_probs=87.0

Q ss_pred             hccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHcc--CCCcccceEEEEEeC----CeE
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKL--QHRNLVKLIGCCTQR----DER  575 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l--~H~nlv~l~g~~~~~----~~~  575 (617)
                      ..++|...++||+|+||.||++... ++.||||++...   ....+..|.+++..+  +||||+++++++...    ...
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  110 (337)
T 3mdy_A           35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL  110 (337)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred             cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence            3467888899999999999999874 889999998532   334555666666554  899999999999887    788


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCcCCHHHHH------------------------hhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYTEHFFWSFFF------------------------SFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~~~l~w~~r~------------------------~i~~~~~~~~n  617 (617)
                      ++||||+++|+|.++|....    +++..+.                        .|+|+||||+|
T Consensus       111 ~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~N  172 (337)
T 3mdy_A          111 YLITDYHENGSLYDYLKSTT----LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKN  172 (337)
T ss_dssp             EEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGG
T ss_pred             EEEEeccCCCcHHHHhhccC----CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHH
Confidence            99999999999999996542    4554332                        78999999998

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.26  E-value=8.8e-12  Score=128.64  Aligned_cols=109  Identities=18%  Similarity=0.157  Sum_probs=90.6

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ++|...+.||+|+||.||++... .++.||||.+....  ..+++.+|+.++.++ +||||+++++++......++||||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~   86 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL   86 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred             CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence            56777889999999999999974 48899999986432  234688999999999 999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      + +++|.+++....  ..+++.                +...|+|+||||+|
T Consensus        87 ~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~N  135 (330)
T 2izr_A           87 L-GPSLEDLFDLCD--RTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPEN  135 (330)
T ss_dssp             C-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             C-CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHH
Confidence            9 999999998642  234444                55578999999998

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.25  E-value=3.1e-12  Score=134.59  Aligned_cols=110  Identities=25%  Similarity=0.425  Sum_probs=88.4

Q ss_pred             CCCcceecccCceeEEEEEEcC--C--cEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEe-CCeEEEEE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE--G--QEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ-RDERMLIY  579 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~--g--~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~-~~~~~lv~  579 (617)
                      |...++||+|+||.||+|...+  +  ..||||.++.. .....++|.+|+.++.+++||||+++++++.+ .+..++|+
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~  170 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  170 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence            4456789999999999998743  2  36899998753 33456789999999999999999999999865 45779999


Q ss_pred             eccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.++|.....  .+++.                +...|+|+||||+|
T Consensus       171 e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  222 (373)
T 3c1x_A          171 PYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARN  222 (373)
T ss_dssp             ECCTTCBHHHHHHCTTC--CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             ECCCCCCHHHHHhhccc--CCCHHHHHHHHHHHHHHHHHHHHCCEecCccchhe
Confidence            99999999999976432  23433                45578999999998

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.25  E-value=1e-11  Score=129.02  Aligned_cols=113  Identities=19%  Similarity=0.228  Sum_probs=92.8

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccC--chhhHHHHHHHHHHHHccCC--CcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQH--RNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H--~nlv~l~g~~~~~~~~~lv~  579 (617)
                      +.|...++||+|+||.||++...+++.||||++...  .....+.|.+|+.++.+++|  +||+++++++......++||
T Consensus         9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~   88 (343)
T 3dbq_A            9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM   88 (343)
T ss_dssp             CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence            457778899999999999999888999999998643  34455789999999999976  99999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      | +.+|+|.+++.....-             ..|..-+...|+|+||||+|
T Consensus        89 e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~N  138 (343)
T 3dbq_A           89 E-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN  138 (343)
T ss_dssp             C-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             e-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcce
Confidence            9 5688999999865310             01233355679999999998

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.25  E-value=5.1e-12  Score=128.30  Aligned_cols=116  Identities=18%  Similarity=0.211  Sum_probs=80.3

Q ss_pred             hccCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ..++|...+.||+|+||.||++... .++.||||.+.... ....+++.+|+.++.+++||||+++++++...+..++|+
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   92 (303)
T 2vwi_A           13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM   92 (303)
T ss_dssp             CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred             chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence            4567888899999999999999875 48899999986432 334578999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcC-----CCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGF-----LYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~-----~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.+++...     .....+++.                +...|+|+||+|+|
T Consensus        93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~N  151 (303)
T 2vwi_A           93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGN  151 (303)
T ss_dssp             ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGG
T ss_pred             hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhh
Confidence            999999999999741     112234444                45578999999987

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.25  E-value=5e-12  Score=130.05  Aligned_cols=121  Identities=25%  Similarity=0.364  Sum_probs=96.9

Q ss_pred             CHHHHHHhccCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHcc-CCCcccceEEEEEe-
Q 007129          495 DWMAIANATENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQ-  571 (617)
Q Consensus       495 ~~~~l~~at~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~-  571 (617)
                      ++.++....+.|...+.||+|+||.||++... .++.||||.+... ....+++.+|+.++.++ +||||+++++++.. 
T Consensus        15 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   93 (326)
T 2x7f_A           15 DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKK   93 (326)
T ss_dssp             -CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-SSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred             cchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecC-cccHHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence            33444456678888899999999999999985 4889999998643 33457899999999998 89999999999987 


Q ss_pred             -----CCeEEEEEeccCCCCHHHHHhcCCCCCcCCH----------------HHHHhhhhcccccCC
Q 007129          572 -----RDERMLIYEYLPNKSLNDFIFGFLYTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       572 -----~~~~~lv~E~~~~GsL~~~L~~~~~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                           ....++|+||+++|+|.+++.... ...+++                -+...|+|+||+|+|
T Consensus        94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~N  159 (326)
T 2x7f_A           94 NPPGMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQN  159 (326)
T ss_dssp             C--CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGG
T ss_pred             cCccccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHH
Confidence                 467899999999999999997642 122333                355578999999987

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.24  E-value=1.4e-11  Score=127.24  Aligned_cols=114  Identities=22%  Similarity=0.343  Sum_probs=92.8

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ++|...+.||+|+||.||++.... ++.||||++....  ....+.+.+|+.++.+++||||+++++++......++|+|
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  104 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE  104 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence            457777899999999999999865 8899999985432  2334678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+++++|.+++.....-             ..|..-+...|+|+||+|+|
T Consensus       105 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~N  154 (331)
T 4aaa_A          105 FVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPEN  154 (331)
T ss_dssp             CCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             cCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChhe
Confidence            99999999887654310             01233355678999999988

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.24  E-value=6.8e-12  Score=126.07  Aligned_cols=109  Identities=28%  Similarity=0.380  Sum_probs=88.9

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEe-----------
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ-----------  571 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~-----------  571 (617)
                      .+|...+.||+|+||.||++... +++.||+|.+....    +.+.+|+.++.+++||||+++++++..           
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   86 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN   86 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence            45777889999999999999986 48999999986432    357789999999999999999998854           


Q ss_pred             -----CCeEEEEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          572 -----RDERMLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       572 -----~~~~~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                           ....++|+||+++|+|.++|.... ...+++.                +...|+|+||+|+|
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~N  152 (284)
T 2a19_B           87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSN  152 (284)
T ss_dssp             --CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             ccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHH
Confidence                 345789999999999999997542 2234544                44578899999988

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.24  E-value=6.9e-12  Score=127.25  Aligned_cols=112  Identities=23%  Similarity=0.378  Sum_probs=89.1

Q ss_pred             cCCCCcceecccCceeEEEEEEcC----CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEe-CCeEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE----GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ-RDERML  577 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~----g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~-~~~~~l  577 (617)
                      ..|...++||+|+||.||++...+    ...+|+|.+... .....+.|.+|+.++.+++||||+++++++.+ .+..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            346667899999999999998753    235899998753 33455789999999999999999999998755 457799


Q ss_pred             EEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |+||+++|+|.+++.....  .+++.                +...|+|+||||+|
T Consensus       105 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~N  158 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARN  158 (298)
T ss_dssp             EEECCTTCBHHHHHHCTTC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             EEeCCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchhe
Confidence            9999999999999976432  23433                55578899999988

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.24  E-value=2.8e-12  Score=134.00  Aligned_cols=114  Identities=22%  Similarity=0.195  Sum_probs=92.9

Q ss_pred             cCCCCcceecccCceeEEEEEEc----CCcEEEEeecccCc----hhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI----EGQEIAAKRLSKSS----GQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDE  574 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~----~g~~vAvK~l~~~~----~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~  574 (617)
                      ++|...++||+|+||.||++...    .++.||||.++...    ....+.+.+|+.++.++ +||||+++++++.....
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            56777889999999999999873    58899999986432    23346688899999999 79999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      .+|||||+++|+|.++|.....-             ..|..-+...|+|+||||+|
T Consensus       134 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~N  189 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLEN  189 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             EEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH
Confidence            99999999999999999764310             11334456679999999998

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.24  E-value=8.4e-12  Score=127.63  Aligned_cols=118  Identities=25%  Similarity=0.387  Sum_probs=89.2

Q ss_pred             HHhccCCCCcceecccCceeEEEEEEcC----CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCC
Q 007129          500 ANATENFSDKNKLGEGGFGPVYKGVLIE----GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD  573 (617)
Q Consensus       500 ~~at~~f~~~~~lG~G~fG~Vykg~l~~----g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~  573 (617)
                      ....++|...+.||+|+||.||++....    +..||+|.++..  .....+.|.+|+.++.+++||||+++++++....
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~  109 (313)
T 3brb_A           30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS  109 (313)
T ss_dssp             BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred             ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence            3345677888899999999999998753    347999998643  3344578999999999999999999999998755


Q ss_pred             e-----EEEEEeccCCCCHHHHHhcCC---CCCcCCHH----------------HHHhhhhcccccCC
Q 007129          574 E-----RMLIYEYLPNKSLNDFIFGFL---YTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       574 ~-----~~lv~E~~~~GsL~~~L~~~~---~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      .     .++|+||+++|+|.++|....   ....+++.                +...|+|+||||+|
T Consensus       110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~N  177 (313)
T 3brb_A          110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARN  177 (313)
T ss_dssp             -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGG
T ss_pred             ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcce
Confidence            3     499999999999999995432   12335554                44568999999988

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.24  E-value=8.4e-12  Score=126.43  Aligned_cols=110  Identities=29%  Similarity=0.361  Sum_probs=88.4

Q ss_pred             CCCcceecccCceeEEEEEEcC-C---cEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeE-EEEE
Q 007129          506 FSDKNKLGEGGFGPVYKGVLIE-G---QEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDER-MLIY  579 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~~-g---~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~-~lv~  579 (617)
                      |...++||+|+||.||++...+ +   ..+|+|.+.... ....+.|.+|+.++.+++||||+++++++...+.. ++|+
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  102 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL  102 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence            3445789999999999998743 2   379999987543 34567899999999999999999999999876655 8999


Q ss_pred             eccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ||+.+|+|.+++.....  .+++.                +...|+|+||||+|
T Consensus       103 e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~N  154 (298)
T 3pls_A          103 PYMCHGDLLQFIRSPQR--NPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARN  154 (298)
T ss_dssp             CCCTTCBHHHHHHCTTC--CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             ecccCCCHHHHHhcccc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcce
Confidence            99999999999987432  23443                45568899999988

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.24  E-value=4.1e-12  Score=131.93  Aligned_cols=113  Identities=21%  Similarity=0.264  Sum_probs=93.1

Q ss_pred             ccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhh-----------------HHHHHHHHHHHHccCCCcccce
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQG-----------------MEEFENEVLLIAKLQHRNLVKL  565 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~-----------------~~~f~~Ev~~l~~l~H~nlv~l  565 (617)
                      .++|...+.||+|+||.||++.. +++.||||.+.......                 .+.|.+|+.++.+++||||+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            35788889999999999999998 89999999986432111                 1789999999999999999999


Q ss_pred             EEEEEeCCeEEEEEeccCCCCHHHH------HhcCCCCCcCCHH----------------HH-HhhhhcccccCC
Q 007129          566 IGCCTQRDERMLIYEYLPNKSLNDF------IFGFLYTEHFFWS----------------FF-FSFENLSLVDRN  617 (617)
Q Consensus       566 ~g~~~~~~~~~lv~E~~~~GsL~~~------L~~~~~~~~l~w~----------------~r-~~i~~~~~~~~n  617 (617)
                      ++++...+..++||||+++|+|.++      +.... ...+++.                +. ..|+|+||+|+|
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~N  182 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSN  182 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGG
T ss_pred             EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHh
Confidence            9999999999999999999999999      54421 2335554                33 678999999987

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.23  E-value=4.8e-12  Score=128.08  Aligned_cols=113  Identities=24%  Similarity=0.332  Sum_probs=88.3

Q ss_pred             cCCCCcc-eecccCceeEEEEEEc---CCcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          504 ENFSDKN-KLGEGGFGPVYKGVLI---EGQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       504 ~~f~~~~-~lG~G~fG~Vykg~l~---~g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      +.|...+ .||+|+||.||++...   .++.||||.++...  ....++|.+|+.++..++||||+++++++ +.+..++
T Consensus        16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l   94 (291)
T 1xbb_A           16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML   94 (291)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred             hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence            4455555 8999999999999653   26789999997532  23357899999999999999999999999 6677899


Q ss_pred             EEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+||+++++|.+++.....-             ..|..-+...|+|+||+|+|
T Consensus        95 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~N  147 (291)
T 1xbb_A           95 VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARN  147 (291)
T ss_dssp             EEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             EEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcce
Confidence            99999999999999864310             01333356678999999988

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.23  E-value=9.8e-12  Score=127.78  Aligned_cols=113  Identities=19%  Similarity=0.236  Sum_probs=88.0

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--------hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--------GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDE  574 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--------~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~  574 (617)
                      ++|...+.||+|+||.||++.... ++.||||.+....        ......|.+|+.++.+++||||+++++++.... 
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   88 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-   88 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence            457778899999999999999865 7899999986431        112345899999999999999999999986654 


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      .++|+||+++|+|.+++.....-             ..|..-+...|+|+||+|+|
T Consensus        89 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~N  144 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPEN  144 (322)
T ss_dssp             EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH
Confidence            89999999999999999764321             01333356689999999988

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.23  E-value=1e-11  Score=125.19  Aligned_cols=114  Identities=20%  Similarity=0.267  Sum_probs=92.8

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...+.||+|+||.||++.... ++.||+|.+....   ....+.+.+|+.++.+++||||+++++++...+..++|+
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            557778899999999999999865 7889999986431   223467999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.+++.....-             ..|..-+...|+|+||+|+|
T Consensus        94 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~N  144 (284)
T 2vgo_A           94 EFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPEN  144 (284)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGG
T ss_pred             EeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHH
Confidence            999999999999764310             01233355678999999987

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.23  E-value=1.9e-11  Score=123.87  Aligned_cols=112  Identities=26%  Similarity=0.383  Sum_probs=90.3

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ++|...+.||+|+||.||++.... ++.||||.+....  ....+.+.+|+.++.+++||||+++++++...+..++|+|
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            567778899999999999999864 8999999986432  2234688999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCCH----------------HHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      |++ |+|.+++..... ..+++                -+...|+|+||+|+|
T Consensus        83 ~~~-~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~N  133 (299)
T 2r3i_A           83 FLH-QDLKKFMDASAL-TGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN  133 (299)
T ss_dssp             CCS-EEHHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             ccc-CCHHHHHHhhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHH
Confidence            997 799999976532 22333                355678999999988

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.23  E-value=8.7e-12  Score=127.51  Aligned_cols=114  Identities=25%  Similarity=0.370  Sum_probs=89.0

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ..+.|...+.||+|+||.||++.... ++.||+|.+...  ...+++.+|+.++.+++||||+++++++......++|+|
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            34668888999999999999999865 899999998643  345789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+++|+|.+++......              ..|..-+...|+|+||+|+|
T Consensus       105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~N  155 (314)
T 3com_A          105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGN  155 (314)
T ss_dssp             CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHH
Confidence            99999999999632211              01333456688999999987

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.23  E-value=1.1e-11  Score=134.02  Aligned_cols=113  Identities=15%  Similarity=0.261  Sum_probs=83.3

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeC-----CeE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR-----DER  575 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~-----~~~  575 (617)
                      ++|...++||+|+||.||++.... ++.||||++...  .....+.+.+|+.++.+++|||||++++++...     ...
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  132 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL  132 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence            568888999999999999998764 889999998643  334457899999999999999999999998543     568


Q ss_pred             EEEEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++|+||+ +|+|.+++.....-             ..|..-+...|+|+||||+|
T Consensus       133 ~lv~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~N  186 (458)
T 3rp9_A          133 YVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPAN  186 (458)
T ss_dssp             EEEECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG
T ss_pred             EEEEecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhh
Confidence            9999998 57999999764310             01334466689999999998

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.23  E-value=4.9e-12  Score=130.91  Aligned_cols=113  Identities=19%  Similarity=0.263  Sum_probs=87.5

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCc--------hhhHHHHHHHHHHHHccC---------CCcccceE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSS--------GQGMEEFENEVLLIAKLQ---------HRNLVKLI  566 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~--------~~~~~~f~~Ev~~l~~l~---------H~nlv~l~  566 (617)
                      ++|...++||+|+||.||++.. .++.||||+++...        ....+.+.+|+.++.+++         |||+|++.
T Consensus        20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~   98 (336)
T 2vuw_A           20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN   98 (336)
T ss_dssp             HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred             ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence            4566778999999999999987 68999999997432        223478999999998885         88998888


Q ss_pred             EEEE------------------------------eCCeEEEEEeccCCCCHHHHHhcCCCC------------CcCCHHH
Q 007129          567 GCCT------------------------------QRDERMLIYEYLPNKSLNDFIFGFLYT------------EHFFWSF  604 (617)
Q Consensus       567 g~~~------------------------------~~~~~~lv~E~~~~GsL~~~L~~~~~~------------~~l~w~~  604 (617)
                      +.+.                              .....+|||||+++|+|.+.+.+....            ..|...+
T Consensus        99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~lH  178 (336)
T 2vuw_A           99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAE  178 (336)
T ss_dssp             EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence            8654                              167899999999999877777542211            1134446


Q ss_pred             -HHhhhhcccccCC
Q 007129          605 -FFSFENLSLVDRN  617 (617)
Q Consensus       605 -r~~i~~~~~~~~n  617 (617)
                       ...|+|+||||+|
T Consensus       179 ~~~~ivHrDlKp~N  192 (336)
T 2vuw_A          179 ASLRFEHRDLHWGN  192 (336)
T ss_dssp             HHHCCBCSCCCGGG
T ss_pred             HhCCEeECCCCHHH
Confidence             7899999999998

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.22  E-value=2.2e-11  Score=127.66  Aligned_cols=115  Identities=17%  Similarity=0.235  Sum_probs=94.4

Q ss_pred             HHhccCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCch--------hhHHHHHHHHHHHHcc-CCCcccceEEEE
Q 007129          500 ANATENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSG--------QGMEEFENEVLLIAKL-QHRNLVKLIGCC  569 (617)
Q Consensus       500 ~~at~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~--------~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~  569 (617)
                      ....++|...+.||+|+||.||++... +|+.||||.++....        ...+.+.+|+.++.++ +||||+++++++
T Consensus        90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  169 (365)
T 2y7j_A           90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY  169 (365)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence            344566888889999999999999986 489999999864321        1235688999999999 799999999999


Q ss_pred             EeCCeEEEEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          570 TQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       570 ~~~~~~~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ......++||||+++|+|.+++....   .+++.                ++..|+|+||+|.|
T Consensus       170 ~~~~~~~lv~e~~~g~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~N  230 (365)
T 2y7j_A          170 ESSSFMFLVFDLMRKGELFDYLTEKV---ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPEN  230 (365)
T ss_dssp             EBSSEEEEEECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             eeCCEEEEEEEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence            99999999999999999999997542   24443                44678999999988

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.22  E-value=6.1e-12  Score=130.36  Aligned_cols=112  Identities=21%  Similarity=0.294  Sum_probs=92.4

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch--------hhHHHHHHHHHHHHccCCCcccceEEEEEeCC
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG--------QGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD  573 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~--------~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~  573 (617)
                      .++|...+.||+|+||.||++.... ++.||||.++....        ...+.+.+|+.++.+++||||+++++++...+
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            3567888899999999999998754 88999999864321        13346888999999999999999999999999


Q ss_pred             eEEEEEeccCCC-CHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          574 ERMLIYEYLPNK-SLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       574 ~~~lv~E~~~~G-sL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ..++|+||+..| +|.+++....   .+++.                +...|+|+||||+|
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~N  160 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDEN  160 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHHTCC---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             EEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHH
Confidence            999999999877 9999997653   24443                45578899999998

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.22  E-value=2.1e-11  Score=123.11  Aligned_cols=115  Identities=24%  Similarity=0.258  Sum_probs=94.2

Q ss_pred             ccCCCCcceecccCceeEEEEEEc-CCcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      .+.|...++||+|+||.||++... .++.||+|.+...  .....+.+.+|+.++.+++||||+++++++......++|+
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  100 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence            356788899999999999999986 4889999998643  2345678999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++++|.+++..... .            ..|..-+...|+|+||+|+|
T Consensus       101 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~N  151 (287)
T 2wei_A          101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPEN  151 (287)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             EccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhh
Confidence            99999999999875431 0            01233355578999999987

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.22  E-value=1e-11  Score=124.90  Aligned_cols=112  Identities=27%  Similarity=0.374  Sum_probs=90.1

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC----CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE----GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~----g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      .++|...+.||+|+||.||++....    +..||+|.+... .....+.|.+|+.++.+++||||+++++++.+ +..++
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~   89 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI   89 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence            4567778899999999999998753    236999998754 33456789999999999999999999999754 55689


Q ss_pred             EEeccCCCCHHHHHhcCCCCCcCCH----------------HHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      |+||+++++|.+++.....  .+++                -+...|+|+||+|+|
T Consensus        90 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~N  143 (281)
T 3cc6_A           90 IMELYPYGELGHYLERNKN--SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRN  143 (281)
T ss_dssp             EEECCTTCBHHHHHHHHTT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGG
T ss_pred             EEecCCCCCHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccce
Confidence            9999999999999975431  2333                355678999999988

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.21  E-value=4e-12  Score=130.98  Aligned_cols=113  Identities=28%  Similarity=0.462  Sum_probs=88.1

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-Cc----EEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQ----EIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~----~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      ++|...++||+|+||.||++.... ++    .||+|.+.... ....+++.+|+.++.+++||||+++++++. ....++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence            456677899999999999999754 43    38888875432 333467889999999999999999999885 566889


Q ss_pred             EEeccCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |+||+++|+|.+++......              ..|..-+...|+|+||||+|
T Consensus        92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~N  145 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARN  145 (325)
T ss_dssp             EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTT
T ss_pred             EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchhe
Confidence            99999999999999764211              01233356678999999998

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.21  E-value=1.9e-11  Score=131.19  Aligned_cols=111  Identities=16%  Similarity=0.237  Sum_probs=92.0

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeC-----Ce
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR-----DE  574 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~-----~~  574 (617)
                      .++|...+.||+|+||.||++.... ++.||||++...  .....+.+.+|+.++.+++||||+++++++...     ..
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            3678888999999999999999865 788999999753  334457899999999999999999999998776     56


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCCCcCCH----------------HHHHhhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLYTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      .++|+||++ |+|.+++....   .+++                -+...|+|+||||+|
T Consensus       105 ~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~N  159 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKTPI---FLTEEHIKTILYNLLLGENFIHESGIIHRDLKPAN  159 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             EEEEEecCC-cCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence            899999996 69999997643   2333                355678999999998

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=99.21  E-value=3.1e-11  Score=120.68  Aligned_cols=113  Identities=22%  Similarity=0.362  Sum_probs=87.4

Q ss_pred             cccccccCCCc----ccCCCEEEeCCCeEEEEeeCCC--CCCCcEEEEEecccCCCcEEEEcCCCCCCCCCCceEEEeec
Q 007129           16 TARDTLNLGQS----IRDGETLVSANESFELGFFSPG--KSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQ   89 (617)
Q Consensus        16 ~~~~~l~~g~~----l~~~~~lvS~~g~F~~GF~~~~--~~~~~~lgIw~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~   89 (617)
                      ..+|||.||+.    |..|+.|+|+ .+++-|+|...  ...+.+  + |.+  ..+++|.+++..+-  . ..|.+..+
T Consensus       134 ~ptdtlLpg~~~~~~l~~g~~L~S~-~dps~G~fsl~l~~dGnlv--L-y~~--~~~~yW~Sgt~~~~--~-~~l~l~~d  204 (276)
T 3m7h_A          134 TPAIPLVPGAIDSLLLAPGSELVQG-VVYGAGASKLVFQGDGNLV--A-YGP--NGAATWNAGTQGKG--A-VRAVFQGD  204 (276)
T ss_dssp             CTTSCCCCSCTTCEEECSSEEECTT-CEEEETTEEEEECTTSCEE--E-ECT--TSSEEEECCCTTTT--C-CEEEECTT
T ss_pred             ccccccccccccccccccCcccccC-CCCCCceEEEeecCCceEE--E-EeC--CCeEEEECCCCCCc--c-EEEEEcCC
Confidence            56899999999    7888888654 56777766532  222333  3 332  35899999998762  2 68999999


Q ss_pred             CCceEEEecCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecCC
Q 007129           90 GNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDY  146 (617)
Q Consensus        90 G~~~L~l~d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~  146 (617)
                      |+  |++.|.++.++|++++.. ....+++|+++|||||++.      .++||||||
T Consensus       205 Gn--Lvl~d~~~~~vWsS~t~~-~~~~rl~Ld~dGnLvly~~------~~~Wqsf~~  252 (276)
T 3m7h_A          205 GN--LVVYGAGNAVLWHSHTGG-HASAVLRLQANGSIAILDE------KPVWARFGF  252 (276)
T ss_dssp             SC--EEEECTTSCEEEECSCTT-CTTCEEEECTTSCEEEEEE------EEEEESSSC
T ss_pred             Ce--EEEEeCCCcEEEEecCCC-CCCEEEEEcCCccEEEEcC------CCeEEccCc
Confidence            99  999999888999999763 3457899999999999973      479999998

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.21  E-value=1.8e-11  Score=130.10  Aligned_cols=107  Identities=19%  Similarity=0.152  Sum_probs=83.9

Q ss_pred             CCCCc-ceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHH-ccCCCcccceEEEEEe----CCeEEE
Q 007129          505 NFSDK-NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIA-KLQHRNLVKLIGCCTQ----RDERML  577 (617)
Q Consensus       505 ~f~~~-~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~-~l~H~nlv~l~g~~~~----~~~~~l  577 (617)
                      +|... ++||+|+||.||++.... ++.||||.++.     ...+.+|+.++. ..+||||+++++++..    ....+|
T Consensus        62 ~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l  136 (400)
T 1nxk_A           62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI  136 (400)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence            34433 589999999999999865 88999999863     245778888764 4589999999998875    556899


Q ss_pred             EEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ||||+++|+|.++|.... ...+++.                +...|+|+||||+|
T Consensus       137 v~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  191 (400)
T 1nxk_A          137 VMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN  191 (400)
T ss_dssp             EEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             EEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcce
Confidence            999999999999998753 2234443                55689999999998

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.21  E-value=2.5e-11  Score=123.38  Aligned_cols=112  Identities=20%  Similarity=0.299  Sum_probs=88.3

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc----hhhHHHHHHHHHHHHccCCCcccceEEEEE--eCCeEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS----GQGMEEFENEVLLIAKLQHRNLVKLIGCCT--QRDERM  576 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~----~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~--~~~~~~  576 (617)
                      ++|...+.||+|+||.||++.... ++.||+|.+....    ....+.+.+|+.++.+++||||+++++++.  +....+
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY   84 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred             cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence            568888999999999999999854 7899999986432    234578999999999999999999999984  345789


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +|+||++++ |.+++.... ...+++.                +...|+|+||+|+|
T Consensus        85 lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~N  139 (305)
T 2wtk_C           85 MVMEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGN  139 (305)
T ss_dssp             EEEECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             EEehhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCccc
Confidence            999999876 777776543 2234443                45578899999988

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.21  E-value=1.1e-11  Score=125.28  Aligned_cols=110  Identities=24%  Similarity=0.375  Sum_probs=88.4

Q ss_pred             ccCCCCcceecccCceeEEEEEEcCCcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      .+.|...++||+|+||.||++...  ..||||.++..  .....+.|.+|+.++.+++||||+++++++ .....++|+|
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e   99 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ   99 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred             ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence            356778889999999999999863  36999998643  344567899999999999999999999975 4566889999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |+++++|.+++....  ..+++.                +...|+|+||||+|
T Consensus       100 ~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~N  150 (289)
T 3og7_A          100 WCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNN  150 (289)
T ss_dssp             CCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             ecCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccce
Confidence            999999999997543  234544                45578899999988

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.21  E-value=1e-11  Score=129.13  Aligned_cols=115  Identities=19%  Similarity=0.280  Sum_probs=87.8

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchh-----hHHHHHHHHHHHHccCCCcccceEEEEEeCCeE
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQ-----GMEEFENEVLLIAKLQHRNLVKLIGCCTQRDER  575 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~-----~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~  575 (617)
                      ..+.|...+.||+|+||.||++.... ++.||||.+......     ..+.+.+|+.++.+++||||+++++++......
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI   87 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence            34678888999999999999999865 889999998643211     124688999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++|+||+++ +|.+++......              ..|..-+...|+|+||||+|
T Consensus        88 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~N  142 (346)
T 1ua2_A           88 SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNN  142 (346)
T ss_dssp             EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHH
Confidence            999999975 899998764321              01334466789999999998

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.21  E-value=7e-12  Score=125.90  Aligned_cols=110  Identities=25%  Similarity=0.387  Sum_probs=88.8

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeC-CeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR-DERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~-~~~~lv~E~~  582 (617)
                      ++|...+.||+|+||.||++.. .++.||||.++..  ...+.|.+|+.++.+++||||+++++++.+. +..++|+||+
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~   97 (278)
T 1byg_A           21 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   97 (278)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred             hhceEEeEEecCCCceEEEEEE-cCCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence            5677788999999999999987 5889999998743  3457899999999999999999999997654 4689999999


Q ss_pred             CCCCHHHHHhcCCCCCc----------------CCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEH----------------FFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~----------------l~w~~r~~i~~~~~~~~n  617 (617)
                      ++|+|.+++.... ...                |..-+...|+|+||+|+|
T Consensus        98 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~N  147 (278)
T 1byg_A           98 AKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARN  147 (278)
T ss_dssp             TTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             CCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcce
Confidence            9999999997542 111                333356678999999988

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.20  E-value=3.4e-11  Score=124.60  Aligned_cols=109  Identities=21%  Similarity=0.374  Sum_probs=90.6

Q ss_pred             HhccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHc--cCCCcccceEEEEEeCC----e
Q 007129          501 NATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAK--LQHRNLVKLIGCCTQRD----E  574 (617)
Q Consensus       501 ~at~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~--l~H~nlv~l~g~~~~~~----~  574 (617)
                      ...++|...+.||+|+||.||++.. .++.||||.+..   ...+.+.+|++++..  ++||||+++++++....    .
T Consensus        39 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~  114 (342)
T 1b6c_B           39 TIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ  114 (342)
T ss_dssp             HHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECG---GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCC
T ss_pred             cccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCc---hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccce
Confidence            3446788889999999999999987 588999999863   344678889888887  78999999999998876    7


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCCCcCCHH----------------H--------HHhhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------F--------FFSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~--------r~~i~~~~~~~~n  617 (617)
                      .++|+||+++|+|.++|....    +++.                +        ...|+|+||||+|
T Consensus       115 ~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~N  177 (342)
T 1b6c_B          115 LWLVSDYHEHGSLFDYLNRYT----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN  177 (342)
T ss_dssp             EEEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGG
T ss_pred             eEEEEeecCCCcHHHHHhccC----ccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHH
Confidence            899999999999999997642    4443                3        4568999999988

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.20  E-value=1.6e-11  Score=126.42  Aligned_cols=111  Identities=14%  Similarity=0.307  Sum_probs=92.0

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccC-CCcccceEEEEEe--CCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQ-HRNLVKLIGCCTQ--RDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~--~~~~~lv~  579 (617)
                      ++|...++||+|+||.||++... .++.||||.++..   ..+.+.+|+.++.+++ ||||+++++++..  ....++|+
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            56778899999999999999875 4889999998643   3467999999999997 9999999999987  56789999


Q ss_pred             eccCCCCHHHHHhcCCCC----------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYT----------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~----------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++++|.+++..-...          ..|..-+...|+|+||||+|
T Consensus       113 e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~N  160 (330)
T 3nsz_A          113 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHN  160 (330)
T ss_dssp             ECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             eccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHH
Confidence            999999999998542111          12455577789999999998

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.20  E-value=1.2e-11  Score=140.46  Aligned_cols=109  Identities=18%  Similarity=0.263  Sum_probs=88.2

Q ss_pred             cCCCCcceecccCceeEEEEEEc--CCcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCe-----E
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI--EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDE-----R  575 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~--~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~-----~  575 (617)
                      +.|...++||+|+||.||++...  +++.||||.+... .....+.|.+|+.++.+++||||+++++++...+.     .
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~  159 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG  159 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence            56777889999999999999986  4789999998643 33445689999999999999999999999987655     6


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +|||||+++++|.+++..     .++|.                +...|+|+||||+|
T Consensus       160 ~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~N  212 (681)
T 2pzi_A          160 YIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPEN  212 (681)
T ss_dssp             EEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             EEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHH
Confidence            999999999999988754     24444                55578999999998

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.20  E-value=3.1e-11  Score=127.80  Aligned_cols=110  Identities=19%  Similarity=0.209  Sum_probs=92.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccC--chhhHHHHHHHHHHHHccC--CCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQ--HRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~--H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ..|...++||+|+||.||++....++.||||.+...  .....+.|.+|+.++.+++  ||||+++++++......+|||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            347788899999999999999877999999998643  3445678999999999996  599999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      | +.+++|.++|....   .+++.                +...|+|+||||+|
T Consensus       136 E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~N  185 (390)
T 2zmd_A          136 E-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN  185 (390)
T ss_dssp             E-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGG
T ss_pred             e-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHH
Confidence            9 56899999998653   24433                44578999999998

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.20  E-value=4.4e-12  Score=130.69  Aligned_cols=111  Identities=25%  Similarity=0.334  Sum_probs=88.7

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchh-hHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQ-GMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~-~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ++|...++||+|+||.||++... .++.||||.+...... ....+.+|+.++.+++||||+++++++......++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            45677789999999999999986 4889999998643222 123566899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCC----------------HHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFF----------------WSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~----------------w~~r~~i~~~~~~~~n  617 (617)
                      ++ |+|.+++.....  .++                .-+...|+|+||||+|
T Consensus        82 ~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~N  130 (324)
T 3mtl_A           82 LD-KDLKQYLDDCGN--IINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQN  130 (324)
T ss_dssp             CS-EEHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGG
T ss_pred             cc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHH
Confidence            97 699999876432  233                3355678999999998

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.19  E-value=1.8e-11  Score=138.68  Aligned_cols=116  Identities=22%  Similarity=0.151  Sum_probs=95.0

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEE
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERM  576 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~  576 (617)
                      ..++|...++||+|+||.||++.... ++.||||+++..   .....+.+..|..++..+ +||+|+++++++...+..+
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            34678888999999999999999865 789999998742   233456788999999987 7999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |||||+++|+|.++|.....-             ..|...+...|+|+||||.|
T Consensus       419 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~N  472 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDN  472 (674)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTT
T ss_pred             EEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhh
Confidence            999999999999999864310             11344466689999999998

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.19  E-value=2.1e-11  Score=128.91  Aligned_cols=114  Identities=18%  Similarity=0.374  Sum_probs=84.1

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccC-CCcccceEEEEEeCC--eEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQ-HRNLVKLIGCCTQRD--ERM  576 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~~~--~~~  576 (617)
                      .++|...++||+|+||.||++.... ++.||||++...  .....+.+.+|+.++..+. ||||+++++++...+  ..+
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~   87 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY   87 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred             cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence            4678888999999999999998754 899999998643  3445577889999999997 999999999997654  689


Q ss_pred             EEEeccCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|||||+ |+|..++......            ..|..-+...|+|+||||+|
T Consensus        88 lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~N  139 (388)
T 3oz6_A           88 LVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSN  139 (388)
T ss_dssp             EEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             EEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHH
Confidence            9999997 6999999764211            11334456678999999998

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.19  E-value=4e-11  Score=123.62  Aligned_cols=112  Identities=23%  Similarity=0.250  Sum_probs=91.0

Q ss_pred             CCCCc-ceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEEE
Q 007129          505 NFSDK-NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       505 ~f~~~-~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      .|... ++||+|+||.||++.... ++.||+|.+...  ......++.+|+.++..+ +||||+++++++......++|+
T Consensus        29 ~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~  108 (327)
T 3lm5_A           29 FYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILIL  108 (327)
T ss_dssp             HEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             EEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEE
Confidence            34433 789999999999999865 899999998743  233457899999999999 5699999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.+++.... ...+++.                +...|+|+||||+|
T Consensus       109 e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~N  161 (327)
T 3lm5_A          109 EYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQN  161 (327)
T ss_dssp             ECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             EecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHH
Confidence            9999999999996542 2234444                45578899999988

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.19  E-value=5.6e-11  Score=121.20  Aligned_cols=113  Identities=22%  Similarity=0.314  Sum_probs=86.8

Q ss_pred             ccCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCc-----hhhHHHHHHHHHHHHcc---CCCcccceEEEEEeCC
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS-----GQGMEEFENEVLLIAKL---QHRNLVKLIGCCTQRD  573 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~-----~~~~~~f~~Ev~~l~~l---~H~nlv~l~g~~~~~~  573 (617)
                      .++|...++||+|+||.||++... .++.||||.+....     ......+.+|+.++..+   +||||+++++++....
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~   87 (308)
T 3g33_A            8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR   87 (308)
T ss_dssp             --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence            567888899999999999999974 48899999986321     11234677777777666   4999999999998765


Q ss_pred             -----eEEEEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          574 -----ERMLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       574 -----~~~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                           ..++|+||++ |+|.+++..... ..+++.                +...|+|+||||+|
T Consensus        88 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~N  150 (308)
T 3g33_A           88 TDREIKVTLVFEHVD-QDLRTYLDKAPP-PGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPEN  150 (308)
T ss_dssp             SSSEEEEEEEEECCC-CBHHHHHHTCCT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTT
T ss_pred             CCCceeEEEEehhhh-cCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH
Confidence                 4789999997 699999987542 224444                45578999999998

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.18  E-value=8.1e-11  Score=101.24  Aligned_cols=96  Identities=25%  Similarity=0.329  Sum_probs=71.8

Q ss_pred             CCCCCCCCCceEEEeecCCceEEEecC-CCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecCCCcccc
Q 007129           73 RDAPLSDRSGALNISSQGNATLVLLNS-TNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHIL  151 (617)
Q Consensus        73 r~~pv~~~~~~l~l~~~G~~~L~l~d~-~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~PtDTl  151 (617)
                      .+.|+.+...+|.+..|||  |+|.+. .+.++|++++........++|+|+|||||++.+    +.++|||=.+     
T Consensus        17 ~g~~L~~g~~~L~~q~dGN--LvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~~----~~~iW~S~t~-----   85 (113)
T 3mez_B           17 DNAQLATRDYSLVMRDDCN--LVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDDR----LNTVFVSNTV-----   85 (113)
T ss_dssp             TTCEEEETTEEEEECTTSC--EEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECTT----SCEEEECSCC-----
T ss_pred             CCCEeEcCCEEEEEcCCCE--EEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECCC----CCEEEECCCc-----
Confidence            3556655567899999999  999998 488999999863334568999999999999863    5689997321     


Q ss_pred             cCCceeeeeeecCceeEEEEcccCCCCCCeeeEEEeCCCCCcEEEEEcCCeeeEeeCC
Q 007129          152 IAGMKLGVNLVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGS  209 (617)
Q Consensus       152 Lpgq~L~~~~~tg~~~~l~Sw~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~~~g~  209 (617)
                                                ...|.|.+.++++|...++  .  .+.|.+|+
T Consensus        86 --------------------------~~~~~~~~~L~~dGnlvly--~--~~~W~s~~  113 (113)
T 3mez_B           86 --------------------------GQEGDYVLILQINGQAVVY--G--PAVWSTAA  113 (113)
T ss_dssp             --------------------------CSSSCCEEEECTTSCEEEE--C--SEEEESCC
T ss_pred             --------------------------CCCCCEEEEEcCCceEEEe--c--CCEecCCC
Confidence                                      0124578999999976554  3  47788764

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.18  E-value=3.9e-11  Score=121.95  Aligned_cols=108  Identities=19%  Similarity=0.168  Sum_probs=86.1

Q ss_pred             cCCCCc-ceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHH-HccCCCcccceEEEEEe----CCeEE
Q 007129          504 ENFSDK-NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLI-AKLQHRNLVKLIGCCTQ----RDERM  576 (617)
Q Consensus       504 ~~f~~~-~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l-~~l~H~nlv~l~g~~~~----~~~~~  576 (617)
                      ++|... +.||+|+||.||++.... ++.||+|.++.     ...+.+|+.++ ..++||||+++++++..    ....+
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   91 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   91 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence            344444 679999999999999854 88999999863     24577888877 55699999999999877    66789


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +||||+++|+|.+++.... ...+++.                +...|+|+||||+|
T Consensus        92 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~N  147 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN  147 (299)
T ss_dssp             EEECCCCSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             EEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH
Confidence            9999999999999998753 2234443                55678999999998

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.18  E-value=1.7e-11  Score=126.39  Aligned_cols=111  Identities=27%  Similarity=0.420  Sum_probs=89.8

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-Cc----EEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQ----EIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~----~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      ++|...++||+|+||.||++.... ++    .||+|.+... .....+++.+|+.++.+++||||+++++++.... .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~   93 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence            567778899999999999999754 43    4688887543 3445678999999999999999999999998754 789


Q ss_pred             EEeccCCCCHHHHHhcCCCCCcCCH----------------HHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      |+||+++|+|.+++.....  .+++                -+...|+|+||||+|
T Consensus        94 v~~~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~N  147 (327)
T 3lzb_A           94 ITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARN  147 (327)
T ss_dssp             EECCCSSCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             EEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHH
Confidence            9999999999999986432  2333                355678999999998

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.18  E-value=2.5e-11  Score=137.04  Aligned_cols=113  Identities=26%  Similarity=0.322  Sum_probs=91.6

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC----CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEE
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE----GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERM  576 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~----g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~  576 (617)
                      ..+.|...+.||+|+||.||+|....    +..||||.++.. .....+.|.+|+.++.+++||||+++++++. .+..+
T Consensus       388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~  466 (656)
T 2j0j_A          388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW  466 (656)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred             ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence            34567778899999999999998853    457999998753 3344578999999999999999999999984 46689


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +||||+++|+|.++|....  ..+++.                +...|+|+||||+|
T Consensus       467 lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~N  521 (656)
T 2j0j_A          467 IIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARN  521 (656)
T ss_dssp             EEEECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             EEEEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHh
Confidence            9999999999999997643  235554                34578899999998

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.17  E-value=1.5e-11  Score=129.07  Aligned_cols=114  Identities=18%  Similarity=0.283  Sum_probs=85.4

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCC------
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD------  573 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~------  573 (617)
                      .+.|...+.||+|+||.||++.... |+.||||++...  .....+.+.+|+.++..++||||+++++++....      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            3567778899999999999999854 899999998542  3334578999999999999999999999997653      


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          574 ERMLIYEYLPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       574 ~~~lv~E~~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ..++|+||+ +++|.+++......            ..|..-+...|+|+||||+|
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~N  158 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGN  158 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             eEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHH
Confidence            459999999 88999999764211            11334466689999999998

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.16  E-value=7.7e-11  Score=121.63  Aligned_cols=107  Identities=29%  Similarity=0.450  Sum_probs=82.1

Q ss_pred             ccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHH--HHccCCCcccceEEEEEe-----CCeE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLL--IAKLQHRNLVKLIGCCTQ-----RDER  575 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~--l~~l~H~nlv~l~g~~~~-----~~~~  575 (617)
                      .++|...++||+|+||.||++.. .++.||||++...   ..+.+..|.++  +..++||||+++++.+..     ....
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence            35677788999999999999976 6889999998643   23445555554  445899999999986653     2256


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCcCCHHH----------------HH---------hhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYTEHFFWSF----------------FF---------SFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~~~l~w~~----------------r~---------~i~~~~~~~~n  617 (617)
                      ++||||+++|+|.++|....    ++|..                ..         .|+|+||||+|
T Consensus        88 ~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~N  150 (336)
T 3g2f_A           88 LLVMEYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRN  150 (336)
T ss_dssp             EEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGG
T ss_pred             EEEEecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccce
Confidence            89999999999999997653    24432                22         89999999998

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.16  E-value=1.8e-11  Score=132.55  Aligned_cols=114  Identities=18%  Similarity=0.233  Sum_probs=89.6

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeC------C
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR------D  573 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~------~  573 (617)
                      .++|...++||+|+||.||++.... ++.||||++...  .....+.+.+|+.++..++|||||++++++...      .
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            4667888999999999999998765 889999999643  334457899999999999999999999999654      3


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCCC-----------CcCCHHHHHhhhhcccccCC
Q 007129          574 ERMLIYEYLPNKSLNDFIFGFLYT-----------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       574 ~~~lv~E~~~~GsL~~~L~~~~~~-----------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ..+|||||+++ +|.+.+...-..           ..|..-+...|+|+||||.|
T Consensus       141 ~~~lv~E~~~~-~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~N  194 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN  194 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             eEEEEEeCCCC-CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHh
Confidence            57999999975 577777542110           11344466689999999998

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.16  E-value=2.9e-11  Score=127.54  Aligned_cols=113  Identities=21%  Similarity=0.337  Sum_probs=84.2

Q ss_pred             HHhccCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeC------
Q 007129          500 ANATENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR------  572 (617)
Q Consensus       500 ~~at~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~------  572 (617)
                      ....++|...++||+|+||.||++... .++.||||++....    +...+|+.+++.++|||||++++++...      
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~   78 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK   78 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence            345677888899999999999999875 48999999986432    2234799999999999999999998543      


Q ss_pred             --------------------------------CeEEEEEeccCCCCHHHHHhcCC-CCCcCCH----------------H
Q 007129          573 --------------------------------DERMLIYEYLPNKSLNDFIFGFL-YTEHFFW----------------S  603 (617)
Q Consensus       573 --------------------------------~~~~lv~E~~~~GsL~~~L~~~~-~~~~l~w----------------~  603 (617)
                                                      ...++||||++ |+|.+.|.... ....+++                -
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L  157 (383)
T 3eb0_A           79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI  157 (383)
T ss_dssp             -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence                                            34789999998 68888776411 1122333                3


Q ss_pred             HHHhhhhcccccCC
Q 007129          604 FFFSFENLSLVDRN  617 (617)
Q Consensus       604 ~r~~i~~~~~~~~n  617 (617)
                      +...|+|+||||+|
T Consensus       158 H~~gi~H~Dikp~N  171 (383)
T 3eb0_A          158 HSLGICHRDIKPQN  171 (383)
T ss_dssp             HTTTEECSCCCGGG
T ss_pred             HHCcCccCccCHHH
Confidence            55678999999988

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.16  E-value=3e-11  Score=125.61  Aligned_cols=114  Identities=18%  Similarity=0.231  Sum_probs=91.5

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeC-----CeE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR-----DER  575 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~-----~~~  575 (617)
                      .++|...+.||+|+||.||++.... ++.||||.+.... ......+.+|+.++.+++||||+++++++...     ...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            3567788899999999999999864 8899999996433 34456789999999999999999999998764     678


Q ss_pred             EEEEeccCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++|+||++ |+|.+++......            ..|..-+...|+|+||||+|
T Consensus        90 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~N  142 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSN  142 (353)
T ss_dssp             EEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             EEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH
Confidence            99999997 6999998764211            11333466688999999998

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.15  E-value=4.1e-11  Score=124.69  Aligned_cols=113  Identities=20%  Similarity=0.374  Sum_probs=89.2

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEe--------C
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ--------R  572 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~--------~  572 (617)
                      ++|...++||+|+||.||++... .++.||||++....  ......+.+|+.++..++||||+++++++..        .
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            56777889999999999999985 48999999986432  2334678899999999999999999999987        3


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          573 DERMLIYEYLPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       573 ~~~~lv~E~~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +..++||||++ |+|.+.+......              ..|..-+...|+|+||||+|
T Consensus        97 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~N  154 (351)
T 3mi9_A           97 GSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAAN  154 (351)
T ss_dssp             CEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             ceEEEEEeccC-CCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHH
Confidence            46899999997 5888888764321              11333456689999999988

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.15  E-value=1.2e-11  Score=138.31  Aligned_cols=114  Identities=24%  Similarity=0.322  Sum_probs=92.3

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEe------CCeE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ------RDER  575 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~------~~~~  575 (617)
                      ++|...++||+|+||.||++.... ++.||||.+... .....+.|.+|+.++.+++||||+++++++..      ....
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            568888999999999999998754 889999998753 44556789999999999999999999998755      6677


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCcC----------------CHHHHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYTEHF----------------FWSFFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~~~l----------------~w~~r~~i~~~~~~~~n  617 (617)
                      ++||||+++|+|.+++........+                ..-+...|+|+||+|+|
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~N  151 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPEN  151 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTT
T ss_pred             EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHH
Confidence            9999999999999999875422223                33456688999999998

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.15  E-value=5.7e-11  Score=119.77  Aligned_cols=114  Identities=18%  Similarity=0.197  Sum_probs=86.2

Q ss_pred             ccCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCc-hhhH-HHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS-GQGM-EEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~-~~~~-~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      .++|...++||+|+||.||++... .++.||||+++... .... +.+..+...+..++||||+++++++...+..++|+
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            356777889999999999999985 48899999997532 2222 34455555678889999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCC-CCCcCCHH----------------HHH-hhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFL-YTEHFFWS----------------FFF-SFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~-~~~~l~w~----------------~r~-~i~~~~~~~~n  617 (617)
                      ||++ |+|.+++.... ....+++.                +.. .|+|+||||+|
T Consensus        86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~N  140 (290)
T 3fme_A           86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSN  140 (290)
T ss_dssp             ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGG
T ss_pred             ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHH
Confidence            9997 69988876411 12234443                444 89999999988

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.15  E-value=1.7e-11  Score=123.70  Aligned_cols=113  Identities=29%  Similarity=0.370  Sum_probs=82.9

Q ss_pred             cCCCCcceecccCceeEEEEEEcC--Cc--EEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE--GQ--EIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERM  576 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~--g~--~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~  576 (617)
                      ++|...+.||+|+||.||++....  ++  .||||.++..   .....++|.+|+.++.+++||||+++++++.... .+
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~   96 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK   96 (291)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred             hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence            567778899999999999998643  33  6899998643   2345678999999999999999999999987654 78


Q ss_pred             EEEeccCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|+||+++|+|.+++......              ..|.+-+...|+|+||+|+|
T Consensus        97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~N  151 (291)
T 1u46_A           97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARN  151 (291)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchhe
Confidence            999999999999999764211              01333356678999999988

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.14  E-value=4.9e-11  Score=125.31  Aligned_cols=114  Identities=18%  Similarity=0.220  Sum_probs=90.5

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCC------
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD------  573 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~------  573 (617)
                      .++|...+.||+|+||.||++.... ++.||||++...  .....+.+.+|+.++..++||||+++++++....      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            3567888899999999999998754 889999998643  3344578999999999999999999999997654      


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCCC-----------CcCCHHHHHhhhhcccccCC
Q 007129          574 ERMLIYEYLPNKSLNDFIFGFLYT-----------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       574 ~~~lv~E~~~~GsL~~~L~~~~~~-----------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ..++||||++ |+|.+++...-..           ..|..-+...|+|+||||+|
T Consensus       104 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~N  157 (371)
T 2xrw_A          104 DVYIVMELMD-ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN  157 (371)
T ss_dssp             EEEEEEECCS-EEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             ceEEEEEcCC-CCHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHH
Confidence            7899999997 5898888643110           11334456689999999998

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.14  E-value=2.4e-11  Score=127.27  Aligned_cols=112  Identities=16%  Similarity=0.186  Sum_probs=85.7

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC------CcEEEEeecccCchhh-----------HHHHHHHHHHHHccCCCcccce
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE------GQEIAAKRLSKSSGQG-----------MEEFENEVLLIAKLQHRNLVKL  565 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~------g~~vAvK~l~~~~~~~-----------~~~f~~Ev~~l~~l~H~nlv~l  565 (617)
                      .++|...++||+|+||.||++....      ++.||||.+.......           ...+..|+..+..++||||+++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~  113 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY  113 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence            4578888999999999999998865      3679999986543211           1234556667788899999999


Q ss_pred             EEEEEeC----CeEEEEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          566 IGCCTQR----DERMLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       566 ~g~~~~~----~~~~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++++...    ...+|||||+ +++|.+++....  ..++|.                +...|+|+||||+|
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~N  182 (364)
T 3op5_A          114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA--KRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASN  182 (364)
T ss_dssp             EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHH
Confidence            9998774    4579999999 999999997642  235554                45578999999998

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.14  E-value=6.6e-12  Score=132.24  Aligned_cols=114  Identities=11%  Similarity=0.180  Sum_probs=85.4

Q ss_pred             ccCCCCcceecccCceeEEEEEEc-CCcEEEEeeccc---CchhhHHHHHHHH---HHHHccCCCcccceE-------EE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSK---SSGQGMEEFENEV---LLIAKLQHRNLVKLI-------GC  568 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~---~~~~~~~~f~~Ev---~~l~~l~H~nlv~l~-------g~  568 (617)
                      .++|...+.||+|+||.||++... +++.||||++..   ......+.|.+|+   ..+++++|||||+++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            355777789999999999999975 489999999863   2334567899999   556666899999998       66


Q ss_pred             EEeCC-----------------eEEEEEeccCCCCHHHHHhcCCC----CCcCCHH----------------HHHhhhhc
Q 007129          569 CTQRD-----------------ERMLIYEYLPNKSLNDFIFGFLY----TEHFFWS----------------FFFSFENL  611 (617)
Q Consensus       569 ~~~~~-----------------~~~lv~E~~~~GsL~~~L~~~~~----~~~l~w~----------------~r~~i~~~  611 (617)
                      +...+                 ..+|||||+ +|+|.++|.....    ...++|.                +...|+|+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHr  230 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT  230 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence            65543                 278999999 6899999975311    1122233                34578999


Q ss_pred             ccccCC
Q 007129          612 SLVDRN  617 (617)
Q Consensus       612 ~~~~~n  617 (617)
                      ||||+|
T Consensus       231 Dikp~N  236 (377)
T 3byv_A          231 YLRPVD  236 (377)
T ss_dssp             CCCGGG
T ss_pred             CCCHHH
Confidence            999998

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.14  E-value=3.9e-11  Score=121.46  Aligned_cols=109  Identities=17%  Similarity=0.220  Sum_probs=91.0

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ++|...+.||+|+||.||++... .++.||||.+...  ...+++.+|+..+..+ +|+|++++++++......++|+||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~   87 (298)
T 1csn_A           10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   87 (298)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC--CccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence            56777889999999999999974 4889999998643  2335688999999999 899999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      + +++|.+++.....  .+++.                +...|+|+||||+|
T Consensus        88 ~-~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~N  136 (298)
T 1csn_A           88 L-GPSLEDLLDLCGR--KFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDN  136 (298)
T ss_dssp             C-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGG
T ss_pred             c-CCCHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHH
Confidence            9 9999999986432  24444                45578999999988

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.13  E-value=5.8e-11  Score=127.50  Aligned_cols=107  Identities=19%  Similarity=0.149  Sum_probs=85.7

Q ss_pred             CCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEEEeccCCC
Q 007129          507 SDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYEYLPNK  585 (617)
Q Consensus       507 ~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv~E~~~~G  585 (617)
                      ...+.||+|+||+||.....+|+.||||++..   ...+.+.+|+.++.++ +|||||++++++......+||+||++ |
T Consensus        18 ~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~---~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-g   93 (434)
T 2rio_A           18 VSEKILGYGSSGTVVFQGSFQGRPVAVKRMLI---DFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-L   93 (434)
T ss_dssp             EEEEEEEECSTTCEEEEEESSSSEEEEEEEEG---GGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred             eccCeEeeCCCeEEEEEEEECCeEEEEEEEcH---HHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-C
Confidence            34578999999999776666799999999864   2345688999999886 89999999999999999999999995 7


Q ss_pred             CHHHHHhcCCCC-C-------------------cCCHHHHHhhhhcccccCC
Q 007129          586 SLNDFIFGFLYT-E-------------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       586 sL~~~L~~~~~~-~-------------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|.++|...... .                   .|..-+...|+|+||||+|
T Consensus        94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~N  145 (434)
T 2rio_A           94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQN  145 (434)
T ss_dssp             EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHh
Confidence            999999865321 1                   1234467789999999998

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.13  E-value=1.5e-10  Score=124.18  Aligned_cols=111  Identities=19%  Similarity=0.256  Sum_probs=90.4

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHcc------CCCcccceEEEEEeCCeEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKL------QHRNLVKLIGCCTQRDERM  576 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l------~H~nlv~l~g~~~~~~~~~  576 (617)
                      ..|...++||+|+||.||++.... ++.||||+++.. ....+++.+|+.++..+      .|+||+++++++......+
T Consensus        97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  175 (429)
T 3kvw_A           97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC  175 (429)
T ss_dssp             TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred             CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence            457778899999999999998865 889999999643 33456788888888776      5779999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +|+||+. ++|.+++..... ..+++.                +...|+|+||||+|
T Consensus       176 lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~N  230 (429)
T 3kvw_A          176 MTFELLS-MNLYELIKKNKF-QGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPEN  230 (429)
T ss_dssp             EEECCCC-CBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGG
T ss_pred             EEEeccC-CCHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH
Confidence            9999996 799999986542 224443                55678999999998

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.12  E-value=9.3e-12  Score=127.51  Aligned_cols=113  Identities=19%  Similarity=0.316  Sum_probs=92.6

Q ss_pred             HhccCCCCcceecccCceeEEEEEEcCCcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          501 NATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       501 ~at~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      ...++|...+.||+|+||.||++....  .+|+|.++..  .....+.|.+|+.++.+++||||+++++++...+..++|
T Consensus        30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv  107 (319)
T 2y4i_B           30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII  107 (319)
T ss_dssp             SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred             CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence            345678888999999999999998743  4899998643  223346788999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCCCCcCC----------------HHHHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYTEHFF----------------WSFFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~~~l~----------------w~~r~~i~~~~~~~~n  617 (617)
                      +||+++++|.+++.....  .++                .-+...|+|+||+|+|
T Consensus       108 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~N  160 (319)
T 2y4i_B          108 TSLCKGRTLYSVVRDAKI--VLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKN  160 (319)
T ss_dssp             CBCCCSEEHHHHTTSSCC--CCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTT
T ss_pred             eecccCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhh
Confidence            999999999999976431  233                3355678999999998

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.12  E-value=5.3e-11  Score=124.61  Aligned_cols=114  Identities=12%  Similarity=0.189  Sum_probs=90.7

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeC-----CeE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR-----DER  575 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~-----~~~  575 (617)
                      .+.|...+.||+|+||.||++.... ++.||||++.... ....+.+.+|+.++.+++||||+++++++...     ...
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            3567888999999999999998764 7889999997433 33447899999999999999999999998764     368


Q ss_pred             EEEEeccCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++|+||++ |+|.+++......            ..|..-+...|+|+||||+|
T Consensus       106 ~iv~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~N  158 (364)
T 3qyz_A          106 YIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN  158 (364)
T ss_dssp             EEEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             EEEEcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHh
Confidence            99999997 6999999764311            01333356678999999998

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.11  E-value=8e-11  Score=126.27  Aligned_cols=111  Identities=17%  Similarity=0.275  Sum_probs=88.7

Q ss_pred             ccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEEEec
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ...|...+.||+|+||.|+.....+++.||||++....   .+.+.+|+.++.++ +|||||++++++......+||+||
T Consensus        23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~   99 (432)
T 3p23_A           23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL   99 (432)
T ss_dssp             TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence            34577778999999999665555578999999986432   23467899999999 799999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCC--------------cCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTE--------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~--------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++ |+|.+++.......              .|..-+...|+|+||||+|
T Consensus       100 ~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~N  148 (432)
T 3p23_A          100 CA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHN  148 (432)
T ss_dssp             CS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTS
T ss_pred             CC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHH
Confidence            96 69999998654211              1344467789999999998

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.11  E-value=1.6e-10  Score=118.86  Aligned_cols=113  Identities=17%  Similarity=0.235  Sum_probs=86.5

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCc-hhhHHHHHHHHH-HHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS-GQGMEEFENEVL-LIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~-~~~~~~f~~Ev~-~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ++|...+.||+|+||.||++... +++.||||.+.... .....++..|+. ++..++||||+++++++...+..++|+|
T Consensus        22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e  101 (327)
T 3aln_A           22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME  101 (327)
T ss_dssp             CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence            56777789999999999999986 48899999997542 334456666766 6777899999999999999999999999


Q ss_pred             ccCCCCHHHHHhcC--CCCCcCCHH----------------HHH-hhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGF--LYTEHFFWS----------------FFF-SFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~--~~~~~l~w~----------------~r~-~i~~~~~~~~n  617 (617)
                      |++ |+|.+++...  .....+++.                +.. .|+|+||+|+|
T Consensus       102 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~N  156 (327)
T 3aln_A          102 LMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSN  156 (327)
T ss_dssp             CCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGG
T ss_pred             ecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHH
Confidence            997 4888877631  012234433                233 89999999988

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.11  E-value=6.5e-11  Score=123.41  Aligned_cols=119  Identities=18%  Similarity=0.178  Sum_probs=79.0

Q ss_pred             HHHHHhccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCe-
Q 007129          497 MAIANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDE-  574 (617)
Q Consensus       497 ~~l~~at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~-  574 (617)
                      .......++|...++||+|+||.||++.... ++.||||++... ....+.+.+|+..+..++||||+++++++..... 
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~   94 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER   94 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECC-TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC-ccccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence            3455667889999999999999999999864 889999988543 2333467788888899999999999999976443 


Q ss_pred             ------EEEEEeccCCCCHHHHHhcC-CCCCcCCH----------------HH--HHhhhhcccccCC
Q 007129          575 ------RMLIYEYLPNKSLNDFIFGF-LYTEHFFW----------------SF--FFSFENLSLVDRN  617 (617)
Q Consensus       575 ------~~lv~E~~~~GsL~~~L~~~-~~~~~l~w----------------~~--r~~i~~~~~~~~n  617 (617)
                            .++||||+++ +|...+... .....+++                .+  ...|+|+||||+|
T Consensus        95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~N  161 (360)
T 3e3p_A           95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHN  161 (360)
T ss_dssp             CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGG
T ss_pred             cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHH
Confidence                  7899999975 555544421 11122222                23  6679999999998

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.11  E-value=8.7e-11  Score=120.61  Aligned_cols=114  Identities=22%  Similarity=0.329  Sum_probs=87.9

Q ss_pred             hccCCCCcceecccCceeEEEEEEc--CCcEEEEeecccCc--hhhHHHHHHHHHHHHcc---CCCcccceEEEEE----
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLI--EGQEIAAKRLSKSS--GQGMEEFENEVLLIAKL---QHRNLVKLIGCCT----  570 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~--~g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l---~H~nlv~l~g~~~----  570 (617)
                      +.++|...+.||+|+||.||++...  +++.||+|.++...  ......+.+|+.++..+   +||||+++++++.    
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            4567888899999999999999984  47899999986432  22234567777777665   8999999999987    


Q ss_pred             -eCCeEEEEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          571 -QRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       571 -~~~~~~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                       .....++|+||++ |+|.+++..... ..+++.                +...|+|+||+|+|
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~N  150 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQN  150 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHHSCT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             CCCceEEEEEecCC-CCHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHH
Confidence             4567899999997 799999976532 224443                55578999999988

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.11  E-value=3.1e-11  Score=125.76  Aligned_cols=107  Identities=15%  Similarity=0.092  Sum_probs=87.0

Q ss_pred             cCCCCcceecccCceeEEEEEEcC---------CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccc----------
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE---------GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVK----------  564 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~---------g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~----------  564 (617)
                      ++|...+.||+|+||.||++....         ++.||||.+...     +.+.+|+.++.+++|||+++          
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  116 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL  116 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence            567788999999999999999864         778999998643     46889999999999999987          


Q ss_pred             -----eEEEEEe-CCeEEEEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          565 -----LIGCCTQ-RDERMLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       565 -----l~g~~~~-~~~~~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                           +++++.. ....++||||+ +++|.++|.... ...+++.                +...|+|+||||+|
T Consensus       117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~N  189 (352)
T 2jii_A          117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAEN  189 (352)
T ss_dssp             CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGG
T ss_pred             cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHH
Confidence                 6788876 77889999999 999999998642 2235554                45578999999988

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.11  E-value=7.3e-11  Score=120.66  Aligned_cols=113  Identities=19%  Similarity=0.197  Sum_probs=94.2

Q ss_pred             HhccCCCCcceecccCceeEEEEEEcCCcEEEEeecccC--chhhHHHHHHHHHHHHccC--CCcccceEEEEEeCCeEE
Q 007129          501 NATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQ--HRNLVKLIGCCTQRDERM  576 (617)
Q Consensus       501 ~at~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~--H~nlv~l~g~~~~~~~~~  576 (617)
                      ...+.|...+.||+|+||.||++...+++.||||.+...  .....+.|.+|+.++.+++  |+||+++++++......+
T Consensus        25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~  104 (313)
T 3cek_A           25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY  104 (313)
T ss_dssp             ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE
T ss_pred             eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE
Confidence            344668888999999999999999888999999998643  3445678999999999997  599999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCcCCH----------------HHHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      +|+| +.+++|.+++....   .+++                -+...|+|+||+|+|
T Consensus       105 lv~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~N  157 (313)
T 3cek_A          105 MVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN  157 (313)
T ss_dssp             EEEC-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             EEEe-cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCccc
Confidence            9999 66899999998643   2343                355678999999988

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.11  E-value=2.5e-10  Score=97.79  Aligned_cols=94  Identities=19%  Similarity=0.236  Sum_probs=69.3

Q ss_pred             CCCCCCCceEEEeecCCceEEEecCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCc-ceEeecCCCcccccC
Q 007129           75 APLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDN-FLWQSFDYPSHILIA  153 (617)
Q Consensus        75 ~pv~~~~~~l~l~~~G~~~L~l~d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~-~lWqSFd~PtDTlLp  153 (617)
                      .++......|.+..|||  |||.+.++  +|++++........++|+|+|||||++.+    +. ++|||..+       
T Consensus        15 ~~L~~g~~~L~~q~dGn--Lvl~~~~~--vW~snt~~~~~~~~l~l~~dGNLVl~~~~----~~~~vW~S~t~-------   79 (111)
T 3mez_A           15 NQLSYESAAFVMQGDCN--LVLYNEAG--GFQSNTHGRGVDCTLRLNNRGQLEIHSAN----SNTPVWVYPRS-------   79 (111)
T ss_dssp             CEEEETTEEEEECTTSC--EEEECSSC--CEECCCTTSCSSCEEEECTTSCEEEECSS----CSSCSEEESSS-------
T ss_pred             CEEecCCEEEEEccCCe--EEEECCCC--EEECCcccCCcCEEEEEcCCCcEEEEeCC----CCEEEEEeccc-------
Confidence            33443457899999999  99999877  99999863333468999999999999863    33 59998621       


Q ss_pred             CceeeeeeecCceeEEEEcccCCCCCCeeeEEEeCCCCCcEEEEEcCCeeeEeeCC
Q 007129          154 GMKLGVNLVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGS  209 (617)
Q Consensus       154 gq~L~~~~~tg~~~~l~Sw~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~~~g~  209 (617)
                                            .....|.|.+.++++|...++  .  .++|.+++
T Consensus        80 ----------------------~~~~~~~~~l~Lq~dGNlvly--~--~~~W~s~t  109 (111)
T 3mez_A           80 ----------------------VNTVRGNYAATLGPDQHVTIY--G--PAIWSTPA  109 (111)
T ss_dssp             ----------------------CCCCSSCCEEEECTTSCEEEE--C--SEEEECCC
T ss_pred             ----------------------cCCCCcCEEEEECCCCeEEEe--c--cCEEccCC
Confidence                                  011346789999999976654  3  57888764

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.10  E-value=3.7e-11  Score=126.12  Aligned_cols=114  Identities=20%  Similarity=0.314  Sum_probs=82.3

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeC------C
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR------D  573 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~------~  573 (617)
                      .+.|...+.||+|+||.||++.... ++.||||++...  .....+.+.+|+.++..++||||+++++++...      .
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            3678888999999999999998754 889999998643  334457889999999999999999999998754      5


Q ss_pred             eEEEEEeccCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          574 ERMLIYEYLPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       574 ~~~lv~E~~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ..++|+||+ +++|.+++......            ..|..-+...|+|+||||+|
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~N  162 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN  162 (367)
T ss_dssp             CCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             eEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhh
Confidence            679999999 78999988653211            01223355678999999998

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.10  E-value=5.2e-11  Score=123.75  Aligned_cols=110  Identities=17%  Similarity=0.185  Sum_probs=82.9

Q ss_pred             cCCCCcceecccCceeEEEEEEc----CCcEEEEeecccCchh-----------hHHHHHHHHHHHHccCCCcccceEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI----EGQEIAAKRLSKSSGQ-----------GMEEFENEVLLIAKLQHRNLVKLIGC  568 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~----~g~~vAvK~l~~~~~~-----------~~~~f~~Ev~~l~~l~H~nlv~l~g~  568 (617)
                      ++|...++||+|+||.||++...    .+..+|||.+......           ..+.+.+|+..+..++||||++++++
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~  116 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS  116 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence            56777889999999999999986    4678999998654221           12347788899999999999999999


Q ss_pred             EEe----CCeEEEEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          569 CTQ----RDERMLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       569 ~~~----~~~~~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +..    ....++||||+ +++|.+++....   .+++.                +...|+|+||||+|
T Consensus       117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N  181 (345)
T 2v62_A          117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAAN  181 (345)
T ss_dssp             EEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             cccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHH
Confidence            988    77889999999 999999997643   34444                55678999999998

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.10  E-value=3.4e-11  Score=122.96  Aligned_cols=117  Identities=22%  Similarity=0.298  Sum_probs=84.5

Q ss_pred             HhccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch------hhHHHHHHHHHHHHcc----CCCcccceEEEE
Q 007129          501 NATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG------QGMEEFENEVLLIAKL----QHRNLVKLIGCC  569 (617)
Q Consensus       501 ~at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~------~~~~~f~~Ev~~l~~l----~H~nlv~l~g~~  569 (617)
                      .-.++|...+.||+|+||.||++.... ++.||||.+.....      .....+.+|+.++.++    +|+||+++++++
T Consensus        28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~  107 (312)
T 2iwi_A           28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF  107 (312)
T ss_dssp             -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred             hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence            345678888999999999999998754 88999999964322      1223467789888888    899999999999


Q ss_pred             EeCCeEEEEEec-cCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          570 TQRDERMLIYEY-LPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       570 ~~~~~~~lv~E~-~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ...+..++|+|| +++++|.+++.....-             ..|..-+...|+|+||+|+|
T Consensus       108 ~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N  169 (312)
T 2iwi_A          108 ETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDEN  169 (312)
T ss_dssp             -----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGG
T ss_pred             ecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhh
Confidence            998999999999 8999999999764310             01333456678999999987

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.09  E-value=6.7e-11  Score=124.22  Aligned_cols=114  Identities=19%  Similarity=0.313  Sum_probs=90.2

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeE----
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDER----  575 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~----  575 (617)
                      .+.|...+.||+|+||.||++.... ++.||||++...  .....+.+.+|+.++..++||||+++++++......    
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            3567778899999999999998764 889999999753  233457899999999999999999999999876654    


Q ss_pred             --EEEEeccCCCCHHHHHhcCCCC-----------CcCCHHHHHhhhhcccccCC
Q 007129          576 --MLIYEYLPNKSLNDFIFGFLYT-----------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       576 --~lv~E~~~~GsL~~~L~~~~~~-----------~~l~w~~r~~i~~~~~~~~n  617 (617)
                        ++|+||++ ++|.+++...-..           ..|..-+...|+|+||||+|
T Consensus       121 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~N  174 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN  174 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             eEEEEEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHH
Confidence              99999997 7898887432100           11333455689999999998

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.09  E-value=1.7e-10  Score=118.72  Aligned_cols=111  Identities=21%  Similarity=0.288  Sum_probs=90.6

Q ss_pred             cCCCCcceecccCceeEEEEEE-c-CCcEEEEeecccCchhhHHHHHHHHHHHHccCCC------cccceEEEEEeCCeE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVL-I-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHR------NLVKLIGCCTQRDER  575 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l-~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~------nlv~l~g~~~~~~~~  575 (617)
                      +.|...++||+|+||.||++.. . .++.||||.++.. ....+.+.+|+.++..++|+      +++++++++...+..
T Consensus        14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~   92 (339)
T 1z57_A           14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI   92 (339)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred             CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence            4677788999999999999987 3 4789999999643 34457889999999888665      499999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCcCCH----------------HHHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      ++||||+ +++|.+++..... ..+++                -+...|+|+||||+|
T Consensus        93 ~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~N  148 (339)
T 1z57_A           93 CIVFELL-GLSTYDFIKENGF-LPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPEN  148 (339)
T ss_dssp             EEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             EEEEcCC-CCCHHHHHHhcCC-CCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHH
Confidence            9999999 8999999986542 22333                356688999999998

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.08  E-value=1.3e-10  Score=122.65  Aligned_cols=111  Identities=17%  Similarity=0.193  Sum_probs=87.9

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccC--------CCcccceEEEEE----
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQ--------HRNLVKLIGCCT----  570 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~--------H~nlv~l~g~~~----  570 (617)
                      ++|...++||+|+||.||++.... ++.||||.++.. ....+.+.+|+.++..++        |+||+++++++.    
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~  115 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV  115 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred             CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence            568888999999999999998754 889999999643 344578899999999885        788999999987    


Q ss_pred             eCCeEEEEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHH-hhhhcccccCC
Q 007129          571 QRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFF-SFENLSLVDRN  617 (617)
Q Consensus       571 ~~~~~~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~-~i~~~~~~~~n  617 (617)
                      .....+|||||+ +++|.+++.... ...+++.                +.. .|+|+||||+|
T Consensus       116 ~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~N  177 (397)
T 1wak_A          116 NGTHICMVFEVL-GHHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPEN  177 (397)
T ss_dssp             TEEEEEEEECCC-CCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGG
T ss_pred             CCceEEEEEecc-CccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHH
Confidence            456789999999 667777776543 1224433                454 89999999998

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.06  E-value=2.8e-10  Score=117.82  Aligned_cols=110  Identities=18%  Similarity=0.126  Sum_probs=82.0

Q ss_pred             ccCCCCc-ceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEe----CCeEE
Q 007129          503 TENFSDK-NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ----RDERM  576 (617)
Q Consensus       503 t~~f~~~-~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~----~~~~~  576 (617)
                      .++|... +.||+|+||.||++.... ++.||||.+... ....++   ....+..++|||++++++++..    ....+
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~e---~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~  102 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-PKARQE---VDHHWQASGGPHIVCILDVYENMHHGKRCLL  102 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-HHHHHH---HHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-HHHHHH---HHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence            3556664 469999999999999874 899999998642 222222   2234566799999999999876    44578


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +||||+++|+|.+++.... ...+++.                +...|+|+||||+|
T Consensus       103 lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~N  158 (336)
T 3fhr_A          103 IIMECMEGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN  158 (336)
T ss_dssp             EEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             EEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence            9999999999999998653 2234444                45578999999988

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.06  E-value=2.4e-10  Score=121.52  Aligned_cols=106  Identities=20%  Similarity=0.211  Sum_probs=77.8

Q ss_pred             cceecccCceeEEEEEEc---CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEe--CCeEEEEEeccC
Q 007129          509 KNKLGEGGFGPVYKGVLI---EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ--RDERMLIYEYLP  583 (617)
Q Consensus       509 ~~~lG~G~fG~Vykg~l~---~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~--~~~~~lv~E~~~  583 (617)
                      .++||+|+||.||++...   .++.||||.+...  ...+.+.+|+.++.+++||||+++++++..  ....+||+||++
T Consensus        26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~  103 (405)
T 3rgf_A           26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE  103 (405)
T ss_dssp             SCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred             CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence            458999999999999976   3678999999643  223578899999999999999999999965  678899999996


Q ss_pred             CCCHHHHHhcCC------CCCcCCH----------------HHHHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFL------YTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~------~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                       |+|.+++....      ....+++                -+...|+|+||||+|
T Consensus       104 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~N  158 (405)
T 3rgf_A          104 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPAN  158 (405)
T ss_dssp             -EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             -CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHH
Confidence             58888876321      1112333                355678999999998

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.06  E-value=7.8e-11  Score=122.71  Aligned_cols=113  Identities=19%  Similarity=0.311  Sum_probs=88.6

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCe------
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDE------  574 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~------  574 (617)
                      ++|...+.||+|+||.||++.... |+.||||.+...  .....+.+.+|+.++.+++||||+++++++.....      
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  103 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  103 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence            567777899999999999999864 889999998643  23345789999999999999999999999987654      


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCC-----------CcCCHHHHHhhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLYT-----------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~~-----------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      .++|+||++ |+|.+++...-..           ..|..-+...|+|+||+|+|
T Consensus       104 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~N  156 (353)
T 3coi_A          104 FYLVMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN  156 (353)
T ss_dssp             CEEEEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGG
T ss_pred             EEEEecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH
Confidence            499999997 6888877432100           11334456678999999988

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.05  E-value=7.6e-11  Score=129.97  Aligned_cols=109  Identities=14%  Similarity=0.064  Sum_probs=80.4

Q ss_pred             CcceecccCceeEEEEEEcCCcEEEEeecccCc--------hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          508 DKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSS--------GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       508 ~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~--------~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ..++||+|+||.||++.. .++.+++|+.....        ....+.|.+|+.++.+++||||+++..++...++.+|||
T Consensus       340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm  418 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM  418 (540)
T ss_dssp             --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred             CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence            356899999999999954 57888888764321        111356899999999999999997777777888889999


Q ss_pred             eccCCCCHHHHHhcCCC-----CCcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLY-----TEHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~-----~~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.++|.....     -..|..-+...|+|+||||+|
T Consensus       419 E~~~ggsL~~~l~~~~~i~~qi~~aL~~LH~~gIiHrDiKp~N  461 (540)
T 3en9_A          419 SYINGKLAKDVIEDNLDIAYKIGEIVGKLHKNDVIHNDLTTSN  461 (540)
T ss_dssp             ECCCSEEHHHHSTTCTHHHHHHHHHHHHHHHTTEECTTCCTTS
T ss_pred             ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCcCccCCCCHHH
Confidence            99999999999976110     123666788899999999998

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.05  E-value=1.2e-10  Score=123.31  Aligned_cols=110  Identities=18%  Similarity=0.312  Sum_probs=81.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCe------EEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDE------RML  577 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~------~~l  577 (617)
                      ..|...++||+|+||.||++....+..+|+|++.....    ...+|+.++..++||||+++++++.....      .++
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l  115 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL  115 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence            35777889999999999999997777799998854322    22369999999999999999999866443      789


Q ss_pred             EEeccCCCCHHHHHhcCCCCCc----------------CCHHHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTEH----------------FFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~~----------------l~w~~r~~i~~~~~~~~n  617 (617)
                      ||||++++.+............                |..-+...|+|+||||+|
T Consensus       116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~N  171 (394)
T 4e7w_A          116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQN  171 (394)
T ss_dssp             EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHH
Confidence            9999986544333321111112                334466789999999998

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.04  E-value=1.4e-10  Score=123.97  Aligned_cols=108  Identities=22%  Similarity=0.380  Sum_probs=81.2

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeC----C--eEEE
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR----D--ERML  577 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~----~--~~~l  577 (617)
                      .|...++||+|+||.||++.... ++.||||++....    +.+.+|+.++.+++|||||++++++...    .  ..++
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l  130 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL  130 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred             eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence            46667899999999999999865 8999999986432    2234799999999999999999988642    2  3579


Q ss_pred             EEeccCCCCHHHHHhcC-CCCCcCCH----------------HHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGF-LYTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~-~~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      |+||+++ +|.+.+... .....+++                -+...|+|+||||+|
T Consensus       131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~N  186 (420)
T 1j1b_A          131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQN  186 (420)
T ss_dssp             EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGG
T ss_pred             ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhh
Confidence            9999975 666665421 11122333                355679999999998

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.02  E-value=4.7e-10  Score=118.21  Aligned_cols=113  Identities=20%  Similarity=0.248  Sum_probs=90.7

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccC-CC-----cccceEEEEEeCCe
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQ-HR-----NLVKLIGCCTQRDE  574 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~-H~-----nlv~l~g~~~~~~~  574 (617)
                      ..++|...++||+|+||.||++.... ++.||||+++.. ....+++..|+.++..++ |+     +++++.+++...+.
T Consensus        52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  130 (382)
T 2vx3_A           52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH  130 (382)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred             eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence            35678888999999999999998864 788999999643 344567888988888874 55     49999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCCCcCCHHH------------------HHhhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLYTEHFFWSF------------------FFSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~~~~l~w~~------------------r~~i~~~~~~~~n  617 (617)
                      .+|||||++ |+|.++|..... ..+++..                  +..|+|+||||+|
T Consensus       131 ~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~N  189 (382)
T 2vx3_A          131 LCLVFEMLS-YNLYDLLRNTNF-RGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPEN  189 (382)
T ss_dssp             EEEEEECCC-CBHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGG
T ss_pred             eEEEEecCC-CCHHHHHhhcCc-CCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCccc
Confidence            999999996 699999987542 2355543                  3458999999998

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.02  E-value=3.5e-10  Score=114.25  Aligned_cols=110  Identities=23%  Similarity=0.302  Sum_probs=87.4

Q ss_pred             ccCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEE-EeCCeEEEEEe
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC-TQRDERMLIYE  580 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~-~~~~~~~lv~E  580 (617)
                      .++|...+.||+|+||.||++... .++.||||.+....  ..+++.+|+.++..++|++++..+..+ .+....++|+|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            356888899999999999999974 58999999986432  235689999999999988877666655 56778899999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |+ +++|.+++.....  .+++.                +...|+|+||||+|
T Consensus        86 ~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~N  135 (296)
T 3uzp_A           86 LL-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDN  135 (296)
T ss_dssp             CC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             ec-CCCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHH
Confidence            99 9999999974321  24443                55678999999998

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.02  E-value=2.1e-10  Score=115.84  Aligned_cols=110  Identities=23%  Similarity=0.298  Sum_probs=84.6

Q ss_pred             ccCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEE-EeCCeEEEEEe
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC-TQRDERMLIYE  580 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~-~~~~~~~lv~E  580 (617)
                      .++|...+.||+|+||.||++... .++.||||.+...  ...+++.+|+.++..++|++++..++.+ ......++|+|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK--TKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccc--ccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence            467888899999999999999974 4889999986532  2234688999999999988877776665 56778899999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |+ +++|.+++.....  .+++.                +...|+|+||||+|
T Consensus        86 ~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~N  135 (296)
T 4hgt_A           86 LL-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDN  135 (296)
T ss_dssp             CC-CCBHHHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             cc-CCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH
Confidence            99 9999999974322  24444                55578899999998

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.01  E-value=3e-10  Score=119.20  Aligned_cols=113  Identities=10%  Similarity=0.025  Sum_probs=74.3

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCc---hhhHHHHHHHHHHHHcc--CCCcccceE-------EEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS---GQGMEEFENEVLLIAKL--QHRNLVKLI-------GCCT  570 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l--~H~nlv~l~-------g~~~  570 (617)
                      .+|...++||+|+||.||++... +++.||||++....   ....+.+.+|+.++..+  +|||+++++       +++.
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence            34677789999999999999976 48899999997543   23446788885544444  699987754       4444


Q ss_pred             eC-----------------CeEEEEEeccCCCCHHHHHhcCCCCC--------------------cCCHHHHHhhhhccc
Q 007129          571 QR-----------------DERMLIYEYLPNKSLNDFIFGFLYTE--------------------HFFWSFFFSFENLSL  613 (617)
Q Consensus       571 ~~-----------------~~~~lv~E~~~~GsL~~~L~~~~~~~--------------------~l~w~~r~~i~~~~~  613 (617)
                      ..                 ...+|||||++ |+|.++|.......                    .|..-+...|+|+||
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDi  220 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHF  220 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcC
Confidence            33                 33799999999 99999998531110                    022234567899999


Q ss_pred             ccCC
Q 007129          614 VDRN  617 (617)
Q Consensus       614 ~~~n  617 (617)
                      ||+|
T Consensus       221 kp~N  224 (371)
T 3q60_A          221 TPDN  224 (371)
T ss_dssp             SGGG
T ss_pred             CHHH
Confidence            9998

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.00  E-value=1.8e-10  Score=116.19  Aligned_cols=115  Identities=15%  Similarity=0.054  Sum_probs=84.8

Q ss_pred             HHHHhccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCch------------------hhHHHHHHHHHHHHccCC
Q 007129          498 AIANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSG------------------QGMEEFENEVLLIAKLQH  559 (617)
Q Consensus       498 ~l~~at~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~------------------~~~~~f~~Ev~~l~~l~H  559 (617)
                      .+......|...+.||+|+||.||++...+|+.||+|.++....                  .....|.+|+.++.+++|
T Consensus        84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~  163 (282)
T 1zar_A           84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG  163 (282)
T ss_dssp             HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC
Confidence            34444455666789999999999999996689999999864221                  134679999999999994


Q ss_pred             CcccceEEEEEeCCeEEEEEeccCCCCHHHHHhcCCCC-------CcCCHHHHHhhhhcccccCC
Q 007129          560 RNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYT-------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       560 ~nlv~l~g~~~~~~~~~lv~E~~~~GsL~~~L~~~~~~-------~~l~w~~r~~i~~~~~~~~n  617 (617)
                         +++.+++.. +..++||||+++|+|.+ +......       ..|...++..|+|+||||+|
T Consensus       164 ---~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~N  223 (282)
T 1zar_A          164 ---LAVPKVYAW-EGNAVLMELIDAKELYR-VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYN  223 (282)
T ss_dssp             ---SSSCCEEEE-ETTEEEEECCCCEEGGG-CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTS
T ss_pred             ---CCcCeEEec-cceEEEEEecCCCcHHH-cchhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHH
Confidence               555554433 55699999999999998 5322110       12555688899999999998

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=98.99  E-value=1.7e-09  Score=92.38  Aligned_cols=87  Identities=22%  Similarity=0.332  Sum_probs=65.0

Q ss_pred             CceEEEeecCCceEEEecCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecCCCcccccCCceeeee
Q 007129           81 SGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVN  160 (617)
Q Consensus        81 ~~~l~l~~~G~~~L~l~d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~PtDTlLpgq~L~~~  160 (617)
                      ..+|.+..|||  |+|.+. +.++|++++........++|+|+|||||+|.+    +.++|||....             
T Consensus        20 ~~~L~~q~dGn--Lvly~~-~~~vW~snt~~~~~~~~l~l~~dGNLvl~~~~----~~~~W~S~t~~-------------   79 (109)
T 3dzw_A           20 RYVFIMQEDCN--LVLYDV-DKPIWATNTGGLDRRCHLSMQSDGNLVVYSPR----NNPIWASNTGG-------------   79 (109)
T ss_dssp             TEEEEECTTSC--EEEEET-TEEEEECCCTTSSSSCEEEECTTSCEEEECTT----SCEEEECCCCC-------------
T ss_pred             CEEEEEcCCCc--EEEEeC-CEEEEECCcccCCCCEEEEEeCCCCEEEECCC----CCEEEECCCCC-------------
Confidence            46799999999  999988 68999999863333568999999999999863    57899985321             


Q ss_pred             eecCceeEEEEcccCCCCCCeeeEEEeCCCCCcEEEEEcCCeeeEeeCC
Q 007129          161 LVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGS  209 (617)
Q Consensus       161 ~~tg~~~~l~Sw~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~~~g~  209 (617)
                                        ..+.|.+.++++|...++  +.  +.|.++.
T Consensus        80 ------------------~~~~~~~~L~ddGNlvly--~~--~~W~s~t  106 (109)
T 3dzw_A           80 ------------------ENGNYVCVLQKDRNVVIY--GT--ARWATGT  106 (109)
T ss_dssp             ------------------SSSCEEEEECTTSCEEEE--ES--CCCCCCC
T ss_pred             ------------------CCCCEEEEEeCCCEEEEE--CC--CEEeCCC
Confidence                              124578899999976554  22  5666653

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.99  E-value=3.8e-10  Score=118.08  Aligned_cols=111  Identities=17%  Similarity=0.240  Sum_probs=89.1

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccC-----------CCcccceEEEEEe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQ-----------HRNLVKLIGCCTQ  571 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~-----------H~nlv~l~g~~~~  571 (617)
                      ++|...++||+|+||.||++... .++.||||.+... ....+.+.+|+.++.+++           |+||+++++++..
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~   97 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   97 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence            56777889999999999999975 4889999999643 344567889999988876           8999999999876


Q ss_pred             CC----eEEEEEeccCCCCHHHHHhcCCCCCcCCH----------------HHHH-hhhhcccccCC
Q 007129          572 RD----ERMLIYEYLPNKSLNDFIFGFLYTEHFFW----------------SFFF-SFENLSLVDRN  617 (617)
Q Consensus       572 ~~----~~~lv~E~~~~GsL~~~L~~~~~~~~l~w----------------~~r~-~i~~~~~~~~n  617 (617)
                      ..    ..++|+||+ +++|.+++..... ..+++                -+.. .|+|+||||+|
T Consensus        98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~N  162 (373)
T 1q8y_A           98 KGPNGVHVVMVFEVL-GENLLALIKKYEH-RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPEN  162 (373)
T ss_dssp             EETTEEEEEEEECCC-CEEHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGG
T ss_pred             cCCCCceEEEEEecC-CCCHHHHHHHhhc-cCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHH
Confidence            54    689999999 8999999976432 22333                3444 89999999998

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=98.99  E-value=4.9e-10  Score=114.41  Aligned_cols=111  Identities=13%  Similarity=0.163  Sum_probs=77.0

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCc-hhhH-HHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS-GQGM-EEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~-~~~~-~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ++|...+.||+|+||.||++... +++.||||.+.... .... +.+..+..++..++||||+++++++...+..++|||
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e  104 (318)
T 2dyl_A           25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME  104 (318)
T ss_dssp             GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence            56777789999999999999986 48899999997532 2222 344555567888899999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCCHH----------------HH-HhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFFWS----------------FF-FSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~w~----------------~r-~~i~~~~~~~~n  617 (617)
                      |+ ++.+..++....  ..+++.                +. ..|+|+||+|+|
T Consensus       105 ~~-~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~N  155 (318)
T 2dyl_A          105 LM-GTCAEKLKKRMQ--GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSN  155 (318)
T ss_dssp             CC-SEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGG
T ss_pred             cc-CCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHH
Confidence            99 445554443211  123333                34 479999999988

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=98.99  E-value=1.3e-09  Score=93.18  Aligned_cols=85  Identities=22%  Similarity=0.341  Sum_probs=63.9

Q ss_pred             CceEEEeecCCceEEEecCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecCCCcccccCCceeeee
Q 007129           81 SGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVN  160 (617)
Q Consensus        81 ~~~l~l~~~G~~~L~l~d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~PtDTlLpgq~L~~~  160 (617)
                      ..+|.+..|||  |+|++.  .++|++++........++|+|+|||||+|.+    +.++|||-.+-             
T Consensus        25 ~~~L~~q~dGn--Lvl~~~--~~vW~snt~~~~~~~~l~l~~dGNLvl~d~~----~~~iW~S~t~~-------------   83 (110)
T 3r0e_B           25 NHQLVMQGDCN--LVLYGG--KYGWQSNTHGNGEHCFLRLNHKGELIIKDDD----FKTIWSSRSSS-------------   83 (110)
T ss_dssp             SCEEEECTTSC--EEEECS--SSCEECCCTTSSSSCEEEECTTSCEEEECTT----CCEEEECCCCC-------------
T ss_pred             CEEEEEcCCCe--EEEECC--eEEEECCCcCCCcCEEEEEeCCCcEEEEeCC----CCEEEEcCCcC-------------
Confidence            46899999999  999887  5899999864333468999999999999863    67899984311             


Q ss_pred             eecCceeEEEEcccCCCCCCeeeEEEeCCCCCcEEEEEcCCeeeEeeC
Q 007129          161 LVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAG  208 (617)
Q Consensus       161 ~~tg~~~~l~Sw~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~~~g  208 (617)
                                        ..|.|.+.++++|...++  .  ...|.+|
T Consensus        84 ------------------~~~~~~~~L~~dGNlvly--~--~~~W~t~  109 (110)
T 3r0e_B           84 ------------------KQGEYVLILQDDGFGVIY--G--PAIFETS  109 (110)
T ss_dssp             ------------------SSSCCEEEECTTSCEEEE--C--SEEEESC
T ss_pred             ------------------CCCCEEEEEcCCccEEEe--c--CCEecCC
Confidence                              124578899999976554  3  3678765

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.97  E-value=7.5e-10  Score=120.22  Aligned_cols=109  Identities=22%  Similarity=0.257  Sum_probs=87.2

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccCC-CcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQH-RNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H-~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ++|...++||+|+||.||++... .++.||||.+....  ..+++..|+.++..++| +++..+..++......+|||||
T Consensus         7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~   84 (483)
T 3sv0_A            7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL   84 (483)
T ss_dssp             TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence            56888899999999999999975 48999999876432  23468899999999976 5666777777888899999999


Q ss_pred             cCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      + +++|.+++....  ..+++.                +...|+|+||||+|
T Consensus        85 ~-g~sL~~ll~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~N  133 (483)
T 3sv0_A           85 L-GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDN  133 (483)
T ss_dssp             C-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             C-CCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcce
Confidence            9 999999997432  234554                45578999999998

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.97  E-value=8.5e-10  Score=114.35  Aligned_cols=111  Identities=20%  Similarity=0.259  Sum_probs=88.9

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-C-cEEEEeecccCchhhHHHHHHHHHHHHccCCCc------ccceEEEEEeCCeE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-G-QEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRN------LVKLIGCCTQRDER  575 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g-~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~n------lv~l~g~~~~~~~~  575 (617)
                      ++|...++||+|+||.||++.... + +.||+|.++.. ....+.+.+|+.++.+++|++      ++.+.+++...+..
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~   97 (355)
T 2eu9_A           19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM   97 (355)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred             ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence            567788899999999999998754 4 68999999643 344577889999999887665      89999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++||||+ +++|.+++.... ...+++.                +...|+|+||||+|
T Consensus        98 ~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~N  153 (355)
T 2eu9_A           98 CIAFELL-GKNTFEFLKENN-FQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPEN  153 (355)
T ss_dssp             EEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGG
T ss_pred             EEEEecc-CCChHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH
Confidence            9999999 677888877643 1234444                45578899999998

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=98.96  E-value=4.3e-10  Score=124.69  Aligned_cols=107  Identities=14%  Similarity=0.046  Sum_probs=79.0

Q ss_pred             eecccCceeEEEEEEc-CCcEEEEeecccC----------chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEE
Q 007129          511 KLGEGGFGPVYKGVLI-EGQEIAAKRLSKS----------SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       511 ~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~----------~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      ..+.|++|.+.+.... -|+.+|||.+...          .....++|.+|+++|.++ .|+||++++++..+....|||
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            4556666655543322 3888999998642          123346899999999999 799999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCCC----------CcCCHHHHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYT----------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~----------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |||+++|+|.++|.....-          ..|...++..|+||||||.|
T Consensus       321 MEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~GIIHRDIKPeN  369 (569)
T 4azs_A          321 MEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWN  369 (569)
T ss_dssp             EECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCEESCCCGGG
T ss_pred             EecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCCceeccCchHh
Confidence            9999999999999875421          12566688899999999998

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.94  E-value=5.3e-10  Score=114.78  Aligned_cols=113  Identities=24%  Similarity=0.323  Sum_probs=91.0

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch------hhHHHHHHHHHHHHccC--CCcccceEEEEEeC
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG------QGMEEFENEVLLIAKLQ--HRNLVKLIGCCTQR  572 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~------~~~~~f~~Ev~~l~~l~--H~nlv~l~g~~~~~  572 (617)
                      ..++|...+.||+|+||.||++.... ++.||||.+.....      ...+.+.+|+.++.+++  |+|++++++++...
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~  120 (320)
T 3a99_A           41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP  120 (320)
T ss_dssp             CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred             ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence            34668888999999999999998754 88999999864321      12356788999999996  59999999999999


Q ss_pred             CeEEEEEeccCC-CCHHHHHhcCCCCCcCCH----------------HHHHhhhhcccccCC
Q 007129          573 DERMLIYEYLPN-KSLNDFIFGFLYTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       573 ~~~~lv~E~~~~-GsL~~~L~~~~~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      +..++|+|++.. ++|.+++....   .+++                -+...|+|+||||+|
T Consensus       121 ~~~~lv~e~~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~N  179 (320)
T 3a99_A          121 DSFVLILERPEPVQDLFDFITERG---ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN  179 (320)
T ss_dssp             SEEEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             CcEEEEEEcCCCCccHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHH
Confidence            999999999976 89999997632   2333                345578899999998

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=98.87  E-value=5e-09  Score=89.30  Aligned_cols=93  Identities=25%  Similarity=0.457  Sum_probs=68.0

Q ss_pred             CCCCCCCCceEEEeecCCceEEEecCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecCCCcccccC
Q 007129           74 DAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIA  153 (617)
Q Consensus        74 ~~pv~~~~~~l~l~~~G~~~L~l~d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~PtDTlLp  153 (617)
                      +.|+.+....|.+..|||  |||+++    +|+|++........++|.++|||||+|.+    +.++|+|-.+       
T Consensus        15 g~~L~~g~~~L~~q~dGN--Lvl~~~----~Wssnt~~~~~~~~l~l~~dGnLvl~d~~----~~~vWss~t~-------   77 (109)
T 3r0e_A           15 EGHLKNGDFDLVMQDDCN--LVLYNG----NWQSNTANNGRDCKLTLTDYGELVIKNGD----GSTVWKSGAQ-------   77 (109)
T ss_dssp             TCEEEETTEEEEECTTSC--EEEETT----TEECCCTTSCSSCEEEECTTSCEEEECTT----SCEEEECCCC-------
T ss_pred             CCEeECCCEEEEEecCCe--EEEEeC----eEEcCCCCCCCcEEEEEcCCCeEEEEeCC----CCEEEcCCCc-------
Confidence            444444457899999999  999985    79999864334568899999999999863    5689975210       


Q ss_pred             CceeeeeeecCceeEEEEcccCCCCCCeeeEEEeCCCCCcEEEEEcCCeeeEeeCCCC
Q 007129          154 GMKLGVNLVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGSWN  211 (617)
Q Consensus       154 gq~L~~~~~tg~~~~l~Sw~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~~~g~~~  211 (617)
                                              ...+.|.+.++++|...++  .  .+.|.+++|-
T Consensus        78 ------------------------~~~~~~~~~L~~dGNlvly--~--~~~W~s~t~~  107 (109)
T 3r0e_A           78 ------------------------SVKGNYAAVVHPDGRLVVF--G--PSVFKIDPWV  107 (109)
T ss_dssp             ------------------------CSSSCCEEEEETTTEEEEE--C--SEEEEECTTS
T ss_pred             ------------------------CCCcCEEEEEcCCCeEEEE--e--cCEECCCCcc
Confidence                                    1235678899999965544  3  5789998873

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=98.66  E-value=1.5e-07  Score=79.48  Aligned_cols=77  Identities=26%  Similarity=0.374  Sum_probs=59.1

Q ss_pred             ceEEEeecCCceEEEecCCCcEEEEecCCC-CCCCceEEEecCCCEEEecCCCCCCCcceEeecCCCcccccCCceeeee
Q 007129           82 GALNISSQGNATLVLLNSTNGIVWSSNASR-TARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVN  160 (617)
Q Consensus        82 ~~l~l~~~G~~~L~l~d~~~~~vWss~~~~-~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~PtDTlLpgq~L~~~  160 (617)
                      -+|.+..|||  |||.+. +.+||++++.. ......+.|.++|||||+|.+    ++++|.|-.               
T Consensus        21 y~l~~q~DgN--Lvly~~-~~~vW~ant~~~~~~~~~L~l~~dGnLvL~d~~----~~~vWss~t---------------   78 (105)
T 4h3o_A           21 YHFIMQDDCN--LVLYDH-STSTWASNTEIGGKSGCSAVLQSDGNFVVYDSS----GRSLWASHS---------------   78 (105)
T ss_dssp             EEEEECTTSC--EEEEET-TEEEEECCCCCTTCCSCEEEECTTSCEEEECTT----CCEEEECCC---------------
T ss_pred             EEEEECCCCe--EEEEEC-CEEEEEecCCCCCCccEEEEEeCCccEEEECCC----cEEEEEecC---------------
Confidence            5788999999  999986 57899999853 334567899999999999974    678998621               


Q ss_pred             eecCceeEEEEcccCCCCCCeeeEEEeCCCCCcEEE
Q 007129          161 LVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAV  196 (617)
Q Consensus       161 ~~tg~~~~l~Sw~s~~d~s~G~~~l~~~~~g~~~~~  196 (617)
                                      ....+.|.+.++++|...++
T Consensus        79 ----------------~~~~~~~~l~L~ddGNlVly   98 (105)
T 4h3o_A           79 ----------------TRGSGNYILILQDDGNVIIY   98 (105)
T ss_dssp             ----------------CCCSSCEEEEECTTSCEEEE
T ss_pred             ----------------CCCCCCEEEEEeCCCeEEEE
Confidence                            11345688999999976554

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=98.62  E-value=7.9e-08  Score=94.00  Aligned_cols=87  Identities=26%  Similarity=0.363  Sum_probs=65.8

Q ss_pred             ceEEEeecCCceEEEecCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecCCCcccccCCceeeeee
Q 007129           82 GALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNL  161 (617)
Q Consensus        82 ~~l~l~~~G~~~L~l~d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~PtDTlLpgq~L~~~~  161 (617)
                      -+|.+..||+  |+|.+. +++||.+|+... ....++|.++|||||+|.+    +.++|+|+++.              
T Consensus        28 f~l~f~~~gn--l~ly~~-~~~vW~an~~~~-~~~~l~l~~dGnLvl~d~~----~~~vW~s~~~~--------------   85 (236)
T 1dlp_A           28 FRFTMQSDCN--LVLFDS-DVRVWASNTAGA-TGCRAVLQSDGLLVILTAQ----NTIRWSSGTKG--------------   85 (236)
T ss_dssp             EEEEECTTSC--EEEEES-SSEEECCCCCSC-SCCBCCBCSSSCBCCBCTT----TCCSCCCCCCC--------------
T ss_pred             EEEEECCCCc--EEEEEC-CEEEEECCCCCC-CCeEEEEcCCCcEEEEcCC----CcEEEeCCccc--------------
Confidence            5677888899  999886 689999997633 5667899999999999864    67899998751              


Q ss_pred             ecCceeEEEEcccCCCCCCeeeEEEeCCCCCcEEEEEcCCeeeEeeCCCC
Q 007129          162 VTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGSWN  211 (617)
Q Consensus       162 ~tg~~~~l~Sw~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~~~g~~~  211 (617)
                                       ..+.|.+.++++|...++  . . .+|.+..+.
T Consensus        86 -----------------~~~~~~~~l~d~Gnlvl~--~-~-~~W~S~~~p  114 (236)
T 1dlp_A           86 -----------------SIGNYVLVLQPDRTVTIY--G-P-GLWDSGTSN  114 (236)
T ss_dssp             -----------------CSSCCEEEECSSSCEEEE--C-S-EEEECSCCC
T ss_pred             -----------------cCCcEEEEEeCCCCEEEe--c-C-CEEECCCCC
Confidence                             234567888888876553  2 2 688877654

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.51  E-value=4.9e-08  Score=96.90  Aligned_cols=108  Identities=12%  Similarity=0.095  Sum_probs=75.1

Q ss_pred             CCCcceecccCceeEEEEEE-cCCcE--EEEeecccCch------------------------hhHHHHHHHHHHHHccC
Q 007129          506 FSDKNKLGEGGFGPVYKGVL-IEGQE--IAAKRLSKSSG------------------------QGMEEFENEVLLIAKLQ  558 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l-~~g~~--vAvK~l~~~~~------------------------~~~~~f~~Ev~~l~~l~  558 (617)
                      +...+.||+|+||.||++.. .+|+.  ||||.++....                        .....+.+|+..+..++
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            34567899999999999998 67888  99998643210                        01136889999999998


Q ss_pred             CCcc--cceEEEEEeCCeEEEEEeccCC-C----CHHHHHhcCCCC----------CcCCHHH-HHhhhhcccccCC
Q 007129          559 HRNL--VKLIGCCTQRDERMLIYEYLPN-K----SLNDFIFGFLYT----------EHFFWSF-FFSFENLSLVDRN  617 (617)
Q Consensus       559 H~nl--v~l~g~~~~~~~~~lv~E~~~~-G----sL~~~L~~~~~~----------~~l~w~~-r~~i~~~~~~~~n  617 (617)
                      |+++  ..++..    ...+|||||+.. |    +|.+++......          ..|...+ +..|+|+||||.|
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~N  201 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYN  201 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTS
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHH
Confidence            8754  344432    356899999942 4    788776541101          1133445 7789999999998

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=98.50  E-value=6.4e-08  Score=102.96  Aligned_cols=114  Identities=11%  Similarity=0.109  Sum_probs=74.2

Q ss_pred             ccCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCc---hhhHHHHHHHHHHHHccCC-Cccc----------ceE-
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQH-RNLV----------KLI-  566 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H-~nlv----------~l~-  566 (617)
                      +..|...+.||+|+||.||++... .|+.||||++....   ....+.|.+|+.++..++| +|..          .+. 
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~  156 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  156 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred             ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence            345666789999999999999965 48999999987332   2335789999999999987 2221          111 


Q ss_pred             ----------EEEEe-----CCeEEEEEeccCCCCHHHHHhc----CCCCCcCCHH----------------HHHhhhhc
Q 007129          567 ----------GCCTQ-----RDERMLIYEYLPNKSLNDFIFG----FLYTEHFFWS----------------FFFSFENL  611 (617)
Q Consensus       567 ----------g~~~~-----~~~~~lv~E~~~~GsL~~~L~~----~~~~~~l~w~----------------~r~~i~~~  611 (617)
                                .+...     ....+++++++ .++|.+++..    ......++|.                +...|+|+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHr  235 (413)
T 3dzo_A          157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT  235 (413)
T ss_dssp             EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence                      11111     12345666655 7899998841    1112234444                44567999


Q ss_pred             ccccCC
Q 007129          612 SLVDRN  617 (617)
Q Consensus       612 ~~~~~n  617 (617)
                      ||||+|
T Consensus       236 DiKp~N  241 (413)
T 3dzo_A          236 YLRPVD  241 (413)
T ss_dssp             CCCGGG
T ss_pred             Ccccce
Confidence            999998

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.39  E-value=2.9e-08  Score=103.47  Aligned_cols=111  Identities=7%  Similarity=-0.009  Sum_probs=69.9

Q ss_pred             CCCCcceecccCceeEEEEEEcCCcEEEEeecccCc--------------hhhHHHH--------HHHHHHHHccCCCcc
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSS--------------GQGMEEF--------ENEVLLIAKLQHRNL  562 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~--------------~~~~~~f--------~~Ev~~l~~l~H~nl  562 (617)
                      -+...+.||+|+||.||++...+|+.||||.++...              .......        .+|...|.++++.++
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            367788999999999999998889999999875310              0011122        234555555544433


Q ss_pred             cceEEEEEeCCeEEEEEeccCCCCHHHHHhcCCCC-------CcCCHHHHHhhhhcccccCC
Q 007129          563 VKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYT-------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       563 v~l~g~~~~~~~~~lv~E~~~~GsL~~~L~~~~~~-------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      .-..-+...  ..+|||||++++.|..++......       ..+...++..|+|+||||.|
T Consensus       176 ~vp~p~~~~--~~~LVME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~N  235 (397)
T 4gyi_A          176 PVPEPIAQS--RHTIVMSLVDALPMRQVSSVPDPASLYADLIALILRLAKHGLIHGDFNEFN  235 (397)
T ss_dssp             SCCCEEEEE--TTEEEEECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTS
T ss_pred             CCCeeeecc--CceEEEEecCCccHhhhcccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHH
Confidence            221111111  236999999998887654321110       11334477789999999998

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=96.72  E-value=0.0032  Score=61.66  Aligned_cols=88  Identities=14%  Similarity=0.015  Sum_probs=69.0

Q ss_pred             hccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccC-CCcccceEEEEEeCCeEEEEEe
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQ-HRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ....+.....++.|+.+.||+... .++.+++|............+.+|+.++..+. |..+.+++++....+..++|||
T Consensus        12 ~l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e   90 (263)
T 3tm0_A           12 LIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMS   90 (263)
T ss_dssp             HHTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred             HhccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEE
Confidence            345566666788888899999875 46889999986432223346889999998884 6778899999998889999999


Q ss_pred             ccCCCCHHHH
Q 007129          581 YLPNKSLNDF  590 (617)
Q Consensus       581 ~~~~GsL~~~  590 (617)
                      |+++.+|.+.
T Consensus        91 ~i~G~~l~~~  100 (263)
T 3tm0_A           91 EADGVLCSEE  100 (263)
T ss_dssp             CCSSEEHHHH
T ss_pred             ecCCeehhhc
Confidence            9999998775

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=95.52  E-value=0.0086  Score=58.10  Aligned_cols=75  Identities=12%  Similarity=0.133  Sum_probs=57.0

Q ss_pred             eec-ccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCc--ccceEEEEEeCCeEEEEEeccCCCCH
Q 007129          511 KLG-EGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRN--LVKLIGCCTQRDERMLIYEYLPNKSL  587 (617)
Q Consensus       511 ~lG-~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~n--lv~l~g~~~~~~~~~lv~E~~~~GsL  587 (617)
                      .++ .|..+.||+....+|..+++|.....   ....+.+|+.++..+.+.+  +.+++++...++..++||||+++.+|
T Consensus        26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l  102 (264)
T 1nd4_A           26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL  102 (264)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             ecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCccc
Confidence            444 55568999998766788999987543   2346788998888885444  45688888777788999999999887


Q ss_pred             H
Q 007129          588 N  588 (617)
Q Consensus       588 ~  588 (617)
                      .
T Consensus       103 ~  103 (264)
T 1nd4_A          103 L  103 (264)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=91.03  E-value=0.23  Score=50.66  Aligned_cols=79  Identities=20%  Similarity=0.323  Sum_probs=56.1

Q ss_pred             CcceecccCceeEEEEEEcCCcEEEEeecc--cCc-hhhHHHHHHHHHHHHccC--CCcccceEEEEEeC---CeEEEEE
Q 007129          508 DKNKLGEGGFGPVYKGVLIEGQEIAAKRLS--KSS-GQGMEEFENEVLLIAKLQ--HRNLVKLIGCCTQR---DERMLIY  579 (617)
Q Consensus       508 ~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~--~~~-~~~~~~f~~Ev~~l~~l~--H~nlv~l~g~~~~~---~~~~lv~  579 (617)
                      ..+.++.|.++.||+.... +..+++|+..  ... ......+.+|+.++..+.  +..+.++++++...   +..++||
T Consensus        42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm  120 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM  120 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred             eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence            3467899999999998875 4577888765  321 122356888999998886  45678899988766   3478999


Q ss_pred             eccCCCCH
Q 007129          580 EYLPNKSL  587 (617)
Q Consensus       580 E~~~~GsL  587 (617)
                      ||+++..+
T Consensus       121 e~v~G~~l  128 (359)
T 3dxp_A          121 EFVSGRVL  128 (359)
T ss_dssp             ECCCCBCC
T ss_pred             EecCCeec
Confidence            99998877

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=90.44  E-value=0.38  Score=47.44  Aligned_cols=79  Identities=18%  Similarity=0.211  Sum_probs=56.7

Q ss_pred             CCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCC---CcccceEEEEEeCCeEEEEEec
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQH---RNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H---~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      .+...+.+|.|..+.||+..+.+|+.+.||+-..........|..|+..|..+..   .-+.++++..    ..++|+||
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~   91 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW   91 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred             CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence            3455678999999999999999999999998764433334568889988887742   2344555442    23689999


Q ss_pred             cCCCCH
Q 007129          582 LPNKSL  587 (617)
Q Consensus       582 ~~~GsL  587 (617)
                      ++.+..
T Consensus        92 l~~~~~   97 (288)
T 3f7w_A           92 VDERPP   97 (288)
T ss_dssp             CCCCCC
T ss_pred             ecccCC
Confidence            887653

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=88.33  E-value=0.18  Score=33.30  Aligned_cols=32  Identities=38%  Similarity=0.624  Sum_probs=23.6

Q ss_pred             cccccccccCCceeeccCCCCcccccCCCCCcC
Q 007129          285 DQCDNYALCGAYAVCNMNSNSAKCECLEGFVPK  317 (617)
Q Consensus       285 ~~C~~~~~CG~~g~C~~~~~~~~C~C~~Gf~~~  317 (617)
                      |+|. ...|-..|.|......+.|.|++||...
T Consensus         4 d~C~-~~pC~ngg~C~~~~~~~~C~C~~G~~G~   35 (39)
T 1edm_B            4 DQCE-SNPCLNGGSCKDDINSYECWCPFGFEGK   35 (39)
T ss_dssp             CTTT-TCCCCTTCEEEEETTEEEEECCTTCCST
T ss_pred             ccCC-CCCCCCCCEeEcCCCceEeECCCCCcCC
Confidence            5676 4678888999754444589999999754

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=86.24  E-value=1.9  Score=43.04  Aligned_cols=77  Identities=21%  Similarity=0.158  Sum_probs=59.8

Q ss_pred             CCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccC---CCcccceEEEEEeCCeEEEEEeccC
Q 007129          507 SDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQ---HRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       507 ~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~---H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      ...+.|+.|.+..+|+... +++.+.+|....   .....|..|...|..+.   ...+.++++++...+..++||||++
T Consensus        39 ~~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~---~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~  114 (312)
T 3jr1_A           39 KHKEKLYSGEMNEIWLIND-EVQTVFVKINER---SYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN  114 (312)
T ss_dssp             CEEEEECCSSSSEEEEEES-SSCEEEEEEEEG---GGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred             eeeEEeCCccceeeeEEEE-CCCeEEEEeCCc---ccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence            3456789999999999876 466788887653   23567888988887773   3667888888887788999999999


Q ss_pred             CCCH
Q 007129          584 NKSL  587 (617)
Q Consensus       584 ~GsL  587 (617)
                      +..+
T Consensus       115 G~~~  118 (312)
T 3jr1_A          115 KSKN  118 (312)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8765

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=85.55  E-value=2.9  Score=40.26  Aligned_cols=78  Identities=15%  Similarity=0.167  Sum_probs=56.9

Q ss_pred             eecccCce-eEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccC-CCcccceEEEEEeCCeEEEEEeccCCCCH
Q 007129          511 KLGEGGFG-PVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQ-HRNLVKLIGCCTQRDERMLIYEYLPNKSL  587 (617)
Q Consensus       511 ~lG~G~fG-~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~~~~~~lv~E~~~~GsL  587 (617)
                      .+..|..| .||+-.... +..+.+|+-..   ....++.+|...+..+. +--+-++++++...+..++|||++++.++
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~  107 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA  107 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence            45556655 588876654 56788887642   23457888998888774 44467889999999999999999999887


Q ss_pred             HHHH
Q 007129          588 NDFI  591 (617)
Q Consensus       588 ~~~L  591 (617)
                      .+..
T Consensus       108 ~~~~  111 (272)
T 4gkh_A          108 FQVL  111 (272)
T ss_dssp             HHHH
T ss_pred             cccc
Confidence            6543

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=84.00  E-value=1.2  Score=46.01  Aligned_cols=75  Identities=12%  Similarity=0.162  Sum_probs=48.9

Q ss_pred             cceecccCceeEEEEEEc-CCcEEEEeecccCch-------hhHHHHHHHHHHHHccCC--Cccc-ceEEEEEeCCeEEE
Q 007129          509 KNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSG-------QGMEEFENEVLLIAKLQH--RNLV-KLIGCCTQRDERML  577 (617)
Q Consensus       509 ~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~-------~~~~~f~~Ev~~l~~l~H--~nlv-~l~g~~~~~~~~~l  577 (617)
                      .+.||.|.++.||++... .++.++||......+       ...+.+..|.+++..+.+  +..+ +++.+  ..+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            457999999999999764 367899997653211       123456778888877632  3333 55544  3455689


Q ss_pred             EEeccCCC
Q 007129          578 IYEYLPNK  585 (617)
Q Consensus       578 v~E~~~~G  585 (617)
                      ||||+++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999764

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=83.69  E-value=0.68  Score=32.87  Aligned_cols=33  Identities=24%  Similarity=0.569  Sum_probs=23.4

Q ss_pred             cccccc--cccCCceeec--cCCCCcccccCCCCCcC
Q 007129          285 DQCDNY--ALCGAYAVCN--MNSNSAKCECLEGFVPK  317 (617)
Q Consensus       285 ~~C~~~--~~CG~~g~C~--~~~~~~~C~C~~Gf~~~  317 (617)
                      ++|...  ..|-..|.|.  .....+.|.|++||...
T Consensus         4 ~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~   40 (53)
T 1egf_A            4 PGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGD   40 (53)
T ss_dssp             CCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSS
T ss_pred             ccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCC
Confidence            456543  4688889997  34344589999999764

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=81.89  E-value=0.19  Score=53.58  Aligned_cols=60  Identities=8%  Similarity=0.093  Sum_probs=18.1

Q ss_pred             cceecccCceeEEEEEEcC-CcEEEE------eecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEe
Q 007129          509 KNKLGEGGFGPVYKGVLIE-GQEIAA------KRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ  571 (617)
Q Consensus       509 ~~~lG~G~fG~Vykg~l~~-g~~vAv------K~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~  571 (617)
                      .++||   ||.||+|.+.. ..+|||      |..+..  ..+....|.+|..++.+.+|||+++.+++...
T Consensus       147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred             cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence            35676   99999999965 367888      666532  23344678999999999999999999888764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	617
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-23
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	6e-23
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	6e-23
d1kj1a_	109	b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium	2e-22
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	6e-22
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-21
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-21
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-21
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	4e-21
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-21
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	7e-21
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-20
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-20
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	5e-20
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	6e-20
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	9e-20
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-19
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-19
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-19
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-19
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	4e-19
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	5e-19
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	5e-19
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	7e-19
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-18
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-18
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-18
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-18
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-18
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	4e-18
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-17
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	4e-17
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	5e-17
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	5e-17
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-16
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-16
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-16
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-16
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-16
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	4e-16
d1dlpa2	120	b.78.1.1 (A:116-235) Fetuin-binding protein Scafet	1e-15
d1jpca_	108	b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan	1e-15
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-15
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-15
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-15
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-15
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	4e-15
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	6e-15
d1xd5a_	112	b.78.1.1 (A:) Gastrodianin (antifungal protein) {G	9e-15
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-14
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	6e-13
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-12
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-12
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-12
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-12
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-12
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-12
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	4e-12
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	4e-12
d1b2pa_	119	b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill	5e-12
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	8e-12
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	3e-11
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	8e-11
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	9e-11
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-10
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-10
d1dlpa1	115	b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p	7e-10
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	8e-10
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	3e-08
d2qfra1	112	b.1.12.1 (A:9-120) Purple acid phosphatase, N-term	0.004

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.2 bits (244), Expect = 1e-23
 Identities = 23/89 (25%), Positives = 47/89 (52%), Gaps = 1/89 (1%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
              +   ++G G FG V+ G  +   ++A K + + +    E+F  E  ++ KL H  LV
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLV 63

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
           +L G C ++    L++E++ +  L+D++ 
Sbjct: 64  QLYGVCLEQAPICLVFEFMEHGCLSDYLR 92

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.3 bits (239), Expect = 6e-23
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           ++ +   +LG G FG V  G      ++A K + + S    +EF  E  ++  L H  LV
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 62

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
           +L G CT++    +I EY+ N  L +++ 
Sbjct: 63  QLYGVCTKQRPIFIITEYMANGCLLNYLR 91

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.6 bits (240), Expect = 6e-23
 Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 2/90 (2%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E      +LG G FG V+ G      ++A K L + S    + F  E  L+ +LQH+ LV
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 71

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFIFG 593
           +L    TQ +   +I EY+ N SL DF+  
Sbjct: 72  RLYAVVTQ-EPIYIITEYMENGSLVDFLKT 100

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

 Score = 90.0 bits (223), Expect = 2e-22
 Identities = 26/129 (20%), Positives = 50/129 (38%), Gaps = 21/129 (16%)

Query: 18  RDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPL 77
           R+ L  G+ +  G++L      +              L ++     + T +W +N     
Sbjct: 1   RNLLTNGEGLYAGQSLDVEP--YHFIMQEDC-----NLVLYD----HSTSVWASNTGILG 49

Query: 78  SDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPD 137
                   + S GN   V+ ++    +W+S++ R   N V VL E GN+V+         
Sbjct: 50  KKGCK-AVLQSDGN--FVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIY-------G 99

Query: 138 NFLWQSFDY 146
           + +W +  Y
Sbjct: 100 SDIWSTGTY 108

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.3 bits (234), Expect = 6e-22
 Identities = 25/108 (23%), Positives = 51/108 (47%), Gaps = 1/108 (0%)

Query: 499 IANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKL 557
           + +  + ++   K+G+G  G VY  + +  GQE+A ++++       E   NE+L++ + 
Sbjct: 15  VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN 74

Query: 558 QHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFF 605
           ++ N+V  +      DE  ++ EYL   SL D +      E    +  
Sbjct: 75  KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVC 122

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.2 bits (231), Expect = 1e-21
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)

Query: 502 ATENFS-DKNKLGEGGFGPVYKGVLI---EGQEIAAKRLSKSSGQG-MEEFENEVLLIAK 556
             +N      +LG G FG V +GV     +  ++A K L + + +   EE   E  ++ +
Sbjct: 6   KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQ 65

Query: 557 LQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFG 593
           L +  +V+LIG C Q +  ML+ E      L+ F+ G
Sbjct: 66  LDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVG 101

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.2 bits (231), Expect = 2e-21
 Identities = 17/92 (18%), Positives = 36/92 (39%), Gaps = 2/92 (2%)

Query: 502 ATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGM-EEFENEVLLIAKLQH 559
             ++F   ++LG G  G V+K      G  +A K +       +  +   E+ ++ +   
Sbjct: 4   KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS 63

Query: 560 RNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
             +V   G      E  +  E++   SL+  +
Sbjct: 64  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL 95

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.3 bits (229), Expect = 2e-21
 Identities = 20/89 (22%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
              +   ++G G FG VYKG       +    ++  + Q ++ F+NEV ++ K +H N++
Sbjct: 8   GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
             +G  T   +  ++ ++    SL   + 
Sbjct: 68  LFMGYSTA-PQLAIVTQWCEGSSLYHHLH 95

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 91.7 bits (227), Expect = 4e-21
 Identities = 29/90 (32%), Positives = 54/90 (60%), Gaps = 2/90 (2%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNL 562
            + + K+KLG G +G VY+GV  +    +A K L + + + +EEF  E  ++ +++H NL
Sbjct: 17  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 75

Query: 563 VKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
           V+L+G CT+     +I E++   +L D++ 
Sbjct: 76  VQLLGVCTREPPFYIITEFMTYGNLLDYLR 105

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 92.4 bits (229), Expect = 4e-21
 Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 4/93 (4%)

Query: 503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQG---MEEFENEVLLIAKLQ 558
            + FSD  ++G G FG VY    +   + +A K++S S  Q     ++   EV  + KL+
Sbjct: 14  EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73

Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           H N ++  GC  +     L+ EY    + +   
Sbjct: 74  HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLE 106

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.5 bits (224), Expect = 7e-21
 Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 4/90 (4%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           +       +G+G FG V  G    G ++A K +   +    + F  E  ++ +L+H NLV
Sbjct: 7   KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 63

Query: 564 KLIGCCTQRDERM-LIYEYLPNKSLNDFIF 592
           +L+G   +    + ++ EY+   SL D++ 
Sbjct: 64  QLLGVIVEEKGGLYIVTEYMAKGSLVDYLR 93

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.9 bits (220), Expect = 3e-20
 Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 1/93 (1%)

Query: 501 NATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQH 559
           N  + +    +LG+G FG VYK    E     AAK +   S + +E++  E+ ++A   H
Sbjct: 9   NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 68

Query: 560 RNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
            N+VKL+      +   ++ E+    +++  + 
Sbjct: 69  PNIVKLLDAFYYENNLWILIEFCAGGAVDAVML 101

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.6 bits (219), Expect = 5e-20
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 2/90 (2%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E+   + KLG+G FG V+ G       +A K L   +    E F  E  ++ KL+H  LV
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 75

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFIFG 593
           +L    ++ +   ++ EY+   SL DF+ G
Sbjct: 76  QLYAVVSE-EPIYIVTEYMSKGSLLDFLKG 104

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.7 bits (219), Expect = 5e-20
 Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 6/102 (5%)

Query: 509 KNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGC 568
           +  +G+G FG V++G    G+E+A K  S    +     E E+     L+H N++  I  
Sbjct: 8   QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERS-WFREAEIYQTVMLRHENILGFIAA 65

Query: 569 CTQRD----ERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFFF 606
             + +    +  L+ +Y  + SL D++  +  T         
Sbjct: 66  DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 107

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 88.6 bits (219), Expect = 6e-20
 Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 2/98 (2%)

Query: 496 WMAIANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEE-FENEVLL 553
           W    +  + +  ++ LG G F  V         + +A K ++K + +G E   ENE+ +
Sbjct: 1   WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAV 60

Query: 554 IAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           + K++H N+V L           LI + +    L D I
Sbjct: 61  LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI 98

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.3 bits (218), Expect = 9e-20
 Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 8/98 (8%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE------GQEIAAKRLSKSSGQG-MEEFENEVLLIAK 556
              S    LG G FG V +              +A K L  S+     E   +E+ +++ 
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 557 L-QHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFG 593
           L  H N+V L+G CT     ++I EY     L +F+  
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR 120

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 88.6 bits (219), Expect = 1e-19
 Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 1/90 (1%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNL 562
           +++    +LG G FG V++      G   AAK +        E    E+  ++ L+H  L
Sbjct: 26  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 85

Query: 563 VKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
           V L       +E ++IYE++    L + + 
Sbjct: 86  VNLHDAFEDDNEMVMIYEFMSGGELFEKVA 115

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 88.2 bits (218), Expect = 1e-19
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNL 562
           + +    +LG G FG V++ V    G+   AK ++          +NE+ ++ +L H  L
Sbjct: 29  DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 88

Query: 563 VKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           + L      + E +LI E+L    L D I
Sbjct: 89  INLHDAFEDKYEMVLILEFLSGGELFDRI 117

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.6 bits (216), Expect = 2e-19
 Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 12/115 (10%)

Query: 490 ELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIEG---QEIAAKRLSK-SSGQGME 545
             P+ DW        +   ++ +GEG FG V K  + +     + A KR+ + +S     
Sbjct: 3   IYPVLDW-------NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR 55

Query: 546 EFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEH 599
           +F  E+ ++ KL  H N++ L+G C  R    L  EY P+ +L DF+      E 
Sbjct: 56  DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLET 110

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 86.8 bits (214), Expect = 2e-19
 Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 17/116 (14%)

Query: 485 REEEMELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIE------GQEIAAKRLSK 538
           +   +E P            N      +GEG FG V++              +A K L +
Sbjct: 4   KLLSLEYP----------RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKE 53

Query: 539 SSGQGME-EFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFG 593
            +   M+ +F+ E  L+A+  + N+VKL+G C       L++EY+    LN+F+  
Sbjct: 54  EASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRS 109

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.5 bits (211), Expect = 4e-19
 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 6/90 (6%)

Query: 508 DKNKLGEGGFGPVYKGVLIE---GQEIAAKRLSKSSGQG--MEEFENEVLLIAKLQHRNL 562
           +  +LG G FG V KG        + +A K L   +      +E   E  ++ +L +  +
Sbjct: 11  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70

Query: 563 VKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
           V++IG C + +  ML+ E      LN ++ 
Sbjct: 71  VRMIGIC-EAESWMLVMEMAELGPLNKYLQ 99

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.4 bits (211), Expect = 5e-19
 Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 2/105 (1%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGM-EEFENEVLLIAKLQHRN 561
           E++     LGEG +G V   V     + +A K +         E  + E+ +   L H N
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64

Query: 562 LVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFFF 606
           +VK  G   + + + L  EY     L D I   +         FF
Sbjct: 65  VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 109

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.2 bits (210), Expect = 5e-19
 Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 8/96 (8%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLI----EGQEIAAKRLSK---SSGQGMEEFENEVLLIAK 556
           ++     KLG+G FG V +G       +   +A K L     S  + M++F  EV  +  
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67

Query: 557 LQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
           L HRNL++L G       +M + E  P  SL D + 
Sbjct: 68  LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLR 102

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 85.2 bits (210), Expect = 7e-19
 Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 14/113 (12%)

Query: 494 FDWMAIANATENFSDK---------NKLGEGGFGPVYKGVLI----EGQEIAAKRLSKS- 539
           F +     A   F+ +           +G G FG V  G L         +A K L    
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 540 SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
           + +   +F +E  ++ +  H N++ L G  T+    M+I E++ N SL+ F+ 
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR 119

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.8 bits (209), Expect = 1e-18
 Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 8/114 (7%)

Query: 505 NFSDKNKLGEGGFGPVYKGVLIE----GQEIAAKRLSKSSGQG-MEEFENEVLLIAKLQH 559
           +F     +G G FG VY G L++        A K L++ +  G + +F  E +++    H
Sbjct: 30  HF--NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 87

Query: 560 RNLVKLIGCCTQRDER-MLIYEYLPNKSLNDFIFGFLYTEHFFWSFFFSFENLS 612
            N++ L+G C + +   +++  Y+ +  L +FI    +         F  +   
Sbjct: 88  PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 141

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.2 bits (210), Expect = 1e-18
 Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 8/98 (8%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE------GQEIAAKRLSKSSGQG-MEEFENEVLLIAK 556
           EN      LG G FG V               ++A K L + +     E   +E+ ++ +
Sbjct: 37  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96

Query: 557 L-QHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFG 593
           L  H N+V L+G CT      LI+EY     L +++  
Sbjct: 97  LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRS 134

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.5 bits (206), Expect = 2e-18
 Identities = 23/93 (24%), Positives = 34/93 (36%), Gaps = 4/93 (4%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQH 559
           E+F     LGEG F  V     +   +E A K L K        +     E  ++++L H
Sbjct: 8   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67

Query: 560 RNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
              VKL       ++      Y  N  L  +I 
Sbjct: 68  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR 100

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.8 bits (206), Expect = 3e-18
 Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 7/96 (7%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVL------IEGQEIAAKRLSKS-SGQGMEEFENEVLLIAK 556
           E  +   +LG+G FG VY+GV            +A K ++++ S +   EF NE  ++ +
Sbjct: 20  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 79

Query: 557 LQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
               ++V+L+G  +Q    ++I E +    L  ++ 
Sbjct: 80  FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 115

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.7 bits (204), Expect = 3e-18
 Identities = 21/103 (20%), Positives = 37/103 (35%), Gaps = 5/103 (4%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHR 560
           E++     +G G +G   K      G+ +  K L   S      +   +EV L+ +L+H 
Sbjct: 4   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 63

Query: 561 NLVKLIGCCTQRDERM--LIYEYLPNKSLNDFIFGFLYTEHFF 601
           N+V+       R      ++ EY     L   I        + 
Sbjct: 64  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 106

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.7 bits (206), Expect = 4e-18
 Identities = 17/105 (16%), Positives = 41/105 (39%), Gaps = 2/105 (1%)

Query: 501 NATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGM-EEFENEVLLIAKLQ 558
           +    +++ + +GEG +G V           +A K++S    Q   +    E+ ++ + +
Sbjct: 5   DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 64

Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWS 603
           H N++ +           +   YL    +   ++  L T+H    
Sbjct: 65  HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSND 109

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.6 bits (201), Expect = 1e-17
 Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 2/104 (1%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           E +     LG G FG V++ V    ++    +  K  G      + E+ ++   +HRN++
Sbjct: 5   EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNIL 64

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDFI--FGFLYTEHFFWSFF 605
            L       +E ++I+E++    + + I    F   E    S+ 
Sbjct: 65  HLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYV 108

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.8 bits (196), Expect = 4e-17
 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLI----EGQEIAAKRLSKSSGQGM-EEFENEVLLIAKLQ 558
           E       +GEG FG V++G+ +        +A K     +   + E+F  E L + +  
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66

Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
           H ++VKLIG  T+ +   +I E      L  F+ 
Sbjct: 67  HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQ 99

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.3 bits (195), Expect = 5e-17
 Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 7/93 (7%)

Query: 509 KNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKL 565
             ++G G F  VYKG+  E   E+A   L     +    + F+ E  ++  LQH N+V+ 
Sbjct: 14  DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF 73

Query: 566 IGCC----TQRDERMLIYEYLPNKSLNDFIFGF 594
                     +   +L+ E + + +L  ++  F
Sbjct: 74  YDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF 106

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 80.5 bits (198), Expect = 5e-17
 Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 7/95 (7%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQ- 558
            +FS    +G GGFG VY     + G+  A K L K      QG     NE ++++ +  
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 559 --HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
                +V +       D+   I + +    L+  +
Sbjct: 64  GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL 98

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.1 bits (192), Expect = 1e-16
 Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 4/92 (4%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQH 559
           E+F     LG+G FG VY     +    +A K L K+         +   EV + + L+H
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65

Query: 560 RNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
            N+++L G         LI EY P  ++   +
Sbjct: 66  PNILRLYGYFHDATRVYLILEYAPLGTVYREL 97

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.3 bits (192), Expect = 1e-16
 Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 6/93 (6%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQE-----IAAKRLSKSSGQGM-EEFENEVLLIAKL 557
              + +  +G G FG VYKG+L          +A K L     +    +F  E  ++ + 
Sbjct: 7   SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 66

Query: 558 QHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDF 590
            H N+++L G  ++    M+I EY+ N +L+ F
Sbjct: 67  SHHNIIRLEGVISKYKPMMIITEYMENGALDKF 99

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 78.6 bits (193), Expect = 2e-16
 Identities = 21/107 (19%), Positives = 43/107 (40%), Gaps = 4/107 (3%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQH 559
           ++F     LG G FG V+       G+  A K L K      + +E   +E L+++ + H
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63

Query: 560 RNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFFF 606
             ++++ G      +  +I +Y+    L   +       +    F+ 
Sbjct: 64  PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYA 110

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 77.9 bits (191), Expect = 2e-16
 Identities = 18/97 (18%), Positives = 34/97 (35%), Gaps = 8/97 (8%)

Query: 503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQG---MEEFENEVLLIAKLQ 558
           ++ +     LG GG   V+    +   +++A K L     +       F  E    A L 
Sbjct: 6   SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65

Query: 559 HRNLVKLIGCCTQRDER----MLIYEYLPNKSLNDFI 591
           H  +V +               ++ EY+   +L D +
Sbjct: 66  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV 102

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 78.0 bits (191), Expect = 2e-16
 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 2/91 (2%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAK--RLSKSSGQGMEEFENEVLLIAKLQHRN 561
           E +    K+GEG +G VYK     G+  A K  RL K           E+ ++ +L+H N
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61

Query: 562 LVKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
           +VKL      +   +L++E+L          
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV 92

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.7 bits (188), Expect = 4e-16
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 11/100 (11%)

Query: 504 ENFSDK----NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS------GQGMEEFENEVL 552
           EN  D      +LG G F  V K      G + AAK + K        G   E+ E EV 
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65

Query: 553 LIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
           ++ ++QH N++ L      + + +LI E +    L DF+ 
Sbjct: 66  ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA 105

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 71.5 bits (175), Expect = 1e-15
 Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 57  IWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNP 116
           I Y   GN       +    L      L++ +  N  LVL +  +  VWS+N +      
Sbjct: 12  ILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCN--LVLFDR-DDRVWSTNTAGKGTGC 68

Query: 117 VAVLLESGNLVVKDGKDIDPDNFLWQSFDYPS 148
            AVL  +G + V   +    +  +W S +  S
Sbjct: 69  RAVLQPNGRMDVLTNQ----NIAVWTSGNSRS 96

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

 Score = 71.2 bits (174), Expect = 1e-15
 Identities = 29/128 (22%), Positives = 48/128 (37%), Gaps = 22/128 (17%)

Query: 19  DTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLS 78
           + L  G+++  GE L     SF              L ++         IW  N      
Sbjct: 2   NILYSGETLSTGEFLN--YGSFVFIMQEDCN-----LVLYD----VDKPIWATNTGGL-- 48

Query: 79  DRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDN 138
            RS  L++ + GN  LV+ N +N  +W+SN      N V +L +  N+V+          
Sbjct: 49  SRSCFLSMQTDGN--LVVYNPSNKPIWASNTGGQNGNYVCILQKDRNVVIY-------GT 99

Query: 139 FLWQSFDY 146
             W +  +
Sbjct: 100 DRWATGTH 107

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.3 bits (184), Expect = 2e-15
 Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 10/99 (10%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE--------GQEIAAKRLSK-SSGQGMEEFENEVLLI 554
           +       LGEG FG V     I           ++A K L   ++ + + +  +E+ ++
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72

Query: 555 AKL-QHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
             + +H+N++ L+G CTQ     +I EY    +L +++ 
Sbjct: 73  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 111

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.6 bits (185), Expect = 2e-15
 Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 11/106 (10%)

Query: 505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLV 563
           +++D   +G G FG VY+  L + G+ +A K++ +           E+ ++ KL H N+V
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIV 76

Query: 564 KLIGCCTQRDERM------LIYEYLPNKSLNDFIFGFLYTEHFFWS 603
           +L        E+       L+ +Y+P              +     
Sbjct: 77  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.8 bits (183), Expect = 3e-15
 Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 5/93 (5%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFEN----EVLLIAKLQ 558
           E+F     LG+G FG V+     +  Q  A K L K      ++ E     + +L    +
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61

Query: 559 HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           H  L  +      ++    + EYL    L   I
Sbjct: 62  HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI 94

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.4 bits (182), Expect = 3e-15
 Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 8/102 (7%)

Query: 497 MAIANATENFSDKNKLGEGGFGPVYKGVLIEGQE-----IAAKRLSKS-SGQGMEEFENE 550
           + I   TE F     LG G FG VYKG+ I   E     +A K L ++ S +  +E  +E
Sbjct: 3   LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 61

Query: 551 VLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
             ++A + + ++ +L+G C       LI + +P   L D++ 
Sbjct: 62  AYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVR 102

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.1 bits (181), Expect = 4e-15
 Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 3/112 (2%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHR 560
           ENF    K+GEG +G VYK      G+ +A K++     +         E+ L+ +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61

Query: 561 NLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFFFSFENLS 612
           N+VKL+      ++  L++E+L            L          + F+ L 
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.7 bits (180), Expect = 6e-15
 Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 6/87 (6%)

Query: 510 NKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEE-----FENEVLLIAKLQHRNLV 563
           + LGEG F  VYK       Q +A K++        ++        E+ L+ +L H N++
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 564 KLIGCCTQRDERMLIYEYLPNKSLNDF 590
            L+     +    L+++++        
Sbjct: 64  GLLDAFGHKSNISLVFDFMETDLEVII 90

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

 Score = 68.7 bits (167), Expect = 9e-15
 Identities = 25/129 (19%), Positives = 48/129 (37%), Gaps = 20/129 (15%)

Query: 19  DTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLS 78
           D LN G  +  G +L      +     +          + Y    N   +W +  +   S
Sbjct: 2   DRLNSGHQLDTGGSLAEGG--YLFIIQNDCNL------VLYD---NNRAVWASGTNGKAS 50

Query: 79  DRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDN 138
                L + + GN   +++ S +  +W+SN +R   N   +L    N+V+ D      +N
Sbjct: 51  GC--VLKMQNDGN---LVIYSGSRAIWASNTNRQNGNYYLILQRDRNVVIYDN----SNN 101

Query: 139 FLWQSFDYP 147
            +W +    
Sbjct: 102 AIWATHTNV 110

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 70.9 bits (173), Expect = 4e-14
 Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 11/99 (11%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGM---------EEFENEVLL 553
           EN+  K  LG G    V + +     +E A K +  + G            E    EV +
Sbjct: 3   ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 62

Query: 554 IAKLQ-HRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           + K+  H N+++L           L+++ +    L D++
Sbjct: 63  LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL 101

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.6 bits (164), Expect = 6e-13
 Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 9/99 (9%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE------GQEIAAKRLSKSSGQG--MEEFENEVLLIA 555
           +       LG G FG V +            + +A K L + +             +LI 
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72

Query: 556 KLQHRNLVKLIGCCTQRDER-MLIYEYLPNKSLNDFIFG 593
              H N+V L+G CT+     M+I E+    +L+ ++  
Sbjct: 73  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 111

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.8 bits (162), Expect = 1e-12
 Identities = 19/116 (16%), Positives = 40/116 (34%), Gaps = 3/116 (2%)

Query: 503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQH 559
            E + + + +G G +G V      + G  +A K+LS+   S    +    E+ L+  ++H
Sbjct: 17  PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76

Query: 560 RNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFFFSFENLSLVD 615
            N++ L+   T         +      L       +            F    ++ 
Sbjct: 77  ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 132

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 66.0 bits (160), Expect = 2e-12
 Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 511 KLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
           K+G G FG +Y G  I  G+E+A K     +     +   E  +   +Q    +  I  C
Sbjct: 14  KIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWC 71

Query: 570 TQRDERMLIYEYLPNKSLNDF 590
               +  ++   L   SL D 
Sbjct: 72  GAEGDYNVMVMELLGPSLEDL 92

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.7 bits (159), Expect = 2e-12
 Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 3/106 (2%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG--QGMEEFENEVLLIAKLQHR 560
           + +    K+GEG +G V+K    E  + +A KR+               E+ L+ +L+H+
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61

Query: 561 NLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFFF 606
           N+V+L        +  L++E+        F       +      F 
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFL 107

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.4 bits (161), Expect = 2e-12
 Identities = 17/81 (20%), Positives = 35/81 (43%), Gaps = 3/81 (3%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHR 560
             + D   +G G +G V   V    G ++A K+L +   S    +    E+ L+  ++H 
Sbjct: 18  AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE 77

Query: 561 NLVKLIGCCTQRDERMLIYEY 581
           N++ L+   T  +      ++
Sbjct: 78  NVIGLLDVFTPDETLDDFTDF 98

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.1 bits (158), Expect = 3e-12
 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 9/86 (10%)

Query: 511 KLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEE------FENEVLLIAKLQ--HRN 561
            LG GGFG VY G+ +     +A K + K       E         EV+L+ K+      
Sbjct: 11  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70

Query: 562 LVKLIGCCTQRDERMLIYEYLPNKSL 587
           +++L+    + D  +LI E       
Sbjct: 71  VIRLLDWFERPDSFVLILERPEPVQD 96

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (160), Expect = 3e-12
 Identities = 22/107 (20%), Positives = 35/107 (32%), Gaps = 5/107 (4%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQH 559
            +F     LG+G FG V        G+  A K L K    +   +     E  ++   +H
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64

Query: 560 RNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF-GFLYTEHFFWSFF 605
             L  L       D    + EY     L   +    ++TE     + 
Sbjct: 65  PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG 111

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.3 bits (158), Expect = 4e-12
 Identities = 23/114 (20%), Positives = 47/114 (41%), Gaps = 17/114 (14%)

Query: 489 MELPIFDWMAIANATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQG--ME 545
           +E P  D +        +    K+G+G FG V+K    + GQ++A K++   + +     
Sbjct: 1   VECPFCDEV------SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPI 54

Query: 546 EFENEVLLIAKLQHRNLVKLIGCCTQRDERM--------LIYEYLPNKSLNDFI 591
               E+ ++  L+H N+V LI  C  +            L++++  +       
Sbjct: 55  TALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS 108

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 65.2 bits (158), Expect = 4e-12
 Identities = 17/105 (16%), Positives = 43/105 (40%), Gaps = 7/105 (6%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQ-HRN 561
           +++    KLG G +  V++ + I   +++  K L        ++ + E+ ++  L+   N
Sbjct: 35  DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPN 91

Query: 562 LVKLIGCCTQRDERM--LIYEYLPNKSLNDFIFGFLYTEHFFWSF 604
           ++ L         R   L++E++ N             +  F+ +
Sbjct: 92  IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMY 136

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 60.8 bits (147), Expect = 5e-12
 Identities = 22/139 (15%), Positives = 42/139 (30%), Gaps = 24/139 (17%)

Query: 8   LFYTIRTATARDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTV 67
           +F           L+  +S+     ++     +     +        L ++     N   
Sbjct: 4   IFSKQPDDNHPQILHATESL----EILFGTHVYRFIMQTDCN-----LVLY----DNNNP 50

Query: 68  IWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLV 127
           IW  N             +   G    V++ + N  VW S  +  A + V VL    N+V
Sbjct: 51  IWATNTGGL--GNGCRAVLQPDGVL--VVITNENVTVWQSPVAGKAGHYVLVLQPDRNVV 106

Query: 128 VKDGKDIDPDNFLWQSFDY 146
           +         + LW +   
Sbjct: 107 IY-------GDALWATQTV 118

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.3 bits (156), Expect = 8e-12
 Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 11/86 (12%)

Query: 512 LGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCC 569
           LG G  G V +       ++ A K L         +   EV L  +  Q  ++V+++   
Sbjct: 20  LGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVY 74

Query: 570 ----TQRDERMLIYEYLPNKSLNDFI 591
                 R   +++ E L    L   I
Sbjct: 75  ENLYAGRKCLLIVMECLDGGELFSRI 100

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.6 bits (151), Expect = 3e-11
 Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 10/112 (8%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE----GQEIAAKRLSKSS----GQGMEEFENEVLLIA 555
           ENF     LG G +G V+    I     G+  A K L K++     +  E    E  ++ 
Sbjct: 24  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83

Query: 556 KLQHR-NLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF-GFLYTEHFFWSFF 605
            ++    LV L        +  LI +Y+    L   +     +TEH    + 
Sbjct: 84  HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYV 135

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 61.0 bits (147), Expect = 8e-11
 Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 3/89 (3%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNL 562
            ++    ++GEG FG +++G  +   Q++A K   + S     +  +E      L     
Sbjct: 5   VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTG 62

Query: 563 VKLIGCCTQRDERMLIYEYLPNKSLNDFI 591
           +  +    Q     ++   L   SL D +
Sbjct: 63  IPNVYYFGQEGLHNVLVIDLLGPSLEDLL 91

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.0 bits (147), Expect = 9e-11
 Identities = 23/102 (22%), Positives = 46/102 (45%), Gaps = 7/102 (6%)

Query: 502 ATENFSDKNKLGEGGFGPVYKGVLIE--GQEIAAKRLSKSSGQGM--EEFENEVLLIAKL 557
           A + +    ++GEG +G V+K   ++  G+ +A KR+   +G+         EV ++  L
Sbjct: 5   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64

Query: 558 ---QHRNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLY 596
              +H N+V+L   CT           L  + ++  +  +L 
Sbjct: 65  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLD 106

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.6 bits (146), Expect = 2e-10
 Identities = 22/93 (23%), Positives = 33/93 (35%), Gaps = 4/93 (4%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQH 559
           + F     LG G FG V      E G   A K L K      + +E   NE  ++  +  
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100

Query: 560 RNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIF 592
             LVKL           ++ EY+    +   + 
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.3 bits (145), Expect = 2e-10
 Identities = 16/100 (16%), Positives = 38/100 (38%), Gaps = 9/100 (9%)

Query: 504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHR 560
           + + +   +G G  G V         + +A K+LS+   +    +    E++L+  + H+
Sbjct: 17  KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76

Query: 561 NLVKLIGCCTQRD------ERMLIYEYLPNKSLNDFIFGF 594
           N++ L+   T +       +  L+ E +            
Sbjct: 77  NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL 116

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 54.6 bits (131), Expect = 7e-10
 Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 8/88 (9%)

Query: 57  IWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNP 116
           I +     G+     +    L   S    + S  N  LVL +S +  VW+SN +      
Sbjct: 3   ILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCN--LVLFDS-DVRVWASNTAGA-TGC 58

Query: 117 VAVLLESGNLVVKDGKDIDPDNFLWQSF 144
            AVL   G LV+   +    +   W S 
Sbjct: 59  RAVLQSDGLLVILTAQ----NTIRWSSG 82

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.5 bits (140), Expect = 8e-10
 Identities = 16/101 (15%), Positives = 35/101 (34%), Gaps = 2/101 (1%)

Query: 511 KLGEGGFGPVYKGV-LIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCC 569
           KLG G F  V+    ++    +A K +        E  E+E+ L+ ++   +  K     
Sbjct: 20  KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY-TEAAEDEIKLLQRVNDADNTKEDSMG 78

Query: 570 TQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFFFSFEN 610
                ++L +      +    +  F        +    +E+
Sbjct: 79  ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEH 119

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 52.1 bits (124), Expect = 3e-08
 Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 14/86 (16%)

Query: 510 NKLGEGGFGPVYKGVLIEGQEIAAK--RLSKSSGQ--------GMEEFENEVLLIAKLQH 559
             +GEG    V+     +  E   K  ++  +S +        G   F    +  A+ + 
Sbjct: 6   KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65

Query: 560 RNLVKLIGCCTQR----DERMLIYEY 581
           R L KL G    +    +   ++ E 
Sbjct: 66  RALQKLQGLAVPKVYAWEGNAVLMEL 91

>d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 112

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Purple acid phosphatase, N-terminal domain
family: Purple acid phosphatase, N-terminal domain
domain: Purple acid phosphatase, N-terminal domain
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score = 35.3 bits (81), Expect = 0.004
 Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 4/74 (5%)

Query: 171 SWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGSWNG--LHWTGMPQLQPNPVYT 228
           SW + D+P      Y  + +G  +    KG    YR  +++   +H T + +L+ N  Y 
Sbjct: 37  SWVTMDEPGSSAVRYWSEKNGRKRIA--KGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYY 94

Query: 229 FEYVSNENEVFYRF 242
           +E         + F
Sbjct: 95  YEVGLRNTTRRFSF 108

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	617
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	99.83
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	99.81
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	99.8
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.73
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.72
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.7
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.69
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.68
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.67
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.67
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.66
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	99.66
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.66
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.66
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.65
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.65
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.65
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.65
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.64
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.64
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.64
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.63
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.63
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.62
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.62
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.62
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.62
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.61
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.61
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.61
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.6
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.6
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.6
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.59
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.59
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.58
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.57
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.57
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.56
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.56
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.56
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.55
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.54
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.54
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.53
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.52
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.52
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	99.52
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	99.51
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.51
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.5
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.49
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.48
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.46
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.44
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.4
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.39
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.38
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.38
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.38
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.37
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.36
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.36
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.33
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.31
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.3
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	99.25
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.24
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	98.94
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.88
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	98.84
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.82
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	98.75
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	98.69
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	98.43
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	93.74
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	93.29
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	92.82
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	91.79
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	91.57
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	89.79
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	89.55
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	89.48
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	89.47
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	88.6
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	88.54
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	87.37
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	87.19
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	87.17
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	85.83
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	85.81
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	85.56
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	85.47
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	84.2
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	84.16
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	81.53
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	80.62

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=99.83  E-value=1.6e-20  Score=160.17  Aligned_cols=112  Identities=23%  Similarity=0.468  Sum_probs=94.2

Q ss_pred             cccccCCCcccCCCEEEeCCCeEEEEeeCCCCCCCcEEEEEecccCCCcEEEEcCCCCCCCCCCceEEEeecCCceEEEe
Q 007129           18 RDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLL   97 (617)
Q Consensus        18 ~~~l~~g~~l~~~~~lvS~~g~F~~GF~~~~~~~~~~lgIw~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~~~L~l~   97 (617)
                      +|+|.+||.|..|++|+|  |.|+|.|...|+     |.|+.    ..++||.||++.|..  ++.|.|+.||+  |+|+
T Consensus         1 tDtL~~gq~L~~g~~l~~--g~~~l~~q~DGN-----Lvly~----~~~~vW~s~~~~~~~--~~~l~l~~dGn--Lvl~   65 (112)
T d1xd5a_           1 SDRLNSGHQLDTGGSLAE--GGYLFIIQNDCN-----LVLYD----NNRAVWASGTNGKAS--GCVLKMQNDGN--LVIY   65 (112)
T ss_dssp             CCEEETTEEECTTCEEEE--TTEEEEECTTSC-----EEEEE----TTEEEEECCCTTSCS--SEEEEECTTSC--EEEE
T ss_pred             CCEecCCCEecCCCEEEE--CCEEEEEcCCCC-----EEEEc----CCcEEEEccCccCCC--CcEEEEecccc--EEEE
Confidence            589999999999999985  999999998876     34443    468999999998843  46899999999  9999


Q ss_pred             cCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecCCCcc
Q 007129           98 NSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSH  149 (617)
Q Consensus        98 d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~PtD  149 (617)
                      |. +..+|++++.......+|+|+|+|||||++..    +.++|||+.+|+|
T Consensus        66 ~~-~~~~w~s~t~~~~~~~~l~L~ddGNlvly~~~----~~~~W~S~t~~~n  112 (112)
T d1xd5a_          66 SG-SRAIWASNTNRQNGNYYLILQRDRNVVIYDNS----NNAIWATHTNVGN  112 (112)
T ss_dssp             ET-TEEEEECCCCCSCCCCEEEECTTSCEEEECTT----SCEEEECCCCCCC
T ss_pred             ec-CCeEEEEeeccCCCceEEEEcCCCCEEEECCC----CcEEecCCCccCC
Confidence            97 56788888765556678999999999999863    6789999999985

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.81  E-value=1.1e-19  Score=153.48  Aligned_cols=108  Identities=26%  Similarity=0.459  Sum_probs=90.9

Q ss_pred             cccccCCCcccCCCEEEeCCCeEEEEeeCCCCCCCcEEEEEecccCCCcEEEEcCCCCCCCCCCceEEEeecCCceEEEe
Q 007129           18 RDTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLL   97 (617)
Q Consensus        18 ~~~l~~g~~l~~~~~lvS~~g~F~~GF~~~~~~~~~~lgIw~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~~~L~l~   97 (617)
                      .|+|.+|+.|..|++|+  +|.|.|+|...++     |.+ |.   ..++||+||++.|... .+.|.|+.||+  |+|.
T Consensus         1 ~~~L~~g~~L~~g~~l~--~g~~~l~~q~dgn-----Lvl-~~---~~~~vW~ant~~~~~~-~~~l~l~~dGn--Lvl~   66 (109)
T d1kj1a_           1 RNLLTNGEGLYAGQSLD--VEPYHFIMQEDCN-----LVL-YD---HSTSVWASNTGILGKK-GCKAVLQSDGN--FVVY   66 (109)
T ss_dssp             CCEEETTCEEETTCEEE--ETTEEEEECTTSC-----EEE-EE---TTEEEEECCCCCTTCC-CCEEEECTTSC--EEEE
T ss_pred             CCCccCCCEEeCCCEEE--eCCEEEEecCCCe-----EEE-Ee---CCEEEEEeCCCCCCce-eEEEEEcCCce--EEEE
Confidence            37899999999999997  4889999987765     233 33   4589999999999764 47899999999  9999


Q ss_pred             cCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecCC
Q 007129           98 NSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDY  146 (617)
Q Consensus        98 d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~  146 (617)
                      |++|.++|+|++..+....+|+|+|+|||||++.       .+|||+-|
T Consensus        67 ~~~g~~vW~s~t~~~~~~~~l~L~ddGNlvly~~-------~~W~S~t~  108 (109)
T d1kj1a_          67 DAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYGS-------DIWSTGTY  108 (109)
T ss_dssp             CSSSCEEEECCCCCCSSCCEEEECTTSCEEEECC-------EEEECCCC
T ss_pred             eCCCcEEEEEeeECCCCCEEEEEeCCCcEEEECC-------CEecCCCc
Confidence            9999999999987555667899999999999963       49999865

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=99.80  E-value=1e-19  Score=153.66  Aligned_cols=106  Identities=27%  Similarity=0.398  Sum_probs=89.9

Q ss_pred             ccccCCCcccCCCEEEeCCCeEEEEeeCCCCCCCcEEEEEecccCCCcEEEEcCCCCCCCCCCceEEEeecCCceEEEec
Q 007129           19 DTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLN   98 (617)
Q Consensus        19 ~~l~~g~~l~~~~~lvS~~g~F~~GF~~~~~~~~~~lgIw~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~~~L~l~d   98 (617)
                      |+|.+|+.|..|++|.  +|.|+|.|...|+     |.|+.    ..++||.||++.|-  ....|.+..+|+  |+|.|
T Consensus         2 ~~L~~g~~L~~G~~l~--ng~~~l~~q~DGN-----Lvly~----~~~~vW~s~~~~~~--~~~~l~l~~~Gn--lvl~~   66 (108)
T d1jpca_           2 NILYSGETLSTGEFLN--YGSFVFIMQEDCN-----LVLYD----VDKPIWATNTGGLS--RSCFLSMQTDGN--LVVYN   66 (108)
T ss_dssp             CEEETTEEECTTCEEE--ETTEEEEECTTSC-----EEEEE----TTEEEEECCCTTSC--SSCEEEECTTSC--EEEEC
T ss_pred             CCccCCCEecCCCEEE--cCCEEEEECCCCe-----EEEEe----CCceeeEeCCCCCC--CccEEEEeccce--EEEEC
Confidence            6899999999999995  6999999999876     45554    45789999999884  346899999999  99999


Q ss_pred             CCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecCC
Q 007129           99 STNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDY  146 (617)
Q Consensus        99 ~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~  146 (617)
                      ++|.+||+|++.......+|+|+|+|||||++.       .+||||+|
T Consensus        67 ~~g~~vWsS~t~~~~~~~~l~L~ddGNlVly~~-------~~W~S~t~  107 (108)
T d1jpca_          67 PSNKPIWASNTGGQNGNYVCILQKDRNVVIYGT-------DRWATGTH  107 (108)
T ss_dssp             TTCCEEEECCCCCSCSCEEEEECTTSCEEEEEC-------CCCCCCCC
T ss_pred             CCccceEEccccCCCCcEEEEEcCCCCEEEeCC-------CcccCCCC
Confidence            999999999976444556789999999999964       28999988

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=3.2e-18  Score=169.20  Aligned_cols=111  Identities=24%  Similarity=0.403  Sum_probs=96.4

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      ++|...++||+|+||.||+|.+.+++.||||+++.. ....++|.+|+.++++++|||||+++|+|...+..++||||++
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~   83 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   83 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCC-cCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence            467777899999999999999988889999999753 3445789999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      +|+|.+++....  ..++|..                ...|+|+||||+|
T Consensus        84 ~g~L~~~l~~~~--~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~N  131 (263)
T d1sm2a_          84 HGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARN  131 (263)
T ss_dssp             TCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGG
T ss_pred             CCcHHHHhhccc--cCCCHHHHHHHHHHHHHHHHhhhccceeecccchhh
Confidence            999999998653  3456654                4467899999998

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.72  E-value=2.3e-18  Score=172.46  Aligned_cols=114  Identities=29%  Similarity=0.486  Sum_probs=97.4

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ..++|...++||+|+||.||+|.... ++.||||+++.. ....++|.+|+.++++++|||||+++|++.+.+..+||||
T Consensus        15 ~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E   93 (287)
T d1opja_          15 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE   93 (287)
T ss_dssp             CGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTT-CSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             cHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCc-cchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEee
Confidence            34567778899999999999999875 889999999753 3456789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCCHHHH----------------HhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFFWSFF----------------FSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~w~~r----------------~~i~~~~~~~~n  617 (617)
                      |+++|+|.++|.... ...++|..+                ..|+|+||||+|
T Consensus        94 ~~~~g~l~~~l~~~~-~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~N  145 (287)
T d1opja_          94 FMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARN  145 (287)
T ss_dssp             CCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             cccCcchHHHhhhcc-ccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCe
Confidence            999999999998653 335666543                468899999998

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.70  E-value=1.1e-17  Score=168.34  Aligned_cols=122  Identities=25%  Similarity=0.395  Sum_probs=97.9

Q ss_pred             cCHHHHHHhccC---------CCCcceecccCceeEEEEEEcC-C---cEEEEeecccC-chhhHHHHHHHHHHHHccCC
Q 007129          494 FDWMAIANATEN---------FSDKNKLGEGGFGPVYKGVLIE-G---QEIAAKRLSKS-SGQGMEEFENEVLLIAKLQH  559 (617)
Q Consensus       494 ~~~~~l~~at~~---------f~~~~~lG~G~fG~Vykg~l~~-g---~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H  559 (617)
                      ++|+++..++.+         |...++||+|+||.||+|.... +   ..||||.+... .....++|.+|+.++++++|
T Consensus         7 ~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H   86 (299)
T d1jpaa_           7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH   86 (299)
T ss_dssp             GGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCC
T ss_pred             CCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC
Confidence            445555555444         3445789999999999999854 3   25899998653 44556789999999999999


Q ss_pred             CcccceEEEEEeCCeEEEEEeccCCCCHHHHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          560 RNLVKLIGCCTQRDERMLIYEYLPNKSLNDFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       560 ~nlv~l~g~~~~~~~~~lv~E~~~~GsL~~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      ||||+++|++...+..++||||+++|+|.+++....  ..++|.+++                .|+|+||||+|
T Consensus        87 pnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~--~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~N  158 (299)
T d1jpaa_          87 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARN  158 (299)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             CCCccEEEEEeeCCEEEEEEEecCCCcceeeecccc--CCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccce
Confidence            999999999999999999999999999999997643  347777555                56889999998

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=3.1e-17  Score=161.37  Aligned_cols=111  Identities=27%  Similarity=0.437  Sum_probs=96.3

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      ++|+..++||+|+||.||+|++++++.||||.++.. ....++|.+|+.++++++|||||+++|+|.+.+..++||||++
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~-~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~   82 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA   82 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESS-SSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcC-cCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence            678888999999999999999988889999999754 3445789999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhcCCCCCcCCHHHH----------------HhhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFFWSFF----------------FSFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~w~~r----------------~~i~~~~~~~~n  617 (617)
                      +|+|.+++....  ..++|..+                ..|+|+||||+|
T Consensus        83 ~g~l~~~~~~~~--~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~N  130 (258)
T d1k2pa_          83 NGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN  130 (258)
T ss_dssp             TEEHHHHHHSGG--GCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGG
T ss_pred             CCcHHHhhhccc--cCCcHHHHHHHHHHHHHHHHHHhhcCccccccccee
Confidence            999999987653  23555544                467899999988

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.6e-17  Score=164.82  Aligned_cols=111  Identities=29%  Similarity=0.406  Sum_probs=93.0

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      ++|...++||+|+||.||+|.+++++.||||+++.. ....++|.+|+.++.+++|||||+++|++.+ +..+|||||++
T Consensus        13 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~~   90 (272)
T d1qpca_          13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYME   90 (272)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred             HHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccC-cCCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeCC
Confidence            567777899999999999999988889999999753 3445789999999999999999999998854 56789999999


Q ss_pred             CCCHHHHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      +|+|.+++.... ...++|..++                .|+|+||||+|
T Consensus        91 ~g~L~~~~~~~~-~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~N  139 (272)
T d1qpca_          91 NGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN  139 (272)
T ss_dssp             TCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             CCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhh
Confidence            999999886543 2346776554                66799999998

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.5e-17  Score=166.29  Aligned_cols=112  Identities=21%  Similarity=0.294  Sum_probs=96.7

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      +.|...++||+|+||.||++.... ++.||||+++.......+.|.+|+.++++++|||||++++++...+..+|||||+
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            346777899999999999999865 8899999998766667788999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCH----------------HHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      ++|+|.+++.....  .+++                .+...|+|+||||+|
T Consensus        92 ~~g~L~~~~~~~~~--~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~N  140 (288)
T d2jfla1          92 AGGAVDAVMLELER--PLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGN  140 (288)
T ss_dssp             TTEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             CCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhh
Confidence            99999999875321  2333                466689999999998

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=4.5e-17  Score=163.18  Aligned_cols=114  Identities=22%  Similarity=0.352  Sum_probs=97.6

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      +.|...++||+|+||.||++.... |+.||||+++.......+.+.+|+.++++++|||||++++++...+..+|||||+
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            458888999999999999998754 8999999997655555678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++|+|.+++......            ..|..-+...|+|+||||+|
T Consensus       100 ~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~N  146 (293)
T d1yhwa1         100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN  146 (293)
T ss_dssp             TTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             CCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHH
Confidence            999999998764321            12444577789999999998

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.66  E-value=5.3e-17  Score=166.79  Aligned_cols=114  Identities=22%  Similarity=0.326  Sum_probs=97.8

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      ++|...++||+|+||.||++.... |+.||||++........+.+.+|+.++.+++|||||++++++.+.+..+|||||+
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  105 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  105 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            467888899999999999999864 8999999997665666678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++|+|.++|.+....              ..|...+...|+|+||||+|
T Consensus       106 ~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~N  154 (350)
T d1koaa2         106 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPEN  154 (350)
T ss_dssp             CSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             CCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhH
Confidence            999999999754321              11344467789999999998

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.66  E-value=5.9e-17  Score=138.82  Aligned_cols=103  Identities=23%  Similarity=0.344  Sum_probs=85.7

Q ss_pred             EEEecccCCCcEEEEcCCCCCCCCCCceEEEeecCCceEEEecCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCC
Q 007129           56 GIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDID  135 (617)
Q Consensus        56 gIw~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~~~L~l~d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~  135 (617)
                      -|||.++++++.+|++|++.|+....-+|.+..|||  |+|.+. +.++|++++........+.|+|+|||||+|.+   
T Consensus        11 ~il~~~~~~~~~~~~l~~~q~l~~g~y~L~~q~DGN--LvL~~~-~~~vW~s~t~~~~~~~~~~l~~~GnLvl~d~~---   84 (120)
T d1dlpa2          11 SILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCN--LVLFDR-DDRVWSTNTAGKGTGCRAVLQPNGRMDVLTNQ---   84 (120)
T ss_dssp             EECCCC--CCCCCCEECSSCCCBCSSCEEEEETTTE--EEEEBT-TBCCSCCCCCSSCSSCEEEEETTTEEEEEETT---
T ss_pred             eEEEcCCCCCCcccEEcCCCeeEcCCEEEEEcCCCc--EEEecC-CcEEEEEccccCCCcEEEEEeCCeeEEEEcCC---
Confidence            489999999999999999999987777899999999  999986 66899999875445678999999999999864   


Q ss_pred             CCcceEeecCCCcccccCCceeeeeeecCceeEEEEcccCCCCCCeeeEEEeCCCCCcEEE
Q 007129          136 PDNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAV  196 (617)
Q Consensus       136 ~~~~lWqSFd~PtDTlLpgq~L~~~~~tg~~~~l~Sw~s~~d~s~G~~~l~~~~~g~~~~~  196 (617)
                       +++||||+.                               +.++|.|.+.|+++|...++
T Consensus        85 -~~~lW~S~t-------------------------------~~~~~~~~l~Lq~DGnlvlY  113 (120)
T d1dlpa2          85 -NIAVWTSGN-------------------------------SRSAGRYVFVLQPDRNLAIY  113 (120)
T ss_dssp             -TEEEEECCC-------------------------------CCSSSCCEEEECSSSCEEEE
T ss_pred             -CCEEEEeCC-------------------------------CCCCCcEEEEECCCCcEEEe
Confidence             789999974                               23567889999999976553

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=3.7e-17  Score=161.92  Aligned_cols=114  Identities=22%  Similarity=0.254  Sum_probs=92.3

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ++|...++||+|+||.||++.... ++.||||+++... ....++|.+|+.++++++|||||++++++.+.+..+|||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            467778899999999999999864 8999999986432 23346799999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +++|+|.++|.....-             ..|..-+...|+|+||||.|
T Consensus        85 ~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~N  133 (271)
T d1nvra_          85 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN  133 (271)
T ss_dssp             CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             cCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHH
Confidence            9999999999754310             01233366789999999998

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=8.3e-17  Score=160.03  Aligned_cols=104  Identities=27%  Similarity=0.392  Sum_probs=85.2

Q ss_pred             ceecccCceeEEEEEEcC---CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccCC
Q 007129          510 NKLGEGGFGPVYKGVLIE---GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLPN  584 (617)
Q Consensus       510 ~~lG~G~fG~Vykg~l~~---g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~~  584 (617)
                      ++||+|+||.||+|.+.+   ++.||||+++..  .....++|.+|+.++++++|||||+++|+|.. +..+|||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            479999999999998754   467999999643  23345789999999999999999999999854 567899999999


Q ss_pred             CCHHHHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          585 KSLNDFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       585 GsL~~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      |+|.+++....   .++|..++                .|+|+||||+|
T Consensus        92 g~L~~~l~~~~---~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~N  137 (277)
T d1xbba_          92 GPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARN  137 (277)
T ss_dssp             EEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             CcHHHHHhhcc---CCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchh
Confidence            99999998653   36666444                57899999998

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=2.6e-17  Score=167.49  Aligned_cols=115  Identities=16%  Similarity=0.151  Sum_probs=96.2

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      .++|...++||+|+||.||++.... |+.||+|+++.. .....+++.+|+.++++++|||||++++++.+..+.+||||
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE   84 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   84 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            4678888999999999999999864 889999999754 33445789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCC-C------------CcCCHHH-HHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLY-T------------EHFFWSF-FFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~-~------------~~l~w~~-r~~i~~~~~~~~n  617 (617)
                      |+++|+|.++|.+... .            ..|.+-+ +..|+||||||.|
T Consensus        85 y~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~N  135 (322)
T d1s9ja_          85 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSN  135 (322)
T ss_dssp             CCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGG
T ss_pred             cCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHH
Confidence            9999999999976432 0            0133334 5579999999998

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=9.2e-17  Score=159.57  Aligned_cols=110  Identities=25%  Similarity=0.375  Sum_probs=91.7

Q ss_pred             ccCCCCcceecccCceeEEEEEEcCCcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      .++|...++||+|+||.||+|.+.  ..||||+++..  .....++|.+|+.++.+++|||||+++|++.+ +..+||||
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~E   83 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQ   83 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEe
Confidence            356788899999999999999864  36999998643  44566899999999999999999999999854 56799999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |+++|+|.++|....  ..++|.                +...|+|+||||+|
T Consensus        84 y~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~N  134 (276)
T d1uwha_          84 WCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN  134 (276)
T ss_dssp             CCCEEEHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             cCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHH
Confidence            999999999997643  235665                44578999999998

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.3e-16  Score=159.14  Aligned_cols=111  Identities=30%  Similarity=0.445  Sum_probs=89.3

Q ss_pred             cCCCCcc-eecccCceeEEEEEEcC---CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          504 ENFSDKN-KLGEGGFGPVYKGVLIE---GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       504 ~~f~~~~-~lG~G~fG~Vykg~l~~---g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      +++...+ +||+|+||.||+|.+..   +..||||.++.. .....++|.+|+.++.+++|||||+++|++.. +..+||
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lv   86 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV   86 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEE
Confidence            3444445 59999999999998753   457999999754 34456789999999999999999999999864 568999


Q ss_pred             EeccCCCCHHHHHhcCCCCCcCCHHHH----------------HhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYTEHFFWSFF----------------FSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~~~l~w~~r----------------~~i~~~~~~~~n  617 (617)
                      |||+++|+|.+++...+  ..++|..+                ..|+|+||||+|
T Consensus        87 mE~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~N  139 (285)
T d1u59a_          87 MEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARN  139 (285)
T ss_dssp             EECCTTEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             EEeCCCCcHHHHhhccc--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhh
Confidence            99999999999987643  34666544                467899999998

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=6.6e-17  Score=161.31  Aligned_cols=111  Identities=27%  Similarity=0.400  Sum_probs=94.7

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEeccC
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYLP  583 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~~  583 (617)
                      ++|...++||+|+||.||+|..++++.||||+++.. ....++|.+|+.++.+++|||||+++|+|. .++.++||||++
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~~   94 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS   94 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCCT
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcc-cCCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEecC
Confidence            567888899999999999999988888999999643 345578999999999999999999999985 456789999999


Q ss_pred             CCCHHHHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          584 NKSLNDFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       584 ~GsL~~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      +|+|..++.... ...++|.+++                .|+|+||||+|
T Consensus        95 ~g~l~~~~~~~~-~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~N  143 (285)
T d1fmka3          95 KGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN  143 (285)
T ss_dssp             TCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             CCchhhhhhhcc-cccchHHHHHHHHHHHHHHHHHHhhhheecccccceE
Confidence            999999998643 3357887654                68899999988

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1.8e-16  Score=158.99  Aligned_cols=114  Identities=25%  Similarity=0.386  Sum_probs=94.7

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc------hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS------GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERM  576 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~------~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~  576 (617)
                      +.|...++||+|+||.||++.... |+.||||+++...      ....+.|.+|+.++++++|||||++++++.+.+..+
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            457788899999999999999854 8999999986421      123578999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |||||+++|+|.++|..... .            ..|.+-+...|+|+||||+|
T Consensus        90 iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~N  143 (293)
T d1jksa_          90 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPEN  143 (293)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             EEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccce
Confidence            99999999999999976431 0            11333366789999999998

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=9e-17  Score=159.03  Aligned_cols=114  Identities=19%  Similarity=0.205  Sum_probs=85.7

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEe--CCeEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ--RDERMLI  578 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~--~~~~~lv  578 (617)
                      ++|...+.||+|+||.||++.... |+.||||.++..  .....+.|.+|+.++.+++|||||++++++.+  ....+||
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            567788999999999999999864 899999998643  34445789999999999999999999999865  4557899


Q ss_pred             EeccCCCCHHHHHhcCCC-CCcCCHHH----------------HH-----hhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLY-TEHFFWSF----------------FF-----SFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~-~~~l~w~~----------------r~-----~i~~~~~~~~n  617 (617)
                      |||+++|+|.++|....+ ...+++..                ..     .|+|+||||+|
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~N  144 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN  144 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGG
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhh
Confidence            999999999999964321 22344442                22     29999999998

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1.6e-16  Score=156.61  Aligned_cols=114  Identities=23%  Similarity=0.282  Sum_probs=95.3

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...+.||+|+||.||++.... ++.||+|.+.+.   .....+.+.+|+.++++++|||||++++++.+.+..+|||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            457778899999999999999865 889999998642   2234568999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.++|..... .            ..|...+...|+|+||||.|
T Consensus        86 Ey~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~N  136 (263)
T d2j4za1          86 EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN  136 (263)
T ss_dssp             ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             eecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeecccc
Confidence            99999999999975431 1            11444466789999999998

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.63  E-value=1.7e-16  Score=163.14  Aligned_cols=114  Identities=25%  Similarity=0.324  Sum_probs=97.2

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      +.|...++||+|+||.||++... .|+.||||.++.......+.+.+|+.++++++|||||++++++.+....+|||||+
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  108 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  108 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            46788899999999999999975 48999999997665555678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++|+|.+++......              ..|...+...|+|+||||.|
T Consensus       109 ~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~N  157 (352)
T d1koba_         109 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPEN  157 (352)
T ss_dssp             CCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             CCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccccccc
Confidence            999999988654321              11344477789999999998

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.63  E-value=1.8e-16  Score=159.62  Aligned_cols=121  Identities=25%  Similarity=0.436  Sum_probs=99.9

Q ss_pred             HHHHHhccCCCCcceecccCceeEEEEEEc------CCcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEE
Q 007129          497 MAIANATENFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCC  569 (617)
Q Consensus       497 ~~l~~at~~f~~~~~lG~G~fG~Vykg~l~------~g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~  569 (617)
                      .+++...++|...++||+|+||.||+|...      +++.||||+++... ....++|.+|+.++++++|||+++++++|
T Consensus         6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~   85 (301)
T d1lufa_           6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC   85 (301)
T ss_dssp             HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeee
Confidence            344446678999999999999999999874      24689999997543 34457899999999999999999999999


Q ss_pred             EeCCeEEEEEeccCCCCHHHHHhcCCC---------------------CCcCCHHHHH----------------hhhhcc
Q 007129          570 TQRDERMLIYEYLPNKSLNDFIFGFLY---------------------TEHFFWSFFF----------------SFENLS  612 (617)
Q Consensus       570 ~~~~~~~lv~E~~~~GsL~~~L~~~~~---------------------~~~l~w~~r~----------------~i~~~~  612 (617)
                      ......++++||+++|+|.++|+....                     ...|+|..++                .|+|+|
T Consensus        86 ~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrD  165 (301)
T d1lufa_          86 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD  165 (301)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeE
Confidence            999999999999999999999975321                     2347887777                445999


Q ss_pred             cccCC
Q 007129          613 LVDRN  617 (617)
Q Consensus       613 ~~~~n  617 (617)
                      |||+|
T Consensus       166 lKp~N  170 (301)
T d1lufa_         166 LATRN  170 (301)
T ss_dssp             CSGGG
T ss_pred             Ecccc
Confidence            99998

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=3e-16  Score=156.55  Aligned_cols=112  Identities=26%  Similarity=0.433  Sum_probs=93.7

Q ss_pred             cCCCCcceecccCceeEEEEEEcCC-----cEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEG-----QEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g-----~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      +.|+..++||+|+||.||+|.+...     ..||||+++.. .....++|.+|+.++.+++|||||+++|++.+.+..++
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~   86 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI   86 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence            4567778999999999999998642     36999998643 34445689999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |+||+++|+|.+++....  ..++|.                +...|+|+||||+|
T Consensus        87 v~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~N  140 (283)
T d1mqba_          87 ITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARN  140 (283)
T ss_dssp             EEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             EEEecccCcchhhhhccc--ccccHHHHHHHHHHHHHhhhhccccccccCccccce
Confidence            999999999999887653  245665                44588899999998

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=3.7e-16  Score=158.65  Aligned_cols=113  Identities=19%  Similarity=0.292  Sum_probs=95.1

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      +.|...++||+|+||.||++.... ++.||||.++... .....+.+|+.++..++|||||++++++.+.+..+|||||+
T Consensus         5 ~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~   83 (321)
T d1tkia_           5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecC
Confidence            457778899999999999999865 8899999997543 33457899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++|+|.++|......              ..|..-+...|+|+||||.|
T Consensus        84 ~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~N  132 (321)
T d1tkia_          84 SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPEN  132 (321)
T ss_dssp             CCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccc
Confidence            999999999764311              11334467799999999998

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=8.3e-17  Score=158.61  Aligned_cols=110  Identities=25%  Similarity=0.368  Sum_probs=90.1

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeC-CeEEEEEecc
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR-DERMLIYEYL  582 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~-~~~~lv~E~~  582 (617)
                      ++|...++||+|+||.||+|.+ .|..||||+++..  ...++|.+|+.++++++|||||+++|+|.+. +..++||||+
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~   83 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   83 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred             HHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEecc
Confidence            4566778999999999999998 5789999999643  3457899999999999999999999999764 5579999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++|+|.++|+... ...++|.                +...|+|+||+|+|
T Consensus        84 ~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~N  133 (262)
T d1byga_          84 AKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARN  133 (262)
T ss_dssp             TTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             CCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHhhccccccCceeccccchHh
Confidence            9999999997642 2346666                44478899999987

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.62  E-value=3.6e-16  Score=157.73  Aligned_cols=110  Identities=23%  Similarity=0.329  Sum_probs=92.6

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      .|+..++||+|+||.||++.... ++.||||.++...   ....+.|.+|+.++.+++|||||++++++.+.+..+||||
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence            37778899999999999998754 8899999986432   2344679999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      |+++|+|..++....   .+++.                +...|+|+||||+|
T Consensus        96 ~~~~g~l~~~~~~~~---~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~N  145 (309)
T d1u5ra_          96 YCLGSASDLLEVHKK---PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGN  145 (309)
T ss_dssp             CCSEEHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGG
T ss_pred             ecCCCchHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcce
Confidence            999999987776543   24443                56688999999998

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=3.4e-16  Score=159.31  Aligned_cols=115  Identities=26%  Similarity=0.397  Sum_probs=92.0

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-C-----cEEEEeecccC-chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCe
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-G-----QEIAAKRLSKS-SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDE  574 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g-----~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~  574 (617)
                      .++|...++||+|+||.||+|.... +     ..||||.+... .......|.+|+.++.++ +|||||++++++...+.
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~  115 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  115 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe
Confidence            4678888999999999999998753 2     36999998643 334457899999999998 89999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcCCC--------------------CCcCCHHHHH----------------hhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLY--------------------TEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~--------------------~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      .+|||||+++|+|.++|+..+.                    ...|+|..++                .|+||||||+|
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~N  194 (325)
T d1rjba_         116 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN  194 (325)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGG
T ss_pred             EEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhc
Confidence            9999999999999999986532                    1236666444                68999999998

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.61  E-value=3.4e-16  Score=157.88  Aligned_cols=114  Identities=20%  Similarity=0.236  Sum_probs=90.3

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      +.|...++||+|+||.||++.... ++.||||.+.... ....+.|.+|+.++++++|||||++++++.+.+..+|||||
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~   88 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQL   88 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            457778899999999999999864 8899999997433 23346788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +++|+|.++|.....-             ..|...+...|+|+||||.|
T Consensus        89 ~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~N  137 (307)
T d1a06a_          89 VSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPEN  137 (307)
T ss_dssp             CCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             cCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccc
Confidence            9999999999764310             01233366689999999998

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=2.6e-16  Score=157.19  Aligned_cols=114  Identities=22%  Similarity=0.201  Sum_probs=95.9

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...+.||+|+||.||++.... ++.||||.+...   .....+.+.+|+.++++++|||||++++++.+.+..++||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            457788999999999999999854 899999998642   2334578999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|.+++..... .            ..|...+...|+|+||||.|
T Consensus        88 Ey~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~N  138 (288)
T d1uu3a_          88 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN  138 (288)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             EccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccc
Confidence            99999999999876432 1            12445577789999999998

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=5.8e-16  Score=156.43  Aligned_cols=114  Identities=29%  Similarity=0.497  Sum_probs=92.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-Cc--EEEEeecccC-chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCeEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQ--EIAAKRLSKS-SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~--~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      ++|...++||+|+||.||+|.+.+ +.  .||||+++.. .....++|.+|+.++.++ +|||||+++|+|.+.+..++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            567778899999999999999865 43  5788988643 334557899999999998 799999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCC-------------CCCcCCHHHHH----------------hhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFL-------------YTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~-------------~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      +||+++|+|.++|+...             ....|+|.++.                .|+|+||||+|
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~N  157 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARN  157 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccce
Confidence            99999999999998642             13457777554                56788999988

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=6.2e-16  Score=152.96  Aligned_cols=108  Identities=22%  Similarity=0.311  Sum_probs=87.9

Q ss_pred             CCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEe----CCeEEEEE
Q 007129          507 SDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ----RDERMLIY  579 (617)
Q Consensus       507 ~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~----~~~~~lv~  579 (617)
                      ...++||+|+||.||++.... ++.||+|.+...  .....+.|.+|+.++++++|||||++++++..    ....+|||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            344689999999999999865 889999998643  34456789999999999999999999999865    34578999


Q ss_pred             eccCCCCHHHHHhcCCCCCcCCHH----------------HHHh--hhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTEHFFWS----------------FFFS--FENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~--i~~~~~~~~n  617 (617)
                      ||+++|+|.++|....   .+++.                +...  |+|+||||.|
T Consensus        92 E~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~N  144 (270)
T d1t4ha_          92 ELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDN  144 (270)
T ss_dssp             ECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGG
T ss_pred             eCCCCCcHHHHHhccc---cccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhh
Confidence            9999999999997643   23433                3334  9999999998

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.60  E-value=9e-16  Score=152.35  Aligned_cols=111  Identities=21%  Similarity=0.260  Sum_probs=93.2

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCch---------hhHHHHHHHHHHHHccC-CCcccceEEEEEeC
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSG---------QGMEEFENEVLLIAKLQ-HRNLVKLIGCCTQR  572 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~---------~~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~~  572 (617)
                      ++|...++||+|+||+||++... +++.||||+++....         ...+.+.+|+.++++++ |||||++++++.+.
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            46777899999999999999875 488999999864321         12346899999999997 99999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          573 DERMLIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       573 ~~~~lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +..+|||||+++|+|.++|....   .+++.                +...|+|+||||+|
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~N  140 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALHKLNIVHRDLKPEN  140 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             cceEEEEEcCCCchHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHcCCcccccccce
Confidence            99999999999999999997543   23443                66689999999998

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=6.1e-16  Score=157.88  Aligned_cols=115  Identities=18%  Similarity=0.115  Sum_probs=98.0

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      .++|...++||+|+||.||++.... ++.||||++++.   .....+.+.+|+.++++++|||||++++++.+....++|
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv   83 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence            3568888999999999999999854 899999999643   233457899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |||+++|+|.+++.....-             ..|...++..|+||||||.|
T Consensus        84 ~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~N  135 (337)
T d1o6la_          84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLEN  135 (337)
T ss_dssp             EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG
T ss_pred             eeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHH
Confidence            9999999999999865321             12455588899999999998

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=8.5e-16  Score=154.68  Aligned_cols=105  Identities=22%  Similarity=0.400  Sum_probs=84.0

Q ss_pred             CCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHH--HHHHHHccCCCcccceEEEEEeCC----eEEEE
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFEN--EVLLIAKLQHRNLVKLIGCCTQRD----ERMLI  578 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~--Ev~~l~~l~H~nlv~l~g~~~~~~----~~~lv  578 (617)
                      ++...++||+|+||.||+|++ +|+.||||+++..   ..+++.+  |+..+.+++|||||+++|+|....    ..++|
T Consensus         4 ~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~---~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv   79 (303)
T d1vjya_           4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc---chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEE
Confidence            455667999999999999997 6889999998643   2334444  455556789999999999998754    57899


Q ss_pred             EeccCCCCHHHHHhcCCCCCcCCHHHHH------------------------hhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYTEHFFWSFFF------------------------SFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~~~l~w~~r~------------------------~i~~~~~~~~n  617 (617)
                      ||||++|+|.++|.+.    .++|..|+                        .|+|+||||+|
T Consensus        80 ~Ey~~~g~L~~~l~~~----~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~N  138 (303)
T d1vjya_          80 SDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN  138 (303)
T ss_dssp             EECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGG
T ss_pred             EecccCCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccc
Confidence            9999999999999764    37777654                        57899999998

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2.1e-15  Score=152.34  Aligned_cols=107  Identities=24%  Similarity=0.452  Sum_probs=88.1

Q ss_pred             cceecccCceeEEEEEEcCC----cEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeC-CeEEEEEecc
Q 007129          509 KNKLGEGGFGPVYKGVLIEG----QEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR-DERMLIYEYL  582 (617)
Q Consensus       509 ~~~lG~G~fG~Vykg~l~~g----~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~-~~~~lv~E~~  582 (617)
                      .++||+|+||+||+|.+.+.    ..||||+++.. .....++|.+|+.++++++|||||+++|+|.+. ...++||||+
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            36899999999999998542    25899999743 445568899999999999999999999998864 5889999999


Q ss_pred             CCCCHHHHHhcCCCCCcCCHHHHH----------------hhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLYTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      ++|+|.+++.....  .++|..++                .|+|+||||+|
T Consensus       112 ~~g~l~~~~~~~~~--~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~N  160 (311)
T d1r0pa_         112 KHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARN  160 (311)
T ss_dssp             TTCBHHHHHHCTTC--CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             ecCchhhhhccccc--cchHHHHHHHHHHHHHhhhhhcccCcccCCccHHh
Confidence            99999999986542  34555443                67899999998

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.57  E-value=8.4e-16  Score=155.55  Aligned_cols=114  Identities=19%  Similarity=0.234  Sum_probs=96.0

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...++||+|+||.||++.... |+.||||+++..   .....+.+.+|+.+++.++|||||++++++.+.+..++||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            467778999999999999999854 899999998642   2234578999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCCCC-------------cCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYTE-------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~~-------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++|+|..++.......             .|...++..|+|+||||.|
T Consensus        84 E~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~N  134 (316)
T d1fota_          84 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPEN  134 (316)
T ss_dssp             CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGG
T ss_pred             eecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchh
Confidence            9999999999987654211             1344467799999999998

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.57  E-value=1.8e-15  Score=150.26  Aligned_cols=114  Identities=18%  Similarity=0.167  Sum_probs=92.9

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCc---hhhHHHHHHHHHHHHccCCCcccceEEEEEeCC----eE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS---GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD----ER  575 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~---~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~----~~  575 (617)
                      +.|...+.||+|+||.||++... .++.||||.++...   ....+.|.+|+.+++.++|||||++++++....    ..
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~   86 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   86 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence            45777889999999999999975 48999999997432   334567999999999999999999999987643    37


Q ss_pred             EEEEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +|||||+++|+|.+++.....-             ..|...++..|+|+||||.|
T Consensus        87 ~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~N  141 (277)
T d1o6ya_          87 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPAN  141 (277)
T ss_dssp             EEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             EEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcc
Confidence            8999999999999998764320             11344477789999999998

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.5e-15  Score=153.23  Aligned_cols=115  Identities=25%  Similarity=0.408  Sum_probs=94.1

Q ss_pred             ccCCCCcceecccCceeEEEEEEc------CCcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDER  575 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~------~g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~  575 (617)
                      .++|...++||+|+||.||+|.+.      .+..||||+++.. .......|.+|+.++++++|||||+++|+|...++.
T Consensus        19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~   98 (308)
T d1p4oa_          19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT   98 (308)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCce
Confidence            356777889999999999999874      2568999999753 334456799999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHhcCC-------CCCcCCHHHHH----------------hhhhcccccCC
Q 007129          576 MLIYEYLPNKSLNDFIFGFL-------YTEHFFWSFFF----------------SFENLSLVDRN  617 (617)
Q Consensus       576 ~lv~E~~~~GsL~~~L~~~~-------~~~~l~w~~r~----------------~i~~~~~~~~n  617 (617)
                      ++||||+++|+|.++++...       ....++|.+++                +|+|+||||+|
T Consensus        99 ~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~N  163 (308)
T d1p4oa_          99 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARN  163 (308)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGG
T ss_pred             eEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCc
Confidence            99999999999999987531       12235665443                67899999998

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.7e-15  Score=153.04  Aligned_cols=115  Identities=25%  Similarity=0.295  Sum_probs=94.5

Q ss_pred             ccCCCCcceecccCceeEEEEEEc------CCcEEEEeecccCc-hhhHHHHHHHHHHHHcc-CCCcccceEEEEEeCCe
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLI------EGQEIAAKRLSKSS-GQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQRDE  574 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~------~g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~~~  574 (617)
                      .++|...++||+|+||.||+|.+.      .++.||||+++... .....+|.+|+.++.++ +|||||+++|+|.+...
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~  101 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCE
Confidence            356777889999999999999863      25689999997543 34456899999999999 79999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcCCC---------------CCcCCHH----------------HHHhhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLY---------------TEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~---------------~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      .+|||||+++|+|.++|+....               ...++|.                +...|+|+||||+|
T Consensus       102 ~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~N  175 (311)
T d1t46a_         102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN  175 (311)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             EEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccc
Confidence            9999999999999999986431               1235555                45578899999998

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=2.7e-15  Score=148.66  Aligned_cols=112  Identities=26%  Similarity=0.331  Sum_probs=91.7

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC----CcEEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE----GQEIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~----g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      .++|...+.||+|+||.||+|....    +..||||.++.. .....+.|.+|+.++++++|||||+++|++. .+..++
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~i   84 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   84 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEE
Confidence            3567778899999999999998753    346899998654 3344578999999999999999999999985 567899


Q ss_pred             EEeccCCCCHHHHHhcCCCCCcCCHHH----------------HHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTEHFFWSF----------------FFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~~l~w~~----------------r~~i~~~~~~~~n  617 (617)
                      ||||+++|+|.+++....  ..+++..                ...|+|+||||+|
T Consensus        85 v~E~~~~g~l~~~~~~~~--~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~N  138 (273)
T d1mp8a_          85 IMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARN  138 (273)
T ss_dssp             EEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             EEEeccCCcHHhhhhccC--CCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhh
Confidence            999999999999987653  2456654                3488999999998

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=5e-15  Score=150.01  Aligned_cols=111  Identities=27%  Similarity=0.443  Sum_probs=89.2

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-Cc----EEEEeecccC-chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQ----EIAAKRLSKS-SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~----~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~l  577 (617)
                      ++|...++||+|+||.||+|.... |+    .||||+++.. ..+..++|.+|+.++++++|||||+++|+|.++ ..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence            357788999999999999998754 43    6899998643 345568899999999999999999999999864 5678


Q ss_pred             EEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ++||+.+|+|.+++....  ..++|.                +...|+|+||||+|
T Consensus        88 v~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~N  141 (317)
T d1xkka_          88 ITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARN  141 (317)
T ss_dssp             EEECCTTCBHHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             EEEeccCCcccccccccc--cCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhc
Confidence            899999999999988753  345555                34478999999998

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=2.5e-15  Score=152.27  Aligned_cols=114  Identities=21%  Similarity=0.215  Sum_probs=94.1

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHH-ccCCCcccceEEEEEeCCeEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIA-KLQHRNLVKLIGCCTQRDERMLI  578 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~-~l~H~nlv~l~g~~~~~~~~~lv  578 (617)
                      ++|...++||+|+||+||++.... ++.||||++++.   .....+.+..|+.++. .++|||||++++++.+++..+||
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            467778999999999999999865 889999999642   2234566778877665 68999999999999999999999


Q ss_pred             EeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          579 YEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       579 ~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |||+++|+|.++|.....-             ..|..-+..+|+|+||||.|
T Consensus        82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~N  133 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDN  133 (320)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG
T ss_pred             EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccc
Confidence            9999999999999764321             12555677899999999998

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=2.1e-15  Score=149.44  Aligned_cols=111  Identities=31%  Similarity=0.422  Sum_probs=83.6

Q ss_pred             cCCCCcceecccCceeEEEEEEcC--C--cEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE--G--QEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERM  576 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~--g--~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~  576 (617)
                      ++|...+.||+|+||.||+|.+..  +  ..||||+++..   ..+..++|.+|+.++++++|||||+++|++.+ +..+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence            457778899999999999998743  2  36899998643   23445789999999999999999999999965 5678


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCcCCHH----------------HHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYTEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      +|+||+++|+|.+++....  ..++|.                +...|+|+||||+|
T Consensus        87 lv~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~N  141 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARN  141 (273)
T ss_dssp             EEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             eeeeeecCcchhhhhhccc--CCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHH
Confidence            9999999999999887643  235554                45588999999998

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=6.9e-15  Score=147.62  Aligned_cols=112  Identities=26%  Similarity=0.397  Sum_probs=89.3

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      ++|...++||+|+||+||++... .++.||||+++...  ....+++.+|+.++++++|||||++++++..+...++|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            57888899999999999999985 48999999996432  2335789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCCCcCC----------------HHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYTEHFF----------------WSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~~~l~----------------w~~r~~i~~~~~~~~n  617 (617)
                      |+.+ ++..++.... ...++                .-+...|+|+||||.|
T Consensus        82 ~~~~-~~~~~~~~~~-~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeN  132 (298)
T d1gz8a_          82 FLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN  132 (298)
T ss_dssp             CCSE-EHHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             ecCC-chhhhhhhhc-ccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchh
Confidence            9965 5555554332 22233                3467799999999998

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=5.7e-15  Score=148.27  Aligned_cols=115  Identities=23%  Similarity=0.377  Sum_probs=89.2

Q ss_pred             ccCCCCcceecccCceeEEEEEEcC--------CcEEEEeecccCc-hhhHHHHHHHHHHHHcc-CCCcccceEEEEEeC
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLIE--------GQEIAAKRLSKSS-GQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQR  572 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~~--------g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~  572 (617)
                      .+.|...++||+|+||.||++....        +..||||+++... .....+|.+|+..+.++ +|||||+++++|.+.
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~   91 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   91 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence            3566777899999999999998643        2479999997543 34567899999999888 899999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCCC-------------CCcCCHH----------------HHHhhhhcccccCC
Q 007129          573 DERMLIYEYLPNKSLNDFIFGFLY-------------TEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       573 ~~~~lv~E~~~~GsL~~~L~~~~~-------------~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ...++||||+++|+|.++|.....             ...|+|.                +..+|+|+||||.|
T Consensus        92 ~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~N  165 (299)
T d1fgka_          92 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN  165 (299)
T ss_dssp             SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccc
Confidence            999999999999999999986531             1235555                55689999999998

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.52  E-value=3.5e-15  Score=148.90  Aligned_cols=114  Identities=21%  Similarity=0.241  Sum_probs=95.0

Q ss_pred             cCCCCcceecccCceeEEEEEEcCCcEEEEeecccCc--hhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSS--GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ++|...++||+|+||+||++..++++.||||+++...  ....+.|.+|+.++++++|||||++++++...+..++++||
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            4677788999999999999999889999999996432  23357899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +.++.+..+...... .            ..|.+-+...|+|+||||+|
T Consensus        82 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~N  130 (286)
T d1ob3a_          82 LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQN  130 (286)
T ss_dssp             CSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             ehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCce
Confidence            988777666654331 0            12556678899999999998

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.52  E-value=2.9e-15  Score=126.82  Aligned_cols=110  Identities=25%  Similarity=0.316  Sum_probs=90.4

Q ss_pred             EEecccCCCcEEEEcCCCCCCCCCCceEEEeecCCceEEEecCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCC
Q 007129           57 IWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDP  136 (617)
Q Consensus        57 Iw~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~~~L~l~d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~  136 (617)
                      |||.-.++.+..|+.+++.++.....+|.+..|||  |+|.++ +.++|++++. +..+..+.|+|+|||||++..    
T Consensus         3 ~~~~~~~~~~~~~tl~~~~~l~~g~~~l~~q~DGN--LvL~~~-~~~vW~s~t~-~~~~~~l~l~~dGNLvl~d~~----   74 (115)
T d1dlpa1           3 ILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCN--LVLFDS-DVRVWASNTA-GATGCRAVLQSDGLLVILTAQ----   74 (115)
T ss_dssp             CCBCSSSSSCSCSCCCTTCEECSTTEEEEECTTSC--EEEEES-SSEEECCCCC-SCSCCBCCBCSSSCBCCBCTT----
T ss_pred             EEEecCCCCCCcceecCCCcEEcCCEEEEECCCCe--EEEEcC-CeeEEEcccC-CCCceEEEEeccCCEEEEccC----
Confidence            77866667788899999999987777899999999  999985 6789999986 456788999999999999864    


Q ss_pred             CcceEeecCCCcccccCCceeeeeeecCceeEEEEcccCCCCCCeeeEEEeCCCCCcEEEEEcCCeeeEeeCC
Q 007129          137 DNFLWQSFDYPSHILIAGMKLGVNLVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGS  209 (617)
Q Consensus       137 ~~~lWqSFd~PtDTlLpgq~L~~~~~tg~~~~l~Sw~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~~~g~  209 (617)
                      +.+||||+.                               +.+.|.|.+.|+++|...+  +  ..++|.+|.
T Consensus        75 ~~~vWsS~t-------------------------------~~~~g~y~l~Lq~DGNlvl--Y--~~~~Wssgt  112 (115)
T d1dlpa1          75 NTIRWSSGT-------------------------------KGSIGNYVLVLQPDRTVTI--Y--GPGLWDSGT  112 (115)
T ss_dssp             TCCSCCCCC-------------------------------CCCSSCCEEEECSSSCEEE--E--CSEEEECSC
T ss_pred             CCEEEEcCC-------------------------------CCCCCCEEEEECCCCcEEE--e--CCCeecCCC
Confidence            678999863                               2357899999999998644  3  247888775

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.51  E-value=5.5e-14  Score=119.66  Aligned_cols=103  Identities=22%  Similarity=0.375  Sum_probs=81.5

Q ss_pred             ccccCCCcccCCCEEEeCCCeEEEEeeCCCCCCCcEEEEEecccCCCcEEEEcCCCCCCCCCCceEEEeecCCceEEEec
Q 007129           19 DTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLN   98 (617)
Q Consensus        19 ~~l~~g~~l~~~~~lvS~~g~F~~GF~~~~~~~~~~lgIw~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~~~L~l~d   98 (617)
                      ++|.+||+|    ..++..|.|.|.|...||     | +.|.   ..++||.||+..|..  ...|.|..||+  |+|.|
T Consensus        15 ~~l~~~q~l----~~~~~~~~y~l~mQ~DGN-----L-VLy~---~~~~vWssnt~~~~~--~~~l~l~~dGn--LvL~d   77 (119)
T d1b2pa_          15 QILHATESL----EILFGTHVYRFIMQTDCN-----L-VLYD---NNNPIWATNTGGLGN--GCRAVLQPDGV--LVVIT   77 (119)
T ss_dssp             CEEETTCEE----EEEETTEEEEEEECTTSC-----E-EEEE---TTEEEEECCCTTSCS--SCEEEECTTSC--EEEEC
T ss_pred             CEEeCCCeE----EEecCCceEEEEECCCCc-----E-EEEE---CCeEEEEecCCCCCc--ceEEEEEeCCC--EEEEC
Confidence            455555555    347789999999999886     2 2343   467899999987743  46899999999  99999


Q ss_pred             CCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecC
Q 007129           99 STNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFD  145 (617)
Q Consensus        99 ~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd  145 (617)
                      ++|.+||++++.......+++|+|+|||||++.       .+|||-.
T Consensus        78 ~~g~~vWsS~t~~~~~~~~l~Lq~DGNlvlYg~-------~~W~S~T  117 (119)
T d1b2pa_          78 NENVTVWQSPVAGKAGHYVLVLQPDRNVVIYGD-------ALWATQT  117 (119)
T ss_dssp             TTCCEEEECSCCCCSSCEEEEECTTSCEEEEES-------EEEECCC
T ss_pred             CCCcEEEECCCcCCCCceEEEEcCCCCEEEECC-------CEeccCC
Confidence            999999999987544556789999999999963       5999864

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.51  E-value=6.6e-15  Score=151.01  Aligned_cols=114  Identities=22%  Similarity=0.238  Sum_probs=96.9

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC---chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS---SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~---~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~  579 (617)
                      ++|...++||+|+||.||++.... |+.||||++...   .....+.+.+|+.++..++|||||++++++......++|+
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            467888999999999999999864 899999998642   2234577999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+.+|+|..+|..... .            ..|..-++.+|+|+||||.|
T Consensus       121 e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~N  171 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN  171 (350)
T ss_dssp             ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             ccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHH
Confidence            99999999999976432 1            12556688899999999998

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.50  E-value=6.1e-15  Score=152.07  Aligned_cols=114  Identities=22%  Similarity=0.172  Sum_probs=91.4

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCc---hhhHHHHHHH---HHHHHccCCCcccceEEEEEeCCeEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSS---GQGMEEFENE---VLLIAKLQHRNLVKLIGCCTQRDERM  576 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~---~~~~~~f~~E---v~~l~~l~H~nlv~l~g~~~~~~~~~  576 (617)
                      ++|...++||+|+||.||++.... |+.||||++.+..   ......+.+|   +.+++.++|||||++++++...+..+
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            578888999999999999999865 8999999986321   1223334444   66777788999999999999999999


Q ss_pred             EEEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      |||||+++|+|.++|.....-             ..|...+...|+|+||||.|
T Consensus        84 ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~N  137 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPAN  137 (364)
T ss_dssp             EEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             EEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccce
Confidence            999999999999999764321             12455577799999999998

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1e-14  Score=146.37  Aligned_cols=109  Identities=20%  Similarity=0.236  Sum_probs=85.6

Q ss_pred             cceecccCceeEEEEEEcC-CcEEEEeecccCchh-----hHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEecc
Q 007129          509 KNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQ-----GMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYEYL  582 (617)
Q Consensus       509 ~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~-----~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E~~  582 (617)
                      .++||+|+||+||++.... |+.||||+++.....     ..+.+.+|+.++++++|||||++++++...+..+|||||+
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~   82 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM   82 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence            4689999999999999865 899999998643221     1246899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          583 PNKSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       583 ~~GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      +++.+..++..... .            ..|..-+...|+|+||||+|
T Consensus        83 ~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~N  130 (299)
T d1ua2a_          83 ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNN  130 (299)
T ss_dssp             SEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             cchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcce
Confidence            88877666543321 1            12445577799999999998

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=2e-14  Score=146.45  Aligned_cols=108  Identities=19%  Similarity=0.166  Sum_probs=86.0

Q ss_pred             cCCCCcc-eecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHcc-CCCcccceEEEEEe----CCeEE
Q 007129          504 ENFSDKN-KLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQ----RDERM  576 (617)
Q Consensus       504 ~~f~~~~-~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~----~~~~~  576 (617)
                      ++|.... .||+|+||.||++.... ++.||||.++.     .+.+.+|+.++.++ +|||||++++++..    ....+
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~   85 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   85 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence            4566544 59999999999998754 89999999863     24677899887655 89999999998865    35689


Q ss_pred             EEEeccCCCCHHHHHhcCCCCCcCCH----------------HHHHhhhhcccccCC
Q 007129          577 LIYEYLPNKSLNDFIFGFLYTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       577 lv~E~~~~GsL~~~L~~~~~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      ||||||++|+|.++|.... ...+++                -+...|+||||||.|
T Consensus        86 ivmEy~~gg~L~~~i~~~~-~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~N  141 (335)
T d2ozaa1          86 IVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN  141 (335)
T ss_dssp             EEEECCCSEEHHHHHHSCS-CCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             EEEECCCCCcHHHHHHhcC-CCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccc
Confidence            9999999999999998643 223443                366789999999998

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=3.2e-14  Score=142.00  Aligned_cols=114  Identities=20%  Similarity=0.252  Sum_probs=94.9

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCCeEEEEEe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRDERMLIYE  580 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~~~~lv~E  580 (617)
                      +.|...++||+|+||+||++.... ++.||||+++..  .....+++.+|+.+++.++||||+++++++......++|+|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            457778899999999999999854 889999998643  23445789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          581 YLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       581 ~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++.+++|..++.....-             ..|..-++..|+|+||||.|
T Consensus        82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~N  131 (292)
T d1unla_          82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQN  131 (292)
T ss_dssp             CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             eccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcc
Confidence            99999998888755321             11344467799999999998

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=5e-14  Score=141.29  Aligned_cols=116  Identities=21%  Similarity=0.328  Sum_probs=89.6

Q ss_pred             hccCCCCcceecccCceeEEEEEEcC------CcEEEEeecccC-chhhHHHHHHHHHHHHcc-CCCcccceEEEEEeC-
Q 007129          502 ATENFSDKNKLGEGGFGPVYKGVLIE------GQEIAAKRLSKS-SGQGMEEFENEVLLIAKL-QHRNLVKLIGCCTQR-  572 (617)
Q Consensus       502 at~~f~~~~~lG~G~fG~Vykg~l~~------g~~vAvK~l~~~-~~~~~~~f~~Ev~~l~~l-~H~nlv~l~g~~~~~-  572 (617)
                      ..++|...++||+|+||.||+|....      ++.||||+++.. .....++|.+|+..+.++ +|+|||.+.+++.+. 
T Consensus        11 ~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~   90 (299)
T d1ywna1          11 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   90 (299)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             cHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCC
Confidence            34668888999999999999998743      368999999743 334457788898888877 789999999998765 


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCCC-------------CCcCCHH----------------HHHhhhhcccccCC
Q 007129          573 DERMLIYEYLPNKSLNDFIFGFLY-------------TEHFFWS----------------FFFSFENLSLVDRN  617 (617)
Q Consensus       573 ~~~~lv~E~~~~GsL~~~L~~~~~-------------~~~l~w~----------------~r~~i~~~~~~~~n  617 (617)
                      ...++||||+++|+|.++|+....             ...++|.                +...|+|+||||+|
T Consensus        91 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~N  164 (299)
T d1ywna1          91 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN  164 (299)
T ss_dssp             SCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             CeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccc
Confidence            467999999999999999975421             2235665                44577899999998

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=7.4e-14  Score=142.98  Aligned_cols=114  Identities=13%  Similarity=0.183  Sum_probs=87.2

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccCc-hhhHHHHHHHHHHHHccCCCcccceEEEEEeCC----eEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSS-GQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD----ERML  577 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~-~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~----~~~l  577 (617)
                      +.|...++||+|+||+||++... .|+.||||+++... ....+.+++|+.+|.+++|||++++++++....    ..++
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~   87 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY   87 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence            45777889999999999999875 48999999997543 344578999999999999999999999986643    2345


Q ss_pred             EEeccCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ++||+.+|+|.+++......            ..|..-++.+|+|+||||.|
T Consensus        88 l~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~N  139 (345)
T d1pmea_          88 LVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN  139 (345)
T ss_dssp             EEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             EEEeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcce
Confidence            55667799999999754321            12444477899999999998

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=1.2e-13  Score=141.79  Aligned_cols=109  Identities=21%  Similarity=0.298  Sum_probs=81.8

Q ss_pred             CCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccceEEEEEeC------CeEEE
Q 007129          505 NFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR------DERML  577 (617)
Q Consensus       505 ~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~------~~~~l  577 (617)
                      .|...++||+|+||+||++.... ++.||||++.....    .+.+|+.++++++|||||++++++...      .+.+|
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            35666899999999999999865 89999999965322    234799999999999999999998653      24789


Q ss_pred             EEeccCCCCHHHHHhcCCCCCcCCH----------------HHHHhhhhcccccCC
Q 007129          578 IYEYLPNKSLNDFIFGFLYTEHFFW----------------SFFFSFENLSLVDRN  617 (617)
Q Consensus       578 v~E~~~~GsL~~~L~~~~~~~~l~w----------------~~r~~i~~~~~~~~n  617 (617)
                      ||||++++.+............+++                -+...|+|+||||+|
T Consensus        97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~N  152 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQN  152 (350)
T ss_dssp             EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGG
T ss_pred             EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcce
Confidence            9999986644433321111223444                366799999999998

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.1e-13  Score=141.87  Aligned_cols=113  Identities=19%  Similarity=0.286  Sum_probs=84.5

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeCC------e
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQRD------E  574 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~~------~  574 (617)
                      +.|...++||+|+||+||++.... |+.||||+++..  .....+.+.+|+.+|++++|||+|++++++...+      +
T Consensus        18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~   97 (346)
T d1cm8a_          18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD   97 (346)
T ss_dssp             SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred             CcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccce
Confidence            567778899999999999999754 899999999743  3344578999999999999999999999997654      4


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      .+|||||+ +.+|..++......            ..|..-+...|+|+||||+|
T Consensus        98 ~~lv~e~~-~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~N  151 (346)
T d1cm8a_          98 FYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGN  151 (346)
T ss_dssp             CEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             EEEEEecc-cccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcch
Confidence            69999999 56787777543311            12344477799999999998

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.38  E-value=1.1e-13  Score=140.50  Aligned_cols=111  Identities=14%  Similarity=0.302  Sum_probs=89.9

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccC-CCcccceEEEEEeC--CeEEEEE
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQ-HRNLVKLIGCCTQR--DERMLIY  579 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~~--~~~~lv~  579 (617)
                      ++|...++||+|+||+||++.... ++.||||+++..   ..+++.+|+.+|.+++ ||||+++++++...  ...++||
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            568888999999999999999854 889999998643   3567899999999995 99999999998753  4689999


Q ss_pred             eccCCCCHHHHHhcCCCC----------CcCCHHHHHhhhhcccccCC
Q 007129          580 EYLPNKSLNDFIFGFLYT----------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       580 E~~~~GsL~~~L~~~~~~----------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ||+++++|..+...-...          ..|..-+...|+|+||||+|
T Consensus       112 e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~N  159 (328)
T d3bqca1         112 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHN  159 (328)
T ss_dssp             ECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             eecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccc
Confidence            999999998764321100          12555688899999999998

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.2e-13  Score=141.40  Aligned_cols=115  Identities=20%  Similarity=0.272  Sum_probs=91.9

Q ss_pred             ccCCCCcceecccCceeEEEEEEc-CCcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeC-----Ce
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR-----DE  574 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~-----~~  574 (617)
                      .+.|...++||+|+||+||++... +|+.||||+++..  .....+.+.+|+.++++++|||+|++++++...     ..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            456888889999999999999875 4899999999743  234456789999999999999999999998643     23


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCC------------CcCCHHHHHhhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLYT------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      .++++||+.+|+|.+++...+..            ..|..-+...|+|+||||.|
T Consensus        97 ~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~N  151 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN  151 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             eEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCcc
Confidence            46677888899999999654321            12455578899999999998

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=7.4e-14  Score=141.44  Aligned_cols=114  Identities=21%  Similarity=0.199  Sum_probs=94.0

Q ss_pred             cCCCCcceecccCceeEEEEEEc----CCcEEEEeecccC----chhhHHHHHHHHHHHHccCC-CcccceEEEEEeCCe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI----EGQEIAAKRLSKS----SGQGMEEFENEVLLIAKLQH-RNLVKLIGCCTQRDE  574 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~----~g~~vAvK~l~~~----~~~~~~~f~~Ev~~l~~l~H-~nlv~l~g~~~~~~~  574 (617)
                      ++|...++||+|+||.||++...    .|+.||||.++..    .....+.+.+|+.++.+++| |||+++++++.....
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            56888899999999999999862    3789999998642    12334678999999999965 899999999999999


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCCC-------------cCCHHHHHhhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLYTE-------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~~~-------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      .++++||+.+|+|.+++.......             .|...+..+|+|+||||+|
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~N  159 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLEN  159 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             eeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccc
Confidence            999999999999999997654211             1444577799999999998

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=2.2e-13  Score=137.76  Aligned_cols=114  Identities=18%  Similarity=0.303  Sum_probs=88.2

Q ss_pred             cCCCCcceecccCceeEEEEEEc-CCcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEeC--------
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQR--------  572 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~~--------  572 (617)
                      ++|...++||+|+||+||++... +|+.||||++...  .....+++.+|+.++++++|||++++++.+...        
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~   89 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   89 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence            56778899999999999999985 4899999998533  233457899999999999999999999988653        


Q ss_pred             CeEEEEEeccCCCCHHHHHhcCCCC-------------CcCCHHHHHhhhhcccccCC
Q 007129          573 DERMLIYEYLPNKSLNDFIFGFLYT-------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       573 ~~~~lv~E~~~~GsL~~~L~~~~~~-------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      ...++|+||++++.+..+......-             ..|.+.+...|+|+||||+|
T Consensus        90 ~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~N  147 (318)
T d3blha1          90 GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAAN  147 (318)
T ss_dssp             -CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             ceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchh
Confidence            4578999999887766554432211             12556677899999999998

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=1.3e-13  Score=136.26  Aligned_cols=114  Identities=25%  Similarity=0.331  Sum_probs=89.9

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCch------hhHHHHHHHHHHHHccC--CCcccceEEEEEeCCe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSG------QGMEEFENEVLLIAKLQ--HRNLVKLIGCCTQRDE  574 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~------~~~~~f~~Ev~~l~~l~--H~nlv~l~g~~~~~~~  574 (617)
                      +.|...++||+|+||.||++.... ++.||||.++....      ....++.+|+.++++++  |||||++++++...+.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            457778899999999999999854 89999999864211      12245778999999986  8999999999999999


Q ss_pred             EEEEEeccCC-CCHHHHHhcCCC-C------------CcCCHHHHHhhhhcccccCC
Q 007129          575 RMLIYEYLPN-KSLNDFIFGFLY-T------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~-GsL~~~L~~~~~-~------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      .++||||+.+ +++.+++..... .            ..|..-+...|+|+||||.|
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~N  140 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN  140 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             EEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccc
Confidence            9999999975 688888765321 0            11344467789999999998

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=4.5e-13  Score=137.58  Aligned_cols=113  Identities=19%  Similarity=0.225  Sum_probs=87.4

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccC--chhhHHHHHHHHHHHHccCCCcccceEEEEEe------CCe
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKS--SGQGMEEFENEVLLIAKLQHRNLVKLIGCCTQ------RDE  574 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~--~~~~~~~f~~Ev~~l~~l~H~nlv~l~g~~~~------~~~  574 (617)
                      +.|...++||+|+||+||+|.... |+.||||+++..  .....+.+.+|+.++++++|||||++++++..      ..+
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            567788899999999999999864 899999999743  23445679999999999999999999999864      367


Q ss_pred             EEEEEeccCCCCHHHHHhcCCCC-----------CcCCHHHHHhhhhcccccCC
Q 007129          575 RMLIYEYLPNKSLNDFIFGFLYT-----------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       575 ~~lv~E~~~~GsL~~~L~~~~~~-----------~~l~w~~r~~i~~~~~~~~n  617 (617)
                      .++||||+.+ +|.+.+...-..           ..|..-+...|+|+||||.|
T Consensus        97 ~~iv~Ey~~~-~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~N  149 (355)
T d2b1pa1          97 VYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN  149 (355)
T ss_dssp             EEEEEECCSE-EHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             eEEEEeccch-HHHHhhhcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccc
Confidence            8999999965 555555443210           12455578899999999988

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.31  E-value=6.6e-13  Score=132.53  Aligned_cols=111  Identities=17%  Similarity=0.174  Sum_probs=89.7

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCC-CcccceEEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQH-RNLVKLIGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H-~nlv~l~g~~~~~~~~~lv~E~  581 (617)
                      ++|...++||+|+||.||+|.... ++.||||.++...  ..+++.+|++.+..++| +|++.++++..+....++||||
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~   82 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   82 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEe
Confidence            467778899999999999999764 8899999885432  23457888889999865 8999999999999999999999


Q ss_pred             cCCCCHHHHHhcCCCCC--------------cCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTE--------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~--------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      + +|+|.+++......-              .|...++..|+|+||||.|
T Consensus        83 ~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~N  131 (293)
T d1csna_          83 L-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDN  131 (293)
T ss_dssp             C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGG
T ss_pred             c-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccc
Confidence            9 689999987643211              1333466689999999998

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=6.3e-13  Score=133.44  Aligned_cols=115  Identities=20%  Similarity=0.256  Sum_probs=84.9

Q ss_pred             ccCCCCcceecccCceeEEEEEEc-C-CcEEEEeecccCc--hhhHHHHHHHHHHHHcc---CCCcccceEEEEEe----
Q 007129          503 TENFSDKNKLGEGGFGPVYKGVLI-E-GQEIAAKRLSKSS--GQGMEEFENEVLLIAKL---QHRNLVKLIGCCTQ----  571 (617)
Q Consensus       503 t~~f~~~~~lG~G~fG~Vykg~l~-~-g~~vAvK~l~~~~--~~~~~~f~~Ev~~l~~l---~H~nlv~l~g~~~~----  571 (617)
                      .++|...++||+|+||.||++... . ++.||||+++...  .....++.+|+.+++.+   +||||+++++++..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            467888899999999999999874 3 5679999986432  22234566777776655   89999999999864    


Q ss_pred             -CCeEEEEEeccCCCCHHHHHhcCCCC--------------CcCCHHHHHhhhhcccccCC
Q 007129          572 -RDERMLIYEYLPNKSLNDFIFGFLYT--------------EHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       572 -~~~~~lv~E~~~~GsL~~~L~~~~~~--------------~~l~w~~r~~i~~~~~~~~n  617 (617)
                       ....++++||++++.+..........              ..|..-+...|+|+||||+|
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~N  146 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQN  146 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             cCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccE
Confidence             24678999999988776555443221              12344477799999999998

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.25  E-value=5.8e-12  Score=106.15  Aligned_cols=98  Identities=26%  Similarity=0.379  Sum_probs=74.5

Q ss_pred             CcccCCCEEEeCCCeEEEEeeCCCCCCCcEEEEEecccCCCcEEEEcCCCCCCCCCCceEEEeecCCceEEEecCCCcEE
Q 007129           25 QSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLNSTNGIV  104 (617)
Q Consensus        25 ~~l~~~~~lvS~~g~F~~GF~~~~~~~~~~lgIw~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~~~L~l~d~~~~~v  104 (617)
                      |+|..++.|  .+|.|.|.|...|+     |.++.    ..++||.+|...+   ..+.+.|..+||  |+|.|.++.+|
T Consensus        15 ~tl~~~~~l--~~g~~~l~~q~DGN-----LvL~~----~~~~vW~s~t~~~---~~~~l~l~~dGN--Lvl~d~~~~~v   78 (115)
T d1dlpa1          15 QTLHAAQSL--ELSSFRFTMQSDCN-----LVLFD----SDVRVWASNTAGA---TGCRAVLQSDGL--LVILTAQNTIR   78 (115)
T ss_dssp             SCCCTTCEE--CSTTEEEEECTTSC-----EEEEE----SSSEEECCCCCSC---SCCBCCBCSSSC--BCCBCTTTCCS
T ss_pred             ceecCCCcE--EcCCEEEEECCCCe-----EEEEc----CCeeEEEcccCCC---CceEEEEeccCC--EEEEccCCCEE
Confidence            344444444  35779999988876     33433    4578999997643   347899999999  99999999999


Q ss_pred             EEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecC
Q 007129          105 WSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFD  145 (617)
Q Consensus       105 Wss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd  145 (617)
                      |++.+.......+++|+++|||||++.       .+|+|-.
T Consensus        79 WsS~t~~~~g~y~l~Lq~DGNlvlY~~-------~~Wssgt  112 (115)
T d1dlpa1          79 WSSGTKGSIGNYVLVLQPDRTVTIYGP-------GLWDSGT  112 (115)
T ss_dssp             CCCCCCCCSSCCEEEECSSSCEEEECS-------EEEECSC
T ss_pred             EEcCCCCCCCCEEEEECCCCcEEEeCC-------CeecCCC
Confidence            999987555566799999999999953       5899853

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.24  E-value=6.5e-12  Score=125.53  Aligned_cols=111  Identities=21%  Similarity=0.248  Sum_probs=83.4

Q ss_pred             cCCCCcceecccCceeEEEEEEcC-CcEEEEeecccCchhhHHHHHHHHHHHHccCCCcccce-EEEEEeCCeEEEEEec
Q 007129          504 ENFSDKNKLGEGGFGPVYKGVLIE-GQEIAAKRLSKSSGQGMEEFENEVLLIAKLQHRNLVKL-IGCCTQRDERMLIYEY  581 (617)
Q Consensus       504 ~~f~~~~~lG~G~fG~Vykg~l~~-g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~H~nlv~l-~g~~~~~~~~~lv~E~  581 (617)
                      +.|...++||+|+||.||+|.... ++.||||.+....  ..+++..|++++..++|+|++.+ .++..+.+..++||||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            357778899999999999998754 8899999886432  23468899999999987765555 5555778888999999


Q ss_pred             cCCCCHHHHHhcCCCCC--------------cCCHHHHHhhhhcccccCC
Q 007129          582 LPNKSLNDFIFGFLYTE--------------HFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       582 ~~~GsL~~~L~~~~~~~--------------~l~w~~r~~i~~~~~~~~n  617 (617)
                      + +|+|...+......-              .|..-++..|+|+||||+|
T Consensus        85 ~-~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~N  133 (299)
T d1ckia_          85 L-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDN  133 (299)
T ss_dssp             C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             c-CCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhh
Confidence            9 567776665433211              1233366689999999998

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=98.94  E-value=1.4e-09  Score=92.21  Aligned_cols=97  Identities=26%  Similarity=0.417  Sum_probs=68.8

Q ss_pred             ccccCCCcccCCCEEEeCCCeEEEEeeCCCCCCCcEEEEEecccCCCcEEEEcCCCCCCCCCCceEEEeecCCceEEEec
Q 007129           19 DTLNLGQSIRDGETLVSANESFELGFFSPGKSKSRYLGIWYKKIGNGTVIWVANRDAPLSDRSGALNISSQGNATLVLLN   98 (617)
Q Consensus        19 ~~l~~g~~l~~~~~lvS~~g~F~~GF~~~~~~~~~~lgIw~~~~~~~tvVW~ANr~~pv~~~~~~l~l~~~G~~~L~l~d   98 (617)
                      ++|.++++|+.        |.|.|.|-..|+     |.|+.    ...+||.+|-..  ......+.|..+||  |+|+|
T Consensus        24 ~~l~~~q~l~~--------g~y~L~~q~DGN-----LvL~~----~~~~vW~s~t~~--~~~~~~~~l~~~Gn--Lvl~d   82 (120)
T d1dlpa2          24 QTLHATQSLQL--------SPYRLSMETDCN-----LVLFD----RDDRVWSTNTAG--KGTGCRAVLQPNGR--MDVLT   82 (120)
T ss_dssp             CEECSSCCCBC--------SSCEEEEETTTE-----EEEEB----TTBCCSCCCCCS--SCSSCEEEEETTTE--EEEEE
T ss_pred             cEEcCCCeeEc--------CCEEEEEcCCCc-----EEEec----CCcEEEEEcccc--CCCcEEEEEeCCee--EEEEc
Confidence            34555555544        457776655543     23332    346789988432  23346799999999  99999


Q ss_pred             CCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEee
Q 007129           99 STNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQS  143 (617)
Q Consensus        99 ~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqS  143 (617)
                      .++.++|+|++.......++.|.++|||||++.       .+|.|
T Consensus        83 ~~~~~lW~S~t~~~~~~~~l~Lq~DGnlvlY~~-------~~W~t  120 (120)
T d1dlpa2          83 NQNIAVWTSGNSRSAGRYVFVLQPDRNLAIYGG-------ALWTT  120 (120)
T ss_dssp             TTTEEEEECCCCCSSSCCEEEECSSSCEEEECC-------CCCBC
T ss_pred             CCCCEEEEeCCCCCCCcEEEEECCCCcEEEeCC-------CcccC
Confidence            999999999986545556789999999999953       37875

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.88  E-value=3.1e-10  Score=105.22  Aligned_cols=106  Identities=17%  Similarity=0.062  Sum_probs=76.2

Q ss_pred             CcceecccCceeEEEEEEcCCcEEEEeecccCch------------------hhHHHHHHHHHHHHccCCCcccceEEEE
Q 007129          508 DKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSG------------------QGMEEFENEVLLIAKLQHRNLVKLIGCC  569 (617)
Q Consensus       508 ~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~------------------~~~~~f~~Ev~~l~~l~H~nlv~l~g~~  569 (617)
                      ..++||+|+||.||+|...+|+.||||.++....                  ........|...+.++.|++++..+++.
T Consensus         4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~   83 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE   83 (191)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred             hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence            3579999999999999988899999998642100                  1123456788889999999999987653


Q ss_pred             EeCCeEEEEEeccCCCCHHHHHhcCCC------CCcCCHHHHHhhhhcccccCC
Q 007129          570 TQRDERMLIYEYLPNKSLNDFIFGFLY------TEHFFWSFFFSFENLSLVDRN  617 (617)
Q Consensus       570 ~~~~~~~lv~E~~~~GsL~~~L~~~~~------~~~l~w~~r~~i~~~~~~~~n  617 (617)
                        .  .+++|||+++..+.++......      -..+..-++..|+|+||||.|
T Consensus        84 --~--~~lvme~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~N  133 (191)
T d1zara2          84 --G--NAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYN  133 (191)
T ss_dssp             --T--TEEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTS
T ss_pred             --C--CEEEEEeeccccccchhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhh
Confidence              2  3799999988766543211100      012456688899999999998

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=98.84  E-value=8.9e-09  Score=86.82  Aligned_cols=85  Identities=24%  Similarity=0.340  Sum_probs=65.1

Q ss_pred             eEEEeecCCceEEEecCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecCCCcccccCCceeeeeee
Q 007129           83 ALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNLV  162 (617)
Q Consensus        83 ~l~l~~~G~~~L~l~d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~PtDTlLpgq~L~~~~~  162 (617)
                      +|.+..|||  |||.+. +.++|++++.+......+.|.++|||||+|.+    +.++|+|.-                 
T Consensus        33 ~l~mQ~DGN--LVLy~~-~~~vWssnt~~~~~~~~l~l~~dGnLvL~d~~----g~~vWsS~t-----------------   88 (119)
T d1b2pa_          33 RFIMQTDCN--LVLYDN-NNPIWATNTGGLGNGCRAVLQPDGVLVVITNE----NVTVWQSPV-----------------   88 (119)
T ss_dssp             EEEECTTSC--EEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECTT----CCEEEECSC-----------------
T ss_pred             EEEECCCCc--EEEEEC-CeEEEEecCCCCCcceEEEEEeCCCEEEECCC----CcEEEECCC-----------------
Confidence            578889999  999976 55899999874445678999999999999974    778998621                 


Q ss_pred             cCceeEEEEcccCCCCCCeeeEEEeCCCCCcEEEEEcCCeeeEeeCC
Q 007129          163 TGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGS  209 (617)
Q Consensus       163 tg~~~~l~Sw~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~~~g~  209 (617)
                                    .-..|.|.+.|+++|...++    ..+.|.++.
T Consensus        89 --------------~~~~~~~~l~Lq~DGNlvlY----g~~~W~S~T  117 (119)
T d1b2pa_          89 --------------AGKAGHYVLVLQPDRNVVIY----GDALWATQT  117 (119)
T ss_dssp             --------------CCCSSCEEEEECTTSCEEEE----ESEEEECCC
T ss_pred             --------------cCCCCceEEEEcCCCCEEEE----CCCEeccCC
Confidence                          12456788999999987654    236787764

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.82  E-value=2e-09  Score=109.90  Aligned_cols=111  Identities=14%  Similarity=0.125  Sum_probs=77.5

Q ss_pred             CCCcceecccCceeEEEEEEc-CCcEEEEeecccCchhhHHHHHHHHHHHHccC-----------CCcccceEEEEEe--
Q 007129          506 FSDKNKLGEGGFGPVYKGVLI-EGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQ-----------HRNLVKLIGCCTQ--  571 (617)
Q Consensus       506 f~~~~~lG~G~fG~Vykg~l~-~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~-----------H~nlv~l~g~~~~--  571 (617)
                      |...++||+|+||+||+++.. +|+.||||+++.. ....+.+.+|+.++..++           |+|||++++++..  
T Consensus        15 Y~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~-~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~   93 (362)
T d1q8ya_          15 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKG   93 (362)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEE
T ss_pred             EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecc-ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeecc
Confidence            777899999999999999975 4899999999753 233467888888887765           5789999988765  


Q ss_pred             CCeEEEEEeccCCCCHHHHHhcCCCCCcC----------------CHHH-HHhhhhcccccCC
Q 007129          572 RDERMLIYEYLPNKSLNDFIFGFLYTEHF----------------FWSF-FFSFENLSLVDRN  617 (617)
Q Consensus       572 ~~~~~lv~E~~~~GsL~~~L~~~~~~~~l----------------~w~~-r~~i~~~~~~~~n  617 (617)
                      ....+++++++..+..............+                ...+ +..|+|+||||.|
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~N  156 (362)
T d1q8ya_          94 PNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPEN  156 (362)
T ss_dssp             TTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGG
T ss_pred             ccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhH
Confidence            34566777766554433322221111112                1223 4679999999998

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=98.75  E-value=1.9e-08  Score=83.51  Aligned_cols=77  Identities=21%  Similarity=0.333  Sum_probs=60.0

Q ss_pred             ceEEEeecCCceEEEecCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecCCCcccccCCceeeeee
Q 007129           82 GALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNL  161 (617)
Q Consensus        82 ~~l~l~~~G~~~L~l~d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~PtDTlLpgq~L~~~~  161 (617)
                      -+|.+..|||  |+|.+. +.+||++++........+.|.++|||||++.+    +.++|+|                  
T Consensus        21 ~~l~~q~DGN--Lvly~~-~~~vW~s~~~~~~~~~~l~l~~~Gnlvl~~~~----g~~vWsS------------------   75 (108)
T d1jpca_          21 FVFIMQEDCN--LVLYDV-DKPIWATNTGGLSRSCFLSMQTDGNLVVYNPS----NKPIWAS------------------   75 (108)
T ss_dssp             EEEEECTTSC--EEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECTT----CCEEEEC------------------
T ss_pred             EEEEECCCCe--EEEEeC-CceeeEeCCCCCCCccEEEEeccceEEEECCC----ccceEEc------------------
Confidence            5788899999  999985 56899999864444568999999999999874    7789986                  


Q ss_pred             ecCceeEEEEcccCCCCCCeeeEEEeCCCCCcEEE
Q 007129          162 VTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAV  196 (617)
Q Consensus       162 ~tg~~~~l~Sw~s~~d~s~G~~~l~~~~~g~~~~~  196 (617)
                                   .+....+.|.+.|+++|...++
T Consensus        76 -------------~t~~~~~~~~l~L~ddGNlVly   97 (108)
T d1jpca_          76 -------------NTGGQNGNYVCILQKDRNVVIY   97 (108)
T ss_dssp             -------------CCCCSCSCEEEEECTTSCEEEE
T ss_pred             -------------cccCCCCcEEEEEcCCCCEEEe
Confidence                         1112456788999999976554

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=98.69  E-value=6.1e-08  Score=80.37  Aligned_cols=86  Identities=27%  Similarity=0.387  Sum_probs=64.1

Q ss_pred             ceEEEeecCCceEEEecCCCcEEEEecCCC-CCCCceEEEecCCCEEEecCCCCCCCcceEeecCCCcccccCCceeeee
Q 007129           82 GALNISSQGNATLVLLNSTNGIVWSSNASR-TARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVN  160 (617)
Q Consensus        82 ~~l~l~~~G~~~L~l~d~~~~~vWss~~~~-~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~PtDTlLpgq~L~~~  160 (617)
                      -.|.+..|||  |+|.+. +.+||++++.. ......+.|.++|||||++.+    +.++|+|=                
T Consensus        21 ~~l~~q~dgn--Lvl~~~-~~~vW~ant~~~~~~~~~l~l~~dGnLvl~~~~----g~~vW~s~----------------   77 (109)
T d1kj1a_          21 YHFIMQEDCN--LVLYDH-STSVWASNTGILGKKGCKAVLQSDGNFVVYDAE----GRSLWASH----------------   77 (109)
T ss_dssp             EEEEECTTSC--EEEEET-TEEEEECCCCCTTCCCCEEEECTTSCEEEECSS----SCEEEECC----------------
T ss_pred             EEEEecCCCe--EEEEeC-CEEEEEeCCCCCCceeEEEEEcCCceEEEEeCC----CcEEEEEe----------------
Confidence            5688888999  999874 56899999763 334567899999999999964    77899861                


Q ss_pred             eecCceeEEEEcccCCCCCCeeeEEEeCCCCCcEEEEEcCCeeeEeeCC
Q 007129          161 LVTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGS  209 (617)
Q Consensus       161 ~~tg~~~~l~Sw~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~~~g~  209 (617)
                                     +....|.|.+.|+++|...++  +  .+.|.++.
T Consensus        78 ---------------t~~~~~~~~l~L~ddGNlvly--~--~~~W~S~t  107 (109)
T d1kj1a_          78 ---------------SVRGNGNYVLVLQEDGNVVIY--G--SDIWSTGT  107 (109)
T ss_dssp             ---------------CCCCSSCCEEEECTTSCEEEE--C--CEEEECCC
T ss_pred             ---------------eECCCCCEEEEEeCCCcEEEE--C--CCEecCCC
Confidence                           112356788999999987554  2  35787764

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=98.43  E-value=8e-07  Score=73.93  Aligned_cols=88  Identities=22%  Similarity=0.344  Sum_probs=64.8

Q ss_pred             ceEEEeecCCceEEEecCCCcEEEEecCCCCCCCceEEEecCCCEEEecCCCCCCCcceEeecCCCcccccCCceeeeee
Q 007129           82 GALNISSQGNATLVLLNSTNGIVWSSNASRTARNPVAVLLESGNLVVKDGKDIDPDNFLWQSFDYPSHILIAGMKLGVNL  161 (617)
Q Consensus        82 ~~l~l~~~G~~~L~l~d~~~~~vWss~~~~~~~~~~a~Lld~GNlVl~~~~~~~~~~~lWqSFd~PtDTlLpgq~L~~~~  161 (617)
                      -.|.+..|||  |+|.+. +.+||++++......+.+.|..+|||||++.     ++.+|.|                  
T Consensus        21 ~~l~~q~DGN--Lvly~~-~~~vW~s~~~~~~~~~~l~l~~dGnLvl~~~-----~~~~w~s------------------   74 (112)
T d1xd5a_          21 YLFIIQNDCN--LVLYDN-NRAVWASGTNGKASGCVLKMQNDGNLVIYSG-----SRAIWAS------------------   74 (112)
T ss_dssp             EEEEECTTSC--EEEEET-TEEEEECCCTTSCSSEEEEECTTSCEEEEET-----TEEEEEC------------------
T ss_pred             EEEEEcCCCC--EEEEcC-CcEEEEccCccCCCCcEEEEeccccEEEEec-----CCeEEEE------------------
Confidence            5788999999  999875 5699999976444567899999999999985     3456644                  


Q ss_pred             ecCceeEEEEcccCCCCCCeeeEEEeCCCCCcEEEEEcCCeeeEeeCC
Q 007129          162 VTGLNRFISSWKSADDPAQDDYVYGIDPSGVPQAVFRKGSTIRYRAGS  209 (617)
Q Consensus       162 ~tg~~~~l~Sw~s~~d~s~G~~~l~~~~~g~~~~~~~~~~~~~~~~g~  209 (617)
                                   .+....|.|.+.|+++|...++ .....+.|.++.
T Consensus        75 -------------~t~~~~~~~~l~L~ddGNlvly-~~~~~~~W~S~t  108 (112)
T d1xd5a_          75 -------------NTNRQNGNYYLILQRDRNVVIY-DNSNNAIWATHT  108 (112)
T ss_dssp             -------------CCCCSCCCCEEEECTTSCEEEE-CTTSCEEEECCC
T ss_pred             -------------eeccCCCceEEEEcCCCCEEEE-CCCCcEEecCCC
Confidence                         2222456789999999976554 233457888765

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.74  E-value=0.012  Score=38.37  Aligned_cols=33  Identities=27%  Similarity=0.641  Sum_probs=26.0

Q ss_pred             ccccc-ccccCCceeeccCCCCcccccCCCCCcC
Q 007129          285 DQCDN-YALCGAYAVCNMNSNSAKCECLEGFVPK  317 (617)
Q Consensus       285 ~~C~~-~~~CG~~g~C~~~~~~~~C~C~~Gf~~~  317 (617)
                      |+|.. ...|..+|.|......+.|.|++||+..
T Consensus         4 deC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~G~   37 (42)
T d2vj3a1           4 DECSLGANPCEHAGKCINTLGSFECQCLQGYTGP   37 (42)
T ss_dssp             CTTTSSSCSSSTTCEEEECSSSEEEECCTTEEST
T ss_pred             ccccCCCCCCCCCcEeECCCCCEEeECCCCCcCC
Confidence            56865 5679999999865555689999999764

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.29  E-value=0.022  Score=36.35  Aligned_cols=32  Identities=38%  Similarity=0.788  Sum_probs=24.2

Q ss_pred             cccccccccCCceeeccCCCCcccccCCCCCcC
Q 007129          285 DQCDNYALCGAYAVCNMNSNSAKCECLEGFVPK  317 (617)
Q Consensus       285 ~~C~~~~~CG~~g~C~~~~~~~~C~C~~Gf~~~  317 (617)
                      |+|. ...|...|.|......+.|.|++||...
T Consensus         1 D~C~-~~PC~ngg~C~~~~~~y~C~C~~G~~G~   32 (39)
T d1xkba1           1 DQCE-TSPCQNQGKCKDGLGEYTCTCLEGFEGK   32 (39)
T ss_dssp             CTTT-TCCCCSSCEECCCSSSCCEECCTTEETT
T ss_pred             CcCC-CCCCCCCcEEECCCCCEEEECCCCCCcC
Confidence            3465 4678899999765455689999999765

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.82  E-value=0.029  Score=34.02  Aligned_cols=34  Identities=32%  Similarity=0.722  Sum_probs=26.3

Q ss_pred             cccccccccCCceeeccCCCCcccccCCCCCcCCc
Q 007129          285 DQCDNYALCGAYAVCNMNSNSAKCECLEGFVPKSP  319 (617)
Q Consensus       285 ~~C~~~~~CG~~g~C~~~~~~~~C~C~~Gf~~~~~  319 (617)
                      |+|.+-..||. |.|+.--....|.|-.||+|-+.
T Consensus         2 dECsignpCGn-GTCtNviGgFec~C~~GFepgpm   35 (39)
T d1emoa2           2 DECSVGNPCGN-GTCKNVIGGFECTCEEGFEPGPM   35 (39)
T ss_dssp             CGGGTTCSSSS-SCEEECSSSEEECCSSSSCCCSS
T ss_pred             CccccCCccCC-ceeeecccceEEeecCCcCCCcc
Confidence            67999999996 88875333337999999999653

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.79  E-value=0.032  Score=35.53  Aligned_cols=32  Identities=22%  Similarity=0.533  Sum_probs=24.4

Q ss_pred             cccccccccCCceeeccCCCCcccccCCCCCcC
Q 007129          285 DQCDNYALCGAYAVCNMNSNSAKCECLEGFVPK  317 (617)
Q Consensus       285 ~~C~~~~~CG~~g~C~~~~~~~~C~C~~Gf~~~  317 (617)
                      |+|. ...|.+.|.|......+.|.|++||...
T Consensus         2 d~C~-~~PC~n~g~C~~~~~~y~C~C~~G~~G~   33 (39)
T d2vj3a2           2 NECV-SNPCQNDATCLDQIGEFQCICMPGYEGV   33 (39)
T ss_dssp             CTTT-TCCCCSSCEEEECSSCEEEECCTTEESS
T ss_pred             cCCc-CCCCCCCCEEECCCCCEEEeCCCCCccC
Confidence            4564 4679999999765555689999999765

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.57  E-value=0.034  Score=35.42  Aligned_cols=33  Identities=36%  Similarity=0.561  Sum_probs=25.5

Q ss_pred             ccccccccccCCceeeccCCCCcccccCCCCCcC
Q 007129          284 LDQCDNYALCGAYAVCNMNSNSAKCECLEGFVPK  317 (617)
Q Consensus       284 ~~~C~~~~~CG~~g~C~~~~~~~~C~C~~Gf~~~  317 (617)
                      .|+|. ...|-..|.|......++|.|++||+..
T Consensus         3 ~d~C~-~~PC~ngg~C~~~~~~y~C~C~~g~~G~   35 (39)
T d1edmb_           3 GDQCE-SNPCLNGGSCKDDINSYECWCPFGFEGK   35 (39)
T ss_dssp             CCTTT-TCCCCTTCEEEEETTEEEEECCTTCCST
T ss_pred             cccCC-CCCCCCCcEEEcCCCCEEEECCCCCCCC
Confidence            36676 5779999999765555689999999764

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.79  E-value=0.042  Score=34.52  Aligned_cols=32  Identities=31%  Similarity=0.594  Sum_probs=24.3

Q ss_pred             cccccccccCCceeeccCCCCcccccCCCCCcC
Q 007129          285 DQCDNYALCGAYAVCNMNSNSAKCECLEGFVPK  317 (617)
Q Consensus       285 ~~C~~~~~CG~~g~C~~~~~~~~C~C~~Gf~~~  317 (617)
                      |+|. ...|-..|.|......+.|.|++||+..
T Consensus         3 d~C~-~~PC~ngg~C~~~~~~y~C~C~~g~~G~   34 (37)
T d2c4fl1           3 DQCA-SSPCQNGGSCKDQLQSYICFCLPAFEGR   34 (37)
T ss_dssp             CGGG-GCCCCTTCEEEEETTEEEEECCTTEEST
T ss_pred             ccCC-CCCCCCCCEEECCCCCeEEECCCCCcCC
Confidence            4564 5678889999765455689999999764

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.55  E-value=0.045  Score=35.68  Aligned_cols=32  Identities=22%  Similarity=0.519  Sum_probs=24.7

Q ss_pred             cccccccccCCceeeccCCCCcccccCCCCCcC
Q 007129          285 DQCDNYALCGAYAVCNMNSNSAKCECLEGFVPK  317 (617)
Q Consensus       285 ~~C~~~~~CG~~g~C~~~~~~~~C~C~~Gf~~~  317 (617)
                      |+|..+..| -.+.|......+.|.|++||+..
T Consensus         4 dEC~~~~~~-c~~~C~Nt~G~y~C~C~~Gy~l~   35 (43)
T d1uzka1           4 NECLDPTTC-ISGNCVNTPGSYICDCPPDFELN   35 (43)
T ss_dssp             CGGGSTTSS-BTSEEEEETTEEEEECCTTCEEC
T ss_pred             cccCCCCcC-cCCEeECCCCCEEEecCCCCEEC
Confidence            678877665 46899765545589999999875

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.48  E-value=0.08  Score=34.41  Aligned_cols=32  Identities=25%  Similarity=0.590  Sum_probs=24.5

Q ss_pred             ccccccccccCCceeeccCCCCcccccCCCCCc
Q 007129          284 LDQCDNYALCGAYAVCNMNSNSAKCECLEGFVP  316 (617)
Q Consensus       284 ~~~C~~~~~CG~~g~C~~~~~~~~C~C~~Gf~~  316 (617)
                      .|+|..+. |+.++.|......+.|.|++||+.
T Consensus         5 idEC~~~~-~~~~~~C~Nt~Gsy~C~C~~Gy~~   36 (43)
T d1emoa1           5 MDECKEPD-VCKHGQCINTDGSYRCECPFGYIL   36 (43)
T ss_dssp             CCSSSSTT-SCSSSCCCCCSSCCCCCCCTTEEE
T ss_pred             eeccCCcC-CCCCCEeECCCCCeEeECCCCccc
Confidence            47897654 556889987655568999999976

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.47  E-value=0.069  Score=33.00  Aligned_cols=31  Identities=29%  Similarity=0.621  Sum_probs=22.7

Q ss_pred             ccccccccCCceeeccCCCCcccccCCCCCcC
Q 007129          286 QCDNYALCGAYAVCNMNSNSAKCECLEGFVPK  317 (617)
Q Consensus       286 ~C~~~~~CG~~g~C~~~~~~~~C~C~~Gf~~~  317 (617)
                      +|. ...|-..|.|......+.|.|++||...
T Consensus         2 ~C~-~~PC~ngg~C~~~~~~y~C~C~~g~~G~   32 (35)
T d2vj3a3           2 ECA-SSPCLHNGRCLDKINEFQCECPTGFTGH   32 (35)
T ss_dssp             TTT-TCCSTTTCEEEECSSCEEEECCTTEESS
T ss_pred             CCC-CCCCCCCcEEECCCCCeEEECCCCCCCC
Confidence            453 4668888999754445689999999764

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=88.60  E-value=0.58  Score=42.71  Aligned_cols=93  Identities=13%  Similarity=0.009  Sum_probs=61.0

Q ss_pred             HHHhccCCCCcceecccCceeEEEEEEcCCcEEEEeecccCchhhHHHHHHHHHHHHccC-CCcccceEEEEEeCCeEEE
Q 007129          499 IANATENFSDKNKLGEGGFGPVYKGVLIEGQEIAAKRLSKSSGQGMEEFENEVLLIAKLQ-HRNLVKLIGCCTQRDERML  577 (617)
Q Consensus       499 l~~at~~f~~~~~lG~G~fG~Vykg~l~~g~~vAvK~l~~~~~~~~~~f~~Ev~~l~~l~-H~nlv~l~g~~~~~~~~~l  577 (617)
                      +......+...+..+.++...||+... +++.+.+|+...........+.+|+..+..+. +--+.+++.+....+..++
T Consensus         9 l~~~~~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~l   87 (263)
T d1j7la_           9 LKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL   87 (263)
T ss_dssp             HHHHHTTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred             HHHhhhceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEE
Confidence            344444554433333333467998764 55667788776544444456778888777663 4446678888888889999


Q ss_pred             EEeccCCCCHHHHHh
Q 007129          578 IYEYLPNKSLNDFIF  592 (617)
Q Consensus       578 v~E~~~~GsL~~~L~  592 (617)
                      |||++++..+.+...
T Consensus        88 v~~~l~G~~~~~~~~  102 (263)
T d1j7la_          88 LMSEADGVLCSEEYE  102 (263)
T ss_dssp             EEECCSSEEHHHHTT
T ss_pred             EEEeccccccccccc
Confidence            999999988866543

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.54  E-value=0.094  Score=33.66  Aligned_cols=31  Identities=32%  Similarity=0.771  Sum_probs=23.3

Q ss_pred             cccccccccCCceeeccCCCCcccccCCCCCcC
Q 007129          285 DQCDNYALCGAYAVCNMNSNSAKCECLEGFVPK  317 (617)
Q Consensus       285 ~~C~~~~~CG~~g~C~~~~~~~~C~C~~Gf~~~  317 (617)
                      |+|..++.|.  .+|......+.|.|++||+..
T Consensus         2 dEC~~~~~C~--~~C~n~~Gsy~C~C~~Gy~L~   32 (41)
T d1i0ua2           2 DECQDPDTCS--QLCVNLEGGYKCQCEEGFQLD   32 (41)
T ss_dssp             CTTTTTTSCS--SCEECSSSCCEECCCTTEEEC
T ss_pred             ccCCCCCCCC--CEeECCCCCEEeECCCCCeEC
Confidence            5787777774  489765555589999999875

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.37  E-value=0.1  Score=33.99  Aligned_cols=33  Identities=30%  Similarity=0.705  Sum_probs=23.8

Q ss_pred             cccccc-cccCCceeeccCCCCcccccCCCCCcCC
Q 007129          285 DQCDNY-ALCGAYAVCNMNSNSAKCECLEGFVPKS  318 (617)
Q Consensus       285 ~~C~~~-~~CG~~g~C~~~~~~~~C~C~~Gf~~~~  318 (617)
                      |+|... ..|. ++.|......+.|.|++||+...
T Consensus         4 dEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~~~~   37 (44)
T d1lmja1           4 DECRISPDLCG-RGQCVNTPGDFECKCDEGYESGF   37 (44)
T ss_dssp             CTTTTCSSTTT-TSCEEEETTEEEECCCSSEEECT
T ss_pred             cccCCCCCCCC-CCEeEcCCCCeEEeCCCCCccCC
Confidence            678764 4564 68997655556899999998653

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.19  E-value=0.17  Score=33.55  Aligned_cols=33  Identities=24%  Similarity=0.659  Sum_probs=24.8

Q ss_pred             cccccccccccCCceeeccCCCCcccccCCCCCcC
Q 007129          283 ILDQCDNYALCGAYAVCNMNSNSAKCECLEGFVPK  317 (617)
Q Consensus       283 ~~~~C~~~~~CG~~g~C~~~~~~~~C~C~~Gf~~~  317 (617)
                      +.++|.- ..|.. |.|......+.|.|++||...
T Consensus         7 ~~~~C~~-~PC~n-G~C~~~~~~y~C~C~~G~~G~   39 (48)
T d1autl1           7 LEHPCAS-LCCGH-GTCIDGIGSFSCDCRSGWEGR   39 (48)
T ss_dssp             SCCSSSS-TTTTS-EEECCCSSCCCEEECTTEEST
T ss_pred             CCCcccC-CCCCC-CEEECCCCCCeEeCCCCCcCC
Confidence            4567875 77975 999765445699999999765

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.17  E-value=0.063  Score=34.74  Aligned_cols=33  Identities=33%  Similarity=0.712  Sum_probs=23.6

Q ss_pred             ccccc-ccccCCceeeccCCCCcccccCCCCCcCC
Q 007129          285 DQCDN-YALCGAYAVCNMNSNSAKCECLEGFVPKS  318 (617)
Q Consensus       285 ~~C~~-~~~CG~~g~C~~~~~~~~C~C~~Gf~~~~  318 (617)
                      |+|.. ++.|. +++|......+.|.|++||+...
T Consensus         3 dEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~l~~   36 (42)
T d1lmja2           3 DECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLSP   36 (42)
T ss_dssp             CHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCCS
T ss_pred             cccCCCCCCCC-CCEeECCCCCeEEeCCCCCeECc
Confidence            45643 56674 78998665556899999998753

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.83  E-value=0.081  Score=33.68  Aligned_cols=31  Identities=26%  Similarity=0.619  Sum_probs=23.3

Q ss_pred             cccccccccCCceeeccCCCCcccccCCCCCcC
Q 007129          285 DQCDNYALCGAYAVCNMNSNSAKCECLEGFVPK  317 (617)
Q Consensus       285 ~~C~~~~~CG~~g~C~~~~~~~~C~C~~Gf~~~  317 (617)
                      |+|...+.|.  .+|......+.|.|+|||+..
T Consensus         3 dEC~~~~~C~--~~C~N~~Gsy~C~C~~Gy~l~   33 (40)
T d1dx5i3           3 DECENGGFCS--GVCHNLPGTFECICGPDSALA   33 (40)
T ss_dssp             CHHHHCSSCS--SEEEECSSSEEEEECSSSSCE
T ss_pred             cccCCCcCcc--CEeeCCCCCeEeECCCCCeeC
Confidence            5677766674  589766555689999999875

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.81  E-value=0.11  Score=33.03  Aligned_cols=29  Identities=21%  Similarity=0.465  Sum_probs=21.9

Q ss_pred             ccccCCceeeccCCCCcccccCCCCCcCC
Q 007129          290 YALCGAYAVCNMNSNSAKCECLEGFVPKS  318 (617)
Q Consensus       290 ~~~CG~~g~C~~~~~~~~C~C~~Gf~~~~  318 (617)
                      +..|-..|.|......+.|.|++||....
T Consensus         6 ~~pC~ngg~C~~~~~~y~C~C~~g~~G~~   34 (40)
T d1g1sa2           6 DMSCSKQGECLETIGNYTCSCYPGFYGPE   34 (40)
T ss_dssp             TTGGGGSEEEEECSSSEEEEECTTEESTT
T ss_pred             CCcCCCCcEEECCCCCeEEeCCCCccCCC
Confidence            35688888897654556899999997753

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.56  E-value=0.075  Score=33.72  Aligned_cols=31  Identities=26%  Similarity=0.585  Sum_probs=23.4

Q ss_pred             ccccccccCCceeeccCCCCcccccCCCCCcC
Q 007129          286 QCDNYALCGAYAVCNMNSNSAKCECLEGFVPK  317 (617)
Q Consensus       286 ~C~~~~~CG~~g~C~~~~~~~~C~C~~Gf~~~  317 (617)
                      .|. +..|...|.|......+.|.|++||...
T Consensus         3 ~C~-~~pC~ngg~C~~~~~~~~C~C~~g~~G~   33 (39)
T d1g1ta2           3 ACT-NTSCSGHGECVETINNYTCKCDPGFSGL   33 (39)
T ss_dssp             CCC-TTGGGGSEEEEEETTEEEEEECTTEEST
T ss_pred             ccc-CCcCCCCcEEECCCCCEEEeCCCCCcCc
Confidence            454 4678999999755445589999999775

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.47  E-value=0.11  Score=33.75  Aligned_cols=33  Identities=27%  Similarity=0.634  Sum_probs=24.5

Q ss_pred             ccccc-ccccCCceeeccCCCCcccccCCCCCcCC
Q 007129          285 DQCDN-YALCGAYAVCNMNSNSAKCECLEGFVPKS  318 (617)
Q Consensus       285 ~~C~~-~~~CG~~g~C~~~~~~~~C~C~~Gf~~~~  318 (617)
                      |+|.. ++.|. ++.|......+.|.|++||....
T Consensus         4 nEC~~~~~~c~-~~~C~Nt~Gsy~C~C~~Gy~l~~   37 (43)
T d1uzka2           4 DECQELPGLCQ-GGKCINTFGSFQCRCPTGYYLNE   37 (43)
T ss_dssp             CHHHHCGGGGB-TSEEEECSSCEEEECCTTCCBCT
T ss_pred             ccccCCCCCcC-CCEEECCCCCeEeECCCCCeECc
Confidence            56753 56675 68998765566899999998753

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.20  E-value=0.2  Score=34.00  Aligned_cols=32  Identities=13%  Similarity=0.276  Sum_probs=22.6

Q ss_pred             ccccccccCCceeeccCCCCcccccCCCCCcC
Q 007129          286 QCDNYALCGAYAVCNMNSNSAKCECLEGFVPK  317 (617)
Q Consensus       286 ~C~~~~~CG~~g~C~~~~~~~~C~C~~Gf~~~  317 (617)
                      .|.....|+...+|......+.|+|++||+..
T Consensus        13 ~c~~~~~~~c~~~C~Nt~GsY~C~C~~Gy~l~   44 (53)
T d1apqa_          13 SGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQ   44 (53)
T ss_dssp             TCCCSSSCTTSSEEEEETTEEEEECSTTCEEC
T ss_pred             CcccCCCCCccCEeEcCCCCeEeECCCCCeEC
Confidence            34444555666689766555689999999865

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=84.16  E-value=0.14  Score=32.62  Aligned_cols=27  Identities=19%  Similarity=0.520  Sum_probs=21.0

Q ss_pred             cccCCceeeccCCCCcccccCCCCCcC
Q 007129          291 ALCGAYAVCNMNSNSAKCECLEGFVPK  317 (617)
Q Consensus       291 ~~CG~~g~C~~~~~~~~C~C~~Gf~~~  317 (617)
                      ..|.++..|......+.|.|.+||...
T Consensus         7 ~~C~~~A~C~Nt~Gsy~C~C~~Gy~Gd   33 (40)
T d1gl4a2           7 HQCSVHAECRDYATGFCCRCVANYTGN   33 (40)
T ss_dssp             GGSCTTEEEEECSSCEEEEECTTEEEC
T ss_pred             CCCCCCCEeecCCCCeEeECCCCCcCC
Confidence            458889999765445689999999764

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=81.53  E-value=0.43  Score=32.29  Aligned_cols=31  Identities=23%  Similarity=0.485  Sum_probs=23.2

Q ss_pred             ccccccCCceeecc--CCCCcccccCCCCCcCC
Q 007129          288 DNYALCGAYAVCNM--NSNSAKCECLEGFVPKS  318 (617)
Q Consensus       288 ~~~~~CG~~g~C~~--~~~~~~C~C~~Gf~~~~  318 (617)
                      ...+.|-..|.|..  ....+.|.|++||....
T Consensus         9 c~~~~C~NgG~C~~~~~~~~~~C~C~~gy~G~~   41 (53)
T d3egfa_           9 SYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDR   41 (53)
T ss_dssp             TSSCCSCSSCEEEEESSSSCEEEECCTTCCSSS
T ss_pred             CCCCCCCCCcEeeccCCCCCeEeECCCCCcCCC
Confidence            34678999999963  23345899999997753

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=80.62  E-value=0.26  Score=31.63  Aligned_cols=34  Identities=21%  Similarity=0.602  Sum_probs=24.3

Q ss_pred             cccccccccccCCceeeccC-CCCcccccCC-CCCcC
Q 007129          283 ILDQCDNYALCGAYAVCNMN-SNSAKCECLE-GFVPK  317 (617)
Q Consensus       283 ~~~~C~~~~~CG~~g~C~~~-~~~~~C~C~~-Gf~~~  317 (617)
                      |.|+|. ...|...|.|... ...+.|.|++ ||...
T Consensus         1 Pid~C~-~nPC~ngG~C~~~~~~~y~C~C~~~G~~G~   36 (42)
T d1q4ga2           1 PVNPCC-YYPCQHQGICVRFGLDRYQCDCTRTGYSGP   36 (42)
T ss_dssp             CCCGGG-GCCCCTTCEEEEETTTEEEEECTTSSEETT
T ss_pred             CCccCc-CCCCCCCCEeeeCCCCCEEEECCCCCcCCc
Confidence            346676 4789999999642 3345899986 88765